BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11827
(336 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328720558|ref|XP_001942954.2| PREDICTED: exonuclease 1-like [Acyrthosiphon pisum]
Length = 675
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/320 (47%), Positives = 212/320 (66%), Gaps = 26/320 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+++ MLL IK I+VFDG+HLPAK TE RRK R+ ++ KAAEL+ LD+G EA S L
Sbjct: 60 MRFVSMLLDQNIKPILVFDGQHLPAKADTESKRRKLREENRKKAAELMRLDKGKEASSLL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+S+DVTHKMALN+I+ CR VDCIVAP+EAD+Q+AYLN++G A VITEDSDLL+FG
Sbjct: 120 RRSIDVTHKMALNLIKRCREINVDCIVAPYEADSQLAYLNLSGIAHIVITEDSDLLLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K++++KLD +G +++EK+ ++ + +F+ KFRYMCILSGCDY + G+GL KA
Sbjct: 180 KRVLFKLDQNGAGILIEQEKIHLSMNIKPEQFSFDKFRYMCILSGCDYLPSVPGVGLVKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYV--KITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
+ ++ +PD AL ++GS+V KI E+ F + + MF YQPV+DP+S+
Sbjct: 240 RQFITRTSEPDIYKALL------RLGSFVNIKIPPEYRDQFMDADRMFQYQPVFDPLSRR 293
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPV 298
++PLN + + S+L+ DQA+QLALGN+DP SLE +D W+PD +
Sbjct: 294 IIPLNDISDSNLPVLVSKLTC-------DQAYQLALGNIDPISLEVVDSWDPDIQLTPDK 346
Query: 299 T-----------SIWSKQYE 307
SIWSK Y+
Sbjct: 347 VVKKKIIQARHKSIWSKDYQ 366
>gi|357603281|gb|EHJ63691.1| exonuclease [Danaus plexippus]
Length = 654
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 217/350 (62%), Gaps = 26/350 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ ML + IK I+VFDGRHLPAK TE RR+ RD K +AAELL L + EA+S +
Sbjct: 60 LKYVTMLQSRNIKPILVFDGRHLPAKAMTELKRRETRDISKKRAAELLSLGKIDEARSFM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+SVD+TH MAL +I+ CR R +DCIVAP+EADAQ+AYLNI YA VITEDSDL++FG
Sbjct: 120 RRSVDITHAMALALIKECRKRNIDCIVAPYEADAQLAYLNIKNYAQLVITEDSDLILFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++K+DL GN ++ KLP +K P+ +T KFR MCILSGCDY + G+GL KA
Sbjct: 180 TKVLFKMDLEGNGTLVETIKLPLVMKCPIEHYTFDKFRRMCILSGCDYLNSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +V + D +F NAL+K+ + ++++ ++ +F F +Q VYDP + +
Sbjct: 240 RQFVNASQDTNFANALKKLPSF--FNRSLQVSDDYRENFLKAEATFKHQYVYDPSQRCMT 297
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ-AFQLALGNLDPFSLEEMDQWNPDSEENLP-- 297
L P+ E E+ + L EL Q AFQLALGNLDPF+L++MD W+PDS ++
Sbjct: 298 RLTPVYDE---EIEAALCSNAGELLDPQIAFQLALGNLDPFTLKKMDNWDPDSRSDVTDH 354
Query: 298 -------------VTSIWSKQYEKPCDRHSSEESVSEPPVFQKLKPVASS 334
SIWS+ Y++ D ES QK +P+ S+
Sbjct: 355 IRSSNWKDAGVSNKPSIWSESYKEYLD-----ESQPWMKKVQKQEPIIST 399
>gi|340709250|ref|XP_003393224.1| PREDICTED: exonuclease 1-like [Bombus terrestris]
Length = 725
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 208/306 (67%), Gaps = 5/306 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+IHMLL+HKI+ I+VFDGRHLPAK TE RR+ R +++ K EL+ + + +E ++ L
Sbjct: 60 MKFIHMLLSHKIRPILVFDGRHLPAKAQTEVKRRENRQTNRRKGIELMQMGQHAEGRNLL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+S+DVTH+MAL +I+ C +DCIVAP+EADAQ+AYLNI G AD VITEDSDL++FG
Sbjct: 120 RRSIDVTHEMALELIKQCHEMNIDCIVAPYEADAQLAYLNINGIADVVITEDSDLILFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+++K+DL+GN +D+E+L A+++P F F YMCILSGCDY + G+GL KA
Sbjct: 180 KKVLFKMDLTGNGLLVDQEQLHLAMEIPSKHFNMDDFCYMCILSGCDYLPSLPGIGLNKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ D D AL ++ Y + S V +TKE+ SF + F +Q V+ P+ ++ V
Sbjct: 240 RKFIKLNKDCDIHKALTRLGSYLNMKSLV-VTKEYRDSFILAVITFKHQLVFCPLKRKQV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-EENLPVT 299
L P S++ +E QL L++ D A QLALGN DPF+L+ + +NPD E+ +
Sbjct: 299 RLTPPTSDVTEE---QLYYAGLQIDPDIALQLALGNCDPFTLKTLHNFNPDKIEDEVNKC 355
Query: 300 SIWSKQ 305
+IW+++
Sbjct: 356 NIWTQK 361
>gi|347972009|ref|XP_313789.5| AGAP004491-PA [Anopheles gambiae str. PEST]
gi|333469129|gb|EAA09057.6| AGAP004491-PA [Anopheles gambiae str. PEST]
Length = 861
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/313 (47%), Positives = 202/313 (64%), Gaps = 11/313 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ +LL+H IK I+VFDG+HLPAK ATE RR+ R++ + + AELL L R EA+S L
Sbjct: 60 LKYVQLLLSHNIKPILVFDGQHLPAKAATEAKRREIRETARKRGAELLRLGRIDEARSFL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VD+TH+MAL ++Q CR RGVDCIVAP+EADAQ+AYLN A YVITEDSDL++FG
Sbjct: 120 RRCVDITHEMALQLMQECRKRGVDCIVAPYEADAQLAYLNRTDIAQYVITEDSDLVLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+I++KLDL+G+ ++ KL A+ ++ AKFRYMCILSGCDY + G+GL KA
Sbjct: 180 NRILFKLDLTGHGRLVEASKLHLAMGCREDRYKFAKFRYMCILSGCDYLDSLPGIGLGKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ DPD AL KI Y + + +T+E+ F + F + VYDPV +
Sbjct: 240 CKFMLKTEDPDIRRALAKIPAYLNM-RQLSVTEEYKDEFLKADATFKHMVVYDPVQRRQT 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L + E E + + K L+ + AFQLA+GNLDPFSL +MD W+PD E ++ V
Sbjct: 299 RLVDPDDEGTPEQYCCNAGKFLD--EKVAFQLAVGNLDPFSLRKMDDWHPD-EADVDVAA 355
Query: 300 ------SIWSKQY 306
SIW K Y
Sbjct: 356 GKNQHPSIWRKDY 368
>gi|157112576|ref|XP_001657573.1| exonuclease [Aedes aegypti]
gi|108878018|gb|EAT42243.1| AAEL006209-PA [Aedes aegypti]
Length = 770
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/293 (47%), Positives = 195/293 (66%), Gaps = 5/293 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL+H IK I+VFDGRHLPAK TE RR+ RD+ + +AAELL + + EA+S+L
Sbjct: 60 LKYVNMLLSHDIKPILVFDGRHLPAKAMTEAKRRESRDNSRKRAAELLRVGKTEEAKSYL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VD+TH+MAL +IQ CR R VDC+VAP+EADAQ+AYLN G A VITEDSDL++FG
Sbjct: 120 RRCVDITHEMALQLIQECRRRNVDCVVAPYEADAQLAYLNRKGIAQAVITEDSDLMLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++KLDL+G ++ EKL A+ K+T KFRYMCILSGCDY + G+GL KA
Sbjct: 180 SKVLFKLDLTGTGLMIEAEKLYLAMGCKEEKYTFDKFRYMCILSGCDYLESLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
K +V + D D AL KI Y + +++++++ F + F + V+DPV ++
Sbjct: 240 KKFVLTTEDTDIRRALSKIPAYLNM-RQLEVSEQYKEEFMKADATFKHMVVFDPVERKQA 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ-AFQLALGNLDPFSLEEMDQWNPDS 292
LN S+M L D+ A +LALGNL+PFS++ +D W+PDS
Sbjct: 299 RLNE-PSDM--GTHPDLCCNAGNFLDDETALELALGNLNPFSMKRLDNWHPDS 348
>gi|195484202|ref|XP_002090593.1| GE12717 [Drosophila yakuba]
gi|194176694|gb|EDW90305.1| GE12717 [Drosophila yakuba]
Length = 730
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 199/314 (63%), Gaps = 9/314 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAELL L R EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH MAL +I+ CR+R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNKADVAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KNIIFKLDLNGSGLLVEAEKLHLAMGCNEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D + ALRKI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQDDMQIALRKIPSYLNMRN-LEVNDDYIENFMKAEATFKHMFIYNPLERRMQ 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L PLE DE + + LE +QA LALGNL+PFS++ +D W P+ P
Sbjct: 299 RLCPLEDYGTDERYCSNAGTLLE-DSEQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNV 357
Query: 300 ------SIWSKQYE 307
SIW ++
Sbjct: 358 KRSKHKSIWQTNFQ 371
>gi|345486309|ref|XP_001603157.2| PREDICTED: exonuclease 1-like [Nasonia vitripennis]
Length = 730
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 207/315 (65%), Gaps = 8/315 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL H IK I+VFDGRHLPAK TE RR+ R++++ +AAEL+ + + +E ++ L
Sbjct: 60 MKFVNMLLGHNIKPILVFDGRHLPAKAETEVKRRESREANRKRAAELIKMGKITEGKNLL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+S+DV+HKMAL V++ C+A VDCIVAP+EADAQ+AYLNI+G D VITEDSDL +FG
Sbjct: 120 RRSLDVSHKMALEVMKECQAHNVDCIVAPYEADAQLAYLNISGIVDVVITEDSDLTLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KKI +K+D+ G +++++L A+ + L F KFR+MCILSGCDY + G+GL KA
Sbjct: 180 KKIFFKMDMYGYGVLVEQDRLHLAMGLRLPDFHMDKFRHMCILSGCDYLASLPGIGLNKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D + NAL ++ + S V +TKE+ F F +Q VY P+ ++ V
Sbjct: 240 CKFIVKNTDDNIYNALLRLASSLNMKSLV-VTKEYRDGFMRALATFKHQLVYCPLQRKQV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
LNPL ++ +E QL+ E+ + A+QLALGN DPFS E + ++PD + L T+
Sbjct: 299 RLNPLTPDITEE---QLTHAGSEVDEQLAWQLALGNCDPFSKEMLHNFDPD-KPRLRRTN 354
Query: 301 IWSKQYEKPCDRHSS 315
WS E RH S
Sbjct: 355 SWS---ETAIARHQS 366
>gi|195115002|ref|XP_002002056.1| GI14203 [Drosophila mojavensis]
gi|193912631|gb|EDW11498.1| GI14203 [Drosophila mojavensis]
Length = 661
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 200/318 (62%), Gaps = 15/318 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++ ML+++ IKVI+VFDG+HLPAK TE+ RR+ R + +A ELL L R EA+S +
Sbjct: 60 MKFVQMLMSYDIKVILVFDGQHLPAKALTEQRRREARQQSQKRAKELLRLGRVEEARSQM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH+MAL +IQ CR R VDCIVAP+EADAQMA+LN AG A+Y+ITEDSDL +FGA
Sbjct: 120 RRGVDVTHEMALRLIQRCRERNVDCIVAPYEADAQMAWLNKAGIAEYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+K+I+KLDL+GN ++ +K A+ ++ KFR MCILSGCDY + G+GL KA
Sbjct: 180 EKVIFKLDLNGNGLLVEADKFHLAMGCSKERYHFEKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ K +
Sbjct: 240 CKFILKTEQDDMRIALKKIPQYLNMRN-LEVDDDYIENFMKAEATFKHMYIYNPLEKRME 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPV-- 298
L+ LE DE + + L ++A QLALGNL+PF+L+ +D W+PD L
Sbjct: 299 RLHALEDYETDERYCS-NAGSLLTDSEKAMQLALGNLNPFTLKTLDNWHPDQATQLATKA 357
Query: 299 -----------TSIWSKQ 305
SIW K+
Sbjct: 358 ASANAIKRSKHKSIWQKE 375
>gi|312378187|gb|EFR24829.1| hypothetical protein AND_10346 [Anopheles darlingi]
Length = 835
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/292 (47%), Positives = 189/292 (64%), Gaps = 5/292 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ +LL++ IK I+VFDGRHLPAK TE RR+ R++ + + AELL L R EA+S L
Sbjct: 60 LKYVQLLLSYNIKPILVFDGRHLPAKAGTEAKRRESRENARKRGAELLRLGRIDEARSFL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VD+TH+MAL +IQ CR R VDC+VAP+EADAQ+A+LN A A YVITEDSDL++FG
Sbjct: 120 RRCVDITHEMALQLIQECRKRNVDCVVAPYEADAQLAFLNRADIAQYVITEDSDLVLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+I++KLDL+GN ++ KL A+ ++ KFR MCILSGCDY + G+GL KA
Sbjct: 180 SRILFKLDLAGNGRLVEATKLHLAMGCREERYQFVKFRQMCILSGCDYLESLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ DPD + AL KI Y + V +++E+ F F + VYDP+ +
Sbjct: 240 CRFILKTEDPDMKRALAKIPAYLNMRQLV-VSEEYKIEFLKAEATFKHMVVYDPIERRQK 298
Query: 241 PL-NPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
L +PL+ +E + L +D AF LALGNLDPFSL +D W+PD
Sbjct: 299 RLTDPLDEGTPEEYCCNAGVF---LDEDTAFNLALGNLDPFSLRLLDDWHPD 347
>gi|15291899|gb|AAK93218.1| LD31018p [Drosophila melanogaster]
Length = 732
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 197/314 (62%), Gaps = 9/314 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAELL L R EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH MAL +I+ CR+R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMRIALKKIPSYLNMRN-LEVDDDYIENFMKAEATFRHMFIYNPLERRMQ 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L LE DE + + LE +QA LALGNL+PFS++ +D W P+ P
Sbjct: 299 RLCALEDYETDERYCSNAGTLLE-DSEQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNV 357
Query: 300 ------SIWSKQYE 307
SIW ++
Sbjct: 358 KRSKHKSIWQTNFQ 371
>gi|195035513|ref|XP_001989222.1| GH10168 [Drosophila grimshawi]
gi|193905222|gb|EDW04089.1| GH10168 [Drosophila grimshawi]
Length = 631
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 203/323 (62%), Gaps = 3/323 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ +L+++ IK I+VFDG+HLPAK TE+ RR+ R K +AAELL L R EA+S +
Sbjct: 60 LKYVQLLVSYNIKPILVFDGQHLPAKALTEQRRRESRQQSKKRAAELLRLGRVEEARSQM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH+MAL +I CR +DCIVAP+EADAQMA+LN AG A Y++TEDSDL +FGA
Sbjct: 120 RRCVDVTHEMALRLIHECRELKIDCIVAPYEADAQMAWLNRAGIAQYIVTEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++II+KLDLSG +D EKL A+ +F KFR MCILSGCDY + G+GL KA
Sbjct: 180 QRIIFKLDLSGAGLLVDAEKLHLAMGCREERFQFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ ++ +F F + +Y+P+ + +
Sbjct: 240 CKFMLKTEQDDMRIALKKIPQYLNMRN-LEVDDAYIENFMKAEATFKHMYIYNPLERRME 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-EENLPVT 299
L+ LE+ DE + + L +QA LALGNL+PF+L+ +D W+PD + P
Sbjct: 299 RLSALENNETDESYCS-NAGSLLADNEQALHLALGNLNPFTLKRLDNWHPDRVDATKPAK 357
Query: 300 SIWSKQYEKPCDRHSSEESVSEP 322
I +++ +S +E V +P
Sbjct: 358 HIKHSKHKSIWQSNSHQELVEQP 380
>gi|17137168|ref|NP_477145.1| tosca [Drosophila melanogaster]
gi|74873405|sp|Q24558.1|EXO1_DROME RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I; AltName:
Full=Protein tosca
gi|1419491|emb|CAA61431.1| Tosca [Drosophila melanogaster]
gi|7298467|gb|AAF53687.1| tosca [Drosophila melanogaster]
gi|223029525|gb|ACM78484.1| FI07641p [Drosophila melanogaster]
Length = 732
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 197/314 (62%), Gaps = 9/314 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAELL L R EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH MAL +I+ CR+R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMRIALKKIPSYLNMRN-LEVDDDYIENFMKAEATFRHMFIYNPLERRMQ 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L LE DE + + LE +QA LALGNL+PFS++ +D W P+ P
Sbjct: 299 RLCALEDYETDERYCSNAGTLLE-DSEQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNV 357
Query: 300 ------SIWSKQYE 307
SIW ++
Sbjct: 358 KRSKHKSIWQTNFQ 371
>gi|1419489|emb|CAA61430.1| Tosca [Drosophila melanogaster]
Length = 732
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 196/314 (62%), Gaps = 9/314 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAELL L R EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH M L +I+ CR+R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMTLRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMRIALKKIPSYLNMRN-LEVDDDYIENFMKAEATFRHMFIYNPLERRMQ 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L LE DE + + LE +QA LALGNL+PFS++ +D W P+ P
Sbjct: 299 RLCALEDYETDERYCSNAGTLLE-DSEQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNV 357
Query: 300 ------SIWSKQYE 307
SIW ++
Sbjct: 358 KRSKHKSIWQTNFQ 371
>gi|195344874|ref|XP_002039001.1| GM17073 [Drosophila sechellia]
gi|194134131|gb|EDW55647.1| GM17073 [Drosophila sechellia]
Length = 732
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 196/314 (62%), Gaps = 9/314 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAELL L R EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH MAL +I+ CR+R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMRIALKKIPSYLNMRN-LEVDDDYIENFMKAEATFRHMFIYNPLERRMQ 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L LE DE + + LE QA LALGNL+PFS++ +D W P+ P
Sbjct: 299 RLCALEDYETDERYCSNAGTLLE-DSVQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNV 357
Query: 300 ------SIWSKQYE 307
SIW ++
Sbjct: 358 KRSKHKSIWQTNFQ 371
>gi|194758777|ref|XP_001961635.1| GF14831 [Drosophila ananassae]
gi|190615332|gb|EDV30856.1| GF14831 [Drosophila ananassae]
Length = 714
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 196/315 (62%), Gaps = 9/315 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ MLL++ IK I+VFDG+HLPAK TE+ RR+ R K KAAELL R EA+SH+
Sbjct: 60 LKYVQMLLSYDIKPILVFDGQHLPAKALTEKRRRESRKQSKEKAAELLRRGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH MAL +I+ CR R +DCIVAP+EADAQMA+LN A A+++ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMALRLIKECRMRNIDCIVAPYEADAQMAWLNKADIAEFIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KKII+KLDL+GN ++ KL A+ + KFR MCILSGCDY + G+GL KA
Sbjct: 180 KKIIFKLDLNGNGLLVEAHKLHLAMGCREENYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI + + +++ E++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMHIALKKIPSTLNMRN-LEVADEYIENFLKAEATFKHMYIYNPLERRME 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L LE DE + + LE KDQA LALGN++PFSL+ +D W P+ P
Sbjct: 299 RLCALEDFETDERYCSNAGTLLE-DKDQALHLALGNINPFSLKRLDSWTPEKPVPTPKNI 357
Query: 300 ------SIWSKQYEK 308
SIW ++ K
Sbjct: 358 KRAKHKSIWQGEFLK 372
>gi|194880099|ref|XP_001974365.1| GG21694 [Drosophila erecta]
gi|190657552|gb|EDV54765.1| GG21694 [Drosophila erecta]
Length = 732
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 196/314 (62%), Gaps = 9/314 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAELL L R EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRVSRKQSKERAAELLRLGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH MAL +I+ CR+R VDCIVAP+EADAQMA+LN A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNKVDVAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KNIIFKLDLNGSGLLVEAEKLHLAMGCKEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMRIALKKIPSYLNMRN-LEVDDDYIENFMKAEATFKHMFIYNPLERRMQ 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L LE DE + + LE +QA LALGNL+PFS++ +D W P+ P
Sbjct: 299 RLCALEDYETDERYCSNAGTLLE-DSEQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNV 357
Query: 300 ------SIWSKQYE 307
SIW ++
Sbjct: 358 KRSKHKSIWQTNFQ 371
>gi|380014181|ref|XP_003691118.1| PREDICTED: exonuclease 1-like [Apis florea]
Length = 646
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 207/310 (66%), Gaps = 5/310 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+I+MLL++KI I+VFDG+HLPAK TE RR+ R +++ KA EL+ + + +EA++ +
Sbjct: 60 MKFIYMLLSYKITPILVFDGKHLPAKAETEAKRRENRQTNRRKANELIQMGQHAEAKNLI 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++S+DVTH+MAL +I+ C+ +DCIVAP+EADAQ+AYLNI D VITEDSDL++FG
Sbjct: 120 KRSIDVTHEMALKLIKECQKMNIDCIVAPYEADAQLAYLNINRIVDVVITEDSDLILFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KKI++K+D++GN +D+E+L A+ + F+ KF YMCILSGCDY + G+GL KA
Sbjct: 180 KKILFKMDVNGNGLLIDQEQLHLAMDVHSEHFSMDKFLYMCILSGCDYLPSLPGIGLNKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
K ++ D D AL ++ Y + S V ++ ++ SF + F +Q V+ P+ ++ V
Sbjct: 240 KKFISRNTDCDIYRALTRLGSYLNMKSLV-VSNKYRDSFILAVITFKHQLVFCPLKRKQV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-EENLPVT 299
LNP M D QL E D A QLALGN DPF+L+++ ++PD+ ++ +
Sbjct: 299 RLNP---PMPDITNEQLYYAGTETDPDTALQLALGNFDPFTLKKLHNFDPDNIKDQVNKH 355
Query: 300 SIWSKQYEKP 309
+IW+++ + P
Sbjct: 356 NIWTQKSKLP 365
>gi|307198944|gb|EFN79696.1| Exonuclease 1 [Harpegnathos saltator]
Length = 1355
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 208/319 (65%), Gaps = 16/319 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+I+MLL H IK I+VFDGR LPAK+ TE RR+ R ++ KA EL+ + + +E ++ L
Sbjct: 60 MKFINMLLRHDIKPILVFDGRQLPAKKKTEVKRREARQMNRRKALELIKMGQDAEGKNLL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+TH+MAL +I+ C++ +DCIVAP+EADAQ+AYLNI+G AD VITEDSDL +FG
Sbjct: 120 KRAIDITHEMALELIKYCQSENIDCIVAPYEADAQLAYLNISGIADVVITEDSDLTLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KKI++K+D +G+ ++++ L A+ M +F KFRY+CILSGCDY + G+GL KA
Sbjct: 180 KKILFKMDFNGHGVLIEQDLLHLAMDMRSEQFNMDKFRYICILSGCDYLPSLPGIGLGKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ DP+ AL ++ + S +++T+E+ +F ++ F +Q V+ P+ ++ V
Sbjct: 240 RKFITRNTDPNIHKALTRVGSVLNMKS-LEVTQEYRDAFILADITFRHQLVFCPLQRKQV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEE------ 294
LNP +++ ++ QL EL D A QLALGN DP +L+ + +NPD E
Sbjct: 299 RLNPPTADITED---QLCYAGQELDADLALQLALGNCDPCTLKMLHDFNPDKIERKRKRS 355
Query: 295 ------NLPVTSIWSKQYE 307
+ SIWS +YE
Sbjct: 356 TGTGRVTMNHASIWSSKYE 374
>gi|195437805|ref|XP_002066830.1| GK24343 [Drosophila willistoni]
gi|194162915|gb|EDW77816.1| GK24343 [Drosophila willistoni]
Length = 701
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 191/290 (65%), Gaps = 2/290 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ MLL++ IK ++VFDG+HLPAK TE+ RR+ R K +AAELL L R EA+S +
Sbjct: 60 LKYVQMLLSYDIKPVLVFDGQHLPAKALTEKRRRENRQQSKKRAAELLRLGRVEEARSQM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH+MAL +IQACR R VDCIVAP+EADAQMA+LN A Y++TEDSDL +FGA
Sbjct: 120 RRCVDVTHEMALRLIQACRERNVDCIVAPYEADAQMAWLNKAEIVQYIVTEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I+KLDL+GN ++ +KL A+ ++ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KKVIFKLDLTGNGLLVEADKLHLAMSCREDRYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMRKALKKIPQYLNMRN-LEVDDDYIENFLKAEATFKHMFIYNPLERRME 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
LN LE + +V + L +A+ LALGNL+PF+L+ +D W+P
Sbjct: 299 RLNALE-DFETDVSLCSNAGTLLADSQEAYHLALGNLNPFTLKRLDNWDP 347
>gi|125986267|ref|XP_001356897.1| GA10293 [Drosophila pseudoobscura pseudoobscura]
gi|54645223|gb|EAL33963.1| GA10293 [Drosophila pseudoobscura pseudoobscura]
Length = 709
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/290 (47%), Positives = 188/290 (64%), Gaps = 2/290 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KYI MLL++ IK I+VFDG+HLPAK TE+ RR+ R K +AAELL L R EA+S +
Sbjct: 60 LKYIQMLLSYDIKPILVFDGQHLPAKALTEKRRRESRQQSKQRAAELLRLGRVEEARSQM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH+MAL +I+ CR R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHEMALRLIRECRNRNVDCIVAPYEADAQMAWLNKANIAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I+KLDL+G ++ +KL A+ AK+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KKVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + S +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFMLKTEQDDMRIALKKIPSYLNM-SKLEVDDDYIENFMKAEATFKHMFIYNPLQRRME 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
L LE DE + + LE A LALGNL+PFSL+ +D W P
Sbjct: 299 RLCALEEYETDESYCSNAGTLLE-DSHLALHLALGNLNPFSLKRLDSWEP 347
>gi|195148683|ref|XP_002015297.1| GL18496 [Drosophila persimilis]
gi|194107250|gb|EDW29293.1| GL18496 [Drosophila persimilis]
Length = 709
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/290 (47%), Positives = 188/290 (64%), Gaps = 2/290 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KYI MLL++ IK I+VFDG+HLPAK TE+ RR+ R K +AAELL L R EA+S +
Sbjct: 60 LKYIQMLLSYDIKPILVFDGQHLPAKALTEKRRRESRQQSKQRAAELLRLGRVEEARSQM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH+MAL +I+ CR R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHEMALRLIRECRNRNVDCIVAPYEADAQMAWLNKANIAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I+KLDL+G ++ +KL A+ AK+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KKVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + S +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFMLKTEQDDMRIALKKIPSYLNM-SKLEVDDDYIENFMKAEATFKHMFIYNPLQRRME 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
L LE DE + + LE A LALGNL+PFSL+ +D W P
Sbjct: 299 RLCTLEEYETDESYCSNAGTLLE-DSHLALHLALGNLNPFSLKRLDSWEP 347
>gi|195387976|ref|XP_002052668.1| GJ20464 [Drosophila virilis]
gi|194149125|gb|EDW64823.1| GJ20464 [Drosophila virilis]
Length = 646
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 195/317 (61%), Gaps = 13/317 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ MLL++ IK I+VFDG+HLPAK TE+ RR+ R K +A ELL L R EA+S +
Sbjct: 60 LKYVLMLLSYNIKPILVFDGQHLPAKALTEQRRRESRQQSKKRAMELLRLGRTDEARSQM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH+MAL +IQ CR R +DCIVAP+EADAQMA+LN AG A Y++TEDSDL +FGA
Sbjct: 120 RRCVDVTHEMALRLIQECRMRHIDCIVAPYEADAQMAWLNKAGIAQYIVTEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+KII+KLDL+G ++ EK A+ ++ KFR MCILSGCDY + G+GL KA
Sbjct: 180 QKIIFKLDLNGAGLLVEAEKFHLAMGCTKERYRFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ ++ +F F + +Y+P+ + +
Sbjct: 240 CKFMLKTEQDDMRIALKKIPQYLNMRN-LEVDDAYIENFMKAEATFKHMYIYNPLERRME 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L+ LE +E + L ++A LALGNL+PF+L+ +D W+PD + T
Sbjct: 299 RLSALEDHETEEGHCS-NAGSLLADSEKALHLALGNLNPFTLKSLDNWHPDKATDSKTTS 357
Query: 300 ----------SIWSKQY 306
SIW Q+
Sbjct: 358 AKHIKRTKHKSIWQAQF 374
>gi|91094765|ref|XP_967471.1| PREDICTED: similar to exonuclease [Tribolium castaneum]
Length = 563
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 199/304 (65%), Gaps = 7/304 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKYI LL+H I+ IMVFDGRHLPAK TEE RR+ + + + E L L S+A
Sbjct: 60 MKYIKTLLSHDIRPIMVFDGRHLPAKMKTEEKRRESKKLARKQGMECLRLGHTSDAYKFF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
QS+DVT +MAL +I+ CR +DCIVAP+EADAQ+AYLNI G+AD VITEDSDLL+FG
Sbjct: 120 AQSIDVTPEMALKLIRECRKLHIDCIVAPYEADAQLAYLNIKGFADCVITEDSDLLLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K++YK+D G ++ +K+ ++KM A FT KFRYMCILSGCDY + G+GL+KA
Sbjct: 180 LKVMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRYMCILSGCDYLDSLPGIGLRKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ + + L K+ Y K+ S + +T E+ +F N FL+Q V+DP+ +++V
Sbjct: 240 LKFISMTAETNPNIFLDKLARYLKMPSLI-VTDEYKQNFLVANATFLHQIVFDPIQRKLV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PL P+ +++ + Q + E P + AFQLALGNL+P +L+ +D W P ++ + S
Sbjct: 299 PLTPVTTDVD---YCQ-NAGEFFDP-NTAFQLALGNLNPLTLQPIDNWTP-TKGIVSDFS 352
Query: 301 IWSK 304
IWS+
Sbjct: 353 IWSQ 356
>gi|307171354|gb|EFN63252.1| Exonuclease 1 [Camponotus floridanus]
Length = 762
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 206/326 (63%), Gaps = 17/326 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKYI MLL +KIK I+VFDGR LPAKE TE RR+ R ++ KA EL+ + + +E ++ L
Sbjct: 60 MKYIDMLLKYKIKPILVFDGRRLPAKEHTEIKRRQTRQINRQKAIELIQMGQVAEGRNLL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+TH++AL +I+ C+ +DCI+AP+EADAQ+AYLNI+ AD VITEDSDL +FG
Sbjct: 120 KRAIDITHEIALELIKHCQNENIDCIIAPYEADAQLAYLNISNIADVVITEDSDLTLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KKI +K+D +GN +++++L A+ M +F KFRY+CILSGCDY + G+GL KA
Sbjct: 180 KKIFFKMDFNGNGVLIEQDRLHLAMNMRPEEFDMNKFRYICILSGCDYLPSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ D + AL +I + S V +T+E+ +F ++ F +Q V+ P+ ++ V
Sbjct: 240 RKFISRNTDHNIHRALTRIGSVLNMKSLV-VTQEYRDAFILADITFKHQLVFCPLQRKQV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEE------ 294
L+P +++ ++ QL EL D AFQLALGN DP +L+ + +NPD E
Sbjct: 299 RLSPPTTDITED---QLQYAGKELDPDLAFQLALGNCDPSTLKIVHNFNPDKIERKRKRD 355
Query: 295 -------NLPVTSIWSKQYEKPCDRH 313
L SIWS +Y+ H
Sbjct: 356 VEVGQTLTLIYISIWSTKYKLKTKNH 381
>gi|270016559|gb|EFA13005.1| hypothetical protein TcasGA2_TC001970 [Tribolium castaneum]
Length = 581
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 191/290 (65%), Gaps = 6/290 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKYI LL+H I+ IMVFDGRHLPAK TEE RR+ + + + E L L S+A
Sbjct: 60 MKYIKTLLSHDIRPIMVFDGRHLPAKMKTEEKRRESKKLARKQGMECLRLGHTSDAYKFF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
QS+DVT +MAL +I+ CR +DCIVAP+EADAQ+AYLNI G+AD VITEDSDLL+FG
Sbjct: 120 AQSIDVTPEMALKLIRECRKLHIDCIVAPYEADAQLAYLNIKGFADCVITEDSDLLLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K++YK+D G ++ +K+ ++KM A FT KFRYMCILSGCDY + G+GL+KA
Sbjct: 180 LKVMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRYMCILSGCDYLDSLPGIGLRKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ + + L K+ Y K+ S + +T E+ +F N FL+Q V+DP+ +++V
Sbjct: 240 LKFISMTAETNPNIFLDKLARYLKMPSLI-VTDEYKQNFLVANATFLHQIVFDPIQRKLV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
PL P+ +++ + Q + E P + AFQLALGNL+P +L+ +D W P
Sbjct: 299 PLTPVTTDVD---YCQ-NAGEFFDP-NTAFQLALGNLNPLTLQPIDNWTP 343
>gi|449496989|ref|XP_002193244.2| PREDICTED: exonuclease 1 [Taeniopygia guttata]
Length = 805
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/320 (42%), Positives = 200/320 (62%), Gaps = 19/320 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++HMLL+ IK I+VFDG LP+K+ E+ RR++R + K +LL R SEA+
Sbjct: 60 MKFVHMLLSFGIKPILVFDGCTLPSKKEVEKARRERRQASLLKGKQLLQEGRLSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A RA+GVDCIVAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 GRSVNITHAMAHEVIKAARAQGVDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+ K+D GN +D+ +L + ++ FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 180 KKVFLKIDKFGNGLEIDQTRLGNCKQLGNV-FTEEKFRYMCILSGCDYLPSIHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++K+ Y K+ + + +E++ F N FLYQ V+DPV++++V
Sbjct: 239 CKLLKLANNPDIIKVIKKMGQYLKMN--ITVPEEYIQGFTRANNTFLYQLVFDPVNRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLP--- 297
PLN ++ E L+ + D AFQ+A+GN+D ++E++D +NPD+ + +
Sbjct: 297 PLNAYGDDIDPET---LTYAGRHVGDDTAFQIAVGNIDINTMEQIDSYNPDTAQPVQQRS 353
Query: 298 ----------VTSIWSKQYE 307
V SIWS++Y+
Sbjct: 354 CGWNDRRDNHVNSIWSREYK 373
>gi|426239609|ref|XP_004013712.1| PREDICTED: exonuclease 1 [Ovis aries]
Length = 835
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 211/352 (59%), Gaps = 24/352 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S++VTH MA NVI+A R++GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 TRSINVTHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD +RKI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKLLRLANNPDILKVIRKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIERKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D +LE++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTLEQIDDYNPDTAMLAQSRS 353
Query: 293 --------EENLPVTSIWSKQY--EKPCDRHSSEESVSEPPVFQKLKPVASS 334
+++ + SIW + Y + D S V E P +K V S+
Sbjct: 354 HSWTDRACQKSSNINSIWHRNYCPRRELDIVSDTTKVKENPSTVGIKQVIST 405
>gi|332021099|gb|EGI61486.1| Exonuclease 1 [Acromyrmex echinatior]
Length = 749
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 203/316 (64%), Gaps = 13/316 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKYI+MLL +KIK I+VFDG+ L AKE TE RRK R+ ++ KA EL+ + + +E + L
Sbjct: 60 MKYINMLLKYKIKPILVFDGQRLLAKEQTEIKRRKARELNRRKAIELIQMGKVTEGTNLL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R++VD+TH +AL +I+ C+ +DCI+AP+EADAQ+AYLNI+G AD VITEDSDL +FG
Sbjct: 120 RRAVDITHTIALELIKQCQNENIDCIIAPYEADAQLAYLNISGIADVVITEDSDLTLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KKI +K+DL GN + +++L A+ + +F KFR++CILSGCDY + G+GL KA
Sbjct: 180 KKIFFKMDLVGNGILIAQDQLHLAMNVRSEQFEMDKFRHICILSGCDYLPSLPGIGLGKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ D + AL ++ + S V + +E+ +F + F +Q V+ P+ ++ V
Sbjct: 240 RKFITKSTDQNIHRALTRLGSVLNMKSLV-VPQEYRDAFILAEITFKHQLVFCPLQRKQV 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP---------D 291
LNP + + ++ QL EL +D A QLALGN DP +L+ + +NP D
Sbjct: 299 RLNPPPANITED---QLQYAGKELDEDLALQLALGNCDPATLKMVHDFNPDKIERKRKRD 355
Query: 292 SEENLPVTSIWSKQYE 307
+ + + TSIWS +Y+
Sbjct: 356 TGQTMIQTSIWSDKYK 371
>gi|449278115|gb|EMC86082.1| Exonuclease 1 [Columba livia]
Length = 808
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 196/320 (61%), Gaps = 19/320 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + MLL+ IK I+VFDG LP+K+ E+ RR+KR + K +LL R +EA+
Sbjct: 60 MKLVDMLLSFGIKPILVFDGCTLPSKKEVEKARREKRQASLLKGKQLLQEGRVAEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S++VTH MA VI+A RARG+DCIVAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 GRSINVTHVMAHEVIKAARARGIDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+ K+D GN +DR +L + ++ FT+ KFRYMCILSGCDY + I G+GL KA
Sbjct: 180 KKVFLKIDKFGNGLEIDRARLGNCKQLGNV-FTEEKFRYMCILSGCDYLSSIHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++K+ Y K+ + + +E++ F N FLYQ V+DPV +++V
Sbjct: 239 CKLLKIANNPDIIKVIKKMGQYLKMN--ITVPEEYIQGFTRANNTFLYQLVFDPVKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLP--- 297
PLN ++ E L L D AFQ+A+GN+D ++E++D +NPD+ + +
Sbjct: 297 PLNAYGDDIDPET---LIYAGRHLGDDTAFQIAIGNIDIDTMEQIDNYNPDTAQPVQQRS 353
Query: 298 ----------VTSIWSKQYE 307
V SIWS+ Y+
Sbjct: 354 CGWNDRPANHVNSIWSRDYK 373
>gi|170030670|ref|XP_001843211.1| exonuclease [Culex quinquefasciatus]
gi|167867887|gb|EDS31270.1| exonuclease [Culex quinquefasciatus]
Length = 792
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 194/316 (61%), Gaps = 12/316 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K++++LLA++IK I+VFDGRHLPAK TE RR+ RDS K +AAELL + + EA+S L
Sbjct: 60 LKFVNLLLANEIKPILVFDGRHLPAKAGTEAKRRESRDSSKKRAAELLRMGKVEEAKSFL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VD+TH MAL +I+ CR R VDC+VAP+EADAQ+A+LN G A VITEDSDL++FG
Sbjct: 120 RRCVDITHSMALELIKECRKRNVDCVVAPYEADAQLAFLNKKGIAQVVITEDSDLMLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++KLDL+G+ ++REKL A+ KFT KFRYMCILSG WT +G+G +
Sbjct: 180 SKVLFKLDLTGSGLLIEREKLAVAMGCKEEKFTFDKFRYMCILSGVIIWTRFRGLGCQGE 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +N + S +++++E+ SF + F + VYDP ++
Sbjct: 240 EVCT--------DNGGHGYSKGAGQDSGLQVSEEYKDSFLKADATFRHMVVYDPTERKQT 291
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ-AFQLALGNLDPFSLEEMDQWNPDSEENLPVT 299
LN E D +L +D+ A QLALGN+DPFS++++D ++PD P
Sbjct: 292 RLNDPEEVGTD---PELCCNAGTFLEDKIALQLALGNVDPFSMKQLDNFHPDDPGCQPTG 348
Query: 300 SIWSKQYEKPCDRHSS 315
S + +H+S
Sbjct: 349 GKTSSWNQSSVTKHAS 364
>gi|440904888|gb|ELR55344.1| Exonuclease 1 [Bos grunniens mutus]
Length = 833
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 202/319 (63%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK ++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA NVI+A R++GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 IRSINITHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD +RKI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKLLRLANNPDILKVVRKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ ++ LS + A Q+ALGN D +LE++D +NPD+ +P S
Sbjct: 297 PLNAYEDDVDPKI---LSYAGQYVDDSIALQIALGNKDINTLEQIDDYNPDTA--MPAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSHSWTDKACQKSSNINSI 370
>gi|119908266|ref|XP_582828.3| PREDICTED: exonuclease 1 [Bos taurus]
Length = 835
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 201/319 (63%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK ++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA NVI+A R++GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 IRSINITHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD +RKI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKLLRLANNPDILKVVRKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ + LS + A Q+ALGN D +LE++D +NPD+ +P S
Sbjct: 297 PLNAYEDDVDPKT---LSYAGQYVDDSIALQIALGNKDINTLEQIDHYNPDTA--MPAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSHSWTDKACQKSSNINSI 370
>gi|297484026|ref|XP_002694001.1| PREDICTED: exonuclease 1 [Bos taurus]
gi|296479294|tpg|DAA21409.1| TPA: exonuclease 1 [Bos taurus]
Length = 835
Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 201/319 (63%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK ++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA NVI+A R++GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 IRSINITHTMAHNVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD +RKI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKLLRLANNPDILKVVRKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ + LS + A Q+ALGN D +LE++D +NPD+ +P S
Sbjct: 297 PLNAYEDDVDPKT---LSYAGQYVDDSIALQIALGNKDINTLEQIDHYNPDTA--MPAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSHSWTDKACQKSSNINSI 370
>gi|350589314|ref|XP_003130603.3| PREDICTED: exonuclease 1 [Sus scrofa]
Length = 836
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 204/319 (63%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA +VI+A RA+GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHSVIKAARAQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARLGKCKQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP++++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIEGFIRANNTFLYQLVFDPINRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ + LS + A Q+ALGN D +LE++D +NPD+ +P S
Sbjct: 297 PLNAYEDDIDP---ATLSYAGRYIDDSVALQIALGNKDINTLEQIDDYNPDTV--MPAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSRSWNDKTCQKSSNINSI 370
>gi|47087335|ref|NP_998634.1| exonuclease 1 [Danio rerio]
gi|82177106|sp|Q803U7.1|EXO1_DANRE RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I
gi|28278337|gb|AAH44187.1| Zgc:55521 [Danio rerio]
Length = 806
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 201/347 (57%), Gaps = 35/347 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++ MLL+ +K I+VFDGR+LP+K+ E+ RR++R ++ K +LL + +EA+
Sbjct: 60 MKFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQANLQKGKQLLREGKITEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++T MA +VI+A R RGVDC+VAP+EADAQ+A+LN + A VITEDSDLL FG
Sbjct: 120 TRSVNITPSMAHDVIRAARTRGVDCVVAPYEADAQLAFLNKSDIAQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNC-----CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
KK+I K+D GN C + R K + FT+ KFRYMCILSGCDY + G+
Sbjct: 180 KKVILKMDKQGNGLEIEQCHLGRCKSLGNI------FTEEKFRYMCILSGCDYLQSLYGI 233
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GL KA + +PD ++K+ Y K+ + + +E++ F N FLYQ V+DP+
Sbjct: 234 GLGKACKLLRMANNPDILKVIKKMGQYLKMD--ISVPEEYIEGFTKANNTFLYQLVFDPL 291
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEEN 295
++VVPLNP + + LS + ++ Q+ALGNLD +++ +D +NPD+ +
Sbjct: 292 RRKVVPLNPYPDHINP---AALSYAGTNVGDEKGLQMALGNLDINTMQRIDDFNPDAPQT 348
Query: 296 LP-------------------VTSIWSKQYEKPCDRHSSEESVSEPP 323
P SIWS+ YE C + S S PP
Sbjct: 349 QPPKAPRSSSWNDRCDKTATTQASIWSQNYEPGCTKSQSPTSPKRPP 395
>gi|348535099|ref|XP_003455039.1| PREDICTED: exonuclease 1-like [Oreochromis niloticus]
Length = 776
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 187/291 (64%), Gaps = 6/291 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++ MLL +K I+VFDGR+LP+K+ E+ RR++R+++ K +LL + SEA+
Sbjct: 60 MKFVDMLLTFSVKPILVFDGRNLPSKQEVEKARRERRETNLQKGRQLLREGKLSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ V++T MA N+I+A RARGVDC+VAP+EADAQ+AYL+ +G A VITEDSDLL FG
Sbjct: 120 NRCVNITPAMAHNLIKAARARGVDCVVAPYEADAQLAYLSKSGLAQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ L + FT+ KFRYMCILSGCDY + G+GL KA
Sbjct: 180 KKVILKMDKQGNGLEIDQSNLGRCRSLGNV-FTEEKFRYMCILSGCDYLASLHGIGLGKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ DPD +RK+ Y K+ + + ++++ F N FLYQ V+DPV ++VV
Sbjct: 239 CKLLQLAKDPDILRVIRKMGQYLKMS--LVVPEQYIEGFVRANNTFLYQLVFDPVRRKVV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
PLNP + + LS L L D+ Q+ALGNLD ++E +D ++PD
Sbjct: 297 PLNPYPEHIDP---ATLSYAGLHLGDDKGLQMALGNLDINTMERIDDFSPD 344
>gi|149748996|ref|XP_001491533.1| PREDICTED: exonuclease 1 [Equus caballus]
Length = 835
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 200/319 (62%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++HMLL+H +K I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVHMLLSHGVKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHRVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDHFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++K+ Y K+ + + ++++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLKLANNPDIVKVIKKMGHYLKMN--ITVPEDYIEGFIRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+ P S
Sbjct: 297 PLNAYEDDIAPET---LSYAGRYVDDSVALQIALGNKDINTFEQIDDYNPDTA--TPAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSHSWNDKTCQKSSNVNSI 370
>gi|301766172|ref|XP_002918504.1| PREDICTED: exonuclease 1-like [Ailuropoda melanoleuca]
gi|281346532|gb|EFB22116.1| hypothetical protein PANDA_006967 [Ailuropoda melanoleuca]
Length = 842
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 200/319 (62%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I++FDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILIFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG ++TEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIVTEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLASNPDIVKVIKKIGHYLKMN--ITVPEDYIEGFIRANNTFLYQLVFDPIGRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ E LS A Q+ALGN D +LE++D +NPD+ P S
Sbjct: 297 PLNAYEDDIDPET---LSYAGQYFDDSVALQIALGNKDINTLEQIDDYNPDTAA--PAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSQSWNDKTCQKSSNVNSI 370
>gi|359320017|ref|XP_003639234.1| PREDICTED: exonuclease 1-like [Canis lupus familiaris]
Length = 836
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 200/319 (62%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK +++FDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPVLIFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 SRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DPV ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPVRRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ E LS A Q+ALGN D + E++D +NPD+ +P S
Sbjct: 297 PLNAYEDDIDPET---LSYAGQYFDDSIALQIALGNKDINTFEQIDDYNPDTA--MPAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSQSWNDKTCQKSSNVNSI 370
>gi|444708439|gb|ELW49502.1| Exonuclease 1 [Tupaia chinensis]
Length = 799
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/322 (41%), Positives = 197/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVESSRRERRQANLLKGKQLLREGKISEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHQVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + +++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIIKVIKKIGHYLKMN--IAVPDDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + AFQ+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDIDPET---LSYAGRYVDDSIAFQIALGNKDINTFEQIDDYNPDTAMPAQLRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ + SIW + Y
Sbjct: 354 HSWNDKRCQKSSNINSIWHRNY 375
>gi|395531535|ref|XP_003767833.1| PREDICTED: exonuclease 1 [Sarcophilus harrisii]
Length = 833
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 198/323 (61%), Gaps = 23/323 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + +EA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEKARRERRQTNLLKGKQLLREGKITEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH+MA VI+A RA+GVDCIVAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 ARSVNITHRMAHQVIKAARAQGVDCIVAPYEADAQLAYLNKTGIVHAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMC+LSGCDY + + G+GL KA
Sbjct: 180 KKVILKMDKLGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCVLSGCDYLSSLHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + +E++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKLLKIANNPDIIKVIKKIGHYLKMN--ITVPEEYIKGFIRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ L L AFQ+ALGN D ++E++D +NPD+
Sbjct: 297 PLNAYEDDIDPNT---LHYAGQYLDDTTAFQIALGNKDINTMEQIDDYNPDTAMPHQSRS 353
Query: 293 ---------EENLPVTSIWSKQY 306
++ V SIW++ +
Sbjct: 354 QGWNDKAPDQKTWNVNSIWNRNH 376
>gi|431891721|gb|ELK02292.1| Exonuclease 1 [Pteropus alecto]
Length = 816
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 200/319 (62%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 ARSINITHAMAHRVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y ++ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYIKGFIQANNTFLYQLVFDPIRRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E+++ E LS + A Q+ALGN D + E++D +NPD+ P S
Sbjct: 297 PLNAYEADIDPET---LSYAGRYVDDSIALQIALGNKDINTFEQIDDYNPDTA--APAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S S+
Sbjct: 352 RSHSWNDKACQKSSRVNSI 370
>gi|363731591|ref|XP_419550.3| PREDICTED: exonuclease 1 [Gallus gallus]
Length = 798
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 198/321 (61%), Gaps = 21/321 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + MLL+ IK ++VFDG LP+K+ E+ RR+KR ++ K +L + SEA+
Sbjct: 60 MKLVDMLLSFGIKPVLVFDGCTLPSKKEVEKARREKRQANLLKGKQLFREGKLSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV+VTH MA VI+A RARGVDCIVAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 ARSVNVTHAMAHEVIKAARARGVDCIVAPYEADAQLAYLNKTGVVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+ K+D GN +D+ +L + ++ FT+ KFRYMCILSGCDY + I G+GL KA
Sbjct: 180 KKVFLKIDKFGNGLEIDQARLGNCKQLGNI-FTEEKFRYMCILSGCDYLSSIHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++K+ Y K+ + +++E++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKLLKLANNPDIIKVIKKMGHYLKMN--ITVSEEYIQGFTRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ-AFQLALGNLDPFSLEEMDQWNPDSEENLP-- 297
PLN + D++ + L P D FQ+ALGN+D ++E++D +NPD+ + +
Sbjct: 297 PLN----DYADDIDPETLLYAGRYPFDSTGFQIALGNIDIDTMEQIDNYNPDTAQPVQQR 352
Query: 298 -----------VTSIWSKQYE 307
V SIWSK Y+
Sbjct: 353 SHGWNDKRANHVNSIWSKDYK 373
>gi|326915480|ref|XP_003204045.1| PREDICTED: exonuclease 1-like [Meleagris gallopavo]
Length = 778
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 197/321 (61%), Gaps = 21/321 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + MLL+ IK I+VFDG LP+K+ E+ RR+KR ++ K +L + SEA+
Sbjct: 60 MKLVDMLLSFGIKPILVFDGCTLPSKKEVEKARREKRQANLLKGKQLFREGKFSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV+VTH MA VI+A RARGVDCIVAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 ARSVNVTHAMAHEVIKAARARGVDCIVAPYEADAQLAYLNKTGMVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+ K+D GN +D+ +L + ++ FT+ KFRYMCILSGCDY + I G+GL KA
Sbjct: 180 KKVFLKIDKFGNGLEIDQARLGNCKQLGNV-FTEEKFRYMCILSGCDYLSSIHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++K+ Y K+ + +++E++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKLLKLANNPDIIKVIKKMGHYLKMN--ITVSEEYIQGFTRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ-AFQLALGNLDPFSLEEMDQWNPDSEENLP-- 297
PLN + D+V + + P D FQ+ALGN+D ++E++D +NPD+ +
Sbjct: 297 PLN----DYADDVDPETLIYAGRYPFDSTGFQIALGNIDIDTMEQIDNYNPDTAQPTQQR 352
Query: 298 -----------VTSIWSKQYE 307
V SIWSK Y+
Sbjct: 353 SHGWNDKCANHVNSIWSKDYK 373
>gi|126306967|ref|XP_001368520.1| PREDICTED: exonuclease 1 [Monodelphis domestica]
Length = 838
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 198/323 (61%), Gaps = 23/323 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++ MLL++ IK ++VFDG LP+K+ E+ RR++R ++ K +LL + +EA+
Sbjct: 60 MKFVSMLLSYGIKPVLVFDGCTLPSKKEVEKARRERRQTNLLKGKQLLREGKITEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDCIVAP+EADAQ+AYLN G D +ITEDSDLL FG
Sbjct: 120 ARSINITHNMAHQVIKAARSQGVDCIVAPYEADAQLAYLNKTGIVDAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + + G+GL KA
Sbjct: 180 KKVILKMDKLGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + +E++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKLLKIANNPDIIKVIKKIGHYLKMN--ITVPEEYVKGFIRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD--------- 291
PLN E ++ + L AFQ+ALGN D +LE++D +NPD
Sbjct: 297 PLNAYEDDINPDT---LHYAGQYTDDTTAFQIALGNKDINTLEQIDNYNPDTATLHQSRS 353
Query: 292 --------SEENLPVTSIWSKQY 306
S++ L V SIW++ +
Sbjct: 354 QGWNDRVPSQKPLNVNSIWNRNH 376
>gi|327262075|ref|XP_003215851.1| PREDICTED: exonuclease 1-like [Anolis carolinensis]
Length = 810
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 193/328 (58%), Gaps = 31/328 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + MLL+ +K I+VFDG LP+K+ E+ RR+KR ++ K +LL + SEA+
Sbjct: 60 MKLVDMLLSFGVKPILVFDGCTLPSKKEVEKSRREKRQTNLLKGKQLLREGKLSEAKECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A RA+G+DCIVAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 SRSINITHAMACEVIKAARAQGIDCIVAPYEADAQLAYLNKTGIVQSIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+ K+D GN +D+ +L K FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 180 KKVFLKIDKLGNGLEIDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLPSIHGIGLGKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVK----ITKEFLTSFHNTNLMFLYQPVYDPVS 236
+ +PD I V GK+G Y+K + ++L F N FLYQ V+DPV
Sbjct: 239 CKLLKIANNPDI------IKVIGKMGQYLKMNILVPDDYLQGFIRANNTFLYQLVFDPVR 292
Query: 237 KEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD----- 291
+++VPLN E+++ E L AFQ+ALGN D ++E++D +NPD
Sbjct: 293 RKLVPLNAYENDIDPET---LHYAGRHFGDSTAFQIALGNKDISTMEQIDNYNPDTSQPV 349
Query: 292 ------------SEENLPVTSIWSKQYE 307
SE+ + SIWS+ Y+
Sbjct: 350 QPRSRGWDNKCVSEKPSSLKSIWSRDYK 377
>gi|410985751|ref|XP_003999180.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1 [Felis catus]
Length = 846
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 198/319 (62%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHVMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--IMVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ E LS A Q+ALGN D + E++D +NPD P S
Sbjct: 297 PLNAYEDDIDPET---LSYAGQYFDDSIALQIALGNKDINTFEQIDNYNPDIA--TPAQS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+ S+
Sbjct: 352 RSHSWNDKTCQKSSNVNSI 370
>gi|395855341|ref|XP_003800124.1| PREDICTED: exonuclease 1 [Otolemur garnettii]
Length = 835
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 197/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL++ IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFLNMLLSNGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARL-GMCKQLGDMFTEEKFRYMCILSGCDYLPSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP++++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPITRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDIDPET---LSYAGRYVDNSIALQIALGNKDINTFEQIDDYNPDTATPTQLRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ SIW + Y
Sbjct: 354 HSWNDNTCQKSFNANSIWHRNY 375
>gi|390334349|ref|XP_003723905.1| PREDICTED: uncharacterized protein LOC762697 isoform 2
[Strongylocentrotus purpuratus]
Length = 1092
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 11/313 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++ML A IK +MVFDGR+LPAK E+ RR++R+++ K + L + SEA+
Sbjct: 60 LKYVNMLRALDIKPVMVFDGRNLPAKAGVEDSRRERRETYSKKGRQFLREGKASEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ ++VT +MALNV++A R+ GVDCIVAP+EADAQ+AYL G+ VITEDSDL+ FG
Sbjct: 120 VKCINVTPEMALNVMKAVRSLGVDCIVAPYEADAQLAYLEKNGFVQAVITEDSDLIAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I KLDL+GNC +D +L A+K+ KFT KFRYMCI++GCDY + G+G+ KA
Sbjct: 180 KKVIVKLDLAGNCMDVDSSRLNVAMKIG-EKFTPEKFRYMCIVAGCDYLASLPGIGIGKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++++ K+ S +T E+ F N FLYQ +DP K++
Sbjct: 239 RKLFQLTANPDITQVIKRMATTLKMKSTT-VTPEYQEGFVQANNTFLYQLAFDPQKKKLQ 297
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP------DSEE 294
PL P E+ + E+ +A+Q+ALGN++ ++E + +NP D +
Sbjct: 298 PLTPYSPEVTPATLTYAGKYVDEV---KAYQMALGNINFDTMERIADFNPMVNKPYDKKT 354
Query: 295 NLPVTSIWSKQYE 307
+ SIW K ++
Sbjct: 355 PRHLLSIWHKDFQ 367
>gi|291241252|ref|XP_002740527.1| PREDICTED: exonuclease 1-like [Saccoglossus kowalevskii]
Length = 885
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 204/322 (63%), Gaps = 12/322 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K+++MLL+ +K I+VFDG +LP+KE+ E+ RR++R ++ AK + L + SEA+
Sbjct: 60 LKFVNMLLSMNVKPILVFDGCNLPSKESVEKSRRERRQTYLAKGKQFLREGKVSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ V+VT KMAL+V+QA R+ GVDCIVAP+EADAQ+AYLN G A VITEDSDL+ FG
Sbjct: 120 TKCVNVTSKMALDVMQAARSLGVDCIVAPYEADAQLAYLNRVGIAQCVITEDSDLVAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K++ K+DL+GN +D+ KL +KM +K++ KFRYMCI SGCDY + +GLKKA
Sbjct: 180 DKVMVKMDLNGNGLEIDKSKLNKIMKMG-SKYSFDKFRYMCIASGCDYLASLPNIGLKKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+PD + L++ Y K S + + E++ F N FL+Q V+DP+ ++ +
Sbjct: 239 CKIFQLATNPDLTHVLKRFGHYLK--SNIVVPPEYIQGFIQANNTFLHQIVFDPIKRKSL 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD----SEENL 296
PL P ++ D Q + K ++ ++A QLALGN++ S++ D + PD ++N
Sbjct: 297 PLTPYPDDI-DPKEMQYAGKFVD--DNKALQLALGNINIQSMQIQDDYKPDFHKPIKKNT 353
Query: 297 P--VTSIWSKQYEKPCDRHSSE 316
P + SIW K Y + +SSE
Sbjct: 354 PRYLLSIWHKDYRPLSNGNSSE 375
>gi|345329438|ref|XP_001514118.2| PREDICTED: exonuclease 1 [Ornithorhynchus anatinus]
Length = 799
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 195/323 (60%), Gaps = 23/323 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K + L + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEKARRERRQANFLKGKQFLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ V++TH MA VI+A R++GVDCIVAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 NRCVNITHAMAHQVIKAARSQGVDCIVAPYEADAQLAYLNKTGIVHAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + G+GL KA
Sbjct: 180 KKVILKMDKLGNALEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLPSLHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + +PD ++K+ Y K+ + + ++++ F N FLYQ V+DPV +++V
Sbjct: 239 CRLLRTANNPDVVKVIKKMGHYLKMN--ITVPEDYVEGFVRANNTFLYQLVFDPVRRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ LS + AFQ+ALGN D ++E++D ++PD+
Sbjct: 297 PLNAYEDDVDP---GTLSYAGPHVGDSTAFQIALGNKDINTMEQIDDYSPDAAPPCQPRS 353
Query: 293 ---------EENLPVTSIWSKQY 306
E +SIWSK Y
Sbjct: 354 RGWNDPAALERTSSSSSIWSKNY 376
>gi|432904048|ref|XP_004077258.1| PREDICTED: exonuclease 1-like [Oryzias latipes]
Length = 752
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 189/302 (62%), Gaps = 6/302 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K++ MLL IK I+VFDGR+LP+K+ E+ RR++R+++ K LL + SEA+
Sbjct: 60 LKFVDMLLNFSIKPILVFDGRNLPSKQEVEKARRERREANLQKGRRLLREGKLSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ V++T MA N+I+A RARGVDC+VAP+EADAQ+AYL +G A VITEDSDLL FG
Sbjct: 120 TRCVNITPAMAHNLIKAARARGVDCLVAPYEADAQLAYLTKSGLAQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +I K+D GN +D+ L + FT+ KFRYMCILSGCDY + G+GL KA
Sbjct: 180 KTVILKMDKQGNGLEIDQGNLGRCRSLGNI-FTEEKFRYMCILSGCDYLPSLHGIGLGKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ DPD ++K+ Y K+ + + +E++ F N FL+Q V+DPV ++V+
Sbjct: 239 CKLLRLAKDPDILKVIKKMGQYLKMN--LVVPEEYVEGFIRANNTFLHQLVFDPVQRKVI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLNP E D + LS L D+ ++ALGNLD ++E +D ++PD+ + T+
Sbjct: 297 PLNPY-PEHTDP--ASLSYAGLNPGDDRGLEMALGNLDFNTMERIDDFSPDNPQGKHRTN 353
Query: 301 IW 302
W
Sbjct: 354 SW 355
>gi|351707066|gb|EHB09985.1| Exonuclease 1 [Heterocephalus glaber]
Length = 838
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 197/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I++FDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARTLGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQSRLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD E ++KI Y K+ + + ++++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLRLANNPDIEKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E L+ + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDIDPET---LTYAGQYIDDSIALQIALGNKDINTFEQIDDYNPDTAMPSLLRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V SIW + Y
Sbjct: 354 HSWDDKACQKSPAVNSIWHRNY 375
>gi|390334351|ref|XP_003723906.1| PREDICTED: uncharacterized protein LOC762697 isoform 3
[Strongylocentrotus purpuratus]
Length = 1028
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 189/308 (61%), Gaps = 11/308 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
ML A IK +MVFDGR+LPAK E+ RR++R+++ K + L + SEA+ + ++
Sbjct: 1 MLRALDIKPVMVFDGRNLPAKAGVEDSRRERRETYSKKGRQFLREGKASEARDCFVKCIN 60
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT +MALNV++A R+ GVDCIVAP+EADAQ+AYL G+ VITEDSDL+ FG KK+I
Sbjct: 61 VTPEMALNVMKAVRSLGVDCIVAPYEADAQLAYLEKNGFVQAVITEDSDLIAFGCKKVIV 120
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
KLDL+GNC +D +L A+K+ KFT KFRYMCI++GCDY + G+G+ KA+
Sbjct: 121 KLDLAGNCMDVDSSRLNVAMKIG-EKFTPEKFRYMCIVAGCDYLASLPGIGIGKARKLFQ 179
Query: 186 SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPL 245
+PD ++++ K+ S +T E+ F N FLYQ +DP K++ PL P
Sbjct: 180 LTANPDITQVIKRMATTLKMKSTT-VTPEYQEGFVQANNTFLYQLAFDPQKKKLQPLTPY 238
Query: 246 ESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP------DSEENLPVT 299
E+ + L+ + + +A+Q+ALGN++ ++E + +NP D + +
Sbjct: 239 SPEV---TPATLTYAGKYVDEVKAYQMALGNINFDTMERIADFNPMVNKPYDKKTPRHLL 295
Query: 300 SIWSKQYE 307
SIW K ++
Sbjct: 296 SIWHKDFQ 303
>gi|3445182|gb|AAC32424.1| Hex1 [Homo sapiens]
gi|3822434|gb|AAC69880.1| exonuclease Ia [Homo sapiens]
Length = 803
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|284055276|ref|NP_003677.4| exonuclease 1 isoform a [Homo sapiens]
Length = 803
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 HSWDDKTCQKSANVSSIWHRNY 375
>gi|3513573|gb|AAC33874.1| exonuclease I [Homo sapiens]
Length = 800
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|410354891|gb|JAA44049.1| exonuclease 1 [Pan troglodytes]
gi|410354893|gb|JAA44050.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 201/319 (63%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+ +PV S
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTA--MPVHS 351
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + ++ S+
Sbjct: 352 RSRSWDDKTCQKSANVSSI 370
>gi|3170238|gb|AAC32259.1| Hex1 [Homo sapiens]
gi|3703096|gb|AAC63043.1| exonuclease 1a [Homo sapiens]
Length = 803
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|119590512|gb|EAW70106.1| exonuclease 1, isoform CRA_c [Homo sapiens]
Length = 803
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 HSWDDKTCQKSANVSSIWHRNY 375
>gi|344278553|ref|XP_003411058.1| PREDICTED: exonuclease 1 [Loxodonta africana]
Length = 927
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 201/319 (63%), Gaps = 8/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ EE RR++R ++ K +LL + SEA+
Sbjct: 136 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEESRRERRQANLLKGKQLLREGKVSEARECF 195
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 196 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNRAGIVQAIITEDSDLLAFGC 255
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 256 KKVILKMDQLGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 314
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 315 CKLLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 372
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ E LS + A Q+ALGN D +LE++D +NPD+ P S
Sbjct: 373 PLNAYEDDIDPET---LSYAGWYVDDSVALQIALGNKDINTLEQIDDYNPDTA--TPAQS 427
Query: 301 IWSKQYEKPCDRHSSEESV 319
++ C + S+ S+
Sbjct: 428 RSHNWNDRTCQKSSNVNSI 446
>gi|354475343|ref|XP_003499889.1| PREDICTED: exonuclease 1 [Cricetulus griseus]
Length = 841
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 199/319 (62%), Gaps = 9/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H +K I+VFDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGVKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++T F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLKLANNPDIVKVIKKIGQYLKMN--ITVPEDYITGFIRANNTFLYQLVFDPIQRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN +++ E LS + +A Q ALGN D + E++D ++PD+ +PV S
Sbjct: 297 PLNAYGNDVDPET---LSYAGQYVDDSEALQRALGNRDINTFEQIDDYSPDT---MPVHS 350
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+
Sbjct: 351 RSHSWNDKSCQKSPVANSI 369
>gi|119590509|gb|EAW70103.1| exonuclease 1, isoform CRA_a [Homo sapiens]
gi|119590511|gb|EAW70105.1| exonuclease 1, isoform CRA_a [Homo sapiens]
Length = 846
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 HSWDDKTCQKSANVSSIWHRNY 375
>gi|13960099|gb|AAH07491.1| Exonuclease 1 [Homo sapiens]
gi|123991816|gb|ABM83958.1| exonuclease 1 [synthetic construct]
gi|157928518|gb|ABW03555.1| exonuclease 1 [synthetic construct]
gi|307684586|dbj|BAJ20333.1| exonuclease 1 [synthetic construct]
Length = 846
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 HSWDDKTCQKSANVSSIWHRNY 375
>gi|158256018|dbj|BAF83980.1| unnamed protein product [Homo sapiens]
Length = 845
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVGDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|4249655|gb|AAD13754.1| exonuclease I [Homo sapiens]
Length = 846
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|332236488|ref|XP_003267433.1| PREDICTED: exonuclease 1 [Nomascus leucogenys]
Length = 817
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 31 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 90
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 91 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 150
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 151 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 209
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 210 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 267
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 268 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 324
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 325 RSCDDKTCQKSANVSSIWHRNY 346
>gi|3822433|gb|AAC69879.1| exonuclease Ib [Homo sapiens]
gi|23664448|gb|AAN39382.1| exonuclease 1 [Homo sapiens]
Length = 846
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|284055278|ref|NP_006018.4| exonuclease 1 isoform b [Homo sapiens]
gi|284172361|ref|NP_569082.2| exonuclease 1 isoform b [Homo sapiens]
gi|85700954|sp|Q9UQ84.2|EXO1_HUMAN RecName: Full=Exonuclease 1; Short=hExo1; AltName: Full=Exonuclease
I; Short=hExoI
Length = 846
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 HSWDDKTCQKSANVSSIWHRNY 375
>gi|344249656|gb|EGW05760.1| Exonuclease 1 [Cricetulus griseus]
Length = 878
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 199/319 (62%), Gaps = 9/319 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H +K I+VFDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGVKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++T F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLKLANNPDIVKVIKKIGQYLKMN--ITVPEDYITGFIRANNTFLYQLVFDPIQRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN +++ E LS + +A Q ALGN D + E++D ++PD+ +PV S
Sbjct: 297 PLNAYGNDVDPET---LSYAGQYVDDSEALQRALGNRDINTFEQIDDYSPDT---MPVHS 350
Query: 301 IWSKQYEKPCDRHSSEESV 319
+K C + S+
Sbjct: 351 RSHSWNDKSCQKSPVANSI 369
>gi|114573428|ref|XP_001160902.1| PREDICTED: exonuclease 1 isoform 2 [Pan troglodytes]
gi|114573430|ref|XP_001160941.1| PREDICTED: exonuclease 1 isoform 3 [Pan troglodytes]
gi|410251950|gb|JAA13942.1| exonuclease 1 [Pan troglodytes]
gi|410251952|gb|JAA13943.1| exonuclease 1 [Pan troglodytes]
gi|410297546|gb|JAA27373.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|397508251|ref|XP_003824575.1| PREDICTED: exonuclease 1 isoform 1 [Pan paniscus]
gi|397508253|ref|XP_003824576.1| PREDICTED: exonuclease 1 isoform 2 [Pan paniscus]
Length = 846
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|291402134|ref|XP_002717387.1| PREDICTED: exonuclease 1 [Oryctolagus cuniculus]
Length = 831
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/332 (40%), Positives = 200/332 (60%), Gaps = 25/332 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK ++VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPVLVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN G +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKVGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQYGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIEGFIRANNTFLYQLVFDPIRRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDIDPET---LSYAGQYVDDAIALQIALGNKDINTFEQIDDYNPDTAMPAQMRS 353
Query: 293 --------EENLPVTSIWSKQYEKPCDRHSSE 316
++ V SIW + Y C R SE
Sbjct: 354 HSWNDKACQKTFNVNSIWHRNY---CPRTESE 382
>gi|410220862|gb|JAA07650.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|426334339|ref|XP_004028711.1| PREDICTED: exonuclease 1 isoform 1 [Gorilla gorilla gorilla]
gi|426334341|ref|XP_004028712.1| PREDICTED: exonuclease 1 isoform 2 [Gorilla gorilla gorilla]
Length = 846
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKKCQKSANVSSIWHRNY 375
>gi|403288380|ref|XP_003935384.1| PREDICTED: exonuclease 1 [Saimiri boliviensis boliviensis]
Length = 847
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 200/318 (62%), Gaps = 12/318 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLKLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+ +P S
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDVNTFEQIDDYNPDTA--MPAHS 351
Query: 301 ---IW-SKQYEKPCDRHS 314
W K +KP + HS
Sbjct: 352 RSHSWDDKTCQKPANVHS 369
>gi|383422759|gb|AFH34593.1| exonuclease 1 isoform b [Macaca mulatta]
Length = 846
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--IMVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|355746262|gb|EHH50887.1| hypothetical protein EGM_01782 [Macaca fascicularis]
Length = 846
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIEQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--IMVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|443709639|gb|ELU04231.1| hypothetical protein CAPTEDRAFT_95129 [Capitella teleta]
Length = 423
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 197/330 (59%), Gaps = 13/330 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKYI+MLL++ IK I+V DG HLP+K+ E+ RR++R+ ++ KAA+LL + EA+ L
Sbjct: 60 MKYINMLLSYDIKPILVLDGCHLPSKKNVEKKRRERRELNRKKAAQLLRDGKRKEARDAL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q +D+T +MAL ++ ACR +GVDCI AP+EADAQ+AYL+ G A +ITEDSDL++FG
Sbjct: 120 VQCIDITPQMALELMNACRDKGVDCITAPYEADAQLAYLSQTGIAQVIITEDSDLILFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
I++K+D SG + + L A+K+ A +T KFRYMC+LSGCDY + G+GL KA
Sbjct: 180 HTIMFKMDTSGAGMLIQNKDLNKAMKLQDAHYTFDKFRYMCMLSGCDYHANLPGIGLSKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D L+KI + I + + ++ E++ F + FLYQ V+DP+S+++
Sbjct: 240 CKAMKLTRQIDVRLILKKIPMLLNIRN-LTVSAEYIEGFIRADNTFLYQLVFDPLSRKLT 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLD-------PFSLEEMDQ-WNPDS 292
PLNP ++ E + + D AFQLALGN+D F Q W D+
Sbjct: 299 PLNPYPPGVKAE---DMHYAGPPMSPDHAFQLALGNMDIQGNRIANFDPAPRSQSWINDT 355
Query: 293 EENLPVTSIWSKQYEKPCDRHSSEESVSEP 322
E+ + SIW Y KP + E + P
Sbjct: 356 EKTPYLLSIWDPNY-KPRGQVPEGEEPTRP 384
>gi|402858507|ref|XP_003893743.1| PREDICTED: exonuclease 1 isoform 1 [Papio anubis]
gi|402858509|ref|XP_003893744.1| PREDICTED: exonuclease 1 isoform 2 [Papio anubis]
Length = 846
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 198/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R + K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQASLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|355559130|gb|EHH15910.1| hypothetical protein EGK_02078 [Macaca mulatta]
Length = 943
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVKAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--IMVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|109019828|ref|XP_001093427.1| PREDICTED: exonuclease 1 isoform 2 [Macaca mulatta]
Length = 846
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 198/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ +++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--IMVPEDYIKGFIRANNTFLYQLVFDPIKRKLT 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 RSWDDKTCQKSANVSSIWHRNY 375
>gi|296230855|ref|XP_002760913.1| PREDICTED: exonuclease 1 [Callithrix jacchus]
Length = 852
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 198/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + EA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVPEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLKLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTVMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
++++ V SIW K Y
Sbjct: 354 HSWDDKTCQKSVNVRSIWHKNY 375
>gi|297661539|ref|XP_002809295.1| PREDICTED: exonuclease 1 [Pongo abelii]
Length = 846
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHRVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDT 345
>gi|348577145|ref|XP_003474345.1| PREDICTED: exonuclease 1-like [Cavia porcellus]
Length = 839
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 197/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ V++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRCVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQTRLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIKGFIRANNTFLYQLVFDPIKRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ + L+ + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDIDPKT---LTYAGQYIDDAIALQIALGNKDINTFEQIDDYNPDTAMPSQLRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V SIW++ Y
Sbjct: 354 HSWDEKACQKSSSVNSIWNRNY 375
>gi|329666203|pdb|3QEA|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (Wt) In
Complex With Dna (Complex Ii)
gi|329666206|pdb|3QEB|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (Wt) In
Complex With Dna And Mn2+ (Complex Iii)
Length = 352
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 189/292 (64%), Gaps = 6/292 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDT 345
>gi|157821351|ref|NP_001100668.1| exonuclease 1 [Rattus norvegicus]
gi|149040819|gb|EDL94776.1| exonuclease 1 (predicted) [Rattus norvegicus]
Length = 836
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 195/321 (60%), Gaps = 21/321 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL++ +K I+VFDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSYGVKPILVFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 TRSVNITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++T F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYITGFIRANNTFLYQLVFDPIQRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN ++ E L+ + A Q+ALGN D + E++D ++PD+
Sbjct: 297 PLNAYGDDVNPET---LTYAGQYVDDSVALQIALGNRDINTFEQIDDYSPDTMPAHSRSH 353
Query: 293 -------EENLPVTSIWSKQY 306
+++ +SIW K Y
Sbjct: 354 SWNDKACQKSPVASSIWHKNY 374
>gi|410929919|ref|XP_003978346.1| PREDICTED: exonuclease 1-like [Takifugu rubripes]
Length = 740
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/294 (44%), Positives = 184/294 (62%), Gaps = 12/294 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+++ MLL +IK I+VFDGR+LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MRFVEMLLTFRIKPILVFDGRNLPSKQEVERARRERRTSNLQKGRQLLREGKVSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV +T MA N+++A RARGVDCIVAP+EADAQ+AYL A VITEDSDLL FG
Sbjct: 120 TRSVSITPAMAHNLMKAARARGVDCIVAPYEADAQLAYLTKWHLAQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ L + FT+ KFR+MCILSGCDY + G+GL KA
Sbjct: 180 KKVILKMDKHGNGLEIDQNNLGRCRALGNI-FTEEKFRHMCILSGCDYLPSLHGIGLGKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD +RK+ Y K+ + I ++++ F N FLYQ V+DPVS++VV
Sbjct: 239 CKLLRLAKEPDITKVIRKMAQYLKMN--LLIPEQYIEGFTRANNTFLYQLVFDPVSRKVV 296
Query: 241 PLNPLESEMRDEVFSQLSL---KELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
PLNP + + + +E+EL QLA+GNLD +LE +D +NPD
Sbjct: 297 PLNPYPDHISGDTLTYAGSHFGEEIEL------QLAMGNLDIETLERIDDFNPD 344
>gi|329666197|pdb|3QE9|Y Chain Y, Crystal Structure Of Human Exonuclease 1 Exo1 (D173a) In
Complex With Dna (Complex I)
gi|329666200|pdb|3QE9|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (D173a) In
Complex With Dna (Complex I)
Length = 352
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 188/292 (64%), Gaps = 6/292 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDS LL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSALLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDT 345
>gi|148227124|ref|NP_001083827.1| exonuclease 1 [Xenopus laevis]
gi|54035218|gb|AAH84102.1| EXOI protein [Xenopus laevis]
Length = 734
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK +HMLL+ +K I+VFDG LP+K+ E+ RR+KR ++ K +LL + +EA+
Sbjct: 60 MKLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQTNLQKGKQLLREGKLAEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++T MA VI+A R+ GVD IVAP+EAD+Q+AYLN +A+ +ITEDSDLL FG
Sbjct: 120 SRSVNITSSMAHEVIKAARSEGVDYIVAPYEADSQLAYLNKNDFAEAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++ K+D GN +D+ + + FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 180 KKVLLKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y + + + + + ++ F N FLYQ V+DPV ++++
Sbjct: 239 CKLLKVANNPDITKVIQKIGQY--LKTNITVPEGYIEGFLRANNTFLYQLVFDPVERKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
PLNP +++ E +L+ + A Q+ALGN+D + +++D +NPD
Sbjct: 297 PLNPYGNDVNPE---ELNYAGPNMGDSVALQIALGNMDINTRKQIDDYNPD 344
>gi|74151267|dbj|BAE38768.1| unnamed protein product [Mus musculus]
Length = 837
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 193/310 (62%), Gaps = 7/310 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL++ +K I++FDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 ARSINITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y ++ + + ++++T F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYITGFIRANNTFLYQLVFDPIQRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN ++ E L+ + A Q+ALGN D + E++D ++PD+ +
Sbjct: 297 PLNAYGDDVNPET---LTYAGQYVGDSVALQIALGNRDVNTFEQIDDYSPDTMPAHSRSH 353
Query: 301 IWS-KQYEKP 309
W+ K +KP
Sbjct: 354 SWNEKAGQKP 363
>gi|82119986|sp|Q9W6K2.1|EXO1_XENLA RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I
gi|4884906|gb|AAD31867.1|AF134570_1 exonuclease ExoI [Xenopus laevis]
Length = 734
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK +HMLL+ +K I+VFDG LP+K+ E+ RR+KR ++ K +LL + +EA+
Sbjct: 60 MKLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQTNLQKGKQLLREGKLAEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++T MA VI+A R+ GVD IVAP+EAD+Q+AYLN +A+ +ITEDSDLL FG
Sbjct: 120 SRSVNITSSMAHEVIKAARSEGVDYIVAPYEADSQLAYLNKNDFAEAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++ K+D GN +D+ + + FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 180 KKVLLKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y + + + + + ++ F N FLYQ V+DPV ++++
Sbjct: 239 CKLLKVANNPDITKVIQKIGQY--LKTNITVPEGYIEGFLRANNTFLYQLVFDPVERKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
PLNP +++ E +L+ + A Q+ALGN+D + +++D +NPD
Sbjct: 297 PLNPYGNDVNPE---ELNYAGPNMGDSVALQIALGNMDINTRKQIDDYNPD 344
>gi|31560511|ref|NP_036142.2| exonuclease 1 [Mus musculus]
gi|85700955|sp|Q9QZ11.2|EXO1_MOUSE RecName: Full=Exonuclease 1; Short=mExo1; AltName: Full=Exonuclease
I
gi|13879382|gb|AAH06671.1| Exonuclease 1 [Mus musculus]
gi|26324664|dbj|BAC26086.1| unnamed protein product [Mus musculus]
gi|148681255|gb|EDL13202.1| exonuclease 1 [Mus musculus]
Length = 837
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 193/310 (62%), Gaps = 7/310 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL++ +K I++FDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 ARSINITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y ++ + + ++++T F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYITGFIRANNTFLYQLVFDPIQRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN ++ E L+ + A Q+ALGN D + E++D ++PD+ +
Sbjct: 297 PLNAYGDDVNPET---LTYAGQYVGDSVALQIALGNRDVNTFEQIDDYSPDTMPAHSRSH 353
Query: 301 IWS-KQYEKP 309
W+ K +KP
Sbjct: 354 SWNEKAGQKP 363
>gi|5689874|emb|CAB51863.1| exonuclease 1 homologue [Mus musculus]
Length = 837
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 193/310 (62%), Gaps = 7/310 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL++ +K I++FDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 ARSINITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y ++ + + ++++T F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYITGFIRANNTFLYQLVFDPIQRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN ++ E L+ + A Q+ALGN D + E++D ++PD+ +
Sbjct: 297 PLNAYGDDVNPET---LTYAGQYVGDSVALQIALGNRDVNTFEQIDDYSPDTMPAHSRSH 353
Query: 301 IWS-KQYEKP 309
W+ K +KP
Sbjct: 354 SWNEKAGQKP 363
>gi|350425172|ref|XP_003494035.1| PREDICTED: exonuclease 1-like [Bombus impatiens]
Length = 619
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 169/253 (66%), Gaps = 5/253 (1%)
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
+E ++ LR+S+DVTH+MAL +I+ C +DCIVAP+EADAQ+AYLNI G AD VITEDS
Sbjct: 7 AEGRNLLRRSIDVTHEMALELIKQCHEMNIDCIVAPYEADAQLAYLNINGIADVVITEDS 66
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
DL++FG KK+++K+DL+GN +D+E+L A+++P F F YMCILSGCDY +
Sbjct: 67 DLILFGCKKVLFKMDLTGNGLLIDQEQLHLAMEIPSKHFNMDDFCYMCILSGCDYLPSLP 126
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
G+GL KA+ ++ D D AL ++ Y + S V +TKE+ SF + F +Q V+
Sbjct: 127 GIGLNKARKFIKLNKDCDIHKALTRLGSYLNMKSLV-VTKEYRDSFTLAVITFKHQLVFC 185
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSE 293
P+ ++ V LNP S++ +E QL LE+ D A QLALGN DPF+L+ + +NPD
Sbjct: 186 PLKRKQVRLNPPTSDVTEE---QLYYAGLEIDPDIALQLALGNCDPFTLKTLHNFNPDKI 242
Query: 294 EN-LPVTSIWSKQ 305
+N + +IW+++
Sbjct: 243 KNKVNKCNIWTQK 255
>gi|321462066|gb|EFX73092.1| hypothetical protein DAPPUDRAFT_110118 [Daphnia pulex]
Length = 283
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 170/278 (61%), Gaps = 4/278 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K+++MLL+H IK I+VFDG+ LP+K TE RR+ R+ +K +A E L S+A+
Sbjct: 9 VKFVNMLLSHDIKPILVFDGQPLPSKLGTELKRRENRERNKIQAREYLRQGNNSKARECF 68
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VDVT MAL +I+ CRAR +DCIVAP+EADAQ+A+L I G A +ITEDSDLL FG
Sbjct: 69 QKCVDVTSTMALELIKVCRARNIDCIVAPYEADAQLAFLAIQGIAHLIITEDSDLLAFGC 128
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+I++K+D +G ++++KL +L F D KFR MCILSGCDY +KG+GL +A
Sbjct: 129 PRILFKMDQAGTGVLIEKDKLFLSLGGQAEFFNDEKFRRMCILSGCDYLPSLKGIGLARA 188
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D D + L K+ + + ++IT E+ +F FLYQ +Y+P ++++
Sbjct: 189 FKFFSGSTDSDLNSLLCKVPACLNMPT-LEITLEYRENFVKAEQTFLYQLIYEPRQRKLL 247
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLD 278
PL + E L + D AFQLA+G +
Sbjct: 248 PLTTYPPNLDPE---SLPFAGRYMTDDVAFQLAIGKCN 282
>gi|198430437|ref|XP_002130214.1| PREDICTED: similar to exonuclease 1 [Ciona intestinalis]
Length = 745
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 183/339 (53%), Gaps = 18/339 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKY+ ML HK+K I+VFDG LP+KE E+ R K+R + K + L + S+A+
Sbjct: 60 MKYLDMLQVHKVKPILVFDGCRLPSKELVEQQRHKRRKENLEKGKQYLREGKLSQARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ + VT MAL+V+QA R+RG+DCIVAP+EADAQ+A+L+ G A +ITEDSDLL FG
Sbjct: 120 TKCISVTPAMALDVMQAARSRGIDCIVAPYEADAQLAFLSKKGIAQAIITEDSDLLCFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+++K+D+ G + E L L FT FR+MCILSGCDY IKG+GL KA
Sbjct: 180 NNVVFKMDVLGRGQQVKMEHLGRVKN--LVGFTPELFRHMCILSGCDYLPSIKGVGLVKA 237
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D RK+N Y I S I + F + FLYQ V+DP +E++
Sbjct: 238 CKALKLSKSKDAYQVARKLNQY--IKSVGPIDPSYGADFERADKTFLYQLVFDPSKRELI 295
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLD-----PFSLEEMDQWNPDSEEN 295
PLN + L+ K +AFQLA+GN+D ++D+W +
Sbjct: 296 PLNEYPPGV---TVDDLNFAGAMFNKAEAFQLAIGNVDVNTKLRIGFFDVDEWISSRKST 352
Query: 296 LPVTSIWSKQYEKPCDRHSSE----ESVSEPPVFQKLKP 330
P SIWS + +++ E VSE P Q KP
Sbjct: 353 SP--SIWSSKNNSHKAVSNADTVFIEQVSEKPTKQMNKP 389
>gi|383861101|ref|XP_003706025.1| PREDICTED: exonuclease 1-like [Megachile rotundata]
Length = 612
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 168/274 (61%), Gaps = 20/274 (7%)
Query: 50 LDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVI 109
+ + +E ++ LR+S+DVTH+MAL +I+ C +DCIVAP+EADAQ+AYLNI+G AD +I
Sbjct: 1 MGQHAEGRNLLRRSIDVTHEMALELIKECHKMNIDCIVAPYEADAQLAYLNISGIADVII 60
Query: 110 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW 169
TEDSDL++FG KK+ +K+D++G+ +D+++L A+ + F+ +FRYMCILSGCDY
Sbjct: 61 TEDSDLILFGCKKVFFKMDVNGSGILVDQDRLHVAMDVSSEHFSMDQFRYMCILSGCDYL 120
Query: 170 TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
+ G+GL KA+ ++ D + AL ++ Y + S V +T+E+ +F ++ F +Q
Sbjct: 121 PSLPGIGLGKARKFIRINTDSNIHRALTRLGSYLNMKSVV-VTQEYRDAFILADITFKHQ 179
Query: 230 PVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
V+ P+ ++ V LNP M D QL +E D A QLA GN DPF+L+ + ++
Sbjct: 180 LVFCPLRRKQVRLNP---PMPDVTEEQLHYAGVETNPDIALQLAYGNCDPFTLKMLHNFD 236
Query: 290 PDSEENLPV----------------TSIWSKQYE 307
PD NL SIWSK Y+
Sbjct: 237 PDKTTNLKNKFNNSWKQSMTSHSKHISIWSKLYK 270
>gi|119590510|gb|EAW70104.1| exonuclease 1, isoform CRA_b [Homo sapiens]
Length = 763
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 176/297 (59%), Gaps = 22/297 (7%)
Query: 26 KEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDC 85
K A E ++R ++ K +LL + SEA+ +S+++TH MA VI+A R++GVDC
Sbjct: 45 KLAKGEPTDRRRQANLLKGKQLLREGKVSEARECFTRSINITHAMAHKVIKAARSQGVDC 104
Query: 86 IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL 145
+VAP+EADAQ+AYLN AG +ITEDSDLL FG KK+I K+D GN +D+ +L
Sbjct: 105 LVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCR 164
Query: 146 KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKI 205
++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD ++KI Y K+
Sbjct: 165 QLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLKM 223
Query: 206 GSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELP 265
+ + ++++ F N FLYQ V+DP+ ++++PLN E ++ E LS +
Sbjct: 224 N--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNAYEDDVDPET---LSYAGQYVD 278
Query: 266 KDQAFQLALGNLDPFSLEEMDQWNPDS----------------EENLPVTSIWSKQY 306
A Q+ALGN D + E++D +NPD+ +++ V+SIW + Y
Sbjct: 279 DSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKTCQKSANVSSIWHRNY 335
>gi|301606138|ref|XP_002932663.1| PREDICTED: exonuclease 1-like, partial [Xenopus (Silurana)
tropicalis]
Length = 651
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 171/280 (61%), Gaps = 7/280 (2%)
Query: 30 EEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAP 89
E+ RR+KR ++ K +LL + +EA+ +SV++T MA +VI+A RA G+DCIVAP
Sbjct: 4 EKARREKRQTNLQKGKQLLREGKLAEARECFARSVNITSSMAHDVIKAARAEGIDCIVAP 63
Query: 90 FEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPL 149
FEAD+Q+AYLN +A+ +ITEDSDLL FG KK+I K+D GN +D+ + +
Sbjct: 64 FEADSQLAYLNKNEFAEAIITEDSDLLAFGCKKVILKMDKFGNGLEIDQARFGMCRSLGD 123
Query: 150 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYV 209
FT+ KFRYMCILSGCDY I G+GL KA + +PD ++KI Y + + +
Sbjct: 124 V-FTEEKFRYMCILSGCDYLPSIHGIGLAKACKLLKIANNPDITTVIKKIGQY--LKTNI 180
Query: 210 KITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQA 269
+ ++ F N FLYQ V+DPV ++++PLNP ++ E +LS + A
Sbjct: 181 TVPDGYIEGFLRANNTFLYQLVFDPVERKLIPLNPYGDDVNPE---ELSYAGPNMGDSVA 237
Query: 270 FQLALGNLDPFSLEEMDQWNPDSEENLPVTSIW-SKQYEK 308
Q+ALGN+D +++++D +NPD+ + + W SKQ +
Sbjct: 238 LQIALGNMDINTMKQIDDYNPDNPQLSHRSQSWDSKQLNR 277
>gi|242016342|ref|XP_002428788.1| exonuclease, putative [Pediculus humanus corporis]
gi|212513473|gb|EEB16050.1| exonuclease, putative [Pediculus humanus corporis]
Length = 744
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 177/293 (60%), Gaps = 11/293 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+YI ML K+K I+VFDGR L +KE TE+ RR++R +K LL + E + +
Sbjct: 60 MRYIEMLQHFKVKPILVFDGRDLISKEQTEKKRREERSRKLSKGLNLLRAGKIVEGKQLI 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SVDV+H + +N+++ CR +DCIVAP+EADAQ+AY +I ++TEDSDLL +G
Sbjct: 120 GESVDVSHDLVVNLMKECRKMNIDCIVAPYEADAQLAYFSINKIVSCIVTEDSDLLAYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+K+++K++ +G +++ + +L + F++ KFR+MCIL GCDY + +G A
Sbjct: 180 EKVMFKMEKNGRGKIVEKNNIYKSLGIKEEDFSEEKFRHMCILCGCDYLPSLPSIGPANA 239
Query: 181 KDYVFSIMDPDFENALRKINVY-GKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
++ I D + L ++ +Y K+ + ++ E++ F + F YQ VYDP +
Sbjct: 240 SKFIKLISDKKTVDCLPQLPIYLNKLK--ITVSPEYIEGFKVADNTFKYQLVYDPFLRMQ 297
Query: 240 VPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS 292
VPL PL S+ + V LP D+AFQLA+GN+DP ++ +D ++PD+
Sbjct: 298 VPLRPL-SDGAEPVGKM-------LPNDEAFQLAIGNIDPSTMLLVDNYDPDT 342
>gi|328778065|ref|XP_623359.2| PREDICTED: exonuclease 1-like [Apis mellifera]
Length = 618
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 164/271 (60%), Gaps = 17/271 (6%)
Query: 50 LDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVI 109
+ + +EA++ +++S+D+TH+MAL +I+ C +DCIVAP+EADAQ+AYLNI D VI
Sbjct: 3 MGQHAEARNLIKRSIDITHEMALKLIKECHKMNIDCIVAPYEADAQLAYLNINRIVDVVI 62
Query: 110 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW 169
TEDSDL++FG KK+++K+DL+GN +D+E+L + + F F YMCILSGCDY
Sbjct: 63 TEDSDLILFGCKKVLFKMDLNGNGLLVDQEQLYLVMDVRSEHFNMDNFLYMCILSGCDYL 122
Query: 170 TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
+ + G+GL KAK ++ D D AL ++ Y + S V ++KE+ SF + F +Q
Sbjct: 123 SSLPGIGLNKAKKFISRNADCDIYRALTRLGSYLNMKSLV-VSKEYRDSFILAVITFKHQ 181
Query: 230 PVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
V+ P+ ++ V LNP M D QL E D A QLALGN DPF+L+ + ++
Sbjct: 182 LVFCPLKRKQVRLNP---PMSDITEKQLYYAGTETDPDIALQLALGNCDPFTLKILHNFD 238
Query: 290 PDS-------------EENLPVTSIWSKQYE 307
PD+ + SIWSK+YE
Sbjct: 239 PDNIKDQVNKHNIWTQKSKFSQQSIWSKEYE 269
>gi|405966070|gb|EKC31392.1| Exonuclease 1 [Crassostrea gigas]
Length = 657
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 134/180 (74%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKY+ MLL +K ++VFDG HLP+K+ E+ RR+KR+ +K KAA+LL + +EA+ L
Sbjct: 60 MKYVEMLLKKNLKPVLVFDGCHLPSKKDVEKSRREKREINKKKAAQLLREGKRAEARECL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ +D++ MALN++ ACRARGVDCIVAP+EADAQ+AYLN G A +ITEDSDLL+FG
Sbjct: 120 QRCIDISPDMALNLMNACRARGVDCIVAPYEADAQLAYLNKCGIAQLIITEDSDLLLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+I+K+D GN +++ +L +++ +T KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 DKVIFKMDHFGNGVLIEQSRLNEVMEIQSGFYTFEKFRYMCILSGCDYLSSLQGIGLGKA 239
>gi|47207240|emb|CAF92263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1635
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 1/244 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++ MLL ++ I+VFDGR+LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVDMLLTFGVRPILVFDGRNLPSKQEVEKARRERRTANLQKGRQLLREGKISEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV +T MA +I+A RARGVDCIVAP+EADAQ+AYL A VITEDSDLL FG
Sbjct: 120 TRSVSITPAMAHRLIKAARARGVDCIVAPYEADAQLAYLTKCHLAQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ L + FT+ KFR+MCILSGCDY + G+GL KA
Sbjct: 180 KKVILKMDKHGNGLEIDQNNLGRCRSLGNV-FTEEKFRHMCILSGCDYLPSLHGIGLGKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD + + + + ++++ F N FLYQ V+DP+ +VV
Sbjct: 239 CKLLRLAKEPDILKVPKTSAAEPYLKMNLVVPEQYVEGFVRANNTFLYQLVFDPLGNKVV 298
Query: 241 PLNP 244
PLNP
Sbjct: 299 PLNP 302
>gi|432106297|gb|ELK32183.1| Exonuclease 1 [Myotis davidii]
Length = 942
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 171/297 (57%), Gaps = 22/297 (7%)
Query: 26 KEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDC 85
K A E K+R ++ K +LL + EA+ + V+VTH MA NVI+A RA+GVDC
Sbjct: 69 KLAKGEPTDKRRQANLLKGKQLLREGKVPEARECFTRCVNVTHAMAHNVIKAARAQGVDC 128
Query: 86 IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL 145
+VAP+EADAQ+AYLN AG ++TEDSDLL FG KK+I K+D GN +D+ +L
Sbjct: 129 LVAPYEADAQLAYLNKAGIVQAIVTEDSDLLAFGCKKVILKMDQFGNGLEIDQARL-GMC 187
Query: 146 KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKI 205
K FT+ KFRYMCILSGCDY + ++G+GL KA + +PD ++K+ Y K+
Sbjct: 188 KQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDIVKVIKKLGHYLKM 247
Query: 206 GSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELP 265
+ + ++++ F N FLYQ V+DP+ +++VPLN ++ + LS +
Sbjct: 248 N--ITVPEDYIKGFIRANNTFLYQLVFDPIRRKLVPLNDYGDDIDP---AALSYAGRYID 302
Query: 266 KDQAFQLALGNLDPFSLEEMDQWNPD----------------SEENLPVTSIWSKQY 306
A Q+ALGN D + E++D +NPD S++ V SIW + Y
Sbjct: 303 DSIALQIALGNKDINTFEQIDDYNPDTATPALSRSRSWDDSTSQKPSGVHSIWHRNY 359
>gi|156355443|ref|XP_001623677.1| predicted protein [Nematostella vectensis]
gi|156210399|gb|EDO31577.1| predicted protein [Nematostella vectensis]
Length = 306
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 154/247 (62%), Gaps = 4/247 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I+M+L H +K ++VFDG +LP+K E +RRK R+ +KA L ++AQ
Sbjct: 60 LKRINMMLFHDVKPVLVFDGAYLPSKANKEAERRKSRNENKANGLAFLRAGNRAKAQECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD++ MAL VI+ CR++GVDCIVAP+EADAQ+AYL VI+EDSDLLV+G
Sbjct: 120 QKCVDISPDMALEVIKMCRSKGVDCIVAPYEADAQLAYLMKKNIIQAVISEDSDLLVYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+++K+D SG + + L + + +FT KFR+MCILSGCDY IKG+GL KA
Sbjct: 180 KKVMFKMDASGYGTLVSLDHLSELTNLKMHEFTLEKFRHMCILSGCDYLPSIKGIGLIKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYG--KIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
+ + + A + + ++ ++ ++ SF + FLYQ V+DPVS E
Sbjct: 240 NKLLRN--SSNINKACINLTLVRNLRMDDQYRVPVDYEKSFKQADETFLYQRVFDPVSCE 297
Query: 239 VVPLNPL 245
+VPLNP+
Sbjct: 298 LVPLNPI 304
>gi|312082984|ref|XP_003143672.1| XPG I-region family protein [Loa loa]
gi|307761164|gb|EFO20398.1| XPG I-region family protein [Loa loa]
Length = 609
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 172/322 (53%), Gaps = 20/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ LLA +I+VFDG+ LPAK+ T RR+KRD HK + LL R SEA
Sbjct: 60 LKYVRALLAIGCHIILVFDGQMLPAKKETNSSRREKRDFHKQRGDLLLSEGRASEAYDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARG-VDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++S +T ++ IQA R VD IVAP+E+DAQ+ +L V+TEDSDL+ FG
Sbjct: 120 KRSTSLTPRVIETAIQAFRRLNMVDVIVAPYESDAQLTFLTKTKMVQAVVTEDSDLIAFG 179
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYW-TGIKGMGL 177
+KII+K+D SG+C D+ LP L LA+ F KFR +CILSGCDY G+ G+GL
Sbjct: 180 CEKIIFKMDPSGSCVIFDQNLLPRCLCRALAENFDFDKFRRICILSGCDYLQAGLPGVGL 239
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
KA + + L ++ Y S +K+TK+F+ F FLYQ V+DPV K
Sbjct: 240 NKAAAFFAKTDGRNLYQILPRLPRYLNKNS-LKVTKQFIDDFIRAENTFLYQIVFDPVEK 298
Query: 238 EV-----VPLNPLESEMRDEVFS-------QLSLKELELPKDQAFQLALGNLDPFSLEEM 285
PLNP +E DE S S P++ A ALGN+ S E
Sbjct: 299 RQRPLNDYPLNPQSNEDDDEFHSNSQRDDDHFSYAGSIQPQEIAMSFALGNIPGGSQTEQ 358
Query: 286 DQWNPDSEENLPVTSIWSKQYE 307
+ EN+P SIWS Y+
Sbjct: 359 ITLS----ENVPDWSIWSSNYK 376
>gi|324503167|gb|ADY41381.1| Exonuclease 1 [Ascaris suum]
Length = 708
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 184/341 (53%), Gaps = 36/341 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MKY+ +LLA VI+VFDG+ LPAK+ T RR+KRD HK K +LL + SEA
Sbjct: 60 MKYVKLLLAIHCHVILVFDGKPLPAKQETNIARREKRDEHKRKGEQLLSEGKTSEAFDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARG-VDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++S +T ++ + IQ + VD +VAP+E+DAQ+A+L G A V+TEDSDL+ FG
Sbjct: 120 KRSTSITREVVESTIQGFQGMDMVDILVAPYESDAQLAFLTKNGMAHAVVTEDSDLIAFG 179
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLA-KFTDAKFRYMCILSGCDYW-TGIKGMGL 177
++II+K++ +G+C ++ +LP L LA F KFR +CIL+GCDY +G+ G+GL
Sbjct: 180 CERIIFKMEATGSCTIYEQSQLPKCLCKALADDFDFTKFRRICILAGCDYLQSGLPGVGL 239
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
KA ++ D E L ++ Y + S +KI KEF+ F FLYQ VYDP +
Sbjct: 240 NKAATFMAKTSGSDLERILPRLPRYLNM-SNLKIKKEFIADFIRAENTFLYQIVYDPRLR 298
Query: 238 EVVPLN---PLESEMRDEVFSQLSLK----------ELELPKDQAFQLALGNL------- 277
PLN + DE F ++L + + A ++ALGNL
Sbjct: 299 RQRPLNDYPASDGTAEDEDFVGITLNGESQADYSYAGVIMSPIAAMRMALGNLPEGPPVC 358
Query: 278 DPFSL-EEMDQWNPDSEENLPVTSIWSKQYEKPCDRHSSEE 317
D F L E+ QW SIW+ ++ +R +E
Sbjct: 359 DKFVLSNEVAQW-----------SIWNPNFKSGAERMKVKE 388
>gi|358334576|dbj|GAA32605.2| exonuclease 1 [Clonorchis sinensis]
Length = 996
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 159/283 (56%), Gaps = 30/283 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ MLL IK I+VFDG LP+K TE R++ ++S++ KAAE L+ AQ
Sbjct: 60 LKYLEMLLTCNIKPILVFDGASLPSKADTELKRKESKESYRKKAAEYLLQGNREAAQECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SV VT KMA +V++A R GVDCIVAP+EADAQ+AYLN AGYAD VITEDSDLL+FG
Sbjct: 120 QRSVFVTSKMAHDVLKAARNLGVDCIVAPYEADAQLAYLNRAGYADLVITEDSDLLLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+++I+KLDL+G + L M +FTD+ RYM ILSGCDY++GI G+GL
Sbjct: 180 RQVIFKLDLTGAGVLVAVTAGIGELCCGMRPNQFTDSTLRYMGILSGCDYFSGIPGIGLA 239
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIG-----------------------SYVKITKEF 215
A + DF L K+ +Y + S TK
Sbjct: 240 TAAKILRQTRLSDFRELLSKLGLYTNLSPAALAASVPTASLAEKQTIASSRSGGTATKRL 299
Query: 216 LTSFHNTNL----MFLYQPVYDPVSKEVVPLN-PLESEMRDEV 253
+S + + F Q V+DP+++ L P + +M DEV
Sbjct: 300 QSSLIDAAVRAERTFRLQVVFDPLTRTQRRLTEPTQEDMADEV 342
>gi|400601842|gb|EJP69467.1| putative EXO1 protein [Beauveria bassiana ARSEF 2860]
Length = 769
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 166/285 (58%), Gaps = 10/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL IK MVFDG +LP+K ATE+ R KKR+ K A +L+ + +A
Sbjct: 60 MHRVRMLLHFGIKPYMVFDGDYLPSKAATEDSRAKKREEKKQLANDLMKAGKPGQATQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +IQ + G+ +VAP+EADAQ+ YL G D ++++DSDLLVFGA
Sbjct: 120 QKCVDITPEMASTLIQELKKMGISYVVAPYEADAQLVYLERKGLVDGILSDDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L ++D +FR M I+SGCDY G+ G+GLK A
Sbjct: 180 KRLLTKLDQYGNCIEINRRDFGACREVSLTGWSDTEFRRMAIMSGCDYLAGLPGVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + GK ++++ FLT F+ L FL+Q V+ PV K +V
Sbjct: 240 HRLMRKSKTP--ERVVRMLQFDGK-----RVSENFLTQFYQAELTFLHQWVFCPVQKGLV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L L+ E R +++ + D A +A G+L+P + E M
Sbjct: 293 HLTDLD-ETR--TAAEMPFIGAYVAPDIARGVAAGDLNPMTKEPM 334
>gi|402589958|gb|EJW83889.1| XPG I-region family protein [Wuchereria bancrofti]
Length = 608
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 178/327 (54%), Gaps = 30/327 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ LLA VI+VFDG+ LPAK+ T RR+KRD HK + L+ R SEA +
Sbjct: 60 LKYVKALLAIGCHVILVFDGQMLPAKKETNSSRREKRDFHKQRGDLLMSEGRASEAYNCF 119
Query: 61 RQSVDVTHKMALNVIQACRARG-VDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++S +T K+ + IQA R VD IVAP+E+DAQ+ +L A V+TEDSDL+ FG
Sbjct: 120 KRSATLTPKVIESAIQAFRRLNMVDVIVAPYESDAQLTFLTKTKMAQAVVTEDSDLIAFG 179
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYW-TGIKGMGL 177
+KII+K+D +G+C D+ LP L LA+ F KFR +CILSGCDY G+ G+GL
Sbjct: 180 CEKIIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRRICILSGCDYLQAGLPGVGL 239
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
KA + + L ++ Y S +K+TK+F+ F FLYQ V+DPV +
Sbjct: 240 NKAAAFFAKTNGRNLYQVLPRLPRYLNKNS-LKVTKQFIDDFIRAENTFLYQIVFDPVER 298
Query: 238 EVVPLN--PLE-------------SEMRDEVFSQL-SLKELELPKDQAFQLALGNL-DPF 280
PLN PL S+ D FS S++ E+ A ALGN+ F
Sbjct: 299 RQRPLNEYPLNQQSNEDGREFQSSSQESDNYFSYAGSIQSPEI----ATSFALGNIPGGF 354
Query: 281 SLEEMDQWNPDSEENLPVTSIWSKQYE 307
E++ EN+P SIWS Y+
Sbjct: 355 QTEQITL-----PENVPDWSIWSSNYK 376
>gi|170589924|ref|XP_001899723.1| XPG I-region family protein [Brugia malayi]
gi|158592849|gb|EDP31445.1| XPG I-region family protein [Brugia malayi]
Length = 603
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 175/326 (53%), Gaps = 28/326 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY+ LLA VI+VFDG+ LPAK+ T RR+KRD HK + L+ R SEA +
Sbjct: 60 LKYVKALLAIGCHVILVFDGQMLPAKKETNNSRREKRDFHKQRGDLLMSEGRASEAYNCF 119
Query: 61 RQSVDVTHKMALNVIQACRARG-VDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++S +T K+ N IQA R VD IVAP+E+DAQ+ +L A V+TEDSDL+ FG
Sbjct: 120 KRSATLTPKVIENAIQAFRHLNMVDVIVAPYESDAQLTFLTKTKMAQAVVTEDSDLIAFG 179
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYW-TGIKGMGL 177
+KII+K+D +G+C D+ LP L LA+ F KFR +CILSGCDY G+ G+GL
Sbjct: 180 CEKIIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRRICILSGCDYLQAGLPGVGL 239
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
KA + + L ++ Y S +K+TK+F+ F FLYQ +DPV K
Sbjct: 240 NKAAAFFAKTNGRNLYQVLPRLPRYLNKNS-LKVTKQFIDDFIRAENTFLYQIXFDPVEK 298
Query: 238 EVVPLN--PLE-------------SEMRDEVFSQL-SLKELELPKDQAFQLALGNLDPFS 281
PLN PL S+ D FS S++ E+ A ALGN+ S
Sbjct: 299 RQRPLNEYPLNQQSNEDDREFHSSSQESDNYFSYAGSIQSPEI----ATSFALGNIPGSS 354
Query: 282 LEEMDQWNPDSEENLPVTSIWSKQYE 307
E EN+P SIWS Y+
Sbjct: 355 QIEQITL----PENVPDWSIWSSNYK 376
>gi|392577150|gb|EIW70280.1| hypothetical protein TREMEDRAFT_43853 [Tremella mesenterica DSM
1558]
Length = 361
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 147/243 (60%), Gaps = 7/243 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L H I +VFDG LPAK+ TE R K R + A+A + R EA+
Sbjct: 60 MHRVRLLKHHGITPFIVFDGGPLPAKKGTEVSRAKSRAEYLARAQSMESQGRWKEARECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VD+T +MA +I+A RA G++ +VAP+EADAQ+ +L G+ D +ITEDSDLLVFG
Sbjct: 120 TKCVDITPEMAYQLIKALRAEGIEYVVAPYEADAQLCFLEREGWVDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K++++KLD +G C ++ RE+L S P+ +TD FR M +LSGCDY I+G+G+K A
Sbjct: 180 KQVVFKLDHNGQCVWIHRERLASIRDFPMHGWTDHHFRRMAMLSGCDYLDSIQGIGIKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ E L+ + + G + + K+++ F+ L F++Q VYDP SK +V
Sbjct: 240 HRLLRK--HKTVEKVLQNVRLDG-----MNVPKDYVKMFNQAELAFIHQRVYDPGSKRLV 292
Query: 241 PLN 243
PLN
Sbjct: 293 PLN 295
>gi|449680108|ref|XP_002160163.2| PREDICTED: exonuclease 1-like [Hydra magnipapillata]
Length = 687
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 161/281 (57%), Gaps = 9/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ ++ML+ + I I+VFDG HLPAK E++RR+KR ++A+A E L EA
Sbjct: 60 MRRVNMLINYDITPILVFDGGHLPAKSEKEKERREKRIEYRARALEALRNGNSKEAFESF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ D+T +MA NVIQAC V CIVAP+EADAQ+A+L +G I+EDSDLL++G
Sbjct: 120 QKCCDITPEMAANVIQACFEMNVQCIVAPYEADAQLAFLMKSGITQLTISEDSDLLLYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K++YK+ G+ +D + L + L+ FT FR MC+LSGCDY IKGMGLKKA
Sbjct: 180 NKVLYKMSSEGDGMLVDIDNLSKVRSVQLSSFTLDNFRQMCMLSGCDYLPSIKGMGLKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + + +R K + E+ +F L+F YQ V+DP+ K +V
Sbjct: 240 HQAL--KRHSNIKQCIRSF----KCNPQYSVPDEYEDNFCKAELVFKYQLVFDPIRKCIV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
PLN + E+ E K + D A +ALGN+DP S
Sbjct: 294 PLNEPDEELNIEDTHYCGPK---ITDDLALNIALGNIDPIS 331
>gi|322799338|gb|EFZ20726.1| hypothetical protein SINV_14613 [Solenopsis invicta]
Length = 608
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 162/285 (56%), Gaps = 39/285 (13%)
Query: 40 HKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYL 99
++ KA EL+ + + +E + LR++VD+THK+AL +I+ C+ +DCI+AP+EADAQ+AYL
Sbjct: 2 NRRKAMELIQMGKIAEGSNLLRRAVDITHKIALELIKECQRENIDCIIAPYEADAQLAYL 61
Query: 100 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 159
NI+G AD VITEDSDL +FG KKI +K+D++GN ++R+ L A+ + +F KFR+
Sbjct: 62 NISGIADVVITEDSDLTLFGCKKIFFKMDINGNGVLIERDLLHLAMDVRPEQFDMDKFRH 121
Query: 160 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITK------ 213
+ ILSGCDY + G+GL KA+ ++ D N R IN + +TK
Sbjct: 122 IGILSGCDYLPSLPGIGLGKARKFITRNTD---HNIHRVINTFLNFSRRTVLTKILYKCE 178
Query: 214 ---------------------------EFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLE 246
E+ SF ++ F +Q V+ P+ ++ + LNP
Sbjct: 179 EKSIILKCYALVRVGSVLNMKGLVVPPEYRDSFILADITFKHQLVFCPLQRKQIRLNPPP 238
Query: 247 SEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
+++ ++ QL EL D A QLALGN DP +LE + +NPD
Sbjct: 239 ADVTED---QLQYAGEELDADLALQLALGNCDPATLEMVHNFNPD 280
>gi|256072777|ref|XP_002572710.1| exonuclease [Schistosoma mansoni]
gi|353229077|emb|CCD75248.1| putative exonuclease [Schistosoma mansoni]
Length = 728
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 140/208 (67%), Gaps = 1/208 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KYI+++ + +K I+VFDG LP+K T+ RR+ ++ ++ KAAE L+ + AQ
Sbjct: 60 IKYINLMKSCNVKPILVFDGSDLPSKAETDLKRRETKELNRKKAAEYLMKGDKAAAQECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV VT +MA V++A R GVDC+VAP+EADAQ+AYLN GYAD+VITEDSDLL+FG
Sbjct: 120 ERSVFVTSEMAYEVLRAARNMGVDCVVAPYEADAQLAYLNRTGYADFVITEDSDLLLFGC 179
Query: 121 KKIIYKLDLSGNCCFM-DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+++++KLDLSG+ + + +P ++FT++KFRYM I++GCDY++GI G+GL
Sbjct: 180 RQVVFKLDLSGSGVLVAAASGICECCGIPASQFTESKFRYMGIMAGCDYFSGIPGIGLNT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGS 207
A + +F L K+ Y K+ +
Sbjct: 240 AAKILRQTRITNFRELLLKLGFYTKLSN 267
>gi|390334353|ref|XP_001198417.2| PREDICTED: uncharacterized protein LOC762697 isoform 1
[Strongylocentrotus purpuratus]
Length = 964
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 146/244 (59%), Gaps = 11/244 (4%)
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
MALNV++A R+ GVDCIVAP+EADAQ+AYL G+ VITEDSDL+ FG KK+I KLDL
Sbjct: 1 MALNVMKAVRSLGVDCIVAPYEADAQLAYLEKNGFVQAVITEDSDLIAFGCKKVIVKLDL 60
Query: 130 SGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 189
+GNC +D +L A+K+ KFT KFRYMCI++GCDY + G+G+ KA+ +
Sbjct: 61 AGNCMDVDSSRLNVAMKIG-EKFTPEKFRYMCIVAGCDYLASLPGIGIGKARKLFQLTAN 119
Query: 190 PDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEM 249
PD ++++ K+ S +T E+ F N FLYQ +DP K++ PL P E+
Sbjct: 120 PDITQVIKRMATTLKMKSTT-VTPEYQEGFVQANNTFLYQLAFDPQKKKLQPLTPYSPEV 178
Query: 250 RDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP------DSEENLPVTSIWS 303
+ E+ +A+Q+ALGN++ ++E + +NP D + + SIW
Sbjct: 179 TPATLTYAGKYVDEV---KAYQMALGNINFDTMERIADFNPMVNKPYDKKTPRHLLSIWH 235
Query: 304 KQYE 307
K ++
Sbjct: 236 KDFQ 239
>gi|159127722|gb|EDP52837.1| exonuclease, putative [Aspergillus fumigatus A1163]
Length = 658
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 163/285 (57%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG +LP+K TE +R +KR++ KA EL R +EA L
Sbjct: 60 LNRVRMLLYFGVTPYLVFDGDNLPSKSGTESERLQKREASKALGLELQRKGRMAEAYQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPYMARQLIEELKKMEVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C +DR + ++ L +TDA FR MCILSGCDY I MGLK A
Sbjct: 180 KRLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCILSGCDYLPNIPRMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + +L +F L FLYQ V+ P + ++V
Sbjct: 240 YRSIRKYK--NVEKALRMLQFDGQF----HVPAGYLENFKQAELTFLYQRVFCPKAGKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
PL E +D +L ++ + A +ALG+LDP + E++
Sbjct: 294 PLTQPE---KDVNLEELPFIGRDVDAEIALGVALGDLDPTTKEQI 335
>gi|70999992|ref|XP_754713.1| exonuclease [Aspergillus fumigatus Af293]
gi|66852350|gb|EAL92675.1| exonuclease, putative [Aspergillus fumigatus Af293]
Length = 658
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 163/285 (57%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG +LP+K TE +R +KR++ KA EL R +EA L
Sbjct: 60 LNRVRMLLYFGVTPYLVFDGDNLPSKSGTESERLQKREASKALGLELQRKGRMAEAYQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPYMARQLIEELKKVEVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C +DR + ++ L +TDA FR MCILSGCDY I MGLK A
Sbjct: 180 KRLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCILSGCDYLPNIPRMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + +L +F L FLYQ V+ P + ++V
Sbjct: 240 YRSIRKYK--NVEKALRMLQFDGQF----HVPAGYLENFKQAELTFLYQRVFCPKAGKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
PL E +D +L ++ + A +ALG+LDP + E++
Sbjct: 294 PLTQPE---KDVNLEELPFIGRDVDAEIALGVALGDLDPTTKEQI 335
>gi|403179055|ref|XP_003337407.2| hypothetical protein PGTG_19001 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164590|gb|EFP92988.2| hypothetical protein PGTG_19001 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 685
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 163/284 (57%), Gaps = 10/284 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ IH+L + +VFDG HLP+K+ TE+DR +R + A A +LL A+
Sbjct: 60 VQKIHLLHRFGVSAYVVFDGDHLPSKKVTEDDRENRRRTALANAQKLLAQGDQKRAREEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++VDVT ++A +VI A R+ GV +VAP+EADAQ+ YL + G +ITEDSDLLV+GA
Sbjct: 120 VKAVDVTPRLAHDVILALRSMGVKYVVAPYEADAQLRYLEMKGEVHGIITEDSDLLVYGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +++K+D SG+C + R++L + + + +FR M +LSGCDY + I G+G+KKA
Sbjct: 180 RNVLFKMDPSGHCIHICRDELGQVHDKRMGLWDERQFRQMAMLSGCDYLSSIPGLGIKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
D + E A++ + GK+ + ++ SF L F +Q VYDP ++ ++
Sbjct: 240 HDLIRRHQ--TAERAIKATRLDGKL----PVPPKYEQSFREAELTFEHQFVYDPTTRTMI 293
Query: 241 PLNPL-ESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
PL PL ES + + K P A +A G +DP + E
Sbjct: 294 PLTPLPESPPSPQALAGCGEK---WPDQIAIDVAEGRVDPMTKE 334
>gi|428184049|gb|EKX52905.1| EXO1 exonuclease 1 DNA repair [Guillardia theta CCMP2712]
Length = 353
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 164/281 (58%), Gaps = 16/281 (5%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ MLL +K+ +MVFDG +LP+K+ TE DR+ R +++K + L D S A + +++
Sbjct: 63 VKMLLHYKVIPVMVFDGANLPSKQGTEVDRKLSRLENRSKGIQALRADNRSAAIEYFQRA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+A R V+CIVAP+EADAQ+AYLN+ GY VI+EDSD++ FGAK +
Sbjct: 123 VDVTPAMAYKLIKALRKLNVECIVAPYEADAQLAYLNLQGYVSAVISEDSDIIAFGAKAV 182
Query: 124 IYKLDLSG---NCCFMDREKLPSALK-MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+ K+D G + C R+KL A M L+ + +F MCI +GCDY + GMG+KK
Sbjct: 183 LLKMDKDGYGEDTCPRYRQKLLGACSTMNLSGWEPERFTQMCIFAGCDYLKSLPGMGIKK 242
Query: 180 AKDYVFSI------MDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
A + +I +D F A+ K+ + G + + ++L F L F +Q V+D
Sbjct: 243 AYAAINNIGGQRAPLDECFVRAINKLRLDGTL-----VPSDYLKDFERAYLTFQFQRVFD 297
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLAL 274
P + +V L PL E+RD F+ L ++ L Q LA+
Sbjct: 298 PEKQMLVTLKPL-PEVRDTSFNHLDIQAPLLSSRQKHPLAV 337
>gi|145531403|ref|XP_001451468.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419123|emb|CAK84071.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 150/249 (60%), Gaps = 6/249 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + L + I V+MVFDG LP+K++TEE+R K+R+ + K E L +A S L
Sbjct: 60 LKKVEQLKKYNITVVMVFDGAKLPSKKSTEEEREKRRNDNLQKHLEFKQLGEKDKAYSKL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+DVT +MA ++ A R R ++CIVAP+EADAQ+AYL+I Y D +ITEDSDL+ +GA
Sbjct: 120 VESIDVTPQMASRLLDALRTRNIECIVAPYEADAQLAYLSITEYVDVIITEDSDLIAYGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+K++YKLD G +D E + + + + KF CILSGCDY I G+G+K+A
Sbjct: 180 RKVLYKLDKFGYGEEIDYESIQTCTEYNFQNWHHQKFLTFCILSGCDYLGSISGIGIKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y +++ A+ + K V + +++ F L FL+Q V+ PV +++V
Sbjct: 240 --YQVVATSQNYKQAIDNLQRKQK----VSVPFDYVEQFEKAYLTFLFQRVFCPVQRKMV 293
Query: 241 PLNPLESEM 249
+N ++++
Sbjct: 294 SVNTFDTDL 302
>gi|60102674|gb|AAX14025.1| exonuclease [Monascus pilosus]
Length = 678
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 160/274 (58%), Gaps = 9/274 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
ML+ + +VFDG +LP+K TE +R+KKR+ KA EL R +EA L+++VD
Sbjct: 1 MLIFFGVTPYLVFDGDNLPSKSGTESERQKKREESKALGLELYKKGRVAEAYQELQKAVD 60
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT MA +I+ + V+ +VAP+EADAQ+ +L G + +I+EDSD+LVFGA++++
Sbjct: 61 VTPYMARQLIEELKKMKVEYVVAPYEADAQLVFLERQGIINGIISEDSDMLVFGARRLLS 120
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +GLK A +
Sbjct: 121 KLDQHGDCIEINRADFAACKEVSLVGWTDADFRRMCILSGCDYLPNISKLGLKTAYRSIR 180
Query: 186 SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPL 245
+ D ALR + + G+ ++ ++L +F L FLYQ V+ P + ++VPL P
Sbjct: 181 KYKNVD--KALRMLQLEGQY----RVPADYLENFKQAELTFLYQRVFCPTAGKLVPLTPP 234
Query: 246 ESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
E D L+ ++ D A +A G+LDP
Sbjct: 235 E---MDVTLENLTFIGDDMDPDIATGVARGDLDP 265
>gi|403411526|emb|CCL98226.1| predicted protein [Fibroporia radiculosa]
Length = 743
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 166/297 (55%), Gaps = 15/297 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L ++IK +VFDG LPAK+ TE DR+K+RD + A+A L + +A+ +
Sbjct: 1 MHRVRLLQHYRIKPYIVFDGGPLPAKQGTESDRKKRRDENLARANALAAQGKHGQAREYY 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA +I+A RA V +VAP+EADAQ+AYL G D +ITEDSDLLVFG
Sbjct: 61 VKCIDVTPQMAYQLIKALRAESVPYVVAPYEADAQLAYLERIGIVDGIITEDSDLLVFGC 120
Query: 121 KKIIYKLD-LSGNCCFMDREKLPSALK-----MPLAKFTDAKFRYMCILSGCDYWTGIKG 174
KK+++KLD S + R S + L ++D +FR M ILSGCDY I+G
Sbjct: 121 KKVLFKLDPTSATIICVSRADFASVTSGSSGGISLLGWSDVQFRSMAILSGCDYLPSIQG 180
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+GLK A + EN +R +N+ GK K+ +L +F +FLYQ VYDP
Sbjct: 181 IGLKTAHSLLRKYK--TVENVIRALNLEGK----KKVPSNYLQAFRKAEKVFLYQRVYDP 234
Query: 235 VSKEVVPL-NPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
+ +V L +P E+ DE LE A Q+A G+ P SL M+ NP
Sbjct: 235 TQEMLVYLSDPPAGELWDEETEAYVGTNLEA--SLAKQVAEGDACPISLLPMEDINP 289
>gi|321252528|ref|XP_003192437.1| exonuclease [Cryptococcus gattii WM276]
gi|317458905|gb|ADV20650.1| Exonuclease, putative [Cryptococcus gattii WM276]
Length = 1015
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 164/295 (55%), Gaps = 14/295 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + L H I+ +VFDG LPAK+ TE R K R + KA L R EA+
Sbjct: 60 MYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKSRLENLEKARSLEAQGRIKEAKEAY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A RA VD +VAP+EADAQ+ +L GY D +ITEDSDLLVFG
Sbjct: 120 TRCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQLCFLEREGYVDGIITEDSDLLVFGC 179
Query: 121 K---KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
K ++I+KLD G C ++ R++L + P+ +TD FR M +LSGCDY I G+G+
Sbjct: 180 KRASRVIFKLDKDGQCVWIHRDRLAKVREFPMHGWTDMHFRRMAMLSGCDYLDSIPGIGI 239
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKI-GSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
K A + N++ K+ + ++ G+Y+ I +L+ F L FLYQ VYDP
Sbjct: 240 KTAHRLMRRF------NSVEKLLQHIRLEGTYL-IPPTYLSDFAQAELAFLYQRVYDPSL 292
Query: 237 KEVVPLNPLESEMRDEVFSQLSLK--ELELPKDQAFQLALGNLDP-FSLEEMDQW 288
+V LNPL + K +++ + A ++A G++ P LE +D W
Sbjct: 293 GRLVHLNPLPPTTTGFQLGEEGEKWVGVDVEEGLARRMARGDVHPETGLEIVDGW 347
>gi|119492135|ref|XP_001263538.1| exonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119411698|gb|EAW21641.1| exonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 658
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 163/285 (57%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG +LP+K TE +R +KR + KA EL R +EA L
Sbjct: 60 LNRVRMLLYFGVTPYLVFDGDNLPSKSGTESERLQKRQASKALGLELQRKGRMAEAYQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPYMARQLIEELKKMEVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I MGLK A
Sbjct: 180 KRLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLPNIPRMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + ++L +F L FLYQ V+ P + ++V
Sbjct: 240 YRSIRKYK--NVEKALRMLQFDGQF----HVPADYLENFKQAELTFLYQRVFCPKAGKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
PL E +D +L ++ + A +ALG+LDP + +++
Sbjct: 294 PLTQPE---KDVNLEELPFIGRDVDAEIALGVALGDLDPTTKKQI 335
>gi|320035457|gb|EFW17398.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 736
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 29/303 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + + +VFDG LP+K++TEE R +R+ K EL R S+AQ L
Sbjct: 60 MHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 120 QKAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK
Sbjct: 180 KVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLK-- 237
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITK---------EFLTSFHNTNLMFLYQPV 231
A RK+ Y + VKI + +L F+ L FL+Q V
Sbjct: 238 -------------TAYRKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFNRAELTFLHQRV 284
Query: 232 YDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
+ P ++++V LNPL + L+ ++ D A +A G+LDP + +E+ + NP
Sbjct: 285 FCPRARKLVTLNPLP----NSAHEGLTFIGNDIEPDIAIGIACGDLDPIT-QEVIKINPS 339
Query: 292 SEE 294
E
Sbjct: 340 YPE 342
>gi|295668435|ref|XP_002794766.1| DNA damage-inducible protein DIN7 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285459|gb|EEH41025.1| DNA damage-inducible protein DIN7 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 827
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 159/285 (55%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL I +VFDG +LP+K TE R K+R+ K EL R EAQ L
Sbjct: 1 MNRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRREESKRLGLELFHAGRLFEAQQEL 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT MA +I+ + V IVAP+EADAQ+ YL G D +I+EDSD+LVFGA
Sbjct: 61 QKAIDVTPYMARLMIEELKRVKVQYIVAPYEADAQLVYLERQGIIDGIISEDSDMLVFGA 120
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA+FR MCILSGCDY + MGLK A
Sbjct: 121 KRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRMGLKTA 180
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ E ++ I G GS ++ ++L F FL+Q V+ PV++++V
Sbjct: 181 YRNIRKYK--TVEKTMKMIQFEG--GS--RVPPQYLEDFKRAEFTFLHQLVFCPVARKLV 234
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L+PL +M + ++ D A +A G+LDP + E +
Sbjct: 235 TLSPLSGDM---TLESMPFVGADIDPDTAIGIACGDLDPRTKEAI 276
>gi|196007442|ref|XP_002113587.1| hypothetical protein TRIADDRAFT_26121 [Trichoplax adhaerens]
gi|190583991|gb|EDV24061.1| hypothetical protein TRIADDRAFT_26121 [Trichoplax adhaerens]
Length = 326
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 148/249 (59%), Gaps = 10/249 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK I ML+ +K IMVFDG HLP+K EE+R+ R +K+K E L D+ +A
Sbjct: 60 MKRIEMLINFNVKPIMVFDGGHLPSKMQKEEERKLNRQFNKSKGIEYLRQDKYIDALDCF 119
Query: 61 RQSVDVTHKMALNVIQA-----CRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
R++VD+T MAL +I+A + ++CIVAP+EADAQ+AYL+ A D VITEDSDL
Sbjct: 120 RRAVDITPAMALELIKARLELIQNLKDIECIVAPYEADAQLAYLSKADLVDAVITEDSDL 179
Query: 116 LVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
LVFG KK+++KLD +G + ++L + L FR++CILSGCDY I GM
Sbjct: 180 LVFGCKKVLFKLDPNGRGIEIRLDRLREVKDIDLNGVDHEAFRHICILSGCDYLPSIPGM 239
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GLK A + IM + I Y + + +K+ K + T F + FLYQ V+DPV
Sbjct: 240 GLKTA----YKIMKRNRMKVYSAIK-YIRRQNTMKVPKNYETQFKMADETFLYQVVFDPV 294
Query: 236 SKEVVPLNP 244
+K +PL P
Sbjct: 295 TKTTIPLTP 303
>gi|303315399|ref|XP_003067707.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107377|gb|EER25562.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 736
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 29/303 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + + +VFDG LP+K++TEE R +R+ K EL R S+AQ L
Sbjct: 60 MHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 120 QKAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK
Sbjct: 180 KVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLK-- 237
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITK---------EFLTSFHNTNLMFLYQPV 231
A RK+ Y + VKI + +L F+ L FL+Q V
Sbjct: 238 -------------TAYRKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFNRAELTFLHQRV 284
Query: 232 YDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
+ P ++++V LNPL + L+ ++ D A +A G+LDP + +E+ + NP
Sbjct: 285 FCPRARKLVTLNPLP----NSAHEGLTFIGNDIEPDIAIGIACGDLDPIT-QEVIKINPS 339
Query: 292 SEE 294
E
Sbjct: 340 YPE 342
>gi|119190955|ref|XP_001246084.1| hypothetical protein CIMG_05525 [Coccidioides immitis RS]
Length = 677
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 162/303 (53%), Gaps = 29/303 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + + +VFDG LP+K++TEE R +R+ K EL R S+AQ L
Sbjct: 1 MHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQEL 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 61 QKAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGA 120
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK
Sbjct: 121 KVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLK-- 178
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITK---------EFLTSFHNTNLMFLYQPV 231
A RK+ Y + VKI + +L F L FL+Q V
Sbjct: 179 -------------TAYRKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFKRAELTFLHQRV 225
Query: 232 YDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
+ P ++++V LNPL + L+ ++ D A +A G+LDP + +E+ + NP
Sbjct: 226 FCPRARKLVTLNPLP----NSAHEGLTFIGNDIEPDIAIGIACGDLDPIT-QEVIKINPS 280
Query: 292 SEE 294
E
Sbjct: 281 YPE 283
>gi|392868930|gb|EAS30280.2| exonuclease [Coccidioides immitis RS]
Length = 736
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 29/303 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + + +VFDG LP+K++TEE R +R+ K EL R S+AQ L
Sbjct: 60 MHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARREESKRLGLELYRTGRTSQAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 120 QKAVDVTPYMARMLIEELKKLNVQYIVAPYEADAQLVYLEKEGIVNGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK
Sbjct: 180 KVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLK-- 237
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITK---------EFLTSFHNTNLMFLYQPV 231
A RK+ Y + VKI + +L F L FL+Q V
Sbjct: 238 -------------TAYRKLRRYKTVEKVVKIVQFEGQSRVPPNYLEEFKRAELTFLHQRV 284
Query: 232 YDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
+ P ++++V LNPL + + L+ ++ D A +A G+LDP + +E+ + NP
Sbjct: 285 FCPRARKLVTLNPLPNSAHE----GLTFIGNDIEPDIAIGIACGDLDPIT-QEVIKINPS 339
Query: 292 SEE 294
E
Sbjct: 340 YPE 342
>gi|322694691|gb|EFY86514.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 751
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 160/282 (56%), Gaps = 12/282 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML I MVFDG +LP+K ATE R K+R+ K A +LL + S+A
Sbjct: 60 MHRVRMLQHFGITPYMVFDGDYLPSKAATENSRAKRREEKKKLANDLLKAGKTSQAAQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA +IQ + G+ +VAP+EADAQ+ YL G + +I++DSDLLVFGA
Sbjct: 120 QNCIDVTPEMASTLIQQLKQMGIPYVVAPYEADAQLVYLERQGLVNGIISDDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L +TDA FR M I+SGCDY G+ G+GLK A
Sbjct: 180 KRLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLDGLPGVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + GK +I++ +LT F+ L FL+Q V+ P +E+V
Sbjct: 240 YRMLRKSKSP--ERVVRLLQFNGK-----RISENYLTQFYQAELTFLHQWVFCPKKRELV 292
Query: 241 PLNPLESEMRDEVFSQL-SLKELELPKDQAFQLALGNLDPFS 281
L L+ E + + E EL A +A G++DP +
Sbjct: 293 HLTELDGTRTAEEMPFIGAYVEPEL----ARAIAKGDVDPIT 330
>gi|195579936|ref|XP_002079812.1| GD21820 [Drosophila simulans]
gi|194191821|gb|EDX05397.1| GD21820 [Drosophila simulans]
Length = 604
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 144/245 (58%), Gaps = 9/245 (3%)
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
MAL +I+ CR+R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGAK II+KLDL
Sbjct: 1 MALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAKNIIFKLDL 60
Query: 130 SGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 189
+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA ++
Sbjct: 61 NGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKACKFILKTEQ 120
Query: 190 PDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEM 249
D AL+KI Y + + +++ +++ +F F + +Y+P+ + + L LE
Sbjct: 121 EDMRIALKKIPSYLNMRN-LEVDDDYIENFMKAEATFRHMFIYNPLERRMQRLCSLEDYE 179
Query: 250 RDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT-------SIW 302
DE + + LE QA LALGNL+PF+++ +D W P+ P SIW
Sbjct: 180 TDERYCSNAGTLLE-DSVQALHLALGNLNPFTMKRLDSWTPEKAWPTPKNVKRSKHKSIW 238
Query: 303 SKQYE 307
++
Sbjct: 239 QTNFQ 243
>gi|350633529|gb|EHA21894.1| 5'-3' exonuclease [Aspergillus niger ATCC 1015]
Length = 672
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 161/285 (56%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG LP+K TE +R+K+R KA EL R +EA L
Sbjct: 56 LNRVRMLLYFGVTPYLVFDGDELPSKAGTEVERQKRRQDSKALGLELQRKGRIAEAYQEL 115
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+AYL G +I+EDSDLLVFGA
Sbjct: 116 QKAVDVTPLMARELIEELKKINVQYVVAPYEADAQLAYLERQGVISGIISEDSDLLVFGA 175
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + ++ L +TD FR MCILSGCDY I +GLK A
Sbjct: 176 KRLLSKLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCILSGCDYLPNIARLGLKTA 235
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + ++L +F L FLYQ V+ P + ++V
Sbjct: 236 YRSIRKYK--NVERALRMLQFDGQY----HVPSDYLDNFRQAELTFLYQRVFCPKAGKLV 289
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L P E+E+ + L+ ++ D A +A G+LDP + E +
Sbjct: 290 TLTPPEAEI---ILEDLTFIGGDVEPDIAVGVARGDLDPTTKEPL 331
>gi|225678637|gb|EEH16921.1| exodeoxyribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 701
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 157/285 (55%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL I +VFDG +LP+K TE R K+R+ K EL R EAQ L
Sbjct: 60 MNRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRREESKRLGLELFHAGRIFEAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT MA +I+ + V IVAP+EADAQ+ YL G D +I+EDSD+LVFGA
Sbjct: 120 QKAIDVTPYMARLMIEELKRVKVQYIVAPYEADAQLVYLERQGIIDGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA+FR MCILSGCDY + MGLK A
Sbjct: 180 KRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ E ++ I G GS ++ ++L F FL+Q V+ PV++ +V
Sbjct: 240 YRNIRKYK--TVEKTMKMIQFEG--GS--RVPPQYLEDFKRAEFTFLHQLVFCPVARRLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L+PL M + ++ D A +A G+LDP + E +
Sbjct: 294 TLSPLSGNM---TLESMPFVGADIDPDTAIGIACGDLDPRTKEAI 335
>gi|145252118|ref|XP_001397572.1| exonuclease [Aspergillus niger CBS 513.88]
gi|134083116|emb|CAK46789.1| unnamed protein product [Aspergillus niger]
Length = 758
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 161/285 (56%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG LP+K TE +R+K+R KA EL R +EA L
Sbjct: 60 LNRVRMLLYFGVTPYLVFDGDELPSKAGTEVERQKRRQDSKALGLELQRKGRIAEAYQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+AYL G +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPLMARELIEELKKINVQYVVAPYEADAQLAYLERQGVISGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + ++ L +TD FR MCILSGCDY I +GLK A
Sbjct: 180 KRLLSKLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCILSGCDYLPNIARLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + ++L +F L FLYQ V+ P + ++V
Sbjct: 240 YRSIRKYK--NVERALRMLQFDGQY----HVPSDYLDNFRQAELTFLYQRVFCPKAGKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L P E+E+ + L+ ++ D A +A G+LDP + E +
Sbjct: 294 TLTPPEAEI---ILEDLTFIGGDVEPDIAVGVARGDLDPTTKEPL 335
>gi|322708110|gb|EFY99687.1| exonuclease, putative [Metarhizium anisopliae ARSEF 23]
Length = 751
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 182/334 (54%), Gaps = 33/334 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + MVFDG LP+K ATE+ R K+R+ K A +LL + S+A
Sbjct: 60 MHRVRMLQHFGVTPYMVFDGDFLPSKAATEDSRAKRREEKKKLANDLLKAGKTSQAAQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ +DVT +MA +IQ + G+ +VAP+EADAQ+ YL G + +I++DSDLLVFGA
Sbjct: 120 QKCIDVTPEMASTLIQELKQMGIPYVVAPYEADAQLVYLERQGLVNGIISDDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L +TDA FR M I+SGCDY G+ G+GLK A
Sbjct: 180 KRLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLNGLPGVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E A+R + GK +I++ +LT F+ L FL+Q V+ P E+V
Sbjct: 240 YRMLRKSKSP--EAAVRLLQFDGK-----RISENYLTQFYQAELTFLHQWVFCPKKSELV 292
Query: 241 PLNPLE-SEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT 299
L L+ + DE+ + E EL A +A G++ NP ++ + +
Sbjct: 293 HLTELDGTRTADEMPFIGAYVEPEL----ARAIAKGDV-----------NPITKSPIVIA 337
Query: 300 SIWSKQYEKPCDRHSSEESVSEPPVFQKLKPVAS 333
+ SK+ RHS + ++PP KP+ S
Sbjct: 338 TTPSKR------RHSQTATQTQPP----RKPITS 361
>gi|353240941|emb|CCA72785.1| related to EXO1-exonuclease which interacts with Msh2p
[Piriformospora indica DSM 11827]
Length = 827
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 161/296 (54%), Gaps = 18/296 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I +L + I+ +VFDG LPAKE TE +RRK R+ AKA +L R SEA+
Sbjct: 60 MHRIRLLRYYGIEPYLVFDGGPLPAKEGTELERRKNREESLAKAKQLASRGRHSEARDLY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VD++ K A +I+A RA V +VAP+EADAQ+AYL +G ++TEDSDLLVFG
Sbjct: 120 ARCVDISPKHAFQLIKALRAESVAYVVAPYEADAQLAYLERSGIVQGILTEDSDLLVFGC 179
Query: 121 KKIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+ + +KLD S + R K + LA +TD +FR+M ++SGCDY G+KG+G++
Sbjct: 180 QNVYFKLDTSTYTVAHIARAKFSQVTDINLALWTDTEFRHMAMMSGCDYLEGLKGIGVRT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A + E L+ I + K ++ K +L +F L FLYQ VYD K +
Sbjct: 240 ANKLLRKYK--SLERVLKFIALESKTA---RVPKGYLEAFRKAELAFLYQRVYDSTQKRL 294
Query: 240 V-----PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
V P L E D++F ELP D A +A G+ P S E + NP
Sbjct: 295 VHLVEPPSTGLSEE--DDLFVG-----RELPLDLAQNIATGDYCPLSHEPIVDINP 343
>gi|226295014|gb|EEH50434.1| exonuclease [Paracoccidioides brasiliensis Pb18]
Length = 879
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 157/285 (55%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL I +VFDG +LP+K TE R K+R+ K EL R EAQ L
Sbjct: 60 MNRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRREESKRLGLELFHAGRIFEAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT MA +I+ + V IVAP+EADAQ+ YL G D +I+EDSD+LVFGA
Sbjct: 120 QKAIDVTPYMARLMIEELKRVKVQYIVAPYEADAQLVYLERQGIIDGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA+FR MCILSGCDY + MGLK A
Sbjct: 180 KRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ E ++ I G GS ++ ++L F FL+Q V+ PV++ +V
Sbjct: 240 YRNIRKYK--TVEKTMKMIQFEG--GS--RVPPQYLEDFKRAEFTFLHQLVFCPVARRLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L+PL M + ++ D A +A G+LDP + E +
Sbjct: 294 TLSPLSGNM---TLESMPFVGADIDPDTAIGIACGDLDPRTKEAI 335
>gi|440803854|gb|ELR24737.1| XPG Iregion domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 832
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 159/302 (52%), Gaps = 30/302 (9%)
Query: 5 HMLLAHKIKVIMVFDGRHLPAKEATEEDRRK-----------------KRDSHKAKAAEL 47
++L + I ++VFDG LP+K+ EE RRK KR +AKAAE
Sbjct: 16 NLLRSFNITPVLVFDGGALPSKKGQEEKRRKYFSPPPAILPTACEFVGKRREERAKAAEY 75
Query: 48 LILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADY 107
L + A R++VD+T +MA +I+A +A G++CIVAP+EADAQ+A+L+ GY
Sbjct: 76 LQQGNRTAANDCYRKAVDITPRMAHKLIKALQAEGIECIVAPYEADAQLAFLSHTGYVHS 135
Query: 108 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
VI+EDSDLL FG K++++K+D GN + L + FT FR MCILSGCD
Sbjct: 136 VISEDSDLLPFGCKRVLFKMDGDGNGKEIQLSDLGQNTPLRFHNFTHDMFRQMCILSGCD 195
Query: 168 YWTGIKGMGLKKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLM 225
Y I G+G+KKA + + MD ++ + K + E+ +F
Sbjct: 196 YLASITGLGVKKAHGLLNKYRTMD--------RVFRFLKNDRSFIVPPEYEEAFERAERT 247
Query: 226 FLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
FL+Q VYD +++ V+PL P M F +P D A +A G +DP+S E
Sbjct: 248 FLHQSVYDHINQRVIPLTPYPDGMDSSAFPFCGAL---IPDDLARLIASGQVDPYSYEPF 304
Query: 286 DQ 287
++
Sbjct: 305 EE 306
>gi|145532383|ref|XP_001451947.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419624|emb|CAK84550.1| unnamed protein product [Paramecium tetraurelia]
Length = 570
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 154/257 (59%), Gaps = 9/257 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L + I V+MVFDG LP+K+ TEE+R KKR+ + K E +A L
Sbjct: 68 LKKVELLKKYNITVVMVFDGAKLPSKKTTEEEREKKRNDNLQKHLEFKQQGEKDKAYQKL 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+DVT +MA +++A R R ++CIVAP+EADAQ+AYL++ Y D +ITEDSDL+ +GA
Sbjct: 128 VESIDVTPQMASKLLEALRIRNIECIVAPYEADAQLAYLSLTEYVDVIITEDSDLIAYGA 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++YKLD G +D + S + + KF CILSGCDY + + G+G+K+A
Sbjct: 188 KKVLYKLDKFGYGEEIDYNSISSCTEYNFQNWHHQKFLTFCILSGCDYLSSLSGIGIKRA 247
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y +++ A+ + KI + +++ F L FL+Q V+ PV +++V
Sbjct: 248 --YQIVATSQNYKQAIDNLQRKQKIT----VPFDYVEQFEKAYLTFLFQRVFCPVQRKMV 301
Query: 241 PLNPLESEMRDEVFSQL 257
+N ++++ ++SQ+
Sbjct: 302 SVNTFDTDL---LYSQM 315
>gi|121705316|ref|XP_001270921.1| exonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119399067|gb|EAW09495.1| exonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 664
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 160/285 (56%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG LP+K TE +R ++R + KA EL R +EA L
Sbjct: 62 LNRVRMLLFFGVTPYLVFDGDDLPSKSGTESERLQRRQASKALGLELQRKGRTAEAYQEL 121
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+ YL G D +I+EDSDLLVFGA
Sbjct: 122 QKAVDVTPNMARQLIEELKKMEVQYVVAPYEADAQLVYLEREGIIDGIISEDSDLLVFGA 181
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G C ++R + ++ L +TDA FR MCILSGCDY I MGLK A
Sbjct: 182 KRLLSKLDQHGECIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLANIPRMGLKTA 241
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++N + I + G Y ++ ++L F L FLYQ V+ P + ++V
Sbjct: 242 YRSIRK-----YKNVEKSIRMLQFDGQY-QVPADYLKKFQQAELTFLYQRVFCPKAGKLV 295
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L P E +D + +L ++ + A +A G+L P + +E+
Sbjct: 296 TLTPPE---KDIILDELPFIGGDVDPEIAVGIARGDLHPTTKQEI 337
>gi|328862806|gb|EGG11906.1| hypothetical protein MELLADRAFT_41659 [Melampsora larici-populina
98AG31]
Length = 484
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 165/286 (57%), Gaps = 18/286 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L H + +VFDG LP K TEE R K+R ++ A A LL + EA+
Sbjct: 60 MARVDLLRHHGVIPYVVFDGDALPGKRGTEEAREKRRQTNLALANSLLSEGKKEEAREAF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ D+T ++A ++I + + GV +VAP+EADAQ+ +L + G+ D ++TEDSDLLV+GA
Sbjct: 120 VKATDITPQIAHDIILSLKEAGVKYVVAPYEADAQLRFLELHGHIDGILTEDSDLLVYGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +++KLD G+C + R+ L+ +TD +FR M ILSGCDY I G+GLKKA
Sbjct: 180 KNVLFKLDPLGHCIHISRDDFGKVKDTQLSLWTDTEFRQMAILSGCDYLPSIHGLGLKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + +++A R I GS +K+ + F L FLYQ VYDP ++++V
Sbjct: 240 YQLIKT-----YKSAERAIKATRLEGS-LKVPLGYEALFRRAELTFLYQIVYDPTTRKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKEL----ELPKDQ-AFQLALGNLDPFS 281
L+PL S SQ + ++L E +DQ A +A G DPF+
Sbjct: 294 HLHPLPS-------SQPNPEDLVSCGEFWEDQVAVAVAEGRADPFT 332
>gi|358368265|dbj|GAA84882.1| exonuclease [Aspergillus kawachii IFO 4308]
Length = 688
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 162/280 (57%), Gaps = 9/280 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
MLL + +VFDG LP+K TE +R+K+R KA EL R +EA L+++VD
Sbjct: 1 MLLYFGVTPYLVFDGDELPSKAGTEVERQKRRQDSKALGLELQRKGRIAEAYQELQKAVD 60
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT MA +I+ + V +VAP+EADAQ+AYL G +I+EDSDLLVFGAK+++
Sbjct: 61 VTPLMARELIEELKKIDVQYVVAPYEADAQLAYLEQQGIIAGIISEDSDLLVFGAKRLLS 120
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +GLK A +
Sbjct: 121 KLDQHGDCIEINRADFSACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTAYRSIR 180
Query: 186 SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPL 245
+ E ALR + G+ + ++L +F L FLYQ V+ P + ++V L P
Sbjct: 181 KYK--NVERALRMLQFDGQY----HVPSDYLDNFRQAELTFLYQRVFCPKAGKLVTLTPP 234
Query: 246 ESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
E++++ E +L+ ++ D A +A G+LDP + E +
Sbjct: 235 EADVKLE---ELTFIGGDVEPDIAVGVARGDLDPTTKERL 271
>gi|134108762|ref|XP_777034.1| hypothetical protein CNBB5600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259717|gb|EAL22387.1| hypothetical protein CNBB5600 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 142/248 (57%), Gaps = 9/248 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + L H I+ +VFDG LPAK+ TE R K R + KA L R EA+
Sbjct: 60 MYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKTRLENLEKARSLEAQGRMKEAKEAY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A RA VD +VAP+EADAQ+ +L GY D +ITEDSDLLVFG
Sbjct: 120 TRCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQLCFLEREGYVDGIITEDSDLLVFGC 179
Query: 121 KK---IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
KK +I+KLD G C ++ R++L + P+ +TD FR M +LSGCDY I G+G+
Sbjct: 180 KKASRVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRMAMLSGCDYLDSIPGIGI 239
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
K A + E L+ I + G+Y+ + +L+ F L FLYQ VYDP
Sbjct: 240 KTAHRLMRRFN--SVEKLLQHIRLE---GTYL-VPPTYLSDFAQAELAFLYQRVYDPSLG 293
Query: 238 EVVPLNPL 245
+V LNPL
Sbjct: 294 RLVHLNPL 301
>gi|429852832|gb|ELA27949.1| exo1 protein [Colletotrichum gloeosporioides Nara gc5]
Length = 791
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL +K +VFDG LP+K ATE R K+RD K A ELL + S+A
Sbjct: 60 MHRVRMLLHFGVKPYLVFDGDFLPSKAATEGSRAKRRDESKKTAMELLKAGKPSQAHLEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA N+I + V +VAP+EADAQ+ YL G D +++EDSDLLVFG
Sbjct: 120 QKAIDVTPEMARNLIDELKKLDVSYVVAPYEADAQLVYLERQGLIDGILSEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L ++D FR M ILSGCDY GI MGLK A
Sbjct: 180 KRLLTKLDQYGNCIEINRRDFCACREVSLTGWSDTDFRRMAILSGCDYLEGINNMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R GK +I++ +L F L FL+Q VY P KE+V
Sbjct: 240 YRMLRKYKTP--ERLVRMCQFEGKH----RISENYLPRFFQAELTFLHQRVYCPTKKEMV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM--------------- 285
L E+ + + + + A +A+G+++P + E +
Sbjct: 294 FLTEPEA---GKGVEDMPFIGAYVEPEMATAVAVGDVNPMTKETIIPAPMPGGKSPKSDS 350
Query: 286 DQWNPDSEENLPVTSIWSKQYEKPCDRH 313
+ + S E L +S ++Q KP D +
Sbjct: 351 KRRHSQSAEALAASSNRTRQAAKPIDSY 378
>gi|340518752|gb|EGR48992.1| nuclease-like protein [Trichoderma reesei QM6a]
Length = 733
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 186/341 (54%), Gaps = 38/341 (11%)
Query: 2 KYIHMLLAHKIKVI--------MVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG 53
KYI+ +L H++K++ MVFDG LP+K ATEE R KKR+ A E L +
Sbjct: 51 KYINGVL-HRVKMLKHFGVTPYMVFDGDFLPSKAATEESRAKKREEKLKLANEYLKAGKP 109
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
S+A ++ +D+T +MA +IQ + + +VAP+EADAQ+ YL G+ +I++DS
Sbjct: 110 SQAAQEFQKCIDITPEMASALIQQLKKMDIPYVVAPYEADAQLVYLERHGFVSGIISDDS 169
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
DLLVFGAK+++ KLD GNC ++R + ++ L ++D +FR M I+SGCDY G+
Sbjct: 170 DLLVFGAKRLLTKLDQYGNCIEINRRDFCACREISLTGWSDTEFRRMAIMSGCDYLHGLP 229
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
G+GLK A + P E +R + + GK +I++ +LT F+ L FL+Q VY
Sbjct: 230 GVGLKTAYRMIRKTKSP--ERIVRLLQLDGK-----RISENYLTLFYQAELTFLHQWVYC 282
Query: 234 PVSKEVVPLNPLE-SEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS 292
P KE+V L L+ + DE+ + E E+ A ++A G+++P +
Sbjct: 283 PTKKELVHLTELDGTRTADEMPFIGAYVEPEM----ARKIASGDVNPIT----------- 327
Query: 293 EENLPVTSIWSKQYEKPCDRHSSEESVSEPPVFQKLKPVAS 333
LP+ S RHS + ++ P + KP++S
Sbjct: 328 --KLPIVMPISPSKR----RHSQSAAATDAPTRPESKPISS 362
>gi|396482491|ref|XP_003841474.1| similar to exonuclease [Leptosphaeria maculans JN3]
gi|312218049|emb|CBX97995.1| similar to exonuclease [Leptosphaeria maculans JN3]
Length = 725
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 158/279 (56%), Gaps = 9/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML+ + +VFDG +LP+K +TE+DR++KR K ELL + + ++A L
Sbjct: 60 MNRVRMLIHFGVTPYLVFDGDNLPSKASTEKDRKEKRKEGKRLGLELLKVGKVAQAHLEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA VI+ + + IVAP+EAD+QMAYL G + V++EDSDLLVFG
Sbjct: 120 QKSVDVTPEMARMVIEELKTNNIQYIVAPYEADSQMAYLERKGIINGVLSEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G+C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 180 KCLLTKLDKYGDCIEINRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + ++ + +K+ FLT F FLY V+ P++ ++V
Sbjct: 240 HRMLRK------HKTVDRLVKAAQFDGKLKVPAGFLTDFEQAEKTFLYSWVFCPIANQLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L PLE ++ + + E+P A ++A GNL P
Sbjct: 294 NLTPLEDGIK---AADMPYIGEEVPAHIAVEVAKGNLYP 329
>gi|299742153|ref|XP_001832288.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
gi|298405054|gb|EAU89661.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 165/302 (54%), Gaps = 28/302 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +HML KI+ +VFDG LPAK+ TE +R+KKR+ + AK L+ R ++A+
Sbjct: 60 MDRVHMLRHFKIEPYIVFDGGPLPAKKGTESERKKKREENLAKGKALVAQGRHTQARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA +I+ RA GV +VAP+EADAQ+AYL G D ++TEDSDLLVFG
Sbjct: 120 NKCIDVTPQMAYQLIKKLRAEGVQYLVAPYEADAQLAYLERIGLVDGILTEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREK------LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
K + +K D S N + E+ +P + LA +TD +FR M ILSGCDY I G
Sbjct: 180 KSVFFKFD-STNYTVVSIERKDFASVVPPRSDIHLAGWTDVQFRSMAILSGCDYLPSIPG 238
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYV------KITKEFLTSFHNTNLMFLY 228
+GLK A N LRK + ++ K+ +L +H F +
Sbjct: 239 IGLKTAC------------NLLRKYKTAEAVVKHLIFEGKKKVPPGYLEQYHFAEKCFQH 286
Query: 229 QPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQW 288
Q VY P+ +++VPL P+ ++ E +L A +LA+G++DP +L M+
Sbjct: 287 QKVYCPLQEKLVPLYPVPADWTQEYEDYCG---GDLDPALAKKLAMGDVDPHTLLPMNDI 343
Query: 289 NP 290
NP
Sbjct: 344 NP 345
>gi|240274250|gb|EER37767.1| exonuclease [Ajellomyces capsulatus H143]
Length = 829
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL I +VFDG +LP+K TE R ++R+ K EL R +EA L
Sbjct: 60 MNRVRMLLYFGITPYLVFDGDNLPSKAGTESARAQRREESKKLGLELYRSGRVAEAHQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 120 QKAVDVTPYMARLMIEELKKLKIQYIVAPYEADAQLVYLEKHGIINGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 180 KRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKI-------GSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+ N +RK KI G+ +++ ++L F L FLYQ V+
Sbjct: 240 -----------YRN-VRKYKTIEKILKMLQFEGNGIRVPPQYLEDFKKAELTFLYQLVFC 287
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
P+++++V L+PL + + + ++ D A +A G+LDP + E
Sbjct: 288 PLNRKLVTLSPLPAGAK---LDSMPFVGTDIEPDMAIGVACGDLDPMTKE 334
>gi|342873165|gb|EGU75385.1| hypothetical protein FOXB_14090 [Fusarium oxysporum Fo5176]
Length = 743
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 182/336 (54%), Gaps = 33/336 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + MVFDG LP+K ATEE R KR+ K A ELL + ++A
Sbjct: 57 MNRVRMLRHFGVTPYMVFDGDFLPSKAATEESRDTKRNEKKKAAMELLRAGKPAQATQEF 116
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ +D+T +MA +IQ + + +VAP+EADAQ+ YL G + +I++DSDLLVFGA
Sbjct: 117 QKCIDITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGA 176
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++ KLD GNC ++R+ + ++ L ++D +FR M I SGCDY G+ G+GLK A
Sbjct: 177 KKLLTKLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLRGLPGIGLKTA 236
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + + G+ K+++ +LT F+ L FL+Q V+ P +E+V
Sbjct: 237 YRMLRKTKAP--ERIVRMVQMQGR-----KVSENYLTQFYQAELTFLHQWVFCPTKRELV 289
Query: 241 PLNPLESEMRDEVFSQL-SLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT 299
L L+ E E + + E E+ A +A G+++P + + L VT
Sbjct: 290 HLTDLDGERTAEEMPFIGAFVEPEI----ARSIARGDMNPIT------------KTLIVT 333
Query: 300 SIWSKQYEKPCDRHS--SEESVSEPPVFQKLKPVAS 333
S + RHS + ++ +PP +KP++S
Sbjct: 334 STTPSKR-----RHSQLAHGAIDQPP--PTMKPISS 362
>gi|325091676|gb|EGC44986.1| exonuclease [Ajellomyces capsulatus H88]
Length = 830
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL I +VFDG +LP+K TE R ++R+ K EL R +EA L
Sbjct: 60 MNRVRMLLYFGITPYLVFDGDNLPSKAGTESARAQRREESKKLGLELYRSGRVAEAHQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 120 QKAVDVTPYMARLMIEELKKLKIQYIVAPYEADAQLVYLEKHGIINGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 180 KRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKI-------GSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+ N +RK KI G+ +++ ++L F L FLYQ V+
Sbjct: 240 -----------YRN-VRKYKTIEKILKMLQFEGNGIRVPPQYLEDFKKAELTFLYQLVFC 287
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
P+++++V L+PL + + + ++ D A +A G+LDP + E
Sbjct: 288 PLNRKLVTLSPLPAGAK---LDSMPFVGTDIEPDMAIGVACGDLDPMTKE 334
>gi|225554873|gb|EEH03167.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 773
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + +VFDG +LP+K TE R ++R+ K EL R +EA L
Sbjct: 1 MNRVRMLLYFGVTPYLVFDGDNLPSKAGTESARAQRREESKKIGLELYRSGRVAEAHQEL 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 61 QKAVDVTPYMARLMIEELKKMKIQYIVAPYEADAQLVYLEKHGIINGIISEDSDMLVFGA 120
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 121 KRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 180
Query: 181 KDYVFSIMDPDFENALRKINVYGKI-------GSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+ N +RK KI G+ +++ ++L +F L FLYQ V+
Sbjct: 181 -----------YRN-VRKYKTIEKILKMLQFEGNGIRVPPQYLENFKKAELTFLYQLVFC 228
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
P ++++V L+PL + + + ++ D A +A G+LDP + E
Sbjct: 229 PRNRKLVTLSPLPTGAK---LDSMPFVGTDIEPDMAIGVACGDLDPMTKE 275
>gi|189200895|ref|XP_001936784.1| exodeoxyribonuclease 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983883|gb|EDU49371.1| exodeoxyribonuclease 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 724
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 160/279 (57%), Gaps = 9/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +HML+ I +VFDG +LP+K TE+DRR++R K ELL + + ++AQ L
Sbjct: 60 MNRVHMLIHFGITPYLVFDGDNLPSKAGTEKDRRERRKEGKRLGLELLKVGKAAQAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA VI+ + + +VAP+EAD+Q+AYL G + V++EDSDLLVFG
Sbjct: 120 QKSVDVTPEMARMVIEELKHHNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +I KLD G+C ++R + ++ ++DA FR MCILSGCDY GI G+GLK A
Sbjct: 180 KCLITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCILSGCDYLPGIGGLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D ++ + GK+ K+ F+ F FLYQ VY P+ K++V
Sbjct: 240 HRMLRKHKTVD--RLVKAVQFDGKL----KVPAGFMADFDQAEKTFLYQWVYCPIDKKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L P+ + + + E+P D A +A G+L P
Sbjct: 294 NLTPVNDGIS---LADMPYLGEEVPSDLATGVARGDLYP 329
>gi|408397964|gb|EKJ77101.1| hypothetical protein FPSE_02745 [Fusarium pseudograminearum CS3096]
Length = 747
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 159/281 (56%), Gaps = 10/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML I MVFDG LP+K ATE+ R KKRD K A ELL + ++A
Sbjct: 60 MTRVRMLRHFGITPYMVFDGDFLPSKAATEDSRAKKRDEKKKAAMELLRAGKPAQATQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ +D+T +MA +IQ + + +VAP+EADAQ+ YL G + +I++DSDLLVFGA
Sbjct: 120 QKCIDITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++ KLD GNC ++R+ + ++ L ++D +FR M I SGCDY G+ G+GLK A
Sbjct: 180 KKLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + GK ++++ +LT F+ L FL+Q V+ P +E+V
Sbjct: 240 YRMLRKTKVP--ERIVRMVQFQGK-----RVSENYLTQFYQAELTFLHQWVFCPTKRELV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L L+ E ++ + + A +A G+++P +
Sbjct: 293 HLTDLDGTRTAE---EMPFIGAFVEPETARAIARGDMNPIT 330
>gi|46125331|ref|XP_387219.1| hypothetical protein FG07043.1 [Gibberella zeae PH-1]
Length = 747
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 159/281 (56%), Gaps = 10/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML I MVFDG LP+K ATE+ R KKRD K A ELL + ++A
Sbjct: 60 MTRVRMLRHFGITPYMVFDGDFLPSKAATEDSRAKKRDEKKKAAMELLRAGKPAQATQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ +D+T +MA +IQ + + +VAP+EADAQ+ YL G + +I++DSDLLVFGA
Sbjct: 120 QKCIDITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++ KLD GNC ++R+ + ++ L ++D +FR M I SGCDY G+ G+GLK A
Sbjct: 180 KKLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + GK ++++ +LT F+ L FL+Q V+ P +E+V
Sbjct: 240 YRMLRKTKVP--ERIVRMVQFQGK-----RVSENYLTQFYQAELTFLHQWVFCPTKRELV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L L+ E ++ + + A +A G+++P +
Sbjct: 293 HLTDLDGTRTAE---EMPFIGAFVEPEAARAIARGDMNPIT 330
>gi|402222231|gb|EJU02298.1| PIN domain-like protein, partial [Dacryopinax sp. DJM-731 SS1]
Length = 342
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 163/292 (55%), Gaps = 11/292 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I +L H I+ +VFDG LPAK+ TEE+R K R A+A ELL + SEA+
Sbjct: 60 MGRIRLLRYHNIEPFVVFDGGPLPAKKGTEEERSKSRAEALAQARELLAKGKASEAREFY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++D+T + A VI+A ++ V +VAP+EADAQMAYL AG+ +ITEDSDLLVFG
Sbjct: 120 VKALDITPEHAFQVIKALKSEDVQYVVAPYEADAQMAYLENAGHVHGIITEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +++KLD G C + R +L + + D +FR+M +LSGCDY I+GMGLK A
Sbjct: 180 KDVLFKLDTDGQCKRVRRSRLTKCKEASFVGWGDKEFRWMAMLSGCDYLPSIQGMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D L+ + GK+ K+ K + F L F++Q VY P+++++V
Sbjct: 240 HRLLRQWKTVD--RVLQHVRREGKM----KVPKRYQQDFEMAELAFVFQRVYCPLAQKLV 293
Query: 241 PL--NPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
L P E D ++ + +L A ++A G L P S + + +P
Sbjct: 294 HLRERPWEVAWND---AKEAYVGADLDPGIAQRIASGELCPISHQPIKDISP 342
>gi|115384774|ref|XP_001208934.1| hypothetical protein ATEG_01569 [Aspergillus terreus NIH2624]
gi|114196626|gb|EAU38326.1| hypothetical protein ATEG_01569 [Aspergillus terreus NIH2624]
Length = 748
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 158/285 (55%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + ML + +VFDG +LP+K TE +R ++R KA EL R +EA L
Sbjct: 60 LNRVRMLQYFGVTPYLVFDGDNLPSKSGTEAERHQRRQQSKALGLELQRKGRITEAYQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+ YL G +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPSMARQLIEELKKMDVQYVVAPYEADAQLVYLERQGIIHGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++++ KLD G+C ++R + + L +TDA FR MCILSGCDY I +GLK A
Sbjct: 180 RRLLSKLDQHGDCIEINRADFAACRDVSLIGWTDADFRRMCILSGCDYLPNIPRLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + ++L +F L FLYQ V+ P +V
Sbjct: 240 YRSIRKYK--NVERALRMLQFEGQY----NVPADYLENFKQAELTFLYQRVFCPTGNRLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L P +S+++ E +L ++ + A +A G+LDP + E +
Sbjct: 294 TLTPPDSDVQLE---ELPFIGGDVDPETAAGVARGDLDPTTKEPL 335
>gi|391339522|ref|XP_003744097.1| PREDICTED: exonuclease 1-like [Metaseiulus occidentalis]
Length = 516
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 153/245 (62%), Gaps = 2/245 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK I+ L A+ ++ ++VFDG+ LP+K T + R + + + KA L + EA+ +
Sbjct: 60 MKMINALQANGVRPVVVFDGKSLPSKADTNKKRAESKKENLTKAKMLFAEGKTLEAKQLM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ V++T ++A +I R +D +VAP+EADAQ+ +LN+ GY D +++EDSDLL+FG
Sbjct: 120 KRCVNITPELAHQLICELRKHRIDYVVAPYEADAQLTFLNLNGYVDLIVSEDSDLLLFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
++++YK+D++G +++ K+P L FT KFR+ CILSGCDY + G+GLKK
Sbjct: 180 ERVLYKMDVNGYGTLVEKSKIPQCLGSGGTTHFTHDKFRWACILSGCDYLENLPGIGLKK 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
++ + D + LRK+ Y K+ S V +T +++ F + FLYQ V+ P +K++
Sbjct: 240 TLKFLKPTSNTDPYSLLRKMPNYLKMPS-VTVTDDYIDRFVKADNTFLYQLVFCPETKKL 298
Query: 240 VPLNP 244
PLNP
Sbjct: 299 RPLNP 303
>gi|346976689|gb|EGY20141.1| exodeoxyribonuclease [Verticillium dahliae VdLs.17]
Length = 805
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 140/240 (58%), Gaps = 6/240 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + +VFDG LP+K TE R K+RD K ELL + S+A +
Sbjct: 60 MHRVRMLRHFGVTPYLVFDGDFLPSKAMTEGSRAKRRDDSKKLGLELLKAGKNSQASAEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++S+DVT +MA N+I + V+ +VAP+EAD+Q+ YL G D +++EDSDLLVFG
Sbjct: 120 QKSIDVTPEMARNLIDELKKIHVEYVVAPYEADSQLVYLERQGIIDGILSEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L +TDA+FR M ILSGCDY G+ MGLK A
Sbjct: 180 KRLLTKLDQYGNCIEINRRDFAACREISLTGWTDAEFRRMAILSGCDYLAGVSNMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
V P E +R + K ++++++L +F L FLYQ VY P KE+V
Sbjct: 240 YRMVRQHKTP--ERLVRMMQFEAKH----RVSEDYLANFTKAELTFLYQRVYCPKKKELV 293
>gi|261195837|ref|XP_002624322.1| exonuclease [Ajellomyces dermatitidis SLH14081]
gi|239587455|gb|EEQ70098.1| exonuclease [Ajellomyces dermatitidis SLH14081]
Length = 855
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 158/293 (53%), Gaps = 22/293 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + +VFDG HLP+K TE R ++R+ K EL R +EA L
Sbjct: 58 MNRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRREESKKLGLELYRSGRVTEAHQEL 117
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 118 QKAVDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGMINGIISEDSDLLVFGA 177
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 178 KRLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 237
Query: 181 KDYVFSIMDPDFENALRKINVYGKI-------GSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+ N +RK KI G+ ++ ++L F L FL+Q V+
Sbjct: 238 -----------YRN-VRKYKTVEKILKMLQFEGNGARVPPQYLEDFKRAELTFLHQLVFC 285
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
P+++++V L+PL + + D A +A G+LDP + E ++
Sbjct: 286 PLARKLVTLSPLPEHTS---LDSMPFVGAYIEPDTAIGVACGDLDPITKEPIN 335
>gi|154281289|ref|XP_001541457.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411636|gb|EDN07024.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 832
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 157/290 (54%), Gaps = 22/290 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + +VFDG +LP+K TE R ++R+ + EL R +EA L
Sbjct: 60 MNRVRMLLYFGVTPYLVFDGDNLPSKAGTESARAQRREESRKLGLELYRSGRVAEAHQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + +VAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 120 QKAVDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGIINGIISEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 180 KRLLSKLDKHGECVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKI-------GSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+ N +RK KI G+ +++ ++L F L FLYQ V+
Sbjct: 240 -----------YRN-VRKYKTIEKILKMLQFEGNGIRVPPQYLEDFKKAELTFLYQLVFC 287
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
P+++ +V L+PL + + + + D A +A G+LDP + E
Sbjct: 288 PLNRNLVTLSPLPAGAK---LDSMPFVGTNIEPDMAIGVACGDLDPMTKE 334
>gi|327357901|gb|EGE86758.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 857
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 158/293 (53%), Gaps = 22/293 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + +VFDG HLP+K TE R ++R+ K EL R +EA L
Sbjct: 60 MNRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRREESKKLGLELYRSGRVTEAHQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGMINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 180 KRLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKI-------GSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+ N +RK KI G+ ++ ++L F L FL+Q V+
Sbjct: 240 -----------YRN-VRKYKTVEKILKMLQFEGNGARVPPQYLEDFKRAELTFLHQLVFC 287
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
P+++++V L+PL + + D A +A G+LDP + E ++
Sbjct: 288 PLARKLVTLSPLPEHTS---LDSMPFVGAYIEPDTAIGVACGDLDPITKEPIN 337
>gi|388854880|emb|CCF51561.1| related to EXO1-exonuclease which interacts with Msh2p [Ustilago
hordei]
Length = 813
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 158/285 (55%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML IK +VFDG LPAK TE+DR KR + A+A +L + +A+
Sbjct: 60 LSRIGMLQHFGIKPYLVFDGDKLPAKTHTEDDRESKRSENLARAQQLEAEGKLQQARDLY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VD+T +MA +I+ + + + +VAP+EADAQ+AYL G D V+TEDSDLLVFG
Sbjct: 120 AKCVDITPEMAYQLIKVLKEQAIPYLVAPYEADAQLAYLEKCGAIDAVLTEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+++KLD +GN + +E+ + ++ + +T +FR M ILSGCDY I GMGLK A
Sbjct: 180 NTVLFKLDQAGNAVEIKQERFWTNRQITFSGWTAVEFRQMAILSGCDYLPSIVGMGLKNA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D L+ I + GK+ +I + + F L F++Q V+DP S +VV
Sbjct: 240 HRLLRRHKTVD--KVLQVIRLEGKM----RIPPTYASEFRKAELTFVHQRVFDPTSSKVV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L PL S D++ L + + A +A G +DP + E +
Sbjct: 294 TLTPLPSGTHDDM---LPFIGAHIEDEMARAIADGIIDPITRERI 335
>gi|239614407|gb|EEQ91394.1| exonuclease [Ajellomyces dermatitidis ER-3]
Length = 857
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 158/293 (53%), Gaps = 22/293 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + +VFDG HLP+K TE R ++R+ K EL R +EA L
Sbjct: 60 MNRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRREESKKLGLELYRSGRVTEAHQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPYMARLMIEELKKLKIQYVVAPYEADAQLVYLEKQGMINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 180 KRLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKI-------GSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+ N +RK KI G+ ++ ++L F L FL+Q V+
Sbjct: 240 -----------YRN-VRKYKTVEKILKMLQFEGNGARVPPQYLEDFKRAELTFLHQLVFC 287
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
P+++++V L+PL + + D A +A G+LDP + E ++
Sbjct: 288 PLARKLVTLSPLPEHTS---LDSMPFVGAYIEPDTAIGVACGDLDPITKEPIN 337
>gi|440633917|gb|ELR03836.1| hypothetical protein GMDG_01365 [Geomyces destructans 20631-21]
Length = 775
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 161/287 (56%), Gaps = 17/287 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + ++FDG +LP+K ATE DR K+R + K ELL + ++A L
Sbjct: 60 MHRVRMLQHFGVIPFLIFDGDYLPSKAATEADRNKRRAASKTLGLELLNAGKVAQANLEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT +MA +I GV IVAP+EADAQM YL G D +++EDSDLLVFGA
Sbjct: 120 QKAVDVTPEMARQLIDELNMAGVQYIVAPYEADAQMVYLEKKGVIDGILSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD GNC +++ + + LA +++ +FR M ILSGCDY + I MGLK A
Sbjct: 180 KCLLTKLDQYGNCIEINQADFSACRDINLAGWSEKEFRQMAILSGCDYLSSITNMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y + E +R + GK + K++L +F+ L FL+Q V+ P++ +VV
Sbjct: 240 --YRMIRKHKNVEKVIRMLQFDGK----YHVPKDYLDNFYQAELTFLHQRVFCPIANKVV 293
Query: 241 ----PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
P P++ E +L+ + + A ++A G L+P + E
Sbjct: 294 FHTEPEQPIDEE-------KLTFIGAHVEAEIAKKVATGELNPMTKE 333
>gi|453080704|gb|EMF08754.1| PIN domain-like protein [Mycosphaerella populorum SO2202]
Length = 739
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 159/279 (56%), Gaps = 9/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML+ +K +VFDG +LP+K TE++R +R K ++L + R S+AQ L
Sbjct: 60 MHRVRMLIHFGVKPYLVFDGDYLPSKAHTEKERAARRKESKRVGLDMLRMGRPSQAQLEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA VI+ R V+ +VAP+EAD+Q+AYL G + V++EDSDLLVFG
Sbjct: 120 QKAVDVTPVMAREVIEELRKLDVEYVVAPYEADSQLAYLEKEGIINGVLSEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ KLD G C ++R S + L ++D +FR M +LSGCDY GI +GLK A
Sbjct: 180 NCLLTKLDQFGECVMVNRADFTSVRDISLVGWSDKEFRMMAMLSGCDYLPGIDKIGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y E +R + GK+ K+ K++L +F+ F++Q V+ P ++ +
Sbjct: 240 --YRLVRKHKTIEKIVRTVQFDGKM----KVPKDYLDAFYRAERTFMHQWVFCPEAQCLT 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
LNPL + + E+ + + D A+ +A+G+L P
Sbjct: 294 HLNPLPAGLNVELMPYIG---HHVEADHAYGVAIGDLHP 329
>gi|328877038|gb|EGG25401.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
fasciculatum]
Length = 994
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 171/311 (54%), Gaps = 24/311 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I M+ +HK+ ++VFDG LP K TE+DRR KR +K KA L+ +EA
Sbjct: 60 LNLISMMKSHKVIPVIVFDGGPLPNKRGTEDDRRSKRQQYKEKANAYLLEGNRAEANKCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA N+I+ R G++ +VAP+EADAQ+AYL + D ++TEDSDL+ +G
Sbjct: 120 QKAVDVTTLMAFNLIKELRRLGIEYVVAPYEADAQLAYLAVTNQVDAILTEDSDLIAYGT 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+++K++ G C + E + S + + F R MCIL+GCDY + GMG+K
Sbjct: 180 PTVLFKMNKEGYCEEIKSENICSCKSNGLDFGNFNLTMLRQMCILAGCDYLPSLHGMGIK 239
Query: 179 KA----KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+ K+Y + KI Y K ++T+E++ SF+ +L F + VYDP
Sbjct: 240 TSYKLFKEY----------KEIEKIFKYLK--GTKRLTEEYVGSFYKADLTFRHARVYDP 287
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEE 294
VSK +V +PL+ E V + + + + ++A G + P + + + P+ ++
Sbjct: 288 VSKTMVHFSPLDEE---NVGTNMDFLGECIENEIVEKIATGVICPVTRQVFE---PNQQK 341
Query: 295 NLPVTSIWSKQ 305
N+P +S + Q
Sbjct: 342 NVPYSSAFKPQ 352
>gi|213404598|ref|XP_002173071.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
gi|212001118|gb|EEB06778.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
Length = 566
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 158/290 (54%), Gaps = 9/290 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I ML + +K +VFDG LP+K TEE RR +R +L + S+A HL
Sbjct: 60 MHRISMLTYYGVKPFVVFDGGPLPSKLGTEEKRRARRKEALELGKKLWNEGKRSQAMMHL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+DVT +MA R + +VAP+EAD Q+ YL G+ D +ITEDSD+L+FGA
Sbjct: 120 SRSIDVTPEMANRFAMTLRQNNIPFVVAPYEADPQLVYLEKTGFIDGIITEDSDMLIFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +++KLD GNC + RE +P M L F D RY+ I SGCDY GI G+GLKKA
Sbjct: 180 RTVLFKLDNFGNCDVVRREDIPRLPNMSLQGFNDHMLRYLAIFSGCDYTDGIGGIGLKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ PD A+R + + + + +F +F + F +Q VY P + +V
Sbjct: 240 IRFIQRFPKPD--AAIRAM----RAERSLNVPIDFEHTFTLADKAFQHQRVYCPQQQRLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
LN + + DE+ + + L + ++ A Q+A+G ++P + E+ P
Sbjct: 294 HLNDVVGTL-DEI--EEAFVGLPIDEEIARQIAIGEMNPITKEKFVSCEP 340
>gi|67525155|ref|XP_660639.1| hypothetical protein AN3035.2 [Aspergillus nidulans FGSC A4]
gi|40744430|gb|EAA63606.1| hypothetical protein AN3035.2 [Aspergillus nidulans FGSC A4]
gi|259486018|tpe|CBF83526.1| TPA: 5'-3' exonuclease and flap-endonuclease (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 761
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 154/281 (54%), Gaps = 9/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL +K +VFDG +LP+K TE DR+++R K EL R +EA L
Sbjct: 60 LSRVRMLLFFGVKPYLVFDGDNLPSKSGTELDRQQRRHESKTLGMELYRKGRTAEAYQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + + +VAP+EADAQ+ YL G+ D +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPLMARQLIEELKKLDIQYVVAPYEADAQLVYLEKHGFIDGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G ++R + ++ +TDA FR MCI+SGCDY I +GLK A
Sbjct: 180 KRLLSKLDQHGELIEINRADFTACREVSFVGWTDADFRRMCIMSGCDYLPNIARVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ E ALR + G + ++L SF L FLYQ V+ P S ++V
Sbjct: 240 YRSIRKYK--SVEKALRMLQFEGPY----HVPADYLQSFMQAELTFLYQRVFCPKSGKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
PL + + +L ++ + A +A G+LDP S
Sbjct: 294 PLTSPDDGVN---LDELPFIGADMDPETAVGVANGDLDPTS 331
>gi|358385942|gb|EHK23538.1| hypothetical protein TRIVIDRAFT_37141, partial [Trichoderma virens
Gv29-8]
Length = 731
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 158/278 (56%), Gaps = 10/278 (3%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ ML + MVFDG LP+K ATE R KKR+ A E L + S+A ++
Sbjct: 59 VRMLKHFGVTPYMVFDGDFLPSKAATEASRAKKREDKLKLANEYLKAGKPSQAAQEFQKC 118
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+D+T +MA +IQ + + +VAP+EADAQ+ YL G+ D +I++DSDLLVFGAK++
Sbjct: 119 IDITPEMASALIQQLKKMDIPYVVAPYEADAQLVYLERHGFVDGIISDDSDLLVFGAKRL 178
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD GNC ++R + ++ L ++DA+FR M I+SGCDY G+ G+GLK A
Sbjct: 179 LTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAIMSGCDYLNGLPGVGLKTAYRM 238
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ P E +R + GK +I++ +LT F+ L FL+Q V+ P KE+V L
Sbjct: 239 LRKTKSP--ERIVRLLQFEGK-----RISENYLTLFYQAELTFLHQWVFCPTKKELVHLT 291
Query: 244 PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L+ E ++ + + A ++A G+++P +
Sbjct: 292 ELDGTHTAE---EMPFIGSHVEPEMARKIASGDVNPIT 326
>gi|319411532|emb|CBQ73576.1| related to EXO1-exonuclease which interacts with Msh2p [Sporisorium
reilianum SRZ2]
Length = 758
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML +K +VFDG LPAK TE+DR ++R + +A EL +A+
Sbjct: 60 LSRIRMLQHFGVKPYLVFDGDKLPAKSGTEDDREQRRSDNLRRANELEQQGNMQQARDVY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VD+T +MA +I+ + + +VAP+EADAQ+AYL G D +ITEDSDLLVFG
Sbjct: 120 AKCVDITPEMAFQLIKVLKEERIPYVVAPYEADAQLAYLEAEGIVDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +++KLD +GN M +++ + ++ L+ +T +FR M ILSGCDY I GMGLK A
Sbjct: 180 KTVLFKLDQAGNAVEMLQQRFWTNRQIALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D L+ + + GK+ ++ + F L F++Q V+DP S+++V
Sbjct: 240 HRLLRRYKTVD--KVLQAVRLEGKM----RVPPTYAREFRKAELTFVHQRVFDPRSQKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L PL DE+ L + D A +A G +DP +
Sbjct: 294 TLTPLPDGTHDEM---LPFIGAAMEDDVAKGVADGTIDPIA 331
>gi|402080689|gb|EJT75834.1| exonuclease 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 813
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 167/297 (56%), Gaps = 28/297 (9%)
Query: 2 KYIHMLLAHKIKVI--------MVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG 53
+Y+ + H+++++ +VFDG LP+K TE R K+R+ K ELL +
Sbjct: 54 RYVDFAM-HRVRMVKHFGAVPYLVFDGDFLPSKAMTESSRAKRREDSKKAGMELLKAGKP 112
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
++A ++++DVT +MA N+I+ + + +VAP+EADAQM YL GY +I+EDS
Sbjct: 113 AQAYQEFQKAIDVTPEMARNLIEELKKADLPYVVAPYEADAQMVYLERHGYVSGIISEDS 172
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
DLLVFGAK+++ KLD G C ++R S ++ L +TDA+FR M I SGCDY G+
Sbjct: 173 DLLVFGAKRLLTKLDQYGQCIEINRRDFCSVREISLTGWTDAEFRQMAIFSGCDYLDGLS 232
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
GMGLK A + P E ++ + GK ++++ +L SF + FL+Q VY
Sbjct: 233 GMGLKTAYRMIRKHKTP--EKIIKVMQFEGK----RRVSENYLASFKQAEITFLHQRVYC 286
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKEL-----ELPKDQAFQLALGNLDPFSLEEM 285
P K++V L E S L ++E+ ++ + A +A+G+++P + E +
Sbjct: 287 PEKKQLVLLT--------EPTSGLDVEEMPFIGGKVDPEMARAIAVGDVNPITKERI 335
>gi|380483134|emb|CCF40805.1| hypothetical protein CH063_02433 [Colletotrichum higginsianum]
Length = 745
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 159/284 (55%), Gaps = 11/284 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + +VFDG LP+K ATE R K+R+ K A ELL + S+A
Sbjct: 1 MHRVRMLKHFGVTPYLVFDGDFLPSKAATEGSRAKRREESKKSAIELLKAGKPSQAALEF 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA N+I + V +VAP+EAD+Q+ YL G +++EDSDLLVFG
Sbjct: 61 QKAIDVTPEMARNLIDELKKIQVPYVVAPYEADSQLVYLERQGLIGGILSEDSDLLVFGC 120
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L +TDA FR+M ILSGCDY GI MGLK A
Sbjct: 121 KRLLTKLDQYGNCIEINRRDFCAVREVSLTGWTDADFRHMAILSGCDYLEGISNMGLKTA 180
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R I GK ++++ ++ F L FL+Q VY P K++V
Sbjct: 181 YRMIRKYKTP--ERLVRMIQFEGK----HRVSENYMVRFAQAELTFLHQRVYCPKRKQLV 234
Query: 241 PLN-PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
L P E + +++ E EL A +A+G+++P + E
Sbjct: 235 CLTEPEEGKGVEDMPFIGGYVEPEL----ATAIAVGDVNPITKE 274
>gi|378732295|gb|EHY58754.1| exonuclease 1 [Exophiala dermatitidis NIH/UT8656]
Length = 774
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 156/281 (55%), Gaps = 9/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG ++P+K T RRKKR+ KA EL + S+A L
Sbjct: 60 LSRVRMLLDFGVTPYLVFDGDNIPSKAGTNASRRKKREEAKALGLELHKAGKTSQAHQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EADAQ+ YL G D +++EDSDLLVFGA
Sbjct: 120 QKAVDVTPHMARQLIEELKKLNVQFVVAPYEADAQLVYLEQKGIIDGILSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KL+ G ++R ++ LA +TD+ F M ILSGCDY I MGLK A
Sbjct: 180 KRLLTKLNQYGELVEVERANFALCKEISLAGWTDSMFMRMAILSGCDYLPNIGKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
YV D E LR + + GK+ + +++ F L FL+ V+ P+++++V
Sbjct: 240 HSYVRKYK--DVEKILRMVQLEGKM----VVPDKYMERFQQAELTFLHHRVFCPIAQKMV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
LN L + + S + + D + +A G+LDPFS
Sbjct: 294 HLNDLPPGLLE---SNMPYLGPYVDPDTSVGVACGDLDPFS 331
>gi|340374507|ref|XP_003385779.1| PREDICTED: exonuclease 1-like [Amphimedon queenslandica]
Length = 650
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 171/316 (54%), Gaps = 22/316 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK +++L + I I+VFDG +LP K TE++R+++RDS++ + LL + +EA+
Sbjct: 64 MKRVNLLRQYDINPILVFDGANLPMKHDTEKERKERRDSYRKQGKALLKEGKEAEARECF 123
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ V+++ ++A I V+ IVAP+EADAQ+AYL G AD+VITEDSDLL FG
Sbjct: 124 QRCVEISPEIASAFINLLYKEKVEVIVAPYEADAQLAYLVKEGLADFVITEDSDLLAFGV 183
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG-LKK 179
++ +K++ +G+ M+ + L FT FR++CIL GCDY + G+G +
Sbjct: 184 SQVFFKMNDTGHGKLMELRDIAKG-NPSLKGFTPDSFRHLCILCGCDYLPSVHGIGPVTA 242
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
AK DP K+ Y K GS K+ + F + FLYQ V+DP S+
Sbjct: 243 AKLMKKCNKDP------YKVIRYLKSGSKHKVPPGYEEHFRQADQAFLYQLVFDPRSQSQ 296
Query: 240 VPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT 299
V LN ++ ++ + P Q LA GN++P +LEEMDQ +P ++ T
Sbjct: 297 VRLNTPPPDVEKLEYAGI----FNSPSKQV-GLARGNINPLTLEEMDQHSPKCKKGAAFT 351
Query: 300 SIWSKQYEKPCDRHSS 315
S+ RHSS
Sbjct: 352 SLQ---------RHSS 358
>gi|238484551|ref|XP_002373514.1| exonuclease, putative [Aspergillus flavus NRRL3357]
gi|220701564|gb|EED57902.1| exonuclease, putative [Aspergillus flavus NRRL3357]
Length = 746
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 156/285 (54%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + ++FDG +LP+K TE DR ++R K EL R +EA
Sbjct: 60 LNRVRMLLYFGVTPYLIFDGDNLPSKAGTESDRHQRRQESKTLGLELQRKGRTAEAYQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I + V +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPLMARQLIDELKKMNVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +GLK A
Sbjct: 180 KRLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + +L +F L FLYQ V+ P + ++V
Sbjct: 240 YRCIRKYR--NVEKALRMLQFEGQY----HVPTNYLENFKQAELTFLYQRVFCPQAGKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L E ++ E +L ++ + A +A G+LDP + E +
Sbjct: 294 TLTAPEDDVNLE---ELPYIGADVDPELAVGVARGDLDPTTKEPL 335
>gi|347827667|emb|CCD43364.1| similar to exonuclease [Botryotinia fuckeliana]
Length = 768
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 137/240 (57%), Gaps = 6/240 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + ++FDG +LP+K ATE+DR K+R K ELL + S+A
Sbjct: 60 MHRVRMLLHFGVTPYLIFDGDYLPSKAATEKDREKRRKDSKRLGQELLNAGKTSQAYLEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT +MA +VI + GV +VAP+EADAQM YL G D +++EDSDLLVFGA
Sbjct: 120 QKAVDVTPEMARHVIDELKEMGVQYVVAPYEADAQMVYLERKGVIDGILSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD GNC +++ + + L ++DA+FR M ILSGCDY + MGLK A
Sbjct: 180 KCLLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAILSGCDYLPSMSNMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y E LR I GK + K +L SF+ FL+Q V+ P S +V
Sbjct: 240 --YRLIRKHKTIEKVLRMIQFDGKF----HVPKNYLESFYQAEFTFLHQRVFCPQSLTLV 293
>gi|358394562|gb|EHK43955.1| hypothetical protein TRIATDRAFT_319288 [Trichoderma atroviride IMI
206040]
Length = 797
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 160/279 (57%), Gaps = 12/279 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ ML + MVFDG +LP+K ATEE R KKR+ A E L + S+A ++
Sbjct: 63 VRMLKHFGVTPYMVFDGDYLPSKAATEESRAKKREEKLKIANEYLKAGKSSQAVQEFQKC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+D+T +MA +IQ + + +VAP+EADAQ+ YL G ++++DSDLLVFGAK++
Sbjct: 123 IDITPEMASALIQELKKMDIPYVVAPYEADAQLVYLERMGLVGGILSDDSDLLVFGAKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD GNC ++R + ++ L ++DA+FR M I+SGCDY G+ G+GLK A
Sbjct: 183 LTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAIMSGCDYLNGLPGVGLKTAYRL 242
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ P E +R + GK +I++ +LT F+ L FL+Q V+ P KE+V L
Sbjct: 243 LRKSKSP--ERIVRMLQFDGK-----RISENYLTLFYQAELTFLHQWVFCPAKKELVHLT 295
Query: 244 PLESEMRDEVFSQL-SLKELELPKDQAFQLALGNLDPFS 281
L++ E + S E E+ A ++A G+++P +
Sbjct: 296 ELDANRTAEEMPFIGSYVEPEM----ARKIASGDVNPIT 330
>gi|154294321|ref|XP_001547602.1| hypothetical protein BC1G_13933 [Botryotinia fuckeliana B05.10]
Length = 768
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 137/240 (57%), Gaps = 6/240 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + ++FDG +LP+K ATE+DR K+R K ELL + S+A
Sbjct: 60 MHRVRMLLHFGVTPYLIFDGDYLPSKAATEKDREKRRKDSKRLGQELLNAGKTSQAYLEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT +MA +VI + GV +VAP+EADAQM YL G D +++EDSDLLVFGA
Sbjct: 120 QKAVDVTPEMARHVIDELKEMGVQYVVAPYEADAQMVYLERKGVIDGILSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD GNC +++ + + L ++DA+FR M ILSGCDY + MGLK A
Sbjct: 180 KCLLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAILSGCDYLPSMSNMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y E LR I GK + K +L SF+ FL+Q V+ P S +V
Sbjct: 240 --YRLIRKHKTIEKVLRMIQFDGKF----HVPKNYLESFYQAEFTFLHQRVFCPQSLTLV 293
>gi|169767642|ref|XP_001818292.1| exonuclease [Aspergillus oryzae RIB40]
gi|83766147|dbj|BAE56290.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 746
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 156/285 (54%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + ++FDG +LP+K TE DR ++R K EL R +EA
Sbjct: 60 LNRVRMLLYFGVTPYLIFDGDNLPSKAGTESDRHQRRQESKTLGLELQRKGRTAEAYQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I + V +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPLMARQLIDELKKMNVQYMVAPYEADAQLVYLERQGIINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +GLK A
Sbjct: 180 KRLLSKLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ALR + G+ + +L +F L FLYQ V+ P + ++V
Sbjct: 240 YRCIRKYR--NVEKALRMLQFEGQY----HVPTNYLENFKQAELTFLYQRVFCPQAGKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L E ++ E +L ++ + A +A G+LDP + E +
Sbjct: 294 TLTAPEDDVNLE---ELPYIGADVDPELAVGVARGDLDPTTKEPL 335
>gi|443897892|dbj|GAC75231.1| 5'-3' exonuclease [Pseudozyma antarctica T-34]
Length = 730
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 157/281 (55%), Gaps = 9/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I +L +K +VFDG LPAK TE+DR ++R+ + +A +L +A+
Sbjct: 60 LSRIRLLQHFGVKPYLVFDGDKLPAKRGTEDDREQRRNDNLERANQLEREGNMQQARDLF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VD+T +MA +I+ + + + +VAP+EADAQ+A+L G D +ITEDSDLLVFG
Sbjct: 120 SKCVDITPEMAFQLIKVLKQQDIPYVVAPYEADAQLAFLEAEGIIDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +++KLD +GN M +++ + ++ L+ +T +FR M ILSGCDY I GMGLK A
Sbjct: 180 KTVLFKLDQAGNAIEMLQQRFWTNRQLALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ D L+ + + GK+ ++ ++ F L F++Q V+DP ++ +V
Sbjct: 240 HRLLRRYKTVD--KVLQAVRLEGKL----RVPNDYAREFRKAELTFVHQRVFDPRTQRLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L PL D++ L + D A +A G +DP +
Sbjct: 294 TLTPLPDGTHDDM---LPFIGANIQDDVAIGVAEGVIDPIT 331
>gi|393217977|gb|EJD03466.1| PIN domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 415
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 170/311 (54%), Gaps = 27/311 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L H I +VFDG LPAK TE++R KKR+ + +A EL+ + S+A+
Sbjct: 60 MARVRLLRHHGILPYLVFDGGPLPAKLGTEKEREKKREQNIKRANELMSQGKESQARELY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA VI+A +A V +VAP+EADAQ+AYL G D +ITEDSDLLVFG
Sbjct: 120 VKCVDVTPQMAYQVIKALKAENVPYVVAPYEADAQLAYLERMGLVDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKLPS----ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
+ + KLD +S + + R S A L ++DA+FR+M +LSGCDY I G+
Sbjct: 180 RNVHVKLDTVSASVVSISRADFGSPSLAADSFSLIGWSDAQFRWMAMLSGCDYLPSIAGI 239
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GLK A Y E A+R I + GK + K+++ +F +FL+Q VYDP
Sbjct: 240 GLKTA--YQLLKKYKTVEKAVRMIRLDGK----KSVPKDYVDAFFLAEKVFLHQRVYDPC 293
Query: 236 SKEVVPLNPLESE--MRDEV--------------FSQLSLKELELPKDQAFQLALGNLDP 279
K++V L +E + +EV + L+L +L A ++A G+ P
Sbjct: 294 LKKLVYLTSPSNEFCLSEEVEMYIGRFVHSYCSSCALLTLSYRDLEPSLATRIAEGDTCP 353
Query: 280 FSLEEMDQWNP 290
SL +MD NP
Sbjct: 354 ISLNDMDDINP 364
>gi|310796237|gb|EFQ31698.1| hypothetical protein GLRG_06673 [Glomerella graminicola M1.001]
Length = 746
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 155/285 (54%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + +VFDG LP+K ATE R K+R+ K A ELL + S+A
Sbjct: 1 MHRVRMLKHFGVTPYLVFDGDFLPSKAATEGSRAKRREDSKKSAMELLKAGKSSQAALEF 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA N+I + + +VAP+EADAQ+ YL G +++EDSDLLVFG
Sbjct: 61 QKAIDVTPEMARNLIDELKKMDLPYVVAPYEADAQLVYLERQGLIAGILSEDSDLLVFGC 120
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L +TD FR M I SGCDY GI MGLK A
Sbjct: 121 KRLLTKLDQYGNCIEINRRDFCAVREVSLTGWTDTDFRRMAIFSGCDYLEGINNMGLKTA 180
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R I GK ++++ +++ F L FL+Q VY P K++V
Sbjct: 181 YRMMRKYKTP--ERLVRMIQFEGKH----RVSENYMSRFAQAELTFLHQRVYCPKKKQLV 234
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L E D+ + + D A +A+G+++P + E +
Sbjct: 235 CLTEPEE---DKGVEDMPFIGGYVEPDLATAIAVGDVNPITKETI 276
>gi|389641011|ref|XP_003718138.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|351640691|gb|EHA48554.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|440475111|gb|ELQ43812.1| exonuclease 1 [Magnaporthe oryzae Y34]
gi|440490176|gb|ELQ69760.1| exonuclease 1 [Magnaporthe oryzae P131]
Length = 780
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 28/304 (9%)
Query: 2 KYIHMLLAHKIKVI--------MVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG 53
KY+ + H+++++ +VFDG LP+K TE R K+R+ K ELL +
Sbjct: 54 KYVDFAM-HRVRMVKYFGATPYIVFDGDFLPSKALTEASRAKRREESKKAGMELLKAGKP 112
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
++A ++++DVT +MA +I+ + V +VAP+EADAQM YL GY +I+EDS
Sbjct: 113 AQAYQEFQKAIDVTPEMARELIEELKKIDVPYVVAPYEADAQMVYLERNGYVSGIISEDS 172
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
DLLVFGAK+++ KLD G C ++R + + ++ L +TDA+FR M I SGCDY GI
Sbjct: 173 DLLVFGAKRLLTKLDQHGQCIEVNRREFCAVREISLTGWTDAEFRQMAIFSGCDYLDGIN 232
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
MGLK A + P E +R++ GK KI++ +L +F L F++Q V+
Sbjct: 233 KMGLKTAYRMIRKHKTP--EKVIRQLQFEGKH----KISENYLAAFKQAELTFMHQRVFC 286
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKEL-----ELPKDQAFQLALGNLDPFSLEEMDQW 288
P +E+V L E S L ++E+ ++ + + +A G+++P + E +
Sbjct: 287 PEKQELVLLT--------EPTSGLDVEEMPFIGAKVDPELSRAIACGDVNPITKERIILP 338
Query: 289 NPDS 292
P S
Sbjct: 339 TPPS 342
>gi|391873267|gb|EIT82320.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 682
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 154/280 (55%), Gaps = 9/280 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
MLL + ++FDG +LP+K TE DR ++R K EL R +EA +++VD
Sbjct: 1 MLLYFGVTPYLIFDGDNLPSKAGTESDRHQRRQESKTLGLELQRKGRTAEAYQEFQKAVD 60
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT MA +I + V +VAP+EADAQ+ YL G + +I+EDSDLLVFGAK+++
Sbjct: 61 VTPLMARQLIDELKKMNVQYMVAPYEADAQLVYLERQGIINGIISEDSDLLVFGAKRLLS 120
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +GLK A +
Sbjct: 121 KLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCILSGCDYLPNIARLGLKTAYRCIR 180
Query: 186 SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPL 245
+ E ALR + G+ + +L +F L FLYQ V+ P + ++V L
Sbjct: 181 KYR--NVEKALRMLQFEGQY----HVPTNYLENFKQAELTFLYQRVFCPQAGKLVTLTAP 234
Query: 246 ESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
E ++ E +L ++ + A +A G+LDP + E +
Sbjct: 235 EDDVNLE---ELPYIGADVDPELAVGVARGDLDPTTKEPL 271
>gi|302658050|ref|XP_003020735.1| exonuclease, putative [Trichophyton verrucosum HKI 0517]
gi|291184593|gb|EFE40117.1| exonuclease, putative [Trichophyton verrucosum HKI 0517]
Length = 725
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 160/293 (54%), Gaps = 13/293 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML + + +VFDG LP+KEATE R +R+ K E + R +EA +++
Sbjct: 63 IRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ + + +VAP+EAD Q+ YL G + +I+EDSD+LVFGAK++
Sbjct: 123 VDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD +G+C ++R + + + +TD FR+MCILSGCDY T I MGLK A Y
Sbjct: 183 LSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKMGLKTA--Y 240
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ +R + G ++ +L +F L FL+Q V+ P++K +V LN
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGS----NRVPPGYLENFKRAELTFLHQRVFCPIAKTLVMLN 296
Query: 244 PLESEMRDEVFSQL-SLKELELPKDQAFQLALGNLDPFSLE--EMDQWNPDSE 293
PL E + +L E + A +A G+LDP + E E+ + P+ E
Sbjct: 297 PLPDGGNGEDMPYIGTLLEPHV----AIGIACGDLDPITKEPIELKRSYPERE 345
>gi|393228982|gb|EJD36614.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 357
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 143/246 (58%), Gaps = 8/246 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ + ++ H + +VFDG LPAK TEE R+++R+++ + A L S+A+
Sbjct: 60 MQRVRLMQHHHVMPYVVFDGGPLPAKLGTEEKRQQQREANLSTANSLAAQGHHSQARDMY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A RA V IVAP+EADAQ+AYL G D ++TEDSDLLVFGA
Sbjct: 120 VKCVDVTPQMAYQLIKALRAANVPYIVAPYEADAQLAYLERQGLIDAILTEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP--LAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
++ ++KLD SG C + R S P L + D +FR+M +L+GCDY I GMGLK
Sbjct: 180 RQALFKLDSSGTCVSVCRSDFGSPALHPNTLVGWGDDQFRWMAMLAGCDYLDSIPGMGLK 239
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A + E L+ + GK ++ +++L +F L FL+Q VYDP ++
Sbjct: 240 TAHKLLRKYR--TVEKVLQVVRFEGK----CRVPRDYLDNFRIAELAFLHQRVYDPTTER 293
Query: 239 VVPLNP 244
+V P
Sbjct: 294 LVHFTP 299
>gi|327306443|ref|XP_003237913.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326460911|gb|EGD86364.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 725
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 167/311 (53%), Gaps = 15/311 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML + + +VFDG LP+KEATE R +R+ K E + R +EA +++
Sbjct: 63 IRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ + + +VAP+EAD Q+ YL G + +I+EDSD+LVFGAK++
Sbjct: 123 VDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD +G+C ++R + + + +TD FR+MCILSGCDY T I MGLK A Y
Sbjct: 183 LSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKMGLKTA--Y 240
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ +R + G ++ +L +F L FL+Q V+ P++K +V LN
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGS----NRVPPGYLDNFKRAELTFLHQRVFCPIAKALVMLN 296
Query: 244 PLESEMRDEVFSQL-SLKELELPKDQAFQLALGNLDPFSLE--EMDQWNPDSEENLPV-- 298
PL E + +L E + A +A G+LDP + E E+ + P+ E +
Sbjct: 297 PLPDGGNGEDMPYIGTLLEPHV----AIGIACGDLDPITKEPSEIKRSYPERERLVRTGR 352
Query: 299 TSIWSKQYEKP 309
SI S +KP
Sbjct: 353 QSITSSDEKKP 363
>gi|330921374|ref|XP_003299400.1| hypothetical protein PTT_10376 [Pyrenophora teres f. teres 0-1]
gi|311326983|gb|EFQ92536.1| hypothetical protein PTT_10376 [Pyrenophora teres f. teres 0-1]
Length = 725
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 157/279 (56%), Gaps = 9/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML+ I +VFDG +LP+K TE+DRR++R K ELL + + ++AQ L
Sbjct: 60 MNRVRMLIHFGITPYLVFDGDNLPSKAGTEKDRRERRKEGKRLGLELLKVGKAAQAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA VI+ + + +VAP+EAD+Q+AYL G + V++EDSDLLVFG
Sbjct: 120 QKSVDVTPEMARMVIEELKHHNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +I KLD G+C ++R + ++ ++DA FR MCILSGCDY GI G+GLK A
Sbjct: 180 KCLITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCILSGCDYLPGIGGLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + ++ + +K+ F+ F FLYQ VY P+ K++V
Sbjct: 240 HRMLRK------HKTVDRLVKAAQFDGKLKVPAGFMADFDQAEKTFLYQWVYCPIDKKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L ++ + + + E+P + A +A G+L P
Sbjct: 294 NLTSMDDGIS---LADMPYLGEEVPSELATGVARGDLYP 329
>gi|392561830|gb|EIW55011.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 320
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 148/254 (58%), Gaps = 12/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L H I +VFDG LPAK+ TE +R+++RD + A+A L + S+A+ +
Sbjct: 60 MHRVRLLRHHGITPYLVFDGGPLPAKQGTEAERKQRRDENLARANALAAQGKHSQAREYY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A RA GV +VAP+EADAQ+AYL G D +ITEDSDLLVFG
Sbjct: 120 VKCVDVTPQMAYQLIKALRAEGVPYVVAPYEADAQLAYLERIGAVDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGN--CCFMDRE----KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
K +++KLD + + C ++ +A + L ++DA+FR M ILSGCDY I G
Sbjct: 180 KNVLFKLDHAASTVTCIARKDFAAIASTAAGGLSLVGWSDAQFRTMAILSGCDYLPSIPG 239
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+GLK A + EN L + + GK KI + +L +F +FL+Q VYDP
Sbjct: 240 IGLKTA--WTLLRKHKTVENTLSALRLEGK----KKIPQGYLDAFRLAEKVFLHQRVYDP 293
Query: 235 VSKEVVPLNPLESE 248
+V L PL +
Sbjct: 294 AQGCLVHLTPLPGD 307
>gi|326433198|gb|EGD78768.1| exonuclease 1 [Salpingoeca sp. ATCC 50818]
Length = 686
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 157/287 (54%), Gaps = 16/287 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + ML + + ++V DGR+LP+K E+ RR+ R +H + +LL S+A H
Sbjct: 60 MKRLAMLQHYGVTPVVVLDGRNLPSKGEEEKQRRESRRNHLKQGTDLLRAGHRSKALEHF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+T ++ +++ACRA G++C+VAP+EADAQ+A+L + Y VITEDSDLLV+G
Sbjct: 120 QRAIDITPEIGHALVRACRAAGIECVVAPYEADAQLAFLATSKYVHAVITEDSDLLVYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLA----KFTDAKFRYMCILSGCDYWTGIKGMG 176
++++K+D G + ++L ++ +T +FR MCIL+GCDY G+G
Sbjct: 180 PRVLFKMDEYGTGQEIRMQRLFQGAQISTTINFMSWTQRQFRKMCILAGCDYLPSPTGLG 239
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
+K A F I +N + + V G +++ ++ F L F +QPVYDPV+
Sbjct: 240 VKTA----FKIAK-IHDNIDKIVQVIASRG--IRVPADYAEMFRRAELTFDHQPVYDPVT 292
Query: 237 KEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
V L P F+ L D A ++ G L P +LE
Sbjct: 293 STVRRLTPPRVPDHSIAFAGCMLDA-----DVAVRMCKGELHPTTLE 334
>gi|452978258|gb|EME78022.1| hypothetical protein MYCFIDRAFT_116032, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 527
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 151/276 (54%), Gaps = 9/276 (3%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ ML+ +K +VFDG +LP+K TE++R KR K E+L + R S+AQ L+++
Sbjct: 59 VRMLIHFGVKPYLVFDGDYLPSKAHTEKERAAKRKESKRVGLEMLRMGRPSQAQLELQKA 118
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ + V +VAP+EAD+QMAYL G D VI+EDSDLLVFG + +
Sbjct: 119 VDVTPAMARELIEELKKLDVQYVVAPYEADSQMAYLEKKGIIDGVISEDSDLLVFGVQCL 178
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD G C + R S ++ L +TD +FR M +LSGCDY GI MGLK A Y
Sbjct: 179 LTKLDQYGECVMISRADFTSCREISLVGWTDREFRMMAMLSGCDYLPGIDKMGLKTA--Y 236
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ +R + GK+ ++ K +L F F+YQ V+ P + + LN
Sbjct: 237 RLVRKHKTLDRVVRTVQFDGKM----RVPKGYLEDFSRAEKTFMYQWVFCPEDQCLTHLN 292
Query: 244 PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L + + + + + + A +A G+LDP
Sbjct: 293 QLPTGLTAD---SMPFIGKAVDPELAAGVACGDLDP 325
>gi|326470462|gb|EGD94471.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 725
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 165/310 (53%), Gaps = 13/310 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML + + +VFDG LP+KEATE R +R+ K E + R +EA +++
Sbjct: 63 IRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ + + +VAP+EAD Q+ YL G + +I+EDSD+LVFGAK++
Sbjct: 123 VDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD +G+C ++R + + + +TD FR+MCILSGCDY I MGLK A Y
Sbjct: 183 LSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLANIPKMGLKTA--Y 240
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ +R + G ++ +L +F L FL+Q V+ P++K +V LN
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGS----NRVPPGYLDNFKRAELTFLHQRVFCPIAKALVTLN 296
Query: 244 PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE--EMDQWNPDSEENLPV--T 299
PL E + L +P A +A G+LDP + E E+ + P+ E +
Sbjct: 297 PLPDGGNGEDMPYIGA--LLVPH-VAIGIACGDLDPITKEPIEIKRSYPERERLVRTGRQ 353
Query: 300 SIWSKQYEKP 309
SI S +KP
Sbjct: 354 SITSSDEKKP 363
>gi|320591287|gb|EFX03726.1| exodeoxyribonuclease 1 [Grosmannia clavigera kw1407]
Length = 805
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 162/283 (57%), Gaps = 11/283 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + M+ + +VFDG LP+K ATE R K+R+ + KA E LI G+ Q+ L
Sbjct: 60 LNRVRMVQHFGVIPYLVFDGDFLPSKAATEASRAKRREESR-KAGEALI-KAGNTKQAFL 117
Query: 61 --RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
++++D+T +MA +VI+ + G+ IVAP+EADAQM YL G +++EDSDLLVF
Sbjct: 118 EFQKAIDITPEMACHVIEELKKLGLPYIVAPYEADAQMVYLEREGLVSGILSEDSDLLVF 177
Query: 119 GAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
GAK+++ K+D+ G+C ++R + ++ L +TD +FR+M ILSGCDY GI +GLK
Sbjct: 178 GAKRLLTKMDMQGHCIEINRRDFCACREISLTDWTDREFRHMAILSGCDYLEGIGNLGLK 237
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A Y E +R + GK ++ + +L SF L F+YQ V+ PV +E
Sbjct: 238 TA--YRMIRKHKTVEKVVRMLQFDGKF----RVHENYLASFRQAELTFIYQRVFCPVKQE 291
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
+ L + M ++ + + ++ D A +ALG L+P +
Sbjct: 292 LAFLTEPTASMGLDLDGMRFIGQ-KMDHDVARGVALGQLNPMT 333
>gi|326478646|gb|EGE02656.1| exodeoxyribonuclease [Trichophyton equinum CBS 127.97]
Length = 725
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 165/310 (53%), Gaps = 13/310 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML + + +VFDG LP+KEATE R +R+ K E + R +EA +++
Sbjct: 63 IRMLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ + + +VAP+EAD Q+ YL G + +I+EDSD+LVFGAK++
Sbjct: 123 VDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD +G+C ++R + + + +TD FR+MCILSGCDY I MGLK A Y
Sbjct: 183 LSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLANIPKMGLKTA--Y 240
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ +R + G ++ +L +F L FL+Q V+ P++K +V LN
Sbjct: 241 RSIRKHKTVDRVVRMVQFEGS----NRVPPGYLDNFKRAELTFLHQRVFCPIAKALVTLN 296
Query: 244 PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE--EMDQWNPDSEENLPV--T 299
PL E + L +P A +A G+LDP + E E+ + P+ E +
Sbjct: 297 PLPDGGNGEDMPYIGA--LLVPH-VAIGIACGDLDPITKEPIEIKRSYPERERLVRTGRQ 353
Query: 300 SIWSKQYEKP 309
SI S +KP
Sbjct: 354 SITSSDEKKP 363
>gi|302498525|ref|XP_003011260.1| exonuclease, putative [Arthroderma benhamiae CBS 112371]
gi|291174809|gb|EFE30620.1| exonuclease, putative [Arthroderma benhamiae CBS 112371]
Length = 661
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 166/309 (53%), Gaps = 15/309 (4%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
ML + + +VFDG LP+KEATE R +R+ K E + R +EA +++VD
Sbjct: 1 MLQHYGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTTEAYQEFQKAVD 60
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT MA +I+ + + +VAP+EAD Q+ YL G + +I+EDSD+LVFGAK+++
Sbjct: 61 VTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRLLS 120
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
KLD +G+C ++R + + + +TD FR+MCILSGCDY T I MGLK A Y
Sbjct: 121 KLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKMGLKTA--YRS 178
Query: 186 SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPL 245
+ +R + G ++ +L +F L FL+Q V+ P++K +V LNPL
Sbjct: 179 IRKHKTVDRVVRMVQFEGS----NRVPPGYLDNFKRAELTFLHQRVFCPIAKTLVMLNPL 234
Query: 246 ESEMRDEVFSQL-SLKELELPKDQAFQLALGNLDPFSLE--EMDQWNPDSEENLPV--TS 300
E + +L E + A +A G+LDP + E E+ + P+ E + S
Sbjct: 235 PDGGNGEDMPYIGTLLEPHV----AIGIACGDLDPITKEPIELKRLYPERERLVRTGRQS 290
Query: 301 IWSKQYEKP 309
I S +KP
Sbjct: 291 ITSSDEKKP 299
>gi|407917461|gb|EKG10769.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 730
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 135/240 (56%), Gaps = 6/240 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML+ IK +VFDG HLP KE T ++R KR K ELL L + S+A L
Sbjct: 60 MHRVRMLIHFGIKPYLVFDGDHLPGKEVTNKERAAKRKESKRVGMELLKLGKTSQAHLEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT +MA I+ + VD +VAP+EAD+QM YL G +++EDSDLLVFGA
Sbjct: 120 QKAVDVTPEMARMFIEELKMLNVDYVVAPYEADSQMVYLEKRGIIQGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +I KLD G C ++R + ++ L +TD +FR M ILSGCDY I MGL A
Sbjct: 180 KCLITKLDNYGECVVINRADFTACKEISLVGWTDDQFRQMAILSGCDYLPSISKMGLMTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y + LR+I GK K+ + +F + FLYQ V+ P +K++V
Sbjct: 240 --YRLLRKYKTVDRLLRQIQFDGKF----KMPAGYPEAFAQAEMTFLYQWVFCPAAKQLV 293
>gi|345569752|gb|EGX52581.1| hypothetical protein AOL_s00007g569 [Arthrobotrys oligospora ATCC
24927]
Length = 537
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 8/287 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + + +VFDG +LP K+ TE DR K+R S + ELL L R S+AQS L
Sbjct: 60 MHRVRMLQHYGVTPYLVFDGDYLPGKKGTELDREKRRKSSRETGLELLRLGRASQAQSEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++S+DVT MA +I + + IVAP+EADAQMAYL G +++EDSDLLVFGA
Sbjct: 120 QKSIDVTPLMARRLIDELKKANIPYIVAPYEADAQMAYLERIGEVSAILSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KL G C + R P +A ++D++F M +LSGCDY I MG+K A
Sbjct: 180 KCLLTKLGQYGECIAIHRSDFPGVSGASMAGWSDSEFCRMAVLSGCDYLGNIPKMGIKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+V D +R I + G K+F+ + + F YQ VY P+S +++
Sbjct: 240 YKFVRRYKSAD--KIVRAIRMDGSFAVPASYEKDFIAA----EMTFKYQRVYCPLSCQLI 293
Query: 241 PLNPLESEMRDEVFSQLSLKELEL-PKDQAFQLALGNLDPFSLEEMD 286
N + + D+V ++ + + A ++A G LDP + E++
Sbjct: 294 SCNG-DMTLPDDVGAEQERNFGGIYDAETACKVASGELDPITKLELE 339
>gi|449303621|gb|EMC99628.1| hypothetical protein BAUCODRAFT_136211 [Baudoinia compniacensis
UAMH 10762]
Length = 730
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 160/285 (56%), Gaps = 9/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + ML+ + +VFDG +LP+K TE++R +R K ELL + + ++A L
Sbjct: 60 LNRVRMLIHFGVSPYLVFDGDYLPSKAHTEKERAARRKEAKRVGLELLRVGKPAQAYQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT MA +I+ + GV +VAP+EAD+Q+AYL G +++EDSDLLVFGA
Sbjct: 120 QKAIDVTPLMARELIEELKPLGVSYVVAPYEADSQLAYLEKQGIISGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G C + R+ S ++ L +TD +FR M +LSGCDY GI+G+G+K A
Sbjct: 180 KCLLTKLDQYGECVMIRRQDFTSCREVSLVGWTDREFRMMSMLSGCDYLPGIEGLGVKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y E A+R + GK K+ +L +F FLYQ V+ P ++ +V
Sbjct: 240 --YRLVRKHKAIEPAVRMLQFDGK----KKVPPGYLEAFSRAERTFLYQWVFCPEAQRLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
LN +E+ +V + + P + A +A G +DP + E +
Sbjct: 294 NLNAPPAEL--DVAGMPYIGQCVEP-EVAQAVAAGEVDPNTKERL 335
>gi|367048059|ref|XP_003654409.1| hypothetical protein THITE_2117416 [Thielavia terrestris NRRL 8126]
gi|347001672|gb|AEO68073.1| hypothetical protein THITE_2117416 [Thielavia terrestris NRRL 8126]
Length = 760
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 160/286 (55%), Gaps = 11/286 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG LP+K TE R K+R+ K ELL + S+A + L
Sbjct: 60 MHRVRMFKYFGVTPYLVFDGDMLPSKAKTEASRAKRREESKRIGLELLRAGKPSQAYAEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA ++I+ + V +VAP+EADAQ+ YL G +++EDSDLLVFGA
Sbjct: 120 QKAIDVTPEMARHLIEELKKEEVPYVVAPYEADAQLVYLERQGLISGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G C ++R + ++ L +TD++FR+M ILSGCDY G+ +GLK A
Sbjct: 180 KRLLTKLDQHGQCVEINRRDFCAVREISLTGWTDSEFRHMAILSGCDYLEGLNNIGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + GK ++ + +L F L FLYQ V+ P +++V
Sbjct: 240 YRLIRKHKTP--ERVVRMLRFEGKH----QVPENYLEDFQQAELTFLYQRVFCPRKQDIV 293
Query: 241 PLN-PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L P S DE+ + E E+ A +A+G+++P + + +
Sbjct: 294 LLTEPGPSVNVDEMPFIGAPIETEM----ARSIAVGDVNPITRQRI 335
>gi|71018115|ref|XP_759288.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
gi|46099138|gb|EAK84371.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
Length = 828
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 144/251 (57%), Gaps = 6/251 (2%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML +K +VFDG LPAK+ TE++R ++R + +A EL + +A+ +
Sbjct: 63 IRMLQHFGVKPYLVFDGDKLPAKKGTEDEREQRRSDNLRRAKELEQEKKLQQARDVYAKC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VD+T +MA +I+ + + +VAP+EADAQ+AYL G D V+TEDSDLLVFG K +
Sbjct: 123 VDITPEMAFQLIKVLKEDNIPYVVAPYEADAQLAYLEAEGIIDGVVTEDSDLLVFGCKTV 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
++KLD +GN M + + + ++ L+ +T +FR M ILSGCDY I GMGLK A
Sbjct: 183 LFKLDQAGNAVEMLQHRFWTNRQVALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAHRL 242
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ D L+ + + GK+ +I + F L F++Q V+DP S+++V L
Sbjct: 243 LRRYKTVD--KVLQAVRLEGKM----RIPPTYSREFRKAELTFVHQRVFDPRSQKLVTLT 296
Query: 244 PLESEMRDEVF 254
PL D++
Sbjct: 297 PLPDGTHDDML 307
>gi|336259943|ref|XP_003344770.1| EXO1 protein [Sordaria macrospora k-hell]
Length = 722
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 159/287 (55%), Gaps = 13/287 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG +LP+K TE DR +R++ + ELL + S+A L
Sbjct: 60 MHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRDNRREASRRTGLELLKAGKPSQAHIEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+T +MA ++I + V +VAP+EADAQ+ YL G V++EDSDLLVFGA
Sbjct: 120 QKAIDITPEMARHLIDELKKADVPYVVAPYEADAQLIYLERQGIISGVVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ K+D G C ++R + + ++ L +TDA+FR+M I SGCDY + MGLK A
Sbjct: 180 KRLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCDYLDSLPSMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + P E ++K+ GKI ++ ++L F L F+YQ V+ PV + VV
Sbjct: 240 YRMIRKLKTP--ERIVKKLQFDGKI----RVPDDYLERFKQAELTFIYQRVFCPVKQAVV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ--AFQLALGNLDPFSLEEM 285
L DE + + + P D A +A G+++P + + +
Sbjct: 294 CLT-----EPDESINVDDMPYIGAPIDAKLARAIAAGDVNPITKDRI 335
>gi|380088926|emb|CCC13206.1| putative EXO1 protein [Sordaria macrospora k-hell]
Length = 748
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 159/287 (55%), Gaps = 13/287 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG +LP+K TE DR +R++ + ELL + S+A L
Sbjct: 60 MHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRDNRREASRRTGLELLKAGKPSQAHIEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+T +MA ++I + V +VAP+EADAQ+ YL G V++EDSDLLVFGA
Sbjct: 120 QKAIDITPEMARHLIDELKKADVPYVVAPYEADAQLIYLERQGIISGVVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ K+D G C ++R + + ++ L +TDA+FR+M I SGCDY + MGLK A
Sbjct: 180 KRLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCDYLDSLPSMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + P E ++K+ GKI ++ ++L F L F+YQ V+ PV + VV
Sbjct: 240 YRMIRKLKTP--ERIVKKLQFDGKI----RVPDDYLERFKQAELTFIYQRVFCPVKQAVV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ--AFQLALGNLDPFSLEEM 285
L DE + + + P D A +A G+++P + + +
Sbjct: 294 CLT-----EPDESINVDDMPYIGAPIDAKLARAIAAGDVNPITKDRI 335
>gi|296804836|ref|XP_002843266.1| exodeoxyribonuclease 1 [Arthroderma otae CBS 113480]
gi|238845868|gb|EEQ35530.1| exodeoxyribonuclease 1 [Arthroderma otae CBS 113480]
Length = 729
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 153/283 (54%), Gaps = 9/283 (3%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ ML + I +VFDG LP+KEA E R +R+ + E + R +EA +++
Sbjct: 63 LRMLQHYGITPYIVFDGGMLPSKEAIEASRAARREESRKLGEEHMRRGRTAEAYQEFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ + + +VAP+EAD Q+ YL G + +I+EDSD+LVFGAK++
Sbjct: 123 VDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD +G+C ++R + + L +TD FR+MCILSGCDY T I MGLK A
Sbjct: 183 LSKLDKNGDCIEINRGDFAACRDISLIGWTDENFRHMCILSGCDYLTNIPRMGLKTAYRS 242
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ D R + + GS ++ +L SF L FL+Q V+ P +K +V LN
Sbjct: 243 IRKHKSVD-----RVVKMVQFDGSS-RVPPGYLESFKRAELTFLHQRVFCPTAKCLVMLN 296
Query: 244 PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
PL E + L D A +A G+LDP + E ++
Sbjct: 297 PLPDGGNGE---DMPFVGAILDPDVAIAIACGDLDPMTKEPIE 336
>gi|242823476|ref|XP_002488074.1| exonuclease, putative [Talaromyces stipitatus ATCC 10500]
gi|218712995|gb|EED12420.1| exonuclease, putative [Talaromyces stipitatus ATCC 10500]
Length = 767
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 137/243 (56%), Gaps = 6/243 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG LP+K TE DR KKR+ + EL + R +EA
Sbjct: 60 LNRVRMLLFFGVTPYLVFDGGDLPSKSGTEADRFKKREDSRKLGLELQSIGRTAEAYQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT +MA +I+ + + +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPEMARQLIEELKRMKIQYVVAPYEADAQLVYLEQQGIINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++++ KLD G+C ++R + + L + DA FR MCILSGCDY + I +GLK A
Sbjct: 180 RRLLSKLDQHGDCIEINRGDFAACRDISLIGWIDADFRRMCILSGCDYLSNIPKLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y D E LR + G + ++ +L +F FLYQ V+ P ++ +V
Sbjct: 240 --YRSMRKYRDVEKVLRVLQFEG----HYQVPAGYLDNFRKAENTFLYQRVFCPTAQRLV 293
Query: 241 PLN 243
L
Sbjct: 294 TLT 296
>gi|406701048|gb|EKD04204.1| hypothetical protein A1Q2_01501 [Trichosporon asahii var. asahii
CBS 8904]
Length = 743
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 29/306 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ + ML + ++ ++VFDG LPAK+ TE+ R K R H A+A L R +A+
Sbjct: 60 IQRVRMLRMNNVEPLIVFDGGPLPAKKGTEDSRAKSRADHMARALALEAQGRLKDARDCY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +D+T +MA +I + VD IVAP+EADAQ+ +L GY D +ITEDSDLLVFG
Sbjct: 120 TKCIDITPEMAYQLI---KVENVDYIVAPYEADAQLCFLEKEGYVDGIITEDSDLLVFGC 176
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI------------LSGCDY 168
K +++K+D GNC ++ R + + +P+ +TD +FR M + LSGCDY
Sbjct: 177 KTVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDY 236
Query: 169 WTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLY 228
I G+GLKKA + + E ++ I + G+++ + ++ +F+ L FL+
Sbjct: 237 LPSIVGIGLKKAHRLLRRLK--TVERVIQSIRLD---GAHL-VPDGYIEAFNQAELAFLH 290
Query: 229 QPVYDPVSKEVVPLNPLES---EMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
Q VY P K +VPL + DE + L ++ + A +ALG+L P S + +
Sbjct: 291 QRVYCPHEKRLVPLCEFPASGLSGDDEKWIGLDVEPM-----VAQGMALGDLHPESRKPI 345
Query: 286 DQWNPD 291
+ P+
Sbjct: 346 EDLWPN 351
>gi|401881918|gb|EJT46196.1| hypothetical protein A1Q1_05280 [Trichosporon asahii var. asahii
CBS 2479]
Length = 743
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 29/306 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ + ML + ++ ++VFDG LPAK+ TE+ R K R H A+A L R +A+
Sbjct: 60 IQRVRMLRMNNVEPLIVFDGGPLPAKKGTEDSRAKSRADHMARALALEAQGRLKDARDCY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +D+T +MA +I + VD IVAP+EADAQ+ +L GY D +ITEDSDLLVFG
Sbjct: 120 TKCIDITPEMAYQLI---KVENVDYIVAPYEADAQLCFLEKEGYVDGIITEDSDLLVFGC 176
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI------------LSGCDY 168
K +++K+D GNC ++ R + + +P+ +TD +FR M + LSGCDY
Sbjct: 177 KTVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDY 236
Query: 169 WTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLY 228
I G+GLKKA + + E ++ I + G+++ + ++ +F+ L FL+
Sbjct: 237 LPSIVGIGLKKAHRLLRRLK--TVERVIQSIRLD---GAHL-VPDGYIEAFNQAELAFLH 290
Query: 229 QPVYDPVSKEVVPLNPLES---EMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
Q VY P K +VPL + DE + L ++ + A +ALG+L P S + +
Sbjct: 291 QRVYCPHEKRLVPLCEFPASGLSGDDEKWIGLDVEPM-----VAQGMALGDLHPESRKPI 345
Query: 286 DQWNPD 291
+ P+
Sbjct: 346 EDLWPN 351
>gi|296421974|ref|XP_002840538.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636756|emb|CAZ84729.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 158/283 (55%), Gaps = 11/283 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +HML + MVFDG +LP+K TE +R ++R +AK ELL L + EAQ L
Sbjct: 60 MSRVHMLRHFGVTPYMVFDGDYLPSKSWTEAERERRRQERRAKGLELLKLRKMREAQEQL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++S+DVT MA ++I CR GV+CIVAP+EADAQ+ YL G +I+EDSDLL FG
Sbjct: 120 QKSIDVTPLMARHLIDECRRIGVECIVAPYEADAQLYYLEKTGIIHGIISEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I K+D G C +DR+ + L+ +TD +FRYMCILSGCDY I +GL
Sbjct: 180 KNLITKMDKFGGCYTIDRDDFTAIRGSGFSLSGWTDTEFRYMCILSGCDYLPNIPRLGLL 239
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V P E ++ + + + + ++L F NL FL+Q V+ P +++
Sbjct: 240 GAYKLVKRHKTP--ERIIQSV----RFDATKTVPVDYLDGFRRANLTFLHQWVFCPKAEK 293
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
+V + ++ + + EL + A +A G+LDP +
Sbjct: 294 MVMVTEPDAVVDKQYLDGCG---RELDAETARGIACGDLDPVT 333
>gi|50553030|ref|XP_503925.1| YALI0E14014p [Yarrowia lipolytica]
gi|49649794|emb|CAG79518.1| YALI0E14014p [Yarrowia lipolytica CLIB122]
Length = 546
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 155/280 (55%), Gaps = 11/280 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ + L + V++VFDG LP+K T+E R RD +A L+ R SEA +
Sbjct: 60 MRKVEFLKRCGVDVLIVFDGGALPSKRGTDEKRHALRDQAHKEALALMSRGRRSEAVNLF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++ +T +M + + +++ + +VAP+EADAQ+ YL AGYA +I+EDSDL+V+GA
Sbjct: 120 QKATRITQEMVHQLTELLKSQRIPFVVAPYEADAQLVYLEKAGYATGIISEDSDLVVYGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF-RYMCILSGCDYWTGIKGMGLKK 179
+ ++ KLD SG C +D ++ S + L ++ RYM ILSGCDY G+ +G K+
Sbjct: 180 QMLVTKLDPSGGCVTVDGSRISSCSDLELGSEVPLEYLRYMAILSGCDYCDGVPNVGPKR 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A Y+ P E ++ + + G S +FL FH N FLYQ VY P ++ +
Sbjct: 240 AARYIRRWQTP--EAIIKALRMDGYNSS-----PDFLERFHAANFTFLYQRVYCPEARRL 292
Query: 240 VPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
V LN E E+ ++V + E+P+ A +A G + P
Sbjct: 293 VHLNEPEDELDEKVDFHIG---AEIPQGLARAIATGLVHP 329
>gi|315047586|ref|XP_003173168.1| exodeoxyribonuclease 1 [Arthroderma gypseum CBS 118893]
gi|311343554|gb|EFR02757.1| exodeoxyribonuclease 1 [Arthroderma gypseum CBS 118893]
Length = 722
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 155/292 (53%), Gaps = 11/292 (3%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML H + +VFDG LP+KEATE R +R+ K E + R +EA +++
Sbjct: 63 IRMLQHHGVTPYIVFDGGMLPSKEATEASRAARREESKKLGEEHMRRGRTAEAYQEFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ + + +VAP+EAD Q+ YL G + +I+EDSD+LVFGAK++
Sbjct: 123 VDVTPYMARVLIEELKKHKIKYLVAPYEADPQLVYLEKQGIINGIISEDSDMLVFGAKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ KLD +G+C ++R + + L +TD FR+MCILSGCDY I +GLK A Y
Sbjct: 183 LSKLDKNGDCIEINRGDFTACRDISLIGWTDENFRHMCILSGCDYLANIPKIGLKTA--Y 240
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ ++ I G ++ +L +F+ L FL+Q V+ P +K +V LN
Sbjct: 241 RSIRKHKTVDRVVKMIQFDGS----NRVPPGYLDNFNRAELTFLHQRVFCPTTKALVMLN 296
Query: 244 PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE--EMDQWNPDSE 293
PL E + L +A G+LDP + E E+ + P+ E
Sbjct: 297 PLRDGGNGEDMPYIGAI---LEPHITIGIAYGDLDPITKEPIEIKRSYPERE 345
>gi|367031744|ref|XP_003665155.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
gi|347012426|gb|AEO59910.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
Length = 760
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 159/286 (55%), Gaps = 11/286 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG LP+K TE R K+R+ K ELL + S+A S L
Sbjct: 60 MHRVRMFKYFGVTPYVVFDGDFLPSKAKTEAARSKRREESKRIGLELLRAGKPSQAYSEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA ++I+ + V +VAP+EADAQ+ YL G +++EDSDLLVFGA
Sbjct: 120 QKAIDVTPEMARHLIEELKKADVPYVVAPYEADAQLVYLERQGLISGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G C ++R + ++ L +TD +FR+M ILSGCDY G+ +GLK A
Sbjct: 180 KRLLTKLDQHGQCVEINRRDFCAVREISLTGWTDREFRHMAILSGCDYLDGVSNIGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
V P E ++ + GK +I +L F L FL+Q V+ P +++V
Sbjct: 240 YRLVRKHKTP--ERIIKMLRFDGK----HQIPDSYLEDFKQAELTFLHQRVFCPKKQDIV 293
Query: 241 PLNPLE-SEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L L+ S DE+ + E EL A +A+G+++P + E +
Sbjct: 294 FLTELDPSSNPDEMRFIGAPVETEL----ARSIAIGDVNPITKERI 335
>gi|406861963|gb|EKD15015.1| putative exonuclease [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 776
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + M+FDG +LP+K ATE DR K+R+ K ELL + S+A
Sbjct: 60 MHRVRMLQHFGVIPYMIFDGDYLPSKAATEADRSKRREESKRAGMELLNAGKTSQAYLEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT +MA +I R GV IVAP+EADAQM YL G D +++EDSDLLVFGA
Sbjct: 120 QKAVDVTPEMARQLIDELRKTGVQYIVAPYEADAQMVYLERNGVIDGILSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD GNC +++ + ++ L +++ +FR M ILSGCDY I MGLK A
Sbjct: 180 KCLLTKLDQYGNCIEINKADFSACREITLTGWSEKEFRTMAILSGCDYLASINNMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
Y E +R + GK + + +L +F FL+Q V+
Sbjct: 240 --YRMVRKHKTIEKIIRMLTFDGKF----HVPQGYLEAFRQAEFTFLHQRVF 285
>gi|425781231|gb|EKV19207.1| Exonuclease, putative [Penicillium digitatum PHI26]
gi|425783409|gb|EKV21262.1| Exonuclease, putative [Penicillium digitatum Pd1]
Length = 673
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 152/280 (54%), Gaps = 9/280 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
MLL +K +VFDG +LP+K TE+DR K+R K EL + EA +++VD
Sbjct: 1 MLLFFGVKPYLVFDGDNLPSKAGTEQDRYKRRQESKTLGLELQRKGKMPEAYQEFQKAVD 60
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT MA +I+ + V +VAP+EADAQ+ YL G +I+EDSDLLVFGAK++I
Sbjct: 61 VTPYMARQLIEELKQMNVQYVVAPYEADAQLVYLEQQGDIHGIISEDSDLLVFGAKRLIS 120
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
KLD G C ++R + ++ L F+D FR MCILSGCDY I +GLK A Y
Sbjct: 121 KLDQHGECIEINRADFTACREVNLVGFSDPDFRNMCILSGCDYLANIPKLGLKTA--YRI 178
Query: 186 SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPL 245
+ E ALR + G ++ ++L +F L FLYQ V+ ++++V L
Sbjct: 179 IRKHRNVEKALRMLQFDGNF----RVPADYLANFKQAELTFLYQRVFCRKAEKLVTLTLP 234
Query: 246 ESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
+ ++ V + ++ A ++ G+LDP + E +
Sbjct: 235 DDDVNLAVLPYIG---ADMEPQIAVGVSRGDLDPTTKEPI 271
>gi|452004232|gb|EMD96688.1| hypothetical protein COCHEDRAFT_1220269 [Cochliobolus
heterostrophus C5]
Length = 724
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 156/281 (55%), Gaps = 9/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML+ + +VFDG +LP+K TE+ RR++R K ELL + + ++AQ L
Sbjct: 60 MHRVRMLIHFGVTPYLVFDGDNLPSKAGTEKGRRERRKESKRLGLELLKVGKVAQAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA VI+ + + +VAP+EAD+Q+AYL G + V++EDSDLLVFG
Sbjct: 120 QKSVDVTPEMARMVIEELKKNNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +I KLD G C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 180 KCLITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + ++ + +K+ F+ SF FLYQ VY PV +++V
Sbjct: 240 HRMLRK------HKTVDRLVKAAQFDGKLKVPAGFMESFDQAEKTFLYQWVYCPVEEKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L PL + + + E+P A +ALG+L P S
Sbjct: 294 NLTPLGDGVN---LADMPYIGEEVPPHLAKGVALGDLYPRS 331
>gi|449544360|gb|EMD35333.1| hypothetical protein CERSUDRAFT_66521 [Ceriporiopsis subvermispora
B]
Length = 320
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 148/251 (58%), Gaps = 16/251 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L + I+ +VFDG LPAK+ TE +R+ +RD + A+A L + S+A+ +
Sbjct: 60 MHRVRLLRHYNIEPYIVFDGGPLPAKKGTESERKARRDENIARANALAAQGKHSQAREYY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA I+A RA V +VAP+EADAQ+AYL G D +ITEDSDLLVFG
Sbjct: 120 VKCIDVTPQMAYQFIKALRAECVPYVVAPYEADAQLAYLERTGVVDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCF-MDREKLP-----SALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
K +++KLD++ + + R S+ + L ++D +FR M ILSGCDY I G
Sbjct: 180 KTVLFKLDVAASTVTRVSRADFASITSGSSSGISLVGWSDVQFRAMAILSGCDYLPSIPG 239
Query: 175 MGLKKAKDYVFSIM--DPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
+GLK A +S++ EN +R +N+ GK K+ ++L +F +FLYQ VY
Sbjct: 240 IGLKTA----WSLLRKHKTVENVVRALNLEGK----KKVPHKYLEAFRMAEKVFLYQRVY 291
Query: 233 DPVSKEVVPLN 243
DP + +V L
Sbjct: 292 DPTQQRLVYLT 302
>gi|346322204|gb|EGX91803.1| exonuclease, putative [Cordyceps militaris CM01]
Length = 763
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 165/292 (56%), Gaps = 24/292 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL IK MVFDG +LP+K ATE+ R KKR+ K A +L+ + S+A
Sbjct: 60 MHRVRMLLHFGIKPYMVFDGDYLPSKAATEDSRAKKREEKKKLANDLMKAGKPSQAAQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +IQ + + IVAP+EAD+Q+ YL G D ++++DSDLLVFGA
Sbjct: 120 QKCVDITPEMASTLIQELKKLDISYIVAPYEADSQLVYLERQGLIDGILSDDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++++ KLD GNC ++R + ++ L+ ++D +FR M I+SGCDY G+ G+GLK A
Sbjct: 180 QRLLTKLDQYGNCIEINRRDFGACREISLSGWSDTEFRRMAIMSGCDYLNGLPGVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + GK ++++ +LT F+ L FL+Q V+ P + +V
Sbjct: 240 YRMMRKSKSP--ERVVRMLQFDGK-----RVSENYLTQFYQAELTFLHQWVFCPTQRGLV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAF-------QLALGNLDPFSLEEM 285
L L+ + E+P AF ++A G+++P + E +
Sbjct: 293 HLTELDG----------TRTAAEMPFIGAFVEPAIARRVAAGDVNPITKEPI 334
>gi|212546421|ref|XP_002153364.1| exonuclease, putative [Talaromyces marneffei ATCC 18224]
gi|210064884|gb|EEA18979.1| exonuclease, putative [Talaromyces marneffei ATCC 18224]
Length = 749
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 139/243 (57%), Gaps = 6/243 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + MLL + +VFDG LP+K TE DR KKR+ + A EL R +EA
Sbjct: 60 LNRVRMLLFFGVTPYLVFDGGDLPSKSGTEADRFKKREDSRKLALELQSKGRVAEAYQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT +MA +I+ + V +VAP+EADAQ+ YL G + +I+EDSDLLVFGA
Sbjct: 120 QKAVDVTPEMARQLIEELKRMKVQYVVAPYEADAQLVYLERQGIINGIISEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G+C ++R + + L ++DA FR MCILSGCDY + I +GLK A
Sbjct: 180 KRLLSKLDQHGDCIEINRGDFAACRDISLIGWSDADFRRMCILSGCDYLSNIPKLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + D LR + G + ++ +L SF FLYQ V+ P ++++V
Sbjct: 240 YRSMRKYKNVD--KVLRVLQFEG----HYQVPAGYLDSFRQAENTFLYQRVFCPNAQKLV 293
Query: 241 PLN 243
L
Sbjct: 294 TLT 296
>gi|330796677|ref|XP_003286392.1| hypothetical protein DICPUDRAFT_150348 [Dictyostelium purpureum]
gi|325083664|gb|EGC37111.1| hypothetical protein DICPUDRAFT_150348 [Dictyostelium purpureum]
Length = 916
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 161/294 (54%), Gaps = 24/294 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML +K+ +++FDG LP K+ E++R + R+ +K+K L+ S+A
Sbjct: 60 LNRIKMLQNYKVIPVVIFDGGPLPNKKGKEQERFQHREEYKSKGKAFLLEGNKSQANICF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A N+I+ R ++ +VAP+EADAQ+ +L+I G D +ITEDSDL+ +GA
Sbjct: 120 QKAVDITPRLAFNLIKELRKHKIEYLVAPYEADAQLTFLSITGQVDAIITEDSDLVAYGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+I K+D G + E L S K FT R MCILSGCDY + GMGLK
Sbjct: 180 SNLILKMDKDGYAQEIKTEDLGSCKKDGYDFIDFTQTMLRQMCILSGCDYLPSLPGMGLK 239
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYD 233
+ F + L++ K+ Y+K TKE+ F+ + F +Q VYD
Sbjct: 240 TS----FKL--------LKQHRDIEKVFKYLKREKPGFTKEYEQQFYKADFTFRHQRVYD 287
Query: 234 PVSKEVVPLNPLESEM-RDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
PV+K + L PL+ + DE+ L E + A ++ALG +DP +L E +
Sbjct: 288 PVTKSITTLFPLDKDYPEDEIDFIGPLIEDSI----AERIALGIIDPETLIEFE 337
>gi|258564967|ref|XP_002583228.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906929|gb|EEP81330.1| predicted protein [Uncinocarpus reesii 1704]
Length = 746
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 156/287 (54%), Gaps = 22/287 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + MLL + + +VFDG LP+K++TEE R +R+ +A E R ++AQ L
Sbjct: 77 MHRVRMLLYYGVTPYLVFDGGRLPSKDSTEEARAARREESRALGLEHYRTGRAAQAQQEL 136
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT MA +I+ + + IVAP+EADAQ+ YL G + +I+EDSD+LVFGA
Sbjct: 137 QKAIDVTPYMARVLIEELKKLNIQYIVAPYEADAQLVYLEKEGIINGIISEDSDMLVFGA 196
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ ++ KLD G+C + R L + A +TD FR MCILSGCDY I G+GLK +
Sbjct: 197 RILVSKLDKHGDCIEISRNNLSACRDASFAGWTDENFRQMCILSGCDYLPNIPGLGLKTS 256
Query: 181 KDYVFSIMDPDFENALRKINVYGKI------GSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+ N LRK ++ G ++ +L F L FL+Q V+ P
Sbjct: 257 -----------YRN-LRKYKTVERVVKMVQYGGQTRVPSNYLEEFRRAELTFLHQRVFCP 304
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
++++V LNPL ++ E L ++ + A +A G LDP +
Sbjct: 305 RARKLVTLNPLPHHIQGE----LPFIGSDIGSEIAIGIACGELDPIT 347
>gi|328774002|gb|EGF84039.1| hypothetical protein BATDEDRAFT_7998 [Batrachochytrium
dendrobatidis JAM81]
Length = 319
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 146/261 (55%), Gaps = 13/261 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ L H I I+VFDG LP K TE DR K+R+ +AK E L + +AQ +
Sbjct: 63 VRQLQNHNIWPIIVFDGDRLPIKMRTENDRHKRREISRAKGFEYLRAGQRDKAQDCFQTC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT +MA +I+ RA ++ IVAP+EADAQ+ YLN G +ITEDSDLLVFG K+
Sbjct: 123 VDVTPRMAHELIKELRANNIEYIVAPYEADAQLTYLNKIGDISAIITEDSDLLVFGCSKV 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK---- 179
I KLD GN + +E + + +M ++ KFR+MCILSGCDY +G+G+KK
Sbjct: 183 ILKLDHQGNGIEIRQEDIANIKEMRF--WSSDKFRHMCILSGCDYLESPQGIGIKKSIKL 240
Query: 180 -AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
AK ++ D +A+ KI + K+ + + F + F +Q VYDP
Sbjct: 241 LAKCEAATVSD----DAMYKIYSTSTTANSPKLPPNYYSRFMLADFAFQHQRVYDPQQGI 296
Query: 239 VVPLNPLESEMRDEVFSQLSL 259
+VPL P ++ E+ +LS+
Sbjct: 297 LVPLTPFPPDL--ELTEELSM 315
>gi|169622701|ref|XP_001804759.1| hypothetical protein SNOG_14577 [Phaeosphaeria nodorum SN15]
gi|160704833|gb|EAT78117.2| hypothetical protein SNOG_14577 [Phaeosphaeria nodorum SN15]
Length = 670
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML+ I ++FDG +LP+K TE+DRR++R K ELL + + ++A L
Sbjct: 76 MNRVRMLIHFGITPYIIFDGDNLPSKAGTEKDRRERRKEGKRLGLELLKVGKTAQAHLEL 135
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA I+ + + +VAP+EAD++MAYL G D V++EDSDLLVFG
Sbjct: 136 QKSVDVTPEMARMFIEELKHHNIQYVVAPYEADSEMAYLERKGIIDGVLSEDSDLLVFGV 195
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +I KLD G+C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 196 KCLITKLDKYGDCVEINRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 255
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ E ++ GK+ K+ F+ F F+YQ V+ P+ K++V
Sbjct: 256 HRMLRK--HKTVERLVKAAQFDGKL----KVPAGFMADFDQAEKTFMYQWVFCPIEKKLV 309
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
L PL + + + E+P A +A G+L P LP+T
Sbjct: 310 HLTPLADGID---IADMPFLGEEVPAHIAMGVARGDLYP-------------RTKLPMT- 352
Query: 301 IWSKQ--YEKPCDRHSSEESVSEPPVFQKLKPVAS 333
I SKQ KP S+ + P + KP+ S
Sbjct: 353 ITSKQKPMGKPLAPARRTSSIVQTPDSKGSKPIDS 387
>gi|336467245|gb|EGO55409.1| hypothetical protein NEUTE1DRAFT_147941 [Neurospora tetrasperma
FGSC 2508]
gi|350288128|gb|EGZ69364.1| hypothetical protein NEUTE2DRAFT_94431 [Neurospora tetrasperma FGSC
2509]
Length = 758
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 13/287 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG +LP+K TE DR +R+ + ELL + S+A L
Sbjct: 60 MHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRENRREVSRKTGLELLKAGKPSQAHIEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+T +MA ++I + V +VAP+EADAQ+ YL G +++EDSDLLVFGA
Sbjct: 120 QKAIDITPEMARHLIDELKKANVPYVVAPYEADAQLIYLERRGIISGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ K+D G C ++R + + ++ L ++DA+FR M I SGCDY + MGL+ A
Sbjct: 180 KRLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCDYLDSLPSMGLRTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + P E ++K+ GKI ++ ++L F L F+YQ V+ P + VV
Sbjct: 240 YRMIRKLKTP--ERIVKKLQFDGKI----RVPDDYLARFKQAELTFIYQRVFCPEKQAVV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ--AFQLALGNLDPFSLEEM 285
L DE + + + P D A +A+G+++P + E +
Sbjct: 294 CLT-----EPDESINVDDMPYIGAPIDAKLARAIAVGDVNPITKEPI 335
>gi|340966712|gb|EGS22219.1| 5'->3' double-stranded DNA exonuclease-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 743
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 160/286 (55%), Gaps = 11/286 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG LP+K TEE R+K+R+ K ELL + S A + L
Sbjct: 60 MHRVKMFRYFGVTPYIVFDGDFLPSKAKTEESRKKRREEAKKVGLELLRAGKPSLAFNEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA ++I+ + V +VAP+EADAQ+ YL G +++EDSDLLVFGA
Sbjct: 120 QKAIDVTPEMARHLIEELKKEDVPYVVAPYEADAQLVYLERKGIISGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD G C ++R+ ++ L +TD++FR+M I SGCDY G+ +GLK A
Sbjct: 180 KRLLTKLDQHGQCVEINRKDFCLVREISLTGWTDSEFRHMAIFSGCDYLEGLSNIGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ PD R + + G Y ++ + +L F L FL+Q V+ P K++V
Sbjct: 240 YRLIRKHKTPD-----RIVKMLRFDGKY-QVPQNYLEEFKQAELTFLHQRVFCPEKKDIV 293
Query: 241 PLN-PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L P S DE+ + E EL A +A+G+++P + + +
Sbjct: 294 FLTEPDPSLNIDEMPYIGAPIETEL----ARAIAVGDVNPITKQRI 335
>gi|398390271|ref|XP_003848596.1| hypothetical protein MYCGRDRAFT_63697, partial [Zymoseptoria
tritici IPO323]
gi|339468471|gb|EGP83572.1| hypothetical protein MYCGRDRAFT_63697 [Zymoseptoria tritici IPO323]
Length = 504
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 153/279 (54%), Gaps = 9/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + ML+ + +VFDG +LP+K TE++R +R K ELL + R S+A L
Sbjct: 60 LHRVRMLIHFGVTPYIVFDGDYLPSKSHTEKERAARRKESKRVGLELLRMGRTSQAHLEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAPFEAD+Q+AYL G V++EDSDLLVFG
Sbjct: 120 QKAVDVTPVMARELIEELKRMDVPYVVAPFEADSQLAYLEQQGKISGVLSEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G C ++R S + L + D +FR M +LSGCDY GI MGLK A
Sbjct: 180 KCLLTKLDQYGECIMVNRADFTSCRDISLVGWADKEFRIMAMLSGCDYLPGIDKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
YV E ++ + GK+ K+ +L +F N FL+Q V+ ++ ++
Sbjct: 240 YRYVRK--HKTVERIVQAVQFEGKM----KVPPGYLEAFLNAERTFLHQWVFCSDTRGLL 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L PL S + E + K ++ + A +A G+LDP
Sbjct: 294 NLTPLPSGVDAESMPYIG-KTVD--AELAAGVACGDLDP 329
>gi|85092799|ref|XP_959551.1| hypothetical protein NCU06089 [Neurospora crassa OR74A]
gi|28920991|gb|EAA30315.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 758
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 158/287 (55%), Gaps = 13/287 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG +LP+K TE DR +R++ + ELL + S+A L
Sbjct: 60 MHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRESRREASRKTGLELLKAGKPSQAHIEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+T +MA ++I + V +VAP+EADAQ+ YL G +++EDSDLLVFGA
Sbjct: 120 QKAIDITPEMARHLIDELKKANVPYVVAPYEADAQLIYLERRGIISGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ K+D G C ++R + + ++ L ++DA+FR M I SGCDY + MGL+ A
Sbjct: 180 KRLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCDYLDSLPSMGLRTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + P E ++K+ GKI ++ ++L F L F+YQ V+ P + VV
Sbjct: 240 YRMIRKLKTP--ERIVKKLQFDGKI----RVPADYLARFKQAELTFIYQRVFCPEKQAVV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQ--AFQLALGNLDPFSLEEM 285
L D+ + + + P D A +A+G+++P + E +
Sbjct: 294 CLT-----EPDKSINVDDMPYIGAPIDAKLARAIAVGDVNPITKEPI 335
>gi|145324070|ref|NP_001077624.1| exonuclease 1 [Arabidopsis thaliana]
gi|166232400|sp|Q8L6Z7.2|EXO1_ARATH RecName: Full=Exonuclease 1
gi|332192991|gb|AEE31112.1| exonuclease 1 [Arabidopsis thaliana]
Length = 735
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 11/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K IMVFDG LP K E R + R + A+A E S A
Sbjct: 60 MHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++VD++ +A +IQ R VD +VAP+EADAQMA+L I D +ITEDSDL+ FG
Sbjct: 120 SKAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 180 LRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ ++ + S V + + SF L F +Q VYDP +++++
Sbjct: 240 HALITKFK--SYDRVIKHLKY-----STVSVPPLYEESFKRALLTFKHQRVYDPNAEDII 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L ++ D + +P+D A +ALG LDPF+
Sbjct: 293 HL----CDISDNLGEDSDFVGPSMPQDIAKGIALGQLDPFT 329
>gi|403375999|gb|EJY87977.1| Exonuclease 1 [Oxytricha trifallax]
Length = 835
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 152/281 (54%), Gaps = 8/281 (2%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ MLL +K I++FDG L K TE +RR R + KA E + A +S
Sbjct: 63 LQMLLNAGVKPIIIFDGCRLIMKGNTENERRNNRLEARIKAEEYQREGNYAMAMRKFSES 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VD+T +MA IQ + ++ VAP+EADAQ+AY+ + G A +ITEDSDLL+FG KK+
Sbjct: 123 VDITPEMAFEFIQVLKQADIEYYVAPYEADAQLAYMYLKGKAQVIITEDSDLLIFGVKKV 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
++K+D +GN +D E L ++ KF CILSGCDY IKG+G KKA
Sbjct: 183 LFKMDKAGNGIEIDLENLNDVTELNFTKFNQDMLLTCCILSGCDYLESIKGIGFKKAHKL 242
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
V+ D + + L+++ GK+ I +++ +F L F +Q V+ P +++V L+
Sbjct: 243 VYDEGD-NVQGILKRVRREGKM----LIPQDYEKTFEKAFLTFKFQLVFCPDVEDLVYLH 297
Query: 244 PLESEMRDEV---FSQLSLKELELPKDQAFQLALGNLDPFS 281
+ + ++ L LPK+ A +A G++DP S
Sbjct: 298 DPDIHTAGPLLKNYANLDFLGKRLPKETAVAIAKGDIDPMS 338
>gi|407040925|gb|EKE40417.1| exonuclease, putative [Entamoeba nuttalli P19]
Length = 486
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 160/311 (51%), Gaps = 15/311 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++Y+ HKI I VFDG LP+K+ EE+R +R S + A + + EA
Sbjct: 60 LEYLKFFNTHKIIPIFVFDGATLPSKKGVEEERLNRRKSAYSNALKYEKEGKQIEALVCW 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q++D+T A VI A RGV CIVAP+EADAQMAYL+ GY D VI EDSD++ +G
Sbjct: 120 KQAIDITPFHASKVINAFHKRGVQCIVAPYEADAQMAYLSRTGYVDVVICEDSDMIPYGC 179
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLA-KFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+++KL++ N C + LP K P T + + CILSGCDY+ G+ G+GLK
Sbjct: 180 SVVLFKLNVVSNTCDVYQAQDLP---KTPFGINITLFQLQITCILSGCDYFQGVNGIGLK 236
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
KA V S ++++ + K ++ ++ F +Q +YD K
Sbjct: 237 KALKIVGSC------KTIKQVILSLKKNYNKQLPNNLEEQLNDALFTFNHQYIYDIEEKT 290
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPV 298
++PL E E+ + K+L+ + Q+A G +DP +LE D + P+
Sbjct: 291 IIPLTDFEGNETTELIERTLGKKLD--QGSVIQIAEGKIDPNTLEPFKNNEIDIFDLEPI 348
Query: 299 TSIWSKQYEKP 309
I KQ++ P
Sbjct: 349 PEI--KQFQTP 357
>gi|451855203|gb|EMD68495.1| hypothetical protein COCSADRAFT_33392 [Cochliobolus sativus ND90Pr]
Length = 725
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML+ + +VFDG +LP+K TE+ RR++R K ELL + + ++AQ L
Sbjct: 60 MHRVRMLIHFGVTPYLVFDGDNLPSKAGTEKGRRERRKESKRLGLELLKVGKVAQAQQEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA VI+ + + +VAP+EAD+Q+AYL G + V++EDSDLLVFG
Sbjct: 120 QKSVDVTPEMARMVIEELKKNNIQYVVAPYEADSQLAYLERKGIINGVLSEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K +I KLD G C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 180 KCLITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + ++ + +K+ F+ SF FLYQ VY V +++V
Sbjct: 240 HRMLRK------HKTVDRLVKAAQFDGKLKVPAGFMESFDQAEKTFLYQWVYCTVEEKLV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L PL + + + E+P A +ALG+L P S
Sbjct: 294 NLTPLGDGVN---IADMPYIGEEVPPHLAKGVALGDLYPRS 331
>gi|388854492|emb|CCF51879.1| related to EXO1-exonuclease which interacts with Msh2p [Ustilago
hordei]
Length = 814
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 25/292 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML IK +VFDG LPAK TE+D KR + A+A +L EA+ +L
Sbjct: 60 LSRIGMLQHFGIKPYLVFDGDKLPAKTHTEDDE-SKRSENLARAQQL-------EAEGNL 111
Query: 61 RQS-------VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
+Q+ VD+T +MA +I+ + + + +VAP+EADAQ+AYL G D V+ EDS
Sbjct: 112 QQARDLYAKCVDITPEMAYQLIKVLKEQAIPYLVAPYEADAQLAYLEKCGAIDAVLMEDS 171
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
DLLVFG +++KLD +GN + +E+ + ++ L+ +T +FR M ILSGCDY I
Sbjct: 172 DLLVFGCNTVLFKLDQAGNAVEIKQERF-TNRQIALSGWTAVEFRQMAILSGCDYLPSIV 230
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
GMGLK A + D L+ + + GK+ I + + F L F++Q V+D
Sbjct: 231 GMGLKNAHRLLRRHKTVD--KVLQVVRLEGKM----SIPPTYPSEFRKAELTFVHQRVFD 284
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
P S +VV L PL S D++ L + + A +A G +DP + E +
Sbjct: 285 PSSSKVVTLTPLPSGTHDDM---LPFIGAHIEDEMARAIADGIVDPITRERI 333
>gi|260803225|ref|XP_002596491.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
gi|229281748|gb|EEN52503.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
Length = 698
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 126/207 (60%), Gaps = 2/207 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL+H IK ++VFDG +LP+K+ E+ RR+++ + K + L ++A+
Sbjct: 60 LKYVNMLLSHGIKPVIVFDGCNLPSKQGVEDSRRERKQLYLQKGKQFLRDGNTAQARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ ++VT +MA V++ACR GVDCIVAP+EADAQ+AYLN G A VITEDSDLL FG
Sbjct: 120 QKCINVTPQMAHEVMEACRTLGVDCIVAPYEADAQLAYLNKCGIAQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++I+KLDL+GN +++ +L LK+ FT KFR + + +K
Sbjct: 180 DRVIFKLDLNGNGTMIEKHRLSQCLKIKAQNFTFDKFR--SDKKEPSRSVDVDTINDEKE 237
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGS 207
+D +P + L+ GKIGS
Sbjct: 238 EDLSLEPTEPSWRKELQSFQRQGKIGS 264
>gi|268575672|ref|XP_002642815.1| Hypothetical protein CBG21211 [Caenorhabditis briggsae]
Length = 646
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 165/332 (49%), Gaps = 31/332 (9%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
KYI LL + V+MVFDGR LPAK++T +DRR+ R+ K A LL + EA+ H R
Sbjct: 61 KYIQELLGMECHVVMVFDGRPLPAKKSTNDDRREMREKRKEHAEMLLAKGKEREARDHYR 120
Query: 62 QSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ ++ ++ I R R VD +VAP+EADAQ+AYL + D V+TEDSDL+VFG
Sbjct: 121 LATTISAEIVEKTIVFFRKIRNVDVVVAPYEADAQLAYLMQSKLVDAVVTEDSDLIVFGC 180
Query: 121 KKIIYKL-DLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDYW-TGIKGMG 176
+ I +K ++G+C + L L KF KFR +CIL+GCDY +G+ G+G
Sbjct: 181 ETIYFKWQSVTGDCSVYQKSDLKKCFSGELGGEKFDFVKFRRICILAGCDYLQSGLPGVG 240
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVK-ITKEFLTSFHNTNLMFLYQPVYDPV 235
L A + D LRKI Y K + + +EF+ F F +Q V+DP
Sbjct: 241 LATAVKFFSLTSIKDLRILLRKIPSYLKNPKLKEHVNEEFIRGFERAENTFKHQIVFDPR 300
Query: 236 SKEVVPLNP---------LE-------SEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
+ PL P LE +E + E+ ++ + + +LALGN
Sbjct: 301 ERCQKPLTPYPAMDIDDELEILDFESPAESKSEISTKFEYAGTAETQRSSIRLALGNPSN 360
Query: 280 FSLEEMDQW----NPDSEENLPVTSIWSKQYE 307
S +D P +P SIW +YE
Sbjct: 361 NSKNSIDDRFLLIQP-----IPEWSIWGLRYE 387
>gi|302678719|ref|XP_003029042.1| hypothetical protein SCHCODRAFT_17178 [Schizophyllum commune H4-8]
gi|300102731|gb|EFI94139.1| hypothetical protein SCHCODRAFT_17178 [Schizophyllum commune H4-8]
Length = 316
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 143/257 (55%), Gaps = 12/257 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + ++ +VFDG LPAK+ TE +RR+KR+ A+A L + S+A+ H
Sbjct: 60 MHRVRMLRHNGVEPYIVFDGGPLPAKKGTENERRQKREESLARANMLAAQGKHSQARDHY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA VI+A R V +VAP+EADAQMA+L G ++TEDSDLLVFG
Sbjct: 120 LKCVDVTPEMAYQVIKALRVENVKYVVAPYEADAQMAFLERTGAVHAILTEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFM-----DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
K +++KLD C + D + + + L +TDA+FR M ILSGCDY I G+
Sbjct: 180 KNVLFKLD-HAQCTVVSISRSDFASVTACDGVSLVGWTDAQFRTMAILSGCDYLPSIPGI 238
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GLK A YV E ++ I GK +I +++ F FL+Q VYDP
Sbjct: 239 GLKTAAVYVRK--HKTAEQCVKAIAREGK----KRIPMGYVSQFKLAEQCFLHQRVYDPA 292
Query: 236 SKEVVPLNPLESEMRDE 252
+ +V L + + +E
Sbjct: 293 REALVHLTDVGDDWTEE 309
>gi|301103478|ref|XP_002900825.1| exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262101580|gb|EEY59632.1| exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 401
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 162/334 (48%), Gaps = 18/334 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I LL + + +VFDG LP K+ TEE+RRK R ++ + R EA+
Sbjct: 60 MDRITALLHNGVTPYVVFDGGPLPMKKGTEEERRKSRQKNRELGVQHYNNKRFGEARKCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ DV+ MA VIQ +A+ V +VAP+EADAQ+AYL G AD VITEDSD L FG
Sbjct: 120 VRAADVSPYMAHRVIQHLKAQNVAYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +++K+D + L M FT+ F MCI SGCDY I G GLKKA
Sbjct: 180 QTVLFKMDRDNIAQEIQTANLKKNKGMSFHMFTEQMFLEMCIFSGCDYLPSIPGFGLKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y F +R + + GK V+I + F L F +Q VY P KE+V
Sbjct: 240 --YTAMKQHGSFAKIVRALRLEGK----VRIPATYEEDFRKAVLTFRHQRVYCPTKKELV 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLP-VT 299
PL P+ + + + + L D A +A G++DP ++ P S P VT
Sbjct: 294 PLTPVPANLL-KTDPAMDFVGPMLSSDVAKAIAEGDMDPITMTPFPVKAPVSRSIQPKVT 352
Query: 300 SIWSKQYEKPCDRHSSEESVSEPPVFQKLKPVAS 333
S + H+SE + + + KP +S
Sbjct: 353 SFF----------HASESAAAAVFNAPRTKPTSS 376
>gi|390599160|gb|EIN08557.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 317
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 142/246 (57%), Gaps = 9/246 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L + I +VFDG LPAK+ TE +R K+R+ + AK +L R S+A+ +
Sbjct: 60 MGRVRLLRHYGITPYLVFDGGPLPAKKRTEVERAKRREENLAKGKQLAAQGRHSQAREYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA +I+A +A V +VAP+EADAQ+AYL G ++TEDSDLLVFG
Sbjct: 120 VKCIDVTPQMAYQLIKALKAENVPYVVAPYEADAQLAYLERTGAVSAILTEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKLP--SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+ +++KLD +S + R S+ + L ++D +FR M ILSGCDY I G+GL
Sbjct: 180 RHVLFKLDHVSATVSAVSRSDFGSLSSSDITLLGWSDVQFRAMAILSGCDYLPSIPGVGL 239
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
K A + + ENA+R + + GK + +L +F +FL+Q VYDP
Sbjct: 240 KTA--WALLRKHKNVENAVRALRLEGK----KPVPDGYLDAFRLAEKVFLHQRVYDPAQA 293
Query: 238 EVVPLN 243
+V LN
Sbjct: 294 RLVHLN 299
>gi|388582387|gb|EIM22692.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 649
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 161/300 (53%), Gaps = 39/300 (13%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I +++ K+K +VFDG L AK+ TE +R + R + A +L + ++A+ +
Sbjct: 80 IKAMISIKVKPFVVFDGGPLGAKQHTETNRDESRAKNLEIALKLESQGKKTQARQAFSKC 139
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VD+T +MA +I+ + VD IVAP+EADAQM +L G D +ITEDSDLLVFGAKK+
Sbjct: 140 VDITPRMAYELIKVLLSLKVDYIVAPYEADAQMYHLERLGIVDGIITEDSDLLVFGAKKV 199
Query: 124 IYKLDLSGNCCFMDREKLP----SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
I+KL G+C + R++ + K+TD FR M +LSGCDY + G+GLKK
Sbjct: 200 IFKLRQDGSCDEVSRDRFGLVRIDGKALCSGKWTDVHFRRMAMLSGCDYLKSLPGVGLKK 259
Query: 180 AKDYV----------FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
A D V F ++EN +R K+ +E+ F +L FL+Q
Sbjct: 260 AFDAVRRGGETFDMIFIYFTHNYENKVR------------KVPEEYKFKFKLADLAFLHQ 307
Query: 230 PVYDPVSKEVVPLNPL------ESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
++ P+ + + PLNPL E+ D + S ++P + A +A+G++ P S E
Sbjct: 308 RIWCPIERRIKPLNPLPDDLIGNEEINDWIGS-------DMPDELAEGIAMGDVCPVSKE 360
>gi|452838210|gb|EME40151.1| hypothetical protein DOTSEDRAFT_158847, partial [Dothistroma
septosporum NZE10]
Length = 687
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 153/279 (54%), Gaps = 9/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ + ML+ +K +VFDG +LP+K TE +R +R K ELL + R S+A L
Sbjct: 60 LHRVRMLIHFGVKPYIVFDGDYLPSKAHTESERAARRKESKRMGLELLRMGRPSQAHLEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VDVT MA +I+ + V +VAP+EAD+Q+AYL G D VI+EDSDLLVFG
Sbjct: 120 QKAVDVTPVMARELIEELKRLEVPYVVAPYEADSQLAYLEKQGMIDGVISEDSDLLVFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K ++ KLD G C ++R S ++ L ++D +FR M +LSGCDY GI MGLK A
Sbjct: 180 KCLLTKLDQYGECVMINRADFTSCREVSLVGWSDKEFRMMAMLSGCDYLPGIDKMGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
Y + +R + GK+ K+ +L +F F++Q V+ P ++ ++
Sbjct: 240 --YRLVRKHKTVDRVVRTVQFDGKM----KVPAGYLEAFQKAERTFMHQWVFCPQAQCLL 293
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L+ L + E S + E P A +A G+LDP
Sbjct: 294 NLDALPEGL--EAASIPYIGEHVNP-GLAAGVARGDLDP 329
>gi|336375373|gb|EGO03709.1| hypothetical protein SERLA73DRAFT_101960 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388429|gb|EGO29573.1| hypothetical protein SERLADRAFT_445364 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 147/247 (59%), Gaps = 11/247 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L HKI+ +VFDG LPAK+ TE +R+++RD + AKA L + + ++A+ +
Sbjct: 60 MHRVRLLRHHKIQPYIVFDGGPLPAKKGTEAERKQRRDENLAKANALAVQGKHTQAREYY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A RA GV +VAP+EADAQMAYL G D +ITEDSDLLVFG
Sbjct: 120 VKCVDVTPQMAFQLIKALRAEGVPYVVAPYEADAQMAYLERIGLVDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKLPSALK----MPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
+ +++KLD +S + R S + L ++D++FR M ILSGCDY I G+
Sbjct: 180 RNVLFKLDSVSSTITSISRADFGSVTATEGGISLHGWSDSQFRAMAILSGCDYLPSIPGV 239
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GLK A + D +R + + GK + + +L ++ +FL+Q VY P+
Sbjct: 240 GLKTAWTLLRKHKTAD--QVIRALRLEGKKA----VPRGYLEAYKLAEKVFLHQRVYCPL 293
Query: 236 SKEVVPL 242
+++V L
Sbjct: 294 DEKLVSL 300
>gi|403214255|emb|CCK68756.1| hypothetical protein KNAG_0B03150 [Kazachstania naganishii CBS
8797]
Length = 719
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 135/248 (54%), Gaps = 11/248 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K ML I+ +VFDG ++P K+ TE RR+KR KA A L S A
Sbjct: 60 IKRFAMLKTFNIRPFLVFDGANIPVKKDTETKRREKRVESKAIAERLWKSGEKSNAMDFF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA VI CR + IVAP+EAD+QM YL G D +++EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCVIDYCRNNALAYIVAPYEADSQMVYLEKMGMVDGILSEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
KK+I KL+ G C +D +KLP K PL + + A FR + LSGCDY GI +G+
Sbjct: 180 KKLITKLNDYGECIEIDSADFKKLPR--KFPLGQLSQANFRTLVCLSGCDYTNGIAKVGI 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V + E L +I GK+ + FL + N F +Q V+ P+S
Sbjct: 238 LTAMKLVQRLN--SMEKILLQIQREGKLS----VPSNFLDEYELANYAFQFQRVFCPMSG 291
Query: 238 EVVPLNPL 245
++VPLN +
Sbjct: 292 KIVPLNEI 299
>gi|320580512|gb|EFW94734.1| exodeoxyribonuclease 1 [Ogataea parapolymorpha DL-1]
Length = 1767
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 163/283 (57%), Gaps = 14/283 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+ + M + I MV DG +LP K TE++R +R +K E L ++ SEA ++
Sbjct: 61 RRLDMSAHYGITPYMVLDGDYLPTKANTEKEREGRRKEYKRLGLEALRANKRSEAYNYFN 120
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ D+T ++A +VI+A ++R + +VAP+EADAQM YL G +I+EDSDLL+FG +
Sbjct: 121 KACDITPQIAKSVIEALKSRNIQYVVAPYEADAQMVYLEKHGIVQGIISEDSDLLIFGCQ 180
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
++I KLD SG C + R+K + + F++ + + M I+SGCDY GI +G+++A
Sbjct: 181 RLITKLDDSGACIEVRRDKFKDCRESAIGLFSNEQLKLMAIVSGCDYTKGIPNVGMQRAI 240
Query: 182 DYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
+ V +S + L+ + GK+ K+ EF T ++ F +Q V+DP +++
Sbjct: 241 NLVNRYSTIG----RLLQAVRYEGKL----KVPVEFETEYYRAITAFNHQVVFDPRTQKP 292
Query: 240 VPLNPLESEMRDEVFSQLSLKELELPKDQAFQ-LALGNLDPFS 281
V LNPL E D++ ++ ++ D+ + +A+G LDP +
Sbjct: 293 VHLNPLSPE--DDIL-EVERCAGKIHDDELHRKIAIGELDPIT 332
>gi|302915703|ref|XP_003051662.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732601|gb|EEU45949.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 743
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 145/246 (58%), Gaps = 7/246 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + MVFDG +LP+K ATE+ R KKRD K A ELL + ++A
Sbjct: 60 MMRVRMLRHFGVTPYMVFDGDYLPSKAATEDSRAKKRDDKKKVAMELLRAGKPAQATQEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ +D+T +MA +IQ + + +VAP+EADAQ+ YL G +I++DSDLLVFGA
Sbjct: 120 QKCIDITPEMASALIQQLKKLDIPYVVAPYEADAQLVYLERQGLIHGIISDDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++ KLD GNC ++R+ + ++ L ++D +FR M ILSGCDY G+ +GLK A
Sbjct: 180 KKLLTKLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAILSGCDYLDGLPSVGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E +R + GK +I++ +LT F+ L FL+Q V+ P K++V
Sbjct: 240 YRMLRKTKAP--ERVVRMLQFQGK-----RISENYLTQFYQAELTFLHQWVFCPNKKQLV 292
Query: 241 PLNPLE 246
L L+
Sbjct: 293 HLTDLD 298
>gi|67480609|ref|XP_655654.1| exonuclease I [Entamoeba histolytica HM-1:IMSS]
gi|56472812|gb|EAL50271.1| exonuclease I, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702067|gb|EMD42771.1| exonuclease I, putative [Entamoeba histolytica KU27]
Length = 486
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 149/285 (52%), Gaps = 13/285 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++Y+ HKI I VFDG LP+K+ EE+R +R S + A + + EA
Sbjct: 60 LEYLKFFNTHKIIPIFVFDGATLPSKKGVEEERLNRRKSAYSNALKYEKEGKQIEALVCW 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q++D+T A VI A RGV CIVAP+EADAQMAYL+ GY D VI EDSD++ +G
Sbjct: 120 KQAIDITPFHASKVINAFHKRGVQCIVAPYEADAQMAYLSRTGYVDVVICEDSDMIPYGC 179
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLA-KFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+++KL++ N C + LP K P T + + CILSGCDY+ G+ G+GLK
Sbjct: 180 SVVLFKLNVVSNTCDVYQAQDLP---KTPFGINITLFQLQITCILSGCDYFQGVNGIGLK 236
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
KA V S ++++ + K + ++ F +Q +YD K
Sbjct: 237 KALKIVGSC------KTIKQVILSLKKNYNKPLPNNLEEQLNDALFTFNHQYIYDIEEKT 290
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
++PL E E+ + K+L+ + Q+A G +DP +LE
Sbjct: 291 IIPLTDFEGNETTELIERTLGKKLD--QGSVIQIAEGKIDPNTLE 333
>gi|409048552|gb|EKM58030.1| hypothetical protein PHACADRAFT_90326 [Phanerochaete carnosa
HHB-10118-sp]
Length = 320
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 144/253 (56%), Gaps = 16/253 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L + I +VFDG L AK+ TE DR+KKR+ + A+A L + ++A+ +
Sbjct: 60 MHRVRLLKHYNIIPYIVFDGGPLSAKKGTESDRKKKREENLARANSLAAQGKHTQAREYY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA I+A RA V +VAP+EADAQMAYL G D ++TEDSDLLVFG
Sbjct: 120 VKCIDVTPQMAFQFIKALRAENVAYVVAPYEADAQMAYLERIGLVDGILTEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKLP-----SALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
K ++ KLD + + R+ S + L ++D +FR M ILSGCDY I
Sbjct: 180 KSVLLKLDTVESTVISISRQDFASLTASSGGGISLLGWSDVQFRAMAILSGCDYLPSIPS 239
Query: 175 MGLKKAKDYVFSIMDPD--FENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
+GLK A +S++ EN +R + + GK I + +L +F +FL+Q VY
Sbjct: 240 VGLKTA----WSLLRKHGCVENVIRALRIEGK----KSIPQGYLQAFRLAEKVFLHQRVY 291
Query: 233 DPVSKEVVPLNPL 245
DP+ +V L+PL
Sbjct: 292 DPLKDMLVHLSPL 304
>gi|366995107|ref|XP_003677317.1| hypothetical protein NCAS_0G00770 [Naumovozyma castellii CBS 4309]
gi|342303186|emb|CCC70964.1| hypothetical protein NCAS_0G00770 [Naumovozyma castellii CBS 4309]
Length = 709
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 150/301 (49%), Gaps = 29/301 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K ML I+ +VFDG +P K+ TE RR++R ++A A L A +
Sbjct: 60 IKKFSMLRKFNIEPYLVFDGDSIPVKKGTELKRRERRVENRAIAERLWTSGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T MA VI C+ ++ IVAPFEAD+QM YL G +I+EDSDLLVFG
Sbjct: 120 QKCVDITPDMAKCVIDYCKVNQINYIVAPFEADSQMVYLEQTGIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C C D KLP K PL + FR + LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECIEICKDDFNKLPR--KFPLGQLNMECFRTLVCLSGCDYTDGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V+ + + D L I GK+ KI F + N F YQ V+ P+S+
Sbjct: 238 VTAMKMVYKLRNMD--RILLSIQRDGKL----KIPTTFKDEYKLANYAFQYQRVFCPISR 291
Query: 238 EVVPLNPLESEM------------------RDEVFSQLSLKELELPKDQAFQLALGNLDP 279
+VPLN + E RD Q + + ++ + ++A G+L+P
Sbjct: 292 RIVPLNKIPEEKFTADDLIILSQCIGNVIHRDSQVKQCVINDEDIDHELHARIANGDLNP 351
Query: 280 F 280
+
Sbjct: 352 Y 352
>gi|308461453|ref|XP_003093019.1| CRE-EXO-1 protein [Caenorhabditis remanei]
gi|308251938|gb|EFO95890.1| CRE-EXO-1 protein [Caenorhabditis remanei]
Length = 637
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 138/249 (55%), Gaps = 6/249 (2%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
KY+ LLA V+MVFDGR LPAK+ T +DRR++R+ K +A LL + EA+ R
Sbjct: 61 KYVKELLAMGCHVVMVFDGRPLPAKKGTNDDRREQREKRKEQAEMLLAKGKEREARDTYR 120
Query: 62 QSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ ++ ++ I+ R VD +VAP+EADAQ+AYL + D VITEDSDL+VFG
Sbjct: 121 LATSISTEIVEKTIEFFRKIPNVDIVVAPYEADAQLAYLMESKLVDAVITEDSDLIVFGC 180
Query: 121 KKIIYKL-DLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDYW-TGIKGMG 176
+ I +K +G C ++ L L KF +KFR +CILSGCDY +G+ G+G
Sbjct: 181 EMIYFKWQSATGECSVYEKCNLKKCFTGELGGDKFDFSKFRRICILSGCDYLQSGLPGVG 240
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVK-ITKEFLTSFHNTNLMFLYQPVYDPV 235
L A + D LRK+ Y K + +T+EF+ SF F +Q V+DP
Sbjct: 241 LSTAAKFFSLTSIKDLRTVLRKVPSYLKNPKLKEHVTEEFIRSFARAENTFKHQIVFDPR 300
Query: 236 SKEVVPLNP 244
+ PL P
Sbjct: 301 ERCHKPLTP 309
>gi|19112842|ref|NP_596050.1| exonuclease I Exo1 [Schizosaccharomyces pombe 972h-]
gi|1706728|sp|P53695.1|EXO1_SCHPO RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I
gi|703466|gb|AAC41648.1| exonuclease [Schizosaccharomyces pombe]
gi|4007793|emb|CAA22433.1| exonuclease I Exo1 [Schizosaccharomyces pombe]
Length = 571
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 146/257 (56%), Gaps = 19/257 (7%)
Query: 1 MKY-IH---MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA 56
+KY IH ML + +K ++VFDG LP K +TE+ R+++R +L + S+A
Sbjct: 56 LKYAIHQALMLQYYGVKPLIVFDGGPLPCKASTEQKRKERRQEAFELGKKLWDEGKKSQA 115
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
+ VDVT +MA +I A R G++ IVAP+EADAQ+ YL D +ITEDSD+L
Sbjct: 116 IMQFSRCVDVTPEMAWKLIIALREHGIESIVAPYEADAQLVYLEKENIIDGIITEDSDML 175
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSA----LKMPLAKFTDAKFRYMCILSGCDYWTGI 172
VFGA+ +++K+D GNC + R + +A L++P+ K R+M I SGCDY G+
Sbjct: 176 VFGAQTVLFKMDGFGNCITIRRNDIANAQDLNLRLPI-----EKLRHMAIFSGCDYTDGV 230
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
GMGLK A Y+ +P A+R + ++ +K+ F F +L F +Q VY
Sbjct: 231 AGMGLKTALRYLQKYPEP--RAAIRAM----RLDKSLKVPVSFEKEFALADLAFRHQRVY 284
Query: 233 DPVSKEVVPLNPLESEM 249
P K +V L+P E E+
Sbjct: 285 CPKDKTLVHLSPPEREL 301
>gi|116203679|ref|XP_001227650.1| hypothetical protein CHGG_09723 [Chaetomium globosum CBS 148.51]
gi|88175851|gb|EAQ83319.1| hypothetical protein CHGG_09723 [Chaetomium globosum CBS 148.51]
Length = 1331
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 158/286 (55%), Gaps = 11/286 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + +VFDG LP+K TE R K+R+ + ELL + S+A L
Sbjct: 60 MHRVRMFKYFGVTPYLVFDGDFLPSKAKTEASRSKRREETRKAGLELLKAGKPSQAYVEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA ++I+ + V +VAP+EADAQM YL G +++EDSDLLVFGA
Sbjct: 120 QKAIDVTPEMARHLIEELKKADVPYVVAPYEADAQMVYLERQGLISGIVSEDSDLLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ K+D G+C ++R + ++ L +TD +FR+M I SGCDY G+ +GLK A
Sbjct: 180 KRLLTKMDQHGHCIEINRRDFCAVREISLTGWTDNEFRHMAIFSGCDYLDGVNNIGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E ++ + GK +I + +L F L FL+Q V+ P +++V
Sbjct: 240 YRLIRKHKTP--ERIVKMLRFDGKH----QIPETYLQDFKQAELTFLHQRVFCPKKRDIV 293
Query: 241 PL-NPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
L +P S D++ + E E+ A +A G+++P + + +
Sbjct: 294 LLTDPEPSVNVDDMPFIGAPVETEM----ARSIAAGDVNPITKQRI 335
>gi|254580281|ref|XP_002496126.1| ZYRO0C11110p [Zygosaccharomyces rouxii]
gi|238939017|emb|CAR27193.1| ZYRO0C11110p [Zygosaccharomyces rouxii]
Length = 610
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 26/300 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ML + KI+ +VFDG + K+ TE RR+KR+ +A A L A +
Sbjct: 60 IKKLAMLRSFKIQPYLVFDGDGIGVKKETESKRREKREESRAVAKRLWESGERRNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ DVT +MA VI C+A+ + +VAPFEADAQM YL G+ +++EDSDLL+FG
Sbjct: 120 QKCADVTPEMAKCVIDYCKAQNIPYVVAPFEADAQMVYLEKNGFIQGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C C D KLP K L K T + R M L+GCDY +GI +GL
Sbjct: 180 RRLITKLNDFGECIEICRDDFCKLP--YKFALNKLTPQEIRTMVCLAGCDYTSGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V E L + GK+ K+ EF++ + N F YQ V+ PV +
Sbjct: 238 VTAMKLVQRFR--TLERILLHVQREGKL----KVPPEFISEYELANFAFQYQRVFCPVKR 291
Query: 238 EVVPLNPLESEM---------------RDEVFSQLSLKELELPKDQAFQLALGNLDPFSL 282
++V LN + ++ R+ Q + + E+ ++ +A+G L+P++
Sbjct: 292 KIVTLNEIPQDLLECEKLYQCIGNVIHRETEVKQCVVNDHEIHHEKHTLVAMGELNPYNF 351
>gi|297845884|ref|XP_002890823.1| hypothetical protein ARALYDRAFT_473168 [Arabidopsis lyrata subsp.
lyrata]
gi|297336665|gb|EFH67082.1| hypothetical protein ARALYDRAFT_473168 [Arabidopsis lyrata subsp.
lyrata]
Length = 744
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 147/285 (51%), Gaps = 11/285 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K IMVFDG LP K E R + R + A+A E S A
Sbjct: 60 MHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++VD++ +A +IQ R VD +VAP+EADAQM +L I D +ITEDSDL+ FG
Sbjct: 120 SKAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMTFLAITKQVDAIITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ ++ + S V + + SF L F +Q VYDP +++++
Sbjct: 240 HALITKFK--SYDRVIKHLKY-----STVSVPPLYEESFKRALLTFKHQRVYDPNTEDII 292
Query: 241 PLNPLESEM-RDEVFSQLS---LKELELPKDQAFQLALGNLDPFS 281
L+ + + D F L +P+ A +ALG LDPF+
Sbjct: 293 HLSDISDYLGEDSDFENLIDFLTSFTSMPQHIAKGIALGQLDPFT 337
>gi|66802930|ref|XP_635308.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
discoideum AX4]
gi|74851348|sp|Q54ED2.1|EXO1_DICDI RecName: Full=Exonuclease 1
gi|60463584|gb|EAL61769.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1046
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 141/249 (56%), Gaps = 19/249 (7%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML+++K+ +++FDG LP K+ E++R + R+ +K KA L+ S+A +++
Sbjct: 63 IKMLISYKVIPVVIFDGGPLPNKKLKEQERLRHREEYKNKAKAYLLEGNKSQANICFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VD+T +MA +I+ RA V+ +VAP+EADAQ+ YL+I G D +ITEDSDL+ FGA I
Sbjct: 123 VDITPRMAFLLIKELRALKVEYLVAPYEADAQLTYLSITGQVDAIITEDSDLVAFGATHI 182
Query: 124 IYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
I+K+D G + E L S K F R MCILSGCDY + GMGLK +
Sbjct: 183 IFKMDKYGYAQEIKTEDLGSCKKDGYDFIDFNQTMLRQMCILSGCDYLPSLSGMGLKTS- 241
Query: 182 DYVFSIMDPDFENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYDPVS 236
F + L++ K+ Y+K ++E+ F+ + F +Q V+DPVS
Sbjct: 242 ---FKL--------LKQHRDIEKVFKYLKREKSNFSQEYEQQFYKADFTFKHQRVFDPVS 290
Query: 237 KEVVPLNPL 245
+ + L PL
Sbjct: 291 RILTTLLPL 299
>gi|339239601|ref|XP_003381355.1| putative translation initiation factor IF-2 [Trichinella spiralis]
gi|316975619|gb|EFV59029.1| putative translation initiation factor IF-2 [Trichinella spiralis]
Length = 1569
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 153/286 (53%), Gaps = 22/286 (7%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K+I +LL++ I+VIMVFDGR++PAK+ T R+++R S K K L + EA+ +
Sbjct: 374 KWIKVLLSYNIRVIMVFDGRNVPAKKDTNNARKERRQSLKEKGQALSKSGKHREARQCFQ 433
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
Q+ ++T M I VD +VAP+EADAQ+AYL G A VI+EDSDL+ FG
Sbjct: 434 QATEITFDM----IAIKSIPNVDYLVAPYEADAQLAYLAQNGIAHLVISEDSDLIPFGCS 489
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
K+++K+D+ GN ++EKL A+ +P CDY + G+G+KK+
Sbjct: 490 KVLFKMDMLGNGVLYEKEKLHLAMNVP--------------EESCDYLENLPGIGIKKSI 535
Query: 182 DYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVP 241
+ D D AL KI Y + + +++ + ++ F FLYQ V+DP K++V
Sbjct: 536 KFFQKAFDVDIRKALPKIPSYLNMPN-LEVNESYIERFIEAENAFLYQLVFDPRKKQLVS 594
Query: 242 LNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQ 287
LN M F L K A Q+A G ++P +L+ + +
Sbjct: 595 LNAYPVGMNASDFPYAGLV---FEKHVAIQIARGMINPHTLQHVSE 637
>gi|302789395|ref|XP_002976466.1| hypothetical protein SELMODRAFT_175620 [Selaginella moellendorffii]
gi|302824817|ref|XP_002994048.1| hypothetical protein SELMODRAFT_138122 [Selaginella moellendorffii]
gi|300138102|gb|EFJ04882.1| hypothetical protein SELMODRAFT_138122 [Selaginella moellendorffii]
gi|300156096|gb|EFJ22726.1| hypothetical protein SELMODRAFT_175620 [Selaginella moellendorffii]
Length = 401
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 144/278 (51%), Gaps = 15/278 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H IK ++VFDG LP K EE R + R+ H A E + A H
Sbjct: 60 MHRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +I R V+ IV+P+EADAQMA+L + G D VITEDSDL+ +G
Sbjct: 120 QKAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KI++K+D +G + L + L FT MCILSGCDY ++GMG+K+A
Sbjct: 180 PKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLPSLQGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + +E +R + G V I K + F L F + VYDP E+V
Sbjct: 240 HNLIRRFR--SYEKVIRHLKFSG-----VMIPKSYEEGFRKALLTFCHHLVYDPTQDELV 292
Query: 241 PLNPLESEMRDEV-------FSQLSLKELELPKD-QAF 270
L L ++ +EV F L + EL D Q+F
Sbjct: 293 HLTELPADCSEEVEFLGPYPFKSLCILHSELNSDKQSF 330
>gi|409076372|gb|EKM76744.1| hypothetical protein AGABI1DRAFT_78182 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 320
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 14/260 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L + ++ +VFDG LPAK TE +R+K+RD + A+ L+ R S+A+
Sbjct: 60 MHRVRLLRHYGVEPYVVFDGGPLPAKRGTESERKKRRDENLARGKALVAQGRHSQARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA +I+A R V IVAP+EADAQ+AYL G ++TEDSDLLVFG
Sbjct: 120 IKCIDVTPEMAYQLIKALRPENVQYIVAPYEADAQLAYLERKGLVSAILTEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKLPSAL-------KMPLAKFTDAKFRYMCILSGCDYWTGI 172
K +++KLD ++ C + R S + L + D +FR M ILSGCDY I
Sbjct: 180 KNVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWNDTQFRAMAILSGCDYLPSI 239
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
G+GLK A + + E +R + + GK + +L ++ + F +Q VY
Sbjct: 240 PGIGLKTANNLMRKWKTA--EAVIRAVTLEGK----KNVPNGYLQQYNLADRCFRFQRVY 293
Query: 233 DPVSKEVVPLNPLESEMRDE 252
DP+ ++V L+ + E +E
Sbjct: 294 DPLEGKLVHLHDVAGEWDEE 313
>gi|426195183|gb|EKV45113.1| hypothetical protein AGABI2DRAFT_207951 [Agaricus bisporus var.
bisporus H97]
Length = 320
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 14/260 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L + ++ +VFDG LPAK TE +R+K+RD + A+ L+ R S+A+
Sbjct: 60 MHRVRLLRHYGVEPYVVFDGGPLPAKRGTESERKKRRDENLARGKALVAQGRHSQARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +DVT +MA +I+A R V IVAP+EADAQ+AYL G ++TEDSDLLVFG
Sbjct: 120 IKCIDVTPEMAYQLIKALRPENVQYIVAPYEADAQLAYLERKGLVSAILTEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKLPSAL-------KMPLAKFTDAKFRYMCILSGCDYWTGI 172
K +++KLD ++ C + R S + L + D +FR M ILSGCDY I
Sbjct: 180 KNVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWNDTQFRAMAILSGCDYLPSI 239
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
G+GLK A + + E +R + + GK + +L ++ + F +Q VY
Sbjct: 240 PGIGLKTANNLMRKWKTA--EAVIRAVTLEGK----KNVPNGYLQQYNLADRCFRFQRVY 293
Query: 233 DPVSKEVVPLNPLESEMRDE 252
DP+ ++V L+ + E +E
Sbjct: 294 DPLEGKLVHLHDVAGEWDEE 313
>gi|341889727|gb|EGT45662.1| hypothetical protein CAEBREN_02863 [Caenorhabditis brenneri]
Length = 663
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 145/272 (53%), Gaps = 6/272 (2%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+Y+ LL V+MVFDGR LPAK+ T +DRR++R+ K A LL EA+ H R
Sbjct: 61 RYVKELLDMGCHVVMVFDGRPLPAKKGTNDDRREQREKRKEHAEMLLAKGLEREARDHYR 120
Query: 62 QSVDVTHKMALNVIQACRAR-GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ ++ ++ IQ R VD +VAP+EADAQ+AYL + D VITEDSDL+VFG
Sbjct: 121 LATSISAEIVSKTIQHFRGTPNVDIVVAPYEADAQLAYLMESKLVDSVITEDSDLIVFGC 180
Query: 121 KKIIYKLD-LSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDYW-TGIKGMG 176
+ I +K +G C ++ L L KF KFR +CIL+GCDY +G+ G+G
Sbjct: 181 EMIYFKWQAATGECSVYEKCNLKKCFTGELGGDKFDFVKFRRICILAGCDYLQSGLPGVG 240
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVK-ITKEFLTSFHNTNLMFLYQPVYDPV 235
+ A + D L+K+ Y K + +T++F+ +F F +Q V+DP
Sbjct: 241 ISTAAKFFSLTSIKDLRTVLKKVPYYLKNPKLKEHVTEDFIRNFERAENTFKHQIVFDPR 300
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELELPKD 267
+ PL P + V L + +LE PK+
Sbjct: 301 ERCQKPLTPYPLDRIGGVDDDLEILDLESPKN 332
>gi|356512555|ref|XP_003524984.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 481
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 146/281 (51%), Gaps = 11/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L +K I+VFDG LP K E R + R + A+A E + A
Sbjct: 60 MHRVNLLRHFGVKPILVFDGGLLPMKSEQENKRARARKDNLARAVEHESDGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ ++A +IQ + + IVAP+EADAQM +L I+G D VITEDSDL+ FG
Sbjct: 120 QKAVDISPQIACELIQVLKQENLQYIVAPYEADAQMTFLAISGQVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G L ++ F MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLSGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ L+ + G V + + SF L F YQ VYDP+++ +V
Sbjct: 240 HASIKKFR--SYDKVLKHLRYSG-----VSVPPFYEESFKKAILTFQYQRVYDPINENIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L S + D++ +L +PKD A ++A G+LDP +
Sbjct: 293 HL----SNISDDIGDELDFLGPTMPKDIAQRIAKGDLDPIT 329
>gi|348686536|gb|EGZ26351.1| hypothetical protein PHYSODRAFT_540882 [Phytophthora sojae]
Length = 398
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 145/283 (51%), Gaps = 8/283 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I LL + + +VFDG LP K+ TEE+RRK R ++ + R SEA+
Sbjct: 60 MDRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKARQKNRELGVQHYNNKRFSEARRCF 119
Query: 61 RQSVDVTHKMALNVIQA-CRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++ DV+ MA VIQ +A V +VAP+EADAQ+AYL G AD VITEDSD L FG
Sbjct: 120 IRAADVSPYMAHRVIQQHLKAHNVQYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFG 179
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+ +++K+D + L + FT+ F MCI SGCDY I G GLKK
Sbjct: 180 CQTVLFKMDRDNVAQEIQAVNLKKNKGLSFHMFTEQMFLEMCIFSGCDYLPSISGFGLKK 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A Y F +R + + GK V+I + F L F +Q VY P KE+
Sbjct: 240 A--YTAMKQHGSFTKIIRALRLEGK----VRIPASYEDDFRKAVLTFRHQRVYCPKKKEL 293
Query: 240 VPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSL 282
VPL P+ + + E+ + L D A +A G++DP ++
Sbjct: 294 VPLTPIPANLL-EIDPTMDFVGPMLDSDIAQAIADGDMDPITM 335
>gi|171679457|ref|XP_001904675.1| hypothetical protein [Podospora anserina S mat+]
gi|170939354|emb|CAP64582.1| unnamed protein product [Podospora anserina S mat+]
Length = 719
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 136/240 (56%), Gaps = 6/240 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + M + + +VFDG LP+K TE R ++R+ ELL + S+A L
Sbjct: 60 MHRVRMFKYYGVTPYLVFDGDFLPSKAKTESSREQRREQSLKTGLELLKAGKPSKAHLEL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++DVT +MA ++I+ + GV +VAP+EADAQ+ YL G +++EDSD+LVFGA
Sbjct: 120 QKAIDVTPEMARHLIEELKKAGVPYLVAPYEADAQLVYLEREGVISGIVSEDSDMLVFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++++ K+D G C + R+ ++ L +TDA+FR+M ILSGCDY + +GLK A
Sbjct: 180 QRLLTKMDQHGQCVEIRRKDFCLVREISLTGWTDAEFRHMAILSGCDYLGAVNNIGLKTA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ P E ++ + GK ++ + +L F L FL+Q V+ P K++V
Sbjct: 240 YRLIRKHKTP--ERIIQMLKFEGK----HRVPENYLEEFKQAELTFLHQRVFCPKKKDIV 293
>gi|326525617|dbj|BAJ88855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 906
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 12/290 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K I+VFDG LP K E R + R + +A E A
Sbjct: 60 MHRVNLLRHHGVKPILVFDGGFLPMKSEQEVKRARSRKENLERAREHEAAGNSRAAFDCY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T K+AL +IQ + VD IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPKIALELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQITRLERNRELDLNGFTKQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + S V + ++ +F F +Q VYDP ++++V
Sbjct: 240 HALIQKLK--SHEKVIKHLRY-----SAVSVPPQYEENFKKAIWAFQFQRVYDPATEDIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
L+ + S++ ++ F L LP+ +ALG +DP + E + P
Sbjct: 293 HLSGIPSDLSEDDF----LGPW-LPQAVVKGIALGEIDPLTKEPFEASTP 337
>gi|255577346|ref|XP_002529553.1| exonuclease, putative [Ricinus communis]
gi|223530965|gb|EEF32822.1| exonuclease, putative [Ricinus communis]
Length = 576
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 161/299 (53%), Gaps = 13/299 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I++L +KI ++VFDG +P K TE +R ++R+S++ A E L + A
Sbjct: 63 MHRINLLRHYKITPVVVFDGASIPCKATTEHERHRRRESNRKLAMEKLEQGNVNAANEFF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
+++V +T MA +IQ R+ V+ +VAP+EADAQ+AYL+ G VITEDSDLL
Sbjct: 123 QRAVSITPLMAHQLIQILRSEKVEFVVAPYEADAQLAYLSSLDAEKGGIAAVITEDSDLL 182
Query: 117 VFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G + ++K+D GN +D+ A K F F MC+L+GCD+ + G
Sbjct: 183 AYGCQATVFKMDRFGNGEEIVLDKVYNAVACKPSFQHFDRELFTGMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ KA +V + N R ++V K+ ++ +++ SF +F + +YD
Sbjct: 243 IGIVKAHSFVVK-----YRNLDRVLSVL-KLEKGNQMPEDYSKSFREALAVFQHARIYDA 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSE 293
+++++ L PL + D + +L ELP A +A GNL+P ++E + + P SE
Sbjct: 297 TTRKLIHLKPLSQNLLDSLDEKLDFLGPELPSSVAIAIAEGNLNPTNMEAFNIF-PSSE 354
>gi|297597717|ref|NP_001044421.2| Os01g0777300 [Oryza sativa Japonica Group]
gi|75114038|sp|Q60GC1.1|EXO1_ORYSJ RecName: Full=Exonuclease 1; AltName: Full=OsEXO-1
gi|54111120|dbj|BAD60834.1| exonuclease-1 [Oryza sativa Japonica Group]
gi|255673742|dbj|BAF06335.2| Os01g0777300 [Oryza sativa Japonica Group]
Length = 836
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 147/283 (51%), Gaps = 11/283 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML H +K I+VFDG HLP K E R + R + +A E A
Sbjct: 60 MHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +IQ + VD IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + S V + ++ +F F +Q VYDPV++++V
Sbjct: 240 HALIQKLK--GHEKVIKHLRY-----SAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
L+ + ++ L LP+ A +A GN+DP + E
Sbjct: 293 HLSGIPHGSSED----LDFLGPWLPQTVAKGIAQGNIDPITKE 331
>gi|167540345|ref|XP_001733569.1| exonuclease [Entamoeba dispar SAW760]
gi|165893427|gb|EDR21684.1| exonuclease, putative [Entamoeba dispar SAW760]
Length = 532
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 158/309 (51%), Gaps = 15/309 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++Y+ HKI I VFDG LP+K+ EE+R K+R S + A + EA
Sbjct: 106 LEYLKFFNIHKIIPIFVFDGATLPSKKLIEEERLKRRKSAYSNALKYEKEGNQIEALICW 165
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q++D+T A VI A RGV CIVAP+ ADAQMAYL+ GY D VI EDSD++ +G
Sbjct: 166 KQAIDITPFHASKVINAFHKRGVQCIVAPYGADAQMAYLSRTGYVDVVICEDSDMIPYGC 225
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLA-KFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+++KL++ N C + LP K P T + + CILSGCDY+ GI G+GLK
Sbjct: 226 SVVLFKLNIVSNICDVYQAQDLP---KTPFGINVTLFQLQITCILSGCDYFQGINGIGLK 282
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
KA V S ++++ K + ++ F +Q +YD K
Sbjct: 283 KALKIVGSC------KTIKQVISSLKKNYKKPLPNNLEEDLNDALFTFNHQYIYDIEEKT 336
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPV 298
++PL E +E+ + K+L+ + Q+A G +DP +LE + D + P+
Sbjct: 337 IIPLTDFEGNETNELIERTLGKKLD--QGVIVQIAEGKIDPNTLEPFNNNEIDIFDLEPI 394
Query: 299 TSIWSKQYE 307
I KQ++
Sbjct: 395 PQI--KQFQ 401
>gi|356528364|ref|XP_003532774.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 743
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 145/281 (51%), Gaps = 11/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L +K I+VFDG LP K E R + R + A+A E + A
Sbjct: 60 MHRVNLLRHFGVKPILVFDGGLLPMKSEQENKRARARKDNLARAVEHESDGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ ++A +IQ + + IVAP+EADAQM +L I+G D VITEDSDL+ FG
Sbjct: 120 QKAVDISPQIACELIQVLKQENLQYIVAPYEADAQMTFLAISGQVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G L ++ F MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGQGVQFQYSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ L+ + G V + + SF F YQ VYDP+++ +V
Sbjct: 240 HASIKKFR--SYDKVLKHLRYSG-----VSVPPFYEESFKKAIFTFQYQRVYDPINENIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L S + D++ +L +PKD A ++A G+LDP +
Sbjct: 293 HL----SNIPDDIGDELDFLGPSMPKDIAQRIAKGDLDPIT 329
>gi|357124321|ref|XP_003563849.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 556
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 16/327 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +I++L HK+ ++VFDG +P K AT++DR KKRD A E L + A
Sbjct: 63 MHHINLLRHHKVVPVVVFDGCSMPCKSATDKDRHKKRDLSLVLAKEKLEQGNTAAAIDFF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
R++V +T MA +IQ R+ V+ +VAP+EADAQ+AYL G VITEDSDL+
Sbjct: 123 RKAVQITPSMAYQLIQILRSENVEFLVAPYEADAQLAYLATLDADQGGIAAVITEDSDLI 182
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G II+K+D GN +K +K + F F MC+L+GCD+ + G
Sbjct: 183 AYGCTAIIFKMDRFGNGEEFIMKKTMETVKDGLSFKDFDQNLFTGMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G K+A +S++ ++N R ++ K+G + ++ SF T +F + VYD
Sbjct: 243 IGTKRA----YSLIS-KYKNIDRVLSTL-KLGKRYSVPDDYSDSFWKTLAVFNHARVYDV 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEE 294
SK + L PLE + + + L + L A +A G+L+P ++E D + S
Sbjct: 297 KSKTLKHLKPLEEQYLNYLAGDLDILGPALAPSMARAIAEGHLNPVTMEAFDNF---SRT 353
Query: 295 NLPVTSIWSKQYEKPCDRHSSEESVSE 321
P+ I + + ++H S+E +S+
Sbjct: 354 ISPIEFIDTSTF-NVANQHGSQEILSQ 379
>gi|146416653|ref|XP_001484296.1| hypothetical protein PGUG_03677 [Meyerozyma guilliermondii ATCC
6260]
Length = 635
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 13/252 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSE--AQS 58
+K + ML ++ +VFDG +LP K T ++RR KR+ + KA L+L RG A
Sbjct: 111 IKKVDMLRHFGVEPYLVFDGAYLPTKAETAKERRIKREEAQQKAD--LLLKRGDRKLAWK 168
Query: 59 HLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
++ VT +MA +++ AR V +VAP+EAD QM YL G D +++EDSDLL+F
Sbjct: 169 EFMKAAGVTPEMAKSIMVELDARKVKYVVAPYEADPQMVYLEKIGAVDGILSEDSDLLIF 228
Query: 119 GAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
G +++I KL+ G C +DR P K+P L+ +T + R + +L+GCDY GI G+GL
Sbjct: 229 GCQRLITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVAMLAGCDYTKGIPGIGL 288
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
K A V+ D + L ++ GK+ F N +L F +Q V+DP K
Sbjct: 289 KTAFTLVWK--HGDLNSVLSALDAEGKVPD------TFADEVFNADLAFQFQKVFDPFEK 340
Query: 238 EVVPLNPLESEM 249
+ LN S++
Sbjct: 341 SLKTLNEYPSDL 352
>gi|190347330|gb|EDK39579.2| hypothetical protein PGUG_03677 [Meyerozyma guilliermondii ATCC
6260]
Length = 635
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 13/252 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSE--AQS 58
+K + ML ++ +VFDG +LP K T ++RR KR+ + KA L+L RG A
Sbjct: 111 IKKVDMLRHFGVEPYLVFDGAYLPTKAETAKERRIKREEAQQKAD--LLLKRGDRKSAWK 168
Query: 59 HLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
++ VT +MA +++ AR V +VAP+EAD QM YL G D +++EDSDLL+F
Sbjct: 169 EFMKAAGVTPEMAKSIMVELDARKVKYVVAPYEADPQMVYLEKIGAVDGILSEDSDLLIF 228
Query: 119 GAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
G +++I KL+ G C +DR P K+P L+ +T + R + +L+GCDY GI G+GL
Sbjct: 229 GCQRLITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVAMLAGCDYTKGIPGIGL 288
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
K A V+ D + L ++ GK+ F N +L F +Q V+DP K
Sbjct: 289 KTAFTLVWK--HGDLNSVLSALDAEGKVPD------TFADEVFNADLAFQFQKVFDPFEK 340
Query: 238 EVVPLNPLESEM 249
+ LN S++
Sbjct: 341 SLKTLNEYPSDL 352
>gi|365758410|gb|EHN00253.1| Exo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 703
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 151/308 (49%), Gaps = 34/308 (11%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRLSLLKTFKVEPYLVFDGDAIPVKKSTEFKRRDKRQENKAIAERLWACGERKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPDMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C C + KLP K PL TD + R M LSGCDY GI +GL
Sbjct: 180 QRLITKLNDYGECLEICRDNFNKLPK--KFPLGLLTDEEIRTMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
A V F+ M E L +I GK I ++ + F +Q V+ P+
Sbjct: 238 ITAMKLVRRFNTM----ERILLRIQREGKFA----IPDAYIDEYEAAVYAFQFQRVFCPI 289
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKEL-------ELPKDQA------------FQLALGN 276
K +V LN + +RD + L E E K Q F++A G+
Sbjct: 290 QKRIVSLNEIPLHLRDTESKRKKLYECIGHVIHRETQKRQIVHFDNDIDHHLHFKIAQGD 349
Query: 277 LDPFSLEE 284
L+P+ +
Sbjct: 350 LNPYDFHQ 357
>gi|290997069|ref|XP_002681104.1| predicted protein [Naegleria gruberi]
gi|284094727|gb|EFC48360.1| predicted protein [Naegleria gruberi]
Length = 382
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 148/286 (51%), Gaps = 11/286 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML +K+ ++VFDG LP+K TE DRR +R +A L R +A
Sbjct: 60 MHMVNMLKHNKVIPVLVFDGARLPSKADTESDRRSRRKEALEQAQIHLQNHRYEQANECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R++VD+ MA +I C+ GV+ +VAP+EADAQ+A+L GY VITEDSDL+ +GA
Sbjct: 120 RKAVDIKPSMAYQLISQCKKEGVEIVVAPYEADAQLAHLARTGYVSCVITEDSDLIPYGA 179
Query: 121 KKIIYKLDLSGNCCFM---DREKLPSA-LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
KI +K+D G+ + D P+A +KFT MCILSGCDY + + G+G
Sbjct: 180 PKIFFKMDKYGHGTLLNLADINHTPTANGSTDFSKFTHDMMMRMCILSGCDYLSSLSGIG 239
Query: 177 LKKAKDYVF-SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
K A + + P ALRK+ GK ++ +F L F +Q V+D +
Sbjct: 240 PKTAYKIIKENRTVPKIMEALRKL---GKFKRQENTQPKYREAFVRAELTFKHQRVFDIL 296
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
S+E+ L S + +E + P D Q+ G +DP S
Sbjct: 297 SQEMRCLTDPPSCLTEE---DIYFCGPTKPTDIVVQICTGMIDPMS 339
>gi|449525676|ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis
sativus]
Length = 685
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 11/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I++L + +K ++VFDG LP K E R + R + A+A E + + A
Sbjct: 60 MHRINLLRHYGVKPVLVFDGGFLPMKNEQEIKRARTRKENLARATEHEMNGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T +A +IQ + V +VAP+EADAQM +L I+ D V+TEDSDL+ FG
Sbjct: 120 QKAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G + L + + FT MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + +E +R + S V + + SF L F +Q VYDP+++++V
Sbjct: 240 HALIXKFL--SYEKVIRHLRY-----STVAVPHLYEESFKKAILTFQHQRVYDPITEDIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L S++ D + L +P+ A +A G++DP
Sbjct: 293 HL----SQISDHIEDDLDFLGPSIPQHIAKGIAEGDIDP 327
>gi|384483460|gb|EIE75640.1| hypothetical protein RO3G_00344 [Rhizopus delemar RA 99-880]
Length = 515
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 22/309 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I+ML +K+ ++VFDG+ LP K+ T R +KR +L+ ++ EA +L
Sbjct: 60 MNLINMLRFYKVIPLVVFDGQSLPMKQETNSKRAQKRKESFNIGFKLVKDNKIKEALPYL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+QS+ +T M V++ GV ++AP+EADAQ+AYL YA ITEDSDLL FG
Sbjct: 120 QQSISITQDMIQQVVKKLDEIGVQHVIAPYEADAQLAYLLKNNYAQAAITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+I+KL+ G+C + E + + + F+ R++C+LSGCDY +KG+GLK A
Sbjct: 180 STVIFKLNRYGDCMRIHFEDISKVID--IKPFSVTTLRHICMLSGCDYLPSLKGIGLKTA 237
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + + E ++ + I Y + F FL+Q VYD +++ V
Sbjct: 238 ETLIKKHL--TIEKVMKALRFRQNIARYQQ-------DFERAETAFLHQFVYDVKTRQFV 288
Query: 241 PLNPLESEMRDEVFSQLSL--KELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPV 298
LN L + E L KE PKD ++ L+ + +E+++ EN+P
Sbjct: 289 RLNELPKGFKQEYLPSLGCDPKEFTGPKDACIAQSINLLNRYCNKELNK------ENIPP 342
Query: 299 TSIWSKQYE 307
W YE
Sbjct: 343 ---WFNLYE 348
>gi|67463104|ref|XP_648209.1| exonuclease I [Entamoeba histolytica HM-1:IMSS]
gi|56464258|gb|EAL42821.1| exonuclease I, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702558|gb|EMD43178.1| exodeoxyribonuclease, putative [Entamoeba histolytica KU27]
Length = 497
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 151/285 (52%), Gaps = 14/285 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL ++I I VFDG LP+K TE DR++KR+ + A + I +E + Q+V++
Sbjct: 66 LLNNEITPIFVFDGARLPSKITTENDRQQKRNENLKTARDTTI--SITERKKAYGQAVEI 123
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
MA VIQ+ GV+ IVAPFEAD Q+ YL GY D +I EDSDL+V G K+I++K
Sbjct: 124 LPWMASAVIQSLNEIGVESIVAPFEADPQLGYLCKIGYVDAIICEDSDLIVHGCKRILFK 183
Query: 127 LDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
+ E L S L K FT Y C+L+GCDY I +G+KKA +
Sbjct: 184 FNKFDETV---EEFLSSDLDKTDFKGFTRNMLVYSCVLAGCDYCKNISKVGIKKAMKIIK 240
Query: 186 SIMDPDFENALRK-INVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP 244
S +P AL K I +G ++ E+LT+ N F Y VY+PV +EVV LN
Sbjct: 241 S--EPSISKALVKLIETHGTELDTMEKKIEYLTNVRNAIFTFNYAYVYNPVDQEVVNLNE 298
Query: 245 LESEMRDEVFSQLSLKELELPKDQAFQ-LALGNLDPFSLEEMDQW 288
+ E+ V L +K P Q Q +A G +DP + + +Q+
Sbjct: 299 VPEELNCMVDDLLGIK----PNKQVAQEIANGTVDPDTHKPFEQF 339
>gi|359491497|ref|XP_002278082.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
Length = 541
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 164/325 (50%), Gaps = 13/325 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I +L +KI ++VFDG ++P K TE++R +KR S+ A L + A
Sbjct: 63 MHRIDLLRHYKITPVVVFDGGNIPCKATTEQERYRKRKSYCDLAMAKLKEGDVTGASELF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
+++V +T MA +IQ R ++ +VAP+EADAQ+AYL+ G VITEDSDL+
Sbjct: 123 QRAVTITPSMAHQLIQILRTENIEFVVAPYEADAQLAYLSNLEADKGGIAAVITEDSDLM 182
Query: 117 VFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G + II+K+D GN +DR A F F MC+L+GCD+ + G
Sbjct: 183 AYGCRAIIFKMDRYGNGEEMVLDRVFDSVARAPSFQNFDKELFTGMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ +A V + N R ++V K ++ +++ SF +F + +YD
Sbjct: 243 IGIARAYSMV-----AKYRNLDRVLSVL-KFEKRNQMPEDYTKSFREAVAVFQHARIYDA 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEE 294
+K V + PL ++ + +L E+P A +A GNLDP ++E D ++ +
Sbjct: 297 DTKRVQHMKPLTDDLLQSLDGELDFLGPEIPPSIATAIAEGNLDPVTMEAFDHFSSHESQ 356
Query: 295 NLPVTSIWSKQYEKP-CDRHSSEES 318
P + S + KP S+EES
Sbjct: 357 PEPTVTQTSNEIVKPEATAQSTEES 381
>gi|449459386|ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 685
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 11/279 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I++L + +K ++VFDG LP K E R + R + A+A E + + A
Sbjct: 60 MHRINLLRHYGVKPVLVFDGGFLPMKNEQEIKRARTRKENLARATEHEMNGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T +A +IQ + V +VAP+EADAQM +L I+ D V+TEDSDL+ FG
Sbjct: 120 QKAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G + L + + FT MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + +E +R + S V + + SF L F +Q VYDP+++++V
Sbjct: 240 HALIKKFL--SYEKVIRHLRY-----STVAVPHLYEESFKKAILTFQHQRVYDPITEDIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDP 279
L S++ D + L +P+ A +A G++DP
Sbjct: 293 HL----SQISDHIEDDLDFLGPSIPQHIAKGIAEGDIDP 327
>gi|366999787|ref|XP_003684629.1| hypothetical protein TPHA_0C00380 [Tetrapisispora phaffii CBS 4417]
gi|357522926|emb|CCE62195.1| hypothetical protein TPHA_0C00380 [Tetrapisispora phaffii CBS 4417]
Length = 784
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 143/263 (54%), Gaps = 15/263 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K ML ++ I+ +VFDG LP K+ TE R++KR +++ A +L A +
Sbjct: 60 IKKFAMLKSYNIQPYLVFDGNSLPVKKQTEVKRKEKRTENRSIAIKLWNSGERRNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA VI C+ G+ +VAP+EAD Q+ YL +I+EDSDLLVFG
Sbjct: 120 QKSVDVTPEMAKCVIDYCKLHGIKYVVAPYEADPQLVYLEKHKIVHGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA-LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+K+I KL+ G C + R+ K P+ + TD + R M LSGCDY GI +GL +
Sbjct: 180 RKLITKLNDFGECIEICRDNFNQVPKKFPIYELTDDQIRVMVCLSGCDYTDGILKIGLIR 239
Query: 180 AKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V MD + I + G V I K FL ++ L F YQ VY P K
Sbjct: 240 AIKLVRQHKTMD-------KIILALQREGKSV-IPKTFLMEYYKACLAFQYQRVYCPNQK 291
Query: 238 EVVPLNPLESEMRDEVFSQLSLK 260
++V LN ++ DEV S++S K
Sbjct: 292 KIVSLN----DLTDEVISKVSEK 310
>gi|156039401|ref|XP_001586808.1| hypothetical protein SS1G_11837 [Sclerotinia sclerotiorum 1980]
gi|154697574|gb|EDN97312.1| hypothetical protein SS1G_11837 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 743
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 124/216 (57%), Gaps = 6/216 (2%)
Query: 25 AKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVD 84
K ATE+DR K+R+ K +LL + S+A +++VDVT +MA +VI + GV
Sbjct: 57 GKAATEKDREKRREDSKRIGQDLLNAGKTSQAYLEFQKAVDVTPEMARHVIDELKEMGVQ 116
Query: 85 CIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 144
IVAP+EADAQM YL G D +++EDSDLLVFGAK ++ KLD GNC +++ +
Sbjct: 117 YIVAPYEADAQMVYLERQGIIDGILSEDSDLLVFGAKCLLTKLDQYGNCIEVNKADFCAC 176
Query: 145 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGK 204
+ L ++DA+FR M ILSGCDY + +GLK A Y E +R I GK
Sbjct: 177 KDVNLTGWSDAEFRRMAILSGCDYLASMSNIGLKTA--YRLVRKHKTIEKVVRMIQFDGK 234
Query: 205 IGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ K +L SF+ FL+Q V+ P + ++V
Sbjct: 235 F----HVPKNYLESFYQAEFTFLHQRVFCPRTLKLV 266
>gi|358054677|dbj|GAA99603.1| hypothetical protein E5Q_06304 [Mixia osmundae IAM 14324]
Length = 687
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 155/306 (50%), Gaps = 26/306 (8%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ +L H ++ VFDG L +K TE+DR +R +A L + A+ ++
Sbjct: 95 VRLLRFHGVEPFFVFDGAALSSKATTEKDRASRRKDALKEAQRLSAEGKEEAAREAYGRA 154
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT +MA VI+ + V+ IVAP+EADAQ+ +L G +ITEDSDLLVFG + +
Sbjct: 155 VDVTPRMAYQVIKMLKQENVNFIVAPYEADAQLRFLEQTGVVQGIITEDSDLLVFGCQTV 214
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
I+KLD G + +L + +T +FR M ILSGCDY I G+GLK A Y
Sbjct: 215 IFKLDNEGRGQEVKASRLNKCREYNFTSWTATEFRQMAILSGCDYLDSISGLGLKTA--Y 272
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLT------SFHNTNLMFLYQPVYDPVSK 237
L+K K+ +V++ +F F L FL+Q V+DP +K
Sbjct: 273 RL----------LKKYKTASKVIQFVRLDGQFRVPRYYEREFKRAELTFLHQIVWDPETK 322
Query: 238 EVVPLNPLESEMRDEVFSQLSLKELELPKDQ--AFQLALGNLDPFSLEEMDQWNPDSEEN 295
+ L PL ++ E +Q L+ + + D+ A LA+G+LDP + M P
Sbjct: 323 KRRFLTPL--PVKHEHLNQDELRFVGMFVDETIAQGLAIGDLDPADSKPMHDVCP----A 376
Query: 296 LPVTSI 301
PV++I
Sbjct: 377 FPVSAI 382
>gi|302418566|ref|XP_003007114.1| exodeoxyribonuclease [Verticillium albo-atrum VaMs.102]
gi|261354716|gb|EEY17144.1| exodeoxyribonuclease [Verticillium albo-atrum VaMs.102]
Length = 273
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 111/180 (61%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + +VFDG LP+K TE R K+RD K ELL + S+A +
Sbjct: 68 MHRVRMLRHFGVTPYLVFDGDFLPSKAMTEGSRAKRRDDSKKLGMELLKAGKNSQAFAEF 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++S+DVT +MA N+I + V+ +VAP+EAD+Q+ YL G +++EDSDLLVFG
Sbjct: 128 QKSIDVTPEMARNLIDELKKIHVEYVVAPYEADSQLVYLERQGIIGGILSEDSDLLVFGC 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+++ KLD GNC ++R + ++ L +TDA+FR M ILSGCDY G+ MGLK A
Sbjct: 188 KRLLTKLDQYGNCIEINRRDFAACREVSLTGWTDAEFRRMAILSGCDYLAGVSNMGLKTA 247
>gi|389747667|gb|EIM88845.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 322
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 137/250 (54%), Gaps = 14/250 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + +L + I +VFDG LPAK TE DR+++R + + L R S+A+
Sbjct: 60 MKNVRLLQHYGITPYLVFDGGPLPAKRGTETDRQQRRQENLERGNVLAAQGRHSQARDFY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A +A V IVAP+EADAQ+AYL G +ITEDSDLLVFG
Sbjct: 120 TKCVDVTPQMAYQLIKALKAENVPYIVAPYEADAQLAYLERQGVVQGIITEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKL-------PSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+ + +KLD ++ + R + P + + L ++D +FR M ILSGCDY +
Sbjct: 180 QNVHFKLDSVNATITSISRSQFSSVTATSPFSNGLSLQGWSDVEFRAMAILSGCDYLPSV 239
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
G+GLK A + +E +R + + GK ++ + + F +FL+Q VY
Sbjct: 240 PGVGLKTA--WTLLRKHGKWEKVVRALRLEGK----KEVPRGYEAMFKRAEKVFLHQRVY 293
Query: 233 DPVSKEVVPL 242
DP + +V L
Sbjct: 294 DPTVEALVCL 303
>gi|407042604|gb|EKE41429.1| exonuclease, putative [Entamoeba nuttalli P19]
Length = 497
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 150/285 (52%), Gaps = 14/285 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL ++I I VFDG LP+K TE DR++KR+ + A + I +E + Q+V++
Sbjct: 66 LLNNEITPIFVFDGARLPSKITTENDRQQKRNENLKTARDTTI--SITERKRAYGQAVEI 123
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
MA VIQ+ GV+ IVAPFEAD Q+ YL GY D +I EDSDL+V G K+I++K
Sbjct: 124 LPWMASAVIQSLNEIGVESIVAPFEADPQLGYLCKIGYVDAIICEDSDLIVHGCKRILFK 183
Query: 127 LDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
+ E L S L K FT Y C+L+GCDY I +G+KKA +
Sbjct: 184 FNKFDETV---EEFLSSELDKTDFKGFTRNMLVYSCVLAGCDYCKNISKVGIKKAMKIIK 240
Query: 186 SIMDPDFENALRK-INVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP 244
S +P AL K I +G + E+LT+ N F Y VY+PV +EVV LN
Sbjct: 241 S--EPSISKALVKLIETHGTELDTKEKKIEYLTNVRNAIFTFNYAYVYNPVDQEVVNLNE 298
Query: 245 LESEMRDEVFSQLSLKELELPKDQAFQ-LALGNLDPFSLEEMDQW 288
+ E+ V L +K P Q Q +A G +DP + + +Q+
Sbjct: 299 VPEELSCMVDELLGIK----PNKQVAQDIANGTVDPDTHKPFEQF 339
>gi|156843134|ref|XP_001644636.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156115283|gb|EDO16778.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 487
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 136/252 (53%), Gaps = 11/252 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ML ++ IK VFDG LP K+ TE RR KR ++ A L + +
Sbjct: 60 IKKLAMLKSYGIKPYFVFDGDSLPVKKDTEVKRRNKRVENREVAIRLYNSGEVRNSMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VDVT +MA V+ C+ +D IVAPFEADAQM YL +I+EDSDLL+FG
Sbjct: 120 QKCVDVTPEMAKCVMDYCQIHHIDYIVAPFEADAQMVYLEKQNIVQGIISEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C C D KLP K PL + ++ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDFGECIEICKDDFNKLPK--KFPLHELSEEGIKTMVCLSGCDYTNGIPRIGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
KA V + D L I GK +I + FL +H + F YQ V+ P+S+
Sbjct: 238 VKAIKLVHQYRNID--KILLSIRRDGKF----QIPETFLQEYHKAVIAFEYQRVFCPISE 291
Query: 238 EVVPLNPLESEM 249
++V LN + E+
Sbjct: 292 KIVTLNDIPMEV 303
>gi|392589296|gb|EIW78627.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 318
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 142/254 (55%), Gaps = 12/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L HKI+ +VFDG LPAK TE +R+++RD + A+A L + ++A+
Sbjct: 60 MSRVRLLKHHKIQPYIVFDGGPLPAKRGTESERKQRRDENLARANALAAQGKHTQAREFY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A RA V +VAP+EADAQ+AYL G D +ITEDSDLLVFG
Sbjct: 120 LKCVDVTPQMAFQLIKALRAEAVPYVVAPYEADAQLAYLERTGLVDGIITEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFM-----DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
K +++KLD + C + D + A + L + DA+FR M ILSGCDY I G+
Sbjct: 180 KHVLFKLD-AVACTLISIQRKDFGSVTDAGGVSLVGWNDAQFRAMAILSGCDYLPSIPGI 238
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GLK A + D +R + K + ++ SF FL+Q VY P+
Sbjct: 239 GLKTAATLLRRHRTVD--QVVRALRFERK----KNVPYNYIESFRLAEKAFLHQRVYCPL 292
Query: 236 SKEVVPLNPLESEM 249
++ ++ L L ++
Sbjct: 293 AERLLCLGVLPEDV 306
>gi|325182167|emb|CCA16620.1| exonuclease 1 putative [Albugo laibachii Nc14]
Length = 701
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 26/301 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + L+ H + +VFDG LP+K TEE RR R + +AKA + L + +A+ H
Sbjct: 60 MARVDNLVRHGVSPYIVFDGGSLPSKAHTEEARRLARQNDRAKAMQFLSQNNKEQARKHF 119
Query: 61 RQSVDVTHKMALNVI-------------------QACRARGVDCIVAPFEADAQMAYLNI 101
+++D++ MA VI Q R + + +VAP+EADAQ+AYL
Sbjct: 120 SRAIDISPYMAHRVILVPSFELDLVQCLHICTGRQRLRQKNIKYVVAPYEADAQLAYLVK 179
Query: 102 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 161
G + VITEDSD LVF K+++K+D +G + + + + + FT F MC
Sbjct: 180 CGLVNGVITEDSDCLVFDCNKVVFKMDWNGKGQEIKVQSILRNSEPNMQGFTHDMFMEMC 239
Query: 162 ILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHN 221
I SGCDY I +GLK + Y LR + + GK VK+ + F
Sbjct: 240 IFSGCDYLANIPRLGLKTS--YNLFRKYGSVRKVLRNLRLEGK----VKVPASYEEDFAK 293
Query: 222 TNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L F +Q VYDP++K++V L+ ++++++ L E+ A +A+G++DP +
Sbjct: 294 AKLTFKHQRVYDPLNKKLVFLSSPPDDLKEQIMDWCFLGP-EISDANATAIAIGDMDPIT 352
Query: 282 L 282
+
Sbjct: 353 M 353
>gi|326506138|dbj|BAJ91308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 150/295 (50%), Gaps = 12/295 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++++L HK+ ++VFDG +P K AT+EDR KKR+ E L + A H
Sbjct: 63 MHHVNLLRHHKVVPVVVFDGGSMPCKSATDEDRHKKRELSLVLGKEKLEQGDKAAAIDHF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
R++V +T MA +IQ + V+ +VAP+EADAQ+AYL G VITEDSDL+
Sbjct: 123 RKAVQITPSMAYQLIQVLKTENVEFVVAPYEADAQLAYLATLDADQGGIAAVITEDSDLI 182
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDYWTGIKG 174
+G II+K+D GN EK +K L F F MC+L+GCD+ + G
Sbjct: 183 AYGCTAIIFKMDRFGNGEEFIMEKTLETVKDGLCFQDFDQNLFTGMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G K+A + + D + K++ + +++ SF T +F + VYD
Sbjct: 243 IGTKRAYSLISKHKNIDLVLSTLKLD------KRYSVPDDYIDSFWKTLAVFNHARVYDV 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
SK + L PLE + + L + L A +A G L+P ++E +Q++
Sbjct: 297 KSKSLKHLKPLEERYLNYLAGDLDILGPALAPSMARAIAEGRLNPVTMETFEQFS 351
>gi|164657682|ref|XP_001729967.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
gi|159103861|gb|EDP42753.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
Length = 572
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 138/255 (54%), Gaps = 12/255 (4%)
Query: 35 KKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADA 94
++R H+ + + RGS A+ +S+DVT MA +I+ RA+G+ +VAP+EADA
Sbjct: 13 RRRQEHRTRGLQYYREKRGSAARDAFVRSIDVTPSMAYELIKILRAQGIPYVVAPYEADA 72
Query: 95 QMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTD 154
Q+AYL G D +ITEDSDLLVFG K +++KLD G+C + R++ A ++ ++
Sbjct: 73 QLAYLEQEGLIDAIITEDSDLLVFGCKTVLFKLDTYGHCVEIQRDRFVHAKQLAFDGWSL 132
Query: 155 AKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKE 214
FR M ILSGCDY I GMGLK A ++ E LR + + GK+ +
Sbjct: 133 DDFRRMAILSGCDYLPSITGMGLKNAHKFLRKYE--SIERVLRVLQLEGKM----HVPPA 186
Query: 215 FLTSFHNTNLMFLYQPVYDPVSK-EVVPLNPLESEMRDEVFSQLSL-KELELPKDQAFQL 272
+ F F +Q V+DP + L PL ++ +++ + + + LE +A +
Sbjct: 187 YAADFARAEFTFAHQRVWDPRGPGSLTTLAPLPCDINEDLLACIGIPPSLE----EARAI 242
Query: 273 ALGNLDPFSLEEMDQ 287
A G+L P + + + +
Sbjct: 243 AHGDLCPITRQPLSR 257
>gi|167378003|ref|XP_001734628.1| exodeoxyribonuclease [Entamoeba dispar SAW760]
gi|165903747|gb|EDR29180.1| exodeoxyribonuclease, putative [Entamoeba dispar SAW760]
Length = 497
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 150/285 (52%), Gaps = 14/285 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL ++I I VFDG LP+K TE DR++KR+ + A + I +E + Q+V++
Sbjct: 66 LLNNEITPIFVFDGARLPSKITTENDRQQKRNENLKTARDTTI--NITERKRAYGQAVEI 123
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
MA VIQ+ GV+ IVAPFEAD Q+ YL GY D +I EDSDL+V G K+I++K
Sbjct: 124 LPWMASAVIQSLNEIGVESIVAPFEADPQLGYLCKIGYVDAIICEDSDLIVHGCKRILFK 183
Query: 127 LDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
+ E L S L K FT Y C+L+GCDY I +G+KKA +
Sbjct: 184 FNKFDETV---EEFLSSDLDKTDFKGFTRNMLVYSCVLAGCDYCKNISKVGIKKAMKIIK 240
Query: 186 SIMDPDFENALRK-INVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP 244
S +P AL K I +G + E+LT+ N F Y VY+PV +EVV LN
Sbjct: 241 S--EPSISKALIKLIETHGAELDTKEKKIEYLTNVRNAIFTFNYAYVYNPVDQEVVNLNE 298
Query: 245 LESEMRDEVFSQLSLKELELPKDQAFQ-LALGNLDPFSLEEMDQW 288
+ E+ V L +K P Q Q +A G +DP + + +Q+
Sbjct: 299 VPEELSFMVDEILGIK----PNKQIAQDIANGTVDPDTHKPFEQF 339
>gi|410078279|ref|XP_003956721.1| hypothetical protein KAFR_0C05950 [Kazachstania africana CBS 2517]
gi|372463305|emb|CCF57586.1| hypothetical protein KAFR_0C05950 [Kazachstania africana CBS 2517]
Length = 719
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I ML + I+ +FDG +P K+ TE RR KR +K A L A
Sbjct: 60 IKKIRMLKSFNIEPYFIFDGDSIPVKKNTELKRRDKRVENKEMAMRLWNAGEKRNAMDFF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA VI+ C+ + +VAPFEAD+QM YL G +I+EDSDLL+FG
Sbjct: 120 QKCVDITPEMAKCVIEYCKINNIKYVVAPFEADSQMVYLEKKGLIHGIISEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
KK+I KL+ G C + R+ +LP K PL + D + R + LSGCDY GI +GL
Sbjct: 180 KKLITKLNDYGECIEIRRDDFSRLPK--KFPLGQLNDEQIRAVVCLSGCDYTDGIPKIGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A F +++ + K+ +Y + KI FL + N F +Q V+ PVS
Sbjct: 238 LTA----FKLVNQ--WKQMEKVILYLQREGKWKIPANFLKEYSLANYAFQFQRVFCPVSN 291
Query: 238 EVVPLNPLESEMRD 251
+V LN + + D
Sbjct: 292 RLVTLNEIPKRLID 305
>gi|403373775|gb|EJY86812.1| Exonuclease 1, putative [Oxytricha trifallax]
Length = 1007
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 152/287 (52%), Gaps = 8/287 (2%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML H + +MVFDG L K++TEE R+K R+ + K E + +A
Sbjct: 61 KRINMLKNHNVTPVMVFDGGKLNMKKSTEEVRQKTREKNYKKFQEYMKKGNMDKAIKKYG 120
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+S+D+T +MA +IQ +A+ V+ IVAP+EADAQ+A+L G+ V TEDSDLL FG K
Sbjct: 121 ESIDITPQMAHVLIQVLKAQEVEYIVAPYEADAQLAFLWHKGHVQVVFTEDSDLLAFGVK 180
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
K+ +K+D G +D +KL + K FT CILSGCDY IKG+G KA+
Sbjct: 181 KVFFKMDSDGFGIEIDLDKLQTIKKPDFTMFTQDMLLTTCILSGCDYLDSIKGIGFMKAQ 240
Query: 182 DYVFSIMDPD-FENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
V D F + L + GK I ++ + L F +Q V+ PV +++V
Sbjct: 241 KLVQESGPVDTFHDVLGYLKDEGK----SVIPDDYEEDYKKAFLTFKFQRVFCPVRQKLV 296
Query: 241 PLNPL-ESEMRDEV--FSQLSLKELELPKDQAFQLALGNLDPFSLEE 284
L+ + E E E+ S ++ + ++A G +DP + +E
Sbjct: 297 MLHDIAECEHGSEIAKIKDTSFLGNDIDDYRTQRIARGEIDPITYQE 343
>gi|12323539|gb|AAG51751.1|AC068667_30 exonuclease, putative; 92014-93872 [Arabidopsis thaliana]
Length = 317
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K IMVFDG LP K E R + R + A+A E S A
Sbjct: 60 MHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++VD++ +A +IQ R VD +VAP+EADAQMA+L I D +ITEDSDL+ FG
Sbjct: 120 SKAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 180 LRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ ++ + S V + + SF L F +Q VYDP +++++
Sbjct: 240 HALITKF--KSYDRVIKHLKY-----STVSVPPLYEESFKRALLTFKHQRVYDPNAEDII 292
Query: 241 PL 242
L
Sbjct: 293 HL 294
>gi|218189150|gb|EEC71577.1| hypothetical protein OsI_03950 [Oryza sativa Indica Group]
Length = 762
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 13/308 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML H +K I+VFDG HLP K E R + R + +A E A
Sbjct: 60 MHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +IQ + VD IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + S V + ++ +F F + VYDPV++++V
Sbjct: 240 HALIQKLK--GHEKVIKHLRY-----SAVSVPPQYEENFRKAIWAFQFHRVYDPVTEDIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLAL-GNLDPFSLEEMDQWNPDSEEN--LP 297
L+ + + + S + ++ PK Q L G+L +E D PDS E+ LP
Sbjct: 293 HLSGIPHGSKG-LASLEAKRKFRAPKVTPKQQVLNGSLPSPRIE--DSGTPDSIEDTSLP 349
Query: 298 VTSIWSKQ 305
+I Q
Sbjct: 350 SNNIQVYQ 357
>gi|222619346|gb|EEE55478.1| hypothetical protein OsJ_03659 [Oryza sativa Japonica Group]
Length = 762
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 7/243 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML H +K I+VFDG HLP K E R + R + +A E A
Sbjct: 60 MHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +IQ + VD IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + S V + ++ +F F +Q VYDPV++++V
Sbjct: 240 HALIQKLK--GHEKVIKHLRY-----SAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIV 292
Query: 241 PLN 243
L+
Sbjct: 293 HLS 295
>gi|53791673|dbj|BAD53243.1| exonuclease-like protein [Oryza sativa Japonica Group]
Length = 783
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 7/243 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML H +K I+VFDG HLP K E R + R + +A E A
Sbjct: 82 MHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECY 141
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +IQ + VD IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 142 QKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 201
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 202 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 261
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + S V + ++ +F F +Q VYDPV++++V
Sbjct: 262 HALIQKLK--GHEKVIKHLRY-----SAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIV 314
Query: 241 PLN 243
L+
Sbjct: 315 HLS 317
>gi|294657671|ref|XP_459977.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
gi|199432866|emb|CAG88226.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
Length = 678
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 12/286 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK I ML ++ +VFDG +LP K T ++RR KR+ + KA EL+ A
Sbjct: 60 MKKIDMLRHFGVEPYLVFDGAYLPTKAETAKERRLKREEAQKKANELIKAGNRKLAWKEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +++ R V IVAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAAGVTPEMAKSIMVELDMRKVKYIVAPYEADPQMVYLERIGLVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+I KL+ G C + R+ + K+P L+ +T + R + +LSGCDY GI G+GLK
Sbjct: 180 NTLITKLNDYGECIEICRDNFCNVKKIPFLSNYTQEQLRLVAMLSGCDYTKGIPGIGLKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A + V + E L + GK K +F + NL F +Q V+ P++K++
Sbjct: 240 AFNLVKRFN--NLEKVLIALRSDGK-----KPPVDFEDEVYKANLAFQFQKVFSPLTKKL 292
Query: 240 VPLN--PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
LN P++ ++ E+ K L+ ++ Q+ G + P +LE
Sbjct: 293 ETLNSYPVDLKLDFEILEACCGKTLD--EEIHAQICTGKVHPNTLE 336
>gi|448082392|ref|XP_004195129.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359376551|emb|CCE87133.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 134/253 (52%), Gaps = 8/253 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + ML ++ +VFDG HLP K T ++R KR+ K KA + + + A
Sbjct: 60 MKKVDMLRHFGVEPYLVFDGAHLPTKGETVKERMLKREEAKMKAEKFTSVGNRTAAWKEY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +++ ARGV +VAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAAAVTSEMAKSIMVELDARGVKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
++ KL+ G C + R+ K+P LA FT+ + R + +LSGCDY G G+GLK
Sbjct: 180 NTLVTKLNDFGECIEICRKNFDKVKKVPGLASFTEEQLRIVAMLSGCDYTKGFPGIGLKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A + V FE L + GK K+ NL F +Q V++PVS+ +
Sbjct: 240 AFNLVRK--HGSFEKVLHALRNDGK-----KVPDNIEDEVFKANLAFQFQKVFNPVSQTL 292
Query: 240 VPLNPLESEMRDE 252
LN +++ E
Sbjct: 293 ETLNEYPTDLSVE 305
>gi|449015893|dbj|BAM79295.1| exonuclease I [Cyanidioschyzon merolae strain 10D]
Length = 557
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 138/256 (53%), Gaps = 14/256 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLI--LDRGS--EA 56
+ + ML + + ++VFDG +PAK TE K+R + +AK EL L RG A
Sbjct: 68 LGRVRMLQHYGVSPLIVFDGGRIPAKSETE----KRRATLRAKNLELATQALARGEIELA 123
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
QS L++S+DVT +MA VI+A R D +VAP+EADAQ+A L+ D VITEDSDL+
Sbjct: 124 QSFLQRSIDVTPEMAYEVIKALRKENFDFLVAPYEADAQLAMLSRENLIDLVITEDSDLI 183
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
V+GA+ I++KLD G +++ L + L F YMC+L+GCD++ GI G
Sbjct: 184 VYGARSILFKLDRYGYGDHVEQRSLGAVTNPSLLTFNPDMLLYMCVLAGCDFFAGIPRTG 243
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
+++A V D N L + Y + F F F Y V+DP +
Sbjct: 244 IRRAHALVQKYRKLD--NILLAVRSKRLSEDY----EAFERGFRKAITAFRYHRVFDPRT 297
Query: 237 KEVVPLNPLESEMRDE 252
++VV LN L S M+ +
Sbjct: 298 RQVVHLNSLPSAMQSD 313
>gi|168048916|ref|XP_001776911.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671767|gb|EDQ58314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 327
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 133/249 (53%), Gaps = 7/249 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ + ML + ++ ++VFDG LP K E R + R + +A E L S A
Sbjct: 60 MRRVQMLRYYGVQPVLVFDGGSLPMKSDQEIKRARSRKENLERALEYERLGNHSAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T +A +IQ R V +VAP+EADAQ+ +L + + D+VITEDSDL+V+G
Sbjct: 120 QRAVDITPAIAFRLIQVLRQENVQYVVAPYEADAQLVFLALNRHVDFVITEDSDLIVYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+I +K+D G + + + L+ FT MCI+SGCDY + G+G+K++
Sbjct: 180 PQIFFKMDKHGQGVGFQISDITANKDIDLSDFTKQMILEMCIMSGCDYLPSLPGIGVKRS 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ AL+ + G V I ++ FH L F + VYDPV KE+V
Sbjct: 240 HGLIKRFR--TYQKALKHLEAKG-----VLIDPQYEQGFHRAILTFRHHRVYDPVKKEMV 292
Query: 241 PLNPLESEM 249
L + SE+
Sbjct: 293 HLTGVPSEL 301
>gi|328354260|emb|CCA40657.1| exonuclease 1 [Komagataella pastoris CBS 7435]
Length = 567
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 149/288 (51%), Gaps = 11/288 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + ML +I VFDG +LP K TE R +R ++ + + A ++
Sbjct: 60 MKRVEMLFHFQITPYFVFDGDYLPCKAETEAKREARRKEYRKLGDQAQLQGNRKLAMNYY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ DVT +MA +I +AR + +VAP+EADAQM YL + G+ D +I+EDSDLLVFG+
Sbjct: 120 QKCCDVTPEMAKALIDEFKARQISFVVAPYEADAQMVYLEMKGFVDGIISEDSDLLVFGS 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+ +I KL+ G C + R +P LA + +FR + LSGCDY GI G+G+ K
Sbjct: 180 RSLITKLNDRGECIHVQRNNFKDCANIPGLAHLSQHQFRIVASLSGCDYTKGIPGIGVIK 239
Query: 180 AKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V + +D F +ALR + GK KI F T + L F +Q V+DP
Sbjct: 240 AFQLVRKYESIDKIF-SALR---LDGKF----KIPASFETEYRLACLAFQFQLVFDPKLH 291
Query: 238 EVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEM 285
+ V L + ++ +++ S ++A G L+P + E +
Sbjct: 292 KPVHLTDIPKDLHEDLDLIYSCAGPRYDDSLHVRVAYGELNPITKEPL 339
>gi|323352397|gb|EGA84932.1| Exo1p [Saccharomyces cerevisiae VL3]
Length = 702
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEXYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|357131085|ref|XP_003567173.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 893
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 145/286 (50%), Gaps = 12/286 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K I+VFDG LP K E R + R + +A E A
Sbjct: 60 MHRVNLLRHHGVKPILVFDGGFLPMKSEQEIKRARSRKENLERAREHEAAGNSRGAFESY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +IQ + V IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPRIASELIQVLKQENVSYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQIMRLEQNRELDFNGFTKQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + S V + ++ +F F +Q VYDP ++++V
Sbjct: 240 HALIQKLK--SHEKVIKHLRY-----SSVSVPPQYEENFKKAIRAFQFQRVYDPATEDIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
L+ + + FS+ LP+ +ALG++DP S E +
Sbjct: 293 HLSGIPHD-----FSEDDFLGPWLPQAVVKGIALGDIDPLSKEPFE 333
>gi|323303082|gb|EGA56885.1| Exo1p [Saccharomyces cerevisiae FostersB]
Length = 607
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|349581199|dbj|GAA26357.1| K7_Exo1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296364|gb|EIW07466.1| Exo1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 702
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|323307136|gb|EGA60419.1| Exo1p [Saccharomyces cerevisiae FostersO]
Length = 702
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|323346487|gb|EGA80774.1| Exo1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 702
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|365987630|ref|XP_003670646.1| hypothetical protein NDAI_0F00840 [Naumovozyma dairenensis CBS 421]
gi|343769417|emb|CCD25403.1| hypothetical protein NDAI_0F00840 [Naumovozyma dairenensis CBS 421]
Length = 723
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 133/263 (50%), Gaps = 15/263 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I ML + I+ +VFDG +P K+ TE RR+KR +K A L A +
Sbjct: 60 IKKISMLKRYNIEPYLVFDGDSVPVKKGTELKRREKRTENKTIAERLWNSGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VDVT +MA VI C+ + IVAPFEAD QM YL +I+EDSDLL+FG
Sbjct: 120 QKCVDVTPEMAKCVIDYCKTNDIKYIVAPFEADPQMVYLEKQNEVQGIISEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C C D +LP K PL + R + LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECIEICRDDFTRLPR--KFPLGQLDSEGLRTLVCLSGCDYTDGIARIGL 237
Query: 178 KKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
A V + MD + I GK K+ EF+ + + F YQ V+ P
Sbjct: 238 VTAIKLVQRYKKMD----RIILGIQREGKF----KVCAEFIEEYRKADYAFQYQRVFCPQ 289
Query: 236 SKEVVPLNPLESEMRDEVFSQLS 258
K++V LN + ++ E +S
Sbjct: 290 QKKIVSLNEIPKDLNVESLKLIS 312
>gi|6324607|ref|NP_014676.1| Exo1p [Saccharomyces cerevisiae S288c]
gi|1706421|sp|P39875.2|EXO1_YEAST RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I; AltName: Full=Protein DHS1
gi|1041655|emb|CAA60749.1| ORF OR26.23 [Saccharomyces cerevisiae]
gi|1420150|emb|CAA99223.1| DHS1 [Saccharomyces cerevisiae]
gi|1840127|gb|AAB47428.1| Exo1p [Saccharomyces cerevisiae]
gi|285814922|tpg|DAA10815.1| TPA: Exo1p [Saccharomyces cerevisiae S288c]
Length = 702
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|151945661|gb|EDN63902.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|190407372|gb|EDV10639.1| exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|207341254|gb|EDZ69360.1| YOR033Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273419|gb|EEU08355.1| Exo1p [Saccharomyces cerevisiae JAY291]
gi|259149515|emb|CAY86319.1| Exo1p [Saccharomyces cerevisiae EC1118]
gi|323331736|gb|EGA73150.1| Exo1p [Saccharomyces cerevisiae AWRI796]
Length = 702
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|357519191|ref|XP_003629884.1| Exonuclease [Medicago truncatula]
gi|355523906|gb|AET04360.1| Exonuclease [Medicago truncatula]
Length = 791
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 147/299 (49%), Gaps = 19/299 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L + +K I+VFDG LP K E R + R + +A E + A
Sbjct: 60 MHRVNLLRHYGVKPILVFDGGLLPMKGDQENKRARSRKENLERAVEHEANGNSTAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ ++A +IQ + V +VAP+EADAQM +L I+ D VITEDSDL+ FG
Sbjct: 120 QKAVDISPQIARELIQVLKQENVQYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G L ++ F MCILSGCDY + GMGLKKA
Sbjct: 180 PRIIFKMDKFGQGVQFQYSMLQKNKELNFEGFNKQMLLEMCILSGCDYLQSLPGMGLKKA 239
Query: 181 KDYV--FSIMDP----------DFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLY 228
+ F D D+ +++ + K V + + SF L F Y
Sbjct: 240 HASIKRFKSYDKVRMEDTVDMHDYSRPKKRVLKHLKYNG-VSVPPFYEESFRKAILTFQY 298
Query: 229 QPVYDPVSKEVVPLNPLESEMRDE------VFSQLSLKELELPKDQAFQLALGNLDPFS 281
Q VYDPVS+ +V L + ++ DE + + + LPKD +A G+LDP +
Sbjct: 299 QRVYDPVSENIVHLANIPEDIGDELDFLDLIQNNTLTRYTPLPKDIGQGIAEGDLDPIT 357
>gi|365763272|gb|EHN04802.1| Exo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 702
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>gi|224133192|ref|XP_002321506.1| predicted protein [Populus trichocarpa]
gi|222868502|gb|EEF05633.1| predicted protein [Populus trichocarpa]
Length = 457
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 162/315 (51%), Gaps = 12/315 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I++L +KI ++VFDG ++P K TE+DR +KR +++ A E L + A
Sbjct: 63 MHRINLLRHYKITPVVVFDGGNIPCKAGTEQDRYRKRKANRELAMEKLKEGNANAATEFF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
++++ +T MA +IQ R+ ++ +VAP+EADAQ+A+L G VITEDSDLL
Sbjct: 123 QRAISITPLMAHQLIQILRSENIEFLVAPYEADAQLAHLASLEAERGGIAAVITEDSDLL 182
Query: 117 VFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G + I+K+D GN +D+ +A K F F MC+L+GCD+ + G
Sbjct: 183 AYGCQATIFKMDRYGNGEEIVLDKVFDAAARKPSFQCFDKELFMGMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ KA YV + N R ++V K+ ++ +++ SF +F + +YD
Sbjct: 243 IGISKAHSYV-----SKYRNLDRVLSVL-KLEKGRQMPEDYSKSFIEALAVFQHARIYDS 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEE 294
+K + + P+ + + + +L E+P A +A GNLDP ++E +
Sbjct: 297 NNKRLEHMKPVPQNLLESLEGKLDFLGPEIPPSVATAIAEGNLDPTTMEAFACFRSPGRL 356
Query: 295 NLPVTSIWSKQYEKP 309
P+ Q +KP
Sbjct: 357 PDPIFIQNPSQLQKP 371
>gi|148270937|gb|ABQ53635.1| exonuclease [Cucumis melo]
Length = 336
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 136/253 (53%), Gaps = 7/253 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I++L + +K ++VFDG LP K E R + R + A+A E + + A
Sbjct: 60 MHRINLLRHYGVKPVLVFDGGLLPMKSEQEIKRARTRKENLARATEHEMNGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T +A +IQ + V +VAP+EADAQM +L I+ D V+TEDSDL+ FG
Sbjct: 120 QKAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G + L + L+ FT MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGQGVEFRYDMLQKNKDLNLSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + +E +R + S V + + SF L F +Q VYDP+++++V
Sbjct: 240 HALIKKFL--SYEKVIRHLRY-----STVSVPHLYEESFKKAILTFQHQRVYDPITEDIV 292
Query: 241 PLNPLESEMRDEV 253
L+ + + D++
Sbjct: 293 HLSQISDHIEDDL 305
>gi|242054579|ref|XP_002456435.1| hypothetical protein SORBIDRAFT_03g036255 [Sorghum bicolor]
gi|241928410|gb|EES01555.1| hypothetical protein SORBIDRAFT_03g036255 [Sorghum bicolor]
Length = 823
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 146/286 (51%), Gaps = 11/286 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML +K I+VFDG LP K E R + R + +A E A
Sbjct: 60 MHRVNMLRHFGVKPILVFDGGLLPIKSYQETKRARSRKENLERAREHEAAGNSRAAFECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +I+ + VD IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPRIASELIEVLKKEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQITRLERNRELDFNGFTRQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + YG V + ++ F F +Q VYDP +++++
Sbjct: 240 HALIQKLK--CHEKVIKHLR-YGA----VSVPPQYEEDFKKAIWAFKFQRVYDPATEDII 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
L S + ++ L LP++ A +ALGN+DP + E +
Sbjct: 293 HL----SSVPHDLIEDLEFLGPWLPQNIAKGIALGNIDPLTKEPFE 334
>gi|167536660|ref|XP_001750001.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771511|gb|EDQ85176.1| predicted protein [Monosiga brevicollis MX1]
Length = 530
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 145/287 (50%), Gaps = 18/287 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK I +L I IMVFDG+ LP+K + R +R + + LL + +EA+
Sbjct: 60 MKRIALLKQCNITPIMVFDGQPLPSKRNENQRRTAQRLEGRKRGLALLREGKRAEARRQF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
QS+ + +A +I+ACR ++ +VAP+EADAQMA+L +GY D V+TEDSDL+V+
Sbjct: 120 SQSIHIDGAIAFQLIEACRKAAIEVLVAPYEADAQMAFLAHSGYVDAVLTEDSDLIVYQV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKM----PLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
IIYKL+ SG M+ L ++ A +T FR+MCIL+GCDY MG
Sbjct: 180 PCIIYKLEESGEAQLMEVNLLYRGAQLDSNINFASWTPTMFRWMCILAGCDYLPSAARMG 239
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
+K A Y + ++ G G E++ F FL+Q V+DP +
Sbjct: 240 IKSA--YRIVRTSRSIAQICKTMSAQGFAGD-----AEYMRGFVKAENTFLHQVVFDPQT 292
Query: 237 KEVVPLN--PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
+++ L P S+ + L E EL A +A G LDP +
Sbjct: 293 QQLRYLTAWPEGSDGSQHNYVG-ELFENEL----ARAIACGALDPMT 334
>gi|363748330|ref|XP_003644383.1| hypothetical protein Ecym_1331 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888015|gb|AET37566.1| hypothetical protein Ecym_1331 [Eremothecium cymbalariae
DBVPG#7215]
Length = 681
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 130/246 (52%), Gaps = 11/246 (4%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ I+ +VFDG + K TE RR+KR+ ++A A L + + ++ VD+T +
Sbjct: 70 YGIEPYLVFDGDSIQVKSGTETKRREKREENRAIAIRLWESGDRRKCVEYFQKCVDITPE 129
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
M +I C G +VAP+EAD Q+ YL +G VI+EDSDLLVFG +++I KL+
Sbjct: 130 MTKVIIDYCATAGFKYLVAPYEADPQLVYLEKSGIVSGVISEDSDLLVFGCRRLITKLNE 189
Query: 130 SGNCCFMDR---EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
G C + R LPS+ PL K D++ R M LSGCDY GI +GL A V
Sbjct: 190 FGECIEISRGDFHHLPSSF--PLGKLDDSELRTMVCLSGCDYTAGIPKVGLLTAIKLVRQ 247
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLE 246
D L I GK KI EF+ + + F YQ VY PV +++V LN +
Sbjct: 248 YRSMD--KILMSIRREGK----RKIPSEFVQEYTFADYAFQYQRVYCPVLRKLVTLNEIP 301
Query: 247 SEMRDE 252
E+RD+
Sbjct: 302 KELRDD 307
>gi|170100216|ref|XP_001881326.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644005|gb|EDR08256.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 340
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 17/258 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L H I+ +VFDG LPAK+ TE R+++R+ H ++ L + + EA+
Sbjct: 60 MHRVRLLQYHNIQPYIVFDGGPLPAKKNTESSRKRRREEHLSRGNTLALQGKHREARECY 119
Query: 61 RQSVDVTHKMA-LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
+S+DVT +MA QA RA + +VAP+EADAQ+AYL G + VITEDSDLLVFG
Sbjct: 120 VKSMDVTPQMASFFRTQALRAENIPYVVAPYEADAQLAYLERMGIVNGVITEDSDLLVFG 179
Query: 120 AKKIIYKLDLSGNCCF-MDREKLPSAL-------KMPLAKFTDAKFRYMCILSGCDYWTG 171
+ ++ KLD+ + + R+ + + L ++D +FR M ILSGCDY
Sbjct: 180 CQNVLLKLDVVASTVISISRKDFGTVTARRSDPNSISLVGWSDVQFRAMAILSGCDYLGS 239
Query: 172 IKGMGLKKAKDYVFSIMD-PDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
I G+GLK A F + E +R I + GK + +L F FL+Q
Sbjct: 240 IPGVGLKTA---CFLLRKWKSVEQVVRVILLEGK----KSVPPGYLERFRLAEKCFLHQR 292
Query: 231 VYDPVSKEVVPLNPLESE 248
VY P+ +++V L P++ +
Sbjct: 293 VYCPLEEKLVYLRPIDGD 310
>gi|448086968|ref|XP_004196223.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359377645|emb|CCE86028.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 133/253 (52%), Gaps = 8/253 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ML ++ +VFDG HLP K T ++R KR+ K KA + + + A
Sbjct: 60 LKKVDMLRHFGVEPYLVFDGAHLPTKGETVKERMLKREEAKMKAEKFSSMGNRTAAWKEY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +++ ARGV +VAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAAAVTSEMAKSIMVELDARGVKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
++ KL+ G C + R+ K+P LA FT + R + +LSGCDY G G+GLK
Sbjct: 180 NTLVTKLNDFGECIEICRKNFDKVKKVPGLASFTKEQLRIVAMLSGCDYTKGFPGIGLKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A + V FE L + GK K+ NL F +Q V++PVS+ +
Sbjct: 240 AFNLVRK--HGSFEKVLLALRNDGK-----KVPDNIEDEVFKANLAFQFQKVFNPVSQTL 292
Query: 240 VPLNPLESEMRDE 252
LN ++M E
Sbjct: 293 ETLNEYPADMSVE 305
>gi|164449252|gb|ABY56082.1| exonuclease [Cucumis sativus]
Length = 336
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 135/253 (53%), Gaps = 7/253 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I++L + +K ++VFDG LP K E R + R + A+A E + + A
Sbjct: 60 MHRINLLRHYGVKPVLVFDGGFLPMKNEQEIKRARTRKENLARATEHEMNGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T +A +IQ + V +VAP+EADAQM +L I+ D V+TEDSDL+ FG
Sbjct: 120 QKAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G + L + + FT MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + +E +R + S V + + SF L F +Q VYDP+++++V
Sbjct: 240 HALIKKFL--SYEKVIRHLRY-----STVAVPHLYEESFKKAILTFQHQRVYDPITEDIV 292
Query: 241 PLNPLESEMRDEV 253
L+ + + D++
Sbjct: 293 HLSQISDHIEDDL 305
>gi|118395354|ref|XP_001030028.1| XPG I-region family protein [Tetrahymena thermophila]
gi|89284313|gb|EAR82365.1| XPG I-region family protein [Tetrahymena thermophila SB210]
Length = 822
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 136/244 (55%), Gaps = 21/244 (8%)
Query: 13 KVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMAL 72
K+++VFDGR LP K+ TEE R K R+ + +A LL D+ +A S+D+T +MA
Sbjct: 59 KIVLVFDGRQLPGKKGTEEKREKSREDSRNEAQLLLAQDKKDQAYKKFASSIDITPQMAF 118
Query: 73 NVIQACRAR-GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKL---- 127
+I+A R V+CIVAP+EADAQ+AYL+ Y D V +EDSDLL FG KK+++KL
Sbjct: 119 ELIKAVEGRPNVECIVAPYEADAQLAYLSQIDYVDVVFSEDSDLLAFGCKKVLFKLYKGD 178
Query: 128 -DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
+G+ +D K + M L + F CI SGCDY +K MG++ A F
Sbjct: 179 NKETGDEISLDNIKNCKEINMSL--WNHNMFLTACIFSGCDYLPSLKKMGIQTA----FK 232
Query: 187 IMDPDFENALRKINVYGKIGSY---VKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
++ +F+ +K + + +Y V ++F +F L F +Q VY P+ +E+ LN
Sbjct: 233 LV-GEFK-QFKKCMLSIQQKNYDVPVDYDEKFQLAF----LTFRFQYVYCPIKEEIRTLN 286
Query: 244 PLES 247
S
Sbjct: 287 TYNS 290
>gi|297740589|emb|CBI30771.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 22/286 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L + ++ I+VFDG LP K E R + R + A+A E + A
Sbjct: 60 MHRVNLLRHYGVEPILVFDGGLLPMKIEQENKRARVRKENLARAIEHESNGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ +A +IQ + V IVAP+EADAQM +L ++ D +ITEDSD++ FG
Sbjct: 120 QKAVDISPSIARELIQVLKQENVSYIVAPYEADAQMTFLAVSQQVDAIITEDSDMIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G + ++ A FT MCILSGCDY + GMGLKKA
Sbjct: 180 PRIIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEMCILSGCDYLQSLPGMGLKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYDPV 235
+ +K Y K+ +++ + + SF L F +Q VYDP
Sbjct: 240 HALI------------KKFKSYDKVIKHLRYATGSVPPLYEESFKKAMLTFQHQRVYDPT 287
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
+++V L+ L S+ D + + ++L + +D A +A G+LDPF+
Sbjct: 288 IEDIVHLSVL-SDNVDRILTIITL----ISQDIAKGIATGDLDPFT 328
>gi|367009066|ref|XP_003679034.1| hypothetical protein TDEL_0A04910 [Torulaspora delbrueckii]
gi|359746691|emb|CCE89823.1| hypothetical protein TDEL_0A04910 [Torulaspora delbrueckii]
Length = 593
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 134/250 (53%), Gaps = 15/250 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ I ML + KI+ +FDG + K+ TE RR+KR +K+ A +L L S A +
Sbjct: 60 IRKISMLKSFKIEPFFIFDGDAIGVKKDTEVKRREKRAENKSIAEKLWKLGERSNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VDVT +MA +I C+ + IVAPFEADAQM YL +++EDSDLL+FG
Sbjct: 120 QKCVDVTPEMAKCIIDYCKTNRIQYIVAPFEADAQMVYLEKQNLIHGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+K+I K++ G C C D ++LP K PL + TD + R M LSGCDY +GI +GL
Sbjct: 180 RKLITKMNDFGECIEICRDDFDQLPR--KFPLNQLTDEEIRIMVCLSGCDYTSGIPKVGL 237
Query: 178 KKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
A V F +D L I GK K+ F N F +Q V+ P+
Sbjct: 238 ITAMKLVRQFRTLD----RVLLSIQRDGK----YKVPPNFDQETILANFAFQFQRVFCPI 289
Query: 236 SKEVVPLNPL 245
+++V L +
Sbjct: 290 RRKIVSLTEI 299
>gi|293335579|ref|NP_001167749.1| uncharacterized protein LOC100381439 [Zea mays]
gi|223943749|gb|ACN25958.1| unknown [Zea mays]
gi|414880249|tpg|DAA57380.1| TPA: hypothetical protein ZEAMMB73_036244 [Zea mays]
Length = 826
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML ++ I+VFDG LP K E R + R + +A E A
Sbjct: 60 MHRVNMLRHFGVRPILVFDGGLLPIKSYQEGKRARSRKENLERAREHEAAGNSRAAFECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +I+ + V+ IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPRIASELIEVLKKENVNYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQITRLEQNRELDFNGFTRQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + YG V + ++ F F +Q VYDP +++++
Sbjct: 240 HALIQKLK--CHEKVIKHLR-YGA----VSVPPQYEEDFKKAIWAFKFQRVYDPATEDII 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
L S + + L LP++ A +ALGN+DP + E + NP+
Sbjct: 293 HL----SSVPQSLIEDLEFLGPWLPQNIAKGIALGNIDPLTKEPF-EINPE 338
>gi|359483569|ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
Length = 658
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 144/286 (50%), Gaps = 21/286 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L + ++ I+VFDG LP K E R + R + A+A E + A
Sbjct: 60 MHRVNLLRHYGVEPILVFDGGLLPMKIEQENKRARVRKENLARAIEHESNGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ +A +IQ + V IVAP+EADAQM +L ++ D +ITEDSD++ FG
Sbjct: 120 QKAVDISPSIARELIQVLKQENVSYIVAPYEADAQMTFLAVSQQVDAIITEDSDMIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G + ++ A FT MCILSGCDY + GMGLKKA
Sbjct: 180 PRIIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEMCILSGCDYLQSLPGMGLKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYDPV 235
+ +K Y K+ +++ + + SF L F +Q VYDP
Sbjct: 240 HALI------------KKFKSYDKVIKHLRYATGSVPPLYEESFKKAMLTFQHQRVYDPT 287
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
+++V L S + D V L + +D A +A G+LDPF+
Sbjct: 288 IEDIVHL----SVLSDNVGDDLDFLGPLISQDIAKGIATGDLDPFT 329
>gi|255732117|ref|XP_002550982.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
gi|240131268|gb|EER30828.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
Length = 678
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 127/241 (52%), Gaps = 8/241 (3%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I+ML I VFDG LP K+ T ++R+K+R K A + L + A ++
Sbjct: 63 INMLRYFGITPYFVFDGAALPTKQETNKERQKRRQEAKELAEKYLAANNPQLAGKQFMKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VT +MA +++ G+ IVAP+EAD QM YL G D +++EDSDLL+FG KK+
Sbjct: 123 AYVTSQMAKSIMSELDIMGIKYIVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCKKL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
I KL G+C ++RE ++P L + ++ + R + +LSGCDY GI G+GL KA
Sbjct: 183 ITKLKDDGSCYEINRENFGKVRQIPYLNQLSNDQLRLVAMLSGCDYTKGIPGIGLTKA-- 240
Query: 183 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPL 242
+ + + E L + GK F NL F +Q V+DP ++E+ L
Sbjct: 241 FQLTRKHNNLEKILIALRSTGKSAP-----PNFRDEVELANLAFQFQKVFDPRTQELTTL 295
Query: 243 N 243
N
Sbjct: 296 N 296
>gi|440292196|gb|ELP85438.1| exodeoxyribonuclease, putative [Entamoeba invadens IP1]
Length = 516
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 154/288 (53%), Gaps = 9/288 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK L + +I I VFDG LP+K+ TE++R+K RD KA +L ++++ +
Sbjct: 60 MKVAQCLQSCQITPIFVFDGAELPSKKMTEDERKKSRDCALEKAKQLEDSGLVNDSEKYY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++V++ MA I++ R GV+ IVAP+EAD+++ YL+ GY D V+ EDSDL+V G
Sbjct: 120 NKAVEIKPWMATAAIKSLREIGVESIVAPYEADSELGYLSKIGYVDAVLCEDSDLIVHGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K++ + +LS + + + L + + K Y+C+ +GCDY ++G+G+KKA
Sbjct: 180 KRVWFGFNLSEET--VKEFTIENFAHTELGQLSREKLVYLCVFAGCDYCKSLRGVGIKKA 237
Query: 181 KDYVFSIMDPDFENALRKI--NVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
V S + D E L K+ + + + +++L + + F Y VYDP+S+
Sbjct: 238 LKLVTSAV--DIEKVLDKMVNETFKYQFNDNEEKRKYLENVRDAVFTFNYAYVYDPISEN 295
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMD 286
+V N + DE ++ L + D ++A G LDP + E D
Sbjct: 296 IVNTNEVP---EDEEMNKRRLLGERIEDDIGKRVAEGELDPSTHECFD 340
>gi|50309395|ref|XP_454705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643840|emb|CAG99792.1| KLLA0E16743p [Kluyveromyces lactis]
Length = 671
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 133/252 (52%), Gaps = 10/252 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I ML KI VFDG + K+ TE R +KR ++ KA L A +
Sbjct: 60 IKRISMLRHFKITPFFVFDGDSIQVKKETELKRAEKRKENREKAHALFEAGDRRLAYDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ V +T MA VI+ + + +VAP+EADAQM YL G +I+EDSDLLVFG
Sbjct: 120 QKCVSITPDMAKCVIEYLQMNSIPYVVAPYEADAQMVYLEKQGLVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
++I KL+ + C +DR E+L K PL+K T+ + R + LSGCDY +GI +GL
Sbjct: 180 TRLITKLNDNAECIEIDRRNFERLNEG-KFPLSKLTEDQLRSLVCLSGCDYTSGIPKVGL 238
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A YV + + E + I GK+ + F + N F +Q V+ P+++
Sbjct: 239 VTAMKYV--VKNRTMEQMIMAIKREGKLS----VPHTFWEEYQYANFAFQFQRVWCPLNE 292
Query: 238 EVVPLNPLESEM 249
+V LN + +E+
Sbjct: 293 RLVTLNAIPNEL 304
>gi|428168266|gb|EKX37213.1| hypothetical protein GUITHDRAFT_40221, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 135/247 (54%), Gaps = 6/247 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML + + I+V DGR LP K +R +R+S +A ELL S A L
Sbjct: 60 MHLVNMLKFYGVTPIIVLDGRSLPGKARVNSERNARRESQRALGMELLRRGDRSGALKCL 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+QS+ VT +MA ++ V CIV+P+EADAQM+Y+ G A VI+EDSD++ FG
Sbjct: 120 QQSIHVTAEMAHAFHARLQSEKVTCIVSPYEADAQMSYMVRKGMAQAVISEDSDMVPFGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
I+YK+D SG+CC + + L K M ++K + +MCIL+GCDY I G+G++
Sbjct: 180 DMILYKMDTSGSCCIFENKPLGEGNKKSMDVSKLSGDARIHMCILAGCDYLQSIPGIGIQ 239
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
KA Y D + A+ + + K+ K+ + +F +F +Q VYD ++
Sbjct: 240 KA--YGLIREHGDGKKAIEALRKHPKMKE--KVPDGYEDAFERAEKLFKHQWVYDMEERK 295
Query: 239 VVPLNPL 245
+V + +
Sbjct: 296 LVNMTQV 302
>gi|365989346|ref|XP_003671503.1| hypothetical protein NDAI_0H00860 [Naumovozyma dairenensis CBS 421]
gi|343770276|emb|CCD26260.1| hypothetical protein NDAI_0H00860 [Naumovozyma dairenensis CBS 421]
Length = 416
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 158/303 (52%), Gaps = 29/303 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ M+ I+ +VFDG + K A E DR +KR+++K A +L A
Sbjct: 60 IRKFKMMKQLNIQPFVVFDGGPIEVKRAIEMDRLRKRENNKLMAKKLWCNGERHAAMERF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA +I C+ + ++APFEAD+QM YL G D +I+EDSD+L+FG
Sbjct: 120 QKSVDVTTEMAKCIIDYCKDNSIPYVIAPFEADSQMVYLEKIGMIDGIISEDSDILIFGG 179
Query: 121 KKIIYKLDLSGNCCFM---DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
++I KL+ SG+C + D K+ + K P+ + T + R + LSGCDY GI +GL
Sbjct: 180 NRLITKLNDSGDCLQISSADFIKVQTE-KFPIGELTADQIRMLVCLSGCDYTNGIWKIGL 238
Query: 178 KKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
A V FS M+ + L+++N K Y+ I+ FL + N F YQ V+ P
Sbjct: 239 ITAMKLVKQFSDMNSII-SYLKELNNDKK--KYI-ISDTFLQEYEFANYSFQYQRVFCPK 294
Query: 236 SKEVVPLNPLE---SEMRDEVFSQL----------SLKE------LELPKDQAFQLALGN 276
E+V LN + S E+ SQ SL++ ++ + Q+A+GN
Sbjct: 295 RNEIVTLNEISNITSNKELEIISQCIGSVVRKGDKSLRKECVTNSEDINHELYLQVAVGN 354
Query: 277 LDP 279
LDP
Sbjct: 355 LDP 357
>gi|145493760|ref|XP_001432875.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399990|emb|CAK65478.1| unnamed protein product [Paramecium tetraurelia]
Length = 553
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 150/283 (53%), Gaps = 20/283 (7%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K + ML ++I I++FDGR+L AKE TE+ R++ + + KA EL EA+ + +
Sbjct: 61 KMLIMLKEYEITPILIFDGRNLRAKEKTEQMRKQIKQQNLLKAKELQESGNTEEAKRYYQ 120
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ + + +M R V I+AP+EADAQ+A++ ++G D+ ITEDSDL+ +
Sbjct: 121 RCLKIRKQMMYTTFDVLRELEVQYIIAPYEADAQIAHMCLSGQCDFAITEDSDLICYQCP 180
Query: 122 KIIYKLDLSGNCCFMDREKLPSA-----------LKMPLAKFTDAKFRYMCILSGCDYWT 170
I++KL +G C ++ +KL + ++ LA F + + +CI+SGCDY
Sbjct: 181 LIVFKLQSNGACFELELQKLRESRQNRAHIKSDDIRQFLA-FKNEQLIDVCIMSGCDYVP 239
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
I+GMG+KKA DY+ S D D N + K+ + KI +E+ T L+F +Q
Sbjct: 240 SIRGMGIKKAIDYM-SKYD-DISNTISKLKKAKQFNG--KIPEEYEKIVKATRLIFQFQT 295
Query: 231 VYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLA 273
VY P K+ V LN E D L + LP DQ QL
Sbjct: 296 VYCPTKKQWVQLN---QEKYDGFLETLEQDKF-LPLDQIQQLV 334
>gi|298708646|emb|CBJ26133.1| exonuclease, putative; 92014-93872 [Ectocarpus siliculosus]
Length = 587
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 136/240 (56%), Gaps = 10/240 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK +++LL H I+ +MVFDG LP K + +RR++R++ ++K L A H
Sbjct: 60 MKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++V VTH MA +++A R GV+ +VAP+EADAQ+A+L+ G D V++EDSD L +G
Sbjct: 120 SKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
KK+++K+D G+ + L + + L+ + ++ F +C+L GCDY + +KG+G+
Sbjct: 180 KKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIAT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKE-FLTSFHNTNLMFLYQPVYDPVSKE 238
A V D +L KI G I S + E + + L F + +Y+P +++
Sbjct: 240 AYKLV------DRHRSLDKI--IGAINSSRFVIPEGYWEQYKRARLTFRHHIIYNPETED 291
>gi|260801469|ref|XP_002595618.1| hypothetical protein BRAFLDRAFT_64728 [Branchiostoma floridae]
gi|229280865|gb|EEN51630.1| hypothetical protein BRAFLDRAFT_64728 [Branchiostoma floridae]
Length = 275
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRH-LPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH 59
M I +LL + + ++VFDGR+ LPAK R++ R + A L+ + +
Sbjct: 60 MGRIEILLRNGVTPLVVFDGRNPLPAKAELTAKRKQDRQKARTFARFALMEKNTTRFDRN 119
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
+ ++V +M NVI+A + RGVD ++AP+EAD Q+A+++++G ADYVITEDSDLLV+G
Sbjct: 120 CQDGLEVKPEMVDNVIKALKDRGVDYLMAPYEADPQLAFMSMSGAADYVITEDSDLLVYG 179
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
AKK+IYK D + S P +FT KF++MCI+SGCDY I+ +GLK+
Sbjct: 180 AKKVIYKWDGHDGQLILHHHLYRSYPDFP--QFTFEKFQHMCIISGCDYLGSIESIGLKR 237
Query: 180 AKDYVFSIMDPD-FENALRK 198
A +V S+ D D F+ L K
Sbjct: 238 AATFVKSVGDGDIFKTRLTK 257
>gi|440291991|gb|ELP85233.1| exodeoxyribonuclease, putative [Entamoeba invadens IP1]
Length = 476
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 37/300 (12%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+++ I + VFDG LPAK TEE R+ KR A +L + + A S
Sbjct: 60 MEFVTFFKTQGIIPLFVFDGATLPAKMKTEEARQLKRQQALENAKQLDKEGKDTMALSFY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D+T KMA +VI R V+ +VAP+EADA++AYL+ GY D V+ EDSDL+ +G+
Sbjct: 120 KKAIDITPKMAFDVINELRRSNVEYVVAPYEADAELAYLSRTGYVDLVVCEDSDLIPYGS 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM----CILSGCDYWTGIKGMG 176
I++K+++ L A +PL+ F ++ C+++GCDY+ GI+G+G
Sbjct: 180 TAILFKMNVGEGVA-----DLYKAADLPLSPFGSNVSLFLVQIVCVVAGCDYFEGIEGIG 234
Query: 177 LKKA----------KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMF 226
+KK KD VF I + + V KI +E L +F+
Sbjct: 235 MKKGLEMLKKCKTEKDAVFEIKKKKKMSGDEALQVQQKI-------REALFTFN------ 281
Query: 227 LYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKEL---ELPKDQAFQLALGNLDPFSLE 283
+Q VYD K +V L +E+ R +F +++++ + D ++A+G++DP +LE
Sbjct: 282 -HQYVYDIEDKLIVNLTEIEASER-TLFDDTTIEKVLGKKFSNDIGKKIAIGSIDPNTLE 339
>gi|406604572|emb|CCH43989.1| Exonuclease 1 [Wickerhamomyces ciferrii]
Length = 649
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 145/283 (51%), Gaps = 12/283 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I ML +I+ VFDG + +K TE +R +KR +K K ELL A
Sbjct: 61 KRIMMLRHFEIEPYFVFDGDNFSSKSDTELEREQKRLKNKEKGLELLRNGDKKGAFEFFS 120
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+SVD+T MA VI+ + + IVAP+EAD QM YL G D +I+EDSDLLVFGA+
Sbjct: 121 KSVDITPAMAKAVIEYLKEEKIKYIVAPYEADPQMVYLEKLGLVDGIISEDSDLLVFGAQ 180
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
++ KL+ + + RE + ++P+ D++ + LSGCDY +G+ G+G+ A
Sbjct: 181 HLLTKLNDTAQFVDIRRENFKNCKEVPIGLIDDSQLIMVACLSGCDYTSGVPGVGIVTAF 240
Query: 182 DYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
V MD L + + GK + + F + +L F +Q V++P++ E+
Sbjct: 241 KLVKRLGTMD----KCLMSLRLEGK----SNVPQGFQLEYKKADLSFRFQRVFNPITNEI 292
Query: 240 VPLNPLESEMR-DEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
LN + M+ DE + L D F++A+ LDP S
Sbjct: 293 STLNEVPQLMKSDEELLPECIGPLH-DNDIHFKVAMAELDPIS 334
>gi|444315221|ref|XP_004178268.1| hypothetical protein TBLA_0A09650 [Tetrapisispora blattae CBS 6284]
gi|387511307|emb|CCH58749.1| hypothetical protein TBLA_0A09650 [Tetrapisispora blattae CBS 6284]
Length = 751
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 128/248 (51%), Gaps = 11/248 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K ML I+ +VFDG LP K+ TE+ RR KRD K A L A +
Sbjct: 60 IKKFSMLRTFNIEPYLVFDGDSLPVKKNTEKKRRTKRDDSKEIAIRLWNAGEKRNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SV +T +MA +I C+ + IVAPFEAD+QM YL G +I+EDSDLL+FG
Sbjct: 120 QKSVSITPEMAKCIIDYCKNNHIRYIVAPFEADSQMVYLEKKGIVQGIISEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ C C +D KL +K PL K T + M LSGCDY GI +GL
Sbjct: 180 QRLITKLNDYAECIEICSLDFGKL--TVKFPLGKLTPLEMIAMVCLSGCDYTDGIPKIGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A + +++ +I + + I + F + N F +Q V+ P+ +
Sbjct: 238 VNAMKLI------QQHHSMDRILLNLRRAGKHNIPENFEQEYKNATFAFQFQRVFCPIGQ 291
Query: 238 EVVPLNPL 245
++V LN +
Sbjct: 292 KLVHLNDI 299
>gi|17553464|ref|NP_499770.1| Protein EXO-1 [Caenorhabditis elegans]
gi|15718185|emb|CAB07612.2| Protein EXO-1 [Caenorhabditis elegans]
Length = 639
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 133/254 (52%), Gaps = 6/254 (2%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
KY+ LL V+MVFDGR LPAK+ T E+RR+ R+ K A LL EA+ R
Sbjct: 61 KYVKELLGMGCHVVMVFDGRPLPAKKGTNEERRELREKRKEHAEMLLAKGLEREARDTYR 120
Query: 62 QSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ ++ + N IQ R+ VD +VAP+EADAQ+AYL D VITEDSDL+VFG
Sbjct: 121 LATSISADIVENTIQYFRSMTNVDIVVAPYEADAQLAYLVQEKLVDAVITEDSDLIVFGC 180
Query: 121 KKIIYKL-DLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDYW-TGIKGMG 176
+ I +K +G C ++ L + L KF KFR +CILSGCDY G+ G+G
Sbjct: 181 EMIYFKWQSATGECSVYEKCNLKNCFTGELGGDKFDFVKFRRICILSGCDYLQAGLPGVG 240
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVK-ITKEFLTSFHNTNLMFLYQPVYDPV 235
L A + D LRK+ Y K + + EF+ +F F +Q V+DP
Sbjct: 241 LSTAAKFFSMTSIKDLRTLLRKVPSYLKNPKLKEHVNDEFIRNFEKAENTFKHQIVFDPR 300
Query: 236 SKEVVPLNPLESEM 249
+ PL P E+
Sbjct: 301 ERCQKPLTPYPKEV 314
>gi|123488984|ref|XP_001325288.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
gi|121908185|gb|EAY13065.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
Length = 402
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 23/324 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK ML+ + IK I+VFDGR LPAK T E RR R++ KA EL SEA +
Sbjct: 60 MKRAQMLIDNGIKPIIVFDGRELPAKIGTNEKRRALRNTSLQKADELERRGLSSEAYEYY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++++D++ ++ + ++ R + +D VAP+EADAQ++YL D+VITEDSDL+ +
Sbjct: 120 KKAIDISPQVLFPLFKSLRKKHIDFFVAPYEADAQLSYLARNKICDFVITEDSDLIPYEC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYWTGIKGMGLKK 179
I++LD GNC D + +P+ K FT C+LSGCDY G++
Sbjct: 180 PLTIFRLDSDGNC---DAISYADLINVPILKSFTPRMILEACVLSGCDYLPSAPNFGIRT 236
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A V + + I+ + G V + SF +F Q V+DP SK
Sbjct: 237 AFKLVGQT-----GSGQKAIDAAERTGK-VAFPPGYRESFDVAVSVFRQQKVFDPRSKIT 290
Query: 240 VPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT 299
VP E+ L +L A LA+G L+P +LE ++ + D + P
Sbjct: 291 VPC--FEA-------GNCELAGEDLDTKDARNLAIGLLNPRTLEPFEELSDDEDSQSPAI 341
Query: 300 SIWSKQYEKPCDR----HSSEESV 319
++ + R H EE V
Sbjct: 342 PRFNITATESARRQFKSHFGEEEV 365
>gi|356522842|ref|XP_003530052.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 575
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 155/293 (52%), Gaps = 12/293 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L +KI ++VFDG ++P K ATEE+R +KR +++ A L A
Sbjct: 63 MHRVNLLRFYKITPVVVFDGCNVPCKAATEEERNRKRRANRELAMAKLKEGNVGAASELF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYAD----YVITEDSDLL 116
+++V +T MA +IQ ++ ++ +VAP+EADAQ+AY++ G + VITEDSDL+
Sbjct: 123 QRAVSITPVMAHKLIQTLKSEKIEFVVAPYEADAQLAYMSQLGVENGGVAAVITEDSDLI 182
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSA--LKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G II+K+D GN ++ EK+ SA + F MC+L+GCD+ + G
Sbjct: 183 AYGCPAIIFKMDRHGNGERIELEKVFSAESGRPSFRSFNMKLLTGMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ +A V + N R ++V KI ++ +++ SF +F + +YD
Sbjct: 243 IGIARAHALV-----SKYRNLDRILSVL-KIEKGDQMPEDYAKSFQEAVAVFEHAQIYDV 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQ 287
SKE+ +NPL + + E+P +A GNL+P + + D+
Sbjct: 297 NSKELKHMNPLPENFLGSLDGKFDFLGPEIPPSIVTAIAEGNLNPSTKKAFDK 349
>gi|150866513|ref|XP_001386143.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
gi|149387769|gb|ABN68114.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
Length = 676
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ML ++ VFDG LP K T +RR KR + KA E + S A
Sbjct: 60 LKRVDMLRHFGVEPYFVFDGAALPTKAETANERRVKRQEARKKAEEYSKAGKRSLAWKEY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +V+ ARG+ IVAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAASVTSQMAKSVMVELDARGIKYIVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
++I KL G + R+ +P L+KF+ + R + +LSGCDY GI+G+G+K
Sbjct: 180 NRLITKLKDDGTLVEICRQDFHKVKSIPYLSKFSQEQLRLIAMLSGCDYTNGIQGIGIKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
A + V E + + GK I + F H NL F +Q V++P
Sbjct: 240 AFNLVQK--HAKLERIVAVLRAEGK-----PIDEGFHDELHRANLAFQFQKVFNP 287
>gi|255562588|ref|XP_002522300.1| exonuclease, putative [Ricinus communis]
gi|223538553|gb|EEF40158.1| exonuclease, putative [Ricinus communis]
Length = 629
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 131/250 (52%), Gaps = 17/250 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L + +K I+VFDG LP K E R + R + ++A E + A
Sbjct: 30 MHRVNLLRHYGVKPILVFDGGLLPMKSEQENKRARSRKENLSRAIEHEANGNSAAAYECY 89
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ +A +IQA + V +VAP+EADAQM +L I+ D VITEDSDL+ FG
Sbjct: 90 QKAVDISPSIAHELIQALKQENVSYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGC 149
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+I++K+D G +L ++ + FT MCILSGCDY + GMGLK+A
Sbjct: 150 PRIVFKMDKYGQGIEFQYSRLQLNKELSFSGFTHEMILQMCILSGCDYLQSLPGMGLKRA 209
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYDPV 235
+ K Y K+ ++K + + SF L F +Q VYDP+
Sbjct: 210 HALI------------TKFKSYDKVIKHLKYSTISVPPLYEESFRKAILTFQHQRVYDPI 257
Query: 236 SKEVVPLNPL 245
+++++ L+ L
Sbjct: 258 AEDIIHLSDL 267
>gi|403361276|gb|EJY80337.1| 5'-3' exonuclease (including N-terminal domain of PolI) [Oxytricha
trifallax]
Length = 714
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 14/257 (5%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I L + I IMVFDG LP K+ EE R+K R+ + A +LL +A ++
Sbjct: 66 IKQLQINGITPIMVFDGARLPMKKRIEEQRKKAREDSRNLAEDLLAKGDQHQAIRKFMEA 125
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V++ M + Q V +VAP+EADAQ+A+L G D +ITEDSDLLV+G ++
Sbjct: 126 VEINSLMIYRLTQVLETMNVQFVVAPYEADAQLAHLFKTGKVDLIITEDSDLLVYGVTRV 185
Query: 124 IYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRY-----MCILSGCDYWTGIKGMG 176
++K+D G ++D L A KMP + F Y CIL+GCDY +KG+G
Sbjct: 186 LFKMDPQGQGIYIDLNNLNQCDAFKMPQSNGGKV-FDYDLLLKTCILNGCDYCESLKGVG 244
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
K A +M ++ +R+I V G + I + ++ F L F YQ V+D +
Sbjct: 245 FKTA----LKLM-KEYNGDIRQI-VESLRGKNIPIRQNYMQDFQRAELTFKYQVVFDMEN 298
Query: 237 KEVVPLNPLESEMRDEV 253
K+ LN L + D +
Sbjct: 299 KKQKYLNELPDNISDSI 315
>gi|50289437|ref|XP_447150.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526459|emb|CAG60083.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +ML + + +VFDG + K+ T + RR+KR ++ A L A +
Sbjct: 60 IKRFNMLKSFGVTPYLVFDGDSINVKQETNKKRREKRQENREIAMRLWQSGNKRNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VDVT +M VI C+ G+ IVAPFEAD QM YL G +I EDSDLLVFG
Sbjct: 120 QKCVDVTPEMVKCVIDYCKNNGIKYIVAPFEADPQMVYLEKKGLIQGIIAEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPS-ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
++++ KL+ G C + R+ K P+ + ++ + R M LSGCDY GI +GL K
Sbjct: 180 RRLVTKLNDFGECIEICRDSFGQLTSKFPIGQLSNEEIRMMVCLSGCDYTNGIPRIGLIK 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A V + + D L + GK + + F + + F +Q V+ P+SK++
Sbjct: 240 AIKLVMTHRNMD--RILMSLQTEGKFS----VPENFYDEYRYADYSFQFQRVFCPLSKQI 293
Query: 240 VPLNPL 245
V L +
Sbjct: 294 VSLTEI 299
>gi|255714619|ref|XP_002553591.1| KLTH0E02398p [Lachancea thermotolerans]
gi|238934973|emb|CAR23154.1| KLTH0E02398p [Lachancea thermotolerans CBS 6340]
Length = 665
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 137/257 (53%), Gaps = 16/257 (6%)
Query: 1 MKYIHMLLAH-KIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH 59
+K ++ML I +VFDG + K+ TE R++KR +K +A L +A +
Sbjct: 60 IKRLNMLRNRFNINPYLVFDGDAIMVKKDTELKRKQKRAENKERALALWKAGDKRQAYDY 119
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++ VDVT +MA VI+ C+ + + IVAPFEADAQM YL G +I+EDSDLL+FG
Sbjct: 120 FQKCVDVTPEMAKCVIEYCQVQDIKYIVAPFEADAQMVYLEKKGLVHGIISEDSDLLIFG 179
Query: 120 AKKIIYKLDLSG---NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+K+I KL G C D +LPS K PL++ + R M LSGCDY GI +G
Sbjct: 180 CRKLITKLTDHGEGIEICRDDFPRLPS--KFPLSQLCPEETRAMVCLSGCDYTAGIPKIG 237
Query: 177 LKKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
L A V MD +N R+ G +V + KEFL + + F +Q VY P
Sbjct: 238 LLTAMKLVRKHKTMDNIIKNIQRE-------GKFV-VPKEFLEEYQLASFAFQFQRVYCP 289
Query: 235 VSKEVVPLNPLESEMRD 251
+ + L+ + E+R+
Sbjct: 290 ENGMMTTLSEIPEELRN 306
>gi|118398554|ref|XP_001031605.1| XPG I-region family protein [Tetrahymena thermophila]
gi|89285936|gb|EAR83942.1| XPG I-region family protein [Tetrahymena thermophila SB210]
Length = 648
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 150/259 (57%), Gaps = 12/259 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ + ++ + I+ I+VFDGR+L AK+ T + R + ++ + KA EL+ +EA +
Sbjct: 90 LRIVRVVKLNGIEPIVVFDGRNLKAKDFTIKKREETKEKNLQKANELMEQGNKNEAIKYY 149
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ + V +M + I RA ++ +++P+EAD+Q+AYL + AD+ ITEDSDL+ +
Sbjct: 150 QRCLRVNKEMIYDTIDMLRANNIEYLISPYEADSQVAYLVKSQQADFAITEDSDLICYSC 209
Query: 121 KKIIYKLDLSGNCCFMD------REKLPS-ALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
KI++KL L +C ++D R L S AL+ L++ + Y+CI++G DY+ I+
Sbjct: 210 PKIVFKLSLDSSCQYLDLLKYCERSNLQSEALRCFLSQ-NELNRIYICIMAGSDYFPSIQ 268
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
G+G+KKA D + F+N ++K+ + KI I + + L+F YQ V+D
Sbjct: 269 GIGIKKAIDLFYRC--GTFKNVMQKLRLEPKIRPL--IPENYDMFVEKVALIFRYQRVFD 324
Query: 234 PVSKEVVPLNPLESEMRDE 252
+K+++ LNP+ + E
Sbjct: 325 MNTKQLITLNPVPEDFSQE 343
>gi|384248409|gb|EIE21893.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 347
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 7/245 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ + L + I++FDG LP K A E R + R + KA + A
Sbjct: 61 MQRVETLQQAGVSPIIIFDGGRLPMKSAEEGTRARSRSENLEKARAYWQAGNTTAAYESY 120
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ A +I+A +A V+ IVAP+EADAQMAYL I G VI+EDSD+L +G
Sbjct: 121 QRAVDISPATAKQLIEALKAANVEYIVAPYEADAQMAYLAINGIVQVVISEDSDMLAYGC 180
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ +K+D +G+ + LP L FT F MCIL+GCD+ + +G+KKA
Sbjct: 181 PRVFFKMDKNGDGQEICMADLPECRNPSLIGFTPDMFLEMCILAGCDFLKALSSIGIKKA 240
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ F + + G VK+ +E+ F F +Q VY P ++ VV
Sbjct: 241 HGHIRKYK--TFIRVCKSLRFSG-----VKVPREYEADFQRALWTFRHQRVYCPAARAVV 293
Query: 241 PLNPL 245
L PL
Sbjct: 294 HLRPL 298
>gi|300175407|emb|CBK20718.2| unnamed protein product [Blastocystis hominis]
Length = 383
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 12/275 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ + +VFDG LP K T E RR+ R + A + + EA + +++++
Sbjct: 15 LITEGLVPYVVFDGADLPIKGGTNESRREARQRNMEIAQQKEREGKIDEASDYFYRALEI 74
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + +I + R + +VAP+E+DAQ+ +L Y D VITED D LV+G +++++K
Sbjct: 75 SPDLYAPLIAQLKERNIQFLVAPYESDAQLGFLFRNNYIDLVITEDGDTLVYGCRRVLFK 134
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
LD G +D +L K+ +T F Y+C+LSGCDY ++G+G+ +A V
Sbjct: 135 LD-KGTGEEIDMSRLSHCTKLNFCDWTHDMFTYLCVLSGCDYLPSLRGIGIVRAYQAVSR 193
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLE 246
P ++ + ++ E+ F F +Q V+DP + VPL PL
Sbjct: 194 GRTP--------AGIFAYLRGVTEVPLEYENGFARAVFTFRHQTVFDPQRRAAVPLLPLP 245
Query: 247 SEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
+ ++ + + L LP D A ++A G +DP +
Sbjct: 246 ASLQAQPPAYLGPV---LPADLAVRIAAGEVDPVT 277
>gi|395327368|gb|EJF59768.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 326
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 138/253 (54%), Gaps = 14/253 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +L H I +VFDG LPAK+ TE +RR +R A+A L + A+
Sbjct: 60 MHRVRLLRHHGIAPFLVFDGGPLPAKKGTEAERRARRAEALARANALAAQGEHARARECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A R GV +VAP+EADAQ+AYL G D ++TEDSDLLVFG
Sbjct: 120 VKCVDVTPQMAYQLIKALRVEGVPYVVAPYEADAQLAYLERIGLVDGIMTEDSDLLVFGC 179
Query: 121 KKIIYKLD-LSGNCCFMDREKLPSALK-------MPLAKFTDAKFRYMCILSGCDYWTGI 172
K +++KLD + + R + + L ++DA+FR M ILSGCDY I
Sbjct: 180 KNVLFKLDPAAATVTHISRADFAAVASADGGGSGLSLLGWSDAQFRTMAILSGCDYLPSI 239
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
G+GLK A + EN + + + GK K+ K +L +F +F++Q VY
Sbjct: 240 PGIGLKTA--WALLRKHRTVENMVDALRLEGK----KKVPKGYLDAFRRAERVFMHQRVY 293
Query: 233 DPVSKEVVPLNPL 245
DP + +V L PL
Sbjct: 294 DPAQECLVYLTPL 306
>gi|224116484|ref|XP_002317312.1| predicted protein [Populus trichocarpa]
gi|222860377|gb|EEE97924.1| predicted protein [Populus trichocarpa]
Length = 398
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 7/253 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L + +K I+VFDG LP K E R + R + +A E + A
Sbjct: 60 MHRVNLLRHYGVKPILVFDGGLLPMKIEQENKRARTRKENLVRAIEHESNGNSAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ +A +IQ R V +VAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDISPSIAHELIQVLRQENVSYVVAPYEADAQMTFLSVCKQVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L + FT+ MCI SGCDY + GMGLK+A
Sbjct: 180 HRIIFKMDKYGQGVEFQNSRLQQNKDISFVGFTNEMLLEMCIFSGCDYQQSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ ++ + S V + + SF L F +Q VYDP K++V
Sbjct: 240 HALITKF--KSYDKVIKHLRY-----STVSVPPLYEESFKKAILTFRHQRVYDPTMKDIV 292
Query: 241 PLNPLESEMRDEV 253
L+ L + +++
Sbjct: 293 HLSDLPDNIGNDL 305
>gi|342182627|emb|CCC92106.1| putative exonuclease [Trypanosoma congolense IL3000]
Length = 783
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 19/255 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS------ 54
M + +LL I ++VFDG +P K EE+R+ RD H +A L +L G+
Sbjct: 84 MSRVDLLLKCGIHPVLVFDGAEIPMKRGKEEERKGNRDKHLIEA--LALLGNGNAPCTKS 141
Query: 55 ---EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITE 111
E + L + +D+T ++A VI + R ++CIVAP+EADAQ+AYL GY VI+E
Sbjct: 142 VQQEITALLEKGMDITTELAHAVILVLQERRLECIVAPYEADAQLAYLCKQGYVQAVISE 201
Query: 112 DSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG 171
DSDL+ + +I KLD GNC + + +P K + + F CI+SGCDY
Sbjct: 202 DSDLIAYQCPYLIAKLDHQGNCQVISAQDIPRCPK--FQRLSYESFLVGCIMSGCDYLPS 259
Query: 172 IKGMGLKKAKDYVFSIM-DPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
++ +G+KKA F+++ D L +I + K G + +E+ F++
Sbjct: 260 LRLIGIKKA----FALVRQADSVRGLMQI-LETKFGFAREELREYEPGLQRAFYCFVHHI 314
Query: 231 VYDPVSKEVVPLNPL 245
VYDP +++V L PL
Sbjct: 315 VYDPRKRKLVTLTPL 329
>gi|209878504|ref|XP_002140693.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556299|gb|EEA06344.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 496
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 136/248 (54%), Gaps = 17/248 (6%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS------EAQ 57
+++L + I + +FDG LP K TEE+R KR K ELL L++ E +
Sbjct: 63 VNLLKSKGIIPVCIFDGAPLPMKRVTEEERHMKRLEAKK---ELLQLEKSRKCSNSYEIR 119
Query: 58 SHLRQSVDVTHKMALNVIQACR-ARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
+ ++++D+T +A VI+ R G++CIVAP+EADAQ++YL GY D VITEDSD+L
Sbjct: 120 NLCQRALDITPDIAHQVIEELRDHHGIECIVAPYEADAQLSYLCRTGYVDAVITEDSDML 179
Query: 117 VFGAKKIIYKL-DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
VFG+ IYK D +G C + LP + + FT F C L+GCDY +G+
Sbjct: 180 VFGSPCTIYKHDDKTGICRVIYWGDLPRSGILRQNIFTYEMFVLGCTLTGCDYVKSPQGV 239
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
G+K A V D E + ++ GK ++ ++ + + F +Q VYDP
Sbjct: 240 GIKTAMKLVQEYYG-DLERIILQLQTIGK-----NVSSDYSINVQKALITFFHQTVYDPP 293
Query: 236 SKEVVPLN 243
S+++VPL+
Sbjct: 294 SQKLVPLS 301
>gi|298708478|emb|CBJ30602.1| exonuclease [Ectocarpus siliculosus]
Length = 722
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 149/288 (51%), Gaps = 11/288 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ +H+LL+H +K +VFDG HLPAK EE+RR +R+S+ + +L+ S A
Sbjct: 60 VERVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLMREGNPSGAHQFF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ DVT MA VI+ R GV +VAP+EADAQ+ +L G+ D VITEDSD+++FG
Sbjct: 120 CKAADVTPFMAHQVIK--RIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGC 177
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
++++KLD G +D ++ S ++ + + +C LSGCDY + GMGLK
Sbjct: 178 TRVVFKLDRDGTGQEVDLREVFSRRNDELDMRGMNEDDLMTLCALSGCDYLPSVHGMGLK 237
Query: 179 KAKDYVFSIMDPDFENA------LRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
KA V + A L KI K S + + F L F +Q +
Sbjct: 238 KAYRMVSRHKEASAIAANPAIIWLPKILRAVKFDSAGSFPRGYEADFQRALLTFRHQRAF 297
Query: 233 DPVSKEVVPLNPLESEMRDEVFSQLSLKELEL-PKDQAFQLALGNLDP 279
DPVS+ VV + PL + + + S + P+D AL L P
Sbjct: 298 DPVSRSVVHMTPLPEILPSAITTAPSAANDGMGPRDLDRAAALAFLGP 345
>gi|241955293|ref|XP_002420367.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
gi|223643709|emb|CAX41445.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
Length = 715
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 127/252 (50%), Gaps = 8/252 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML I VFDG LP K+ T +R+ KR K A + + + A
Sbjct: 60 LNKIQMLNHFGITPYFVFDGASLPTKQETNRERQLKRQEAKELAEKYIAANNQKLAYKQY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +V+ + IVAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGVVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
KK+I KL G C ++R+K ++P L ++ + R + +LSGCDY G+ G+GL+
Sbjct: 180 KKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLRT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A V +F L + GK KI F+ NL F +Q V+DP ++++
Sbjct: 240 AFQLVRKYN--NFTKVLIALRSMGK-----KIPDNFIDEVKLANLAFQFQKVFDPTNQKL 292
Query: 240 VPLNPLESEMRD 251
LN R+
Sbjct: 293 TTLNEYPQNNRE 304
>gi|302678463|ref|XP_003028914.1| hypothetical protein SCHCODRAFT_59252 [Schizophyllum commune H4-8]
gi|300102603|gb|EFI94011.1| hypothetical protein SCHCODRAFT_59252 [Schizophyllum commune H4-8]
Length = 277
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 134/264 (50%), Gaps = 26/264 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + ++ +VFDG LPAK+ TE +R +K + A+A L + S+A+
Sbjct: 35 MHCVRMLRHNGVEPYIVFDGGPLPAKKGTENERGQKWEESLARANMLAAQGKHSQARDQ- 93
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
VI+A R V +VAP+EADAQ+A+L G ++TEDSDLLVFG
Sbjct: 94 -------------VIKALRIENVKYVVAPYEADAQLAFLERTGAVHAILTEDSDLLVFGC 140
Query: 121 KKIIYKLDLSGNCCFM-----DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
K I++KLD C + D + + + L +TDA+FR M ILSGCDY I G+
Sbjct: 141 KNILFKLD-HAQCTVVSISRSDFASVTACNGVSLVGWTDAQFRTMAILSGCDYLPSIPGI 199
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GLK A YV E ++ I GK +I +++ F FL+Q VYDP
Sbjct: 200 GLKTAGVYVRR--HKTAEQCVKVIAREGK----KRIPMGYVSRFKLAEQCFLHQRVYDPA 253
Query: 236 SKEVVPLNPLESEMRDEVFSQLSL 259
E++ L + +E S + L
Sbjct: 254 RDELIHLTDIGDNWTEEADSYVGL 277
>gi|313229440|emb|CBY24027.1| unnamed protein product [Oikopleura dioica]
Length = 458
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 124/250 (49%), Gaps = 10/250 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L H I I VFDG LP+K+AT + RR +R+ ++ +A + L G A ++
Sbjct: 63 LKRLELLKKHNITPICVFDGEKLPSKKATNDQRRARREENRQRA--ITALKNGESAWNYF 120
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q++ ++ + V C+ +G I AP+EADAQ+A+L+ D VITEDSDL +FG
Sbjct: 121 IQAIRISPAITQGVKNMCKEKGYMVITAPYEADAQLAWLSREKRVDAVITEDSDLFIFGT 180
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA--KFRYMCILSGCDYW-TGIKGMGL 177
++I KL G C +D ++ + L KF D FRY CI+ GCDY+ GI G GL
Sbjct: 181 NRLITKLQDDGKCQIVDLARIDKVKE--LEKFDDKLRWFRYACIMQGCDYFPKGIPGFGL 238
Query: 178 KKAKDYV---FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
K + + F D + K + Y K F YQ + D
Sbjct: 239 KTSVKLLLRAFEQNDHSLRAIMDKKDSYFNSKQLAKWEANMAEKIVQAEDTFYYQLIVDT 298
Query: 235 VSKEVVPLNP 244
+K V P P
Sbjct: 299 KNKTVKPFQP 308
>gi|68478167|ref|XP_716825.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
gi|68478288|ref|XP_716765.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438448|gb|EAK97778.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438510|gb|EAK97839.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
Length = 699
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 127/249 (51%), Gaps = 18/249 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML I VFDG LP K+ T +R+ KR K A + + + A
Sbjct: 60 LNKIQMLNHFGITPYFVFDGASLPTKQETNRERQLKRQEAKELAEKYIAANNRKLAYKQF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +V+ + IVAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGIVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
KK+I KL G C ++R+K ++P L ++ + R + +LSGCDY G+ G+GLK
Sbjct: 180 KKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYV-----KITKEFLTSFHNTNLMFLYQPVYDP 234
A F + +RK N + KI + KI F NL F +Q V+DP
Sbjct: 240 A----FQL--------VRKYNNFTKIMIALRSMGKKIPDTFSDEVKLANLAFQFQKVFDP 287
Query: 235 VSKEVVPLN 243
S+++ LN
Sbjct: 288 TSQKLTTLN 296
>gi|145341014|ref|XP_001415611.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575834|gb|ABO93903.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 330
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 119/237 (50%), Gaps = 17/237 (7%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
++ I VFDG LP K E RR+ R AKA S A ++VD+T +MA
Sbjct: 72 VRAIYVFDGGRLPGKANEEAQRRRNRSEALAKAKAHARQGNASAANDFYVRAVDITPEMA 131
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
VI+A G + + AP+EADAQMAYL G+ VITEDSDL+ G + + K+ G
Sbjct: 132 REVIEALAREGFESLTAPYEADAQMAYLVKNGFVAGVITEDSDLIAHGCRSVFTKMAGDG 191
Query: 132 NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ + E+L + FT F MC+LSGCDY + G+G+KKA +
Sbjct: 192 SGIEIRFEELGRNRGLSFVGFTPDMFLEMCVLSGCDYLPSLNGVGVKKAHSLI------- 244
Query: 192 FENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
R+ Y K+ ++K + K++ + F + L F Y VY P +E+V LN
Sbjct: 245 -----RRFKTYNKVLRHMKFEGIAVPKDYESRFVDALLTFKYSWVYCPQRREIVNLN 296
>gi|238882475|gb|EEQ46113.1| hypothetical protein CAWG_04457 [Candida albicans WO-1]
Length = 699
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 127/249 (51%), Gaps = 18/249 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML I VFDG LP K+ T +R+ KR K A + + + A
Sbjct: 60 LNKIQMLNHFGITPYFVFDGASLPTKQETNRERQLKRQEAKELAEKYIAANNRKLAYKQF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +V+ + IVAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGIVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
KK+I KL G C ++R+K ++P L ++ + R + +LSGCDY G+ G+GLK
Sbjct: 180 KKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYV-----KITKEFLTSFHNTNLMFLYQPVYDP 234
A F + +RK N + KI + KI F NL F +Q V+DP
Sbjct: 240 A----FQL--------VRKYNNFTKIMIALRSMGKKIPDTFSDEVKLANLAFQFQKVFDP 287
Query: 235 VSKEVVPLN 243
S+++ LN
Sbjct: 288 TSQKLTTLN 296
>gi|449439699|ref|XP_004137623.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 577
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 179/348 (51%), Gaps = 22/348 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I++L ++I ++VFDG ++P K T ++R +K++ ++ A E L + A
Sbjct: 63 MHRINLLRHYEIVPVVVFDGGNIPCKAVTHQERHRKKEKNRELAMEKLKEGNVNAASELF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN----IAGYADYVITEDSDLL 116
+++V++T +A +I+ R ++ +VAP+EADAQ+AYL+ + G VITEDSD++
Sbjct: 123 QRAVNITPSIANQLIKLLREHDIEFVVAPYEADAQLAYLSSLGTLNGGIAAVITEDSDMI 182
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKL-PSALKMPLAK-FTDAKFRYMCILSGCDYWTGIKG 174
+G K I+K+D GN M +K+ SA P K F MC+L+GCD+ + G
Sbjct: 183 AYGCKATIFKMDRYGNGEEMMLDKIFDSAGCTPSFKDFDKELLTGMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ +A Y + E AL + K+ ++ +++ F +F + +YD
Sbjct: 243 IGIARA--YALVSKYRNLERALSAL----KLQKKEQMPEDYFKLFRQAMAVFQHAKIYDA 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD--- 291
+++++P+ PL E+ + ++ ++P A +A G L+P ++E + ++ +
Sbjct: 297 ETRKLIPMKPLPLELLQVLGEEIDFLGPDMPPSIAVSIAEGRLNPVTMEAFNYFSSEECN 356
Query: 292 ------SEENLPVTSIWSKQYEKPCDRHSSEESVSEPPVFQKLKPVAS 333
++E LP T E+ C ++ P +K+KPVA
Sbjct: 357 QDLIIKNKEILPRTEKAEVSEEESCFMVVGKDRERHIPD-KKIKPVAG 403
>gi|365761388|gb|EHN03046.1| Din7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 430
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 129/247 (52%), Gaps = 13/247 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I L I+ +VFDG L K TE R++KR ++ A +L A +
Sbjct: 60 IKKIQQLKRLNIEPYIVFDGDSLLVKSHTEARRKRKRLENEVIAKKLWSAGDKFNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA +I C+ + +VAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDVTPEMAKCIIDYCQTHSIPYVVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + R SAL PL K ++ +FR + L+GCDY +GI +GL
Sbjct: 180 KTLITKLNDHGEALEISRNNF-SALPENFPLGKLSEQQFRNLVCLAGCDYTSGIWKVGLT 238
Query: 179 KAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
A V +S M + L +I K +++K F + N FLYQ V+ P S
Sbjct: 239 TAMKIVKQYSAM----ADILTQIERTEKF----RLSKTFKQEVESANYTFLYQRVFCPSS 290
Query: 237 KEVVPLN 243
++ LN
Sbjct: 291 NKITTLN 297
>gi|297844758|ref|XP_002890260.1| hypothetical protein ARALYDRAFT_889222 [Arabidopsis lyrata subsp.
lyrata]
gi|297336102|gb|EFH66519.1| hypothetical protein ARALYDRAFT_889222 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 166/335 (49%), Gaps = 28/335 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L ++I ++V DG ++P K AT ++R +KR ++ A L A
Sbjct: 63 MHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRKRKANFDAAMVKLKEGNVGAATELF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
+++V VT MA +IQ ++ V+ IVAP+EADAQ+AYL+ G VITEDSDLL
Sbjct: 123 QRAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLSSLELEHGGIAAVITEDSDLL 182
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G K +I+K+D G + + + A+ K F F MC+L+GCD+ + G
Sbjct: 183 AYGCKAVIFKMDRYGKGEELILDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITK------EFLTSFHNTNLMFLY 228
+G+ +A ++ K ++ S++K K ++ +SF +F +
Sbjct: 243 VGISRAHAFI------------SKYQSVERVLSFLKTKKGKLVPDDYSSSFTEAVSVFQH 290
Query: 229 QPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQW 288
+YD +K++ L PL + + QL +L A +A GN+DP ++E +++
Sbjct: 291 ARIYDFDAKKLKHLKPLSQNLLNLPVGQLEFLGPDLSPSVAAAVAEGNIDPITMEAFNRF 350
Query: 289 N-PDSEENLPVTSIWSKQYEKP---CDRHSSEESV 319
+ P + PV S ++ E C SEE +
Sbjct: 351 SVPRRQLQKPVRSFKEQEKESSFLVCSSSKSEERI 385
>gi|159488115|ref|XP_001702066.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271440|gb|EDO97259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 294
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ +LL + + I+VFDG LP K E++RR+ R +A + A +++
Sbjct: 63 VDLLLGNGVVPIVVFDGCRLPMKADEEDNRRRGRREALERARAHAESGNMAAANECYQRA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V++T MA VI+A R RGV C+VAP+EADAQ++YL + G V+TEDSD+L +G ++
Sbjct: 123 VNITPWMAKVVIEALRERGVRCLVAPYEADAQLSYLALRGEVHAVLTEDSDMLAYGCPRV 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YKLD +G+ + LP ++ +A F MCIL+GCD+ I G+G+KKA
Sbjct: 183 LYKLDRAGHGEEVLLADLPLVRELNMAGFDHDMLLQMCILAGCDFLPNISGVGIKKAHGL 242
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPL 242
+ DF +R + G + + F T +F +Q V+ P ++ + L
Sbjct: 243 IKK--HRDFVRVVRTLRFNG-----TTVPPNYEVRFQRTLWLFRHQRVFCPAARAMAHL 294
>gi|344231339|gb|EGV63221.1| PIN domain-like protein [Candida tenuis ATCC 10573]
Length = 673
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 127/245 (51%), Gaps = 9/245 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I+ML ++ MVFDG LP K AT ++R+++R+ +AKA E + A
Sbjct: 60 IKKINMLRHFGVEPYMVFDGASLPTKAATAKERKERREEAQAKADEYMKKGNKKLAWKEF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +M+ +V+ V +VAP+EAD QM YL GY D +I+EDSDLL+FG
Sbjct: 120 MKAAAVTSQMSKSVMVELDRMNVKYVVAPYEADPQMVYLEKKGYVDGIISEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+ +I KL+ G C + + + L FT + R + +LSGCDY G+ G+GLK
Sbjct: 180 RTLITKLNDFGECIEISKSNFSKVTTISGLDSFTPQQLRLVAMLSGCDYTKGVPGVGLKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKE-FLTSFHNTNLMFLYQPVYDPVSKE 238
A + V D L + GK K+ E F +L F YQ V++P +
Sbjct: 240 AFNLVKKYNQID--RVLMALRAEGK-----KLPPEGFEVELIKADLAFQYQKVFNPKDQT 292
Query: 239 VVPLN 243
+ LN
Sbjct: 293 LETLN 297
>gi|452819913|gb|EME26963.1| exonuclease 1 [Galdieria sulphuraria]
Length = 491
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 13/289 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ I MLL + + ++VFDG LP K TE RR+ R+ + K +L+ + + A
Sbjct: 60 IERIKMLLYYNVVPVVVFDGARLPVKSETEAIRRESREMYLEKGKKLMKEKKWTHAVECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V++T MA V Q G+ VAP+EADAQ+A+L D VITEDSDL+ +G
Sbjct: 120 QRAVNITPIMAHQVSQVLIEMGIAVTVAPYEADAQLAWLCFQNEVDAVITEDSDLIAYGV 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+IIYK+ SG+ + R+ L + + L+ FT + M I++GCD++ GI+G+G+KKA
Sbjct: 180 NRIIYKMGRSGDGFLISRKNLGALEGLALSYFTQDMLQLMSIIAGCDFFPGIRGLGIKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ V + L ++ + K ++ ++ + F YQ VYD +++V
Sbjct: 240 HEIVKRY------HTLDRVFWFLKNNPKFQVEQDDRERMAKALMTFKYQRVYDHRHQKLV 293
Query: 241 PL------NPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
L +PL M +V + L +P D +A G L P + E
Sbjct: 294 FLTQLRENDPLVHSMM-KVDANLEFLGPLIPDDIVQGIAQGRLHPCTWE 341
>gi|401841841|gb|EJT44166.1| DIN7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 430
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 13/247 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I L I+ +VFDG L K TE R++KR ++ A +L A +
Sbjct: 60 IKKIQQLKRLNIEPYIVFDGDSLLVKSHTEARRKRKRLENEVIAKKLWSAGDKFNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVDVT +MA +I C+ + +VAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDVTPEMAKCIIDYCQTHSIPYVVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + R SAL PL K ++ +FR + L+GCDY +GI +GL
Sbjct: 180 KTLITKLNDHGEALEISRNNF-SALPENFPLGKLSEQQFRNLVCLAGCDYTSGIWKVGLT 238
Query: 179 KAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
A V +S M + L +I K +++K F N FLYQ V+ P S
Sbjct: 239 TAMKIVKQYSAM----ADILTQIERTEKF----RLSKTFKQEVEFANYTFLYQRVFCPSS 290
Query: 237 KEVVPLN 243
++ LN
Sbjct: 291 NKITTLN 297
>gi|294925837|ref|XP_002779016.1| Exodeoxyribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239887862|gb|EER10811.1| Exodeoxyribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 329
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 126/248 (50%), Gaps = 11/248 (4%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
+L A +V++VFDG LPAK E++R+K+R + E + A+ ++ D
Sbjct: 70 LLSAGVAEVVLVFDGCPLPAKLGVEDERQKRRQEARELGLEYRKAGNHAAARKMFTRAAD 129
Query: 66 VTHKMALNVIQACRARG----VDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
VT MA +I R R V I+AP+EADAQ+AYL + G D VI+EDSDLL FG
Sbjct: 130 VTPDMAAELISLIRGRKFGPRVRWIIAPYEADAQLAYLALNGLVDAVISEDSDLLPFGCP 189
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
+IYKLDL + E P L+ L F F + C+L+GCDY + GMG KKA
Sbjct: 190 HVIYKLDLVAGSGPVVCEGNPDFLRT-LISFPQDSFLHYCVLAGCDYLPSVTGMGPKKAY 248
Query: 182 DYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVP 241
+V P + + G ++ + + F L F +Q V+ P S+ + P
Sbjct: 249 GFVLR-GGPSISRIMNLAQIAG-----LEFPEGYADMFERALLTFRHQTVWCPSSRRLRP 302
Query: 242 LNPLESEM 249
L ++ +M
Sbjct: 303 LLDVDEDM 310
>gi|66475418|ref|XP_627525.1| exonuclease i/din7p-like; xeroderma pigmentosum G N-region plus
xeroderma pigmentosum G I-region plus HhH2 domain
[Cryptosporidium parvum Iowa II]
gi|32398743|emb|CAD98703.1| XPG (rad-related) exonuclease, possible [Cryptosporidium parvum]
gi|46228981|gb|EAK89830.1| exonuclease i/din7p-like; xeroderma pigmentosum G N-region plus
xeroderma pigmentosum G I-region plus HhH2 domain
[Cryptosporidium parvum Iowa II]
Length = 482
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 146/279 (52%), Gaps = 12/279 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA---QSHL 60
I L + + VFDG LP K TEE+R K+R K + L + + +S
Sbjct: 63 IRTLQGKGLIPVCVFDGATLPMKRVTEEERSKRRSDAKREIIRLKSEKKSYSSYNMRSLC 122
Query: 61 RQSVDVTHKMALNVIQACRAR-GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++++D+T +A V++ R ++CIVAP+EADAQ++YL+ Y D VITEDSD+LVFG
Sbjct: 123 QKALDITPNIAHQVLEVLRDEYKIECIVAPYEADAQLSYLSRIKYIDAVITEDSDMLVFG 182
Query: 120 AKKIIYKL-DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ IYK D +GNC + + L + + F+ F CIL+GCDY +G+G+K
Sbjct: 183 SICTIYKYDDKTGNCRVIYWKDLYKSGVISQLMFSYETFVLGCILTGCDYVKSPQGVGIK 242
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + D E + ++ GK I + + N + F +Q VYDP+
Sbjct: 243 TAMKLVQE-CNADLERIILQLKDLGK-----DIPQSYAIDVQNAMITFFHQTVYDPIEGN 296
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNL 277
+VPL+ + + E+ + ++L + + + Q+ GNL
Sbjct: 297 MVPLSNSDRP-KSEIETNVTLDNVPIFIEFNNQMKQGNL 334
>gi|67609355|ref|XP_666944.1| XPG (rad-related) exonuclease [Cryptosporidium hominis TU502]
gi|54658021|gb|EAL36714.1| XPG (rad-related) exonuclease [Cryptosporidium hominis]
Length = 482
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 145/279 (51%), Gaps = 12/279 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA---QSHL 60
I L + + VFDG LP K TEE+R K+R K + L + + +S
Sbjct: 63 IRTLQGKGLIPVCVFDGATLPMKRVTEEERSKRRSDAKREIIRLKSEKKSYSSYNMRSLC 122
Query: 61 RQSVDVTHKMALNVIQACRAR-GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++++D+T +A V++ R ++CIVAP+EADAQ++YL+ Y D VITEDSD+LVFG
Sbjct: 123 QKALDITPNIAHQVLEVLRDEYKIECIVAPYEADAQLSYLSRIKYIDAVITEDSDMLVFG 182
Query: 120 AKKIIYKL-DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ IYK D +GNC + + L + + F+ F CIL+GCDY +G+G+K
Sbjct: 183 SICTIYKYDDKTGNCRVIYWKDLYKSGVISQLMFSYETFVLGCILTGCDYVKSPQGVGIK 242
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + D E + ++ GK I + N + F +Q VYDP+
Sbjct: 243 TAMKLVQE-CNADLERIILQLKDLGK-----DIPHSYAIDVQNAMITFFHQTVYDPIEGN 296
Query: 239 VVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNL 277
+VPL+ + + E+ + ++L + + + Q+ GNL
Sbjct: 297 MVPLSN-SDKPKSEIETNVTLDNVPIFIEFNNQMKQGNL 334
>gi|168002170|ref|XP_001753787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695194|gb|EDQ81539.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 130/258 (50%), Gaps = 17/258 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML ++ ++VFDG LP K E R + R + +A E L + A
Sbjct: 60 MHRVNMLRHFGLQPVLVFDGGGLPMKSDQEMKRARSRKENLERALEHERLGNFTAAMQCY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T +A +I+ R V+ +VAP+EADAQMA+L G+ D VITEDSDL+ +G
Sbjct: 120 QRAVDITPAIAFRLIKVLRQENVEYVVAPYEADAQMAFLARNGHVDLVITEDSDLIAYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+I +K+D G + + + F+ MCI+SGCDY + GMG+KKA
Sbjct: 180 PQIFFKMDKYGQGVGFQFSDITANKDIDFNNFSRQMILEMCIMSGCDYLPSLPGMGVKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYDPV 235
+++ Y K+ ++K I +++ F L F + VYDP
Sbjct: 240 ------------HGLMKRFKTYIKVMKHLKFSGVLIDEQYEQGFRRAILTFQHHRVYDPA 287
Query: 236 SKEVVPLNPLESEMRDEV 253
+ +V L + E+ +++
Sbjct: 288 KRAMVHLTDVPGELVNDL 305
>gi|355686743|gb|AER98170.1| exonuclease 1 [Mustela putorius furo]
Length = 668
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 120/209 (57%), Gaps = 6/209 (2%)
Query: 111 EDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWT 170
EDSDLL FG KK+I K+D GN +D+ +L ++ FT KFRYMCILSGCDY +
Sbjct: 1 EDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTQEKFRYMCILSGCDYLS 59
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
++G+GL KA + +PD +RKI Y K+ + + ++++ F N FLYQ
Sbjct: 60 SLRGIGLAKACKVLRLANNPDIVKVIRKIGHYLKMN--IIVPEDYIKGFIRANNTFLYQL 117
Query: 231 VYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
V+DP+ ++++PLN E ++ E S + + + A Q+ALGN D + E++D +NP
Sbjct: 118 VFDPIKRKLLPLNAYEDDIDPETLS-YAGQYFDDSDSIALQIALGNKDINTFEQIDDYNP 176
Query: 291 DSEENLPVTSIWSKQYEKPCDRHSSEESV 319
D+ +P S +K C + S+ S+
Sbjct: 177 DTA--MPAQSRSQSWNDKTCQKSSNFNSI 203
>gi|366992229|ref|XP_003675880.1| hypothetical protein NCAS_0C05260 [Naumovozyma castellii CBS 4309]
gi|342301745|emb|CCC69516.1| hypothetical protein NCAS_0C05260 [Naumovozyma castellii CBS 4309]
Length = 412
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 125/244 (51%), Gaps = 11/244 (4%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
IK ++FDG + K E R KR ++K +L + A ++SV++T +MA
Sbjct: 71 IKPYLIFDGDAILVKGEVESSRLNKRKTNKLMGEKLWRIGERKAATEFFQKSVNITTQMA 130
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
++I CR + +VAPFEAD+QM YL +I+EDSDL+VFG+K++I KL+ G
Sbjct: 131 KHIINYCRENSIQYVVAPFEADSQMVYLEKTVQVQGIISEDSDLIVFGSKRLITKLNEFG 190
Query: 132 NCCFM---DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIM 188
C + D L K P + + + R + LSGCDY GI +GL A V
Sbjct: 191 ECIEIASCDFGDLTG--KFPFGELSMDQIRMLVCLSGCDYTVGIWKIGLVTAIKLV---- 244
Query: 189 DPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESE 248
F+N +N + G Y + FL + N F YQ V+DP +V LN + +E
Sbjct: 245 -RQFDNMDDIVNHIKESGKY-SLNCNFLQEYKYANYSFQYQRVFDPKENRIVTLNRIPTE 302
Query: 249 MRDE 252
++++
Sbjct: 303 LKND 306
>gi|260943253|ref|XP_002615925.1| hypothetical protein CLUG_04807 [Clavispora lusitaniae ATCC 42720]
gi|238851215|gb|EEQ40679.1| hypothetical protein CLUG_04807 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 19/287 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK + ML ++ +VFDG LP KE T +RR+KR+ + AA L A
Sbjct: 60 MKKVDMLRHFGVEPYLVFDGAALPTKEGTLIERREKRERAREAAAALEKKGDRRGAWKEY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +V+ R V +VAP+EAD QM YL G D +++EDSDLLVFG
Sbjct: 120 MKAAAVTPEMAKSVMVELDRRRVKYVVAPYEADPQMVYLEQIGAVDAILSEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
++++ KL SG C ++R + +P LA +T A++R + ILSGCDY G+ G+GLK
Sbjct: 180 RRLVTKLSDSGGCVEINRARFSQVRAVPRLADYTPAQWRAVAILSGCDYTKGVPGVGLKT 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVK---ITKEFLTSFHNTNLMFLYQPVYDPVS 236
A F R +++ + SY++ + FL +L F +Q V+DP +
Sbjct: 240 A-----------FAAVSRTPSLHKIVLSYIEKGTVPPSFLQEAVRADLAFQFQKVFDPRA 288
Query: 237 KEVVPLN--PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
+ + LN P + E+ E+ + + LE + + G + PF+
Sbjct: 289 RALRTLNEYPPDFEVETEILEAVCGRTLE--EKIHVGICTGRIHPFT 333
>gi|149237665|ref|XP_001524709.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451306|gb|EDK45562.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 800
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 16/255 (6%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML +I VFDG L K T ++RRK R A A + L R A ++
Sbjct: 63 IAMLQDFQITPYFVFDGASLRTKAQTNDERRKSRKEALALAQQYAKLGRSDLAGKQYMKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VT +MA ++ + +VAP+EAD QM YL G D +++EDSDLL+FG +K+
Sbjct: 123 ACVTSQMAKLIMCELDLLKIKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCRKL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA-- 180
I KL C +DR + M L F++++ R +LSGCDY G++G+GLK +
Sbjct: 183 ITKLKDDSTCVEIDRHNFKNVANMSYLGNFSESQLRLAAMLSGCDYTKGVQGIGLKSSVQ 242
Query: 181 --KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
+ Y++ + + I GK+ + + +L F +Q V+DP S++
Sbjct: 243 LVRKYIY------LQKVILAIKASGKM-----VPDNLEDDIYRADLAFQFQKVFDPRSQK 291
Query: 239 VVPLNPLESEMRDEV 253
+ LN L E+ +V
Sbjct: 292 LTTLNELPEELEVDV 306
>gi|323450159|gb|EGB06042.1| hypothetical protein AURANDRAFT_29882, partial [Aureococcus
anophagefferens]
Length = 306
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 129/252 (51%), Gaps = 14/252 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +LL +K+K ++VFDG LPAK A E RR KR+ KA A++ D EA+
Sbjct: 60 MGRVALLLHYKVKPLLVFDGGALPAKAAQEASRRGKREHAKAMASQKAREDSHEEARKWY 119
Query: 61 RQSVDVTHKMALNVIQACRARG---VDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLV 117
+ VDVT MA ++ AC AR VD +VAP+EADAQ+A L +G A +++EDSD L
Sbjct: 120 AKCVDVTPVMAKQLVDACAARWGDRVDFLVAPYEADAQLAQLARSGEAAAIVSEDSDNLA 179
Query: 118 FGAKKIIYKLDLSGNCCFMDREKL----PSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+G ++++KLD G+ + L P + + +T F MC L+GCDY +K
Sbjct: 180 YGVPRVLFKLDADGSAQQVVLADLFAAGPGVNALDVRGWTQDMFVTMCALAGCDYVEAVK 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
G+G+K A V D + LR + ++ L F +Q VYD
Sbjct: 240 GVGIKNAHRLVARY--KDRKKVLRALRY-----ECAACPDDYEQRVDRAALTFGHQMVYD 292
Query: 234 PVSKEVVPLNPL 245
+ V L PL
Sbjct: 293 RRRRAAVHLAPL 304
>gi|340501880|gb|EGR28613.1| hypothetical protein IMG5_171750 [Ichthyophthirius multifiliis]
Length = 576
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 144/271 (53%), Gaps = 18/271 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
K I +L +KI+ I+VFDGR LPAK+ T + R + + A +L+ + E+ +
Sbjct: 60 FKIIKLLQFYKIEPIIVFDGRSLPAKDLTHKQRENTKQKNLDIANKLIEEGKKQESFKYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ + V KM VI + +++P+EADAQ+A++ G D +TEDSDL+ +G
Sbjct: 120 SRCLRVNKKMIYEVIDTLFHNKIKFVISPYEADAQIAFMVRKGITDAAVTEDSDLICYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLP-----------SALKMPLAKFTDAKFRYMCILSGCDYW 169
++I+KL L G+C ++D K +L+ LA+ + + +CI++G DY
Sbjct: 180 PRVIFKLKLDGSCEYLDLNKYTENQALRKTIQCESLRCFLAQSENNRI-LICIMAGSDYI 238
Query: 170 TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
I G+G+KKA D + + +F++ +RK+ V K I +++ +L+F +Q
Sbjct: 239 PSIHGIGIKKAIDLFYRL--NNFQSVMRKLRVELKFD----IPQKYEEMVQKVSLIFKHQ 292
Query: 230 PVYDPVSKEVVPLNPLESEMRDEVFSQLSLK 260
V+D K + +N L S+ + E Q+ +K
Sbjct: 293 LVFDFQEKILTYINELGSDFKKEDLRQIGIK 323
>gi|449503133|ref|XP_004161850.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 578
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 179/349 (51%), Gaps = 23/349 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKKRDSHKAKAAELLILDRGSEAQSH 59
M I++L ++I ++VFDG ++P K T ++R R K++ ++ A E L + A
Sbjct: 63 MHRINLLRHYEIVPVVVFDGGNIPCKAVTHQERHRYKKEKNRELAMEKLKEGNVNAASEL 122
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN----IAGYADYVITEDSDL 115
+++V++T +A +I+ R ++ +VAP+EADAQ+AYL+ + G VITEDSD+
Sbjct: 123 FQRAVNITPSIANQLIKLLREHDIEFVVAPYEADAQLAYLSSLGTLNGGIAAVITEDSDM 182
Query: 116 LVFGAKKIIYKLDLSGNCCFMDREKL-PSALKMPLAK-FTDAKFRYMCILSGCDYWTGIK 173
+ +G K I+K+D GN M +K+ SA P K F MC+L+GCD+ +
Sbjct: 183 IAYGCKATIFKMDRYGNGEEMMLDKIFDSAGCTPSFKDFDKELLTGMCVLAGCDFLPSVP 242
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
G+G+ +A Y + E AL + K+ ++ +++ F +F + +YD
Sbjct: 243 GIGIARA--YALVSKYRNLERALSAL----KLQKKEQMPEDYFKLFRQAMAVFQHAKIYD 296
Query: 234 PVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD-- 291
+++++P+ PL E+ + ++ ++P A +A G L+P ++E + ++ +
Sbjct: 297 AETRKLIPMKPLPLELLQVLGEEIDFLGPDMPPSIAVSIAEGRLNPVTMEAFNYFSSEEC 356
Query: 292 -------SEENLPVTSIWSKQYEKPCDRHSSEESVSEPPVFQKLKPVAS 333
++E LP T E+ C ++ P +K+KPVA
Sbjct: 357 NQDLIIKNKEILPRTEKAEVSEEESCFMVVGKDRERHIPD-KKIKPVAG 404
>gi|323334127|gb|EGA75511.1| Din7p [Saccharomyces cerevisiae AWRI796]
gi|323355597|gb|EGA87417.1| Din7p [Saccharomyces cerevisiae VL3]
Length = 383
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 130/247 (52%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L A +
Sbjct: 13 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYF 72
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 73 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 132
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +GI +G+
Sbjct: 133 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 191
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 192 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 245
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 246 ITTLNNI 252
>gi|349577319|dbj|GAA22488.1| K7_Din7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 430
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 131/247 (53%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L +A +
Sbjct: 60 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYKAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +GI +G+
Sbjct: 180 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 239 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 292
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 293 ITTLNNI 299
>gi|71423277|ref|XP_812404.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877180|gb|EAN90553.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 760
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 131/254 (51%), Gaps = 18/254 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS------ 54
M + ++L + ++VFDG +P K+ TE +R+ R + A+A L +L +G
Sbjct: 82 MGRVDLMLRCGVHPVLVFDGAPIPMKQGTEAERQMLRAARLAEA--LQVLKQGGPSNPRA 139
Query: 55 --EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITED 112
EA L + +D+T ++A VIQ + R ++CIVAP+EADAQ+AYL GY V++ED
Sbjct: 140 RQEAAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEADAQLAYLCKEGYVQAVVSED 199
Query: 113 SDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTG 171
SDL+ + +I KLD G C + + LP + P + F CILSGCDY
Sbjct: 200 SDLIAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGCILSGCDYLPS 256
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPV 231
++ +G+KKA + + +R + V K G + + F + V
Sbjct: 257 LRHIGVKKA--FRLVAQATSVPSIMRSLEV--KFGFSKEELDAYEAKLQQAFYCFAHHFV 312
Query: 232 YDPVSKEVVPLNPL 245
+DPV KEV+ L PL
Sbjct: 313 FDPVRKEVMHLTPL 326
>gi|71413355|ref|XP_808820.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873103|gb|EAN86969.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 762
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 131/254 (51%), Gaps = 18/254 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS------ 54
M + ++L + ++VFDG +P K+ TE +R+ R + A+A L +L +G
Sbjct: 82 MGRVDLMLRCGVHPVLVFDGAPIPMKQGTEAERQMLRAARLAEA--LQVLKQGGPSNPRA 139
Query: 55 --EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITED 112
EA L + +D+T ++A VIQ + R ++CIVAP+EADAQ+AYL GY V++ED
Sbjct: 140 RQEAAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEADAQLAYLCKEGYVQAVVSED 199
Query: 113 SDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTG 171
SDL+ + +I KLD G C + + LP + P + F CILSGCDY
Sbjct: 200 SDLIAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGCILSGCDYLPS 256
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPV 231
++ +G+KKA + + +R + V K G + + F + V
Sbjct: 257 LRHIGVKKA--FRLVAQATSVPSIMRSLEV--KFGFSKEELDAYEAKLQQAFYCFAHHFV 312
Query: 232 YDPVSKEVVPLNPL 245
+DPV KEV+ L PL
Sbjct: 313 FDPVRKEVMHLTPL 326
>gi|323309724|gb|EGA62931.1| Din7p [Saccharomyces cerevisiae FostersO]
Length = 408
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 130/247 (52%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L A +
Sbjct: 38 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYF 97
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 98 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 157
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +GI +G+
Sbjct: 158 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 216
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 217 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 270
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 271 ITTLNNI 277
>gi|323305497|gb|EGA59240.1| Din7p [Saccharomyces cerevisiae FostersB]
Length = 430
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 130/247 (52%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L A +
Sbjct: 60 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +GI +G+
Sbjct: 180 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 239 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 292
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 293 ITTLNNI 299
>gi|398366335|ref|NP_010549.3| Din7p [Saccharomyces cerevisiae S288c]
gi|2501673|sp|Q12086.1|DIN7_YEAST RecName: Full=DNA damage-inducible protein DIN7
gi|1134889|emb|CAA92581.1| unknown [Saccharomyces cerevisiae]
gi|1143552|emb|CAA62233.1| DIN7 protein [Saccharomyces cerevisiae]
gi|1226039|emb|CAA94102.1| Din7p [Saccharomyces cerevisiae]
gi|151942240|gb|EDN60596.1| DNA damage-inducible protein [Saccharomyces cerevisiae YJM789]
gi|190404789|gb|EDV08056.1| DNA damage-inducible protein DIN7 [Saccharomyces cerevisiae
RM11-1a]
gi|259145501|emb|CAY78765.1| Din7p [Saccharomyces cerevisiae EC1118]
gi|285811283|tpg|DAA12107.1| TPA: Din7p [Saccharomyces cerevisiae S288c]
gi|365766343|gb|EHN07841.1| Din7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300379|gb|EIW11470.1| Din7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 430
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 130/247 (52%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L A +
Sbjct: 60 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +GI +G+
Sbjct: 180 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 239 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 292
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 293 ITTLNNI 299
>gi|344301703|gb|EGW32008.1| hypothetical protein SPAPADRAFT_50611 [Spathaspora passalidarum
NRRL Y-27907]
Length = 638
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 125/246 (50%), Gaps = 18/246 (7%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML + VFDG LP K T +R KR + +A + + A ++
Sbjct: 63 IDMLKYFGVTPYFVFDGAPLPTKSETNLERSTKRKQARKQAEMYMKQGKTKLAFKEFMKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VTH MA +++ G+ +VAP+EAD QM YL G D +++EDSDLLVFG K++
Sbjct: 123 ASVTHAMAKSIMVELDNLGIKYVVAPYEADPQMVYLEKIGVVDGILSEDSDLLVFGCKRL 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
I KL G+C ++R+ +P L+ +T + R + +LSGCDY G+ G+G+K A
Sbjct: 183 ITKLKDDGSCVEINRDDFGKVRSIPYLSSYTPEQLRLVAMLSGCDYTKGVNGIGIKSA-- 240
Query: 183 YVFSIMDPDFENALRKINVYGKI-----GSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
F++ +RK N KI ++ + F + NL F YQ V+ P +
Sbjct: 241 --FTL--------VRKYNNLDKIIVALQSDGKQVPEGFRDEVDSANLAFQYQKVFHPQLQ 290
Query: 238 EVVPLN 243
+++ LN
Sbjct: 291 KLMTLN 296
>gi|255639461|gb|ACU20025.1| unknown [Glycine max]
Length = 287
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 118/234 (50%), Gaps = 7/234 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L K I+VFDG LP K E R + R + A+A E + A
Sbjct: 60 MHRVNLLRHFGDKPILVFDGGLLPMKSEQENKRARARKDNLARAVEHESDGNLAAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ ++A +IQ + + IVAP+EADAQM +L I+G D VITEDSDL+ FG
Sbjct: 120 QKAVDISPQIACELIQVLKQENLQYIVAPYEADAQMTFLAISGQVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G L ++ F MCILSGCDY + GMGLK+A
Sbjct: 180 PRIIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLSGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+ ++ L+ + G V + + SF L F YQ VYDP
Sbjct: 240 HASIKKFR--SYDKVLKHLRYSG-----VSVPPFYEESFKKAILTFRYQRVYDP 286
>gi|302308357|ref|NP_985242.2| AER387Cp [Ashbya gossypii ATCC 10895]
gi|299789416|gb|AAS53066.2| AER387Cp [Ashbya gossypii ATCC 10895]
gi|374108467|gb|AEY97374.1| FAER387Cp [Ashbya gossypii FDAG1]
Length = 655
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQS--HLRQSVDVT 67
+ I+ +VFDG + K TE R +KR +A+A +L ++G +S + ++ VD+T
Sbjct: 70 YDIEPYLVFDGAGIKVKAGTEAKRHEKRAESRARAIDLW--EKGERRKSFEYFQKCVDIT 127
Query: 68 HKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKL 127
+M +I C G +VAP+EAD Q+ YL +G +I+EDSDLLVFG +++I KL
Sbjct: 128 PEMTKVIIDYCIGAGFKYVVAPYEADPQLVYLEKSGLVQGIISEDSDLLVFGCRRLITKL 187
Query: 128 DLSG---NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+ G C D LP K PL ++ R M L+GCDY GI +GL A V
Sbjct: 188 NDYGEGFEICRDDFVHLPD--KFPLNSLGESGLRTMVCLAGCDYTKGIPQVGLLTAVKLV 245
Query: 185 FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP 244
+ + L I GK K+ EFL + +L F +Q VY P+ ++ LN
Sbjct: 246 --VKHKTMDQILLTIKREGKW----KVPAEFLDEYRFADLAFQFQRVYCPLKNQLTTLNE 299
Query: 245 LESEMRDE 252
+ S +R++
Sbjct: 300 VPSTLRED 307
>gi|407867753|gb|EKG08658.1| hypothetical protein TCSYLVIO_000184 [Trypanosoma cruzi]
Length = 761
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 130/254 (51%), Gaps = 18/254 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS------ 54
M + ++L + ++VFDG +P K+ TE +R+ R + A+A L +L +G
Sbjct: 82 MGRVDLMLRCGVHPVLVFDGAPIPMKQGTEAERQMLRAARLAEA--LQVLKQGGPSNPRA 139
Query: 55 --EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITED 112
EA L + +D+T ++A VIQ + R ++CIVAP+EADAQ+AYL GY V++ED
Sbjct: 140 RQEAAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEADAQLAYLCKEGYVQAVVSED 199
Query: 113 SDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTG 171
SDL+ + +I KLD G C + + LP + P + F CILSGCDY
Sbjct: 200 SDLIAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGCILSGCDYLPS 256
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPV 231
++ +G+KKA V +R + V K G + + F + V
Sbjct: 257 LRHIGVKKAFRLVAQATSVPI--IMRSLEV--KFGFSKEELDAYEAKLQQAFYCFAHHFV 312
Query: 232 YDPVSKEVVPLNPL 245
+DPV KEV+ L PL
Sbjct: 313 FDPVRKEVMHLTPL 326
>gi|403224257|dbj|BAM42387.1| uncharacterized protein TOT_040000754 [Theileria orientalis strain
Shintoku]
Length = 1042
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 150/317 (47%), Gaps = 60/317 (18%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG---SEAQSHL 60
+ +LL++ I IMVFDG +PAK+A RR++R+ K +A E++ ++ +E
Sbjct: 396 LSLLLSYNITPIMVFDGYEMPAKKAENMMRRERREKAKKEALEMIAKNKNKINTEIMKKC 455
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q++ +T ++ VI C+ V IV+PFEADAQ++YL +G AD I+EDSDL+V+G
Sbjct: 456 MQAIHITPEIIYRVISVCKKINVAVIVSPFEADAQVSYLCRSGIADIAISEDSDLVVYGC 515
Query: 121 KKIIYKLDLSG-----NCCFMDREKLPSALKMPLAKF----------------------- 152
KIIYKLD G N F + P K KF
Sbjct: 516 PKIIYKLDKEGKGVELNVPFNAFKAAPGPKKRKEVKFEKPEERSGEESMDLDSKDEEEKH 575
Query: 153 --------TDAK---------FRYMCILSGCDYWTG--IKGMGLKKAKDYVFSIMDPDFE 193
DA+ F MC+LSG DY G I GMGLK A Y + E
Sbjct: 576 TNKSDYAEKDARIFKGLNHRMFVVMCVLSGTDYDDGYHINGMGLKVA--YRLILEHERLE 633
Query: 194 NALRKINVYGKIGSYVKITK--EFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRD 251
L+ + K S + K + L + N +FL+ V+DP +++ +NP+ +
Sbjct: 634 GVLKSVYEDAKWSSKLAEYKFEDILLHYENVCKIFLHNIVFDPKKHQLIHINPISN---- 689
Query: 252 EVFSQLSLKELELPKDQ 268
+S +LEL K++
Sbjct: 690 --LDNMSTNKLELLKEE 704
>gi|397588883|gb|EJK54438.1| hypothetical protein THAOC_25932, partial [Thalassiosira oceanica]
Length = 880
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 119/240 (49%), Gaps = 14/240 (5%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
I V++V DG LP+K+ RR +RD +A G A+ Q+ +T +
Sbjct: 276 INVLLVIDGDSLPSKKEENLQRRAERDRAYDRAVAAEGARDGRAARRFYAQACSITQGIK 335
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL-- 129
+I+ CR RG+ +VAP+EADAQMA L G D VITEDSD+LV+G +++YK D
Sbjct: 336 HGLIEECRGRGIPFLVAPYEADAQMARLAHTGAVDLVITEDSDMLVYGCPRVLYKADFKT 395
Query: 130 -SGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIM 188
G + R+ L + FT F +M ILSGCDY G+ G+G+K A V
Sbjct: 396 GQGQEIQLMRD-LGENVSPSFRNFTHDMFVFMAILSGCDYCKGVPGIGIKLAHKLVRVHR 454
Query: 189 DPD-FENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLES 247
P NALR ++ ++F F F +Q V+ P + V PL P+ S
Sbjct: 455 TPSKIFNALRTAG---------RMPRDFEDCFWKAYRTFRHQRVFCPSKQVVEPLWPIPS 505
>gi|207346529|gb|EDZ73002.1| YDR263Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 430
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 129/247 (52%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L +
Sbjct: 60 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNVMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +GI +G+
Sbjct: 180 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 239 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 292
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 293 ITTLNNI 299
>gi|72392705|ref|XP_847153.1| exonuclease [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359240|gb|AAX79683.1| exonuclease, putative [Trypanosoma brucei]
gi|70803183|gb|AAZ13087.1| exonuclease, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 797
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 144/276 (52%), Gaps = 31/276 (11%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +LL + +K ++VFDGR LP K EE+RR+ R H ++A +LL R S
Sbjct: 84 MSQVELLLRYGVKPVLVFDGRELPMKREEEEERRRNRIKHLSEALDLL--RRNSRPTPSE 141
Query: 61 RQSV--------DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITED 112
R+ + D+T ++A VI + R ++CIVAP+EADAQ+AYL Y D VITED
Sbjct: 142 RKDIAGLVERGMDITTELAHAVIMMLQERQLECIVAPYEADAQLAYLCQQRYVDAVITED 201
Query: 113 SDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYWTG 171
SDLLV+ ++I KLD G+C ++ E S L PL K + F CILSGCDY
Sbjct: 202 SDLLVYWCPRLIAKLDHKGSCQVIEVE---SVLHCPLFKGLSYNSFLVGCILSGCDYLPN 258
Query: 172 IKGMGLKKAKDYVFSIMD-----PDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMF 226
++ +G+KKA F IM PD L + G + +++ F
Sbjct: 259 LRHIGVKKA----FGIMSEARSVPDVIRLLEE-----NYGFPREQLRKYEAGLQRAIYCF 309
Query: 227 LYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKEL 262
L+ V+DPV + +V PL + + F Q L EL
Sbjct: 310 LHHIVFDPVKRALVTRTPLPNGV---AFKQSILGEL 342
>gi|9719724|gb|AAF97826.1|AC034107_9 Contains similarity to exonuclease ExoI from Xenopus laevis
gb|AF134570 and contains XPG N-terminal PF|00752 and
I-region PF|00867 domains. EST gb|AV565414 comes from
this gene [Arabidopsis thaliana]
Length = 567
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 12/295 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L ++I ++V DG ++P K AT ++R +KR ++ A L + A
Sbjct: 53 MHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRKRKANFDAAMVKLKEGNVAAATELF 112
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
+++V VT MA +IQ ++ V+ IVAP+EADAQ+AYL+ G VITEDSDLL
Sbjct: 113 QRAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLSSLELEQGGIAAVITEDSDLL 172
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G K +I+K+D G + + + A+ K F F MC+L+GCD+ + G
Sbjct: 173 AYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPSVPG 232
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ +A ++ + + K GK+ + ++ +SF +F + VYD
Sbjct: 233 VGISRAHAFISKYQSVELVLSFLKTK-KGKL-----VPDDYSSSFTEAVSVFQHARVYDF 286
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
+K++ L PL + + QL +L A +A GN+DP +++ + ++
Sbjct: 287 DAKKLKHLKPLSHNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 341
>gi|18394573|ref|NP_564047.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|15215782|gb|AAK91436.1| At1g18090/T10F20_6 [Arabidopsis thaliana]
gi|21360461|gb|AAM47346.1| At1g18090/T10F20_6 [Arabidopsis thaliana]
gi|332191553|gb|AEE29674.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 577
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 12/295 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L ++I ++V DG ++P K AT ++R +KR ++ A L + A
Sbjct: 63 MHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRKRKANFDAAMVKLKEGNVAAATELF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
+++V VT MA +IQ ++ V+ IVAP+EADAQ+AYL+ G VITEDSDLL
Sbjct: 123 QRAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLSSLELEQGGIAAVITEDSDLL 182
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G K +I+K+D G + + + A+ K F F MC+L+GCD+ + G
Sbjct: 183 AYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ +A ++ + + K GK+ + ++ +SF +F + VYD
Sbjct: 243 VGISRAHAFISKYQSVELVLSFLKTK-KGKL-----VPDDYSSSFTEAVSVFQHARVYDF 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
+K++ L PL + + QL +L A +A GN+DP +++ + ++
Sbjct: 297 DAKKLKHLKPLSHNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 351
>gi|308799503|ref|XP_003074532.1| exonuclease, putative; 92014-93872 (ISS) [Ostreococcus tauri]
gi|116000703|emb|CAL50383.1| exonuclease, putative; 92014-93872 (ISS) [Ostreococcus tauri]
Length = 1004
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
++ + VFDG LP K A E RR+ R KA S A ++VDVT +MA
Sbjct: 72 VEAVFVFDGGRLPGKAAEEAQRRRNRREALDKAKTHARNGNASAANECYVRAVDVTPEMA 131
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
VI+A G +C+ AP+EADAQMAYL G+ VITEDSDL+ G K + K+ G
Sbjct: 132 REVIEALEREGFECLTAPYEADAQMAYLVKHGFVSAVITEDSDLIAHGCKSVFTKMSPDG 191
Query: 132 NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ + E+L M FT F MC+LSGCDY + G+GLKKA +
Sbjct: 192 SGIEIRFEELGKNRGMSFVGFTPQMFLEMCVLSGCDYLPSLAGVGLKKAHSLI------- 244
Query: 192 FENALRKINVYGKIGSYVKI 211
R+ Y K+ ++K
Sbjct: 245 -----RRFKTYNKVLRHMKF 259
>gi|448531667|ref|XP_003870300.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis Co 90-125]
gi|380354654|emb|CCG24170.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis]
Length = 717
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 126/254 (49%), Gaps = 8/254 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I ML I VFDG L K+ T RR+ R K A + R A
Sbjct: 60 LNRIQMLQYFGITPFFVFDGASLSTKQETNLKRRESRSEAKKLAEKYAASGRLQFAYKEY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VT +MA +++ + +VAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 120 MKAAYVTSQMAKSIMCELDVMNIRYVVAPYEADPQMVYLEKIGIVDGILSEDSDLLIFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
K+I KL +C ++R+ ++P LA +T + R + +LSGCDY GI G+GLK
Sbjct: 180 NKLITKLKDDSSCVEINRDDFNKVRQIPYLASYTSEQLRLVAMLSGCDYTKGIPGVGLKS 239
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
A V + L K+ + + + KI +F NL F +Q V+DP ++ +
Sbjct: 240 AFQMVRRY------HTLHKVTIALR-STGKKIPVDFEDEVLKANLAFQFQKVFDPRNQSL 292
Query: 240 VPLNPLESEMRDEV 253
LN + + ++V
Sbjct: 293 TTLNEVPQSISEQV 306
>gi|407394233|gb|EKF26855.1| hypothetical protein MOQ_009436 [Trypanosoma cruzi marinkellei]
Length = 772
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 129/251 (51%), Gaps = 18/251 (7%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--------E 55
+ ++L + ++VFDG +P K+ TE +R+ R + A+A L +L +G E
Sbjct: 85 VDLMLRCGVHPVLVFDGASIPMKQGTEAERQMLRAARLAEA--LQVLKQGGPSNPRARQE 142
Query: 56 AQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
A L + +D+T ++A VIQ + R ++CIVAP+EADAQ+AYL GY V++EDSDL
Sbjct: 143 AAQLLEKGMDITTELAHAVIQVLKERRLECIVAPYEADAQLAYLCKEGYVQAVVSEDSDL 202
Query: 116 LVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKG 174
+ + +I KLD G C + + LP + P + F CILSGCDY ++
Sbjct: 203 IAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGCILSGCDYLPSLRH 259
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+KKA + + +R + V K G + + F + V+DP
Sbjct: 260 IGVKKA--FRLVAQATSVPSIMRSLEV--KFGFSKEELDAYEAKLQQAFYCFAHHFVFDP 315
Query: 235 VSKEVVPLNPL 245
V KEV L PL
Sbjct: 316 VRKEVKHLTPL 326
>gi|340055345|emb|CCC49658.1| putative exonuclease, fragment, partial [Trypanosoma vivax Y486]
Length = 457
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 134/250 (53%), Gaps = 17/250 (6%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH---- 59
+ +LL +K ++VFDG +P K TE RR+ R ++ KA +L+ RGS + S
Sbjct: 96 LELLLRCGVKPVLVFDGAPIPMKHETEIKRRQNRAAYFDKALQLM---RGSSSTSRSWRE 152
Query: 60 ----LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
L ++++++ ++A VI + R ++CIVAP+EADAQ+AYL GY VITEDSDL
Sbjct: 153 VVTLLEKAMNISTELAHIVILLLQDRRMECIVAPYEADAQLAYLCRKGYVQAVITEDSDL 212
Query: 116 LVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
+ + +I KLD GNC ++ + L A + F CILSGCDY + G+
Sbjct: 213 IAYHCPCLIAKLDSKGNCEVLNVQDLRRCET--FAGLSYQAFLVGCILSGCDYLPNLPGI 270
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
G+KKA D V + K+ + K G + +++ + F + V+DP
Sbjct: 271 GVKKAFDVVKK--ADSISAIIYKLKM--KHGFTEEEIRQYEVNLRRAYYCFAHHFVFDPN 326
Query: 236 SKEVVPLNPL 245
S++V+ L PL
Sbjct: 327 SRKVLHLTPL 336
>gi|399217832|emb|CCF74719.1| unnamed protein product [Babesia microti strain RI]
Length = 434
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 151/304 (49%), Gaps = 31/304 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ +++L+ H I IMVFDG+ LPAKE RR++R K +A + + + + +
Sbjct: 60 LSMLNLLILHGITPIMVFDGKELPAKEQENNKRRERRQQAKEEALRMYKSGKYDKGEFYR 119
Query: 61 R--QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
+ Q++ VT ++ VI C+ V I+APFEAD Q+AYL G A+ ++EDSDLLV+
Sbjct: 120 KCIQAITVTDEIIDRVIATCKHLNVQVIIAPFEADPQLAYLCRTGVANIAVSEDSDLLVY 179
Query: 119 GAKKIIYKLDLSG--------NCCFMDREKLPSALKMP--------LAKFTDAKFRYMCI 162
G +++YKL G C + R+ PS + P L FT F MCI
Sbjct: 180 GCPRVLYKLGKDGYAEEVNIVTICHLPRQISPSYPRGPKPSGNIAMLKDFTPEMFATMCI 239
Query: 163 LSGCDYWTG--IKGMGLKKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 218
LSG DY I GMG+ A V + +D E N K+ ++ I E LT+
Sbjct: 240 LSGSDYDNNAHIHGMGIVMAYKIVSKYKSIDAIMEFLETDSNWKDKLPQHLSI--EQLTA 297
Query: 219 FHNTNL-MFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQA---FQLAL 274
+ T L +F++ VYDP K + N ES D F+ ++ + DQ Q+A
Sbjct: 298 KYRTALCIFMHHWVYDPEQKLIC--NISESRQIDTQFTSSEMQNIG-DSDQGSDVIQVAT 354
Query: 275 GNLD 278
G ++
Sbjct: 355 GVIN 358
>gi|261330365|emb|CBH13349.1| exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 796
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 144/276 (52%), Gaps = 31/276 (11%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + +LL + +K ++VFDGR LP K EE+RR+ R H ++A +LL R S
Sbjct: 84 MSQVELLLRYGVKPVLVFDGRELPMKREEEEERRRNRIKHLSEALDLL--RRNSRPTPSE 141
Query: 61 RQSV--------DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITED 112
R+ + D+T ++A VI + R ++CIVAP+EADAQ+AYL Y D VITED
Sbjct: 142 RKDIAGLVERGMDITTELAHAVIMMLQERQLECIVAPYEADAQLAYLCQQRYVDAVITED 201
Query: 113 SDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYWTG 171
SDLLV+ ++I KLD G+C ++ E S L PL + + F CILSGCDY
Sbjct: 202 SDLLVYWCPRLIAKLDHKGSCQVIEVE---SVLHCPLFQGLSYNSFLVGCILSGCDYLPN 258
Query: 172 IKGMGLKKAKDYVFSIMD-----PDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMF 226
++ +G+KKA F IM PD L + G + +++ F
Sbjct: 259 LRHIGVKKA----FGIMSEARSVPDVIRLLEE-----NYGFPREQLRKYEAGLQRAIYCF 309
Query: 227 LYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKEL 262
L+ V+DPV + +V PL + + F Q L EL
Sbjct: 310 LHHIVFDPVRRALVTRTPLPNGV---AFKQSILGEL 342
>gi|256271259|gb|EEU06336.1| Din7p [Saccharomyces cerevisiae JAY291]
Length = 430
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 129/247 (52%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L A +
Sbjct: 60 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +F + L+GCDY +GI +G+
Sbjct: 180 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFLNLVCLAGCDYTSGIWKVGVV 238
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 239 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 292
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 293 ITTLNNI 299
>gi|30685678|ref|NP_849684.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|332191554|gb|AEE29675.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 577
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 152/295 (51%), Gaps = 12/295 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L ++I ++V DG ++P K AT ++R ++R ++ A L + A
Sbjct: 63 MHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRQRKANFDAAMVKLKEGNVAAATELF 122
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLL 116
+++V VT MA +IQ ++ V+ IVAP+EADAQ+AYL+ G VITEDSDLL
Sbjct: 123 QRAVSVTSSMAHQLIQVLKSENVEFIVAPYEADAQLAYLSSLELEQGGIAAVITEDSDLL 182
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+G K +I+K+D G + + + A+ K F F MC+L+GCD+ + G
Sbjct: 183 AYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLPSVPG 242
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ +A ++ + + K GK+ + ++ +SF +F + VYD
Sbjct: 243 VGISRAHAFISKYQSVELVLSFLKTK-KGKL-----VPDDYSSSFTEAVSVFQHARVYDF 296
Query: 235 VSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
+K++ L PL + + QL +L A +A GN+DP +++ + ++
Sbjct: 297 DAKKLKHLKPLSHNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 351
>gi|307106511|gb|EFN54756.1| hypothetical protein CHLNCDRAFT_24009 [Chlorella variabilis]
Length = 341
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 128/245 (52%), Gaps = 7/245 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I +LL + ++VFDG LP K E R + R+ +K++A +L + A
Sbjct: 60 MARIELLLGAGVTPLVVFDGGRLPNKADEERSRERNREENKSRARQLWQQGNKAAAMECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD++ A ++A + R + +VAP+EADAQMAYL + GY D V+TEDSDLL +G
Sbjct: 120 QKAVDISPSHAKQFVEALKRRSIKYVVAPYEADAQMAYLAVNGYVDVVLTEDSDLLCYGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +K+D +G + E LP + F F+ MC+L+GCD+ + + G+G+KKA
Sbjct: 180 PTVFFKMDKNGEGEEVQLEDLPQCKDLAFQGFGHDLFQEMCVLAGCDFVSSLPGIGIKKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ F +R + G KI + + F +Q VY P VV
Sbjct: 240 HQHLRRTR--CFLKVVRSLRFDG-----TKIPEGYEQRVQRALWTFKHQRVYCPRRHAVV 292
Query: 241 PLNPL 245
PL+ +
Sbjct: 293 PLHEI 297
>gi|354544656|emb|CCE41382.1| hypothetical protein CPAR2_303710 [Candida parapsilosis]
Length = 717
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 18/262 (6%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLR 61
I ML I VFDG L K+ T RR R H+AK +RG A
Sbjct: 63 IQMLQHFGITPYFVFDGASLTTKQDTNSKRRVLR--HEAKKLAEKYAERGHLQLAYKEYM 120
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ VT +MA +++ ++ +VAP+EAD QM YL G D +++EDSDLL+FG
Sbjct: 121 KAAYVTSQMAKSIMCELDVLKIEYVVAPYEADPQMVYLEKIGIVDGILSEDSDLLIFGCN 180
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+I KL +C ++RE ++P LA +T + R + +LSGCDY G+ G+GLK A
Sbjct: 181 KLITKLKDDSSCVEINREDFHKVRQIPYLASYTSEQLRLVAMLSGCDYTKGVPGVGLKSA 240
Query: 181 KDYVFSIMDPDFENALRKINVYGK-IGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
V + L K+ + + +G KI +F NL F +Q V+DP + +
Sbjct: 241 FQMVRRY------HTLHKVTIALRSMGK--KIPSDFEDEVIKANLAFQFQKVFDPRIQSL 292
Query: 240 VPLNPLESEMRDEVFSQLSLKE 261
LN E+ + +F Q L E
Sbjct: 293 ATLN----EIPESIFEQFDLLE 310
>gi|405118233|gb|AFR93007.1| exonuclease [Cryptococcus neoformans var. grubii H99]
Length = 997
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + L H I+ +VFDG LPAK+ TE R K R + KA L R EA+
Sbjct: 1 MYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKSRSDNLEKARSLEAQGRIKEAKEAY 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I+A RA VD +VAP+EADAQ+
Sbjct: 61 TRCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQL------------------------ 96
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
CF++RE + P+ +TD FR M +LSGCDY I G+G+K A
Sbjct: 97 -------------CFLEREG-----EFPMHGWTDMHFRRMAMLSGCDYLNSIPGIGIKTA 138
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ F + L+ I + G+Y+ + +L+ F L FLYQ VYDP +V
Sbjct: 139 HRLMRR-----FNSLLQHIRLE---GTYL-VPPTYLSDFAQAELAFLYQRVYDPSLGRLV 189
Query: 241 PLNPLESEMRDEVFSQLSLK--ELELPKDQAFQLALGNLDPFSLEEM-DQW 288
LNPL + K +++ ++ A ++A G++ P + E+ D+W
Sbjct: 190 HLNPLPPTGSGFQLGEEGEKWVGVDVEEELARRMARGDVHPETRAEIVDEW 240
>gi|297734295|emb|CBI15542.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 56 AQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITE 111
A +++V +T MA +IQ R ++ +VAP+EADAQ+AYL+ G VITE
Sbjct: 96 ASELFQRAVTITPSMAHQLIQILRTENIEFVVAPYEADAQLAYLSNLEADKGGIAAVITE 155
Query: 112 DSDLLVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW 169
DSDL+ +G + II+K+D GN +DR A F F MC+L+GCD+
Sbjct: 156 DSDLMAYGCRAIIFKMDRYGNGEEMVLDRVFDSVARAPSFQNFDKELFTGMCVLAGCDFL 215
Query: 170 TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
+ G+G+ +A V + N R ++V K ++ +++ SF +F +
Sbjct: 216 PSVPGIGIARAYSMV-----AKYRNLDRVLSVL-KFEKRNQMPEDYTKSFREAVAVFQHA 269
Query: 230 PVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
+YD +K V + PL ++ + +L E+P A +A GNLDP ++E D ++
Sbjct: 270 RIYDADTKRVQHMKPLTDDLLQSLDGELDFLGPEIPPSIATAIAEGNLDPVTMEAFDHFS 329
Query: 290 PDSEENLPVTSIWSKQYEKP-CDRHSSEES 318
+ P + S + KP S+EES
Sbjct: 330 SHESQPEPTVTQTSNEIVKPEATAQSTEES 359
>gi|224014124|ref|XP_002296725.1| exonuclease 1 [Thalassiosira pseudonana CCMP1335]
gi|220968580|gb|EED86926.1| exonuclease 1 [Thalassiosira pseudonana CCMP1335]
Length = 334
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 120/238 (50%), Gaps = 14/238 (5%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
+++++V DG LP+K+ RR +RDS KA A+ + QS VTHK+
Sbjct: 82 MEILLVIDGDALPSKKEENSQRRAERDSAFEKAMTAEASGDSRAARRYYAQSCSVTHKIR 141
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
+++AC+ G+ IVAP+EADAQMA L G D VITEDSD+LV+G + +K+D
Sbjct: 142 YELMKACKLVGIAFIVAPYEADAQMARLAHTGVVDLVITEDSDILVYGCPRACFKIDF-- 199
Query: 132 NCCFMDREKLPSAL----KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSI 187
+ C +L L + +T F +MCI+SGCDY G+ G+G+K A V
Sbjct: 200 DTCQGQEIQLMKNLGENESLSFKNWTHDMFVFMCIISGCDYCKGLPGIGIKLAHKIVRVH 259
Query: 188 MDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPL 245
P ++ + ++ +F F F +Q V+ P +++ L P+
Sbjct: 260 RTPS--------KIFSALRGAGRMPTDFEEKFWIAFRTFRHQRVFCPSRQQIETLFPI 309
>gi|320167587|gb|EFW44486.1| exodeoxyribonuclease 1 [Capsaspora owczarzaki ATCC 30864]
Length = 522
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 131/257 (50%), Gaps = 21/257 (8%)
Query: 36 KRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQ 95
+RD + A+AA L D A H ++ VD A RA V+ IVAP+EADAQ
Sbjct: 55 RRDFYTAQAAASLRNDDHFTAYRHYQKCVD-----------ALRAINVEYIVAPYEADAQ 103
Query: 96 MAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA 155
+ YL Y VI+EDSDLL+FG ++++YK+D G +D++ + L++ L +T
Sbjct: 104 LGYLARENYIAAVISEDSDLLLFGCQRVLYKMDKFGEGVLIDQKDFANCLELDLQNWTLD 163
Query: 156 KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEF 215
+ R MCILSGCDY I G+GLK A + I +N + + + + +++
Sbjct: 164 QLRRMCILSGCDYLDSISGIGLKTANKLL--IRYKTVQNVVTHMR-----KKMMDVPRDY 216
Query: 216 LTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALG 275
F F YQ V P S E+ + P+ + SQ+ L A +ALG
Sbjct: 217 EDLFLQAENTFKYQRVVHPGSLELTHVTPVPDAVD---ISQMDYIGPILEPHVARGIALG 273
Query: 276 NLDPFSLEEMDQWNPDS 292
N++P ++ MD ++P++
Sbjct: 274 NINPNTMACMDNYDPNA 290
>gi|302840229|ref|XP_002951670.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300262918|gb|EFJ47121.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 351
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 127/242 (52%), Gaps = 7/242 (2%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I MLL + + I+VFDG LP K E+ RR+ R +A + A +++
Sbjct: 63 IDMLLGNGVIPIVVFDGCRLPMKADEEDSRRRSRREALERARTHSASGNMAAATECYQRA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VD+ MA V++A R R V C+VAP+EADAQM+YL + G V+TEDSD+L +G ++
Sbjct: 123 VDIAPWMAKVVMEALRERQVTCLVAPYEADAQMSYLALRGDVHAVLTEDSDMLAYGCPRV 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YKLD G+ + LP ++ +A F MCIL+GCD+ I G+G+KKA
Sbjct: 183 LYKLDRGGSGEEVMLSDLPLVREINMAGFNHDMLLQMCILAGCDFLPNIPGVGIKKAHAM 242
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ DF +R ++ G + F T +F +Q V+ P+++ + L
Sbjct: 243 IRK--HRDFVKVVRNLHFNG-----TSPPPGYEIRFQRTLWLFRHQRVFCPIARALTHLR 295
Query: 244 PL 245
PL
Sbjct: 296 PL 297
>gi|5262584|emb|CAB45733.1| hypothetical protein [Homo sapiens]
Length = 672
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 22/207 (10%)
Query: 116 LVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
L FG KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+
Sbjct: 1 LAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGI 59
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GL KA + +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+
Sbjct: 60 GLAKACKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPI 117
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS--- 292
++++PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 118 KRKLIPLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMP 174
Query: 293 -------------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 175 AHSRSHSWDDKTCQKSANVSSIWHRNY 201
>gi|429963370|gb|ELA42914.1| hypothetical protein VICG_00229 [Vittaforma corneae ATCC 50505]
Length = 358
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 131/234 (55%), Gaps = 16/234 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL + I I VFDG L +K+ T ++R++ R+ ++A+ L + A+ +++ V V
Sbjct: 66 LLDYGITPIFVFDGDFLESKKKTIQERKQLREKYRAEVDFFLQRNDVPRARELMKRCVSV 125
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T ++ ++++ +A ++ IV+P+EADAQ+ +L Y DY++TEDSDL+V+GA +I+YK
Sbjct: 126 TPEILHSILRVLKANNIEFIVSPYEADAQLYFLQRIKYIDYILTEDSDLVVYGATRILYK 185
Query: 127 LDLSGNCCFMDREKLPSA-LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
D + E+ SA L + K+ +CILSGCDY I+G+G+ A + +
Sbjct: 186 YD------GVHVEEYDSARLHLCKDKYFQENILDICILSGCDYLDSIRGIGIVTAYEKLK 239
Query: 186 SIMDPD-FENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
+ D D F N++ I + KE+++ F FL+ VY+P + +
Sbjct: 240 ELGDVDSFVNSM--------ISLKKNVPKEYISDFVKAKATFLHHIVYNPYTMQ 285
>gi|325189982|emb|CCA24465.1| exonuclease 1 putative [Albugo laibachii Nc14]
Length = 542
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSE-AQSH 59
++ I +L H I I VFDG +PAK T+ R +KR+ K +A + E A+
Sbjct: 9 IQQILLLQKHHITPIFVFDGAPVPAKADTQAMRNRKRNMWKVRALTSRKSNEADEKAKRS 68
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
Q++ VT++M L +I R V +VAP+EADAQ+A+L+ D VI+EDSD + +G
Sbjct: 69 FTQAISVTNEMKLRLINVLREMNVQYLVAPYEADAQLAFLSRMKIVDAVISEDSDCIAYG 128
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+ I++K G +++ L + + K+T+ F C L GCDY + G+G
Sbjct: 129 CRTILFKWSGDGWASELNKRSLGANEDLCFVKWTEEMFVVFCALCGCDYCPSLPGIGPIT 188
Query: 180 AKDYVFS-IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A YV + I PD L++ + +E+ ++ + + + V+DP ++
Sbjct: 189 AYKYVNTFITAPDILEELKR-------SDKNHLPQEYDQKLYSAVITYRHHLVFDPRKEK 241
Query: 239 VVPLNPLE 246
+ LN L+
Sbjct: 242 LRLLNALD 249
>gi|303391387|ref|XP_003073923.1| exonuclease 1 [Encephalitozoon intestinalis ATCC 50506]
gi|303303072|gb|ADM12563.1| exonuclease 1 [Encephalitozoon intestinalis ATCC 50506]
Length = 363
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 21/250 (8%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ +L + I I+V DG L +KE T R+ +++ + +A L+ + +A++ +RQ
Sbjct: 63 VKLLENYGITPIIVLDGDLLSSKEETNRKRQIRKEKSRKEAEYWLMKNDPEKAKAFMRQC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ VT + ++ + V+ I++P+E+DAQ+ YL GY DY++TEDSDL+ +G+ +I
Sbjct: 123 ISVTRGVVSDITKMLERIDVEYIISPYESDAQLCYLERIGYIDYILTEDSDLIPYGSNRI 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YK D + RE S L K + + ILSGCDY + I+G+G+ A
Sbjct: 183 LYKFDNT-----FVREFSRSCLAEVRGKDFEENILDISILSGCDYLSSIQGVGIVTA--- 234
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVK----ITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
L + ++ Y+K + K +L F FLYQ VYDP+ ++
Sbjct: 235 ---------HKLLSRERTIERVVEYLKHRKPVPKNYLDDFFKARKTFLYQIVYDPIERKR 285
Query: 240 VPLNPLESEM 249
L + EM
Sbjct: 286 RYLQDVTEEM 295
>gi|156084852|ref|XP_001609909.1| XPG I-region family protein [Babesia bovis]
gi|154797161|gb|EDO06341.1| XPG I-region family protein [Babesia bovis]
Length = 501
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 152/305 (49%), Gaps = 14/305 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG---SEAQSHL 60
+ +LL+HKI IMVFDG +P KE + RR++RD + +A ++ + G +E
Sbjct: 75 LSVLLSHKITPIMVFDGYDMPTKETENQLRRERRDKAREEALAMIEKNGGAINTEIMRKC 134
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q++ +T ++ V++ CRA V +VAP+EADAQ++YL +G A ++EDSDLLV+G
Sbjct: 135 MQAIHITPEVIARVMEICRAMNVRIVVAPYEADAQVSYLCRSGIAYAALSEDSDLLVYGC 194
Query: 121 KKIIYKLDLSGNC----CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG--IKG 174
++ +KL+ G +++ L + F MC+LSG DY G I G
Sbjct: 195 PRVWFKLERDGKADELTLGFNKDPDVKCNTGLLKGLSHRMFIAMCVLSGSDYDNGCHIHG 254
Query: 175 MGLKKAKDYVFSIMD-PDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
MG+K A ++ P L+ + + K KE + +FL+ VYD
Sbjct: 255 MGIKLAHRFILQYETLPAVMAFLQSSDAWSKKFPAHLTIKELEAYYMRVMQIFLHNIVYD 314
Query: 234 PVSKEVVPLNPLESEMRD-EVFSQLSLKELELPKDQAFQL-ALGNLDPFSLEEMDQWNPD 291
+ ++P+ + E+ +L+ +L +D F++ + G ++P + E M D
Sbjct: 315 VRHDTLRHISPVSDGATNMEIIRELT--QLIRERDGNFRMVSEGLINPRNGESMSYTMTD 372
Query: 292 SEENL 296
+ L
Sbjct: 373 KDREL 377
>gi|390599651|gb|EIN09047.1| hypothetical protein PUNSTDRAFT_134221 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 637
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 119/228 (52%), Gaps = 16/228 (7%)
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD- 128
MA +I+A +A V +VAP+EADAQ+AYL G ++TEDSDLLVFG + ++ KLD
Sbjct: 1 MAYQLIKALKAENVPYVVAPYEADAQLAYLERTGAVSAILTEDSDLLVFGCRHVLSKLDH 60
Query: 129 LSGNCCFMDREKLP--SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
+S + R S+ + L ++D + R M ILSGCDY I G+GLK A +
Sbjct: 61 VSATVSAVSRPDFGSLSSSDITLLGWSDVQLRAMAILSGCDYLPSIPGVGLKTA--WSLL 118
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN--- 243
+ ENA+R + + GK + +L +F +FL+Q VYDP +V LN
Sbjct: 119 RKHKNVENAVRALRLEGK----KPVPDGYLDAFRLAEKVFLHQRVYDPAQARLVHLNDVS 174
Query: 244 -PLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNP 290
P R ++ + ++ + A ++A G++ SL M NP
Sbjct: 175 RPASPGTR---AARPTSARNDVATETAARIATGDVCLASLLPMTNINP 219
>gi|393244253|gb|EJD51765.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 320
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 122/255 (47%), Gaps = 31/255 (12%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+ + ML + I+ VFDG+ LPAK R R+ +AA L + +
Sbjct: 61 RLLLMLRHYDIEPYFVFDGQALPAKANVTRRRMAVREEAILRAATLEKKGDKRASAVAYK 120
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
SV VT +M I+ RA G+ +VAP+EADAQ+A+L+ G D V +EDSDL+VFG +
Sbjct: 121 ASVVVTTQMVTQTIKILRAAGIPYLVAPYEADAQLAFLDRVGLIDAVYSEDSDLVVFGVQ 180
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
K++ KL G C + L + + R M +L+GCDY G+ G+GL A
Sbjct: 181 KLVCKLQDDGACAIVRHADL---------SVSHSHLRLMALLAGCDYTRGLPGVGLATAH 231
Query: 182 DYVFSIMDPDFENALRKINVYGKIGSYVKI----TKE---FLTSFHNTNLMFLYQPVYDP 234
+ N + I +Y+K T E F N FL+Q V+DP
Sbjct: 232 ---------------KVANQFPVISTYIKRRFTNTPELELFQREMRLANAAFLFQTVFDP 276
Query: 235 VSKEVVPLNPLESEM 249
++ ++ LN L ++
Sbjct: 277 KTRALISLNDLTDDV 291
>gi|440491647|gb|ELQ74269.1| 5'-3' exonuclease [Trachipleistophora hominis]
Length = 441
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 20/237 (8%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQSVDVTHKMAL 72
++VFDG LP+K E RR KR+ +A+ L + +G+ EA ++ S+ ++ M
Sbjct: 74 VVVFDGESLPSKHVVNERRRMKRE--EARTMAELQMSKGNVREAMRYIACSISISPHMVA 131
Query: 73 NVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN 132
+ Q R GV+ IV+P+E+DAQ+AYL Y +ITEDSDL+V+ ++YK +G
Sbjct: 132 QIAQFLRDNGVEVIVSPYESDAQLAYLQRINYVHSIITEDSDLIVYKCNNVLYKYG-NGY 190
Query: 133 CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 192
+R +A + D ILSGCDY ++G+G+ A + +
Sbjct: 191 VMHYERGAFRTANEFVCDNLLDVS-----ILSGCDYLENVRGVGISSAVKMMRRYGSVEL 245
Query: 193 E-NALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESE 248
N +R+ + +++L+ F L F YQ VYDPV E V L+ +E
Sbjct: 246 VINEMRRTR---------SVPEDYLSCFVRARLTFKYQVVYDPVRNERVYLDGSRNE 293
>gi|412993637|emb|CCO14148.1| exonuclease [Bathycoccus prasinos]
Length = 640
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
Query: 13 KVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMAL 72
+V VFDG LP+K E+ RR++R++ K A + A +++DVT +MA
Sbjct: 76 EVTYVFDGASLPSKAREEKQRRQRREAAKDMARKAWSEGNRKLAFDCYGKALDVTFEMAK 135
Query: 73 NVIQACRARGVD-CIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
V+ A G+ +VAPFEADAQ+AYL GYAD VITEDSD+L GA + YK+D +G
Sbjct: 136 RVMDAIEREGLGRVLVAPFEADAQLAYLCKNGYADVVITEDSDMLAHGAPIVFYKMDNNG 195
Query: 132 NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ E LP + +FT F MC +SGCDY + +G+KKA + +
Sbjct: 196 IGDEIRYEDLPRNRGLRFDQFTPDLFLQMCCMSGCDYLPSLPNVGMKKAHQAMRKCR--E 253
Query: 192 FENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
+ ALR G +++ KE+ + F + + F + VY P K+ V L+
Sbjct: 254 YGAALRSFKFEG-----IRVDKEYESGFRDALITFKHALVYCPTRKKCVNLS 300
>gi|403348528|gb|EJY73701.1| XPG family protein [Oxytricha trifallax]
Length = 734
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 131/252 (51%), Gaps = 9/252 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ++ + IK I VFDG+HL AKEATE+ R + +K A + +A+ +
Sbjct: 60 LKMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAEDGNEEDARKYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+ + KM I + ++ +VAP+EAD+Q+AY+ G AD+ I+EDSDL+ +G
Sbjct: 120 MRSLILRSKMIDLFIDILKKLEIEMVVAPYEADSQIAYMVKEGIADFAISEDSDLIAYGC 179
Query: 121 KKIIYKLDLSGNCC------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
K++ KL+ +G C F ++ L K + +F +CI++GC+Y I+
Sbjct: 180 PKLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQFVQICIMAGCEYLPSIQQ 239
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+GLK A +F + D E L + KI ++ + +L++ +F YQ V+D
Sbjct: 240 VGLKVAIK-LFMKNNGDVEQVLESLKT-NKIFK-DRVPEGYLSALKKVQQLFFYQTVFDT 296
Query: 235 VSKEVVPLNPLE 246
++ L E
Sbjct: 297 RIGKLTSLEKFE 308
>gi|403337691|gb|EJY68068.1| XPG family protein [Oxytricha trifallax]
Length = 719
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 131/252 (51%), Gaps = 9/252 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ++ + IK I VFDG+HL AKEATE+ R + +K A + +A+ +
Sbjct: 60 LKMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAEDGNEEDARKYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+ + KM I + ++ +VAP+EAD+Q+AY+ G AD+ I+EDSDL+ +G
Sbjct: 120 MRSLILRSKMIDLFIDILKKLEIEMVVAPYEADSQIAYMVKEGIADFAISEDSDLIAYGC 179
Query: 121 KKIIYKLDLSGNCC------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
K++ KL+ +G C F ++ L K + +F +CI++GC+Y I+
Sbjct: 180 PKLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQFVQICIMAGCEYLPSIQQ 239
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+GLK A +F + D E L + KI ++ + +L++ +F YQ V+D
Sbjct: 240 VGLKVAIK-LFMKNNGDVEQVLESLKT-NKIFK-DRVPEGYLSALKKVQQLFFYQTVFDT 296
Query: 235 VSKEVVPLNPLE 246
++ L E
Sbjct: 297 RIGKLTSLEKFE 308
>gi|301113736|ref|XP_002998638.1| exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262111939|gb|EEY69991.1| exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 2745
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 146/294 (49%), Gaps = 30/294 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--- 57
+++I +L H I I+VFDG LP+K +R + R + KA +LL E Q
Sbjct: 2083 IQHIKLLQTHNITPILVFDGAPLPSKAQENANRGRSRRDWQLKAEKLL--QEKKEDQDPR 2140
Query: 58 ---SHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
S ++V VT+ M + ++ R + VAP+EADAQ+A+L+ D VI++DSD
Sbjct: 2141 AVFSACARAVSVTNDMVMRLVAVLRRMNITFYVAPYEADAQLAFLSRQKIVDVVISQDSD 2200
Query: 115 LLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+ +G K +++KL G + R L + ++ LA +T+ +C+L+GCDY + G
Sbjct: 2201 CVPYGVKTVLFKLSPDGWGSELKRRSLGANEELSLAGWTE---EMLCVLAGCDYCASVSG 2257
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+G+ A V + P + GS V ++++ F++ L + +Q V+DP
Sbjct: 2258 VGIITAYKLVNTYKTPAEQQK----------GSAV--SEDYPEQFYSAILTYRHQLVFDP 2305
Query: 235 VSKEVVPLNPLESEMRDEVFSQLS-----LKELELPKDQAFQLALGNLDPFSLE 283
++ L+PL ++ ++ + L +EL D +A G + P + E
Sbjct: 2306 RDAKLKMLSPL--DISKDILPHVDKGLHFLGNVELRDDVVASIAAGEIHPTTHE 2357
>gi|403371708|gb|EJY85737.1| XPG family protein [Oxytricha trifallax]
Length = 734
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 131/252 (51%), Gaps = 9/252 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ++ + IK I VFDG+HL AKEATE+ R + +K A + +A+ +
Sbjct: 60 LKMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAEDGNEEDARKYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+ + KM I + ++ +VAP+EAD+Q+AY+ G AD+ I+EDSDL+ +G
Sbjct: 120 MRSLILRSKMIDLFIDILKKLEIEMVVAPYEADSQIAYMVKEGIADFAISEDSDLIAYGC 179
Query: 121 KKIIYKLDLSGNCC------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
K++ KL+ +G C F ++ L K + +F +CI++GC+Y I+
Sbjct: 180 PKLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQFVQICIMAGCEYLPSIQQ 239
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+GLK A +F + D E L + KI ++ + +L++ +F YQ V+D
Sbjct: 240 VGLKVAIK-LFMKNNGDVEQVLESLKT-NKIFK-DRVPEGYLSALKKVQQLFFYQTVFDT 296
Query: 235 VSKEVVPLNPLE 246
++ L E
Sbjct: 297 RIGKLTSLEKFE 308
>gi|403340704|gb|EJY69645.1| XPG family protein [Oxytricha trifallax]
Length = 666
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 14/259 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + ++ + IK I VFDG L AK TE+ R+ + ++K A + EA+ H
Sbjct: 29 IKMLKLVQYYGIKPICVFDGMPLDAKMETEQGRKDSKKTNKDLALRFAREGKVEEAKKHF 88
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+ + KM ++ + ++ I AP+EADAQ+AYL G AD I+EDSDL+ FG
Sbjct: 89 MRSLQLRSKMIDLLMDVLKVLDIEFIKAPYEADAQIAYLVREGIADIAISEDSDLIAFGC 148
Query: 121 KKIIYKLDLSGNCC------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+++ KLD G C F+ K+ A L K +F +CI+ GCDY I+
Sbjct: 149 PRLLMKLDFRGICQVFDADDFIQNNKITDASLKFLQKANRKQFVSICIMGGCDYLPSIQK 208
Query: 175 MGLKKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
+GLK A + ++ E A+R + Y + + ++ + +F YQ V+
Sbjct: 209 VGLKIAVKFFQKHETIEKVIE-AMRANSTYTQ-----NVPFNYVEALLKVQTLFFYQTVF 262
Query: 233 DPVSKEVVPLNPLESEMRD 251
+P + + L + E +D
Sbjct: 263 NPRTNKFTSLENIPEEDQD 281
>gi|348670262|gb|EGZ10084.1| hypothetical protein PHYSODRAFT_523066 [Phytophthora sojae]
Length = 2851
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLIL---DR-GSEA 56
++ I +L H I I+VFDG LPAK R + R K KA +LL DR G
Sbjct: 2135 IQQIKLLQEHDITPILVFDGAPLPAKARENAARSRSRAEWKLKAEKLLKEKEDDRDGRAV 2194
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
S ++V VT++M + +I R + VAP+EADAQ+A+L+ D VI++DSD +
Sbjct: 2195 FSACTRAVSVTNEMVMKLIAVLRRMNITFYVAPYEADAQLAFLSRQKIVDVVISDDSDCV 2254
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+G K +++KL G + R L + ++ +T+ +CIL+GCDY + G+G
Sbjct: 2255 PYGVKTVLFKLSPDGWGSELKRRSLGANEELSFVGWTE---EMLCILAGCDYCPSVSGVG 2311
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
+ A V P V + GS + F +++ L + +Q V+DP +
Sbjct: 2312 IINAYKLVSQFKTP----------VEKQKGSV--LPDNFEEHYYSAILTYRHQLVFDPRN 2359
Query: 237 KEVVPLNPLESEMRDEVFSQLS-----LKELELPKDQAFQLALGNLDPFSLE 283
++ L+PL ++ + ++ L +EL D +ALG + P + E
Sbjct: 2360 AKLKMLSPL--DVSKGILPRVDKGLHFLGNVELRDDVVESIALGQIHPVTHE 2409
>gi|294918871|ref|XP_002778492.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239886936|gb|EER10287.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 674
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 144/306 (47%), Gaps = 48/306 (15%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG------- 53
++ I +L + + ++VFDG +P K A EE +R + A +A+ +I G
Sbjct: 61 LRMIALLQGYDVTPVVVFDGCRMPGK-AEEEKKRGESRETAADSAKAMIESLGITQASQM 119
Query: 54 -SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITED 112
SE +S Q+V +T +M V+ A +A GV+ IVA +EADAQ+ Y+ AG D VI+ED
Sbjct: 120 TSEVRSKCMQAVRITKEMIQKVMCALKALGVEFIVAAYEADAQLGYMYSAGLVDAVISED 179
Query: 113 SDLLVFGAKKIIYKLDLSGNCCFMD----------------------------REKLPSA 144
SD+L +G K +I KLD +G+C +D R+K +
Sbjct: 180 SDVLPYGCKVMIAKLDQAGDCQVVDISWALKGGSKLKEKSNEQEDQRLSFRELRDKYGAD 239
Query: 145 LKMPLAKFTDAKFRYMCILSGCDY--WTGIKGMGLKKAKDYVFSIMDPDFENALRKINVY 202
L L +T F C+L+GCDY + GMG+K A V +++ LR + +
Sbjct: 240 L-ANLRDWTKEVFIDACVLAGCDYSHACNLSGMGIKTAMKLVNKYR--NWQRTLRALKIE 296
Query: 203 GKIGSYVKITK--EFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEV----FSQ 256
K + K F +F +F + V+DP +K + + S + E FS
Sbjct: 297 DKFRKQLAYEKFETFRKNFELARAVFFFHRVFDPRTKRCITMTEDTSSLLTEAGRLEFSG 356
Query: 257 LSLKEL 262
S+ ++
Sbjct: 357 ASITDV 362
>gi|401828054|ref|XP_003888319.1| putative exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392999591|gb|AFM99338.1| putative exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 366
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 130/250 (52%), Gaps = 21/250 (8%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ +L + I ++V DG LP+KE T R+ K++ ++ +A L+ + +A+ +RQ
Sbjct: 63 VRVLENYGITPVVVLDGDTLPSKEETNRKRQVKKERNRKEAEHWLMKNDPEKAKGFMRQC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ VT ++ ++++ V+ I++P+E+DAQ+ YL GY D ++TEDSDL+ +G+ +I
Sbjct: 123 ITVTREIVSDIVKMLERINVEYIISPYESDAQLCYLQRIGYIDCILTEDSDLIPYGSNRI 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YK D C F+ +E L K + + ILSGCDY I+G+G+ A
Sbjct: 183 LYKFD----CTFV-QEFTRDCLTEARGKDFEENILDISILSGCDYLASIQGIGVVTAHKL 237
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVK----ITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
+ R+ V G I Y++ + +L F FL+Q VYDP+ ++
Sbjct: 238 L-----------SREKTVEGVI-EYLRHRKPVPSGYLDDFLKAKKTFLHQVVYDPIQQKR 285
Query: 240 VPLNPLESEM 249
L L ++
Sbjct: 286 RYLRDLREKL 295
>gi|123494006|ref|XP_001326419.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121909333|gb|EAY14196.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 414
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 126/243 (51%), Gaps = 11/243 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ ++ IK I++FDG++LP+K+ T E R+++R+ KA + +EA +
Sbjct: 60 MSKVNGIINCGIKPIIIFDGQNLPSKQITTEKRKQEREQALEKARYFEQIGNNAEAFKNY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V +T + IQ + V+ VAP+EADAQ+ YL +GY D V++EDSDL+ +
Sbjct: 120 QKAVAITPETVHTWIQELQRNAVEYFVAPYEADAQLVYLAKSGYVDAVLSEDSDLIAYQC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ K D + + +D + + + +P FT +CIL+GCDY I +G K A
Sbjct: 180 PTTLLKFDDTYHVLQIDFQNVLKLIGLPADTFTS-----LCILAGCDYIDHIDKLGPKTA 234
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ DP K+ K+ S + ++ + F F Y P+++E+V
Sbjct: 235 LKFLKDKNDP------HKVIDMVKLNSKFTVPDDYHSKFDQALTTFKCARAYSPLTQELV 288
Query: 241 PLN 243
L+
Sbjct: 289 FLS 291
>gi|154420990|ref|XP_001583509.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
gi|121917751|gb|EAY22523.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
Length = 317
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 32/285 (11%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I ML ++ ++ VFDGR LP K T ++R++ R+ K I S+ Q
Sbjct: 61 KNIEMLKSNGLQPYFVFDGRPLPGKAETNKERKEIREEAKKS-----IESGESDDQMTYA 115
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++V +TH +I + G+ IVAPFEADAQ+AYL YAD V+TED+DL+ + +
Sbjct: 116 KTVTITHATVKVLIDYLKEIGIPYIVAPFEADAQLAYLCRNNYADIVLTEDTDLICYKSP 175
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
++KLD GN ++ ++L L + +FT CIL Y I+ MG K A
Sbjct: 176 VTLFKLDSKGNVDYVIYQELIDFLGLSSDQFTQ-----FCILITDVYGKHIRMMGFKTAL 230
Query: 182 DYVFSIMDP----DFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
D + + D DF + K V + + +F + L+F +Q VYDP ++
Sbjct: 231 DLMKKLGDAHQVIDFARSKPKFTV----------PEGYEQTFDQSYLIFNHQIVYDPNTE 280
Query: 238 EVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSL 282
V L P + + + S + E+ K +L G +DPF+L
Sbjct: 281 STVHLTPTTN--NNPIMG--STMDREMLK----KLVTGEIDPFTL 317
>gi|326431006|gb|EGD76576.1| hypothetical protein PTSG_07693 [Salpingoeca sp. ATCC 50818]
Length = 838
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 23/258 (8%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ + +L ++ ++VFDG LP K + R ++++ A+ A LL + +EA +
Sbjct: 61 VQRLQLLRTFNVRPVVVFDGAPLPMKAEEKASRTERKEEIYARTAFLLSEGKEAEAAQEI 120
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ +DV+ +M ++Q C+ ++ +VAP+EADAQ+A++ G D VITEDSDL+ FGA
Sbjct: 121 QRGLDVSFEMRHKMVQVCQRLNIEYVVAPYEADAQLAFMARQGLVDAVITEDSDLIAFGA 180
Query: 121 KKIIYKLDLSGNCCFMDREKL------PSALKMPLAKFTDAKFRYMCILSGCDY------ 168
++ K+D +G + +L + T + + C+LSG DY
Sbjct: 181 ADVLLKMDSNGRGLRLRFHRLNEISIRDGKRTLSFKNMTLEQLQLCCVLSGSDYLPKHSK 240
Query: 169 WTGIKGMGLKKAKDYVFS-IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFL 227
W IKG+ LK A YV N LR S + F + F
Sbjct: 241 WH-IKGISLKTACKYVLRHGSTTQLLNTLR---------SKHDVASGFEEVLADAMFAFR 290
Query: 228 YQPVYDPVSKEVVPLNPL 245
+Q V+DP L PL
Sbjct: 291 HQIVWDPTRDRRCHLTPL 308
>gi|429964483|gb|ELA46481.1| hypothetical protein VCUG_02025 [Vavraia culicis 'floridensis']
Length = 414
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 16/261 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K I + H + ++VFDG LP+K E RR KR+ + A + +A ++
Sbjct: 60 LKRIQGVRKHGVIPVVVFDGDSLPSKCVINERRRTKREEARRMAEIEMSKGNVRDAMRYM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
S+ ++ +M + Q + V+ I++P+E+DAQ++YL Y ++TEDSDL+V+
Sbjct: 120 AGSISISREMVAEIAQFLKQNDVEVIISPYESDAQLSYLQRINYIHSIMTEDSDLIVYNC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
I+YK N M E+ ++ F +CILSGCDY +KG+G+ A
Sbjct: 180 NNILYKY---ANNHVMHYER---SVFREKNDFLCDNLLDVCILSGCDYLENVKGVGINSA 233
Query: 181 KDYVFSIMDPDF-ENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
+ + + N +R+ + + +L++F L F YQ VYDPV E
Sbjct: 234 IKLMKKLRSVELVVNEMRRTK---------SVPESYLSNFIKARLTFKYQVVYDPVKNER 284
Query: 240 VPLNPLESEMRDEVFSQLSLK 260
V L+ + E +S K
Sbjct: 285 VYLDGSSNSRNYEFLGCISAK 305
>gi|19074876|ref|NP_586382.1| EXONUCLEASE 1 [Encephalitozoon cuniculi GB-M1]
gi|19069601|emb|CAD25986.1| EXONUCLEASE 1 [Encephalitozoon cuniculi GB-M1]
Length = 366
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 21/238 (8%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ +L ++ I ++V DG L +KE T RR +++ + +A L+ + ++A+ +RQ
Sbjct: 63 VKLLESYGIIPVIVLDGDLLSSKEETNRKRRIRKEKSRKEAEYWLMRNDPAKAKGFMRQC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ VT ++ ++ + V+ I++P+E+DAQ+ +L GY D ++TEDSDL+ +G+ K+
Sbjct: 123 IAVTREVVSDIARMLERINVEYIISPYESDAQLCFLQRIGYIDCILTEDSDLIPYGSSKV 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YK D S +RE L S +K K + + ILSGCDY I+G+G+ A
Sbjct: 183 LYKFD-SAFVQEFNRECL-SEVK---GKDFEENILDISILSGCDYLASIQGVGVVTA--- 234
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITK----EFLTSFHNTNLMFLYQPVYDPVSK 237
L + ++ Y+K K +L F FL+Q VYDP+ K
Sbjct: 235 ---------HRLLSREKTVERVVEYLKYRKPVPSSYLEDFSRAKKTFLHQIVYDPIQK 283
>gi|449328623|gb|AGE94900.1| exonuclease 1 [Encephalitozoon cuniculi]
Length = 366
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 21/238 (8%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ +L ++ I ++V DG L +KE T RR +++ + +A L+ + ++A+ +RQ
Sbjct: 63 VKLLESYGIIPVIVLDGDLLSSKEETNRKRRIRKEKSRKEAEYWLMRNDPAKAKGFMRQC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ VT ++ ++ + V+ I++P+E+DAQ+ +L GY D ++TEDSDL+ +G+ K+
Sbjct: 123 IAVTREVVSDIARMLERINVEYIISPYESDAQLCFLQRIGYIDCILTEDSDLIPYGSSKV 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YK D S +RE L S +K K + + ILSGCDY I+G+G+ A
Sbjct: 183 LYKFD-SAFVREFNRECL-SEVK---GKDFEENILDISILSGCDYLASIQGVGVVTA--- 234
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVKITK----EFLTSFHNTNLMFLYQPVYDPVSK 237
L + ++ Y+K K +L F FL+Q VYDP+ K
Sbjct: 235 ---------HRLLSREKTVERVVEYLKYRKPVPSSYLEDFSRAKKTFLHQIVYDPIQK 283
>gi|167540341|ref|XP_001733568.1| exonuclease [Entamoeba dispar SAW760]
gi|165893425|gb|EDR21682.1| exonuclease, putative [Entamoeba dispar SAW760]
Length = 258
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++Y+ HKI I VFDG LP+K+ EE+R K+R S + A + EA
Sbjct: 60 LEYLKFFNIHKIIPIFVFDGATLPSKKLIEEERLKRRKSAYSNALKYEKEGNQIEALICW 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q++D+T A VI A RGV CIVAP+ ADAQMAYL+ GY D VI EDSD++ +G
Sbjct: 120 KQAIDITPFHASKVINAFHKRGVQCIVAPYGADAQMAYLSRTGYVDVVICEDSDMIPYGC 179
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLA-KFTDAKFRYMCIL 163
+++KL++ N C + LP K P T + + CIL
Sbjct: 180 SVVLFKLNIVSNICDVYQAQDLP---KTPFGINVTLFQLQITCIL 221
>gi|396082436|gb|AFN84045.1| exonuclease 1 [Encephalitozoon romaleae SJ-2008]
Length = 366
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 21/239 (8%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
+ +L ++ I I+V DG L +KE T R K+D ++ +A L+ + +A+ +RQ
Sbjct: 63 VKVLESYGITPIIVLDGDTLSSKEETNRKRYIKKDKNRKEAEHWLVKNDPEKAKGFMRQC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ VT ++ ++ + V+ I++P+E+DAQ+ YL GY D ++TEDSDL+ +G+ +I
Sbjct: 123 IAVTKEIVSDIARMLERINVEYIISPYESDAQLCYLERIGYIDCILTEDSDLIPYGSNRI 182
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YK D + +E L + + + ILSGCDY I+G+G+ A
Sbjct: 183 LYKFDNT-----FVQEFTRGCLSEARGRDFEENILDISILSGCDYLASIQGVGVVTA--- 234
Query: 184 VFSIMDPDFENALRKINVYGKIGSYVK----ITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
L K K+ Y++ I +L F FL+Q VYDP+ ++
Sbjct: 235 ---------HKLLSKEKTVEKVVEYLQHRKAIPDNYLDDFFKAKKTFLHQIVYDPIQQK 284
>gi|300121855|emb|CBK22429.2| DNA repair protein (XPGC) [Blastocystis hominis]
Length = 389
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 10/244 (4%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I +L I+ I VFDG PAK T+E R R + + EL +A Q+
Sbjct: 2 IKLLRRFSIQPIFVFDGAKFPAKRHTDEQRALIRQTKLKEGKELASQGDIKKATGIFTQT 61
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ ++ M V+ C + I++P+E+DA++A+L+ G D V+++DSD L F +
Sbjct: 62 ISISKAMMEEVLHLCIRLQIPYIISPYESDAELAFLSRTGIVDAVMSDDSDSLCFRCPCV 121
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+YKL +G C + EKL + + +T F ++CILSGCDY + + LK AK Y
Sbjct: 122 LYKLTDTGICKEVCLEKLLHSDEFTSFPWTCDLFEFLCILSGCDYLDNLPYIRLKTAKKY 181
Query: 184 VFSIMDPDFENALRKINVYGKIGSYV--KITKEFLTSFHNTNLMFLYQPVYDPVSKEVVP 241
+ + + NV+ + + + + ++ + T L F +Q V+DP++K
Sbjct: 182 I--------QLCGSEENVFPYVAKLPVHQYSSNYQSNLNRTRLSFRHQIVFDPIAKCRRF 233
Query: 242 LNPL 245
L P
Sbjct: 234 LTPF 237
>gi|300175835|emb|CBK21831.2| unnamed protein product [Blastocystis hominis]
Length = 276
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+++++LL + I I+VFDG LP KEAT +R++KR +A E A +
Sbjct: 69 MRFVNLLLQNDIVPIIVFDGADLPIKEATNNERKEKRSLALKRAKEYEANCDVKNALIYY 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+VD+T + + +I+ A + IVAP+EADA++AYL+ D+VIT DSDL+ FG
Sbjct: 129 SSAVDITPDLYIPLIKELIAHNISYIVAPYEADAELAYLSRMNLVDFVITIDSDLIAFGC 188
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
KI++ L+ G R+ L + + +FT+ IL GCDY K G K+
Sbjct: 189 SKILFDLNNQGAGFEFSRKDLFLSESLSFTQFTEEMALCFFILLGCDYLKNPKQWGWKR 247
>gi|221509067|gb|EEE34636.1| exonuclease, putative [Toxoplasma gondii VEG]
Length = 952
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 36/269 (13%)
Query: 4 IHMLLA---HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
IHM++ H+++ ++VFDG +PAK A +E R++ R +A ELL + EA+
Sbjct: 82 IHMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARQKASEEARELL--KKYEEARRAG 139
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ T VI ACR+ GV +VAP+EADAQ+A+L G ++EDSDLL G
Sbjct: 140 RKPPGDTR--VDTVISACRSLGVAFVVAPYEADAQLAFLARTGKIAAAVSEDSDLLAHGC 197
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP---------------------LAKFTDAKFRY 159
+++++K+D GNC +R LP + L F F
Sbjct: 198 QQVLFKMDREGNC---ERLSLPLNDRASPDAAQASVSASSAKKLGQLECLRDFDQTMFTA 254
Query: 160 MCILSGCDYW--TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 217
MC+L GCDY I G+G+ A +V + E ++ + K + + +E +
Sbjct: 255 MCVLGGCDYTHDVHINGLGISTACRFVHKL--GKLEAVIQYLFKDEKWRKKLTLPQEVVL 312
Query: 218 SFHNTNLM-FLYQPVYDPVSKEVVPLNPL 245
H ++ F + V+D S VV + L
Sbjct: 313 RGHKMAMVAFTHHRVFDVNSGLVVSASSL 341
>gi|237837741|ref|XP_002368168.1| exonuclease, putative [Toxoplasma gondii ME49]
gi|211965832|gb|EEB01028.1| exonuclease, putative [Toxoplasma gondii ME49]
Length = 951
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 36/269 (13%)
Query: 4 IHMLLA---HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
IHM++ H+++ ++VFDG +PAK A +E R++ R +A ELL + EA+
Sbjct: 82 IHMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARQKASEEARELL--KKYEEARRAG 139
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ T VI ACR+ GV +VAP+EADAQ+A+L G ++EDSDLL G
Sbjct: 140 RKPPGDTR--VDTVISACRSLGVAFVVAPYEADAQLAFLARTGKIAAAVSEDSDLLAHGC 197
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP---------------------LAKFTDAKFRY 159
+++++K+D GNC +R LP + L F F
Sbjct: 198 QQVLFKMDREGNC---ERLSLPLNDRASPDAAQASVSASSAKKLGQLECLRDFDQTMFTA 254
Query: 160 MCILSGCDYW--TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 217
MC+L GCDY I G+G+ A +V + E ++ + K + + +E +
Sbjct: 255 MCVLGGCDYTHDVHINGLGISTACRFVHKL--GKLEAVIQYLFKDEKWRKKLTLPQEVVL 312
Query: 218 SFHNTNLM-FLYQPVYDPVSKEVVPLNPL 245
H ++ F + V+D S VV + L
Sbjct: 313 RGHKMAMVAFTHHRVFDVNSGLVVSASSL 341
>gi|241122956|ref|XP_002403737.1| exonuclease, putative [Ixodes scapularis]
gi|215493512|gb|EEC03153.1| exonuclease, putative [Ixodes scapularis]
Length = 167
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 80/118 (67%)
Query: 28 ATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIV 87
A E +R++++ KA + LI R EA+ +++VD+T +MAL++I+ CR RG+D IV
Sbjct: 47 AKGEKTDGQRETNRQKAKQFLIEGRIKEARECYQRAVDITPEMALDLIKECRRRGIDYIV 106
Query: 88 APFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL 145
AP+EADAQ+AYL G AD VITEDSDL++FG +K+++K+D G +R + L
Sbjct: 107 APYEADAQLAYLTQRGLADVVITEDSDLILFGCEKVVFKMDQGGFGTLYERSAIGKCL 164
>gi|58262688|ref|XP_568754.1| exonuclease [Cryptococcus neoformans var. neoformans JEC21]
gi|57223404|gb|AAW41447.1| exonuclease, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1012
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 107/245 (43%), Gaps = 52/245 (21%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + L H I+ +VFDG LPAK+ TE R K R + KA L R EA+
Sbjct: 32 MYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKTRLENLEKARSLEAQGRMKEAKEAY 91
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ VDVT +MA +I
Sbjct: 92 TRCVDVTPEMAYQLI--------------------------------------------- 106
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K+I+KLD G C ++ R++L + P+ +TD FR M +LSGCDY I G+G+K A
Sbjct: 107 -KVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRMAMLSGCDYLDSIPGIGIKTA 165
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ E L+ I + G+Y+ + +L+ F L FLYQ VYDP +V
Sbjct: 166 HRLMRRFN--SVEKLLQHIRLE---GTYL-VPPTYLSDFAQAELAFLYQRVYDPSLGRLV 219
Query: 241 PLNPL 245
LNPL
Sbjct: 220 HLNPL 224
>gi|302698639|ref|XP_003038998.1| hypothetical protein SCHCODRAFT_231917 [Schizophyllum commune H4-8]
gi|300112695|gb|EFJ04096.1| hypothetical protein SCHCODRAFT_231917 [Schizophyllum commune H4-8]
Length = 341
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + ++ +VFDG LPAK+ E ++R+KR+ A A L + S+A+ H
Sbjct: 1 MHRVRMLRHNGVEPYVVFDGGPLPAKKGMENEQRQKREESMACANMLAAQGKHSQARDHY 60
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
VDVT +MA VI+A R V VAP+EADAQMA+L G +ITEDSDLLV G
Sbjct: 61 LMCVDVTPEMAYQVIKALRVENVKYGVAPYEADAQMAFLERTGAVHAIITEDSDLLVLGC 120
Query: 121 KKIIYKLD 128
K +++KLD
Sbjct: 121 KNVLFKLD 128
>gi|221488566|gb|EEE26780.1| exonuclease, putative [Toxoplasma gondii GT1]
Length = 955
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 36/269 (13%)
Query: 4 IHMLLA---HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
IHM++ H+++ ++VFDG +PAK A +E R++ R +A ELL + EA+
Sbjct: 82 IHMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARQKASEEARELL--KKYEEARRAG 139
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ T VI ACR+ GV +VAP+EADAQ+A+L G ++EDSDLL G
Sbjct: 140 RKPPGDTR--VDTVISACRSLGVAFVVAPYEADAQLAFLARTGKIAAAVSEDSDLLAHGC 197
Query: 121 KKIIYKLDLSGNCCFMDREKLP-----------------SALKMP----LAKFTDAKFRY 159
+++++K+D GNC +R LP SA K+ L F F
Sbjct: 198 QQVLFKMDREGNC---ERLSLPLNDRPSPDAAQASVSASSAKKLGQLECLRDFDQTMFTA 254
Query: 160 MCILSGCDYW--TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 217
MC+L GCDY I G+G+ A +V + E ++ + K + + +E +
Sbjct: 255 MCVLGGCDYTHDVHINGLGISTACRFVHKLG--KLEAVIQYLFKDEKWRKKLTLPQEVVL 312
Query: 218 SFHNTNLM-FLYQPVYDPVSKEVVPLNPL 245
H ++ F + V+D S VV + L
Sbjct: 313 RGHKMAMVAFTHHRVFDMNSGLVVSASSL 341
>gi|159110627|ref|XP_001705564.1| Exonuclease 1 [Giardia lamblia ATCC 50803]
gi|157433651|gb|EDO77890.1| Exonuclease 1 [Giardia lamblia ATCC 50803]
Length = 705
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 37/282 (13%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ + +L V +VFDG LP+K T R++ RD+ A A EA++ L
Sbjct: 59 VQLVGSILPSATFVTLVFDGGSLPSKTFTNSRRKQARDASLALAEAYSSAGDSEEAENAL 118
Query: 61 RQSVDVTHKMALNVIQACRAR-----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
++++ ++ + R ++AP+EADAQ+AYL G D ++T DSD+
Sbjct: 119 KKAISFSNLQVSRIANGVFKRLEKHDNFAVLIAPYEADAQVAYLQKLGMGDVIVTNDSDI 178
Query: 116 LVFGAKKIIYKLDLSGNCCFMDR---------EKL-----------------PSALKMPL 149
L++G +K +YK + F+ E L P+ +
Sbjct: 179 LLYGPRKALYKYNWRTGTGFLSTIDDLYLNGFESLNTPKVSSRVAALVDNTEPNRIATGT 238
Query: 150 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYG---KIG 206
+F+ CILSGCDY + G+GL + V ++ D + +I YG K+
Sbjct: 239 VLARHLRFQQACILSGCDYTPSLVGVGLITS---VNTVGKTDGIVSAAQILRYGHHKKLP 295
Query: 207 SYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESE 248
V+ E++ L F Y V+DP+S EVVP +P E
Sbjct: 296 GDVESFDEYVHLILQAYLTFRYHHVFDPLSFEVVPFHPFNEE 337
>gi|221052892|ref|XP_002261169.1| exonuclease I [Plasmodium knowlesi strain H]
gi|194247173|emb|CAQ38357.1| exonuclease I, putative [Plasmodium knowlesi strain H]
Length = 1205
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K + + H IKVI VFDG LP K A R ++R+ K +A E++ + + +R
Sbjct: 61 KMLECIYEHNIKVIFVFDGEELPEKRAENVIRNERREKAKKEAQEIIKSVKDPRSDVTVR 120
Query: 62 ----QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLV 117
Q++ V+ ++ V+ C+ + +D I++PFEADAQ++YL GY VI+EDSDLLV
Sbjct: 121 RKCTQALSVSKEIIRTVMNFCKTKNIDYIISPFEADAQLSYLCRMGYISCVISEDSDLLV 180
Query: 118 FGAKKIIYKLDLSGNC---CFM 136
+G +++YKL +G C C M
Sbjct: 181 YGCPRVLYKLKNTGECDEICLM 202
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 135 FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG--IKGMGLKKAKDYV--FSIMDP 190
++D+ P L L F+ F MCILSGCDY + I GMG+K A + ++
Sbjct: 280 YLDQFHWPKELD-ELKHFSIDMFLAMCILSGCDYTSDFHITGMGIKTAFSLTSKYKTIEQ 338
Query: 191 DFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
F + KI + ++ L + F + VYD + E + +N
Sbjct: 339 IFSFLISHQKWKRKIPPTLNTLEKMLNKYEEIKNAFFHHQVYDFILCEKISIN 391
>gi|308160669|gb|EFO63144.1| Exonuclease 1 [Giardia lamblia P15]
Length = 702
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 37/284 (13%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ + +L+ V +VFDG LP+K T R++ RD+ A A EA++ L
Sbjct: 59 VQLVGSILSSATFVTLVFDGGSLPSKTFTNSRRKQARDASLALAEAYSSAGDSEEAENAL 118
Query: 61 RQSVDVTHKMALNVIQACRAR-----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
++++ ++ + R ++AP+EADAQ+AYL G D ++T DSD+
Sbjct: 119 KRAISFSNLQVSRIANGVFKRLEKHDNFAVLIAPYEADAQVAYLQKIGMGDVIVTNDSDI 178
Query: 116 LVFGAKKIIYKLDLSGNCCFMDR---------EKLPSA-LKMPLAKFTDA---------- 155
L++G +K +YK + F+ E L + + +A D
Sbjct: 179 LLYGPRKALYKYNWRTGTGFLSTIDDLYLNNFESLNTPKVSSRVATLVDNTKSNGTSTGA 238
Query: 156 ------KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYG---KIG 206
+F+ CILSGCDY + G+GL + V ++ D + + YG K+
Sbjct: 239 TLARHLRFQQACILSGCDYTPSLVGVGLITS---VNTVGKTDGIVSAAQSLRYGHHKKLP 295
Query: 207 SYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMR 250
V+ E++ L F Y V+DP+S EVVP +P E R
Sbjct: 296 GDVESFDEYVHLILQAYLTFRYHHVFDPLSFEVVPFHPFNEEDR 339
>gi|253741618|gb|EES98484.1| Exonuclease 1 [Giardia intestinalis ATCC 50581]
Length = 708
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 43/285 (15%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ I +L V +VFDG LP+K R++ RD++ A A EA++ L
Sbjct: 59 VQLISSILPFATFVTLVFDGGALPSKSFANSRRKQTRDANLALAEVYSSAGDSEEAENAL 118
Query: 61 RQSVDVTHKMALNVIQACR-ARGV----------DCIVAPFEADAQMAYLNIAGYADYVI 109
++++ + N +Q R A GV ++AP+EADAQ+AYL G AD +I
Sbjct: 119 KKAI------SFNSLQVSRIANGVFKRLEKHDHFAVLIAPYEADAQVAYLQKIGMADVII 172
Query: 110 TEDSDLLVFGAKKIIYKLDLSGNCCF--------------MDREKLPSAL-----KMPLA 150
T DSD+L++G +K++YK + F ++ K+PS + M +
Sbjct: 173 TNDSDILLYGPRKVLYKYNWRTATGFLTTIDDLYLNSFESLNAPKVPSRVVDMVDSMECS 232
Query: 151 KFTDA-------KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYG 203
T +F+ CILSGCDY + G+GL + + V + +
Sbjct: 233 GNTTGTTLARHLRFQQACILSGCDYTPSLVGVGLITSVNTVGKTDGIVSAAQSLRYGSHK 292
Query: 204 KIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESE 248
K+ ++ E++ L F Y V+DP+S EVV +P E
Sbjct: 293 KLPGGMESFDEYVHLILQAYLTFRYHHVFDPLSFEVVTFHPFNEE 337
>gi|84996213|ref|XP_952828.1| exonuclease 1 [Theileria annulata strain Ankara]
gi|65303826|emb|CAI76203.1| exonuclease 1, putative [Theileria annulata]
Length = 868
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 86/138 (62%), Gaps = 7/138 (5%)
Query: 1 MKYI----HMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--- 53
MK+I +L+ I IMVFDG +PAK+ RR++R+ +++A E++ ++G
Sbjct: 363 MKFIISMLQLLIKLNITPIMVFDGYEMPAKKNENMMRRERRNKARSEAMEMIHKNKGKIN 422
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
+E Q++ +T ++ VI C+ V +V+P+EADAQ++YL G AD+ I+EDS
Sbjct: 423 TEIMRKCMQAIQITPEIVHRVITICKKINVTVVVSPYEADAQISYLCRTGVADFAISEDS 482
Query: 114 DLLVFGAKKIIYKLDLSG 131
DL+V+G KIIYKL+ G
Sbjct: 483 DLIVYGCPKIIYKLNKEG 500
>gi|303272353|ref|XP_003055538.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463512|gb|EEH60790.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 312
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 115/253 (45%), Gaps = 20/253 (7%)
Query: 5 HMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSV 64
ML I ++VFDG LPAK E++RR +R K E L A Q V
Sbjct: 71 QMLRHFGITPVIVFDGDRLPAKGGEEKERRDRRAEALRKGHERLAARDREGAAFFFAQGV 130
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFE-----ADAQMAYLNIAGYADYVITEDSDLLVFG 119
DV+ MA +I A + G + IVAP+E A G D V TEDSDL+ +G
Sbjct: 131 DVSPSMAHELIAALKREGFEFIVAPYEADAQIAALAAMGGGEGGGVDVVFTEDSDLVAYG 190
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK---FRYMCILSGCDYWTGIKGMG 176
+++KLD F D ++L A PL FT F +C+LSGCD+ ++G+G
Sbjct: 191 CPSVLFKLDK-----FGDAQELRIADGAPL-NFTGWSMDLFLGLCVLSGCDFLPNVRGIG 244
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVS 236
+KKA V ++ + + + + + +F F + VYDP
Sbjct: 245 IKKAHALVAK------HRSIHAVLAVLRGDKKIVVPDGYHENFRRAYWTFKHARVYDPKL 298
Query: 237 KEVVPLNPLESEM 249
+ + PLNP E+
Sbjct: 299 RRLRPLNPTPPEL 311
>gi|269861368|ref|XP_002650394.1| exonuclease I [Enterocytozoon bieneusi H348]
gi|220066165|gb|EED43662.1| exonuclease I [Enterocytozoon bieneusi H348]
Length = 327
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 14/237 (5%)
Query: 8 LAHK-IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L HK I I + DG L +K T R+ ++ + ++ + + A+ +++ V +
Sbjct: 66 LIHKNIIPIFILDGDKLDSKLITYNHRQNLKEKYLSQLKIAIENHDNTRARDLMKRVVTI 125
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + I+ V+ I+AP+EAD+QMAYLN Y D++++EDSDL+ +GAK +++K
Sbjct: 126 TPDFIYDFIKELEILQVEYIIAPYEADSQMAYLNKINYVDHIMSEDSDLICYGAKSVLFK 185
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
N F+D K L F +CILSGCDY IKG+GL A
Sbjct: 186 Y----NGIFVDHYK-SEDLSKAYGSFFAKNILDICILSGCDYINSIKGIGLITAVKL--- 237
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
F+ + I +++ F+ FLY VY+P++K+ + N
Sbjct: 238 -----FQKEKTVEKFVTSLAHKKTIPSDYIEQFYQAKKTFLYHIVYNPINKKRLYFN 289
>gi|387593580|gb|EIJ88604.1| hypothetical protein NEQG_01294 [Nematocida parisii ERTm3]
gi|387597235|gb|EIJ94855.1| hypothetical protein NEPG_00380 [Nematocida parisii ERTm1]
Length = 322
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LLAH I++ VFDG P K+ T + RR ++ + K L EA+S + + + V
Sbjct: 70 LLAHGIELFFVFDGEEHPMKKNTNQKRRAQKAEVQKKVEYFLKRGNLREAKSLMSRCMKV 129
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
M N+ A + + + AP+EAD Q+ YL G+ D + TEDSDL+V+GA K+++K
Sbjct: 130 DVDMVNNLAIALKKMNIPYMTAPYEADPQLVYLERNGHIDCITTEDSDLIVYGANKVLFK 189
Query: 127 LD-LSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L+ L G F DRE++ S +P K + + + L GCDY GI +GL A
Sbjct: 190 LNELQGGEMF-DRERILSRCSIP-TKCLLTQLKEIVSLCGCDYTNGISKVGLITA 242
>gi|281202270|gb|EFA76475.1| 5'3'-exonuclease N- and I-domain-containing protein
[Polysphondylium pallidum PN500]
Length = 188
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I+ML +K+ ++VFDG LP K+ TE++RR KR+ KA A L+ +EA +++
Sbjct: 63 INMLKQNKVIPVIVFDGGALPNKKVTEDERRGKREHMKAMAHAYLMEGNAAEANRCFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VDVT MA +I+ R ++ +VAP+EADAQ+AYL + G D V+TEDSDL+ +G +
Sbjct: 123 VDVTPTMAFLLIKVLRQMNIEYLVAPYEADAQLAYLAVTGQVDAVLTEDSDLVAYGTPNV 182
Query: 124 -IYKL 127
IY+
Sbjct: 183 NIYQF 187
>gi|186479030|ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana]
gi|332192992|gb|AEE31113.1| exonuclease 1 [Arabidopsis thaliana]
Length = 581
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 96 MAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA 155
MA+L I D +ITEDSDL+ FG +II+K+D G+ KLP + L+ F+
Sbjct: 1 MAFLAITKQVDAIITEDSDLIPFGCLRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQ 60
Query: 156 KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEF 215
MCILSGCDY + GMGLK+A + ++ ++ + S V + +
Sbjct: 61 MLLEMCILSGCDYLQSLPGMGLKRAHALITKFK--SYDRVIKHLKY-----STVSVPPLY 113
Query: 216 LTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALG 275
SF L F +Q VYDP +++++ L ++ D + +P+D A +ALG
Sbjct: 114 EESFKRALLTFKHQRVYDPNAEDIIHL----CDISDNLGEDSDFVGPSMPQDIAKGIALG 169
Query: 276 NLDPFS 281
LDPF+
Sbjct: 170 QLDPFT 175
>gi|340503093|gb|EGR29715.1| hypothetical protein IMG5_150060 [Ichthyophthirius multifiliis]
Length = 138
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Query: 1 MKYIHMLLAHKIK-VIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH 59
+K I +L+ IK +++VFDG LP+KE TE+ R+ R+ + +A +L+ + +A
Sbjct: 13 IKRIEDILSFGIKKIVLVFDGHKLPSKEQTEQIRKTNREEARQEALKLMEEGKKEQAFKK 72
Query: 60 LRQSVDVTHKMALNVIQACRAR-GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
SVDVT +MA ++I+ R V+CIV+PFEADAQ+AYL+ Y D V++EDSDLL F
Sbjct: 73 FASSVDVTAQMAYDLIKVFEGRQDVECIVSPFEADAQLAYLSKTNYVDLVVSEDSDLLAF 132
Query: 119 GAKK 122
G K
Sbjct: 133 GYSK 136
>gi|378755169|gb|EHY65196.1| hypothetical protein NERG_01642 [Nematocida sp. 1 ERTm2]
Length = 233
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+AH +++ VFDG P K++T + RR ++ ++K L+ +A+ + + + V
Sbjct: 70 LIAHGVELFFVFDGEEHPMKKSTNQKRRDRKAQMQSKVEHLIARGNIRDARPLMSRCMKV 129
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
M N+ A + V ++AP+EAD Q+ YL G D + TEDSDL+V+GAKKI++K
Sbjct: 130 DADMVSNLAAALKKINVPHMIAPYEADPQLVYLEKKGRIDCITTEDSDLIVYGAKKILFK 189
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG 171
L+ + +REK+ ++ +P+ K + + + LSGCDY G
Sbjct: 190 LNEAHGGELYNREKILASCSLPI-KCLLTQLKEIVSLSGCDYTDG 233
>gi|308812654|ref|XP_003083634.1| 5'-3' exonuclease (ISS) [Ostreococcus tauri]
gi|116055515|emb|CAL58183.1| 5'-3' exonuclease (ISS) [Ostreococcus tauri]
Length = 431
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 142/316 (44%), Gaps = 53/316 (16%)
Query: 16 MVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVI 75
MVFDG LPAK E +RR++R + G A +H + DVT +MA +I
Sbjct: 1 MVFDGDALPAKRREEGERRRRRREALERGRRAEAAGDGRGATTHFAGATDVTPEMARELI 60
Query: 76 QACRARGVDCIVAPFEADAQMAYLNIA----GYADYVITEDSDLLVFGAKKIIYKLDLSG 131
A + + +VAP+EADAQ+A+L G D V TEDSDL+ +G K+++KL+ SG
Sbjct: 61 VALKRENFEYVVAPYEADAQIAHLARTPKERGGVDMVFTEDSDLVAYGCPKVMFKLEKSG 120
Query: 132 NCCFMDREKLPSALKMPLAKFTDAK----------------------------------- 156
+ E + A ++P A TD
Sbjct: 121 DARQFRLEDM-LAGRLPAA--TDENENENAENAATTTATNGTKKRSNGNVLNFQGWGYDL 177
Query: 157 FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDP--DFENALRKINVYGKIGSYVKITKE 214
F +C+ SGCD+ + I G+G+KK +F ++D D + + KI I
Sbjct: 178 FLDLCVFSGCDFLSNIPGLGIKK----MFKLLDKHRDAQAVFTALRADPKINDI--IPNG 231
Query: 215 FLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLAL 274
+ + ++F + VYD S +V L+PL E VF L + QA ++A
Sbjct: 232 YEEDWRKARMIFKHAVVYDRNSHTLVNLSPLPDEA---VFDDLDFLGPKFDDGQAKRIAD 288
Query: 275 GNLDPFSLEEMDQWNP 290
G L+P S E+ ++ P
Sbjct: 289 GELNPISREKFEKTPP 304
>gi|255080028|ref|XP_002503594.1| predicted protein [Micromonas sp. RCC299]
gi|226518861|gb|ACO64852.1| predicted protein [Micromonas sp. RCC299]
Length = 309
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
ML + I ++VFDG LPAK E++RR++R K E L A Q +D
Sbjct: 72 MLRHYGITPVIVFDGDRLPAKGGEEKERRERRAECMRKGHERLAARDRDGATFMFAQGLD 131
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYL------NIAGYADYVITEDSDLLVFG 119
+T MA +I A + G + IVAP+EADAQ+A L G D V TEDSDL+ +G
Sbjct: 132 ITPAMAHELIAALKREGFEFIVAPYEADAQIAALAQLGAKGDPGGVDIVFTEDSDLVAYG 191
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPL--AKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++KL D+ K K PL + +F +C+LSGCD+ I+G+G+
Sbjct: 192 CPLVLFKL---------DKSKAGGGAKGPLNFIGWKHEQFLELCVLSGCDFLPNIRGIGI 242
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
KKA V ++ + + + + F F + VYDP +
Sbjct: 243 KKAHALVAK------HRSVAAVLAVLHGDKKIHVPPGYDDDFRRAFWTFRHARVYDPALR 296
Query: 238 EVVPLNPLESEM 249
+ PLNP+ E+
Sbjct: 297 RLRPLNPMPEEL 308
>gi|299470809|emb|CBN78632.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 387
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 130/302 (43%), Gaps = 68/302 (22%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS------ 54
MK + ML + +K +V DGR P K+ T + RR++R+ + + A S
Sbjct: 60 MKRVRMLRHYGVKPWVVLDGRRTPMKDDTGKQRRQEREKNLSMAKHFRRQAEESSAGPEK 119
Query: 55 -----EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPF------------------- 90
+AQ+ ++S+ VT +M N + A + GV+C+V+P+
Sbjct: 120 EDLLQKAQTFFQKSIHVTRQMVTNAMSALKREGVECMVSPYANGPSTKQAHPCVANDPHY 179
Query: 91 ----------EADAQMAYLNIAGYADYVITEDSDLLVFGA-----KKIIYKLDLSGNC-- 133
EADAQ+AYL +G A VITEDSD+LV+ A ++YK+D G C
Sbjct: 180 GNQVGFFFFTEADAQVAYLVKSGLASAVITEDSDILVYMAAVKSTAPVLYKMDEFGTCKE 239
Query: 134 CFMDREKLPSALKMPLAKFTDA-----------KFRYMCILSGCDYWTGIKGMGLKKAKD 182
D EKL S+L + KF F + L+GCDY I+G+GL A
Sbjct: 240 LGFDPEKL-SSLPGVIGKFGRGLSIFSGEGGGRSFVQLAALAGCDYVDNIRGLGLLTALP 298
Query: 183 YVFSI----MDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
V D + L + GK I H + F + VYDP +K+
Sbjct: 299 IVTKFRRTPADKRVSHILMHVQKMGKT-----IPTGHRDRMHLAEMSFFWHRVYDPRTKK 353
Query: 239 VV 240
V
Sbjct: 354 CV 355
>gi|355686740|gb|AER98169.1| exonuclease 1 [Mustela putorius furo]
Length = 113
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 73/97 (75%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E+ RR++R ++ K +LL + SEA+
Sbjct: 17 MKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQANLLKGKQLLREGKVSEARECF 76
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMA 97
+SV++TH MA VI+A R++GVDC+VAP+EADAQ+A
Sbjct: 77 TRSVNITHVMAHKVIKAARSQGVDCLVAPYEADAQLA 113
>gi|123492232|ref|XP_001326017.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121908925|gb|EAY13794.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 388
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%), Gaps = 18/265 (6%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNV 74
++VFDG+ LPAK T + R+++R A +L R EA + +++V +T
Sbjct: 74 VVVFDGQALPAKLMTNQKRQEERRESLLIAQQLEKERRLPEAFEYYQKAVSITSATVYTW 133
Query: 75 IQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCC 134
I+ R ++ IV+P+EADAQ+AYL +GY D V+TEDSDL+ + ++YKLD S
Sbjct: 134 IKELRNECIEYIVSPYEADAQLAYLARSGYVDCVLTEDSDLIAYRTPLVLYKLDDSLQVT 193
Query: 135 FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFEN 194
+ + + + LK+ T F +CI GCDY I + LK+A + ++EN
Sbjct: 194 SIRYQDVLNFLKL-----TPDNFTSLCIFGGCDYSPSITNLALKRA-----LKLLLEYEN 243
Query: 195 ALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP-------LES 247
I + + + +F F+ FL YDP ++++V L+ L S
Sbjct: 244 PTNVI-IAARSDQKYTVPAKFEDMFNMAFKTFLCARAYDPRTEKLVFLSDPPEEHSFLGS 302
Query: 248 EMRDEVFSQLSLKELELPKDQAFQL 272
++ ++ QL E++ F+L
Sbjct: 303 DIAPDILKQLVKGEIDTVTLGPFEL 327
>gi|156093472|ref|XP_001612775.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801649|gb|EDL43048.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1247
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K + + + IKV+ VFDG LP K+A R+ +R+ K +A E++ + ++
Sbjct: 88 KMLECIYHYNIKVVFVFDGEELPEKKAENVIRKDRREKAKKEAQEIIKSVPNPRSDENVL 147
Query: 62 ----QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLV 117
Q++ V+ ++ VIQ CR + +D I++PFEADAQ++YL GY I+EDSDLLV
Sbjct: 148 KKCIQALSVSKEIINTVIQFCRTKNIDYIISPFEADAQLSYLCRMGYISCAISEDSDLLV 207
Query: 118 FGAKKIIYKLDLSGNC 133
+G +++YKL +G C
Sbjct: 208 YGCPRVLYKLKSTGEC 223
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 135 FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG--IKGMGLKKAKDYV--FSIMDP 190
++D P L L F+ F MCILSGCDY I GMG+K A + + ++
Sbjct: 325 YLDHFHWPEELDK-LKHFSIDMFLAMCILSGCDYTNDFHITGMGIKTAFSLISQYKTIEN 383
Query: 191 DFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
F + KI + ++ +T + FL+ VYD + + +P+N
Sbjct: 384 IFSFLISHDRWKRKIPPNLNTLEKLMTKYEEIKNAFLHHQVYDFILCQNIPIN 436
>gi|71028278|ref|XP_763782.1| exonuclease I [Theileria parva strain Muguga]
gi|68350736|gb|EAN31499.1| exonuclease I, putative [Theileria parva]
Length = 550
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 140/310 (45%), Gaps = 65/310 (20%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG---SEAQSHLRQSVDVTH 68
+ +I VFDG +PAK+ RR++R+ +A+A E++ ++G +E Q++ +T
Sbjct: 82 VSIISVFDGYEMPAKKNENSIRRERRNKARAEALEMIRKNKGKINTEIMRKCMQAIQITP 141
Query: 69 KMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
++ VI C+ V +V+P+EADAQ++YL G AD+ I+EDSDL+V+G KII+KL+
Sbjct: 142 EIVHRVITICKKVNVSVVVSPYEADAQISYLCRTGIADFAISEDSDLIVYGCPKIIFKLN 201
Query: 129 LSG-----NCCFMDREK----LPSALKMPLAKFTDA------------------------ 155
G N F +++ LP+ L T
Sbjct: 202 KEGKGVELNVPFFNKQNKLVHLPAKKTQTLLTNTTGDKPNNVNSSDKNNQKDDKDNKKKG 261
Query: 156 -----------------------KFRYMCILSGCDY--WTGIKGMGLKKAKDYVFSIMDP 190
KF +CILSG DY I G+G+K A +
Sbjct: 262 KETDFADIPYDLDGNMLKLIEYDKFIMICILSGTDYDDKYHIGGIGIKVACKLMLQY--Q 319
Query: 191 DFENALRKINVYGKIGSYVKI-TKEFLTSFHNTNLMFLYQPVYDPVSKEVVPL-NPLESE 248
E L + GK K+ +E L+ + N +FLY VY+P +V + N +E +
Sbjct: 320 TIETLLEYLVGNGKYKLPEKVPHQELLSHYKNIYNIFLYNVVYNPTDNALVHINNKVELD 379
Query: 249 MRDEVFSQLS 258
+ FS L+
Sbjct: 380 GANGYFSYLN 389
>gi|412985227|emb|CCO20252.1| predicted protein [Bathycoccus prasinos]
Length = 728
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 4/132 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
ML ++ ++VFDG LPAK + E RR++R+ K K E L A QS+D
Sbjct: 134 MLKFFGVEPVIVFDGDRLPAKASEEGTRRQRREEAKQKGRERLEQGNREGATFMFTQSLD 193
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYL----NIAGYADYVITEDSDLLVFGAK 121
++ +MAL +I A + G++ +VAP+EADAQ+A+L G D V TEDSDL+ +G +
Sbjct: 194 ISPRMALELIVALKREGIEFVVAPYEADAQIAHLARQSRENGGVDVVFTEDSDLVAYGCE 253
Query: 122 KIIYKLDLSGNC 133
++ +KLD G C
Sbjct: 254 RVCFKLDKFGAC 265
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 147 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIG 206
+ +T F +C +SGCD+ ++ +G KKA +V + D + AL ++ KI
Sbjct: 357 LSFENWTHDDFLGLCAMSGCDFLENVRNVGFKKAHAFV-NKNDRCAKTALEMMSKDPKI- 414
Query: 207 SYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPK 266
+ + ++ + F + +YD K + L PL E+ + +L
Sbjct: 415 ---DVPEGYVEKWQRAVYTFRHALIYDVKEKTLKHLTPLPEELLGKTSDELDFLGKVFED 471
Query: 267 DQAFQLALGNLDPFS 281
A ++A G +DP +
Sbjct: 472 KVAIEIAEGRMDPIA 486
>gi|145336239|ref|NP_174256.2| exonuclease 1 [Arabidopsis thaliana]
gi|332192990|gb|AEE31111.1| exonuclease 1 [Arabidopsis thaliana]
Length = 665
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K IMVFDG LP K E R + R + A+A E S A
Sbjct: 60 MHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++VD++ +A +IQ R VD +VAP+EADAQMA+L I D +ITEDSDL+ FG
Sbjct: 120 SKAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGC 179
Query: 121 KKIIYKLDLS 130
++I L S
Sbjct: 180 LRVIKHLKYS 189
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 207 SYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPK 266
S V + + SF L F +Q VYDP +++++ L ++ D + +P+
Sbjct: 189 STVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHL----CDISDNLGEDSDFVGPSMPQ 244
Query: 267 DQAFQLALGNLDPFS 281
D A +ALG LDPF+
Sbjct: 245 DIAKGIALGQLDPFT 259
>gi|22655212|gb|AAM98196.1| exonuclease, putative [Arabidopsis thaliana]
Length = 665
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K IMVFDG LP K E R + R + A+A E S A
Sbjct: 60 MHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++VD++ +A +IQ R VD +VAP+EADAQMA+L I D +ITEDSDL+ FG
Sbjct: 120 SKAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGC 179
Query: 121 KKIIYKLDLS 130
++I L S
Sbjct: 180 LRVIKHLKYS 189
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 207 SYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPK 266
S V + + SF L F +Q VYDP +++++ L ++ D + +P+
Sbjct: 189 STVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHL----CDISDNLGEDSDFVGPSMPQ 244
Query: 267 DQAFQLALGNLDPFS 281
D A +ALG LDPF+
Sbjct: 245 DIAKGIALGQLDPFT 259
>gi|429329192|gb|AFZ80951.1| XPG I domain-containing protein [Babesia equi]
Length = 582
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 16/195 (8%)
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
Q++ VT ++ VI CR G+ +VAP+EADAQ+AYL +G A I+EDSDLL +G
Sbjct: 43 QAIYVTPEIIFRVIGLCRKMGIQVVVAPYEADAQVAYLCRSGIASCAISEDSDLLAYGCP 102
Query: 122 KIIYKLDLSGNCC-----FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG--IKG 174
++ YKLD G F +K+ + K L + F MC+LSG DY G I+G
Sbjct: 103 RVWYKLDKDGKAFEITLPFQSTDKIVN--KGFLKGLSHKMFIIMCVLSGTDYDDGNHIRG 160
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINV----YGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
MG+K A V + N L + + K+ ++V I + + + +FL+
Sbjct: 161 MGIKIAHKLVMEF--GNVRNILSSLMMNPSWTKKLPTHVSIN-DLALHYERVSSIFLHNI 217
Query: 231 VYDPVSKEVVPLNPL 245
VYD ++ +N +
Sbjct: 218 VYDITKDRLLHINEI 232
>gi|389582322|dbj|GAB64877.1| exonuclease I [Plasmodium cynomolgi strain B]
Length = 1312
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K + + + IKV+ VFDG LP K+A R+ +R+ K +A E I+ + +S R
Sbjct: 61 KMLECINHYNIKVVFVFDGEELPEKKAENLIRKDRREKAKKEAQE--IIKSVANPRSDER 118
Query: 62 ------QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
Q++ V+ + VI C+ + +D I++PFEADAQ++YL GY I+EDSDL
Sbjct: 119 VLKKCIQAISVSKDIINTVIHFCKKKNIDYIISPFEADAQLSYLCRMGYISCAISEDSDL 178
Query: 116 LVFGAKKIIYKLDLSGNC 133
LV+G +++YKL +G C
Sbjct: 179 LVYGCPRVLYKLKSTGEC 196
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 149 LAKFTDAKFRYMCILSGCDYWTG--IKGMGLKKAKDYV--FSIMDPDFENALRKINVYGK 204
L F+ F MCILSGCDY I GMG+K A + + ++ F + K
Sbjct: 335 LKHFSIDMFLAMCILSGCDYTNDFHITGMGIKTAFSLISQYKTIENIFSFLISHDRWKRK 394
Query: 205 IGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
I + ++ L+ + FL+ VYD + + +P+N
Sbjct: 395 IPPNLNTLEKLLSKYEEIKNAFLHHQVYDFILCQNIPIN 433
>gi|145354983|ref|XP_001421753.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581991|gb|ABP00047.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 333
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 131/259 (50%), Gaps = 32/259 (12%)
Query: 5 HMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSV 64
+ML H I+ ++VFDG PAK E RR++R + + A ++
Sbjct: 74 NMLRHHGIEPVIVFDGDRAPAKRGEERARRERRAALLERGERARAAGDKEGAFRAFSGAI 133
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIA----GYADYVITEDSDLLVFGA 120
DVT +MA +I A + + +VAP+EADA +A L + G D V TEDSDL+ +G
Sbjct: 134 DVTPEMARELIVALKREKFEFVVAPYEADATIASLALTAKERGGVDLVFTEDSDLVAYGC 193
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAK------FTDAK---FRYMCILSGCDYWTG 171
++++KL+ SG D ++L A P +K FT F +C+LSGCD+
Sbjct: 194 PRVVFKLEKSG-----DAKELRLATNKPKSKGPPPLDFTGWDYELFLSLCVLSGCDFLDN 248
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKIN-VYGKIGSYVK----ITKEFLTSFHNTNLMF 226
I+G+G+KK +++I+ N R ++ V+ ++ + K I + + + ++F
Sbjct: 249 IRGLGIKK----MYNIL-----NKHRCVDAVFAELRANEKIKDLIAEGYEVEWRKARMIF 299
Query: 227 LYQPVYDPVSKEVVPLNPL 245
+ V+DP + + L P+
Sbjct: 300 KHALVWDPHAGALRHLTPV 318
>gi|167522397|ref|XP_001745536.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775885|gb|EDQ89507.1| predicted protein [Monosiga brevicollis MX1]
Length = 1147
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 110/250 (44%), Gaps = 41/250 (16%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + I ++VFDG LP+KE + R +K S + + + GS H+
Sbjct: 857 MSRVFMLKSFGITPVLVFDGASLPSKET--QPRLRKPSSQVSTSPWIC----GSAVLQHV 910
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
V + N I ++ I+AP+EADAQMAY+ G + VI+EDSDLLVF
Sbjct: 911 AAIKSVQTEGEANCITWYTRLSIEYIIAPYEADAQMAYMYHQGLVEAVISEDSDLLVFNV 970
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI-----KGM 175
+ + +KLD SG + + L GCDY +G+
Sbjct: 971 RDVFFKLDSSGFGIRIQLDNL-----------------------GCDYLPAYSDKHPRGV 1007
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
LK A DY+ + L++ +G + F +F + FL+Q VYDP
Sbjct: 1008 SLKVALDYINRC-----QGNLKETQAL--LGRRHALHDGFSEAFEQADKTFLHQVVYDPR 1060
Query: 236 SKEVVPLNPL 245
K V L PL
Sbjct: 1061 QKRRVHLTPL 1070
>gi|402470077|gb|EJW04530.1| hypothetical protein EDEG_04217 [Edhazardia aedis USNM 41457]
Length = 211
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 75/127 (59%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I L + I+++ VFDG L +KE T +R+ +++ K + L S A+ ++Q
Sbjct: 63 IKKLQRNAIRLVFVFDGDILVSKEKTNNERKIRKEKIKEVVHDYLKAGNLSRAKMLMKQC 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V + +I R ++ I++P+E+DAQ+ YL GY DY++TEDSDL+V+GA KI
Sbjct: 123 VSINSDFLNVIIDLLRRENIEFIISPYESDAQLCYLQKIGYIDYILTEDSDLVVYGADKI 182
Query: 124 IYKLDLS 130
+YK D S
Sbjct: 183 LYKFDGS 189
>gi|294891258|ref|XP_002773499.1| Flap structure-specific endonuclease, putative [Perkinsus marinus
ATCC 50983]
gi|239878652|gb|EER05315.1| Flap structure-specific endonuclease, putative [Perkinsus marinus
ATCC 50983]
Length = 221
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
+L A +V++VFDG LPAK E++R+K+R + E + A+ ++ D
Sbjct: 70 LLSAGVAEVVLVFDGCPLPAKLGVEDERQKRRQEARELGLEYRKAGNHAAARKMFTRAAD 129
Query: 66 VTHKMALNVIQACRARGVD------CIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
VT MA +I R GV IVAP+EADAQ+AYL + G D VI+EDSDLL FG
Sbjct: 130 VTPDMAAELISLIR--GVSNQLAFRWIVAPYEADAQLAYLALNGLVDAVISEDSDLLPFG 187
Query: 120 AKKIIYKLDL 129
+IYKLDL
Sbjct: 188 CPHVIYKLDL 197
>gi|124512040|ref|XP_001349153.1| exonuclease I, putative [Plasmodium falciparum 3D7]
gi|23498921|emb|CAD50999.1| exonuclease I, putative [Plasmodium falciparum 3D7]
Length = 1347
Score = 90.5 bits (223), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 76/128 (59%), Gaps = 4/128 (3%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR----QSVD 65
H IKV+ VFDG LP K+ R+ +R+ K + E++ + + Q++
Sbjct: 69 HNIKVVFVFDGEELPEKKKENMIRKNRREKAKMELQEIISKVKNPRTNEMVLKKCIQAIS 128
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
V+ ++ +V + CR + +D I++P+EADAQ++YL G+ I+EDSDLLV+G +++Y
Sbjct: 129 VSKEIIDSVKEFCRKKNIDYIISPYEADAQLSYLCRMGFISCAISEDSDLLVYGCPRVLY 188
Query: 126 KLDLSGNC 133
KL +G C
Sbjct: 189 KLKNTGEC 196
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 149 LAKFTDAKFRYMCILSGCDYWTG--IKGMGLKKAKDYVFSIMDPD--FENALRKINVYGK 204
L F F MC+LSGCDY I GMG+K A + +F + + F + K
Sbjct: 330 LQYFNIDMFLTMCVLSGCDYSNDFHITGMGIKTAYNLIFQHKNIENIFHFLISNDRWRNK 389
Query: 205 IGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLN 243
I + + + +F FL VYD + ++ +P+N
Sbjct: 390 IPENLNTFDKLMNTFQKIKNAFLNHQVYDFILRKNIPIN 428
>gi|70945133|ref|XP_742419.1| exonuclease i [Plasmodium chabaudi chabaudi]
gi|56521393|emb|CAH77360.1| exonuclease i, putative [Plasmodium chabaudi chabaudi]
Length = 910
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH-- 59
K + + + IKVI VFDG LP K+ R+ +R+ KAK L I+ + +S+
Sbjct: 61 KMLETIHQYNIKVIFVFDGDELPEKKRENSIRKARRE--KAKEEALEIIKKVKHPRSNEL 118
Query: 60 ----LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
Q++ V+ ++ +VI C+ + + I++P+EADAQ++YL G+ I+EDSDL
Sbjct: 119 VIKKCIQAISVSKEIIQSVINFCKKKNIYYIISPYEADAQLSYLCRMGFISCAISEDSDL 178
Query: 116 LVFGAKKIIYKLDLSGNC 133
LV+G +++YK +G C
Sbjct: 179 LVYGCPRVLYKFKNTGEC 196
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 157 FRYMCILSGCDYWTG--IKGMGLKKAKD--YVFSIMDPDFENALRKINVYGKIGSYVKIT 212
F MCILSGCDY I GMG+K A + Y + + F + KI +
Sbjct: 340 FLAMCILSGCDYTNDFHIAGMGIKTAFNLIYEYKTIQNIFSFLISHDKWKNKIPPNLDSL 399
Query: 213 KEFLTSFHNTNLMFLYQPVYDPVSKEVVPL 242
+ + ++ FL VYD + + VP+
Sbjct: 400 DKLMEKYNEIKNAFLQHQVYDFILNKTVPI 429
>gi|68070235|ref|XP_677029.1| exonuclease i [Plasmodium berghei strain ANKA]
gi|56496982|emb|CAI05734.1| exonuclease i, putative [Plasmodium berghei]
Length = 878
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH-- 59
K + + + IKVI VFDG LP K+ R+ +R+ KAK L I+ + +S+
Sbjct: 61 KMLEAIYQYNIKVIFVFDGEELPEKKKENLIRKARRE--KAKDEALEIIKKVKNPRSNEL 118
Query: 60 ----LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
Q++ V+ ++ +VI C+ + + I++P+EADAQ++YL G+ I+EDSDL
Sbjct: 119 VIKKCIQAITVSKEIIQSVINFCKKKNIYYIISPYEADAQLSYLCRMGFISCAISEDSDL 178
Query: 116 LVFGAKKIIYKLDLSGNC 133
LV+G +++YK +G C
Sbjct: 179 LVYGCPRVLYKFKNTGEC 196
>gi|68061681|ref|XP_672841.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490237|emb|CAI02321.1| hypothetical protein PB300668.00.0 [Plasmodium berghei]
Length = 264
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH-- 59
K + + + IKVI VFDG LP K+ R+ +R+ KAK L I+ + +S+
Sbjct: 61 KMLEAIYQYNIKVIFVFDGEELPEKKKENLIRKARRE--KAKDEALEIIKKVKNPRSNEL 118
Query: 60 ----LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
Q++ V+ ++ +VI C+ + + I++P+EADAQ++YL G+ I+EDSDL
Sbjct: 119 VIKKCIQAITVSKEIIQSVINFCKKKNIYYIISPYEADAQLSYLCRMGFISCAISEDSDL 178
Query: 116 LVFGAKKIIYKLDLSGNC 133
LV+G +++YK +G C
Sbjct: 179 LVYGCPRVLYKFKNTGEC 196
>gi|432330136|ref|YP_007248279.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
gi|432136845|gb|AGB01772.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
Length = 333
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH--LR 61
I +A IK + VFDG+ K+AT E+RRK RD+ K E ++RG EA+++ R
Sbjct: 66 ISNFMAKGIKPVFVFDGKPTQLKQATIEERRKLRDTAGEKWRE--AVERGDEAEAYKQAR 123
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
S V + + G+ + AP E +AQ A++ G YVI++D D L+FGA
Sbjct: 124 SSTRVDDTIIRTSRELLGLMGIPVVQAPGEGEAQAAFMVARGDCLYVISQDYDTLLFGAP 183
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLA------KFTDAKFRYMCILSGCDYWTGIKGM 175
++ L +SG R+ + ++ LA K T + + IL G D+ G++G+
Sbjct: 184 TLVRNLTVSGKRKIRGRQITVNPERIVLAETLAGLKLTREQLIEIGILVGTDFNPGVEGV 243
Query: 176 GLKKA 180
G K
Sbjct: 244 GAKTG 248
>gi|331236892|ref|XP_003331104.1| exonuclease 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309310094|gb|EFP86685.1| exonuclease 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 101
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
GV +VA +EADAQ+ YL + G +ITEDSDLLV+GA+ I++ +D SG C ++ R KL
Sbjct: 2 GVKYVVALYEADAQLQYLEMKGEVHGIITEDSDLLVYGARNILFTMDPSGPCIYICRNKL 61
Query: 142 PSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+ + + +FR M +LSGCDY + I
Sbjct: 62 GQVDDKRMGPWDEQQFRQMAMLSGCDYLSRI 92
>gi|294913998|ref|XP_002778227.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239886400|gb|EER10022.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 218
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 38/204 (18%)
Query: 77 ACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 136
A +A GV+ IVA +EADAQ+ Y+ AG D VI+EDSD+L +G K +I KLD +G+C +
Sbjct: 3 ALKALGVEFIVAAYEADAQLGYMYSAGLVDAVISEDSDVLPYGCKVMIAKLDQAGDCQVV 62
Query: 137 D----------------------------REKLPSALKMPLAKFTDAKFRYMCILSGCDY 168
D R K + L L +T F C+L+GCDY
Sbjct: 63 DISWALKGGSKLKEKSNEQEDQRLSFRELRNKYGADL-ANLRDWTKEMFIDACVLAGCDY 121
Query: 169 --WTGIKGMGLKKA-------KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSF 219
+ GMG+K A +D+ ++ E+ RK Y K + F +F
Sbjct: 122 SHACNLSGMGIKTAMKLVNKYRDWQRTLRALKIEDKFRKQLAYEKCAIGFPAFETFRKNF 181
Query: 220 HNTNLMFLYQPVYDPVSKEVVPLN 243
+F + V+DP +K + +
Sbjct: 182 ELARAVFFFHRVFDPRTKRCITMT 205
>gi|401414008|ref|XP_003886451.1| hypothetical protein NCLIV_068500 [Neospora caninum Liverpool]
gi|325120871|emb|CBZ56426.1| hypothetical protein NCLIV_068500 [Neospora caninum Liverpool]
Length = 620
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 127/290 (43%), Gaps = 54/290 (18%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKA-AELLILDRGSEAQSH 59
+ I +L + I+ +VF+G L AK E RR R+ H +A A D GS A+ H
Sbjct: 109 LGKIRLLTSFGIRPFLVFEGGQLEAKAPANESRRLTRERHAVQAVAAHRAGDVGS-ARRH 167
Query: 60 LRQSVDVTHKMALNVIQACRAR-GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
++ V+ + V + ++ GV CI A +EADAQMA L G D V+TED DLL +
Sbjct: 168 AVGAISVSLSLRNFVFRKLQSSPGVICIAAAYEADAQMARLAADGLVDAVLTEDGDLLAY 227
Query: 119 GAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
A+K+I C+L+GCDY I G+G++
Sbjct: 228 QARKLI------------------------------------CVLAGCDYAPNIPGVGVR 251
Query: 179 KAKDYVFSIMDPDFENALRKINVYGK--IGSYV-KITKEFLTSFHNTNLMFLYQPVYDPV 235
A V D L+ + GK +Y +I LT H T +F+ P ++
Sbjct: 252 TAARLV-QKYGADVHAILQDLRASGKPIPNNYAHQIRVALLTYRHQT--VFVISPTWE-- 306
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELEL--PKDQAFQLALGNLDPFSLE 283
+ + PL +++ S +L+ L + D A L LG P +L+
Sbjct: 307 ----IRMAPL-TDLPSASLSPDTLRCLGVVYDDDTARSLCLGFRHPTTLK 351
>gi|8671764|gb|AAF78370.1|AC069551_3 T10O22.7 [Arabidopsis thaliana]
Length = 492
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 71 ALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDLLVFGAKKIIYK 126
A + Q ++ V+ IVAP+EADAQ+AYL+ G VITEDSDLL +G K
Sbjct: 78 ATELFQVLKSENVEFIVAPYEADAQLAYLSSLELEQGGIAAVITEDSDLLAYGCK----- 132
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
A F F MC+L+GCD+ + G+G+ +A ++
Sbjct: 133 -----------------------ANFDQELFTAMCVLAGCDFLPSVPGVGISRAHAFISK 169
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLE 246
+ + K GK+ + ++ +SF +F + VYD +K++ L PL
Sbjct: 170 YQSVELVLSFLKTK-KGKL-----VPDDYSSSFTEAVSVFQHARVYDFDAKKLKHLKPLS 223
Query: 247 SEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
+ + QL +L A +A GN+DP +++ + ++
Sbjct: 224 HNLLNLPVEQLEFLGPDLSPSVAVAIAEGNVDPITMKAFNHFS 266
>gi|326435344|gb|EGD80914.1| hypothetical protein PTSG_01498 [Salpingoeca sp. ATCC 50818]
Length = 971
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 15/226 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLP-AKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH 59
+ + +LL I ++VFDG P KE +RR K++ +A AA LL ++ A
Sbjct: 62 LSKLELLLTRGIVPVVVFDGPISPIMKEGVRRERRDKKEIAQATAACLLDDNQPGLAAEA 121
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
L+ + V+ M + + GV+ ++AP+EADAQ+A+L G D V+TEDSD++ G
Sbjct: 122 LQAGLYVSFAMRTRMARLLAEIGVEHVIAPYEADAQLAFLARTGQIDAVLTEDSDIVALG 181
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG-----IKG 174
K ++ K +G C ++ T + + LSG DY I+G
Sbjct: 182 VKDVLLKFGRNGERCGQR-------IRFEDLGVTLDELQVAAHLSGSDYLPKSSVHHIRG 234
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFH 220
MG +A V + P+ E+ L+ + K + ++ L S +
Sbjct: 235 MGFVRAMKLVRAA--PNLEHLLQALEGSIKYTLHPAFRQQLLNSLY 278
>gi|428672546|gb|EKX73459.1| flap endonuclease-1, putative [Babesia equi]
Length = 746
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 102/235 (43%), Gaps = 23/235 (9%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L IK I VFD K T R+++R+ +A + + ++V V
Sbjct: 76 ILEAGIKPIFVFDSTPPDLKLDTLSKRKERREEAEASLEAAKEAGDSETIKKLVGRTVKV 135
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + Q R G+ + A EA+AQ A L G A V +EDSD LVFG + ++
Sbjct: 136 SKEQNNSAKQLLRLMGIPVVEAKEEAEAQCAQLVQEGIATAVASEDSDSLVFGCRILLR- 194
Query: 127 LDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
+LSG +D+EK+ S L A+FTD CIL GCDY IKG+G K
Sbjct: 195 -NLSGKKVLRIDQEKVLSLLGFTRAQFTD-----FCILCGCDYCGTIKGIGPK------- 241
Query: 186 SIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
NA I Y I +K E L F FL V++ + E
Sbjct: 242 --------NAYSLIKKYKSIEEILKFKGETLPGFEEARRYFLAPQVFEGANPETT 288
>gi|84994172|ref|XP_951808.1| 5'-3' exonuclease [Theileria annulata strain Ankara]
gi|74952859|sp|Q4UFP0.1|FEN1_THEAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|65301969|emb|CAI74076.1| 5'-3' exonuclease, putative [Theileria annulata]
Length = 506
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M LL + IK + VFD + K T + RR+KR+ K + + A+ +
Sbjct: 70 MNRCSKLLEYGIKPVFVFDSKPPELKSKTLDKRRQKREEAKTDFKKAISEGDKESAKKLV 129
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++V VT M + + R G+ I A EA+AQ AYL +V +ED+D LVFG
Sbjct: 130 GRTVKVTKDMNDSAKKLLRLMGIPVIEALEEAEAQCAYLVTKNLCHFVASEDTDTLVFGG 189
Query: 121 KKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
++ + S N +D +K+ L+ +F D CIL GCDY ++G+G K
Sbjct: 190 WFLLRNVTSSANKKIVKVDLQKVLDGLEFNFDQFVD-----FCILCGCDYCDTLEGVGPK 244
Query: 179 KA 180
A
Sbjct: 245 TA 246
>gi|223996849|ref|XP_002288098.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977214|gb|EED95541.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 672
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 79 RARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL--SGNCC-- 134
R R IVAP+EAD Q+AYL G D V+TEDSDL+ G +++Y+L GN
Sbjct: 299 RTRQWPFIVAPYEADGQLAYLANGGLVDLVVTEDSDLIALGVPRLVYRLGGWNGGNSANR 358
Query: 135 ---------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+ R L S+ + L F+D M + +GCDY +KG+G+ A+ V
Sbjct: 359 SSSSGLKGTILQRRDLGSSHGIDLMDFSDGMLATMFVATGCDYCDSLKGVGIITARGIV 417
>gi|401422563|ref|XP_003875769.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492008|emb|CBZ27282.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1013
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 30/149 (20%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKR----------------DSHKAK--------AAELLIL 50
I VFDG +P K T+E+R+++R D+ + + A + L
Sbjct: 118 ICVFDGAGMPMKGGTDEERQRRRVEAFQGALIKLERLYCDARRHRGYTVEGHTAGSRITL 177
Query: 51 DRGS----EAQSHLRQSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYA 105
R S EA L ++VD++ ++A VIQ R R V+CIVAP+EADAQ+AYL GY
Sbjct: 178 PRDSRHYEEAVQLLEKAVDISTELAHAVIQVLREERHVECIVAPYEADAQLAYLCREGYV 237
Query: 106 DYVITEDSDLLVFGAKKIIYKLD-LSGNC 133
+EDSDL+ + +I KLD SG C
Sbjct: 238 AAAASEDSDLIAYYCPCVISKLDTFSGKC 266
Score = 41.6 bits (96), Expect = 0.60, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
Query: 152 FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV---------FSIMDPDFENALRKINVY 202
FT F CILSGCDY ++ +G+KKA + F+ ++ +F ++ Y
Sbjct: 366 FTYESFLLGCILSGCDYVPNLRSIGVKKAFKLIAHATSLRQCFTTLEREFGFPADELRRY 425
Query: 203 GKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLES 247
L +F+ F + VY P+++E+V +PL S
Sbjct: 426 ---------RHRILEAFY----CFAHHLVYSPLTQEIVTYHPLPS 457
>gi|219120899|ref|XP_002185681.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582530|gb|ACI65151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 894
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 23/258 (8%)
Query: 13 KVIMVFDGRHLPAKEATEEDRRKKR-----DSHKAKAAELLILDRGSEAQSHLRQSVDVT 67
++++V DG P K DR +R D + + LDR +A T
Sbjct: 520 EILVVLDGATPPIKRVEVRDRSNRRKQAAQDRDRPADTDEDALDRRFKAFRRAGAGEYYT 579
Query: 68 HKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK-IIYK 126
+ +++Q RA+ + +V+P+E+D Q+A+L GY D + TEDSDL+ +G K I+YK
Sbjct: 580 D-VVESILQGLRAKSIPFLVSPYESDGQLAFLGDKGYIDLIATEDSDLVAYGVKSPILYK 638
Query: 127 L------DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L + + RE L + ++ L FT + + +G DY +KG+G+K A
Sbjct: 639 LVNSLGDEAVPRGVLVRREDLGATTEINLCDFTATMLAVLFVAAGSDYCKKLKGIGVKAA 698
Query: 181 KDYVFSIMDPDFENALRKINV-----YGKIGSYVKITKEFLT----SFHNTNLMFLYQPV 231
V + E + V Y + +T +F F LMF + V
Sbjct: 699 SYIVRAAFYSKREKGCSPLEVVFRKLYSETWDKQTLTDDFKRDYEKGFLAALLMFRHPVV 758
Query: 232 YDPVSKEVVPL-NPLESE 248
+D V + +PLE +
Sbjct: 759 FDSVHGVCATMGDPLEGD 776
>gi|317374903|sp|D3TQJ5.1|FEN1_GLOMM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|289742451|gb|ADD19973.1| 5'-3' exonuclease [Glossina morsitans morsitans]
Length = 382
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQSV 64
LL + IK + VFDG+ P ++ E +R +R KA E + G+EA R+ V
Sbjct: 74 LLENGIKPVYVFDGKP-PISKSGELAKRAERREDAQKALEKAT-EAGNEADMDKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + A + + GV + AP EA+AQ A L AG TED D L FG+ ++
Sbjct: 132 KVTKEHANEAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMDALTFGSGILL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIK 173
L S A KMP+ +F+ AK F +CIL GCDY GI+
Sbjct: 192 RHLTFS------------EARKMPVKEFSYAKVLDGFGLTSQEFIDLCILLGCDYCDGIR 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
G+G K+A + + S D E L KI+ K T ++ +F+ V D
Sbjct: 240 GIGPKRATELMNSY--KDIETILEKID-------RKKYTVPEDWNYQIARELFVNPEVAD 290
Query: 234 PVSKEVVPLNPLE 246
P S E+ +P E
Sbjct: 291 PSSLELKWFDPDE 303
>gi|357441985|ref|XP_003591270.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480318|gb|AES61521.1| Flap endonuclease 1a [Medicago truncatula]
Length = 384
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +K + VFDG+ K + R KR A E L D + + +++V V
Sbjct: 75 LLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEADNKEDIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+AQ A L AG V +ED D L FGA K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSKKIPVMEFDVAKILEELDLTMDQFIDLCILSGCDYCDNIRGI 242
Query: 176 G 176
G
Sbjct: 243 G 243
>gi|357441987|ref|XP_003591271.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480319|gb|AES61522.1| Flap endonuclease 1a [Medicago truncatula]
Length = 369
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +K + VFDG+ K + R KR A E L D + + +++V V
Sbjct: 60 LLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEADNKEDIEKFSKRTVKV 119
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+AQ A L AG V +ED D L FGA K +
Sbjct: 120 TKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGAPKFLRH 179
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 180 L--------MD----PSSKKIPVMEFDVAKILEELDLTMDQFIDLCILSGCDYCDNIRGI 227
Query: 176 G 176
G
Sbjct: 228 G 228
>gi|388498254|gb|AFK37193.1| unknown [Lotus japonicus]
Length = 366
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +K + VFDG+ K+ R KR +E L D + + +++V V
Sbjct: 59 LLESGMKPVYVFDGKPPDMKKQELAKRLSKRAEATEDLSEALKADNKEDIEKFSKRTVKV 118
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+AQ A L AG V +ED D L FGA K +
Sbjct: 119 TKQHNEDYKKLLRLMGVPVVEAPSEAEAQCAALCKAGMVYAVASEDMDSLTFGAPKFLRH 178
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 179 L--------MD----PSSKKVPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNIRGI 226
Query: 176 GLKKAKDYVFSIMDPDFENALRKIN 200
G + A + EN L IN
Sbjct: 227 GGQTALKLIRQ--HGSIENILENIN 249
>gi|393233439|gb|EJD41011.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 195
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAEL-LILDRGSEAQSHL 60
+ + ML + I+ VFDG+ LPAK R R A L + D+ + A ++
Sbjct: 61 RLLLMLRHYDIEPYFVFDGQVLPAKANVTRRRTAVRKEALLCAVTLEMKGDKRTSAVAY- 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ SVDVT +M I+ RA G+ +VAP+E D Q+ +L+ G D V +E+SDL+VFG
Sbjct: 120 KASVDVTTQMVTQTIKILRAAGILYLVAPYEPDPQLVFLDRVGLVDAVYSENSDLVVFGV 179
Query: 121 KKIIYKLDLSGNCCFM 136
+K++ KL +G C +
Sbjct: 180 QKVVCKLQDNGACAIV 195
>gi|403222552|dbj|BAM40684.1| 5'-3' exonuclease [Theileria orientalis strain Shintoku]
Length = 824
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M LL IK + VFD + K T E RR++R+ + + + +
Sbjct: 70 MSRCSKLLECGIKPVFVFDSKPPELKLKTLEKRRQRREEASTSLKQAIAEGDKESIKKLM 129
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++V VT +M + + R GV I AP EA+AQ AYL +V +ED+D L FG
Sbjct: 130 GRTVKVTKEMNDSAKKLLRLMGVPVIEAPEEAEAQCAYLVRNSLCRFVASEDTDTLAFGG 189
Query: 121 KKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
++ + S N +D +K L + +F D CIL GCDY ++G+G K
Sbjct: 190 GYLLRNVTASSNKKIVKVDLQKALKGLDLTFEQFVD-----FCILCGCDYCDTLEGVGPK 244
Query: 179 KA 180
A
Sbjct: 245 TA 246
>gi|146087446|ref|XP_001465826.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134069926|emb|CAM68255.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1015
Score = 77.8 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 30/149 (20%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAA---ELLILD----RGSEAQSH-------- 59
+ VFDG +P K +T+E+R+++R A E L D RG A+ H
Sbjct: 118 VCVFDGAAMPMKGSTDEERQRRRVEAFQGALIKLERLYCDACRRRGYTAEGHATGTRITL 177
Query: 60 -------------LRQSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYA 105
L ++VD++ ++A VIQ + R V+CIVAP+EADAQ+AYL GY
Sbjct: 178 PRDSRPYEEAVQLLEKAVDISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCREGYV 237
Query: 106 DYVITEDSDLLVFGAKKIIYKLD-LSGNC 133
+EDSDL+ + +I KLD SG C
Sbjct: 238 SAAASEDSDLIAYYCPCVISKLDTFSGKC 266
Score = 42.0 bits (97), Expect = 0.46, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 143 SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV---------FSIMDPDFE 193
+++ + FT F CILSGCDY ++ +G+KKA V F+ ++ +F
Sbjct: 357 ASMTATASAFTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLEREFG 416
Query: 194 NALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLES 247
++ Y L +F+ F + VY P+++E+V +PL S
Sbjct: 417 FPADELRRY---------RHRILEAFY----CFAHHLVYSPLTQEIVTYHPLPS 457
>gi|398015714|ref|XP_003861046.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499270|emb|CBZ34343.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1015
Score = 77.8 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 30/149 (20%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAA---ELLILD----RGSEAQSH-------- 59
+ VFDG +P K +T+E+R+++R A E L D RG A+ H
Sbjct: 118 VCVFDGAAMPMKGSTDEERQRRRVEAFQGALIKLERLYCDACRRRGYTAEGHATGTRITL 177
Query: 60 -------------LRQSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYA 105
L ++VD++ ++A VIQ + R V+CIVAP+EADAQ+AYL GY
Sbjct: 178 PRDSRPYEEAVQLLEKAVDISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCREGYV 237
Query: 106 DYVITEDSDLLVFGAKKIIYKLD-LSGNC 133
+EDSDL+ + +I KLD SG C
Sbjct: 238 SAAASEDSDLIAYYCPCVISKLDTFSGKC 266
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 143 SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV---------FSIMDPDFE 193
+++ + FT F CILSGCDY ++ +G+KKA V F+ ++ +F
Sbjct: 357 ASMTATASAFTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLEREFG 416
Query: 194 NALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLES 247
++ Y L +F+ F + VY P+++E+V +PL S
Sbjct: 417 FPADELRRY---------RHRILEAFY----CFAHHLVYSPLTQEIVTYHPLPS 457
>gi|389737981|gb|EIM79187.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 325
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 27/253 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRR----KKRDSHKAKAAELLILDRGSEA 56
M+ I +LA I VFDGR LPAK T R+ + +S K K AE + +
Sbjct: 60 MQTIGSMLACGITPYAVFDGRPLPAKAPTHLRRKDNLERATESLKDKIAEGCKI-----S 114
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
S R + VT + VI+ + V +V+ +EADAQ+ +L + D +ITED D+
Sbjct: 115 HSDYRAVLCVTSEFTKEVIERLKKIDVSLVVSAYEADAQLVWLELHDIVDGLITEDGDVF 174
Query: 117 VFGAKKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+GA +Y+L D N +M R+ SA + F +L+GCDY T I
Sbjct: 175 AYGAST-VYRLWSARDTRVN-RYM-RQDFVSATNQFTLDGANVSFVDTWMLAGCDYGTKI 231
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRK-INVYGKIGSYVKITKEFLTSFHNTNLMFLYQPV 231
G+G K A + ++ F +A+ I+ + SY+++ L++ + V
Sbjct: 232 PGVGWKTA---LKALQGCSFASAVEILISDRAEGESYMRLAA-------TVRLIYAHHCV 281
Query: 232 YDPVSKEVVPLNP 244
+D +E+V L P
Sbjct: 282 WDVEQEEMVCLTP 294
>gi|157869844|ref|XP_001683473.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126538|emb|CAJ04855.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1013
Score = 77.8 bits (190), Expect = 8e-12, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 30/149 (20%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAA---ELLILD----RGSEAQSH-------- 59
+ VFDG +P K T+E+R+++R A E L D RG A+ H
Sbjct: 118 VCVFDGAAMPMKGGTDEERQRRRVEAFQGALIKLERLYCDARRRRGYTAEGHATGTRITL 177
Query: 60 -------------LRQSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYA 105
L ++VD++ ++A VIQ + R V+CIVAP+EADAQ+AYL GY
Sbjct: 178 PRDSRPYEEAVQLLEKAVDISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCREGYV 237
Query: 106 DYVITEDSDLLVFGAKKIIYKLD-LSGNC 133
+EDSDL+ + +I KLD SG C
Sbjct: 238 AAAASEDSDLIAYYCPCVISKLDTFSGKC 266
Score = 42.0 bits (97), Expect = 0.42, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
Query: 152 FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV---------FSIMDPDFENALRKINVY 202
FT F CILSGCDY ++ +G+KKA V F+ ++ +F ++ Y
Sbjct: 366 FTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLEREFGFPADELRRY 425
Query: 203 GKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLES 247
L +F+ F + VY P+++E+V +PL S
Sbjct: 426 ---------RHRILEAFY----CFAHHLVYSPLTQEIVTYHPLPS 457
>gi|363806970|ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|255640175|gb|ACU20378.1| unknown [Glycine max]
Length = 382
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR +E L + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETANKEDIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+AQ A L AG V++ED D L FGA K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYGVVSEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSKKIPVMEFEVAKILEELNMTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 G 176
G
Sbjct: 243 G 243
>gi|154337970|ref|XP_001565211.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062258|emb|CAM36646.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1009
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 30/149 (20%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAA---ELLILD----RGSEAQSH-------- 59
+ VFDG +P K T+E+R+++R A E L D RG A+ H
Sbjct: 118 VCVFDGAEMPMKGGTDEERQRRRAEAFQGALTKLEQLYCDARRRRGCTAEDHADGARIAL 177
Query: 60 -------------LRQSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYA 105
L ++ D++ ++A VIQ + R V+CIVAP+EADAQ+AYL GY
Sbjct: 178 PRDTRPYEEAVQLLAKAADISTELAHAVIQVLKEERHVECIVAPYEADAQLAYLCRQGYV 237
Query: 106 DYVITEDSDLLVFGAKKIIYKLD-LSGNC 133
+EDSDL+ + II KLD SG C
Sbjct: 238 VAAASEDSDLIAYYCPCIISKLDTFSGKC 266
Score = 41.2 bits (95), Expect = 0.77, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 152 FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV---------FSIMDPDFENALRKINVY 202
FT F CILSGCDY ++ +G+KKA V F+ ++ +F ++ Y
Sbjct: 363 FTYESFLLGCILSGCDYVPNLRSIGVKKAFKLVAHATSLRQCFTTLEREFGFPADELRRY 422
Query: 203 GKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLESEMR 250
L +F+ F + VY P+++E+V +PL R
Sbjct: 423 ---------RHRILEAFY----CFAHHLVYSPLTQEIVTYHPLPGTDR 457
>gi|312385968|gb|EFR30352.1| hypothetical protein AND_00127 [Anopheles darlingi]
Length = 385
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 92/195 (47%), Gaps = 35/195 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
LL + IK + VFDG+ P ++ E ++R +R KA LD+ +EA +
Sbjct: 74 LLENGIKPVYVFDGKP-PELKSGELNKRAERREEAQKA-----LDKATEAGAVEDIEKFN 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + A + R GV + AP EA+AQ A L AG TED D L FG+
Sbjct: 128 RRLVKVTKQHANEAKELLRLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F T +F MCIL GCDY
Sbjct: 188 NILLRHLTFS------------EARKMPVQEFHYEKVLKGFELTADEFIDMCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
I+G+G KKA + +
Sbjct: 236 DTIRGIGPKKAIELI 250
>gi|313242146|emb|CBY34317.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L H I I VFDG LP+K+AT + RR +R+ ++ +A + L G A ++
Sbjct: 63 LKRLELLEKHNITPICVFDGEKLPSKKATNDQRRARREENRQRA--ITALKNGESAWNYF 120
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVIT 110
Q++ ++ + V C+ +G I AP+EADAQ+A+L+ D VIT
Sbjct: 121 IQAIRISPAITQGVKNMCKEKGYMVITAPYEADAQLAWLSREKRVDAVIT 170
>gi|195431204|ref|XP_002063637.1| GK21315 [Drosophila willistoni]
gi|317374897|sp|B4MR84.1|FEN1_DROWI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194159722|gb|EDW74623.1| GK21315 [Drosophila willistoni]
Length = 388
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA + G EA+ R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TEAGDEAEIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSSK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTG 171
++ L S A KMP+ +FT K F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFTYEKLLQGLELNQREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + S D
Sbjct: 238 IKGIGPKRAIELINSYRD 255
>gi|326437161|gb|EGD82731.1| hypothetical protein PTSG_03380 [Salpingoeca sp. ATCC 50818]
Length = 531
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K + +L I ++VFDG L AK R+++R + + +A +L + EA+ R
Sbjct: 61 KRLALLTTAGITPVVVFDGAPLAAKAEENARRQRQRKAAREEALKLRKQGKVHEARKASR 120
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+++ V+ M ++ ++ +VAP+EADAQ+A++ G V+++DSD+L FG
Sbjct: 121 RALHVSRDMQRTLMAMLDRLNIEYVVAPYEADAQLAFMARTGRVAAVLSDDSDMLCFGVP 180
Query: 122 KIIYKLDLSGNCCFMDREKLPS------ALKMPLAKFTDAKFRYMCILSGCDY-----WT 170
++ L SG C + L +++ L + +LSGCDY
Sbjct: 181 HVLRNLRSSGTCDSIQFHHLQELTLTRYGVRLSLRDLRLDTLQLAAVLSGCDYLPKHSGA 240
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVK----ITKEFLTSFHNTNLMF 226
I G+G++ A YV K Y I +++ IT + + L F
Sbjct: 241 HIHGIGMRTAM-YV-----------THKYKTYTDIMQHLRQNYIITDDLDAKVRHAMLAF 288
Query: 227 LYQPVYDPVSKEVVPLNPLESEMRDE 252
Q V+D ++ L PL E D+
Sbjct: 289 TCQVVWDDTAQARRRLPPLAPEPADD 314
>gi|403347702|gb|EJY73284.1| FEN-1 nuclease [Oxytricha trifallax]
Length = 392
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 14/227 (6%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQSVDVT 67
H IK I VFDG+ K T E R++ RD KA+ + + G E + +++V VT
Sbjct: 73 HGIKAIWVFDGKPPELKSRTLEKRKENRD--KAEDEKEEAQEDGDEFKMAKMAQRTVKVT 130
Query: 68 HKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKL 127
M + + +A G + AP EA+A AYL G A ++ED D L FG+ +I +
Sbjct: 131 KSMVEDAKRLVKAMGFPVVHAPGEAEAFCAYLVKEGKAFATVSEDMDSLTFGSPFMIRGM 190
Query: 128 DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSI 187
++ ++ ++ + + K T +F +CI+ GCDY I G+G KA Y F
Sbjct: 191 SMAKQKAGIELMQIELSKVLFSLKLTYEEFVDLCIICGCDYTATITGIGAVKA--YKFIT 248
Query: 188 MDPDFENALRKIN-----VYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
E L+ I+ GK Y+ I ++F + +FL+Q
Sbjct: 249 EYRTIEKVLKAIDKEIFSSKGKKAKYI-IPEDF--PYQEARELFLHQ 292
>gi|195123149|ref|XP_002006071.1| GI18754 [Drosophila mojavensis]
gi|317374891|sp|B4KNM1.1|FEN1_DROMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193911139|gb|EDW10006.1| GI18754 [Drosophila mojavensis]
Length = 388
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQSV 64
LL + IK + VFDG+ P +A E +R +R KA ++ D G EA+ R+ V
Sbjct: 74 LLDNGIKPVYVFDGKP-PDLKAGELAKRAERREEAEKALKVAT-DAGDEAEIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + + + + GV + AP EA+AQ A L AG TED D L FG+ K++
Sbjct: 132 RVTKEHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSCKLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIK 173
L S A KMP+ +F T +F +CIL GCDY IK
Sbjct: 192 RYLTYS------------EARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCDSIK 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINV 201
G+G K+A + + + D E L I+
Sbjct: 240 GIGPKRAIELIKTYR--DIETILENIDT 265
>gi|308504826|ref|XP_003114596.1| CRE-CRN-1 protein [Caenorhabditis remanei]
gi|308258778|gb|EFP02731.1| CRE-CRN-1 protein [Caenorhabditis remanei]
Length = 382
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K E R ++R + E EA+ R+ V V
Sbjct: 74 MIDNGIKPVYVFDGKPPDMKSGELEKRSERRAEAEKALTEAKEKGDAKEAEKFERRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + +V Q G+ + AP EA+AQ A+L AG TED D L FG+
Sbjct: 134 TKQQNEDVKQLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDMDALTFGS------ 187
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
C + P + K+P+ +F T+ +F +CIL GCDY I+G+
Sbjct: 188 ------CVLLRHLLAPESKKIPIKEFHLARILEEMKLTEEEFIDLCILLGCDYCGTIRGV 241
Query: 176 GLKKAKDYV 184
G K+A + +
Sbjct: 242 GPKRAVELI 250
>gi|219124517|ref|XP_002182548.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405894|gb|EEC45835.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 794
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 48/282 (17%)
Query: 2 KYIHMLL--AHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--- 56
K H +L A K+ +V DG P K T +DR ++R + A+A R +
Sbjct: 70 KRCHEILTYARIRKIYLVMDGARCPLKVVTNDDRERRRQENLAEARVFRQQKRPDKMYEK 129
Query: 57 -QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
++ ++ D+ +A N+ A + V+ + AP+EADAQ+ L + G +ITEDSD+
Sbjct: 130 YKACIKVKADLAAAVAQNIASAFPGK-VELVWAPYEADAQLVKLAMNGTVQAIITEDSDV 188
Query: 116 LVFGAK-----KIIYKLDLSGNCC-------FMD-----------REKLPSALKMPLAKF 152
LV+ A +++KLD + C +D K S ++ + F
Sbjct: 189 LVYAATCETTVSVLFKLDRNTGSCDIISMAWLLDPTETLVNPSKANPKKASGIEQIVDAF 248
Query: 153 TDAKFR----------YMCILSGCDYWTG-IKGMGLKKAKDYVFSIMDPD----FENALR 197
+ R CIL+GCDY + G+G A +V S M D F + L+
Sbjct: 249 VSRQLRDPGRGVRLFVQACILTGCDYSPNQLSGVGFVNAFKHVQSAMHKDSKDRFRHVLK 308
Query: 198 KINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEV 239
+ K + +E L + +F Y PV +P + V
Sbjct: 309 MLPRKAKDHLDPVVYEELLA---QSESVFYYHPVREPDGRVV 347
>gi|71031676|ref|XP_765480.1| flap endonuclease 1 [Theileria parva strain Muguga]
gi|122052062|sp|Q4N3S6.1|FEN1_THEPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|68352436|gb|EAN33197.1| flap endonuclease 1, putative [Theileria parva]
Length = 494
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M L + IK + VFD + K T E RR++R+ A + + + +
Sbjct: 70 MNRCSKFLEYGIKPVFVFDSKPPELKTKTLEKRRQQREEANASLKKAISEGDKESVKKLV 129
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++V V+ +M + + R GV I A EA+AQ AYL +V +ED+D LVFG
Sbjct: 130 GRTVKVSKEMNESAKKLLRLMGVPVIEALEEAEAQCAYLVTKNLCRFVASEDTDTLVFGG 189
Query: 121 KKIIYKLDLSGNCCFM--DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
++ + S + + D +K+ L+ +F D CIL GCDY ++G+G K
Sbjct: 190 AFLLRNVASSSSKKILKVDLQKVLDGLEFNFDQFID-----FCILCGCDYCDTLEGVGPK 244
Query: 179 KA 180
A
Sbjct: 245 TA 246
>gi|355570852|ref|ZP_09042122.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
gi|354826134|gb|EHF10350.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
Length = 333
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L I+ + ++DG K+ T +RR R+ K E L+ EA R S +
Sbjct: 69 MLEKGIRTVWIYDGTPPSFKQDTVAERRAVREKAGEKWKEALLRGDTEEAYRQARSSSRI 128
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ Q G+ I AP E +AQ AY+ + G A YV+++D D L+FGA ++
Sbjct: 129 DEEIIATSRQLITLLGLPWIQAPSEGEAQAAYMVMRGDARYVVSQDYDTLLFGAPVLVRN 188
Query: 127 LDLSGNCCFMDR------EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +SG R E++ + + + + + +L G D+ GI+G+G K A
Sbjct: 189 LTVSGKRKVRGRTLAIMPERIVLSSVLTGLEISREDLIRVGLLVGTDFNPGIRGVGAKTA 248
Query: 181 KDYVFSIMDPDFENALRK 198
+ + + +FE +R+
Sbjct: 249 ---LRMVRNGEFEQVMRE 263
>gi|296089863|emb|CBI39682.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +K + VFDG+ K+ R +R E L E + +++V V
Sbjct: 75 LLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETGNKEEIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV I AP EA+AQ A L +G V +ED D L FGA K +
Sbjct: 135 TKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F T +F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 GLKKAKDYVFSIMDPDFENALRKIN 200
G + A + EN L IN
Sbjct: 243 GGQTALKLIRQ--HGSIENILENIN 265
>gi|58390636|ref|XP_317855.2| AGAP011448-PA [Anopheles gambiae str. PEST]
gi|74802123|sp|Q7Q323.2|FEN1_ANOGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55237026|gb|EAA13029.2| AGAP011448-PA [Anopheles gambiae str. PEST]
Length = 383
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 91/195 (46%), Gaps = 35/195 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
LL + IK + VFDG+ P ++ E ++R +R KA LD+ +EA +
Sbjct: 74 LLENGIKPVYVFDGKP-PDLKSGELNKRAERREEAQKA-----LDKATEAGATEDIEKFN 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT A + R GV + AP EA+AQ A L AG TED D L FG+
Sbjct: 128 RRLVKVTKHHANEAKELLRLMGVPYVEAPCEAEAQCAALVRAGKVYATATEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F T +F +CIL GCDY
Sbjct: 188 NILLRHLTFS------------EARKMPVQEFAYEKVLKGFELTQDEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
I+G+G KKA + +
Sbjct: 236 DTIRGIGPKKAIELI 250
>gi|356575281|ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
Length = 382
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR +E L + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETANKEDIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+AQ A L AG V +ED D L FG+ K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGSPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSKKIPVMEFEVAKILEELNMTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 G 176
G
Sbjct: 243 G 243
>gi|340717150|ref|XP_003397050.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Bombus
terrestris]
Length = 381
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSV 64
L+ IK + VFDG+ L E + D R+ +AAE + + R+ V
Sbjct: 74 LVEQGIKPVYVFDGKPPDLKGGELAKRDERRDETQKLLQAAEEA--GNAKDIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + AL Q + G+ I AP EA+AQ A L AG TED D L FG ++
Sbjct: 132 KVTKEHALETKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNILL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIK 173
+L S A KMP+ +F +F +CI+ GCDY + IK
Sbjct: 192 RRLTFS------------EARKMPVQEFHFDKVLEDLGLNHNEFIDLCIMLGCDYTSSIK 239
Query: 174 GMGLKKAKDYV 184
G+G K+A + +
Sbjct: 240 GVGPKRAIELI 250
>gi|198417766|ref|XP_002129714.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 380
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL + IK + VFDG+ K R ++R+ + + A+ ++ + + R+ V V
Sbjct: 74 LLGNGIKPVFVFDGKPPQMKSGELAKRAERREQAEKELAKAQESGEAADVEKYSRRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R G+ + AP EA+AQ A L +G TED D L F + +++
Sbjct: 134 TREHMDDCKKLLRLMGIPVVEAPTEAEAQCASLVKSGKVYATATEDMDALTFHSSRLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A KMP+ +F T +F +CIL GCDY I+G+
Sbjct: 194 LTFS------------EARKMPIQEFVYEKVLEEMEMTHEQFVDLCILLGCDYCEHIRGV 241
Query: 176 GLKKAKDYV 184
G K+A D +
Sbjct: 242 GPKRAYDLI 250
>gi|283481241|emb|CAZ69357.1| putative endonuclease [Emiliania huxleyi virus 99B1]
Length = 358
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ P + E D+R +R +H +EL + D +E + ++SV
Sbjct: 75 LIEAGIKPVYVFDGKP-PVLKKKELDKRNERQAHAL--SELKLTDDATEVEKQEKRSVRA 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + V + G+ + AP EA+A A G A TED D L FG+ +I
Sbjct: 132 TREHSEEVKKMLTLMGIPVVQAPCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
Query: 127 LDLSGNCCFMDREKLPSA-LKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ + D++K P+ +P T +F +CILSGCDY IKG+G +A
Sbjct: 192 INST------DQKKQPTVEYSLPNILNDMGITMDQFIEICILSGCDYTKTIKGIGPTRA 244
>gi|268564494|ref|XP_002639126.1| C. briggsae CBR-CRN-1 protein [Caenorhabditis briggsae]
gi|317374879|sp|A8XL25.1|FEN1_CAEBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 382
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K E R ++R + E EA+ R+ V V
Sbjct: 74 MIDNGIKPVYVFDGKPPDMKSGELEKRTERRAEAEKALTEAKEKGDAKEAEKFERRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + V Q G+ + AP EA+AQ A L AG TED D L F
Sbjct: 134 TKQQNEEVKQLLGLMGIPVVEAPCEAEAQCANLVKAGKVYGTATEDMDALTF-------- 185
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
G+C + P A K+P+ +F T +F +CIL GCDY I+G+
Sbjct: 186 ----GSCVLLRHLLAPEAKKIPIKEFHLARVLEEMQLTKDQFIDLCILLGCDYCGTIRGI 241
Query: 176 GLKKAKDYV 184
G KKA + +
Sbjct: 242 GPKKAVELI 250
>gi|156937484|ref|YP_001435280.1| flap endonuclease-1 [Ignicoccus hospitalis KIN4/I]
gi|166973698|sp|A8AAC1.1|FEN_IGNH4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156566468|gb|ABU81873.1| flap endonuclease 1 [Ignicoccus hospitalis KIN4/I]
Length = 350
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLRQSV 64
+L + IKV VFDG P K T E R+++ +A+ + RG EA+ + + S
Sbjct: 72 MLENGIKVAYVFDG--APPKLKTREIERRQKLKQEAEKKYEEAVRRGDVEEARKYAQMSA 129
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+T +M + A GV + AP E +AQ AY+ G ++D D L+FG+ +++
Sbjct: 130 KLTKEMVEEAKRLLEAMGVPWVQAPSEGEAQAAYMAAKGDVWASASQDYDSLLFGSPRLV 189
Query: 125 YKLDLSGNCCFMDREKLPS------------ALKMPLAKF--TDAKFRYMCILSGCDYWT 170
L +SG R KLP+ LK L + T + + +L G DY
Sbjct: 190 RNLAVSG------RRKLPNKNVYVEVKPEEITLKCVLEELGITREQLVAIAVLIGTDYTP 243
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINV 201
G+KG+G K A YV S D E L + V
Sbjct: 244 GVKGVGPKTALRYVKSY--GDLERVLTALGV 272
>gi|359487708|ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
Length = 384
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +K + VFDG+ K+ R +R E L E + +++V V
Sbjct: 75 LLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETGNKEEIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV I AP EA+AQ A L +G V +ED D L FGA K +
Sbjct: 135 TKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F T +F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 GLKKAKDYVFSIMDPDFENALRKIN 200
G + A + EN L IN
Sbjct: 243 GGQTALKLIR--QHGSIENILENIN 265
>gi|284162570|ref|YP_003401193.1| XPG I domain-containing protein [Archaeoglobus profundus DSM 5631]
gi|284012567|gb|ADB58520.1| XPG I domain protein [Archaeoglobus profundus DSM 5631]
Length = 335
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 23/192 (11%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
IK I VFDG K+ E RRK R+ + K L + +EA+ + +Q+V V +
Sbjct: 73 IKPIFVFDGEPPEFKKKEIERRRKIREEAEIKWKTALDI---AEARKYAQQAVRVDEYII 129
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
+ + G+ + AP E +AQ AY+ G ADY ++D D L+FG+ + L+
Sbjct: 130 ESSKKLLNLMGIPIVQAPSEGEAQAAYIVRKGDADYTGSQDYDSLLFGSPR------LAR 183
Query: 132 NCCFMDREKLPSA------------LKMPLAKF--TDAKFRYMCILSGCDYWTGIKGMGL 177
N R KLP L+ L K T + + +L G DY G++G+G+
Sbjct: 184 NLAITGRRKLPGKNVYTEVKPEVIDLEYNLKKLGITREQLIDIALLVGTDYNEGVEGIGV 243
Query: 178 KKAKDYVFSIMD 189
KKA YV + D
Sbjct: 244 KKAYKYVKAYGD 255
>gi|374628642|ref|ZP_09701027.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
gi|373906755|gb|EHQ34859.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
Length = 333
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNV 74
+ +FDG+ K T +RR ++ +A E L A S+ R S V ++ +
Sbjct: 77 VFIFDGKPPEFKNRTISERRAAKEQAEAGLKEALKAGDNQAAFSYARSSTRVDREIIDSS 136
Query: 75 IQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLS---- 130
+ G+ + AP E +AQ A++ G DY +++D D L+FGA+K++ L +S
Sbjct: 137 KRLLSLMGIPYLDAPSEGEAQAAFMVSEGIVDYSVSQDYDSLLFGAEKLVRNLTVSRKRK 196
Query: 131 --GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIM 188
G ++ E + + + T + + IL G D+ +GI+G+G KKA V
Sbjct: 197 IRGRTITVNPETISLDEVLSGLEITREQLVEIGILIGTDFNSGIRGIGPKKALKIV---R 253
Query: 189 DPDFENAL 196
D FEN L
Sbjct: 254 DGTFENIL 261
>gi|291230420|ref|XP_002735164.1| PREDICTED: exonuclease-like [Saccoglossus kowalevskii]
Length = 155
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 95 QMAYLNIAGYADYV-ITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALKMPLAKF 152
QMAYL V TE+SD++V+GA K+ K D S F+ + +KLP L +
Sbjct: 38 QMAYLCKNRCGRLVSFTENSDVIVYGASKVFTKTDFSSGTSFLVEADKLPQCFN--LENW 95
Query: 153 TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSY 208
T K RY+CIL+GCDY I G+G+K+A ++V+ I + D + ++NV I Y
Sbjct: 96 TFTKVRYICILAGCDYLPSIPGIGIKRAIEFVYKIKEKD----ILQVNVVLFITCY 147
>gi|156094601|ref|XP_001613337.1| flap exonuclease [Plasmodium vivax Sal-1]
gi|317376189|sp|A5KAL1.1|FEN1_PLAVS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148802211|gb|EDL43610.1| flap exonuclease, putative [Plasmodium vivax]
Length = 623
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ + AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTRKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGNCCFMDREKLPS----------------ALKMPLAKFTDAKFRYMCILSGC 166
+I L+ + + ++ K S L + + +F D CIL GC
Sbjct: 192 LIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFID-----FCILCGC 246
Query: 167 DYWTGIKGMGLKKAKDYV 184
DY IKG+G K A + +
Sbjct: 247 DYCDTIKGIGSKTAYNLI 264
>gi|194756700|ref|XP_001960614.1| GF13444 [Drosophila ananassae]
gi|317374888|sp|B3MDA3.1|FEN1_DROAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190621912|gb|EDV37436.1| GF13444 [Drosophila ananassae]
Length = 388
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSV 64
LL + IK + VFDG+ L + E + R++ KAA D +E + R+ V
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAATEAGDD--AEIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + A + + GV + AP EA+AQ A L AG TED D L FG+ K++
Sbjct: 132 RVTKEHAREAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTKLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTGIK 173
L S A KMP+ +F+ + +F +CIL GCDY IK
Sbjct: 192 RYLTYS------------EARKMPVKEFSYEKLLDGLGVNNREFIDLCILLGCDYCESIK 239
Query: 174 GMGLKKAKDYVFSIMD 189
G+G K+A + + + D
Sbjct: 240 GIGPKRAIELINNYRD 255
>gi|302843818|ref|XP_002953450.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300261209|gb|EFJ45423.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 397
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
+L IK + VFDG+ K+ D+ R +A A E L++ EA + +
Sbjct: 75 MLEAGIKPVYVFDGKPPQLKQ----DQLAMRSERRADANE--ALEKAKEAGDAEAVEKYS 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SV VT + + + R GV + AP EA+AQ A + AG + TED D L FGA
Sbjct: 129 KRSVRVTKEHNEDCKRLLRLMGVPVVEAPSEAEAQCAEMAKAGLVYGLATEDMDALTFGA 188
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++I L ++ + + +++ A+ + D +F MCIL GCDY I+G+G +A
Sbjct: 189 PRVIRHL-MAPSSSNVPVQEIDRAVALQELGLDDDQFIDMCILMGCDYCGTIRGIGAVRA 247
>gi|401413646|ref|XP_003886270.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
gi|325120690|emb|CBZ56245.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
Length = 545
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL I+ + VFDG+ K RR+ R+S + A + E + + +SV V
Sbjct: 76 LLEQGIRPVYVFDGKPPELKSGELAKRREVRESAQVAAEKAREEGNAEELRKQIVRSVRV 135
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + ++ + R G+ + AP EA+AQ A L TED+D L FGA ++I
Sbjct: 136 SQQHNDDIKRLLRLMGLPVVEAPCEAEAQCAELTKHKKVWATATEDADALTFGATRLIRN 195
Query: 127 LDLSGNCCFMDREKLPSALKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S + +P KF+ +F CIL GCDY +KG+G K A
Sbjct: 196 LTFSERTGSSASASAILVIDLPTLLEELKFSQEQFIDFCILCGCDYCGTLKGVGAKTA 253
>gi|195025439|ref|XP_001986060.1| GH21157 [Drosophila grimshawi]
gi|317374890|sp|B4J6M4.1|FEN1_DROGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193902060|gb|EDW00927.1| GH21157 [Drosophila grimshawi]
Length = 388
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQSV 64
LL + IK + VFDG K R ++RD +A+ A + G EAQ R+ V
Sbjct: 74 LLDNGIKPVYVFDGAPPDMKSGELAKRAERRD--EAEKALKAATEAGDEAQIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + + + + GV + AP EA+AQ A L AG TED D L FG+ K++
Sbjct: 132 RVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSCKLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIK 173
L S A KMP+ +F T +F +CIL GCDY I+
Sbjct: 192 RYLTYS------------EARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCESIR 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINV 201
G+G K+A + + S D E L I+
Sbjct: 240 GVGPKRAIELIKSYR--DIETILENIDT 265
>gi|361128942|gb|EHL00867.1| putative Exonuclease 1 [Glarea lozoyensis 74030]
Length = 432
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M + ML + +VFDG +LP+K ATE +R K+R+ K EL + +A +
Sbjct: 48 MHRVRMLQHFGVVPFLVFDGDYLPSKAATESERSKRREESKRSGYELESAGKLQQAYAEF 107
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQM 96
+++VDVT +MA +I + GV +VAP+EADAQM
Sbjct: 108 QKAVDVTPEMARQLIDELKITGVQYLVAPYEADAQM 143
>gi|402468038|gb|EJW03248.1| hypothetical protein EDEG_00228 [Edhazardia aedis USNM 41457]
Length = 362
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL--RQSV 64
++ IK + VFDG K + E ++RK++ AK E+ L+ G + Q ++ V
Sbjct: 74 IVTSGIKPLFVFDGLPPELKLSHELEKRKEKRDAAAKEYEMA-LETGDKEQIEKFDKRKV 132
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT K + + V +VAP EA+A AYL I G D V TED D L FGA ++
Sbjct: 133 KVTKKHVDDCKKLLDLMKVPYVVAPSEAEAYAAYLCIKGVVDAVATEDMDALTFGAPILL 192
Query: 125 YKLDLSGNCCFMDREKLPSA---LKMPLA--KFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
L+ + N +KLP LK L K +F +CI+ GCDY ++G G K+
Sbjct: 193 RNLNAAEN------KKLPIVEYNLKEILKELKINHNQFIDVCIMLGCDYVKPLRGFGPKR 246
Query: 180 AKDYVFSIMDPDFENALRK 198
A Y + D E L K
Sbjct: 247 A--YEMILKHKDIETILEK 263
>gi|389582194|dbj|GAB64749.1| flap exonuclease [Plasmodium cynomolgi strain B]
Length = 624
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ + AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGNCCFMDREKLPS----------------ALKMPLAKFTDAKFRYMCILSGC 166
+I L+ + + ++ K S L + + +F D CIL GC
Sbjct: 192 LIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFID-----FCILCGC 246
Query: 167 DYWTGIKGMGLKKAKDYV 184
DY IKG+G K A + +
Sbjct: 247 DYCDTIKGIGSKTAYNLI 264
>gi|159475218|ref|XP_001695720.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
gi|317374883|sp|A8J2Z9.1|FEN1_CHLRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158275731|gb|EDP01507.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
Length = 396
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
+L IK + VFDG+ K+ D+ +R +A A E L++ EA + +
Sbjct: 75 MLEAGIKPVYVFDGKPPQLKQ----DQLAQRTERRADANE--ALEKAKEAGDQEAIEKYS 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SV VT + + R GV + AP EA+AQ A + +G + TED D L FGA
Sbjct: 129 KRSVRVTREHNDECKRLLRLMGVPVVEAPTEAEAQCAEMAKSGLVYGLATEDMDALTFGA 188
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++I L PS+ +P+ +F TD +F +CIL GCDY
Sbjct: 189 PRVIRHL------------MAPSSQNVPVQEFDREVALRELELTDDQFIDLCILMGCDYC 236
Query: 170 TGIKGMGLKKA 180
I+G+G +A
Sbjct: 237 GTIRGIGAVRA 247
>gi|356927843|gb|AET42633.1| flap endonuclease-1 [Emiliania huxleyi virus 202]
Length = 358
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ P + E D+R +R + +EL + D E + ++SV
Sbjct: 75 LIEAGIKPVYVFDGKP-PQLKQKELDKRNERQAQAL--SELKVTDDSYEIEKQEKRSVRA 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + V + G+ + AP EA+A A AG A TED D L FG+ +I
Sbjct: 132 TREQSEEVKKLLTFMGIPVVQAPCEAEATCAAYVKAGKAYATATEDMDSLTFGSTHVIRH 191
Query: 127 LDLSGNCCFMDREKLPSA-LKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ + D++K P+ +P T +F +CILSGCDY IKG+G +A
Sbjct: 192 INST------DQKKQPTVEYSLPNILNDMGITMDQFIEICILSGCDYTKTIKGIGPTRA 244
>gi|67610024|ref|XP_667077.1| flap endonuclease 1 [Cryptosporidium hominis TU502]
gi|54658174|gb|EAL36849.1| flap endonuclease 1 [Cryptosporidium hominis]
Length = 454
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKA-AELLILDRGSEAQSHLRQSV- 64
LL IK + VFDG A ++D KRD + KA AEL + + +QSV
Sbjct: 40 LLEAGIKPVFVFDG----APPEMKKDELTKRDERREKALAELEKAQEVGDEELIKKQSVR 95
Query: 65 --DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
VT K +V + G+ CI AP EA+AQ A L G V+TED+D L FG
Sbjct: 96 TIHVTKKQVEDVKKLLGFLGMPCIDAPSEAEAQCAELCKDGLVYGVVTEDADSLTFGTPI 155
Query: 123 IIYKLDLSGNCCFMDREKLPSALK--MPLAKFT---------DAKFRYMCILSGCDYWTG 171
I +L+ S + + +K PS K M + K + +F +CILSGCDY
Sbjct: 156 QIKQLNFSESSNKIS-DKSPSKQKNGMQIIKLSLILSELDINMDQFIDLCILSGCDYCGT 214
Query: 172 IKGMGLKKA 180
I+G+G A
Sbjct: 215 IRGIGTSTA 223
>gi|221052642|ref|XP_002261044.1| flap exonuclease [Plasmodium knowlesi strain H]
gi|317376188|sp|B3L014.1|FEN1_PLAKH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194247048|emb|CAQ38232.1| flap exonuclease, putative [Plasmodium knowlesi strain H]
Length = 595
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ + AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGNCCFMDREKLPS----------------ALKMPLAKFTDAKFRYMCILSGC 166
+I L+ + + ++ K S L + + +F D CIL GC
Sbjct: 192 LIRNLNANASSTSQNKNKNSSKRGYILTEINLEQVLKGLNLNMNEFID-----FCILCGC 246
Query: 167 DYWTGIKGMGLKKAKDYV 184
DY IKG+G K A + +
Sbjct: 247 DYCDTIKGIGSKTAYNLI 264
>gi|348670592|gb|EGZ10413.1| hypothetical protein PHYSODRAFT_355246 [Phytophthora sojae]
Length = 165
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 60/106 (56%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I LL + + +VFDG LP K+ TEE+RRK R ++ + R SEA+
Sbjct: 60 MDRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKARQKNRELGVQHYNNKRFSEARKCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYAD 106
++ DV+ MA VIQ +A V +VAP+ ADAQ+AYL G AD
Sbjct: 120 IRAADVSPYMAHRVIQHLKAHNVQYVVAPYGADAQLAYLVKNGLAD 165
>gi|150399374|ref|YP_001323141.1| flap endonuclease-1 [Methanococcus vannielii SB]
gi|150012077|gb|ABR54529.1| XPG I [Methanococcus vannielii SB]
Length = 324
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML ++I I VFDG+ KE T+EDRRK R + E D Q + +
Sbjct: 64 KTIYML-ENEITPIWVFDGKSHDLKEKTKEDRRKLRQNALENYLEAKEQDNLENMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ + K N + GV I AP E +AQ A L + A +V+++D D +++GA+
Sbjct: 123 RANFLDKKTIENSKRLLELMGVPYINAPSEGEAQCAELVKSKNASFVVSQDYDSILYGAE 182
Query: 122 KIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
++ + S ++ K+ + L + L + D + IL G DY GIKG+G KK
Sbjct: 183 SVVKNITSSNKSLELIELSKVLTELNVNLLELID-----VAILIGTDYNPGGIKGIGPKK 237
Query: 180 AKDYV 184
A + V
Sbjct: 238 AFEVV 242
>gi|195382111|ref|XP_002049775.1| GJ21778 [Drosophila virilis]
gi|317374896|sp|B4LM90.1|FEN1_DROVI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194144572|gb|EDW60968.1| GJ21778 [Drosophila virilis]
Length = 386
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA + G EA+ R+
Sbjct: 74 LLDNGIKPVYVFDGQPPDLKSGELAKRAERREEAEKALKAA----TEAGDEAEIDKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + + + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSCK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F T +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKINV 201
IKG+G K+A + + S D E L I+
Sbjct: 238 IKGVGPKRAIELIKSYR--DIETILENIDT 265
>gi|146171182|ref|XP_001470841.1| flap endonuclease-1 [Tetrahymena thermophila]
gi|317376196|sp|A4VDN2.1|FEN1_TETTS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146145019|gb|EDK31639.1| flap endonuclease-1 [Tetrahymena thermophila SB210]
Length = 384
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
ML+ + +K + VFDG+ K R+K +D K + EA ++++
Sbjct: 77 MLIENGLKPVWVFDGKPPQFKSGELARRQKAKDEAAEKQKTAIETGDMQEALKQEQRNLH 136
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T +M + I+ + GV I+AP EA+AQ A L A +TED D L F ++
Sbjct: 137 ITKEMKADAIKLLQLVGVPVILAPCEAEAQCAALAKAKKVFATVTEDMDALTFATPFLLR 196
Query: 126 KLDLSGN-CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L+ ++ EK+ LK+ +F D +CIL GCDY I+G+G
Sbjct: 197 NLNSKKEPITEINYEKMLQELKLSHNEFVD-----LCILCGCDYLGRIEGVG 243
>gi|126653087|ref|XP_001388383.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
gi|317374887|sp|A3FPN7.1|FEN1_CRYPI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126117476|gb|EAZ51576.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
Length = 490
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKA-AELLILDRGSEAQSHLRQSV- 64
LL IK + VFDG A ++D KRD + KA AEL + + +QSV
Sbjct: 76 LLEAGIKPVFVFDG----APPEMKKDELTKRDERREKALAELEKAQEIGDEELIKKQSVR 131
Query: 65 --DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
VT K +V + G+ CI AP EA+AQ A L G V+TED+D L FG
Sbjct: 132 TIHVTKKQVEDVKKLLGFLGMPCIDAPSEAEAQCAELCKDGLVYGVVTEDADSLTFGTPI 191
Query: 123 IIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDA---------KFRYMCILSGCDYWTG 171
I +L+ S + + +K PS K M + K + +F +CILSGCDY
Sbjct: 192 QIKQLNFSESSNKI-TDKSPSKQKNGMQIIKLSLILSELDINMDQFIDLCILSGCDYCGT 250
Query: 172 IKGMGLKKA 180
I+G+G A
Sbjct: 251 IRGIGTSTA 259
>gi|332376861|gb|AEE63570.1| unknown [Dendroctonus ponderosae]
Length = 380
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL------ 60
LL H IK + VFDG+ P + E ++R ++ + KA LD+ EA
Sbjct: 74 LLEHGIKPVYVFDGKP-PEMKGGELNKRMEKRAEAQKA-----LDKAMEAGDQAEVDKFN 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT A + R GV I AP EA+AQ A + AG TED D L FG+
Sbjct: 128 RRLVKVTRHHADEAKELLRLMGVPYIEAPCEAEAQCAAMVKAGKIYATATEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA---LKMPLAK--FTDAKFRYMCILSGCDYWTGIKGM 175
++ L F + K+P LK+ L + + +F CIL GCDY I+G+
Sbjct: 188 DIVLRHL------TFSEARKMPIQEIHLKIVLQELNLSQTEFIDFCILMGCDYTDSIRGI 241
Query: 176 GLKKAKDYV 184
G KK+ + +
Sbjct: 242 GPKKSIELI 250
>gi|88603762|ref|YP_503940.1| flap endonuclease-1 [Methanospirillum hungatei JF-1]
gi|121721338|sp|Q2FNC9.1|FEN_METHJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|88189224|gb|ABD42221.1| flap endonuclease 1 [Methanospirillum hungatei JF-1]
Length = 333
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 27/235 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L I+ + +FDG+ K T ++RR R+ K K + + A + S +
Sbjct: 69 FLTQGIRPVFIFDGKSPEMKGRTIQERRDVREESKEKWDQAKKEGDLAGAFRYAMSSTAI 128
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + Q + G+ + AP E +AQ AY+ + G ADYV+++D D L+FG ++
Sbjct: 129 DAYILSSARQLIQLMGLPVVDAPSEGEAQGAYMVLKGDADYVVSQDYDTLLFGTPVLVRN 188
Query: 127 LDLSGNCCFMDREKLPSALKMPLA------KFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +SG R+ ++ L+ T + + IL+G D+ GI+G+G K
Sbjct: 189 LTISGKRRLHGRQITVQPERIVLSDVLSTLDITREQLIEIAILTGTDFNPGIRGIGAK-- 246
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSF--HNTNLMFLYQPVYD 233
L+KI K G + I +E L F FL PV D
Sbjct: 247 -------------TGLKKI----KSGEFDSIIREKLPDFDPEPVRSFFLNPPVTD 284
>gi|167536429|ref|XP_001749886.1| hypothetical protein [Monosiga brevicollis MX1]
gi|317374912|sp|A9VB27.1|FEN1_MONBE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|163771601|gb|EDQ85265.1| predicted protein [Monosiga brevicollis MX1]
Length = 368
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ H IK + VFDG+ K R +R +A E + + R+ V V
Sbjct: 74 MVNHGIKPLYVFDGKPPTMKSGELLKRGARRKEAQANLEEATEQGDTEQMEKFSRRLVHV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + Q G+ I+AP EA+AQ A L G TED D L FG ++
Sbjct: 134 TREHNEQCRQLLTLMGIPFIIAPTEAEAQCAELVKGGKVFATATEDMDALTFGTTVLLRH 193
Query: 127 LDLSGNCCFMDREKLP--------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ F + K+P L+M + +F D MCIL GCDY IKG+G +
Sbjct: 194 M------TFSEARKMPIQEFRLQKGGLEMSMEEFID-----MCILLGCDYCDSIKGIGRQ 242
Query: 179 KA 180
KA
Sbjct: 243 KA 244
>gi|347482295|gb|AEO98236.1| flap endonuclease-1 [Emiliania huxleyi virus 203]
gi|347601360|gb|AEP15846.1| flap structure-specific endonuclease 1 [Emiliania huxleyi virus
207]
gi|357972633|gb|AET97906.1| flap endonuclease-1 [Emiliania huxleyi virus 201]
Length = 358
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ P + E D+R +R + +EL + D +E + ++SV
Sbjct: 75 LIEAGIKPVYVFDGKP-PVLKKKELDKRNERQAQAL--SELKLTDDATEVEKQEKRSVRA 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + V + G+ I AP EA+A A G A TED D L FG+ +I
Sbjct: 132 TREHSEEVKKMLTLMGIPVIQAPCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
Query: 127 LDLSGNCCFMDREKLPSA-LKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ + D++K P+ +P T +F +CILSGCDY IKG+G +A
Sbjct: 192 INST------DQKKQPTVEYSLPNILNDMGITMDQFIEICILSGCDYTKTIKGIGPTRA 244
>gi|307111520|gb|EFN59754.1| hypothetical protein CHLNCDRAFT_13604, partial [Chlorella
variabilis]
Length = 150
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 3 YIHMLLAHKIKV---IMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH 59
++ L H++ V + G A+E +R + + L + R EAQ
Sbjct: 18 HVRELAGHRVGVDAWSWLHRGAVGAARELATGERPWEERGKTIRLPALDVQGREQEAQGV 77
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNI----AGYADYVITEDSDL 115
Q VDVT MA V R RGV+ +VAP+EAD Q+AYL+ G VITEDSDL
Sbjct: 78 FMQCVDVTADMAHEVAARLRERGVEFVVAPYEADPQLAYLSSIPEREGGIAAVITEDSDL 137
Query: 116 LVFGAKKIIYKLD 128
+ +G +++++K+D
Sbjct: 138 VAYGCRRVLFKMD 150
>gi|198477405|ref|XP_002136633.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
gi|317374893|sp|B5DUR8.1|FEN1_DROPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|198142925|gb|EDY71637.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
Length = 386
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A+ R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAEIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>gi|303279240|ref|XP_003058913.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460073|gb|EEH57368.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 360
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ ML A IK + VFDG+ K R+ KRD +A A+ E +
Sbjct: 70 MRTCRMLEAG-IKPVYVFDGKPPTMKGGELAKRKDKRDEAEAALAKAKEAGDQEEIEKMS 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V VT + + V+Q R G+ AP EA+A A L AG +ED D L F
Sbjct: 129 KRTVRVTRQQSQEVMQLARLMGLPVFEAPCEAEASCAALCKAGLVYAAASEDMDTLCFAC 188
Query: 121 KKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
K+ L D EK+ + L M +F D +CIL GCDY IKG+G
Sbjct: 189 PKLARNLMSPASQGKPILEFDYEKILTELDMTWEQFID-----VCILCGCDYCDSIKGVG 243
Query: 177 LKKA 180
KA
Sbjct: 244 PVKA 247
>gi|195584050|ref|XP_002081828.1| GD25512 [Drosophila simulans]
gi|317374895|sp|B4QIG6.1|FEN1_DROSI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194193837|gb|EDX07413.1| GD25512 [Drosophila simulans]
Length = 385
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINTYRD 255
>gi|45198756|ref|NP_985785.1| AFR238Wp [Ashbya gossypii ATCC 10895]
gi|44984766|gb|AAS53609.1| AFR238Wp [Ashbya gossypii ATCC 10895]
gi|374109016|gb|AEY97922.1| FAFR238Wp [Ashbya gossypii FDAG1]
Length = 698
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 38/195 (19%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L++ + ++VFDG P + + KKR + + A R + L VD+
Sbjct: 83 LISLDLDFVLVFDGDEKPIYK---QHYWKKRGTGQQTEARYSPRGRSPQLPHQLHSVVDL 139
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ CRA VD I A E +A+ A L +AG DY++T DSD +FGA +I+
Sbjct: 140 AGGI-------CRAFNVDYITAAGEGEAECAALQVAGSVDYILTNDSDAAIFGASRILRN 192
Query: 127 LDLSGNCCFMDREKLPSALKMPLAK---------------------FTDAKFRYMCILSG 165
+ LPS+ P+ K F+ F IL+G
Sbjct: 193 FSKHA-------QDLPSSGVSPVKKHVSEYFVTVVDIRAATEEHPTFSRKAFALFAILTG 245
Query: 166 CDYWTGIKGMGLKKA 180
DY TG++ +G K+A
Sbjct: 246 ADYGTGLQHLGYKRA 260
>gi|195335051|ref|XP_002034189.1| GM20026 [Drosophila sechellia]
gi|317374894|sp|B4HTA1.1|FEN1_DROSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194126159|gb|EDW48202.1| GM20026 [Drosophila sechellia]
Length = 385
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINTYRD 255
>gi|195488056|ref|XP_002092153.1| GE14031 [Drosophila yakuba]
gi|317374898|sp|B4P5U9.1|FEN1_DROYA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194178254|gb|EDW91865.1| GE14031 [Drosophila yakuba]
Length = 387
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 91/198 (45%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHANEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ K F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYEKLLEGLSINSREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>gi|195155221|ref|XP_002018504.1| GL16728 [Drosophila persimilis]
gi|317374892|sp|B4GIM3.1|FEN1_DROPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194114300|gb|EDW36343.1| GL16728 [Drosophila persimilis]
Length = 386
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A+ R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAEIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>gi|17647423|ref|NP_523765.1| flap endonuclease 1 [Drosophila melanogaster]
gi|122102839|sp|Q7K7A9.1|FEN1_DROME RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3929699|emb|CAA21320.1| EG:EG0003.3 [Drosophila melanogaster]
gi|7302871|gb|AAF57944.1| flap endonuclease 1 [Drosophila melanogaster]
gi|261260009|gb|ACX54939.1| MIP14376p [Drosophila melanogaster]
Length = 385
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINTYRD 255
>gi|332157650|ref|YP_004422929.1| flap endonuclease-1 [Pyrococcus sp. NA2]
gi|331033113|gb|AEC50925.1| flap endonuclease-1 [Pyrococcus sp. NA2]
Length = 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K+ E RR+ R+ + K E L EA+ + +++ V
Sbjct: 68 LMEAGIKPVYVFDGKPPEFKKKELEKRREAREEAEVKWREALARGDIEEARKYAQRATKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + Q + G+ + AP E +AQ AY+ + G ++D D L+FGA +++
Sbjct: 128 NEMLIEDAKQLLQLMGIPIVQAPSEGEAQAAYMAMKGDVYASASQDYDSLLFGAPRLVRN 187
Query: 127 LDLSGNCCFMDREKLPSA-----LKMPLA---------KFTDAKFRYMCILSGCDYW-TG 171
L ++G + K+P +K L K T K + IL G DY G
Sbjct: 188 LTITG------KRKMPGKDVYVEVKPELIILEDVLNQLKITREKLIELAILVGTDYNPGG 241
Query: 172 IKGMGLKKAKDYVFSIMDP 190
IKG+G KKA + V DP
Sbjct: 242 IKGIGPKKALEIVKYSKDP 260
>gi|448414274|ref|ZP_21577413.1| flap endonuclease-1 [Halosarcina pallida JCM 14848]
gi|445682567|gb|ELZ34984.1| flap endonuclease-1 [Halosarcina pallida JCM 14848]
Length = 326
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS-------EAQSH-LR 61
H + + VFDG K+A +RR +R+ KA+ + +RG EA++ L
Sbjct: 73 HDLTPVFVFDGGVTELKDAEVSERRAQRE--KAEELKREAEERGDALAASRLEARTQRLT 130
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+++ T + L ++ V + AP E +AQ +++ G ADYV +ED D L+FGA
Sbjct: 131 ETIQTTSRELLELLD------VPVVEAPAEGEAQASHMAKRGDADYVGSEDYDTLLFGAP 184
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
+ +L G+ MD E S+L++ + D + +L G D+ G+ G+G K
Sbjct: 185 YTLRQLTSKGDPELMDLEATLSSLEVTHEQLID-----IAVLCGTDFNDGVSGVGPK--- 236
Query: 182 DYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
AL+++ G + + + ++ + +FL PV D
Sbjct: 237 ------------TALKEVKARGDLWAVLDARDAYIDNADRVRELFLDPPVTD 276
>gi|387592620|gb|EIJ87644.1| flap endonuclease 1-B [Nematocida parisii ERTm3]
Length = 371
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL I + +FDG+ KE T +RR +++ + E + + E H +++V
Sbjct: 74 LLEKGIIPVYIFDGQPPELKENTLTERRIRKEQAEKDLVEAVTEE---EKVKHAKRTVRA 130
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ + AP EA+ A LNI G + V++ED D L FG K ++
Sbjct: 131 TKYHVESAQHLLKVMGIPYMTAPNEAEGFCAALNICGAVNGVVSEDMDSLAFGGKILLRN 190
Query: 127 LDLSGNCCFMDREKLPS---ALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
+ + ++KL +L+M L + ++F MCIL GCDY +KGMG KK
Sbjct: 191 FFPA-----LMKKKLSVMEISLEMVLKQTGLDQSEFIDMCILLGCDYCQKLKGMGPKKVY 245
Query: 182 DYV 184
D V
Sbjct: 246 DLV 248
>gi|45358876|ref|NP_988433.1| flap endonuclease-1 [Methanococcus maripaludis S2]
gi|45047742|emb|CAF30869.1| flap endonuclease [Methanococcus maripaludis S2]
Length = 324
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML + + I VFDG+ KE T+E+RRK R+ E + E Q + +
Sbjct: 64 KTIYML-ENGMTPIWVFDGKSHELKEKTKEERRKSREGALDSYMEAKEQNNLEEMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ + K N + G+ + AP E +AQ A L A A VI++D D +++GA+
Sbjct: 123 RANFLDKKTVDNSKKLLELMGIPYVNAPSEGEAQCAELVKANNAFCVISQDYDSILYGAE 182
Query: 122 KIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
++ + S + ++ EK S L + + DA IL G DY G+KG G KK
Sbjct: 183 NVVKNITSSNKDIELIELEKTLSGLNISRDQLIDA-----AILIGTDYNPGGLKGFGPKK 237
Query: 180 AKDYVFSIMDPDFENALRKINVYGKI 205
A D ++ EN + +I Y +I
Sbjct: 238 AID---TVKKGKMENYISEIENYSEI 260
>gi|387595247|gb|EIJ92872.1| flap endonuclease 1-B [Nematocida parisii ERTm1]
Length = 342
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL I + +FDG+ KE T +RR +++ + E + + E H +++V
Sbjct: 74 LLEKGIIPVYIFDGQPPELKENTLTERRIRKEQAEKDLVEAVTEE---EKVKHAKRTVRA 130
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ + AP EA+ A LNI G + V++ED D L FG K ++
Sbjct: 131 TKYHVESAQHLLKVMGIPYMTAPNEAEGFCAALNICGAVNGVVSEDMDSLAFGGKILLRN 190
Query: 127 LDLSGNCCFMDREKLPS---ALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
+ + ++KL +L+M L + ++F MCIL GCDY +KGMG KK
Sbjct: 191 FFPA-----LMKKKLSVMEISLEMVLKQTGLDQSEFIDMCILLGCDYCQKLKGMGPKKVY 245
Query: 182 DYV 184
D V
Sbjct: 246 DLV 248
>gi|194882401|ref|XP_001975300.1| GG22240 [Drosophila erecta]
gi|317374889|sp|B3NP61.1|FEN1_DROER RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190658487|gb|EDV55700.1| GG22240 [Drosophila erecta]
Length = 387
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 91/198 (45%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLSINSREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>gi|449435964|ref|XP_004135764.1| PREDICTED: flap endonuclease 1-like [Cucumis sativus]
Length = 377
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR A+ + + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGNKDDIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV I AP EA+AQ A L G V +ED D L FG+ + +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASEDMDSLTFGSPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNIRGI 242
Query: 176 G 176
G
Sbjct: 243 G 243
>gi|410909029|ref|XP_003967993.1| PREDICTED: flap endonuclease 1-like [Takifugu rubripes]
Length = 380
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL----RQ 62
+L H IK + VFDG+ K + E R +KR A+A +LL + + Q ++ ++
Sbjct: 74 MLEHGIKPVYVFDGKPPQLKSSELEKRGEKR----AEAEKLLAQAQETGEQENIEKFSKR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + + GV I AP EA+A A L AG TED D L FG
Sbjct: 130 LVKVTKQHSDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLTFGTNV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A K+P+ +F T+ +F +CIL GCDY
Sbjct: 190 LLRHLTAS------------EAKKLPIQEFHFSRVLQETGLTNEQFIDLCILLGCDYCGT 237
Query: 172 IKGMGLKKAKDYV 184
IKG+G K+A D +
Sbjct: 238 IKGIGPKRAIDLI 250
>gi|73852488|ref|YP_293772.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|72415204|emb|CAI65441.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|347481843|gb|AEO97829.1| flap endonuclease-1 [Emiliania huxleyi virus 84]
gi|347600467|gb|AEP14954.1| endonuclease [Emiliania huxleyi virus 88]
Length = 358
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ P + E D+R +R + +EL + D +E + ++SV
Sbjct: 75 LIEAGIKPVYVFDGKP-PVLKKKELDKRNERQAQAL--SELKLTDDATEVEKQEKRSVRA 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + V + G+ + AP EA+A A G A TED D L FG+ +I
Sbjct: 132 TREHSEEVKKMLTLMGIPVVQAPCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
Query: 127 LDLSGNCCFMDREKLPSA-LKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ + D++K P+ +P T +F +CILSGCDY IKG+G +A
Sbjct: 192 INST------DQKKQPTVEYSLPNILNDMGITMDQFIEICILSGCDYTKTIKGIGPTRA 244
>gi|68074223|ref|XP_679026.1| flap exonuclease [Plasmodium berghei strain ANKA]
gi|74991237|sp|Q4Z015.1|FEN1_PLABA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56499663|emb|CAH96377.1| flap exonuclease, putative [Plasmodium berghei]
Length = 478
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS--- 63
L+ + +K I VFDG K + E R +KR KA ELLI + + +QS
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLIKAKEENLEEIKKQSGRT 131
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V VT K + G+ I +P EA+AQ A+L A TED+D LVFG K +
Sbjct: 132 VRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKIL 191
Query: 124 IYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDY 168
I L+ + + ++ E++ LK+ + +F D CIL GCDY
Sbjct: 192 IRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFID-----FCILCGCDY 246
Query: 169 WTGIKGMGLKKAKDYV 184
IKG+G K A + +
Sbjct: 247 CDTIKGIGSKTAYNLI 262
>gi|448321569|ref|ZP_21511045.1| flap endonuclease-1 [Natronococcus amylolyticus DSM 10524]
gi|445603121|gb|ELY57089.1| flap endonuclease-1 [Natronococcus amylolyticus DSM 10524]
Length = 325
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ I H + +MVFDG KE E RR++R +++ E L R Q +
Sbjct: 63 VQGISRFFEHDVTPVMVFDGGPSQLKEDEIESRREQRRTYE----EQLETAREEGDQVAI 118
Query: 61 RQSVDVTHKMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q T ++ + + R V + AP E +AQ A++ G ADYV +ED D L
Sbjct: 119 AQLESRTQRLTPTIQETSRELLELLDVPVVEAPAEGEAQAAHVVKRGDADYVGSEDYDAL 178
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+FGA + +L G+ MD E + L + DA IL G D+ G+ G+G
Sbjct: 179 LFGAPLTLRQLTSKGDPELMDLEATLERHDLTLEQLIDA-----AILIGTDFNEGVSGIG 233
Query: 177 LKKA 180
K A
Sbjct: 234 PKTA 237
>gi|91085979|ref|XP_971921.1| PREDICTED: similar to flap endonuclease-1 [Tribolium castaneum]
gi|270009935|gb|EFA06383.1| hypothetical protein TcasGA2_TC009261 [Tribolium castaneum]
Length = 381
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ + IK + VFDG+ K A R+++RD + + L +E R+ V V
Sbjct: 74 LIENGIKPVYVFDGKPPELKSAELSKRQERRDEAQKALDKATELGDATEVDKFNRRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T A Q GV I AP EA+AQ A + G TED D L FG+ ++
Sbjct: 134 TRHHADEAKQLLTLMGVPYIEAPCEAEAQCAAMVKGGLVYATATEDMDALTFGSNVLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDA------KFRYMCILSGCDYWTGIKGMGLKKA 180
L F + K+P ++ L+K + F +CIL GCDY I+G+G K+A
Sbjct: 194 L------TFSEARKMP-VQEIHLSKVLEGLELDQKAFVDLCILLGCDYTESIRGIGPKRA 246
Query: 181 KDYV 184
+ +
Sbjct: 247 IELI 250
>gi|134045325|ref|YP_001096811.1| flap endonuclease-1 [Methanococcus maripaludis C5]
gi|132662950|gb|ABO34596.1| flap endonuclease 1 [Methanococcus maripaludis C5]
Length = 324
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML +++ I VFDG+ KE T+E+RRK R+ E + E Q + +
Sbjct: 64 KTIYML-ENEMTPIWVFDGKSHDLKEKTKEERRKSRNGALDSYLEAKEQNNLEEMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ + K N + G+ I AP E +AQ A L + A VI++D D +++GA+
Sbjct: 123 RANFLDKKTIDNSKKLLELMGIPYINAPSEGEAQCAELVKSNDAFCVISQDYDSILYGAE 182
Query: 122 KIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
++ + S + ++ EK S L + L + D + IL G DY G+KG G KK
Sbjct: 183 NVVKNITSSNKDIELIELEKTLSELNVSLDQLID-----VAILIGTDYNPGGLKGFGPKK 237
Query: 180 AKDYVFSIMDPDFENALRKINVYGKI 205
A D ++ EN + +I Y +I
Sbjct: 238 AID---TVKKGKMENYISEIENYSEI 260
>gi|37719664|gb|AAR01941.1| flap endonuclease 1 [Plasmodium falciparum]
Length = 648
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + ++ E++ L + + +F D CIL GCD
Sbjct: 192 LIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>gi|448305063|ref|ZP_21494997.1| flap endonuclease-1 [Natronorubrum sulfidifaciens JCM 14089]
gi|445589598|gb|ELY43826.1| flap endonuclease-1 [Natronorubrum sulfidifaciens JCM 14089]
Length = 325
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSH-------KAKAAELLILDRGSEAQSHLRQ 62
H I +MVFDG K E RR++R+++ + + E+ I S Q L
Sbjct: 72 HDITPVMVFDGGPSELKADEIESRREQRETYEDQLEVAREEGDEVAIAQLESRTQ-RLTP 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
++ T + L ++ V + AP E +AQ A++ G ADYV +ED D L+FGA
Sbjct: 131 TIQETSRELLRLLD------VPIVEAPAEGEAQAAHMARRGDADYVGSEDYDALLFGAPL 184
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L GN MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 185 TLRQLTSKGNPELMDLEATLEHHDLTLEQLIDA-----AILIGTDFNNGVHGIGPKTA 237
>gi|449510827|ref|XP_004163772.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Cucumis
sativus]
Length = 382
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K R KR A+ + + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKXQELAKRYSKRADATEDLADAIEVGNKDDIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV I AP EA+AQ A L G V +ED D L FG+ + +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASEDMDSLTFGSPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNIRGI 242
Query: 176 G 176
G
Sbjct: 243 G 243
>gi|390600384|gb|EIN09779.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 1103
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
Query: 46 ELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYA 105
E+ +L++ + ++ +R S ++TH+M ++ R G+ I AP EA+AQ A LN G
Sbjct: 705 EIRVLNQ--QRKAAMRDSEEITHQMVAQIMTMLRLFGIPYITAPMEAEAQCATLNELGLV 762
Query: 106 DYVITEDSDLLVFGAKKIIYKLDLSGNC--CFMDREKLPS-ALKMPLAKFTDAKFRYMCI 162
D +IT+DSD+ +FG K+++ + CF+ LP A ++ L + T + Y+
Sbjct: 763 DGIITDDSDVFLFGGKRVLKNMFNQSKTVECFL----LPDLARELGLDRDTLIRLAYLL- 817
Query: 163 LSGCDYWTGIKGMG 176
G DY G+ G+G
Sbjct: 818 --GSDYTEGLPGVG 829
>gi|42570539|ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
gi|332006193|gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 453
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K R KR A + + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + A EA+AQ A L +G V +ED D L FGA K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|74824687|sp|Q9GZ01.1|FEN1_PLAFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|9885425|gb|AAG01445.1| flap endonuclease-1 [Plasmodium falciparum]
Length = 650
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + ++ E++ L + + +F D CIL GCD
Sbjct: 192 LIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>gi|317374910|sp|B4FHY0.1|FEN1_MAIZE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194695278|gb|ACF81723.1| unknown [Zea mays]
Length = 379
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KRD E + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGDKDAIEKLSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 135 TRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASEDMDSLTFGAPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CIL GCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|159905743|ref|YP_001549405.1| flap endonuclease-1 [Methanococcus maripaludis C6]
gi|159887236|gb|ABX02173.1| XPG I domain protein [Methanococcus maripaludis C6]
Length = 324
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML +++ I VFDG+ KE T+E+RRK R+ E + E Q + +
Sbjct: 64 KTIYML-ENEMTPIWVFDGKSHDLKEKTKEERRKSRNGALDSYLEAKEQNNLEEMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ + K+ N + G+ I AP E +AQ A L A A VI++D D +++GA+
Sbjct: 123 RANFLDKKIIDNSKKLLELMGIPYIDAPSEGEAQCAELVKANDAFCVISQDYDSILYGAE 182
Query: 122 KIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
++ + S + ++ EK S L + L + D + IL G DY G+KG G KK
Sbjct: 183 NVVKNITSSNKDIELIELEKTLSELNVSLDQLID-----VAILIGTDYNPGGLKGFGPKK 237
Query: 180 AKDYV 184
A D V
Sbjct: 238 AIDTV 242
>gi|83286314|ref|XP_730108.1| Flap endonuclease-1 [Plasmodium yoelii yoelii 17XNL]
gi|74882336|sp|Q7RME3.1|FEN1_PLAYO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|23489735|gb|EAA21673.1| flap endonuclease-1-related [Plasmodium yoelii yoelii]
Length = 480
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS----EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELLI + E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLIKAKAEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I +P EA+AQ A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + + ++ E++ LK+ + +F D CIL GCD
Sbjct: 192 LIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>gi|324514356|gb|ADY45841.1| Flap endonuclease 1-B [Ascaris suum]
Length = 320
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K E R ++R + + AE + R+ V V
Sbjct: 10 MITNGIKPVYVFDGKPPEMKCEELEKRTERRVEAEKQLAEAKEKGDAMAVEKFERRLVKV 69
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + R GV AP EA+AQ A L AG TED D L FG+K+++ +
Sbjct: 70 TKDQNEEAKKLLRLMGVPVFDAPCEAEAQCAELVRAGKVFAAATEDMDALAFGSKRLLRQ 129
Query: 127 LDLSGNCCF----MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S ++ E++ +M + +F D +CIL GCDY I+G+G KKA
Sbjct: 130 LTASEAKKLPVKEINLEQVLKDFEMDMPQFVD-----LCILLGCDYTKTIRGIGPKKA 182
>gi|298706804|emb|CBJ29727.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 476
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKA-AELLIL---DRGSEAQSHL 60
+L+ +K +FDG+ L E KR + +AKA AEL + D ++
Sbjct: 78 MLSKGVKPCYIFDGKPPQLKGGELA------KRTAKRAKAEAELKVATEADDKNDVDKFS 131
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ V VT + + GV + AP EA+AQ A L G TED D L F
Sbjct: 132 KRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQT 191
Query: 121 KKIIYKLDLSGN---CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
K++ ++ SG+ +D +KL L++ KF D +C+L GCDY IKG+G
Sbjct: 192 PKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVD-----LCVLCGCDYTGSIKGIGP 246
Query: 178 KKA 180
KKA
Sbjct: 247 KKA 249
>gi|115465159|ref|NP_001056179.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|62510701|sp|Q9SXQ6.1|FEN11_ORYSJ RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A; AltName:
Full=OsFEN-1a
gi|4587225|dbj|BAA36171.1| FEN-1 [Oryza sativa Japonica Group]
gi|113579730|dbj|BAF18093.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|222632398|gb|EEE64530.1| hypothetical protein OsJ_19381 [Oryza sativa Japonica Group]
Length = 380
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR+ + E + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 135 TKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|317374863|sp|B8AW67.1|FEN11_ORYSI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|218197185|gb|EEC79612.1| hypothetical protein OsI_20807 [Oryza sativa Indica Group]
Length = 380
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR+ + E + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 135 TKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|448299433|ref|ZP_21489445.1| flap endonuclease-1 [Natronorubrum tibetense GA33]
gi|445588023|gb|ELY42272.1| flap endonuclease-1 [Natronorubrum tibetense GA33]
Length = 325
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K+ E RR++R S++ E L R Q + Q T +
Sbjct: 72 HDIVPVMVFDGGPSELKDDEIESRREQRRSYE----EQLETAREEGDQVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FG+ + +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVKRGDADYVGSEDYDALLFGSPRTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E ++ L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLDHHELTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|347601761|gb|AEP16246.1| flap endonuclease 1 [Emiliania huxleyi virus 208]
Length = 358
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ P + E D+R +R + +EL + D +E + ++SV
Sbjct: 75 LIEAGIKPVYVFDGKP-PVLKKKELDKRNERQAQAL--SELKLTDDATEVEKQEKRSVRA 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + V + G+ + +P EA+A A G A TED D L FG+ +I
Sbjct: 132 TREHSEEVKKMLTLMGIPVVQSPCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
Query: 127 LDLSGNCCFMDREKLPSA-LKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ + D++K P+ +P T +F +CILSGCDY IKG+G +A
Sbjct: 192 INST------DQKKQPTVEYSLPNILNDMGITMDQFIEICILSGCDYTKTIKGIGPTRA 244
>gi|124505315|ref|XP_001351399.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
gi|74876406|sp|Q7K734.1|FEN1_PLAF7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|11559508|gb|AAG37989.1|AF093702_1 flap endonuclease 1 [Plasmodium falciparum]
gi|6562723|emb|CAB62862.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
Length = 672
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + ++ E++ L + + +F D CIL GCD
Sbjct: 192 LIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKA 180
Y IKG+G K A
Sbjct: 247 YCDTIKGIGSKTA 259
>gi|66811596|ref|XP_639977.1| hypothetical protein DDB_G0284987 [Dictyostelium discoideum AX4]
gi|74854014|sp|Q54NU0.1|FEN1_DICDI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|60466913|gb|EAL64957.1| hypothetical protein DDB_G0284987 [Dictyostelium discoideum AX4]
Length = 384
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L++ IK I VFDG K R+ +R K E + E Q ++ + V
Sbjct: 75 LISRGIKPIYVFDGSAPVLKSGELAKRQARRKEAKENLKEATEVGTNEEVQKFAKRVITV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K + I+ GV + AP EA+AQ A + G A +ED D L G+ ++ +
Sbjct: 135 TRKQNEDCIKLLTLMGVPIVKAPCEAEAQCAEIVKKGKAWATGSEDMDSLTLGSTVLLRR 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A KMP+ +F T +F + IL GCDY IKG+
Sbjct: 195 LFFS------------EAKKMPILEFELQSVLEGLGLTQDEFIDLSILLGCDYCDSIKGI 242
Query: 176 GLKKAKDYV 184
G K+A + +
Sbjct: 243 GPKRAIELI 251
>gi|195629924|gb|ACG36603.1| flap endonuclease 1a [Zea mays]
Length = 379
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KRD E + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGDKDAIEKLSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 135 TRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASEDMDSLTFGAPRXLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CIL GCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|297812863|ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
gi|297320152|gb|EFH50574.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K R KR A + + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + A EA+AQ A L +G V +ED D L FGA K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|340624624|ref|YP_004743077.1| flap endonuclease-1 [Methanococcus maripaludis X1]
gi|339904892|gb|AEK20334.1| flap endonuclease-1 [Methanococcus maripaludis X1]
Length = 324
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML + + I VFDG+ KE T+E+RRK R+ E + E Q + +
Sbjct: 64 KTIYML-ENGMTPIWVFDGKSHELKEKTKEERRKSREGALDSYMEAKEQNNLEEMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ + K N + G+ + AP E +AQ A L A A VI++D D +++GA
Sbjct: 123 RANFLDRKTVDNSKKLLELMGIPYVNAPSEGEAQCAELVKANNAFCVISQDYDSILYGAD 182
Query: 122 KIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
++ + S + ++ EK S L + + DA IL G DY G+KG G KK
Sbjct: 183 YVVKNITSSNKDIELIELEKTLSGLNISCDQLIDA-----AILIGTDYNPGGLKGFGPKK 237
Query: 180 AKDYVFSIMDPDFENALRKINVYGKI 205
A D ++ EN + +I Y +I
Sbjct: 238 AID---TVKKGKMENYISEIENYSEI 260
>gi|317419778|emb|CBN81814.1| Flap endonuclease 1-B [Dicentrarchus labrax]
Length = 380
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL----RQ 62
+L H IK + VFDG+ K A E KR +A+A +LL + Q ++ ++
Sbjct: 74 MLEHGIKPVYVFDGKPPQLKSAELE----KRGERRAEAEKLLAQAQEMGEQENIDKFSKR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + + GV I AP EA+A A L AG TED D L FG
Sbjct: 130 LVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDMDGLTFGTNV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A K+P+ +F T+ +F +CIL GCDY
Sbjct: 190 LLRHLTAS------------EAKKLPIQEFHFSRMLQDIGLTNEQFIDLCILLGCDYCAT 237
Query: 172 IKGMGLKKAKDYV 184
IKG+G K+A D +
Sbjct: 238 IKGIGPKRAIDLI 250
>gi|238481386|ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana]
gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|332006194|gb|AED93577.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 383
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K R KR A + + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + A EA+AQ A L +G V +ED D L FGA K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|3047083|gb|AAC13596.1| similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana]
Length = 362
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K R KR A + + + + +++V V
Sbjct: 108 LLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKV 167
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + A EA+AQ A L +G V +ED D L FGA K +
Sbjct: 168 TKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRH 227
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 228 L--------MD----PSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 275
Query: 176 GLKKA 180
G + A
Sbjct: 276 GGQTA 280
>gi|68062082|ref|XP_673044.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490604|emb|CAI01886.1| hypothetical protein PB300433.00.0 [Plasmodium berghei]
Length = 375
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLIL--DRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELLI + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLIKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I +P EA+AQ A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + + ++ E++ LK+ + +F D CIL GCD
Sbjct: 192 LIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>gi|253744402|gb|EET00616.1| Flap structure-specific endonuclease [Giardia intestinalis ATCC
50581]
Length = 361
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDS---HKAKAAELLILDRGSEAQSHL 60
+ ++ IK I VFDG+ K+ E RR+ R++ + KA E ++R A+
Sbjct: 72 VTRMVEAGIKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGDIER---AKQLS 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R++V VT + + G+ +VA EA+AQ + AG + V + D D+L FG+
Sbjct: 129 RRTVKVTQQHCKQAEKLLDILGIPYVVAAGEAEAQCVAMAKAGLCEGVASSDLDVLAFGS 188
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLK 178
+I L G D+E + L L + F+ +F +CIL GCDY ++G+G K
Sbjct: 189 PSLIRNLAQGG-----DKEIMEINLDTVLNELGFSYDEFLDLCILCGCDYANSLEGIGPK 243
Query: 179 KA 180
A
Sbjct: 244 TA 245
>gi|341882587|gb|EGT38522.1| hypothetical protein CAEBREN_12338 [Caenorhabditis brenneri]
gi|341895701|gb|EGT51636.1| hypothetical protein CAEBREN_24192 [Caenorhabditis brenneri]
Length = 382
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K E R ++R + E EA+ R+ V V
Sbjct: 74 MIDNGIKPVYVFDGKPPDMKSGELEKRSERRAEAEKALTEAKEKGDAKEAEKFERRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + V G+ + AP EA+AQ A+L AG TED D L FG+ ++
Sbjct: 134 TKQQNEEVKHLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDMDALTFGSSVLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L P + K+P+ +F ++ +F +CIL GCDY I+G+
Sbjct: 194 L------------LAPESKKIPIKEFHLARVLEEMKLSEDEFIDLCILLGCDYCGTIRGV 241
Query: 176 GLKKAKDYV 184
G KKA + +
Sbjct: 242 GPKKAVELI 250
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 86/195 (44%), Gaps = 25/195 (12%)
Query: 17 VFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQ 76
VFDG+ K+ R +R E L E + +++V VT + + +
Sbjct: 101 VFDGKPPDLKKQELAKRFSRRADATEDLTEALETGNKEEIEKFSKRTVKVTKQHNEDCKK 160
Query: 77 ACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 136
R GV I AP EA+AQ A L +G V +ED D L FGA K + L M
Sbjct: 161 LLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGASKFLRHL--------M 212
Query: 137 DREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 185
D PS+ K+P+ +F T +F +CILSGCDY I+G+G + A +
Sbjct: 213 D----PSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIR 268
Query: 186 SIMDPDFENALRKIN 200
EN L IN
Sbjct: 269 Q--HGSIENILENIN 281
>gi|440797493|gb|ELR18579.1| XPG Iregion domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 434
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
L+A+ IK + VFDGR P + TE +R + + E +E L +++V
Sbjct: 39 LIAYGIKPVYVFDGRP-PVMKGTELKKRSAKKKEAEQGLEEATELGDTETMRKLEKRTVH 97
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT K + R G+ + AP EA+AQ A L AG +ED D L F ++
Sbjct: 98 VTPKHNEECKKLLRLMGIPVVEAPTEAEAQCAELCRAGKVFATGSEDMDSLTFATPILLR 157
Query: 126 KLDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
L+ + +D EK+ M + +F D +CIL+GCDY I+G+G K+A
Sbjct: 158 HLNYAEAQKKPIIEIDLEKVLKGFGMTMEQFID-----LCILAGCDYCDTIRGIGPKRAL 212
Query: 182 DYV 184
+ +
Sbjct: 213 EMI 215
>gi|350416440|ref|XP_003490949.1| PREDICTED: flap endonuclease 1-like [Bombus impatiens]
Length = 381
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKA--KAAELLILDRGSEAQSHLRQSV 64
L+ IK + VFDG+ K R ++RD + +AAE + + R+ V
Sbjct: 74 LVEQGIKPVYVFDGKPPNLKGGELAKRAERRDETQKLLRAAEEA--GNAEDIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + A Q + G+ I AP EA+AQ A L AG TED D L FG ++
Sbjct: 132 KVTKEHAKEAKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIK 173
+L S A KMP+ +F +F +CI+ GCDY + IK
Sbjct: 192 RRLTFS------------EARKMPVQEFHFDKVLKDLGLNHDEFIDLCIMLGCDYTSSIK 239
Query: 174 GMGLKKAKDYV 184
G+G K+A + +
Sbjct: 240 GVGPKRAIELI 250
>gi|448309987|ref|ZP_21499840.1| flap endonuclease-1 [Natronorubrum bangense JCM 10635]
gi|445589008|gb|ELY43247.1| flap endonuclease-1 [Natronorubrum bangense JCM 10635]
Length = 325
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K E RR++R+S++ + L + R + Q T +
Sbjct: 72 HDITPVMVFDGGPSDLKADEIESRREQRESYEDQ----LEVAREEGDTVAIAQLESRTQR 127
Query: 70 MALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R V + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLELLDVPIVEAPAEGEAQAAHMARRGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L GN MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGNPELMDLEATLEHHDLTLEQLIDA-----AILIGTDFNDGVHGIGPKTA 237
>gi|307352874|ref|YP_003893925.1| flap structure-specific endonuclease [Methanoplanus petrolearius
DSM 11571]
gi|307156107|gb|ADN35487.1| flap structure-specific endonuclease [Methanoplanus petrolearius
DSM 11571]
Length = 333
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I L + IK + +FDG K T E RR+++ + + + + A H R +
Sbjct: 66 ITTFLENNIKPVFIFDGAPPEFKSETLEQRRERKAVAETAYRQAVEVGDTVSAFRHARAA 125
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V + + G+ CI A E +AQ AY+ + G Y I++D D L+FGA ++
Sbjct: 126 TRVDETIIAGTKELLGYMGIPCIDAMSEGEAQAAYMAMNGDVRYSISQDYDSLLFGAPRL 185
Query: 124 IYKLDLS------GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+ L +S G ++ E++ + + T + + IL G D+ +G+KG+G
Sbjct: 186 VRNLTVSRKRKVRGRVITVNPEEILLSDLLDGKGITREELIEIGILVGTDFNSGVKGVGA 245
Query: 178 KKA 180
K A
Sbjct: 246 KTA 248
>gi|413946273|gb|AFW78922.1| flap endonuclease 1a [Zea mays]
Length = 523
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KRD E + + + +++V V
Sbjct: 219 LLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGDKDAIEKLSKRTVKV 278
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 279 TRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASEDMDSLTFGAPRFLRH 338
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CIL GCDY IKG+
Sbjct: 339 L--------MD----PSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGCDYCDSIKGI 386
Query: 176 GLKKA 180
G + A
Sbjct: 387 GGQTA 391
>gi|221485037|gb|EEE23327.1| flap endonuclease-1, putative [Toxoplasma gondii GT1]
Length = 552
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL ++ + VFDG+ K RR+ R+S + A + E + + +SV V
Sbjct: 76 LLEQGVRPVYVFDGKPPELKSGELAKRRELRESAQEAAEKAREEGNVEELRKQIVRSVRV 135
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + +V + R G+ + AP EA+AQ A L TED+D L FGA ++I
Sbjct: 136 SKQHNEDVKRLLRLMGLPVVEAPCEAEAQCAELTKNRKVWATATEDADALTFGATRLIRN 195
Query: 127 LDLSGNCCFMDREKLPSA---LKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
L S + +P +F+ +F CIL GCDY +KG+G K
Sbjct: 196 LTFGERSSGSGASATASGILVIDLPTLLEELQFSQEQFIDFCILCGCDYCGTLKGVGAKT 255
Query: 180 A----KDY-----VFSIMDPD 191
A K++ + ++DP+
Sbjct: 256 AYSLVKEHGSIEKILEVVDPE 276
>gi|110766831|ref|XP_395769.3| PREDICTED: flap endonuclease 1 [Apis mellifera]
Length = 379
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K R +KRD + + + R+ V V
Sbjct: 74 LVEQGIKPVYVFDGKPPNLKGGELAKRAEKRDEAQKLLQAAEEAGNAEDIEKFNRRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + A Q + G+ I AP EA+AQ A + AG TED D L FG ++ +
Sbjct: 134 TKEHADEAKQLLKLMGIPYIDAPCEAEAQCAAMVKAGKVFATATEDMDALTFGCNILLRR 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L S A KMP+ +F K F +CI+ GCDY IKG+
Sbjct: 194 LTFS------------EARKMPVQEFHQDKVLEGLELSHDEFIDLCIMLGCDYTNSIKGV 241
Query: 176 GLKKAKDYV 184
G K+A + +
Sbjct: 242 GPKRAIELI 250
>gi|237836211|ref|XP_002367403.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|211965067|gb|EEB00263.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|221505908|gb|EEE31543.1| flap endonuclease-1, putative [Toxoplasma gondii VEG]
Length = 552
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL ++ + VFDG+ K RR+ R+S + A + E + + +SV V
Sbjct: 76 LLEQGVRPVYVFDGKPPELKSGELAKRRELRESAQEAAEKAREEGNVEELRKQIVRSVRV 135
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + +V + R G+ + AP EA+AQ A L TED+D L FGA ++I
Sbjct: 136 SKQHNEDVKRLLRLMGLPVVEAPCEAEAQCAELTKNRKVWATATEDADALTFGATRLIRN 195
Query: 127 LDLSGNCCFMDREKLPSA---LKMPL----AKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
L S + +P +F+ +F CIL GCDY +KG+G K
Sbjct: 196 LTFGERASGSGASATASGILVIDLPTLLEELQFSQEQFIDFCILCGCDYCGTLKGVGAKT 255
Query: 180 A----KDY-----VFSIMDPD 191
A K++ + ++DP+
Sbjct: 256 AYSLVKEHGSIEKILEVVDPE 276
>gi|70942151|ref|XP_741275.1| flap exonuclease [Plasmodium chabaudi chabaudi]
gi|74978262|sp|Q4XXP8.1|FEN1_PLACH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56519555|emb|CAH78313.1| flap exonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 479
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLIL--DRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL+ + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLLKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I +P EA+AQ A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYDMAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + + ++ E++ LK+ + +F D CIL GCD
Sbjct: 192 LIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>gi|429190737|ref|YP_007176415.1| flap structure-specific endonuclease [Natronobacterium gregoryi
SP2]
gi|448327264|ref|ZP_21516597.1| flap endonuclease-1 [Natronobacterium gregoryi SP2]
gi|429134955|gb|AFZ71966.1| flap structure-specific endonuclease [Natronobacterium gregoryi
SP2]
gi|445608848|gb|ELY62671.1| flap endonuclease-1 [Natronobacterium gregoryi SP2]
Length = 325
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKR-------DSHKAKAAELLILDRGSEAQSHLRQ 62
+ + +MVFDG KE E RR++R ++ + + EL I S Q L +
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRREQRRTYEEQLETAREEGDELAIAQLESRTQ-RLTE 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
++ T + L ++ V + AP E +AQ A++ G ADYV +ED D L+FGA
Sbjct: 131 TIQETSRELLRLLD------VPIVEAPAEGEAQAAHMVRHGDADYVGSEDYDALLFGAPL 184
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L G+ MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 185 TLRQLTSKGDLELMDLEATLEHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|255552654|ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3, putative [Ricinus communis]
Length = 1641
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 46 ELLILDR-----GSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN 100
E+LIL + GSE + R + V+ +M + + G+ I+AP EA+AQ AY+
Sbjct: 937 EILILGQERMNLGSEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME 996
Query: 101 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 157
+A D V+T+DSD+ +FGA+ +YK F DR+ + + + + T K
Sbjct: 997 LANLVDGVVTDDSDVFLFGARN-VYK------NIFDDRKYVETYFMKDIERELGLTREKL 1049
Query: 158 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
M +L G DY GI G+G+ A + V + + D
Sbjct: 1050 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED 1083
>gi|363749773|ref|XP_003645104.1| hypothetical protein Ecym_2570 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888737|gb|AET38287.1| Hypothetical protein Ecym_2570 [Eremothecium cymbalariae
DBVPG#7215]
Length = 758
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 38/190 (20%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
++ ++VFDG P K A + KK+ A E L + Q VD MA
Sbjct: 88 LEFVLVFDG---PEKPAYKRKMGKKKAPLPAPNREFL----HTAVQWQRTNEVDSAVIMA 140
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
+++ C V+ I+ EA+A+ A L G DYV++ DSD LVFGA K++
Sbjct: 141 IDI---CENFKVEVIIGKGEAEAECARLQSDGVVDYVLSNDSDSLVFGATKVLKNFS--- 194
Query: 132 NCCFMDREKLPSALKMPLAKFTDAKF-----------RY----------MCILSGCDYWT 170
R+ LPS+ PL K + F RY IL G DY T
Sbjct: 195 ----KYRQDLPSSGTSPLRKRSSDFFVTVVDIDETTRRYPTINRKAFMLFTILVGADYNT 250
Query: 171 GIKGMGLKKA 180
G++ +GLK+A
Sbjct: 251 GLRHLGLKRA 260
>gi|254583167|ref|XP_002499315.1| ZYRO0E08932p [Zygosaccharomyces rouxii]
gi|238942889|emb|CAR31060.1| ZYRO0E08932p [Zygosaccharomyces rouxii]
Length = 581
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 47/225 (20%)
Query: 7 LLAHKIKVIMVFDGRHLPAKE--------ATEEDRRKKRDSH---KAKAAELLILDRGSE 55
LLA I I+VFDG P+ + E+D +SH + L + SE
Sbjct: 81 LLALNITFILVFDGSMKPSFKKNFGSPLSCAEDDYWSTWNSHMEIHERNGHCLKIMLDSE 140
Query: 56 AQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
++ V M ++ ++AC E +AQ A+L G+ DYV+T DSD
Sbjct: 141 GLHFMQVVKGVLGSMRISYVEACG-----------EGEAQCAWLQRNGHVDYVLTNDSDA 189
Query: 116 LVFGAKKIIYK-------LDLSGN--------------CCFMDREKLPSALKMPLAKFTD 154
LVFGA +++ L +GN +D ++L SA ++
Sbjct: 190 LVFGATRLLRNYSKFTNDLGATGNSPLGKQRSSSKDLFVTVVDLDQLNSATN---DRYNW 246
Query: 155 AKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKI 199
+ +L G DY G+KGMG KA + DPDF R +
Sbjct: 247 WSLLFFSVLLGADYNQGVKGMGKVKAAKLA-QLQDPDFAQRFRDM 290
>gi|348540973|ref|XP_003457961.1| PREDICTED: flap endonuclease 1-like [Oreochromis niloticus]
Length = 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L H IK + VFDG+ K A E R ++R + A+ + ++ V V
Sbjct: 74 MLEHGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAQAQEIGEQENIDKFTKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + GV I AP EA+A A L AG TED D L FG ++
Sbjct: 134 TKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLTFGTNILLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K+P+ +F T+ +F +CIL GCDY IKG+
Sbjct: 194 LTAS------------EAKKLPIQEFHFSRILQDIGLTNEQFIDLCILLGCDYCGTIKGI 241
Query: 176 GLKKAKDYV 184
G K+A D +
Sbjct: 242 GPKRAIDLI 250
>gi|383859686|ref|XP_003705323.1| PREDICTED: flap endonuclease 1-like [Megachile rotundata]
Length = 383
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK I VFDG+ K R +KRD + + + R+ V V
Sbjct: 74 LVEQGIKPIYVFDGKPPNLKGGELAKRAEKRDEAQKLLQAAEEAGNAEDIEKFNRRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T A Q + G+ + AP EA+AQ A L AG TED D L FG ++ +
Sbjct: 134 TQVHADEAKQLLKLMGIPYVEAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVLLRR 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L S A KMP+ +F K F +CI+ GCDY IKG+
Sbjct: 194 LTFS------------EARKMPVQEFHHDKVLEGLGLNQDEFIDLCIMLGCDYTNSIKGV 241
Query: 176 GLKKAKDYV 184
G K+A + +
Sbjct: 242 GPKRAMELI 250
>gi|357132761|ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brachypodium distachyon]
Length = 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR+ + + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDMKKQELAKRYAKREDATEELTKAVETGDTDAIERFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+AQ A L I V +ED D L FGA + +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEAPCEAEAQCAALCIKDKVYAVASEDMDSLTFGAPRFVRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CIL GCDY IKG+
Sbjct: 195 L--------MD----PSSRKIPIMEFEVAKILEELEFTMDQFIDLCILCGCDYCDSIKGI 242
Query: 176 G 176
G
Sbjct: 243 G 243
>gi|313126141|ref|YP_004036411.1| flap endonuclease 1 [Halogeometricum borinquense DSM 11551]
gi|448285981|ref|ZP_21477218.1| flap endonuclease-1 [Halogeometricum borinquense DSM 11551]
gi|312292506|gb|ADQ66966.1| flap endonuclease 1 [Halogeometricum borinquense DSM 11551]
gi|445575574|gb|ELY30047.1| flap endonuclease-1 [Halogeometricum borinquense DSM 11551]
Length = 326
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA---QSHLRQSVDV 66
H + + VFDG K+A +RR +R+ + E EA ++ ++ DV
Sbjct: 73 HDLTPVFVFDGGVTELKDAEVSERRAQREKAEELKKEAEERGDDMEAARLEARTQRLTDV 132
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
H+ + +++ V I AP E +AQ +Y+ G DYV +ED D L+ GA + +
Sbjct: 133 IHETSRGLLERLD---VPVIEAPAEGEAQASYMAKQGDVDYVGSEDYDTLLLGAPYTLRQ 189
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
L G+ MD E S L + + D + IL G D+ GI G+G K
Sbjct: 190 LTSKGDPELMDLEATLSDLDVTQEQLID-----IAILCGTDFNEGISGVGPK-------- 236
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
AL+++ +G + + ++ +++ + +F PV D
Sbjct: 237 -------TALKEVKEHGDLWTVLEARDDYIENADRVRELFRDPPVTD 276
>gi|391334775|ref|XP_003741776.1| PREDICTED: flap endonuclease 1-like [Metaseiulus occidentalis]
Length = 379
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K E R ++R+ + + + + + R+ V V
Sbjct: 74 MIENGIKPLYVFDGKPPDMKSGELEKRAERREEAQKELDKATEVGNQEDINKFQRRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + GV +VAP EA+AQ A L A TED D L FGA ++
Sbjct: 134 SKQHNADAQRLLALMGVPFLVAPCEAEAQCAELVKAQKVYAAATEDMDCLTFGASVLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAK-----------FTDAKFRYMCILSGCDYWTGIKGM 175
+ S A KMP+ + FT +F +CIL GCDY IKG+
Sbjct: 194 MTFS------------EARKMPIKEFNLPKILAELNFTQREFIDLCILLGCDYCGTIKGI 241
Query: 176 GLKKAKDYVFSIMDPDFENALRKINV 201
G K+A + + S EN L+ I+
Sbjct: 242 GPKRAIELMRS--HRCIENVLKNIDT 265
>gi|385773896|ref|YP_005646463.1| XPG I domain-containing protein [Sulfolobus islandicus HVE10/4]
gi|323478011|gb|ADX83249.1| XPG I domain protein [Sulfolobus islandicus HVE10/4]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 21 ILEEGVIPIYVFDGKPPEQKSEELERRRKIKEEAERKLERAKSEGKIEELRKYSQAILRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M RA G+ + AP E +A+ AYLNI G++ ++D D ++FGAK+++
Sbjct: 81 SNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNIIGFSWAAASQDYDSILFGAKRLVRN 140
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + L + T + + IL G DY GIKG+G
Sbjct: 141 LTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLIDISILIGTDYNPDGIKGIG- 199
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K +T + +FL V
Sbjct: 200 ------------P--ERALKIIKKYGKIEKAIEYGEISKRDITFNIDEIRSLFLKPQVVK 245
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 246 P--EETLDLN 253
>gi|304372804|ref|YP_003858300.1| flap endonuclease-1 [Sulfolobus islandicus M.16.27]
Length = 351
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 70 ILEEGVIPIYVFDGKPPEQKSEELERRRKIKEEAERKLERAKSEGKIEELRKYSQAILRL 129
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M RA G+ + AP E +A+ AYLNI G++ ++D D ++FGAK+++
Sbjct: 130 SNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNILGFSWAAASQDYDSILFGAKRLVRN 189
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + L + T + + IL G DY GIKG+G
Sbjct: 190 LTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLIDISILIGTDYNPDGIKGIG- 248
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K +T + +FL V
Sbjct: 249 ------------P--ERALKIIKKYGKIEKAIEYGEISKRDITFNIDEIRSLFLKPQVVK 294
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 295 P--EETLDLN 302
>gi|242014497|ref|XP_002427926.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
gi|212512410|gb|EEB15188.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
Length = 380
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K R +KR+ + A+ E R+ V V
Sbjct: 74 MVENGIKPVYVFDGKPPELKSGELSKRAEKREEAQKALAKAEESGNTEEVDKFSRRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ I AP EA+AQ A L AG TED D L FG+ I+
Sbjct: 134 TKDHVAECKELLKLMGIPYIEAPCEAEAQCAALVKAGKVYATATEDMDALTFGSNIILRH 193
Query: 127 LDLSGNCCFMDREKLPSA---LKMPLAKF--TDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
L F + K+P L LA+ T +F +CIL GCDY IKG+G K+A
Sbjct: 194 L------TFSEARKMPVQEIYLDKVLAELEMTQNEFIDLCILLGCDYCDSIKGIGPKRAI 247
Query: 182 DYV 184
+ +
Sbjct: 248 ELI 250
>gi|229579856|ref|YP_002838255.1| flap endonuclease-1 [Sulfolobus islandicus Y.G.57.14]
gi|238620410|ref|YP_002915236.1| flap endonuclease-1 [Sulfolobus islandicus M.16.4]
gi|284998466|ref|YP_003420234.1| Xpg I [Sulfolobus islandicus L.D.8.5]
gi|304372803|ref|YP_003858299.1| flap-1 endonuclease [Sulfolobus islandicus L.S.2.15]
gi|385776538|ref|YP_005649106.1| XPG I domain-containing protein [Sulfolobus islandicus REY15A]
gi|228010571|gb|ACP46333.1| XPG I domain protein [Sulfolobus islandicus Y.G.57.14]
gi|238381480|gb|ACR42568.1| XPG I domain protein [Sulfolobus islandicus M.16.4]
gi|284446362|gb|ADB87864.1| Xpg I [Sulfolobus islandicus L.D.8.5]
gi|323475286|gb|ADX85892.1| XPG I domain protein [Sulfolobus islandicus REY15A]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 21 ILEEGVIPIYVFDGKPPEQKSEELERRRKIKEEAERKLERAKSEGKIEELRKYSQAILRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M RA G+ + AP E +A+ AYLNI G++ ++D D ++FGAK+++
Sbjct: 81 SNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNILGFSWAAASQDYDSILFGAKRLVRN 140
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + L + T + + IL G DY GIKG+G
Sbjct: 141 LTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLIDISILIGTDYNPDGIKGIG- 199
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K +T + +FL V
Sbjct: 200 ------------P--ERALKIIKKYGKIEKAIEYGEISKRDITFNIDEIRSLFLKPQVVK 245
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 246 P--EETLDLN 253
>gi|227828219|ref|YP_002829999.1| flap endonuclease-1 [Sulfolobus islandicus M.14.25]
gi|227460015|gb|ACP38701.1| XPG I domain protein [Sulfolobus islandicus M.14.25]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 21 ILEEGVIPIYVFDGKPPEQKSEELERRRKIKEEAERKLERAKSEGKIEELRKYSQAILRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M RA G+ + AP E +A+ AYLNI G++ ++D D ++FGAK+++
Sbjct: 81 SNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNILGFSWAAASQDYDSILFGAKRLVRN 140
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + L + T + + IL G DY GIKG+G
Sbjct: 141 LTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLIDISILIGTDYNPDGIKGIG- 199
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K +T + +FL V
Sbjct: 200 ------------P--ERALKIIKKYGKIEKAIEYGEISKRDITFNIDEIRSLFLKPQVVK 245
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 246 P--EETLDLN 253
>gi|157169412|ref|XP_001651504.1| flap endonuclease-1 [Aedes aegypti]
gi|122094730|sp|Q178M1.1|FEN1_AEDAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|108878396|gb|EAT42621.1| AAEL005870-PA [Aedes aegypti]
Length = 380
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
LL + IK + VFDG+ P ++ E +R ++ KA LD+ +EA
Sbjct: 74 LLENGIKPVYVFDGKP-PDLKSGELTKRAEKREEAQKA-----LDKATEAGVTEDIDKFN 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + + + + GV + AP EA+AQ A L G TED D L FG+
Sbjct: 128 RRLVKVTKQHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKGGKVYATATEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F T +F +CIL GCDY
Sbjct: 188 NILLRHLTFS------------EARKMPVQEFNYDKILQGLELTRDEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
I+G+G KKA + +
Sbjct: 236 DSIRGIGPKKAVELI 250
>gi|380015033|ref|XP_003691516.1| PREDICTED: flap endonuclease 1-like [Apis florea]
Length = 383
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 27/191 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKA--KAAELLILDRGSEAQSHLRQSV 64
L+ IK + +FDG+ K R +KRD + +AAE + + R+ V
Sbjct: 74 LVEQGIKPVYIFDGKPPNLKGGELAKRAEKRDEAQKLLQAAEEA--GNAEDIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + A Q + G+ I AP EA+AQ A + AG TED D L FG ++
Sbjct: 132 KVTKEHAEEAKQLLKLMGIPYIDAPCEAEAQCAAMVKAGKVFATATEDMDALTFGCNILL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIK 173
+L S A KMP+ +F K F +CI+ GCDY IK
Sbjct: 192 RRLTFS------------EARKMPVQEFHQDKVLEGLELSHDEFIDLCIMLGCDYTNSIK 239
Query: 174 GMGLKKAKDYV 184
G+G K+A + +
Sbjct: 240 GVGPKRAIELI 250
>gi|407034393|gb|EKE37191.1| flap nuclease, putative [Entamoeba nuttalli P19]
Length = 376
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH--LRQSV 64
L+ IK + VFDG+ P + E ++K ++ KA+ L+ G + Q+ ++++
Sbjct: 75 LIESGIKPVYVFDGK--PPEMKDGELNKRKENAQKAQEQLDKALEEGDKEQAKKLMKRTA 132
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+T + + V + + G+ CI A EA+ A L AG TED D L G++ ++
Sbjct: 133 RMTKEQSDEVKKLLQLMGIPCIEANCEAEGSCAALVKAGKCYATATEDMDALTLGSEHVV 192
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
K S N RE S++ + FT +F +CIL GCDY IKG+G
Sbjct: 193 RKFSASDNKKDPIREYSLSSI-LEETGFTMEQFIDLCILLGCDYCETIKGVG 243
>gi|288931681|ref|YP_003435741.1| flap structure-specific endonuclease [Ferroglobus placidus DSM
10642]
gi|288893929|gb|ADC65466.1| flap structure-specific endonuclease [Ferroglobus placidus DSM
10642]
Length = 336
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 102/244 (41%), Gaps = 43/244 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRR---KKRDSHKAKAAELLILDRGSEAQSHLRQS 63
L+ IK I VFDG P + E +RR KK K K A L+ G +A+ + + +
Sbjct: 68 LIEIGIKPIYVFDGEP-PEFKKKELERRAELKKEAEEKWKIA----LEAGEDAKKYAQAT 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V + + G+ + AP E +AQ AY+ G ADY ++D D L+FG+ K+
Sbjct: 123 AKVDEYIVESSKTLLEYLGIPYVQAPSEGEAQAAYMVRKGDADYTGSQDYDSLLFGSPKL 182
Query: 124 IYKLDLSGNCCFMDREKLPSA------------LKMPLAKF--TDAKFRYMCILSGCDYW 169
L ++G + KLP L+ L K T + + IL G DY
Sbjct: 183 ARNLTVTG------KRKLPGKNVYVEIKPEIIDLEANLKKLGITREQLIDVAILVGTDYN 236
Query: 170 TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
G+KG+G KKA YV YG + +K+ + + FL
Sbjct: 237 EGVKGIGAKKALKYV---------------KTYGDVKKVLKVLRVEIEHLDEIREFFLNP 281
Query: 230 PVYD 233
P D
Sbjct: 282 PTTD 285
>gi|24987745|pdb|1MC8|A Chain A, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
gi|24987746|pdb|1MC8|B Chain B, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
Length = 343
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK VFDG+ K E RR+ R+ + K E L EA+ + +++ V
Sbjct: 68 LMEAGIKPAYVFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ I AP E +AQ AY+ G ++D D L+FGA ++I
Sbjct: 128 NEMLIEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRN 187
Query: 127 LDLSGNCCFMDREKLPSA-----LKMPLA---------KFTDAKFRYMCILSGCDYW-TG 171
L ++G + K+P +K L K T K + IL G DY G
Sbjct: 188 LTITG------KRKMPGKDVYVEIKPELVVLDEVLKELKITREKLIELAILVGTDYNPGG 241
Query: 172 IKGMGLKKAKDYVFSIMDP 190
+KG+G KKA + V DP
Sbjct: 242 VKGIGPKKALEIVRYSRDP 260
>gi|224000509|ref|XP_002289927.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975135|gb|EED93464.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 929
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 4 IHMLLAHKIKVI-MVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQ 62
H+L ++ I +VFDG +P K T R KR + +A L+ R +EA +
Sbjct: 96 THLLQYAQVSSIYLVFDGIRVPLKSGTNASRESKRQQNIVEARRLMSAGRRNEALDKYKS 155
Query: 63 SVDVTHKMA----------------LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYAD 106
V T +MA L V + V C+ +P+EADAQ+A L GY
Sbjct: 156 CVKGTEEMARVVCAAVEKEFGKDGKLGVGKKWGVGRVKCVFSPYEADAQLAKLCADGYCH 215
Query: 107 YVITEDSDLLVFGA 120
V+TEDSD+LV+ A
Sbjct: 216 GVVTEDSDVLVYSA 229
>gi|28380019|sp|Q976H6.2|FEN_SULTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|342306106|dbj|BAK54195.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 351
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH------KAKAAELLILDRGSEAQSHL 60
+L I I VFDG+ P ++A E +RRKK +AK + + SE + +
Sbjct: 68 ILEEGIIPIYVFDGKP-PEQKAQELERRKKVKEEAEKKLEQAKTEGSI---KTSELKKYA 123
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ +T++MA + +A G+ + AP E +A+ AY+NI G + ++D D L+FGA
Sbjct: 124 QMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLLFGA 183
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGC 166
K++I L LSG + KLP L L K T + + I+ G
Sbjct: 184 KRLIRNLTLSG------KRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 237
Query: 167 DYW-TGIKGMGLKKA 180
DY GIKG G+K A
Sbjct: 238 DYNPDGIKGYGVKTA 252
>gi|399218750|emb|CCF75637.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRG--SEA 56
M + LL I+ I VFDG AK D KR K +A +LL ++ G E
Sbjct: 70 MLRVAALLELGIRPIYVFDGEPPQAKS----DTLLKRKERKEEALKLLEQAMETGDLEEI 125
Query: 57 QSHLRQSVDVTH---KMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
+ ++V V+ K A+ ++ C G+ + A EA+AQ AY+ G AD TED+
Sbjct: 126 KKQTSRTVRVSREQSKQAMKFLELC---GLPVVEASQEAEAQCAYMVKWGIADVASTEDT 182
Query: 114 DLLVFGAKKIIYKLD----LSGN-------------CCFMDREKLPSALKMPLAKFTDAK 156
D L FG +I L +S N +D K + K+ + +F D
Sbjct: 183 DCLTFGTPVLIRNLSNALAISSNKNSKFNSKSPKSHLLRIDLNKTLNGFKLNINQFVD-- 240
Query: 157 FRYMCILSGCDYWTGIKGMGLKKA 180
+CIL GCDY +KG+G K A
Sbjct: 241 ---LCILCGCDYCGKLKGVGPKTA 261
>gi|325186427|emb|CCA20932.1| flap endonuclease 1 putative [Albugo laibachii Nc14]
Length = 389
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 32/263 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAK-------AAELLILDRGSEAQSH 59
L+ + IK + VFDG+ P ++ E ++RK R + K A L+ +DR S
Sbjct: 79 LMENGIKPVYVFDGKP-PVMKSKELEKRKDRRTAANKSLEEATEAGNLVEIDRFS----- 132
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++ V T + + + + R GV + AP EA+A A L TED D+L FG
Sbjct: 133 -KRLVHATSQHSQDCKELLRLMGVPVLTAPCEAEATCATLAKHHKVYASGTEDMDVLTFG 191
Query: 120 AKKIIYKLDLSGNCCFMDRE-KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ ++ ++ N E KL ALK T+ +F +CIL GCDY I+G+G K
Sbjct: 192 TPVLYRRMTVAANKKVPILEIKLEQALKA--LDLTEQQFVDLCILCGCDYCDSIRGIGPK 249
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS---FHNTNLMFLYQPVYDPV 235
KA + + EN L+ + G V I +E+L + MF V
Sbjct: 250 KAFNGIKE--HKTIENFLQHLQQSNNKG--VVIPEEWLGDDPIYKRAREMF--------V 297
Query: 236 SKEVVPLNPLESEMRDEVFSQLS 258
+ EVV +N ++ + ++ + +LS
Sbjct: 298 NAEVVDVNEVDLKWKEPLADELS 320
>gi|14591211|ref|NP_143287.1| flap endonuclease-1 [Pyrococcus horikoshii OT3]
gi|28380013|sp|O50123.1|FEN_PYRHO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3257838|dbj|BAA30521.1| 343aa long hypothetical 5' nuclease [Pyrococcus horikoshii OT3]
Length = 343
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK VFDG+ K E RR+ R+ + K E L EA+ + +++ V
Sbjct: 68 LMEAGIKPAYVFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ I AP E +AQ AY+ G ++D D L+FGA ++I
Sbjct: 128 NEMLIEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRN 187
Query: 127 LDLSGNCCFMDREKLPSA-----LKMPLA---------KFTDAKFRYMCILSGCDYW-TG 171
L ++G + K+P +K L K T K + IL G DY G
Sbjct: 188 LTITG------KRKMPGKDVYVEIKPELVVLDEVLKELKITREKLIELAILVGTDYNPGG 241
Query: 172 IKGMGLKKAKDYVFSIMDP 190
+KG+G KKA + V DP
Sbjct: 242 VKGIGPKKALEIVRYSRDP 260
>gi|150402483|ref|YP_001329777.1| flap endonuclease-1 [Methanococcus maripaludis C7]
gi|150033513|gb|ABR65626.1| XPG I [Methanococcus maripaludis C7]
Length = 324
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML +++ I VFDG+ KE T+E+RRK R+ E + E Q + +
Sbjct: 64 KTIYML-ENEMTPIWVFDGKSHDLKEKTKEERRKSRNGALDSYLEAKEQNNLEEMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ + K N + G+ I AP E +AQ A L + A VI++D D +++GA+
Sbjct: 123 RANFLDKKTIDNSKKLLELMGIPYINAPSEGEAQCAELVKSNDAFCVISQDYDSILYGAE 182
Query: 122 KIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
++ + S + ++ +K S L + L + D + IL G DY G+KG G KK
Sbjct: 183 NVVKNITSSNKDIELIELQKTLSELNVSLNQLID-----VAILIGTDYNPGGLKGFGPKK 237
Query: 180 AKDYV 184
A D V
Sbjct: 238 AIDTV 242
>gi|410722033|ref|ZP_11361349.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
gi|410597930|gb|EKQ52534.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
Length = 328
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK I VFDG+ K+ T++ RR+ ++ + K E L R +A+ +S +
Sbjct: 68 LVEKGIKPIYVFDGQSSALKKETQQKRREIKEESERKWKEALEEGRLDDARKFAVRSSRM 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ ++ + + G+ I A E +AQ +Y+ G A V ++D D ++FGA +++
Sbjct: 128 SPEIVEGSKKLIKLMGIPYIQAKGEGEAQASYMVARGDAWCVASQDYDCMLFGAPRMVKN 187
Query: 127 LDLSGNCC---FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +SG ++ EK+ L + + D + I+ G D+ GIKG+G KK
Sbjct: 188 LTISGTQNTPELIELEKILGTLDITREQLVD-----LAIMVGTDFNQGIKGIGAKKG 239
>gi|15920393|ref|NP_376062.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 304
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH------KAKAAELLILDRGSEAQSHL 60
+L I I VFDG+ P ++A E +RRKK +AK + + SE + +
Sbjct: 21 ILEEGIIPIYVFDGKP-PEQKAQELERRKKVKEEAEKKLEQAKTEGSI---KTSELKKYA 76
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ +T++MA + +A G+ + AP E +A+ AY+NI G + ++D D L+FGA
Sbjct: 77 QMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLLFGA 136
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGC 166
K++I L LSG + KLP L L K T + + I+ G
Sbjct: 137 KRLIRNLTLSG------KRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 167 DYW-TGIKGMGLKKA 180
DY GIKG G+K A
Sbjct: 191 DYNPDGIKGYGVKTA 205
>gi|123335114|ref|XP_001294157.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121871805|gb|EAX81227.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 335
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
L+ +K + VFDG+ P + E +R +R K E I EA R++V
Sbjct: 43 LIESGVKPVYVFDGKP-PEMKGAELAKRLERREEAQKELEKAIESGDQEAIDKFSRRTVH 101
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ Q GV + AP EA+A+ A LN AG D + TED D L F ++I
Sbjct: 102 LDKTQVEECKQLLECLGVPYVDAPCEAEAECAALNKAGLVDAMATEDMDSLAFATPQLIR 161
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
L D ++ + M + T +F CIL GCDY IKG+G K A + +
Sbjct: 162 HLSYGAK--GDDLLQIDYKIMMEKSGLTREEFVDFCILMGCDYCDTIKGIGKKHAYELI 218
>gi|55733906|gb|AAV59413.1| putative flap endonuclease 1 [Oryza sativa Japonica Group]
Length = 380
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKE-ATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
LL IK + VFDG+ L +E A D KR+ + E + + +++
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRHDMYSKREDATKELTEAVEEGDKDAIEKFSKRT 134
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V VT + + R GV + AP EA+A+ A L I V +ED D L FGA +
Sbjct: 135 VKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDMDSLTFGAPRF 194
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGI 172
+ L MD PS+ K+P+ +F AK F +CILSGCDY I
Sbjct: 195 LRHL--------MD----PSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSI 242
Query: 173 KGMGLKKA 180
KG+G + A
Sbjct: 243 KGIGGQTA 250
>gi|317376191|sp|B9EMY6.1|FEN1_SALSA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|221220444|gb|ACM08883.1| Flap endonuclease 1-B [Salmo salar]
gi|221221934|gb|ACM09628.1| Flap endonuclease 1-B [Salmo salar]
Length = 380
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 31/193 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL----RQ 62
+L H IK + VFDG+ P ++ E ++R +R +A+A +LL + + Q ++ ++
Sbjct: 74 MLEHGIKPVYVFDGKP-PQLKSGELEKRGER---RAEAEKLLAQAQEAGEQENIDKFSKR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + GV I AP EA+A A L AG TED D L FG
Sbjct: 130 LVKVTQQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLTFGTGV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A K+P+ +F T +F +CIL GCDY
Sbjct: 190 LLRHLTAS------------EAKKLPIQEFQFTRLLQDINLTHEQFIDLCILLGCDYCGT 237
Query: 172 IKGMGLKKAKDYV 184
IKG+G K+A D +
Sbjct: 238 IKGIGPKRAIDLI 250
>gi|229581484|ref|YP_002839883.1| flap endonuclease-1 [Sulfolobus islandicus Y.N.15.51]
gi|228012200|gb|ACP47961.1| XPG I domain protein [Sulfolobus islandicus Y.N.15.51]
Length = 302
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 21 ILEEGVIPIYVFDGKPPEQKSEELERRRKIKEEAERKLERAKSEGKIEELRKYSQAILRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M RA G+ + AP E +A+ AYLNI G++ ++D D ++FGAK+++
Sbjct: 81 SNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNILGFSWAAASQDYDSILFGAKRLVRN 140
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + L + T + + IL G DY GIKG+G
Sbjct: 141 LTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLIDISILIGTDYNPDGIKGIG- 199
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K +T + +FL +
Sbjct: 200 ------------P--ERALKIIKKYGKIEKAIEYGEISKRDITFNIDEIRSLFLKPQIVK 245
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 246 P--EETLDLN 253
>gi|395330939|gb|EJF63321.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 429
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K R +KR+ K E + R++V V
Sbjct: 93 MVENGIKPAYVFDGKPPELKSGVLSKRFEKREEAKEDGEEAKETGTAEDVDRFSRRTVKV 152
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ +VAP EA+AQ A L G +ED D L FGA ++
Sbjct: 153 TREHNEECRKLLTLMGIPFVVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFGAPILLRH 212
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S + EK L+M +++FT+ +CIL GCDY IKG+G K A
Sbjct: 213 LTFSEARKTPISEISLEKALEGLEMDMSQFTE-----LCILLGCDYLEPIKGVGPKGA 265
>gi|13541391|ref|NP_111079.1| flap endonuclease-1 [Thermoplasma volcanium GSS1]
gi|28380020|sp|Q97B98.1|FEN_THEVO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|14324774|dbj|BAB59701.1| FLAP endonuclease-1 [Thermoplasma volcanium GSS1]
Length = 335
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD- 65
L+ + IK I VFDG+ P K T E R+ ++ KA+ E + RG E ++
Sbjct: 68 LVENGIKPIFVFDGKPSPLKNRTLEIRQLAKEKAKAELEEA--ISRGEENLKQYYSRINY 125
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T ++ + + G+ + AP E +AQ +Y+ AD VI++D D L+FGAKKI+
Sbjct: 126 ITPQIVNDTKELLTYMGIPYVDAPSEGEAQASYMTRKD-ADGVISQDYDCLLFGAKKILR 184
Query: 126 KLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGCDYWTG 171
+ G R K+P L L K + + IL G D+ G
Sbjct: 185 NFAIYG------RRKVPRKNVYRTVYPEYVMLDEVLKKNGINQDQLIEIGILVGTDFNEG 238
Query: 172 IKGMGLKKA 180
IKG+G KKA
Sbjct: 239 IKGIGAKKA 247
>gi|347522663|ref|YP_004780233.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
gi|343459545|gb|AEM37981.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
Length = 350
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 103/243 (42%), Gaps = 36/243 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQ-SVD 65
L+ H IKV+ VFDG+ P ++ E +RRKK S AK E I EA Q +
Sbjct: 71 LIEHGIKVVYVFDGKP-PEIKSIEIERRKKVKSEAAKKYEEAIKKGDLEAARRYAQMASR 129
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T M + A GV + AP + +AQ AY+ G ++D D L+FGA +++
Sbjct: 130 LTEDMVKEAKRLLDAMGVPWVQAPADGEAQAAYMARKGDVWAAASQDYDALLFGAPRLVR 189
Query: 126 KLDLSGNCCFMDREKLPSA-----LKMPLAKF---------TDAKFRYMCILSGCDYWT- 170
L ++G R KLP +K L + T + + IL G DY
Sbjct: 190 NLTITG------RRKLPKKDVYVEIKPELIELDKLLKALGITREQLIVIGILVGTDYNPD 243
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
G++G+G K A V + PD LR + EF T FL P
Sbjct: 244 GVRGIGPKTALRMVKA--QPDVRKLLRSLP-----------RNEFPTEPEKIFEYFLNPP 290
Query: 231 VYD 233
V D
Sbjct: 291 VTD 293
>gi|307173481|gb|EFN64391.1| Flap endonuclease 1-B [Camponotus floridanus]
Length = 382
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 25/201 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
L+ IK + VFDG+ P ++ E +R +R K + D EA R+ V
Sbjct: 74 LVEQGIKPVYVFDGKP-PNLKSGELAKRAERRDEAQKLLQAAEEDGNVEAIDKFSRRLVK 132
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT A Q + G+ I AP EA+AQ A L AG TED D L FG ++
Sbjct: 133 VTKNHADEAKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATEDMDALTFGCDILLR 192
Query: 126 KLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
+L LS + KLP + L++ +F D +CI+ GCDY IKG+
Sbjct: 193 RLTLS------EARKLPVQEIHMDKVLTGLELNHDEFID-----LCIMLGCDYTGSIKGV 241
Query: 176 GLKKAKDYV--FSIMDPDFEN 194
G K+A + + + +D EN
Sbjct: 242 GPKRAIELIKNYRSLDKIIEN 262
>gi|317376190|sp|D3BN56.1|FEN1_POLPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|281203217|gb|EFA77418.1| XPG [Polysphondylium pallidum PN500]
Length = 388
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 13/184 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK I VFDG+ K R +R + + E + + Q ++++
Sbjct: 75 LMTRGIKPIYVFDGKAPVLKSGELAKRYARRKEAEQQLEEANEVGNSEDVQKFQKRTISA 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ K + GV + AP EA+AQ A L G A +ED D L G ++ +
Sbjct: 135 SRKQNEECKKLLELMGVPIVQAPCEAEAQCAELCKGGKAWATGSEDMDSLTLGTTILLRR 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDA------KFRYMCILSGCDYWTGIKGMGLKKA 180
L F + KLP +++ L K D +F +CIL GCDY IKG+G KK+
Sbjct: 195 L------TFSEARKLP-IMEIELEKVLDGLDLTHDQFVDLCILLGCDYCDTIKGIGPKKS 247
Query: 181 KDYV 184
D +
Sbjct: 248 FDMI 251
>gi|435846409|ref|YP_007308659.1| flap endonuclease 1 [Natronococcus occultus SP4]
gi|433672677|gb|AGB36869.1| flap endonuclease 1 [Natronococcus occultus SP4]
Length = 325
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH-------KAKAAELLILDRG 53
++ + H + +MVFDG K E RR++R S+ + + E+ I
Sbjct: 63 VQGVARFFEHDVTPVMVFDGGPSQLKADEIESRREQRRSYEEQLETAREEGDEVAIAQLE 122
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
S Q L ++ T + L ++ V + AP E +AQ A++ G ADYV +ED
Sbjct: 123 SRTQ-RLTPTIQETSRELLELLD------VPVVEAPAEGEAQAAHIVKRGDADYVGSEDY 175
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
D L+FGA + +L G+ MD E ++ L + DA IL G D+ G+
Sbjct: 176 DALLFGAPLTLRQLTSKGDPELMDLEATLERHELTLEQLIDA-----AILIGTDFNEGVS 230
Query: 174 GMGLKKA 180
G+G K A
Sbjct: 231 GIGPKTA 237
>gi|219850742|ref|YP_002465174.1| flap endonuclease-1 [Methanosphaerula palustris E1-9c]
gi|254788674|sp|B8GIA0.1|FEN_METPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|219545001|gb|ACL15451.1| XPG I domain protein [Methanosphaerula palustris E1-9c]
Length = 333
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 6/180 (3%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L I+ + +FDG+ K+ T E RR+ R + L EA R S V
Sbjct: 69 FLEKGIRPVYIFDGKPPALKQETIESRREVRREAGVQWEAALARGDQEEAYKQARASSRV 128
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T ++ + GV C+ AP E +AQ A + +G Y +++D D L+FGA ++
Sbjct: 129 TPEIIATSKELLTLMGVPCVQAPSEGEAQAASMAASGAVTYAVSQDYDSLLFGAPLLVRN 188
Query: 127 LDLS------GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +S G + E + + T + IL G D+ GI+G+G K A
Sbjct: 189 LTVSSKRRVQGRTIAVQPESIRLDEVLGGLGITREQLIEAGILIGTDFNPGIRGVGPKTA 248
>gi|448358107|ref|ZP_21546792.1| flap endonuclease-1 [Natrialba chahannaoensis JCM 10990]
gi|445646678|gb|ELY99662.1| flap endonuclease-1 [Natrialba chahannaoensis JCM 10990]
Length = 325
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAK-------AAELLILDRGSEAQSHLRQ 62
+ + +MVFDG KE E RR++R +++A+ E+ I S Q L
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRREQRQTYEAQLETAREEGDEVAIAQLESRTQ-RLTP 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
++ T + L ++ V + AP E +AQ A++ G ADYV +ED D L+FG+
Sbjct: 131 TIQETSRELLRLLD------VPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLFGSPY 184
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L G+ MD E + L + DA IL G D+ GI G+G K A
Sbjct: 185 TLRQLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AILIGTDFNEGISGIGPKTA 237
>gi|429217578|ref|YP_007175568.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
gi|429134107|gb|AFZ71119.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
Length = 351
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 14/255 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ +K I VFDG+ K+ EDR +R + K + + EA+ + + S +
Sbjct: 74 LIEEGVKPIYVFDGKPPEMKKKEIEDRINRRQQYAEKYQKAKQEGKIEEAKKYAQASTSL 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++KM + Q G+ + AP + +AQ AY+ G ++D D L+FG+ K++
Sbjct: 134 SNKMVEDAKQLLTYMGIPWVQAPADGEAQAAYMAKKGDVYATGSQDYDSLLFGSPKLLRN 193
Query: 127 LDLSGNCCFMDREKL----PSALK----MPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++E+ P + + + T + + IL G D+ G KG G
Sbjct: 194 LAITGKRKLPNKEEYIEIKPELINLNDMLKALEITREQLIVIGILLGTDFNPDGFKGYGP 253
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
K A YV DP AL + V + +KI + FL N N ++ DP +
Sbjct: 254 KTALKYVKEHRDPI--KALSSLKVNDEDIDIMKIYEYFLNPPSNPNYKIEWR---DPNEE 308
Query: 238 EVVPLNPLESEMRDE 252
+++ + E + D+
Sbjct: 309 KIIDMLVREHDFNDD 323
>gi|110668340|ref|YP_658151.1| flap endonuclease-1 [Haloquadratum walsbyi DSM 16790]
gi|121684788|sp|Q18HK0.1|FEN_HALWD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|109626087|emb|CAJ52538.1| flap endonuclease Fen1 [Haloquadratum walsbyi DSM 16790]
Length = 326
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 36/264 (13%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSE-AQSHLRQSVDVTH 68
H + + VFDG K+ ++RR R+ +A + +RG E A S L T
Sbjct: 73 HDLTPVFVFDGGVTELKDEEVQERRVARE--EAVELQAAAEERGDELAASRLEAR---TQ 127
Query: 69 KMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++ + + R V I AP E +AQ A + I G DYV +ED D L+FGA +
Sbjct: 128 RLTETIHETTRGLLNRLDVPIIEAPAEGEAQAAEMAIRGDVDYVGSEDYDTLLFGAPYTV 187
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+L G+ MD L + LK T + + IL G D+ GI G+G
Sbjct: 188 RQLTSKGDPELMD---LQTTLKNQ--NLTREQLVDVAILCGTDFNDGISGIGPA------ 236
Query: 185 FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP 244
A+ IN +G + S + EF+ +FL PV + + +NP
Sbjct: 237 ---------TAISAINDHGDLWSVLDARDEFIQHADRVRSLFLDPPVTNEYTLHTT-INP 286
Query: 245 LESEMRDEVFSQLSLKELELPKDQ 268
R V + + E+P D+
Sbjct: 287 DMDAARSYV-----VDDWEVPADE 305
>gi|289582877|ref|YP_003481343.1| flap structure-specific endonuclease [Natrialba magadii ATCC 43099]
gi|448283660|ref|ZP_21474932.1| flap endonuclease-1 [Natrialba magadii ATCC 43099]
gi|289532430|gb|ADD06781.1| flap structure-specific endonuclease [Natrialba magadii ATCC 43099]
gi|445573260|gb|ELY27783.1| flap endonuclease-1 [Natrialba magadii ATCC 43099]
Length = 325
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ + +MVFDG KE E RR++R +++ E L R + + Q T +
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRREQRQTYE----EQLETAREEGDEVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLFGAPYTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + L + DA IL G D+ GI G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AILIGTDFNEGISGIGPKTA 237
>gi|242032391|ref|XP_002463590.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
gi|241917444|gb|EER90588.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
Length = 477
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L IK + VFDG K+ R KRD + + + +++V V
Sbjct: 151 MLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLNRAIEIGDEDAVEKFSKRTVKV 210
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K + + R GV + AP EA+AQ A L V +ED D L FGA++ +
Sbjct: 211 TRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYAVASEDMDSLTFGARRFLRH 270
Query: 127 LDLSG----NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L G D K+ L + + +F D +CILSGCDY IKG+G ++A
Sbjct: 271 LTDLGYKKSPVTEFDVSKVLEELGLTMDQFID-----LCILSGCDYCENIKGIGGQRA 323
>gi|308159723|gb|EFO62244.1| Flap structure-specific endonuclease [Giardia lamblia P15]
Length = 361
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDS---HKAKAAELLILDRGSEAQS 58
K I M A IK I VFDG+ K+ E RR+ R++ + KA E L+R A+
Sbjct: 71 KVIRMAEAG-IKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGNLER---AKQ 126
Query: 59 HLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
R++V VT + + G+ I+A EA+AQ + + V + D D+L F
Sbjct: 127 LSRRTVKVTQQHCKQAERLLDVLGIPYIIAAGEAEAQCVAMAKERLCEGVASSDLDVLAF 186
Query: 119 GAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMG 176
G+ +I L G DRE + L + L + F+ +F +CIL GCDY ++G+G
Sbjct: 187 GSPCLIRNLAQGG-----DREIMEINLNIVLKELGFSYDEFLDLCILCGCDYANSLEGIG 241
Query: 177 LKKA 180
K A
Sbjct: 242 PKTA 245
>gi|67470614|ref|XP_651270.1| FEN-1 nuclease [Entamoeba histolytica HM-1:IMSS]
gi|317374901|sp|C4M6G8.1|FEN1_ENTHI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56467989|gb|EAL45884.1| FEN-1 nuclease, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710440|gb|EMD49517.1| Flap endonuclease, putative [Entamoeba histolytica KU27]
Length = 376
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH--LRQSV 64
L+ IK I VFDG+ P + E ++K ++ KA+ L+ G + Q+ ++++
Sbjct: 75 LIESGIKPIYVFDGK--PPEMKDGELHKRKENAQKAQEQLDKALEEGDKEQAKKLMKRTA 132
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+T + + V + + G+ CI A EA+ A L AG TED D L G++ ++
Sbjct: 133 RMTKEQSDEVKKLLQLMGIPCIEANCEAEGTCAALVKAGKCYATATEDMDALTLGSEHVV 192
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
K + N RE S++ + FT +F +CIL GCDY IKG+G
Sbjct: 193 RKFSANDNKKDPIREYSLSSI-LEETGFTMEQFIDLCILLGCDYCETIKGVG 243
>gi|448337894|ref|ZP_21526967.1| flap endonuclease-1 [Natrinema pallidum DSM 3751]
gi|445624854|gb|ELY78227.1| flap endonuclease-1 [Natrinema pallidum DSM 3751]
Length = 325
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K+ E RR++R S++A+ L R + Q T +
Sbjct: 72 HDITPVMVFDGGPSELKDDEIESRREQRRSYEAQ----LETAREEGDAVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FG+ +
Sbjct: 128 LTPTIQETSRDLLRLLDVPIVEAPAEGEAQAAHMVKRGDADYVGSEDYDALLFGSPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLAQHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|448318654|ref|ZP_21508168.1| flap endonuclease-1 [Natronococcus jeotgali DSM 18795]
gi|445598248|gb|ELY52311.1| flap endonuclease-1 [Natronococcus jeotgali DSM 18795]
Length = 325
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKR-------DSHKAKAAELLILDRGSEAQSHLRQ 62
H + +MVFDG K E RR++R ++ + + E+ I S Q L
Sbjct: 72 HDVTPVMVFDGGPSQLKSEEIESRREQRRTYEEQLETAREEGDEVAIAQLESRTQ-RLTP 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
++ T + L ++ V + AP E +AQ A+L G ADYV +ED D L+FGA
Sbjct: 131 TIQETSRELLELLD------VPVVEAPAEGEAQAAHLVKRGDADYVGSEDYDALLFGAPL 184
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L G+ MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 185 TLRQLTSKGDPELMDLEATLERHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|385803787|ref|YP_005840187.1| flap endonuclease Fen1 [Haloquadratum walsbyi C23]
gi|339729279|emb|CCC40515.1| flap endonuclease Fen1 [Haloquadratum walsbyi C23]
Length = 326
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 36/264 (13%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSE-AQSHLRQSVDVTH 68
H + + VFDG K+ ++RR R+ +A + +RG E A S L T
Sbjct: 73 HDLTPVFVFDGGVTELKDEEVQERRVARE--EAVELQAAAEERGDELAASRLEAR---TQ 127
Query: 69 KMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++ + + R V I AP E +AQ A + I G DYV +ED D L+FGA +
Sbjct: 128 RLTETIHETTRGLLNRLDVPIIEAPAEGEAQAAEMAIRGDVDYVGSEDYDTLLFGAPYTV 187
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+L G+ MD L + LK T + + IL G D+ GI G+G
Sbjct: 188 RQLTSKGDPELMD---LQTTLKNQ--NLTREQLVDVAILCGTDFNDGISGIGPA------ 236
Query: 185 FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP 244
A+ IN +G + S + EF+ +FL PV + + +NP
Sbjct: 237 ---------TAISAINDHGDLWSVLDARDEFIQHADRVRSLFLDPPVTNEYTLHTA-INP 286
Query: 245 LESEMRDEVFSQLSLKELELPKDQ 268
R V + + E+P D+
Sbjct: 287 DMDAARSYV-----VDDWEVPADE 305
>gi|118596594|dbj|BAF37956.1| putative flap endonuclease-1 [Sulfolobus sp. G81]
Length = 304
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 31/195 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH------KAKAAELLILDRGSEAQSHL 60
+L I I VFDG+ P ++A E +RRKK +AKA + + SE + +
Sbjct: 21 ILEEGIIPIYVFDGKP-PEQKAQELERRKKVKEEAEKKLEQAKAEGNI---KTSELKKYA 76
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ ++++MA + +A G+ + AP E +A+ AY+NI G + ++D D L+FGA
Sbjct: 77 QMSIKLSNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLLFGA 136
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGC 166
K+++ L LSG + KLP L L K T + + I+ G
Sbjct: 137 KRLVRNLTLSG------KRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 167 DYW-TGIKGMGLKKA 180
DY GIKG G+K A
Sbjct: 191 DYNPDGIKGYGVKTA 205
>gi|307214986|gb|EFN89831.1| Flap endonuclease 1-B [Harpegnathos saltator]
Length = 380
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
L+ IK + VFDG+ P + E +R +R K + D +EA R+ V
Sbjct: 74 LVEQGIKPVYVFDGKP-PNLKGGELAKRAERRDEAQKLLQAAEEDGDAEAIDKFNRRLVK 132
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT A Q + G+ I AP EA+AQ A L AG TED D L FG ++
Sbjct: 133 VTKTHAEEAKQLLKLMGIPYIDAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVLLR 192
Query: 126 KLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
+L F + KLP L++ +F D +CI+ GCDY IKG+
Sbjct: 193 RL------TFSEARKLPVQEIHFDKVLGGLELNHNEFID-----LCIMLGCDYTGSIKGV 241
Query: 176 GLKKAKDYV 184
G K+A + +
Sbjct: 242 GPKRAIELI 250
>gi|448344743|ref|ZP_21533645.1| flap endonuclease-1 [Natrinema altunense JCM 12890]
gi|445636849|gb|ELY90006.1| flap endonuclease-1 [Natrinema altunense JCM 12890]
Length = 325
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K+ E RR++R S++ E L R + Q T +
Sbjct: 72 HDITPVMVFDGGPSDLKDDEIESRREQRRSYE----EQLETAREEGDAVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRDLLRLLDVPIVEAPAEGEAQAAHMVKRGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLAQHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|392566068|gb|EIW59244.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 406
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K R +KR+ K E + R++V V
Sbjct: 75 MVENGIKPAYVFDGKPPELKSGVLSKRFEKREEAKEDNEEAKETGTAEDMDRFSRRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ +VAP EA+AQ A L G +ED D L FGA I+Y+
Sbjct: 135 TREHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFGA-PILYR 193
Query: 127 LDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ F + K P L+M +++FT+ +CIL GCDY IKG+G
Sbjct: 194 -----HLTFSEARKTPISEINLQKALEGLEMNMSQFTE-----LCILLGCDYLEPIKGVG 243
Query: 177 LKKA 180
K A
Sbjct: 244 PKSA 247
>gi|323456781|gb|EGB12647.1| hypothetical protein AURANDRAFT_4733, partial [Aureococcus
anophagefferens]
Length = 238
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
++ + LL H ++ + VFDG +P +A +R+ R E L R E
Sbjct: 59 LRRVAKLLYHGVRPVFVFDG-GVPVVKARLIRQRQMRREKNRDDREAASLRR--EMSRSS 115
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + VT M + + R GV +VAP EA+AQ A L AG + V+T+DSD FGA
Sbjct: 116 RDADSVTEDMREDTMHLLRLLGVPYVVAPMEAEAQCAALEAAGLCEGVVTDDSDAFCFGA 175
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLA---KFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++ + F DR+ + + A + +F + +L G DY G+ G+G+
Sbjct: 176 RRVYKNI-------FDDRKYVEAYYASDCARDLRLGRDEFCALALLLGGDYDNGVAGVGV 228
Query: 178 KKA 180
A
Sbjct: 229 VNA 231
>gi|429329613|gb|AFZ81372.1| DNA-repair protein xp-G, putative [Babesia equi]
Length = 839
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ IVAP EA++Q A+LN +G VIT+DSD LVFGA +++ S E+L
Sbjct: 542 GIPYIVAPSEAESQCAHLNESGACYAVITDDSDALVFGANRVLKNFYNSNIFEVYTSERL 601
Query: 142 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
S L + + + I+ GCDY TGIKG+G+ A
Sbjct: 602 FSQLGIGRQELA-----LIAIICGCDYTTGIKGVGIINA 635
>gi|11497880|ref|NP_069102.1| flap endonuclease-1 [Archaeoglobus fulgidus DSM 4304]
gi|28380012|sp|O29975.1|FEN_ARCFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|42543625|pdb|1RXV|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543626|pdb|1RXV|B Chain B, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543629|pdb|1RXW|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|2650376|gb|AAB90967.1| DNA repair protein RAD2 (rad2) [Archaeoglobus fulgidus DSM 4304]
Length = 336
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 30/233 (12%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLI--LDRG-SEAQSHLRQSVDVTH 68
I+ + VFDG K+A E+R+K+R A+A E+ I L G +A+ + + + V
Sbjct: 73 IRPVFVFDGEPPEFKKAEIEERKKRR----AEAEEMWIAALQAGDKDAKKYAQAAGRVDE 128
Query: 69 KMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK------ 122
+ + G+ + AP E +AQ AY+ G +Y ++D D L+FG+ +
Sbjct: 129 YIVDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAKGDVEYTGSQDYDSLLFGSPRLARNLA 188
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
I K L G ++D + L+ L + T + + IL G DY G+KG+G+KKA
Sbjct: 189 ITGKRKLPGKNVYVDVKPEIIILESNLKRLGLTREQLIDIAILVGTDYNEGVKGVGVKKA 248
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+Y I YG I +K K + FL PV D
Sbjct: 249 LNY---------------IKTYGDIFRALKALKVNIDHVEEIRNFFLNPPVTD 286
>gi|410924704|ref|XP_003975821.1| PREDICTED: probable flap endonuclease 1 homolog [Takifugu rubripes]
Length = 297
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L H IK + VFDGR K A E R A++A +R A S R
Sbjct: 62 FLEHDIKPVFVFDGRPPGEKRAVLEKR--------AESAGWRSPNRKGTASSSTR----- 108
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ +Q + GV I AP +A+A A+L G D V +ED D L FGA +I +
Sbjct: 109 ------DCLQLLKLIGVPVIQAPGDAEALCAWLVKEGTVDAVASEDMDTLPFGASILIRQ 162
Query: 127 LDLS--GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L+ G KL L++ +F D +CIL GCDY I G+G K+A
Sbjct: 163 LNSKKDGEVIEYSLSKLLERLQINHQEFVD-----LCILLGCDYCEKICGLGPKRA 213
>gi|118596582|dbj|BAF37950.1| putative flap endonuclease-1 [Sulfolobus sp. Tu A]
gi|118596584|dbj|BAF37951.1| putative flap endonuclease-1 [Sulfolobus sp. Tu B-1]
gi|118596586|dbj|BAF37952.1| putative flap endonuclease-1 [Sulfolobus sp. Sko-3]
gi|118596588|dbj|BAF37953.1| putative flap endonuclease-1 [Sulfolobus sp. Ta]
Length = 304
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH------KAKAAELLILDRGSEAQSHL 60
+L I I VFDG+ P ++A E +RRKK +AK + + SE + +
Sbjct: 21 ILEEGIIPIYVFDGKP-PEQKAQELERRKKVKEEAEKKLEQAKTEGSI---KTSELKKYA 76
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ +T++MA + +A G+ + AP E +A+ AY+NI G + ++D D L+FGA
Sbjct: 77 QMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLLFGA 136
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGC 166
K++I L L+G + KLP L L K T + + I+ G
Sbjct: 137 KRLIRNLTLTG------KRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 167 DYW-TGIKGMGLKKA 180
DY GIKG G+K A
Sbjct: 191 DYNPDGIKGYGVKTA 205
>gi|170593271|ref|XP_001901388.1| Flap endonuclease-1 [Brugia malayi]
gi|317374878|sp|A8QCH0.1|FEN1_BRUMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158591455|gb|EDP30068.1| Flap endonuclease-1, putative [Brugia malayi]
Length = 378
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K + E R ++R + + + + L + ++ V V
Sbjct: 74 MIDNGIKPVYVFDGKPPQMKTSELEKRTERRTEAEKQRNDAVELGDETSVNKFEKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + G+ + AP EA+AQ A L AG ++ED D L FG+ ++ +
Sbjct: 134 TKEQSEEAKRLVTLMGIPVLDAPCEAEAQCAALAKAGKVFATVSEDMDALTFGSPILLRQ 193
Query: 127 LDLSGNCCFMDREKLP-------SALK---MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ S + +KLP LK M + +F D +CIL GCDY + I+G+G
Sbjct: 194 MIAS------EAKKLPVKEMNLNQVLKDFGMNMGQFVD-----LCILLGCDYVSTIRGIG 242
Query: 177 LKKAKDYVFSIMDPDFENALRKIN 200
KKA + + EN L IN
Sbjct: 243 PKKAFELIKKY--ECIENVLETIN 264
>gi|317374937|sp|C5WU23.2|FEN12_SORBI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
Length = 428
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+ + ML A IK + VFDG K+ R KRD + + + +
Sbjct: 98 RTVRMLEA-GIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLNRAIEIGDEDAVEKFSK 156
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYL--NIAGYADYVITEDSDLLVFG 119
++V VT K + + R GV + AP EA+AQ A L N YA V +ED D L FG
Sbjct: 157 RTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYA--VASEDMDSLTFG 214
Query: 120 AKKIIYKL-DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
A++ + L DL D K+ L + + +F D +CILSGCDY IKG+
Sbjct: 215 ARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFID-----LCILSGCDYCENIKGI 269
Query: 176 GLKKA 180
G ++A
Sbjct: 270 GGQRA 274
>gi|118596592|dbj|BAF37955.1| putative flap endonuclease-1 [Sulfolobus sp. NO82]
Length = 304
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 31/195 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH------KAKAAELLILDRGSEAQSHL 60
+L I I VFDG+ P ++A E +RRKK +AKA + + SE + +
Sbjct: 21 ILEEGIIPIYVFDGKP-PEQKAQELERRKKVKEEAEKKLEQAKAEGNI---KTSEFKKYA 76
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ ++++MA + +A G+ + AP E +A+ AY+NI G + ++D D L+FGA
Sbjct: 77 QMSIRLSNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLLFGA 136
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGC 166
K+++ L LSG + KLP L L K T + + I+ G
Sbjct: 137 KRLVRNLTLSG------KRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 167 DYW-TGIKGMGLKKA 180
DY GIKG G+K A
Sbjct: 191 DYNPDGIKGYGVKTA 205
>gi|448355812|ref|ZP_21544561.1| flap endonuclease-1 [Natrialba hulunbeirensis JCM 10989]
gi|445634520|gb|ELY87699.1| flap endonuclease-1 [Natrialba hulunbeirensis JCM 10989]
Length = 325
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ + +MVFDG KE E RR++R +++ E L R + + Q T +
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRREQRQTYE----EQLETAREEGDEVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FG+ +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLFGSPYTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + + L + DA IL G D+ GI G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLAHHDLTLEQLIDA-----AILIGTDFNEGISGIGPKTA 237
>gi|284164367|ref|YP_003402646.1| flap structure-specific endonuclease [Haloterrigena turkmenica DSM
5511]
gi|284014022|gb|ADB59973.1| flap structure-specific endonuclease [Haloterrigena turkmenica DSM
5511]
Length = 325
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ I +MVFDG KE E RR +R +++ E L + R Q + Q T +
Sbjct: 72 NDITPVMVFDGGPSELKEDEIESRRDQRRTYE----EQLEVAREEGDQVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FG+ +
Sbjct: 128 LTPTIQETSRELLRRLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLFGSPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|126465621|ref|YP_001040730.1| flap endonuclease-1 [Staphylothermus marinus F1]
gi|166973707|sp|A3DMG2.1|FEN_STAMF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126014444|gb|ABN69822.1| flap endonuclease 1 [Staphylothermus marinus F1]
Length = 350
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + IK VFDG+ K E RRK R+ K E L A+ + S +
Sbjct: 72 ILENGIKPAYVFDGKPPEIKAKEIEKRRKIREDASKKYEEALRKGDIEAARRYAMMSAKL 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T +M + + A G+ I AP E +AQ AY+ G A ++D D L+FG+ ++I
Sbjct: 132 TDEMVQDAKKLLDAMGIPWIQAPAEGEAQAAYIVSKGDAWASASQDYDSLLFGSPRLIRN 191
Query: 127 LDLSGNCCFMDREKLPS--------------ALKMPLAKFTDAKFRYMCILSGCDYWT-G 171
L +SG + KLP + T + Y+ IL G DY G
Sbjct: 192 LTISG------KRKLPRKNVYIEIKPEIIELKKLLEKLGLTREQLIYVAILIGTDYNPDG 245
Query: 172 IKGMGLKKA 180
+KG+G KKA
Sbjct: 246 VKGIGPKKA 254
>gi|301117906|ref|XP_002906681.1| flap endonuclease 1 [Phytophthora infestans T30-4]
gi|317374909|sp|D0MY34.1|FEN1_PHYIT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|262108030|gb|EEY66082.1| flap endonuclease 1 [Phytophthora infestans T30-4]
Length = 389
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
++ + +K + VFDG+ P ++ E +R R KA E +E ++ V
Sbjct: 80 MMENGLKPVYVFDGKP-PVMKSGELAKRSDRRQEAQKALEEATEKGNAEDIDRFNKRLVR 138
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
T + + + R GV I AP EA+A A L G TED D L FG +
Sbjct: 139 ATPQHNEDCKELLRLMGVPHITAPCEAEASCAALAKGGRVYAAGTEDMDALTFGVPVLYR 198
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAK------FTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+L +S +K+P L++ L + T +F +CIL GCDY I+G+G KK
Sbjct: 199 RLTVS------PAKKIP-ILEIRLERALQELEMTHEQFVDLCILCGCDYCDSIRGVGPKK 251
Query: 180 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS---FHNTNLMFLYQPVYDPVS 236
A Y EN L + G V I E+L + N MF+ V D
Sbjct: 252 A--YAGIKEHKSIENFLEVLQKNKSKG--VVIPDEWLGENPIYKNAREMFIKPEVVDAKE 307
Query: 237 KEVVPLNPLESEMRDEVFSQLSLKE 261
E+ +P E+E+ D + + +E
Sbjct: 308 TEIKWRDPQETELVDFLVKKHGFQE 332
>gi|323454359|gb|EGB10229.1| hypothetical protein AURANDRAFT_53007 [Aureococcus anophagefferens]
Length = 538
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS---EAQS 58
+ + ML A K + VFDG K T + R + + + + K A D G+ E
Sbjct: 72 RTLRMLEAG-AKPVFVFDGAAPELKGKTLKGRSEAKRAAEEKLARARDADSGATTEEVYK 130
Query: 59 HLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
S VT + +V + R GV + AP EA+A L G D+V+TED D L F
Sbjct: 131 AASASTRVTRQHNDDVKRLLRLMGVPVVEAPGEAEASCVALVRHGACDFVVTEDMDALTF 190
Query: 119 GAKKIIYKL-DLSGNCCFMDREK----LPSALK--MPLAKFTDAKFRYMCILSGCDYWTG 171
GA K++ L D+ G R L +AL+ P T A F CIL GCDY
Sbjct: 191 GAAKMVKNLFDVEGARAKEKRPAYEIDLAAALRELGPRGLGTMAAFVDFCILCGCDYLDH 250
Query: 172 IKGMG 176
+ G+G
Sbjct: 251 VPGVG 255
>gi|402580560|gb|EJW74510.1| hypothetical protein WUBG_14580, partial [Wuchereria bancrofti]
Length = 266
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAK----AAELLILDRGSEAQSHL-- 60
++ + IK + VFDG+ P +A+E ++R +R + K A EL G EA +
Sbjct: 74 MIDNGIKPVYVFDGKP-PQMKASELEKRTERRTEAEKQRNDAVEL-----GDEASVNKFE 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + + G+ + AP EA+AQ A L AG ++ED D L FG+
Sbjct: 128 RRLVKVTKEQNEEAKRLVTLMGIPILDAPCEAEAQCAALAKAGKVFATVSEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLP-------SALK---MPLAKFTDAKFRYMCILSGCDYWT 170
++ ++ S + +KLP LK M + +F D +CIL GCDY +
Sbjct: 188 PILLRQMIAS------EAKKLPVKEMNLNQVLKDFGMNMGQFVD-----LCILLGCDYVS 236
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKIN 200
I+G+G KKA + + EN L IN
Sbjct: 237 TIRGIGPKKAFELIKKY--ECIENVLEAIN 264
>gi|148508143|gb|ABQ75935.1| flap structure-specific endonuclease [uncultured haloarchaeon]
Length = 337
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 36/264 (13%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSE-AQSHLRQSVDVTH 68
H + + VFDG K+ ++RR R+ +A + +RG E A S L T
Sbjct: 84 HDLTPVFVFDGGVTELKDEEVQERRVARE--EAVELQAAAEERGDELAASRLEAR---TQ 138
Query: 69 KMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++ + + R V I AP E +AQ A + I G DYV +ED D L+FGA +
Sbjct: 139 RLTETIHETTRGLLNRLDVPIIEAPAEGEAQAAEMAIRGDVDYVGSEDYDTLLFGAPYTV 198
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+L G+ MD L + LK T + + IL G D+ GI G+G
Sbjct: 199 RQLTSKGDPELMD---LQTTLKNQ--NLTREQLVDVAILCGTDFNDGISGIGPA------ 247
Query: 185 FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNP 244
A+ IN +G + S + EF+ +FL PV + + +NP
Sbjct: 248 ---------TAISAINDHGDLWSVLDARDEFIQHADRVRSLFLDPPVTNEYTLHTA-INP 297
Query: 245 LESEMRDEVFSQLSLKELELPKDQ 268
R V + + E+P D+
Sbjct: 298 DMDAARSYV-----VDDWEVPADE 316
>gi|196004300|ref|XP_002112017.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
gi|317376198|sp|B3RVF0.1|FEN1_TRIAD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190585916|gb|EDV25984.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
Length = 377
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K R+++R+ + +A+E R++V +
Sbjct: 74 MMENGIKPVYVFDGKPPRLKSGELARRQERREEAQKQASEAEKEGDADNIDKFTRRTVRM 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + GV + AP EA++Q A L AG TED D L FG+ ++
Sbjct: 134 TPEHCEEGKKLLKLMGVPVVQAPCEAESQCAALVKAGKVYATGTEDMDALTFGSNVMLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAK-----------FTDAKFRYMCILSGCDYWTGIKGM 175
L S A KMP+ + F+ +F +CIL GCDY IKG+
Sbjct: 194 LTFS------------EARKMPIQEFHLKNALQELNFSMEQFIDLCILLGCDYCDSIKGV 241
Query: 176 GLKKA 180
G K+A
Sbjct: 242 GPKRA 246
>gi|71029044|ref|XP_764165.1| DNA repair protein Rad2 [Theileria parva strain Muguga]
gi|68351119|gb|EAN31882.1| DNA repair protein rad2, putative [Theileria parva]
Length = 835
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 62 QSVDVTHKMAL--NVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
QSV VTHK +V + GV IVAP EA++Q AY+N +G VI++DSD LVFG
Sbjct: 517 QSVSVTHKNPYYDDVHKLLEHFGVPYIVAPSEAESQCAYMNRSGKCYAVISDDSDSLVFG 576
Query: 120 AKKIIYKL--DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
AK ++ D +DR + + + + I+ GCDY TG+KG+G+
Sbjct: 577 AKCLLKNFYNDKVFELYTLDRIRRELGIGR-------KQLALIAIICGCDYTTGVKGIGI 629
Query: 178 KKAKDYV--FSIMDP--DFEN-ALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
A + + + D DF + A N+ + I K + + N + + + P +
Sbjct: 630 VNALEVIKAYPTFDDLYDFRDWATNDCNLKSAVADECPIRKSYKIAHINYRVNWTFSPDF 689
Query: 233 DPVSKEVVPLNP 244
+ LNP
Sbjct: 690 PNREAYNMFLNP 701
>gi|255513611|gb|EET89877.1| XPG I domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 352
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+A + ++ VFDG K+ T E R +R+ + + + E + + S +
Sbjct: 71 LIAKGVNLVYVFDGMPSTLKKKTIEARISRREKAYEAWQKAVAEGQAEEVRKFAQASTRI 130
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T ++ + + G+ I AP E +AQ +Y+ G A ++D D L+FG+KK++
Sbjct: 131 TKEIVSSAKELLGYMGIWYINAPSEGEAQASYMCSKGIAYAAASQDYDTLLFGSKKVVRN 190
Query: 127 LDLSGNCCFMDREKLPSA------------LKMPLAKF--TDAKFRYMCILSGCDYWTGI 172
L LSG R KLP L L T K ++ IL G D+ G+
Sbjct: 191 LTLSG------RRKLPGKNVFVNVNPEMVDLDATLGSLGITRQKLIWIGILLGTDFNDGV 244
Query: 173 KGMGLKKA 180
KG+G K A
Sbjct: 245 KGVGPKTA 252
>gi|389852752|ref|YP_006354986.1| flap endonuclease-1 [Pyrococcus sp. ST04]
gi|388250058|gb|AFK22911.1| flap endonuclease-1 [Pyrococcus sp. ST04]
Length = 341
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK VFDG+ K+ E R++ R+ + K E L EA+ + +++ V
Sbjct: 68 LMEAGIKPAYVFDGKPPEFKKRELEKRKEAREEAEIKWKEALAKGDIEEARKYAQRATRV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + G+ I AP E +AQ AY+ G ++D D L+FGA +++
Sbjct: 128 NEMLIEDAKKLLELMGIPVIQAPSEGEAQAAYMASKGKVYASASQDYDSLLFGAPRLVRN 187
Query: 127 LDLSGNCCFMDREKLPSA-----LKMPLA---------KFTDAKFRYMCILSGCDYW-TG 171
L ++G + KLP +K L K T K + IL G DY G
Sbjct: 188 LTITG------KRKLPGKNIYVEIKPELIVLDEVLSSLKLTREKLIELAILVGTDYNPGG 241
Query: 172 IKGMGLKKAKDYVFSIMDP 190
IKG+G KKA + V DP
Sbjct: 242 IKGIGPKKALEIVRHSKDP 260
>gi|312137188|ref|YP_004004525.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
gi|311224907|gb|ADP77763.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
Length = 327
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ + IK + VFDG+ L K T +R + R + + E L +A+ + ++ +
Sbjct: 68 LVENNIKPVYVFDGKSLALKSETISERTRMRLEAEKRWKEALKKKDLEKARKYASRASRI 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ ++ + + A G+ I AP E +AQ YL G A V ++D D L+FGA ++I
Sbjct: 128 SKEIIESSKELLDAMGIPYIQAPNEGEAQAVYLVKNGDAWAVASQDYDCLLFGAPRVIRN 187
Query: 127 LDLSG--NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
L +S N ++ +K+ L + + D + +L G D+ G+KG+G K+ + +
Sbjct: 188 LAISSDINLELLELDKILKKLGISREQLID-----IALLVGTDFNPGVKGIGAKRGLELI 242
>gi|118596590|dbj|BAF37954.1| putative flap endonuclease-1 [Sulfolobus sp. M02]
Length = 304
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH------KAKAAELLILDRGSEAQSHL 60
+L I I VFDG+ P ++A E +RRKK +AK + + SE + +
Sbjct: 21 ILEEGIIPIYVFDGKP-PEQKAQELERRKKVKEEAEKKLEQAKTEGSI---KTSELKKYA 76
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ +T++MA + +A G+ + AP E +A+ AY+NI G + ++D D L+FGA
Sbjct: 77 QMSIKLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLLFGA 136
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGC 166
K+++ L L+G + KLP L L K T + + I+ G
Sbjct: 137 KRLVRNLTLTG------KRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 167 DYW-TGIKGMGLKKA 180
DY GIKG G+K A
Sbjct: 191 DYNPDGIKGYGVKTA 205
>gi|221508520|gb|EEE34089.1| DNA-repair protein xp-G, putative [Toxoplasma gondii VEG]
Length = 2004
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 18/127 (14%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q+ ++T +M VI RA GV I AP EA+A AYL AD VI++DSD LVFGA
Sbjct: 1416 QQTGNITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVFGA 1475
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIK 173
++I F + +K +++M A F K + +L GCDY G+K
Sbjct: 1476 REIYRN--------FFENKK---SVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVK 1524
Query: 174 GMGLKKA 180
G+G+ A
Sbjct: 1525 GIGIVNA 1531
>gi|237832503|ref|XP_002365549.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
gi|211963213|gb|EEA98408.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
Length = 2004
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 18/127 (14%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q+ ++T +M VI RA GV I AP EA+A AYL AD VI++DSD LVFGA
Sbjct: 1416 QQTGNITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVFGA 1475
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIK 173
++I F + +K +++M A F K + +L GCDY G+K
Sbjct: 1476 REIYRN--------FFENKK---SVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVK 1524
Query: 174 GMGLKKA 180
G+G+ A
Sbjct: 1525 GIGIVNA 1531
>gi|221487998|gb|EEE26212.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2004
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 18/127 (14%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q+ ++T +M VI RA GV I AP EA+A AYL AD VI++DSD LVFGA
Sbjct: 1416 QQTGNITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVFGA 1475
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIK 173
++I F + +K +++M A F K + +L GCDY G+K
Sbjct: 1476 REIYRN--------FFENKK---SVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVK 1524
Query: 174 GMGLKKA 180
G+G+ A
Sbjct: 1525 GIGIVNA 1531
>gi|340506781|gb|EGR32852.1| hypothetical protein IMG5_068750 [Ichthyophthirius multifiliis]
Length = 348
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 6 MLLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLR 61
ML+ IK +FDG+ + E T+ + K K KAA LD G EA +
Sbjct: 77 MLIDSGIKPAWIFDGKPPEFKSGELTKRQKAKANALEKQKAA----LDIGDMEEALKMEQ 132
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+++ +T M + I+ + GV I AP EA+AQ A L A +TED D L FG
Sbjct: 133 RNLFITKDMKNDAIKMLQLLGVPVIQAPCEAEAQCAALTKAKKVFATVTEDMDALTFGTP 192
Query: 122 KIIYKLDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
++ L+ +D + L++ +F D +CIL GCDY I G+G
Sbjct: 193 TLLRGLNSKKEPIIEIDYNLMLQELELTQEQFVD-----LCILCGCDYLVRIDGIG 243
>gi|433637770|ref|YP_007283530.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
gi|433289574|gb|AGB15397.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
Length = 326
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K E RR++R+S++ E L + R Q + Q T +
Sbjct: 73 HDIVPVMVFDGGPSELKTDEIESRREQRESYE----EQLEVAREEGDQVAIAQLESYTQR 128
Query: 70 MALNVIQACRA--RGVDCIV--APFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D V AP E +AQ A + G ADYV +ED D L+FG+ + +
Sbjct: 129 LTPTIQETSRELLRLLDVPVVEAPAEGEAQAANIVRNGDADYVGSEDYDALLFGSPRTLR 188
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD + + L + D + I+ G D+ G+ G+G K A
Sbjct: 189 QLTSKGDPELMDLQATLDDHDLTLEQLID-----VAIMIGTDFNDGVDGIGPKTA 238
>gi|330797354|ref|XP_003286726.1| hypothetical protein DICPUDRAFT_31355 [Dictyostelium purpureum]
gi|325083324|gb|EGC36780.1| hypothetical protein DICPUDRAFT_31355 [Dictyostelium purpureum]
Length = 383
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L++ IK I VFDG+ K R+ KR E + + Q ++++ V
Sbjct: 75 LISKGIKPIYVFDGKPPTLKSGELAKRQAKRKEATDSLKEATEVGTSEDVQKFAKRTISV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ K I+ GV + AP EA+AQ A + +G A +ED D L G+ ++ +
Sbjct: 135 SRKQNEECIKLLTLMGVPVVKAPCEAEAQCAEIVKSGKAWATGSEDMDSLTLGSTVLLRR 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A KMP+ +F T +F + IL GCDY IKG+
Sbjct: 195 LFFS------------EAKKMPILEFELPSVLEGLGLTYEEFIDLGILLGCDYCDSIKGI 242
Query: 176 GLKKA 180
G K+A
Sbjct: 243 GPKRA 247
>gi|159118360|ref|XP_001709399.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
gi|317374902|sp|A8B672.1|FEN1_GIAIC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157437515|gb|EDO81725.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
Length = 361
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDS---HKAKAAELLILDRGSEAQSHLRQSVDVTH 68
IK I VFDG+ K+ E RR+ R++ + KA E L+R A+ R++V VT
Sbjct: 80 IKPIFVFDGKPPEDKQGELEKRRQAREAAELEQQKAEEEGNLER---AKQLSRRTVKVTQ 136
Query: 69 KMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
+ + G+ +VA EA+AQ + + V + D D+L FG+ +I L
Sbjct: 137 QHCKQAERLLDTLGIPYVVAAGEAEAQCVAMAKERVCEGVASSDLDVLAFGSPCLIRNLA 196
Query: 129 LSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
G DRE + L L + F+ +F +CIL GCDY ++G+G K A
Sbjct: 197 QGG-----DREIVEINLNTVLKELGFSYDEFLDLCILCGCDYANSLEGIGPKTA 245
>gi|41614884|ref|NP_963382.1| flap endonuclease-1 [Nanoarchaeum equitans Kin4-M]
gi|48427872|sp|P61942.1|FEN_NANEQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40068608|gb|AAR38943.1| NEQ088 [Nanoarchaeum equitans Kin4-M]
Length = 339
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL + IK I VFDG K E R+K ++ ++K E L EA + + +
Sbjct: 69 LLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQEAIKYAKSLGKL 128
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
M + A G+ + AP E +A+ AYL G +DY ++D D L+FG+ +++
Sbjct: 129 DSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDSLLFGSPRVVRN 188
Query: 127 LDLS------GNCCFMDREKLPSALKMPLA----KFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +S G +++ + P +++ K T + + +L G DY + G+G
Sbjct: 189 ITISEKRKLPGKNIYVEVK--PEVIELEAVLNYWKITREQLIAIAMLLGTDYNEKVPGIG 246
Query: 177 LKKAKDYVFSIMDP 190
K A + V DP
Sbjct: 247 PKTAIEIVKRFGDP 260
>gi|146302997|ref|YP_001190313.1| flap endonuclease-1 [Metallosphaera sedula DSM 5348]
gi|145701247|gb|ABP94389.1| flap endonuclease 1 [Metallosphaera sedula DSM 5348]
Length = 300
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL I I VFDG+ K E+RRK ++ + K + + E + + + + +
Sbjct: 21 LLEEGIIPIYVFDGKPPELKAQELENRRKMKEEAEKKLEKAKESGKVEEMRKYSQMTSRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T MA + GV + AP E +A+ AYLN G ++D D L+FGA+K+I
Sbjct: 81 TTDMAKESKELLEYMGVPTVQAPSEGEAEAAYLNAKGITYASASQDYDSLLFGAEKLIRN 140
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L +SG ++ E + +A + + T + + IL G DY G++G+G
Sbjct: 141 LTISGKRKLPNKDVYVEVKPELIETASLLKKLEITREQLIDIAILVGTDYNPDGVRGIGP 200
Query: 178 KKA 180
KKA
Sbjct: 201 KKA 203
>gi|448374758|ref|ZP_21558548.1| flap endonuclease-1 [Halovivax asiaticus JCM 14624]
gi|445659884|gb|ELZ12686.1| flap endonuclease-1 [Halovivax asiaticus JCM 14624]
Length = 326
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K E RR++R+S++ E L + R Q + Q T +
Sbjct: 73 HDIVPVMVFDGGPSDLKTDEIESRREQRESYE----EQLEVAREEGDQVAIAQLESYTQR 128
Query: 70 MALNVIQACRA--RGVDCIV--APFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D V AP E +AQ A + G ADYV +ED D L+FG+ + +
Sbjct: 129 LTPTIQETSRELLRFLDVPVVEAPAEGEAQAANIVRNGDADYVGSEDYDALLFGSPRTLR 188
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD + + L + D + I+ G D+ G+ G+G K A
Sbjct: 189 QLTSKGDPELMDLQATLDDHDLTLEQLID-----VAIMIGTDFNHGVDGVGPKTA 238
>gi|448310824|ref|ZP_21500603.1| flap endonuclease-1 [Natronolimnobius innermongolicus JCM 12255]
gi|445607172|gb|ELY61065.1| flap endonuclease-1 [Natronolimnobius innermongolicus JCM 12255]
Length = 325
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ I +MVFDG K+ E RR++R S++A+ L R + Q T +
Sbjct: 72 NDITPVMVFDGGPSELKDDEIESRREQRRSYEAQ----LETAREEGDAVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E ++ L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLERHELTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|367004070|ref|XP_003686768.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
gi|357525070|emb|CCE64334.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
Length = 1051
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT M +V + G+ IVAP EA+AQ A L D +IT+DSD+ +FG
Sbjct: 781 RDSDEVTQDMIKSVQELLTRFGIPYIVAPMEAEAQCAELLKLKLVDGIITDDSDVFLFGG 840
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
K+ + N F D++KL L + + D + +L G DY +GIKG+G
Sbjct: 841 SKVYKNMFHEKNYVEFYDQDKLTVQLGLERSNLID-----LALLLGSDYTSGIKGIG 892
>gi|448327893|ref|ZP_21517213.1| flap endonuclease-1 [Natrinema versiforme JCM 10478]
gi|445617013|gb|ELY70619.1| flap endonuclease-1 [Natrinema versiforme JCM 10478]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K+ E RR++R S++ E L R + Q T +
Sbjct: 72 HDITPVMVFDGGPSELKDDEIESRREQRRSYE----EQLETAREEGDSVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FG+ +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVKRGDADYVGSEDYDALLFGSPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLAHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|145546103|ref|XP_001458735.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426556|emb|CAK91338.1| unnamed protein product [Paramecium tetraurelia]
Length = 872
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK-LDLSGNCCFMDREK 140
G+ I+AP EA+AQ AYL G D VITEDSD+ +FGA K++ + + + D +
Sbjct: 573 GIPWIIAPGEAEAQCAYLQQNGLVDCVITEDSDVFLFGATKVLKGFFESKTSLVYYDTQY 632
Query: 141 LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+ L + + Y+ + G DY GIKG+G+ A + V
Sbjct: 633 IKEDLGLNRDQLI-----YLALFLGSDYTLGIKGVGIVNAMEIV 671
>gi|320165003|gb|EFW41902.1| flap endonuclease 1-B [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
+L + IK + VFDG+ K R +R+ +A LD +EA +
Sbjct: 74 MLENGIKPVYVFDGKPPVMKSGELAKRTARREEAQAS------LDAATEAGESETMEKFQ 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + + GV I AP EA+AQ A L +G TED D L FG+
Sbjct: 128 RRLVKVTKEHNEECKRLLTLMGVPYISAPCEAEAQCAALVKSGSVFAAGTEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWT 170
K ++ L F + K+P LK+ + +F D +CIL GCDY
Sbjct: 188 KVLLRHL------TFSEARKMPIKEFNLDRALEGLKLTMEQFVD-----LCILLGCDYCE 236
Query: 171 GIKGMGLKKA 180
IKG+G +A
Sbjct: 237 SIKGIGPTRA 246
>gi|448713770|ref|ZP_21702055.1| flap endonuclease-1 [Halobiforma nitratireducens JCM 10879]
gi|445789178|gb|EMA39869.1| flap endonuclease-1 [Halobiforma nitratireducens JCM 10879]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ + +MVFDG KE E RR++R +++ E L R + + Q T +
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRREQRRTYE----EQLETAREEGDEVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLEKHDLTLEQLIDA-----AILIGTDFNDGVSGIGPKTA 237
>gi|432927428|ref|XP_004081007.1| PREDICTED: flap endonuclease 1-like [Oryzias latipes]
Length = 380
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L H IK + VFDG+ K + E R ++R + A+ + + ++ V V
Sbjct: 74 MLEHGIKPVYVFDGKPPQLKSSELEKRGERRAEAEKLLAQAQEMGEQENVEKFTKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + GV I AP EA+A A L G TED D L FG ++
Sbjct: 134 TKQHNDECKKLLSLMGVPYIEAPCEAEASCAALVKEGKVFATATEDMDGLTFGTNVLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K+P+ +F T +F +CIL GCDY IKG+
Sbjct: 194 LTAS------------EAKKLPIQEFHFNRILQDMDLTKEQFIDLCILLGCDYCGTIKGI 241
Query: 176 GLKKAKDYV 184
G K+A D +
Sbjct: 242 GPKRAVDLI 250
>gi|448592407|ref|ZP_21651514.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
gi|445731412|gb|ELZ82996.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
Length = 326
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H + + VFDG K+ RR++R+ +A+ E EA ++ +T
Sbjct: 73 HDLTPVFVFDGGVTEMKDDEVAKRREQREKAEARLEEAREAGDAVEAARMEARTQRLTDT 132
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
+ + R V + AP E +AQ +Y+ G ADYV +ED D L+FGA + +L
Sbjct: 133 IQETSRELLRLLDVPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYTLRQLTS 192
Query: 130 SGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
GN MD + + + D + +L G D+ GI G+G K A
Sbjct: 193 KGNPELMDLDATLDKHDITWEQLVD-----IAMLCGTDFNEGISGVGPKTA 238
>gi|383622569|ref|ZP_09948975.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
gi|448694526|ref|ZP_21697026.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
gi|445785111|gb|EMA35906.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ + +MVFDG K E RR++R S++ E L R + + Q T +
Sbjct: 72 NDVTPVMVFDGGPSELKADEIESRREQRRSYE----EQLETAREEGDEVAIAQLESRTQR 127
Query: 70 MALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R V + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLRLFDVPIVEAPAEGEAQAAHMVRHGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L GN MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGNPELMDLEATLEEHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|15669635|ref|NP_248448.1| flap endonuclease-1 [Methanocaldococcus jannaschii DSM 2661]
gi|17432937|sp|Q58839.1|FEN_METJA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157829719|pdb|1A76|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
gi|157829720|pdb|1A77|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
gi|1592090|gb|AAB99454.1| DNA repair protein RAD2 (rad2) [Methanocaldococcus jannaschii DSM
2661]
Length = 326
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K IH LL + I I VFDG KE T + RR+ ++ + K E + + EA + +
Sbjct: 64 KTIH-LLENDITPIWVFDGEPPKLKEKTRKVRREMKEKAELKMKEAIKKEDFEEAAKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ +T KM N G+ + AP E +AQ +Y+ G V+++D D L++GA
Sbjct: 123 RVSYLTPKMVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYGAP 182
Query: 122 KIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
+++ L + ++ ++ L++ L D + I G DY G+KG+G K+
Sbjct: 183 RVVRNLTTTKEMPELIELNEVLEDLRISLDDLID-----IAIFMGTDYNPGGVKGIGFKR 237
Query: 180 AKDYVFS 186
A + V S
Sbjct: 238 AYELVRS 244
>gi|14520948|ref|NP_126423.1| flap endonuclease-1 [Pyrococcus abyssi GE5]
gi|28380024|sp|Q9V0P9.1|FEN_PYRAB RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|5458165|emb|CAB49654.1| fen1 FLAP endonuclease-1 [Pyrococcus abyssi GE5]
gi|380741502|tpe|CCE70136.1| TPA: flap endonuclease-1 [Pyrococcus abyssi GE5]
Length = 343
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K+ E RR+ R+ + K E L EA+ + +++ V
Sbjct: 68 LMEAGIKPVYVFDGKPPAFKKKELEKRREAREEAEIKWKEALAKGDIEEARKYAQRATKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ + AP E +AQ AY+ G ++D D L+FG +++
Sbjct: 128 NEMLIEDAKKLLQLMGIPIVQAPSEGEAQAAYMAGKGDVYASASQDYDSLLFGTPRLVRN 187
Query: 127 LDLSGNCCFMDREKLPSA-----LKMPLA---------KFTDAKFRYMCILSGCDYW-TG 171
L ++G + K+P +K L K T K + IL G DY G
Sbjct: 188 LTITG------KRKMPGKDIYVEIKPELIVLEEVLKELKITREKLIELAILVGTDYNPGG 241
Query: 172 IKGMGLKKAKDYVFSIMDP 190
IKG+G KKA + V DP
Sbjct: 242 IKGIGPKKALEIVKYSKDP 260
>gi|448397895|ref|ZP_21569833.1| flap endonuclease-1 [Haloterrigena limicola JCM 13563]
gi|445672111|gb|ELZ24688.1| flap endonuclease-1 [Haloterrigena limicola JCM 13563]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ + +MVFDG K+ E RR++R S++ E L R + Q T +
Sbjct: 72 NDVTPVMVFDGGPSELKDDEIESRREQRRSYE----EQLETAREEGDAVAVAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA + +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMAKRGDADYVGSEDYDALLFGAPRTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|323457006|gb|EGB12872.1| hypothetical protein AURANDRAFT_19112 [Aureococcus anophagefferens]
Length = 396
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL ++ + VFDG+ K R KR +A + D + V
Sbjct: 80 LLQAGVRPVYVFDGKPPNMKGGELAKRTAKRQEAEAALKKATENDDAEGISKYSALLTKV 139
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ K +V Q R GV + AP EA+AQ A L G A V TED D L FG+ + +
Sbjct: 140 SRKDCDDVKQLLRLMGVPVVDAPCEAEAQCAELVRGGKAHAVGTEDMDALTFGSTRQLR- 198
Query: 127 LDLSGNCCFMDREKLPSALKMPLA------KFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
N F + K L++ A ++A+F CIL GCDY + I+G+G K A
Sbjct: 199 -----NMTFTKKSKDDKVLEITHAAVLEGLGLSNAEFVDFCILCGCDYTSTIRGVGPKTA 253
>gi|343172070|gb|AEL98739.1| endonuclease, partial [Silene latifolia]
gi|343172072|gb|AEL98740.1| endonuclease, partial [Silene latifolia]
Length = 325
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGSEA--QSHLRQ 62
LL IK + VFDG+ K+ KR S +A A E L ++ G + + ++
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKK----QELAKRYSKRADATEDLSAAIEEGDKEGIEKFSKR 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT + + + GV + AP EA+AQ A L G V +ED D L FGA K
Sbjct: 131 TVKVTKQHNEDCKKLLGLMGVPVVEAPSEAEAQCAALCKNGKVYAVASEDMDSLTFGACK 190
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTG 171
+ L MD PS+ K+P+ +F AK F +CILSGCDY
Sbjct: 191 FLRHL--------MD----PSSKKIPVMEFDMAKVLEELNLTMDQFIDLCILSGCDYCDN 238
Query: 172 IKGMG 176
IKG+G
Sbjct: 239 IKGIG 243
>gi|413932541|gb|AFW67092.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 411
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+ I ML A IK + VFDG K+ R KRD + + + + +
Sbjct: 71 RTIRMLEA-GIKPVFVFDGEPPEMKKKELAKRSLKRDDAIKDLNRAMEIGDENAIEKFSK 129
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYL--NIAGYADYVITEDSDLLVFG 119
++V VT + + + R GV + AP EA+AQ A L N YA V +ED D L FG
Sbjct: 130 RTVKVTGRHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYA--VASEDMDTLTFG 187
Query: 120 AKKIIYKLDLSG----NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
A++ + L G D K+ L + + +F D +CILSGCDY I+G+
Sbjct: 188 ARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFID-----LCILSGCDYCENIRGI 242
Query: 176 GLKKA 180
G ++A
Sbjct: 243 GGQRA 247
>gi|317374922|sp|Q013G9.2|FEN1_OSTTA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 389
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ ML A IK + VFDG+ K R+ KR+ +A E +
Sbjct: 70 MRTSRMLEAG-IKPVYVFDGKPPTMKGGELAKRKDKREEAEAALKAAREAGNQEEVEKLS 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V V+ + ++ V++ + G+ AP EA+A A + AG V TED D L F A
Sbjct: 129 KRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAGLVWAVGTEDMDTLTFAA 188
Query: 121 KKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
++ L D EK + L + +F D +CIL GCDY I+G+G
Sbjct: 189 PRVARNLMAPKSAEKPVLEFDYEKTIAGLGLTADQFID-----LCILCGCDYTDTIRGVG 243
Query: 177 LKKA 180
K A
Sbjct: 244 PKTA 247
>gi|406699511|gb|EKD02713.1| exonuclease [Trichosporon asahii var. asahii CBS 8904]
Length = 323
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 26/180 (14%)
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI------------LSGCDYWTGIKG 174
+D GNC ++ R + + +P+ +TD +FR M + LSGCDY I G
Sbjct: 1 MDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYLPSIVG 60
Query: 175 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDP 234
+GLKKA + + E ++ I + G+++ + ++ +F+ L FL+Q VY P
Sbjct: 61 IGLKKAHRLLRRLK--TVERVIQSIRLD---GAHL-VPDGYIEAFNQAELAFLHQRVYCP 114
Query: 235 VSKEVVPLNPLES---EMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
K +VPL + DE + L ++ + A +ALG+L P S + ++ P+
Sbjct: 115 HEKRLVPLCEFPASGLSGDDEKWIGLDVEPM-----VAQGMALGDLHPESRKPIEDLWPN 169
>gi|156093896|ref|XP_001612986.1| DNA repair endonuclease [Plasmodium vivax Sal-1]
gi|148801860|gb|EDL43259.1| DNA repair endonuclease, putative [Plasmodium vivax]
Length = 1473
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 30/197 (15%)
Query: 18 FDGRHLPAKE---ATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL--------RQSVDV 66
+G HL + +DR RDS A LDR + HL + ++++
Sbjct: 1075 LNGGHLTGESLDGPPPDDRPHLRDSRALDA----YLDRTNRENEHLMKEYKKLKKNNIEI 1130
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+M ++ G+ + +P EA+AQ +YLN Y D +I++DSD+LVF K +I
Sbjct: 1131 NEEMNEDIKILLNMFGIPYVQSPCEAEAQCSYLNCKNYCDAIISDDSDVLVFNGKTVIKN 1190
Query: 127 LDLSGNCCFMDREKLPSALKMPLAK----FTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
F +R+K + L + + + +L GCDY G+ G+G+ A +
Sbjct: 1191 --------FFNRKKTVEVYERKLIEDKLGLYQDELINLSLLCGCDYTIGVHGVGIVNALE 1242
Query: 183 YVFSIMDPDFENALRKI 199
+ + P FE+ L+K+
Sbjct: 1243 IIKAF--PTFED-LKKL 1256
>gi|403358237|gb|EJY78757.1| Flap endonuclease 1-1 [Oxytricha trifallax]
Length = 967
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLRQSV 64
L IK I VFDG+ K + R++ ++ KA + ++ G A+ +SV
Sbjct: 79 FLESGIKPIWVFDGKPPDLKNRVLDQRKETKE--KAVEEKKNRIEEGDMEGAKRMAGRSV 136
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT M + + R G I AP EA+AQ A+L G A +ED D L FG K ++
Sbjct: 137 KVTWDMMRDAKKLLRLMGCPVIDAPGEAEAQCAHLVKLGLAFATASEDMDSLTFGTKVLL 196
Query: 125 YKLDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ +D E++ M +F D +CIL GCDY T I G+G KA Y
Sbjct: 197 RGFNSKKEPIIQIDLEEVLEGFMMNHDQFID-----LCILCGCDYTTSITGIGPIKAYQY 251
Query: 184 VFSIMDPDFENALRKI 199
+ S EN ++K+
Sbjct: 252 L-SEHGGIIENVIKKV 266
>gi|193659550|ref|XP_001944971.1| PREDICTED: flap endonuclease 1 [Acyrthosiphon pisum]
Length = 380
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL------ 60
LL + IK + VFDG+ P +++E ++R R K+ L++ EA
Sbjct: 74 LLENGIKPVYVFDGKP-PQMKSSELEKRADRRQEAQKS-----LEKAEEAGDATGIDKFS 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ V VT + + GV + AP EA+AQ A + AG TED D L FG+
Sbjct: 128 KRLVKVTSTHTTECKELLKLMGVPFVEAPCEAEAQCAAMVKAGKVYATATEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ + S A KMP+ +F + +F +CIL GCDY
Sbjct: 188 PVLLRHMTFS------------EARKMPIQEFQLDSVLETMEMSRDEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKA 180
IKG+G K+A
Sbjct: 236 NSIKGVGPKRA 246
>gi|336255103|ref|YP_004598210.1| Flap structure-specific endonuclease [Halopiger xanaduensis SH-6]
gi|335339092|gb|AEH38331.1| Flap structure-specific endonuclease [Halopiger xanaduensis SH-6]
Length = 325
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
+ + +MVFDG KE E RR +R +++ E L R + + Q T +
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRRDQRRTYE----EQLETAREEGDEVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHIVRRGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD E + + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMDLEATLAHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|156553807|ref|XP_001603401.1| PREDICTED: flap endonuclease 1-like [Nasonia vitripennis]
Length = 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQ 62
L+ + IK + VFDG+ L E + R++ + +AAE + G+ + R+
Sbjct: 74 LVENGIKPVYVFDGKPPTLKGGELAKRAERREEAQKQLQAAE----EAGNVEDVDKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + Q G+ I AP EA+AQ A + +G TED D L FG
Sbjct: 130 LVKVTKQHGEEAKQLLTLMGIPFIDAPCEAEAQCAAMVKSGKVYATATEDMDALTFGCNV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAK-----------FTDAKFRYMCILSGCDYWTG 171
++ +L S A KMP+ + T +F +CI+ GCDY T
Sbjct: 190 LLRRLTFS------------EARKMPIQEIQYDKVLNGLGLTRDEFIDLCIMLGCDYTTS 237
Query: 172 IKGMGLKKAKDYV 184
IKG+G K+A + +
Sbjct: 238 IKGVGPKRAIELI 250
>gi|170291015|ref|YP_001737831.1| flap endonuclease-1 [Candidatus Korarchaeum cryptofilum OPF8]
gi|226700953|sp|B1L6R9.1|FEN_KORCO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|170175095|gb|ACB08148.1| XPG I domain protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 342
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L I I VFDG K E+R + R+ + K E L + EA+ + + ++++
Sbjct: 69 FLKEGIIPIYVFDGEKPSFKSRAIEERVRAREEAELKWKEALEIGDLEEARKYAQAALNI 128
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + GV + AP E +AQ A++ + G ++D D L+FGA ++I
Sbjct: 129 TGDIVEDCKTILKLMGVPIVQAPSEGEAQAAHMAMKGDVWATASQDYDSLLFGAPRLIRN 188
Query: 127 LDLSGNCCFMDRE----------KLPSALKMPLAKFTDAKFRYMCILSGCDY-WTGIKGM 175
L ++G +E +L S LK + + + IL G DY G+KG+
Sbjct: 189 LTITGKRKLPGKEVYVDINPELIELESVLKR--NGISREQLIMIGILVGTDYNLGGVKGI 246
Query: 176 GLKKAKDYV 184
G+K+A + V
Sbjct: 247 GVKRALELV 255
>gi|148642785|ref|YP_001273298.1| flap endonuclease-1 [Methanobrevibacter smithii ATCC 35061]
gi|166973703|sp|A5UL52.1|FEN_METS3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148551802|gb|ABQ86930.1| DNA repair flap structure-specific 5'-3' endonuclease
[Methanobrevibacter smithii ATCC 35061]
Length = 327
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ IK I VFDG K+ T + RR+ R+ + K E L EA+ + +S +
Sbjct: 68 MIEKDIKPIYVFDGTPSYLKQETIDQRRQTREESEKKWKEALAKQDTQEARKYAMRSSKL 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ I A E +AQ AYL G A V ++D D L+FGAK+++
Sbjct: 128 SPYIIESSKKLLTMMGIPYIEAYGEGEAQAAYLVENGDAWAVASQDYDCLLFGAKRVVRN 187
Query: 127 LDLSGNCC---FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L ++ N + + +++ L + + D M IL G D+ G+KG+G K A
Sbjct: 188 LAINSNLGDLEYYNLKRVLDELDINREQLID-----MGILIGTDFSEGLKGVGAKTA 239
>gi|448382773|ref|ZP_21562268.1| flap endonuclease-1 [Haloterrigena thermotolerans DSM 11522]
gi|445661242|gb|ELZ14033.1| flap endonuclease-1 [Haloterrigena thermotolerans DSM 11522]
Length = 325
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K+ E RR++R S++A+ L R + Q T +
Sbjct: 72 HDITPVMVFDGGPSELKDDEIESRREQRRSYEAQ----LETAREEGDAVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVKRGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALK---MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD L + LK + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMD---LAATLKRHDLTLEQLIDA-----AILIGTDFNDGVSGIGPKTA 237
>gi|397774993|ref|YP_006542539.1| flap structure-specific endonuclease [Natrinema sp. J7-2]
gi|397684086|gb|AFO58463.1| flap structure-specific endonuclease [Natrinema sp. J7-2]
Length = 325
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K E RR++R S++A+ L R + Q T +
Sbjct: 72 HDITPVMVFDGGPSELKHDEIESRREQRRSYEAQ----LETAREEGDAVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FG+ +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVKRGDADYVGSEDYDALLFGSPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G MD E + + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGAPELMDLEATLAHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|448343822|ref|ZP_21532739.1| flap endonuclease-1 [Natrinema gari JCM 14663]
gi|445621905|gb|ELY75370.1| flap endonuclease-1 [Natrinema gari JCM 14663]
Length = 325
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K E RR++R S++A+ L R + Q T +
Sbjct: 72 HDITPVMVFDGGPSELKHDEIESRREQRRSYEAQ----LETAREEGDAVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FG+ +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVKRGDADYVGSEDYDALLFGSPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G MD E + + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGAPELMDLEATLAHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|328773336|gb|EGF83373.1| hypothetical protein BATDEDRAFT_22008 [Batrachochytrium
dendrobatidis JAM81]
Length = 388
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
++ + IK VFDG+ P ++ E +R +R + K A+ + +E + R++V
Sbjct: 75 MVENGIKPAYVFDGKP-PTLKSGELQKRGERRAEAQKEADTALETGDTENFNRFSRRTVK 133
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT + + + G+ + AP EA+AQ A L AG +ED D L FGA ++
Sbjct: 134 VTKEQNQECRRLLKLMGIPIVEAPCEAEAQCAALAKAGKVYAAGSEDMDTLTFGAPVLLR 193
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKG 174
L S A K+P+++F K F +CIL GCDY I+G
Sbjct: 194 HLTFS------------EAKKIPISEFNTQKVLEGLNFSHDEFIDLCILLGCDYCDSIRG 241
Query: 175 MGLKKA 180
+G +A
Sbjct: 242 IGPHRA 247
>gi|170036109|ref|XP_001845908.1| DNA-repair protein complementing XP-G cells [Culex
quinquefasciatus]
gi|167878599|gb|EDS41982.1| DNA-repair protein complementing XP-G cells [Culex
quinquefasciatus]
Length = 1217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 55 EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
E R + +T +M + + + GV IVAP EA+AQ A+LN D IT+DSD
Sbjct: 821 EKNRQARLGMSITEQMQQDCMDLLKLFGVPFIVAPMEAEAQCAFLNQIELTDGTITDDSD 880
Query: 115 LLVFGAKKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+ +FG K +YK + M+ E + A +M K + +L G DY TGI
Sbjct: 881 IWLFGG-KTVYKNFFNQQKLVMEFTIEGIERAFQMDRKKLI-----QLALLVGSDYTTGI 934
Query: 173 KGMG 176
G+G
Sbjct: 935 SGIG 938
>gi|443720454|gb|ELU10206.1| hypothetical protein CAPTEDRAFT_21886 [Capitella teleta]
Length = 377
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ H IK + VFDG+ K R +R+ + + + ++ V V
Sbjct: 74 MIDHGIKPVYVFDGKPPDMKSGELSKRAGRREEAQKALEKAEEAGEAENVEKFSKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + Q G+ + AP EA+AQ A L G+ TED D L FG+ ++
Sbjct: 134 TKEHNEECKQLLGLMGIPFVEAPCEAEAQCASLVKGGHVYATGTEDMDALTFGSTVLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L S A KMP+ +F+ K F +CIL GCDY I+G+
Sbjct: 194 LTFS------------EARKMPIKEFSLEKVLAGLELSYEEFIDLCILLGCDYCDSIRGI 241
Query: 176 GLKKAKDYV 184
G K+A D +
Sbjct: 242 GPKRAVDLI 250
>gi|452840124|gb|EME42062.1| hypothetical protein DOTSEDRAFT_174868 [Dothistroma septosporum
NZE10]
Length = 393
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 13/184 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG K R +++ +A E E + R++V V
Sbjct: 74 IVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQADHEEAKETGTAEEVEKFSRRTVRV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + GV I+AP EA+AQ A L AG +ED D L F + ++
Sbjct: 134 TREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASEDMDTLTFDSPVLLRH 193
Query: 127 LDLSGNC------CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S F+DR + L+M +F D +CIL GCDY +KG+G K A
Sbjct: 194 LTFSEQRKEPIQEIFLDR--VLEGLEMDQKQFID-----LCILLGCDYLDPVKGIGPKVA 246
Query: 181 KDYV 184
+ +
Sbjct: 247 LELI 250
>gi|167391034|ref|XP_001739610.1| Flap endonuclease 1-A [Entamoeba dispar SAW760]
gi|317374900|sp|B0EN90.1|FEN1_ENTDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|165896655|gb|EDR24004.1| Flap endonuclease 1-A, putative [Entamoeba dispar SAW760]
Length = 376
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH--LRQSV 64
L+ IK + VFDG+ P + E ++K ++ KA+ L+ G + Q+ ++++
Sbjct: 75 LIESGIKPVYVFDGK--PPEMKDGELNKRKENAQKAQEQLDKALEEGDKEQAKKLMKRTA 132
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+T + + V + + G+ C+ A EA+ A L AG TED D L G++ ++
Sbjct: 133 RMTKEQSDEVKKLLQLMGIPCVEANCEAEGTCAALVKAGKCYATATEDMDALTLGSEYVV 192
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
K S N RE S++ + F+ +F +CIL GCDY IKG+G
Sbjct: 193 RKFSASDNKKEPIREYSLSSI-LEETGFSMEQFIDLCILLGCDYCDTIKGVG 243
>gi|332021297|gb|EGI61676.1| Flap endonuclease 1-B [Acromyrmex echinatior]
Length = 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQS 63
++ IK + VFDG+ +L + E T+ R+ +AAE D EA R+
Sbjct: 74 MVEQGIKPVYVFDGKPPNLKSGELTKRAERRDEAQKLLQAAEE---DGNVEAIDKFNRRL 130
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V VT A + + G+ + AP EA+AQ A L AG TED D L FG +
Sbjct: 131 VKVTKTHADEAKELLQLMGIPYVDAPCEAEAQCAALVKAGKVFATATEDMDALTFGCNVL 190
Query: 124 IYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+ +L F + KLP + L++ +F D +CI+ GCDY IK
Sbjct: 191 LRRL------TFSEARKLPVQEIHFDKVLAGLELNHNEFID-----LCIMLGCDYTNSIK 239
Query: 174 GMGLKKAKDYV 184
G+G K+A + +
Sbjct: 240 GVGPKRAIELI 250
>gi|401409161|ref|XP_003884029.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
gi|325118446|emb|CBZ53997.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
Length = 1924
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+Q+ +VT +M V+ RA GV + AP EA+A AY AD VI++DSD LVFGA
Sbjct: 1422 QQTGNVTERMKDQVVALLRAFGVPFVTAPGEAEATAAYFTAQNLADAVISDDSDALVFGA 1481
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIK 173
++I F + +K +++M A F K + +L GCDY G+K
Sbjct: 1482 REIYRN--------FFENKK---SVEMYEASFIAHKLGLDQQQLILLAMLLGCDYTLGVK 1530
Query: 174 GMGLKKAKDYVFSIMDPDFENALR 197
G+G+ A + + + D A R
Sbjct: 1531 GIGIVNAVEVLRAYPSLDALRAFR 1554
>gi|389848285|ref|YP_006350524.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|448618490|ref|ZP_21666727.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|388245591|gb|AFK20537.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|445746861|gb|ELZ98319.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
Length = 326
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 20/227 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
H + + VFDG K+ RRK+R+ + + E EA ++ +
Sbjct: 70 FFEHDLTPVFVFDGGVTEMKDDEVAKRRKQREKAEERLEEAREAGDAVEAARMEARTQRL 129
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R V + AP E +AQ +Y+ G ADYV +ED D L+FGA + +
Sbjct: 130 TETIQDTSRELLRLLDVPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
L GN MD + + + D + +L G D+ GI G+G K
Sbjct: 190 LTSKGNPELMDLDATLEKHDISWEQLVD-----IAMLCGTDFNEGITGVGPK-------- 236
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
A++++ +G + S ++ + + + FL PV D
Sbjct: 237 -------TAVKEVKKHGDLWSVLEARGDSIPNADRVREFFLDPPVTD 276
>gi|261349732|ref|ZP_05975149.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
gi|288861687|gb|EFC93985.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ IK I VFDG K+ T + RR+ R+ + K E L EA+ + +S +
Sbjct: 68 MIEKDIKPIYVFDGTPSYLKQETIDQRRQTREESEKKWKEALAKQDTQEARKYAMRSSKL 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ I A E +AQ AYL G A V ++D D L+FGAK+++
Sbjct: 128 SPYIIESSKKLLTMMGIPYIEAYGEGEAQAAYLVENGDAWAVASQDYDCLLFGAKRVVRN 187
Query: 127 LDLSGNCC---FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L ++ N + + +++ L + + D M IL G D+ G+KG+G K A
Sbjct: 188 LAINSNLGDLEYYNLKRVLDELDINREQLID-----MGILIGTDFSEGLKGVGAKTA 239
>gi|289192094|ref|YP_003458035.1| flap structure-specific endonuclease [Methanocaldococcus sp.
FS406-22]
gi|288938544|gb|ADC69299.1| flap structure-specific endonuclease [Methanocaldococcus sp.
FS406-22]
Length = 326
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K IH LL + I I VFDG KE T + RR+ ++ + K E + + EA + +
Sbjct: 64 KTIH-LLENDITPIWVFDGEPPKLKEKTRKVRREMKEKAELKMKEAIKKEDFEEAAKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ +T KM N G+ + AP E +AQ +Y+ G V+++D D L++G+
Sbjct: 123 RVSYLTPKMVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYGSP 182
Query: 122 KIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
+++ L + ++ ++ L++ L D + I G DY G+KG+G K+
Sbjct: 183 RVVRNLTTTKEMPELIELNEVLEDLRISLDDLID-----IAIFMGTDYNPGGVKGIGFKR 237
Query: 180 AKDYVFSIMDPD 191
A + V S + D
Sbjct: 238 AYELVRSGVAKD 249
>gi|297526096|ref|YP_003668120.1| flap structure-specific endonuclease [Staphylothermus hellenicus
DSM 12710]
gi|297255012|gb|ADI31221.1| flap structure-specific endonuclease [Staphylothermus hellenicus
DSM 12710]
Length = 350
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + IK VFDG+ K E RRK R+ K E L A+ + S +
Sbjct: 72 ILENGIKPAYVFDGKPPEIKAREIEKRRKIREDASKKYEEALRRGDVEAARRYAMMSAKL 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T +M + + A G+ I A E +AQ AY+ G A ++D D L+FG+ ++I
Sbjct: 132 TDEMVHDAKKLLDAMGIPWIQAVAEGEAQAAYIVGKGDAWASASQDYDSLLFGSPRLIRN 191
Query: 127 LDLSGNCCFMDREKLPSA------------LKMPLAKF--TDAKFRYMCILSGCDYW-TG 171
L +SG R KLP LK L K T + Y+ +L G DY G
Sbjct: 192 LTISG------RRKLPRKNVYIEIKPEIIELKKLLEKLGITREQLIYVALLIGTDYNPDG 245
Query: 172 IKGMGLKKA 180
+KG+G KKA
Sbjct: 246 VKGIGPKKA 254
>gi|17510005|ref|NP_491168.1| Protein CRN-1 [Caenorhabditis elegans]
gi|75023012|sp|Q9N3T2.1|FEN1_CAEEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
gi|31747251|gb|AAP57297.1| cell death-related nuclease 1 [Caenorhabditis elegans]
gi|373220153|emb|CCD72553.1| Protein CRN-1 [Caenorhabditis elegans]
Length = 382
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+ + +K + VFDG+ K E R ++R + E EA+ R+ V V
Sbjct: 74 MFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALTEAKEKGDVKEAEKFERRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ + AP EA+AQ A+L AG +TED D L FG+ ++
Sbjct: 134 TKQQNDEAKRLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTVTEDMDALTFGSTVLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDA-----------KFRYMCILSGCDYWTGIKGM 175
F+ P A K+P+ +F + +F +CIL GCDY I+G+
Sbjct: 194 --------FL----APVAKKIPIKEFNLSLALEEMKLSVEEFIDLCILLGCDYCGTIRGV 241
Query: 176 GLKKAKDYV 184
G KKA + +
Sbjct: 242 GPKKAVELI 250
>gi|84996925|ref|XP_953184.1| endonuclease (xp-g/RAD2 homologue) [Theileria annulata strain
Ankara]
gi|65304180|emb|CAI76559.1| endonuclease (xp-g/RAD2 homologue), putative [Theileria annulata]
Length = 899
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 38/203 (18%)
Query: 62 QSVDVTHKMAL--NVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
SV + HK N+ + GV IVAP EA++Q AY+N +G VI++DSD LVFG
Sbjct: 578 HSVSLNHKHPYYENIHKLLDHFGVPYIVAPSEAESQCAYMNRSGKCYAVISDDSDSLVFG 637
Query: 120 AKKI-----------IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDY 168
AK + +YKLD + R++L AL + I+ GCDY
Sbjct: 638 AKCLLKNFYNDKVFELYKLDRIRRELGIGRKQL--AL--------------IAIICGCDY 681
Query: 169 WTGIKGMGLKKAKDYVFSIMDPDFEN-------ALRKINVYGKIGSYVKITKEFLTSFHN 221
G+KG+G+ A + + + P FE+ A ++V G + I K + + N
Sbjct: 682 TNGVKGIGIVNALEVIKAY--PTFEDLYDFRDWATSDLSVKGAVTDECPIRKSYKLAHVN 739
Query: 222 TNLMFLYQPVYDPVSKEVVPLNP 244
+ + + P + + LNP
Sbjct: 740 YRVNWTFSPDFPNREAYNMFLNP 762
>gi|308806964|ref|XP_003080793.1| FEN-1 (ISS) [Ostreococcus tauri]
gi|116059254|emb|CAL54961.1| FEN-1 (ISS) [Ostreococcus tauri]
Length = 428
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M+ ML A IK + VFDG+ K R+ KR+ +A E +
Sbjct: 109 MRTSRMLEAG-IKPVYVFDGKPPTMKGGELAKRKDKREEAEAALKAAREAGNQEEVEKLS 167
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V V+ + ++ V++ + G+ AP EA+A A + AG V TED D L F A
Sbjct: 168 KRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAGLVWAVGTEDMDTLTFAA 227
Query: 121 KKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
++ L D EK + L + +F D +CIL GCDY I+G+G
Sbjct: 228 PRVARNLMAPKSAEKPVLEFDYEKTIAGLGLTADQFID-----LCILCGCDYTDTIRGVG 282
Query: 177 LKKA 180
K A
Sbjct: 283 PKTA 286
>gi|154151645|ref|YP_001405263.1| flap endonuclease-1 [Methanoregula boonei 6A8]
gi|166973700|sp|A7IA59.1|FEN_METB6 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154000197|gb|ABS56620.1| XPG I [Methanoregula boonei 6A8]
Length = 333
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSH--LRQSV 64
L IK + VFDG+ K+ T +R+K RD K E ++RG E +++ R +
Sbjct: 69 FLEKGIKPVFVFDGKPPELKQETNAERKKLRDEAGEKYKE--AVERGDEEEAYRQARSAT 126
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
V + + G+ + AP E +AQ A++ G A + +++D D L+FGA ++
Sbjct: 127 RVDETIIATSKELLDLLGIPYVQAPSEGEAQAAFMVQRGDARFAVSQDYDTLLFGAPLLM 186
Query: 125 YKLDLSGNCCFMDR------EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
L +SG R E+L + + T + + IL G D+ G G+G K
Sbjct: 187 RNLTVSGKRKIRGRAVTVNPERLVLSEVLSGLSLTREQLVEVGILVGTDFNPGAAGVGAK 246
Query: 179 KA 180
A
Sbjct: 247 TA 248
>gi|281202271|gb|EFA76476.1| 5'3'-exonuclease N- and I-domain-containing protein
[Polysphondylium pallidum PN500]
Length = 670
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 127 LDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+D G C + E L + LA F R+MCILSGCDY + GMGLK A Y
Sbjct: 1 MDKEGYCEEIKTEDLATCKGKDYDLADFNLTMLRHMCILSGCDYLPSLTGMGLKTAYKY- 59
Query: 185 FSIMDPDFENALRKINVYGKIGSYVKITK----EFLTSFHNTNLMFLYQPVYDPVSKEVV 240
L+K KI +++ K ++ F+ +L F +Q V+DP +E+V
Sbjct: 60 -----------LKKHRDIEKIFKVLRMEKGMHTNYIEQFYKADLTFRHQRVFDPCLRELV 108
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
+P++ E S L E + + A ++A G +DP S + D EN+P +
Sbjct: 109 HFSPIDKEKTYNFESIDFLGEF-IENEIAEKIAKGIIDPNSKQSFD-------ENVPTPN 160
Query: 301 I 301
I
Sbjct: 161 I 161
>gi|312377995|gb|EFR24684.1| hypothetical protein AND_10542 [Anopheles darlingi]
Length = 1428
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 50 LDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVI 109
L+R Q+ L V +T +M + ++ + GV IVAP EA+AQ A+LN D I
Sbjct: 904 LEREKNKQNRL--GVSITDQMRNDCMELLQLFGVPYIVAPMEAEAQCAFLNQIELTDGTI 961
Query: 110 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA------KFRYMCIL 163
T+DSD+ +FG +K +YK F +++KL L+ + A K + +L
Sbjct: 962 TDDSDIWLFGGQK-VYK-------NFFNQQKL--VLEFTIEGIEQAFQMDRKKLIQLALL 1011
Query: 164 SGCDYWTGIKGMG 176
G DY TGI G+G
Sbjct: 1012 VGSDYTTGIHGIG 1024
>gi|312082398|ref|XP_003143428.1| flap endonuclease-1 [Loa loa]
gi|307761410|gb|EFO20644.1| flap endonuclease-1 [Loa loa]
Length = 345
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K + E R ++R + + ++ + L + R+ V V
Sbjct: 74 MIDNGIKPVYVFDGKPPQMKTSELEKRIERRAEAEKQRSDAVELGDEASVNKFARRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ + AP EA+AQ A L AG ++ED D L FG+ ++ +
Sbjct: 134 TKEQNEEAKRLVTLMGIPVLDAPCEAEAQCAALARAGKVFATVSEDMDALTFGSPILLRQ 193
Query: 127 LDLSGNCCFMDREKLP-------SALK---MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ S + +KLP LK M + +F D +CIL GCDY + I+G+G
Sbjct: 194 MIAS------EAKKLPVKEMNLNQVLKDFGMNMEQFID-----LCILLGCDYVSTIRGIG 242
Query: 177 LKKA 180
KKA
Sbjct: 243 PKKA 246
>gi|453084814|gb|EMF12858.1| flap endonuclease [Mycosphaerella populorum SO2202]
Length = 393
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG K R +++ + + E E + R++V V
Sbjct: 74 IVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQEQHEEAKETGTAEEVERFSRRTVRV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + GV IVAP EA+AQ A L AG +ED D L F A ++
Sbjct: 134 TKEHNAEAQRLLKLMGVPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLTFNAPVLLRH 193
Query: 127 LDLSGNC------CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S +DR + L L +F D MCIL GCDY +KG+G K A
Sbjct: 194 LTFSEQRKEPIQEIHLDR--VLEGLDFDLNQFID-----MCILLGCDYLDPVKGIGPKNA 246
>gi|156395868|ref|XP_001637332.1| predicted protein [Nematostella vectensis]
gi|156224443|gb|EDO45269.1| predicted protein [Nematostella vectensis]
Length = 250
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +++K + VFDG +P + R + E L SE R S +V
Sbjct: 65 LLFYRVKPVFVFDG-GVPVLKKKTLVRAYLEEMQTNLNREQRTLQ--SERARQARASAEV 121
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI--- 123
+ +M + R GV +V+P EA+AQ A+L++ G D IT+DSD+ +FG +++
Sbjct: 122 STEMLNESQELLRLFGVPFLVSPMEAEAQCAFLDMTGQTDGTITDDSDVFLFGGRRVYKN 181
Query: 124 IYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
I+ + C C E + L + +K F ++G DY GI+G+G A
Sbjct: 182 IFNQNKHAECYTC----EDIDKGLALSRSKMIKLAF-----VTGSDYTEGIQGLGAVSAM 232
Query: 182 DYVFSIMDPDF 192
+ + F
Sbjct: 233 EVLHEFSQDGF 243
>gi|91773853|ref|YP_566545.1| flap endonuclease-1 [Methanococcoides burtonii DSM 6242]
gi|121684238|sp|Q12UT1.1|FEN_METBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|91712868|gb|ABE52795.1| FEN1 flap endonuclease with 5'-3' exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 338
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ +K I VFDG+ K T R + R+S AK + EA + + S V
Sbjct: 68 LIEAGVKPIFVFDGKPPDFKSDTLAKRHEVRESATAKWEDAKAQGLEEEAYKYAQASSKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T +M + ++ G+ + AP E +AQ +Y+ G ADY+ ++D D +FGA +++
Sbjct: 128 TREMIDDSVRLLELMGIPYVKAPSEGEAQASYMVQKGDADYIGSQDYDSFLFGAPQVVRN 187
Query: 127 LDLSG------NCCFMDREKLPSALKMPLAKFTDAKFRY----MCILSGCDYWTGIKGMG 176
L ++G ++D + +L L + + + MC+ G DY TG++ +G
Sbjct: 188 LTITGKRKLPKKNIYVDVKPEVLSLVDSLGELGITRQQLIDIAMCV--GTDYNTGLENIG 245
Query: 177 LKKA 180
K+A
Sbjct: 246 PKRA 249
>gi|317374875|sp|C3KJE6.1|FEN1_ANOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229367576|gb|ACQ58768.1| Flap endonuclease 1-A [Anoplopoma fimbria]
Length = 380
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 82/184 (44%), Gaps = 13/184 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L H IK + VFDG+ K A E R +KR + A+ L ++ V V
Sbjct: 74 MLEHGIKPVYVFDGKPPQLKSAELEKRGEKRAEAEKMLAQAQELGEQENIDKFSKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + GV I AP EA+A A L AG TED D L FG ++
Sbjct: 134 TKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDMDGLTFGTNVLLRH 193
Query: 127 LDLSGNCCFMDREKLP------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S + +KLP S + + T+ +F +CI GCDY IKG+G K+A
Sbjct: 194 LTAS------EAKKLPIQELHYSRILQDIG-LTNEQFIDLCIPLGCDYCGTIKGIGPKRA 246
Query: 181 KDYV 184
D +
Sbjct: 247 IDLI 250
>gi|399576495|ref|ZP_10770250.1| flap endonuclease-1 [Halogranum salarium B-1]
gi|399237939|gb|EJN58868.1| flap endonuclease-1 [Halogranum salarium B-1]
Length = 326
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA---QSHLRQSVDV 66
H + I VFDG K+A E RR++++ + + E EA ++ ++ V
Sbjct: 73 HDLTPIFVFDGGVTELKDAEVEARREQKEKAQERLEEARERGDAVEAARLEARTQRLTAV 132
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
H+ + + V I AP E +AQ +Y+ G ADYV +ED D L+FGA + +
Sbjct: 133 IHETTRDFLDLL---DVPYIEAPAEGEAQASYMARRGDADYVGSEDYDTLLFGAPFTLRQ 189
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L G+ MD + + + + D + IL G D+ GIKG+G K A
Sbjct: 190 LTSKGDPELMDLDATLAKHDISYEQLVD-----IAILVGTDFNPGIKGIGPKTA 238
>gi|374327648|ref|YP_005085848.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
gi|356642917|gb|AET33596.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
Length = 346
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K A E RRK R+ + + L R + + +++V +
Sbjct: 72 LLESGIKPVYVFDGKPPEFKLAEIESRRKTREKAMEEVVKALKEGRKEDVIKYAKRAVFI 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T +M + GV + AP E +AQ AY+ + G+ V ++D D L+FG+ +++
Sbjct: 132 TSEMVEESRKLLSYMGVPWVQAPSEGEAQAAYMVVKGHCWAVGSQDYDALLFGSPRLVRN 191
Query: 127 LDLSGNCCFMDR--EKLPSALKM-PLAKFTDAKFRY----MCILSGCDYW-TGIKGMGLK 178
L +S + E P +++ + K K R + IL G DY G+ GMG +
Sbjct: 192 LAVSPKRRVGEEVVELAPEIIELDAVLKALRLKNREQLIDLAILLGTDYNPDGVPGMGPQ 251
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFH------NTNLMFLYQPVY 232
KA ++ + GS K+ L H FL PV
Sbjct: 252 KALKLIW------------------EFGSLEKMLDTVLKGVHFPVNPLEIKRFFLQPPVT 293
Query: 233 DPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKD-QAFQLALGNLDPFSLE 283
D + EV P E +RD + + E + K + + A G L SL+
Sbjct: 294 DEYTTEVK--TPDEERLRDFLVREHDFSEERVEKALERLRKARGKLRTSSLD 343
>gi|449299844|gb|EMC95857.1| hypothetical protein BAUCODRAFT_109503 [Baudoinia compniacensis
UAMH 10762]
Length = 393
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG K R +++ + E E + R++V V
Sbjct: 74 IVDNGIKPLYVFDGAPPKLKSGELAKRFQRKSEAQESHEEAKETGTAEEVEKFSRRTVRV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + GV I+AP EA+AQ A L AG +ED D L F + ++
Sbjct: 134 TREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASEDMDTLTFNSPVLLRH 193
Query: 127 LDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L F ++ K P S L+M L +F D +CIL GCDY +KG+G
Sbjct: 194 L------TFSEQRKEPIQEIHLDAVLSGLEMDLPQFID-----LCILLGCDYVDPVKGIG 242
Query: 177 LKKA 180
K A
Sbjct: 243 PKVA 246
>gi|68076243|ref|XP_680041.1| DNA repair endonuclease [Plasmodium berghei strain ANKA]
gi|56500911|emb|CAH98970.1| DNA repair endonuclease, putative [Plasmodium berghei]
Length = 1262
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 17 VFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQ 76
V G +++ +E K+ + ++ K EL+ E + ++ + +M ++
Sbjct: 891 VIQGLEGISEDMDKETIDKQLNENQKKGEELM-----KEYKKLKNNNITINEEMNEDIKL 945
Query: 77 ACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 136
G+ I AP EA+AQ +YLN Y D +I++DSD++VF K II F
Sbjct: 946 LLDFFGIPYIQAPCEAEAQCSYLNNNNYCDAIISDDSDVIVFSGKTIIKN--------FF 997
Query: 137 DREKL-----PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV------- 184
+++K + ++ L + D + +L GCDY G+ G+G+ A + V
Sbjct: 998 NKKKTVEVYEKNLIERKLGLYQDDLIN-ISMLCGCDYTVGVHGVGIVNALEIVKAFPTFD 1056
Query: 185 -FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLY 228
I+ N LR I +Y K+FL + N L +++
Sbjct: 1057 DLKILKEIVSNPLRDIYQENDENNYSDEIKKFLNTHRNYKLNWIF 1101
>gi|336122204|ref|YP_004576979.1| Flap structure-specific endonuclease [Methanothermococcus
okinawensis IH1]
gi|334856725|gb|AEH07201.1| Flap structure-specific endonuclease [Methanothermococcus
okinawensis IH1]
Length = 324
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSH 59
K I+ML + I I VFDG+ K T E+R+K ++ KA + + G+ + Q +
Sbjct: 64 KNIYML-ENDITPIWVFDGKPPELKHKTREERKKVKE--KAMEEYISAKEEGNLEDMQKY 120
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++ + K+ N + G+ I AP E +AQ +Y+ G V+++D D L++G
Sbjct: 121 AKRINYLEPKVVENSKRLLNLMGIPFINAPSEGEAQCSYMAKKGDVYAVVSQDYDALLYG 180
Query: 120 AKKIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDY-WTGIKGMGL 177
A + + + S ++ +++ AL + L D M IL G DY G+KG+G
Sbjct: 181 APRTVRNITASNKPLELIELDEVLGALNITLDNLID-----MAILIGTDYNIGGVKGIGP 235
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEF 215
KKA D V + ++ + V I + K+T E+
Sbjct: 236 KKALDIVKNNKMGEYIKNIENYEVIKNIFKHPKVTDEY 273
>gi|15679628|ref|NP_276745.1| flap endonuclease-1 [Methanothermobacter thermautotrophicus str.
Delta H]
gi|28380011|sp|O27670.1|FEN_METTH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|2622760|gb|AAB86106.1| DNA repair protein Rad2 [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 328
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEE-DRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
++ +I+VI VFDGR HL + + D RKK + +A E +DR A+ + +S
Sbjct: 68 VMEREIRVIYVFDGRSHHLKGETVSRRADIRKKSEVEWKRALEEGDIDR---AKKYAVRS 124
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
++ ++ + + G+ + AP E +AQ +Y+ G A V ++D D L+FGA ++
Sbjct: 125 SRMSSEILESSKRLLELLGIPYVQAPGEGEAQASYMVKMGDAWAVASQDYDCLLFGAPRV 184
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ L LSG + +L S L+ + + M +L G D+ G+KG+G ++
Sbjct: 185 VRNLTLSGKLEDPEIIELESTLRE--LSISHTQLVDMALLVGTDFNEGVKGIGARRG 239
>gi|358333862|dbj|GAA32436.2| flap endonuclease-1 [Clonorchis sinensis]
Length = 350
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
++ + IK + VF+G+ P+ +A E +R +R ++ + EA ++ V
Sbjct: 38 MIENGIKPVYVFEGKP-PSMKAGELAKRTERRIESSRELAKAEEEEDLEAIEKFSKRLVK 96
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT + + + R GV I AP EA+AQ A L AG V TED D L FG ++
Sbjct: 97 VTPQHNDDCKELLRLMGVPYIKAPGEAEAQCAALAKAGKVYAVGTEDMDALAFGCPVLLR 156
Query: 126 KLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
L F + KLP + L++ + +F D +CIL GCDY I+G+
Sbjct: 157 HL------TFSEARKLPIQEFNLPSVLAGLELSMDQFVD-----LCILLGCDYVDTIRGI 205
Query: 176 GLKKAKDYV 184
G KKA D +
Sbjct: 206 GPKKAIDLL 214
>gi|357601961|gb|EHJ63212.1| flap endonuclease-1 [Danaus plexippus]
Length = 266
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + Q + G+ + AP EA+AQ A L G V TED D L FGA
Sbjct: 16 RRLVKVTQQHGAEARQLLKLMGIPVVEAPCEAEAQCAELVKGGKVYAVATEDMDALTFGA 75
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F +F +CIL GCDY
Sbjct: 76 NVLLRHLTFS------------EARKMPVQEFHLDQVLRGLELEQTEFIDLCILLGCDYC 123
Query: 170 TGIKGMGLKKAKDYV 184
IKG+G K+A + +
Sbjct: 124 GSIKGIGPKRAIELI 138
>gi|294496492|ref|YP_003542985.1| flap endonuclease 1 [Methanohalophilus mahii DSM 5219]
gi|292667491|gb|ADE37340.1| flap endonuclease 1 [Methanohalophilus mahii DSM 5219]
Length = 339
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 99/237 (41%), Gaps = 27/237 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L IK + VFDG+ K T R+K R+ K E + + + S V
Sbjct: 68 LFEAGIKPVFVFDGKPPDFKADTISQRKKSREEALTKWDEAKEKGLSEDVYKYAQASSKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + +Q G+ C+ AP E +AQ AY+ G ADY ++D D L+FGA ++I
Sbjct: 128 DALIVEDSMQLLDYMGIPCVQAPSEGEAQAAYMVNKGDADYSASQDYDSLLFGAPRVIRN 187
Query: 127 LDLS------GNCCFMDREKLPSALK-MPLAKFTDAKFRYMCILS---GCDYWTGIKGMG 176
L ++ G ++D E P ++ M K D R + ++ G DY G++ +G
Sbjct: 188 LTITGKRKLPGKNVYIDVE--PESIDLMQNIKLLDIDRRQLIGIALCVGTDYNKGLEKVG 245
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
K AL+ I YG I ++ E + FL PV D
Sbjct: 246 PK---------------TALKLIKQYGSIHKILEHRGEVIDELDAKIDFFLNPPVTD 287
>gi|333986804|ref|YP_004519411.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
gi|333824948|gb|AEG17610.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
Length = 328
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 26/198 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRR--KKRDSHKAKAAELLILDRGSEAQSHLRQSV 64
L+ IK + VFDG K+ T+ RR K++ + KAA LD G+ ++ R+
Sbjct: 68 LIEKGIKPVYVFDGISSYLKKGTQAKRREVKEKSEKRWKAA----LDEGNTEEA--RKYA 121
Query: 65 DVTHKMALNVIQACRA----RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ +M+ +VI+ + G+ I A E +AQ +Y+ G A V ++D D ++FGA
Sbjct: 122 VRSSRMSSDVIEGSKKLLSLMGIPHIQAMGEGEAQASYMVEKGDAWCVGSQDYDCVLFGA 181
Query: 121 KKIIYKLDLSG---NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++ L ++G N ++ +K+ L++ + D + IL+G D+ G+KG+G
Sbjct: 182 TRMVKNLTITGGKANLELIELKKVLERLEITREQLID-----VAILAGTDFNEGVKGIGA 236
Query: 178 KKA----KDY--VFSIMD 189
KK K++ +F+I+D
Sbjct: 237 KKGLKLVKEHGDIFNILD 254
>gi|354544778|emb|CCE41503.1| hypothetical protein CPAR2_800550 [Candida parapsilosis]
Length = 614
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 29/199 (14%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I L+ I V++VFDG P K K H+ + +L + SE + +
Sbjct: 67 MSKILALVGLNISVMVVFDGILKPDKSGA-----GKPSDHEKELEKLHRTENFSEPKEFI 121
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ DV + LN I+ +A G EA+AQ AYL G D+VIT D D LVFGA
Sbjct: 122 QHLKDV---LKLNSIEFVQATG--------EAEAQCAYLQKLGIVDFVITNDVDSLVFGA 170
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP-------------LAKFTDAKFRYMCILSGCD 167
+++ K + LK + T ++ ++ L D
Sbjct: 171 TQVLRNYSRFVEDIGHSPTKKSATLKQKYYVTPVNMSKVEEITGLTRSRLVFLATLRRGD 230
Query: 168 YWTGIKGMGLKKAKDYVFS 186
Y +G+K MG+K A + S
Sbjct: 231 YSSGVKKMGIKNATNLALS 249
>gi|158299596|ref|XP_319693.4| AGAP008939-PA [Anopheles gambiae str. PEST]
gi|157013593|gb|EAA14799.5| AGAP008939-PA [Anopheles gambiae str. PEST]
Length = 1256
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + +T +M + ++ + GV IVAP EA+AQ A+LN D IT+DSD+ +FG
Sbjct: 881 RIGLSITEQMRRDCMELLQIFGVPFIVAPMEAEAQCAFLNQLDMTDGTITDDSDIWLFGG 940
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMP----LAKFTDAKFRYMCILSGCDYWTGIKGMG 176
KK +YK F +++KL + + + K + +L G DY TGI G+G
Sbjct: 941 KK-VYK-------NFFNQQKLVLEFTIEGIEQMFQMDRKKLIQLALLVGSDYTTGIHGIG 992
>gi|452981413|gb|EME81173.1| hypothetical protein MYCFIDRAFT_189405 [Pseudocercospora fijiensis
CIRAD86]
Length = 393
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAE-LLILDRGSEAQSHLRQSVD 65
++ + IK + VFDG P ++ E +R +R S +A E + E + R++V
Sbjct: 74 IVDNGIKPVYVFDGAP-PKLKSGELAKRFQRKSEAQEAHEDAKEIGTAEEVEKFSRRTVR 132
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT + + + GV I+AP EA+AQ A + AG +ED D L F + ++
Sbjct: 133 VTREHNQEAQRLLKLMGVPYIIAPTEAEAQCAVIARAGKVYAAASEDMDTLTFASPVLLR 192
Query: 126 KLDLSGNC------CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
KL S +DR + L M +F D +CIL GCDY +KG+G K
Sbjct: 193 KLTFSEQRKEPIQEIHLDR--VLEGLDMDQNQFID-----LCILLGCDYLDPVKGIGPKN 245
Query: 180 A 180
A
Sbjct: 246 A 246
>gi|291239422|ref|XP_002739622.1| PREDICTED: flap structure-specific endonuclease 1-like
[Saccoglossus kowalevskii]
Length = 379
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ H IK + VFDG+ K R +KR+ + A+ + R+ V V
Sbjct: 74 MVDHGIKPLYVFDGKPPDLKSGELSKRAEKREEAEKALAKAEEEGETENVNKYQRRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ + AP EA+AQ A L AG TED D L FG+ ++
Sbjct: 134 TKEHNEECKKLLTFMGIPYLDAPGEAEAQCAELVKAGKVYATATEDMDSLTFGSSTVVRH 193
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
+ S C + + + L++ +F D +CIL GCDY I+G+G K+A D
Sbjct: 194 MTFSEARKMPCQEYNLNNILAELELSQDEFID-----LCILLGCDYCDSIRGIGPKRAID 248
Query: 183 YV 184
+
Sbjct: 249 LI 250
>gi|378754698|gb|EHY64727.1| flap endonuclease 1-B [Nematocida sp. 1 ERTm2]
Length = 342
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 29/191 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ I + +FDG KE +RR +++ + +L + SE H +++V
Sbjct: 74 LIEKGIVPVYIFDGLAPELKENILVERRARKEQAER---DLEQAETESEKMKHAKRTVRA 130
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + A GV + AP EA+ A LNIA + V++ED D L FG K ++
Sbjct: 131 TKYHVESAQALLSAMGVPYMTAPNEAEGFCAALNIANAVNGVVSEDMDSLAFGGKVLL-- 188
Query: 127 LDLSGNCCFMDREKLPSALKMPLA-------------KFTDAKFRYMCILSGCDYWTGIK 173
R P+ +K +A A+F MCIL GCDY K
Sbjct: 189 -----------RNFFPALMKKKMAVMEISLDEVLKQTGLDQAEFIDMCILLGCDYCQKPK 237
Query: 174 GMGLKKAKDYV 184
G+G KK D V
Sbjct: 238 GLGPKKVYDLV 248
>gi|433592003|ref|YP_007281499.1| flap structure-specific endonuclease [Natrinema pellirubrum DSM
15624]
gi|448334339|ref|ZP_21523517.1| flap endonuclease-1 [Natrinema pellirubrum DSM 15624]
gi|433306783|gb|AGB32595.1| flap structure-specific endonuclease [Natrinema pellirubrum DSM
15624]
gi|445620225|gb|ELY73731.1| flap endonuclease-1 [Natrinema pellirubrum DSM 15624]
Length = 325
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H I +MVFDG K+ E RR++R S++ E L R + Q T +
Sbjct: 72 HDITPVMVFDGGPSELKDDEIESRREQRRSYE----EQLETAREEGDAVAIAQLESRTQR 127
Query: 70 MALNVIQACRA--RGVDC--IVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + + R R +D + AP E +AQ A++ G ADYV +ED D L+FGA +
Sbjct: 128 LTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVKHGDADYVGSEDYDALLFGAPLTLR 187
Query: 126 KLDLSGNCCFMDREKLPSALK---MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L G+ MD L + LK + L + DA IL G D+ G+ G+G K A
Sbjct: 188 QLTSKGDPELMD---LAATLKRHDLTLEQLIDA-----AILIGTDFNDGVSGIGPKTA 237
>gi|145514642|ref|XP_001443226.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124447858|sp|A0CYG2.1|FEN12_PARTE RecName: Full=Flap endonuclease 1-2; Short=FEN-1-2; AltName:
Full=Flap structure-specific endonuclease 1-2
gi|124410604|emb|CAK75829.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR--QSV 64
L + IK + VFDG+ P + E R+K+ +AK L L++G Q+ L+ ++
Sbjct: 78 FLENGIKPVWVFDGK--PPLLKSGELARRKKLKEEAKVKTELALEQGDMQQALLQNQRTT 135
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++ M + I+ + G I+AP EA+AQ A L AG TED D L F ++
Sbjct: 136 TISSIMKEDAIKMLQLMGCPVIIAPCEAEAQCAELCRAGKIYATATEDMDALTFRTPVLL 195
Query: 125 YKLDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ + + + + L++ +F D +CIL GCDY I+G+G
Sbjct: 196 RGFNTKKEPIYEIIYDDMIKELELTYEQFVD-----LCILCGCDYTEKIEGIG 243
>gi|195397917|ref|XP_002057574.1| GJ18024 [Drosophila virilis]
gi|194141228|gb|EDW57647.1| GJ18024 [Drosophila virilis]
Length = 1238
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
+E R + ++ +M+ + + R G+ IVAP EA+AQ A+LN G + IT+DS
Sbjct: 858 AERNRQDRMGMSISQRMSNDCQELLRLFGIPYIVAPMEAEAQCAFLNAVGITNGTITDDS 917
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
D+ +FG + +YK + N + E ++ D + C++ G DY TGI
Sbjct: 918 DIWLFGG-RTVYKNFFAQNKHVL--EFRAEQIEQTFNCSRDKLIQLACLV-GSDYTTGIH 973
Query: 174 GMGLKKAKDYV--FSIMDPD 191
G+G A + + FS + P+
Sbjct: 974 GIGAVTALEILASFSTLTPN 993
>gi|16082069|ref|NP_394495.1| flap endonuclease-1 [Thermoplasma acidophilum DSM 1728]
gi|28380022|sp|Q9HJD4.1|FEN_THEAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|10640350|emb|CAC12164.1| DNA repair protein RAD2 related protein [Thermoplasma acidophilum]
Length = 336
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 24/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD- 65
LL ++I+ + VFDG+ P K T +R+ ++ KA+ E ++RG E ++
Sbjct: 68 LLENRIRPVYVFDGKPSPLKNRTISERQMMKEKAKAELEEA--IERGEEDLRQYYSRINY 125
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T ++ + + G+ + AP E +AQ +Y+ D VI++D D L+FGA+KI+
Sbjct: 126 ITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKKN-VDGVISQDYDCLLFGARKILR 184
Query: 126 KLDLSGNCCFMDREKLPSA------------LKMPLA--KFTDAKFRYMCILSGCDYWTG 171
+ G R K+P L L+ + + + IL G D+ G
Sbjct: 185 NFAIYG------RRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEG 238
Query: 172 IKGMGLKKA 180
IKG+G KKA
Sbjct: 239 IKGIGAKKA 247
>gi|124028216|ref|YP_001013536.1| flap endonuclease-1 [Hyperthermus butylicus DSM 5456]
gi|166973697|sp|A2BMI0.1|FEN_HYPBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|123978910|gb|ABM81191.1| Endonuclease [Hyperthermus butylicus DSM 5456]
Length = 350
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQ-SVD 65
L+ H IK++ VFDG+ P + E +RRK+ S K E + ++A Q +
Sbjct: 71 LMEHGIKIVYVFDGKP-PEMKYLEIERRKRVKSEAVKKYEEAVKKGDTKAARRYAQMAAR 129
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T +M + + A GV + AP E +AQ A++ G A ++D D L+FG+ +++
Sbjct: 130 LTDEMVEDAKKLLDAMGVPWVQAPAEGEAQAAFMARRGDAWAAASQDYDSLLFGSPRLVR 189
Query: 126 KLDLSGNCC-------------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWT-G 171
L ++G ++ +KL AL + T + + IL G DY G
Sbjct: 190 NLAITGRRKLPRKDVYVEIKPELIELDKLLKALGI-----TREQLVALGILIGTDYNPDG 244
Query: 172 IKGMGLKKAKDYVFSIMDP 190
+KG+G K A V + DP
Sbjct: 245 VKGIGPKTALKMVKAHRDP 263
>gi|428169402|gb|EKX38336.1| flap endonuclease 1 [Guillardia theta CCMP2712]
Length = 435
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+ I M+ A I+ + VFDG+ K R +RD + E E +
Sbjct: 102 RTIAMVKAG-IRPLYVFDGKPPSLKSGEIASRNLRRDEGAKRLQEATEEGNVEEMNKFAK 160
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ VT + A + R GV + AP EA+AQ A L G TED D L G+
Sbjct: 161 RTTRVTKQHAEECKRLLRLLGVPTVDAPSEAEAQCAALAKNGLVYASATEDMDALCCGSP 220
Query: 122 KIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTG 171
++ +L +S + KLP S+L + + +F D CIL GCD+
Sbjct: 221 ILVRRLTMS------EARKLPVLEYHLDQVLSSLGLNMTQFVD-----FCILCGCDFSET 269
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVK 210
IKG+G K +AL I +G I S+++
Sbjct: 270 IKGIGPK---------------SALHGIRKHGNIESFIE 293
>gi|82187497|sp|Q6TNU4.1|FEN1A_DANRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|37362214|gb|AAQ91235.1| flap structure-specific endonuclease 1 [Danio rerio]
gi|47940409|gb|AAH71488.1| Fen1 protein [Danio rerio]
Length = 380
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL----RQ 62
+L IK + VFDG+ K E R ++R A+A +LL + + Q ++ ++
Sbjct: 74 MLESGIKPVYVFDGKPPQLKSGELEKRVERR----AEAEKLLAQAQEAGEQENIDKFSKR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + GV I AP EA+A A L AG TED D L FG
Sbjct: 130 LVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDMDGLTFGTTV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A K+P+ +F T +F +CIL GCDY
Sbjct: 190 LLRHLTAS------------EAKKLPIQEFHFSRILQDMELTHQQFIDLCILLGCDYCGT 237
Query: 172 IKGMGLKKAKDYV 184
IKG+G K+A D +
Sbjct: 238 IKGIGPKRAIDLI 250
>gi|195116755|ref|XP_002002917.1| GI10377 [Drosophila mojavensis]
gi|193913492|gb|EDW12359.1| GI10377 [Drosophila mojavensis]
Length = 1255
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
+E R + ++ +M+ + R G+ IVAP EA+AQ A+LN G + IT+DS
Sbjct: 851 AERNRQDRMGLSISQRMSSDCQDLLRLFGIPYIVAPMEAEAQCAFLNAVGITNGTITDDS 910
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG 171
D+ +FG + +YK + N ++ E++ K + C++ G DY TG
Sbjct: 911 DIWLFGG-RTVYKNFFAQNKHVLEFRAEQIEKTFNCNRGKL----IQLACLV-GSDYTTG 964
Query: 172 IKGMGLKKAKDYV--FSIMDPDFE 193
I G+G A + + FS P+ E
Sbjct: 965 IHGIGAVTALEILASFSTSTPNTE 988
>gi|50302247|ref|XP_451057.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640188|emb|CAH02645.1| KLLA0A01320p [Kluyveromyces lactis]
Length = 584
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 35/184 (19%)
Query: 14 VIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALN 73
++++FDG + RRKKR K A L D +S R + D +
Sbjct: 78 IVIIFDGTF-----KLDGKRRKKR-----KVATLW--DSYWLMRSMNRFNHDSVSYVDDY 125
Query: 74 VIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNC 133
+I+ C+ + I AP E +AQ A+L + G D+V++ D+D+L FGA K++ G
Sbjct: 126 IIECCKLFNIQTINAPGEGEAQCAFLQLVGQVDFVLSNDADVLSFGASKVLKNYSKHG-- 183
Query: 134 CFMDREKLPSALKMPL--------AKFTDA---------KFRYMCILSGCDYWTGIKGMG 176
+ LP++ P+ F D +F +L G DY G+KG+G
Sbjct: 184 ----WQDLPNSSNSPVKSKQNERFVTFVDLDIIKDWDRDRFVLFNLLVGSDYNGGVKGLG 239
Query: 177 LKKA 180
K+A
Sbjct: 240 GKRA 243
>gi|166085105|dbj|BAF99817.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K E+R K++ +A+ L EA+ + + +
Sbjct: 38 LVEEGIKPVYVFDGKPPEMKSREVEERLKRKAEAEARYRRALEAGEVEEARKYAMMAARL 97
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + A G+ + AP E +AQ AY+ G A ++D D L+FG+ +++
Sbjct: 98 TSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
Query: 127 LDLSGNCCFMDREKL----PSALKMP--LAKF--TDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G R++ P +++ L+K T + + IL G DY GI+G G
Sbjct: 158 LAITGRRKLPGRDQYVEIKPEIIELESLLSKLGITREQLIAVGILLGTDYNPGGIRGYGP 217
Query: 178 KKAKDYVFSIMDP 190
K A V S+ DP
Sbjct: 218 KTALRLVKSLGDP 230
>gi|410076602|ref|XP_003955883.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
gi|372462466|emb|CCF56748.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
Length = 988
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT M +V + G+ + AP EA+AQ A L G D +IT+DSD+ +FG
Sbjct: 718 RDSDEVTMDMITDVQELLSRFGIPFVTAPMEAEAQCAELIALGLVDGIITDDSDVFLFGG 777
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
K+ L F + + + +L + K + + +L G DY TGIKGMG
Sbjct: 778 TKVYKNLFQDKKYVEFYNYDTIEKSLGIDRKKMIE-----LALLLGSDYTTGIKGMG 829
>gi|333910543|ref|YP_004484276.1| Flap structure-specific endonuclease [Methanotorris igneus Kol 5]
gi|333751132|gb|AEF96211.1| Flap structure-specific endonuclease [Methanotorris igneus Kol 5]
Length = 326
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML + I + VFDG+ KE T E+RRK R+ K + + ++ E Q + +
Sbjct: 64 KTIYML-ENDITPVWVFDGKPPKLKEKTREERRKMREKAKEEFTKAKEMENIDEMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ +T + N + GV + AP E + Q +Y+ G VI++D D L++GA
Sbjct: 123 RMNFLTKDIVENSKKLLDLMGVPYVNAPAEGEGQASYMAKKGDVFCVISQDYDALLYGAP 182
Query: 122 KIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
+I+ L + ++ E + + L + D M IL G DY G+KG+G KK
Sbjct: 183 RIVRNLTATKEELELIELENVLNELGISHDDLID-----MAILIGTDYNPKGVKGIGPKK 237
Query: 180 AKDYVFS 186
A + V S
Sbjct: 238 ALEIVKS 244
>gi|194760687|ref|XP_001962569.1| GF15526 [Drosophila ananassae]
gi|190616266|gb|EDV31790.1| GF15526 [Drosophila ananassae]
Length = 1237
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN A IT+DSD+ +FG
Sbjct: 850 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNAADLTHGTITDDSDIWLFGG 909
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ +YK + N ++ E++ K + C++ G DY TGI G+G
Sbjct: 910 -RTVYKNFFAQNKHVLEFRSEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIGAV 963
Query: 179 KAKDYV--FSIMDP 190
A + + FS DP
Sbjct: 964 TALEILASFSGHDP 977
>gi|71023659|ref|XP_762059.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
gi|74699231|sp|Q4P1V1.1|FEN1_USTMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46101624|gb|EAK86857.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
Length = 374
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 21/130 (16%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V T + V + G+ C++AP EA+AQ A L AG +ED D L FG
Sbjct: 129 RRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDMDTLTFGT 188
Query: 121 KKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWT 170
++ L S +++KLP L+M +A+F D +CIL GCDY
Sbjct: 189 PILLKHLTAS------EQKKLPVHQVDLAKALEGLQMTMAQFID-----LCILLGCDYLD 237
Query: 171 GIKGMGLKKA 180
IKG+G K A
Sbjct: 238 PIKGIGPKTA 247
>gi|296087697|emb|CBI34953.3| unnamed protein product [Vitis vinifera]
Length = 1449
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 46 ELLILDR-----GSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN 100
E++ILD+ G E + R + V+ +M + + G+ I+AP EA+AQ AY+
Sbjct: 769 EMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME 828
Query: 101 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 157
+A D V+T+DSD+ +FGA+ + + F +R+ + + + K
Sbjct: 829 LANLVDGVVTDDSDVFLFGARSVYKNI-------FDERKYVETYFMKDIETELGLNREKV 881
Query: 158 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKI------NVYGKIGSYVKI 211
M +L G DY G+ G+G+ A + + S + D + R+ N+ GK+
Sbjct: 882 IRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGS 941
Query: 212 TKEFLTSFHNTNL 224
+ S HN ++
Sbjct: 942 SSRKRGSKHNESV 954
>gi|119719343|ref|YP_919838.1| flap endonuclease-1 [Thermofilum pendens Hrk 5]
gi|119524463|gb|ABL77835.1| flap endonuclease 1 [Thermofilum pendens Hrk 5]
Length = 341
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 34/254 (13%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+Y + + I VFDG P K E R+K+R+ K + AELL +A S
Sbjct: 64 RYSRLAYEYDASFIFVFDGSPHPLKARELEKRKKQREKAKQEYAELLSKGDLRKAFSKAV 123
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
S +V ++ + + R G + A +A+AQ AYL G A V + D D L++G+
Sbjct: 124 VSAEVDDRIVESTKRLVRLMGFPVVDAVHDAEAQAAYLVKRGEAWAVSSMDWDSLLYGSP 183
Query: 122 KIIYKLDLSGNCCFMDREK-------------LPSALKMPLAKFTDAKFRYMCILSGCDY 168
+++ L L+G ++K L S + L + D + IL G DY
Sbjct: 184 RLVRYLTLTGFEWLPSKQKARKLIPELVTLEELLSGHGITLRQLVD-----IAILVGTDY 238
Query: 169 WTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSY-VKITKEFLTSFHNTNLMFL 227
G+KG+G + AL+ I YG + + V + + ++ +FL
Sbjct: 239 NEGVKGVGPLR---------------ALKMIKRYGSLENLPVSVRRHLPENYEAVRQIFL 283
Query: 228 YQPVYDPVSKEVVP 241
P+ + S P
Sbjct: 284 NPPLNEKYSLSFSP 297
>gi|435850378|ref|YP_007311964.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
gi|433661008|gb|AGB48434.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
Length = 338
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K T E R R+ K E EA + + S V
Sbjct: 68 LMEEGIKPVFVFDGKPSHLKARTIEKRTADREKATIKWEEAKSKGLAEEAYMYAQASSRV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
TH++ + + A G+ + AP E ++Q A++ G A+YV ++D D L+FGA ++
Sbjct: 128 THEIVEDSRKLLVAMGIPWVDAPSEGESQAAHMVKRGDANYVASQDYDSLLFGASFVVRN 187
Query: 127 LDLSG------NCCFMDREKLPSALKMPLAKFT--DAKFRYMCILSGCDYWTGIKGMGLK 178
L ++G F+D + L LA+ ++ + + G DY G++ +G K
Sbjct: 188 LTITGKRKLPKKNIFVDVKPEIMELGENLAELEIDQSQLIEIALCVGTDYNRGLEKIGPK 247
Query: 179 KA 180
KA
Sbjct: 248 KA 249
>gi|166085107|dbj|BAF99818.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K E+R K++ +A+ L EA+ + + +
Sbjct: 38 LVEEGIKPVYVFDGKPPEMKSREVEERLKRKAEAEARYRRALEAGEVEEARKYAMMAARL 97
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + A G+ + AP E +AQ AY+ G A ++D D L+FG+ +++
Sbjct: 98 TSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
Query: 127 LDLSGNCCFMDREKL----PSALKMP--LAKF--TDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G R++ P +++ L+K T + + IL G DY GI+G G
Sbjct: 158 LAITGRRKLPGRDQYVEIKPEIIELESLLSKLGITREQLIAVGILLGTDYNPGGIRGYGP 217
Query: 178 KKAKDYVFSIMDP 190
K A V S+ DP
Sbjct: 218 KTALRLVKSLGDP 230
>gi|118596628|dbj|BAF37974.1| flap endonuclease-1 [Thermoplasma sp. P61]
Length = 328
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD- 65
LL +KI+ + VFDG+ P K T +R+ ++ K + E ++RG E ++
Sbjct: 68 LLENKIRPVYVFDGKPSPLKNRTISERQLMKEKAKVELEEA--IERGEEDLRQYYSRINY 125
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T ++ + + G+ I AP E +AQ +Y+ D VI++D D L+FGA+KI+
Sbjct: 126 ITPQIVDDTKKLLDYMGIPYIDAPSEGEAQASYMTKKN-VDGVISQDYDCLLFGARKILR 184
Query: 126 KLDLSGNCCFMDREKLPSA------------LKMPLA--KFTDAKFRYMCILSGCDYWTG 171
+ G R K+P L L+ + + + IL G D+ G
Sbjct: 185 NFAIYG------RRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEG 238
Query: 172 IKGMGLKKA 180
IKG+G KKA
Sbjct: 239 IKGIGAKKA 247
>gi|448568151|ref|ZP_21637728.1| flap endonuclease-1 [Haloferax lucentense DSM 14919]
gi|445727101|gb|ELZ78715.1| flap endonuclease-1 [Haloferax lucentense DSM 14919]
Length = 326
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAK------AAELLILDRGSEAQSHLRQS 63
H + + VFDG K+ RR++R+ + + A +L+ R L ++
Sbjct: 73 HDLTPVFVFDGGVTEMKDDEVAKRREQREKAEERLEAAREAGDLVEAARMEARTQRLTET 132
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ T + L++ V + AP E +AQ +Y+ G ADYV +ED D L+FGA
Sbjct: 133 IQDTSRELLSLFD------VPVVEAPAEGEAQASYMARTGDADYVGSEDYDTLLFGAPYT 186
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L GN MD L L K T + + +L G D+ GI G+G K A
Sbjct: 187 LRQLTSKGNPELMD-------LDATLDKHDITHEQLVDIAMLCGTDFNEGITGIGPKTA 238
>gi|269859663|ref|XP_002649556.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
gi|317374899|sp|B7XHS8.1|FEN1_ENTBH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220067107|gb|EED44575.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
Length = 358
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 33/186 (17%)
Query: 15 IMVFDGRHLPAKEATEE--DRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMAL 72
+ VFDG +P +E E R K+R AK + + + R +V KM
Sbjct: 81 VFVFDG--IPPEEKIHEFEKRTKRRQDINAKLQDAIEQQDQVLVSKYDRMNV----KMEK 134
Query: 73 NVIQAC----RARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
+ I+ C R + ++AP EA+A A+L + + D V TED D L FG+ ++ +
Sbjct: 135 SHIEECQKTLRLLNIPYVIAPSEAEAYCAWLCKSKFVDAVATEDMDSLCFGSPLLLRNFN 194
Query: 129 LSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ + +KLP L+ + +F D +CIL GCDY I+G+G+K
Sbjct: 195 TALS------QKLPVEEYNLHKILEGLQFTMEQFVD-----LCILLGCDYSATIRGVGMK 243
Query: 179 KAKDYV 184
+A +Y+
Sbjct: 244 RAFEYI 249
>gi|443894995|dbj|GAC72341.1| hypothetical protein PANT_7d00055 [Pseudozyma antarctica T-34]
Length = 373
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 21/130 (16%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V T + V Q + G+ C++AP EA+AQ A L AG +ED D L FG
Sbjct: 129 RRQVRPTRQHNEEVRQLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDMDTLTFGT 188
Query: 121 KKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWT 170
++ L S +++KLP L+M + +F D +CIL GCDY
Sbjct: 189 PILLKHLTAS------EQKKLPVHQVDLPKALEGLQMDMPQFID-----LCILLGCDYLD 237
Query: 171 GIKGMGLKKA 180
IKG+G K A
Sbjct: 238 PIKGIGPKTA 247
>gi|336364544|gb|EGN92901.1| hypothetical protein SERLA73DRAFT_190513 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388587|gb|EGO29731.1| hypothetical protein SERLADRAFT_457914 [Serpula lacrymans var.
lacrymans S7.9]
Length = 629
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 67 THKMALNVIQACR----ARGVDCI--VAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
TH +L Q CR A G+ CI PFEA+A + L I G+ADYV +ED+D+LV+ A
Sbjct: 419 THPPSLQTYQECREIIRAMGIPCIESTGPFEAEALASSLVINGFADYVASEDTDVLVYEA 478
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
I + G + + S L++ + + D +L G D+ IK +G ++A
Sbjct: 479 PLIRNIANREGPLIVVSGSDVRSVLQLERSSYID-----FALLLGTDFSQRIKNVGPQRA 533
Query: 181 KDYV 184
++
Sbjct: 534 LKFI 537
>gi|229577369|ref|NP_001153363.1| mutagen-sensitive 201 [Nasonia vitripennis]
Length = 1167
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
RQ++D+T +M L + R GV IVAP EA+AQ AYL D IT+DSD+ +FG
Sbjct: 765 RQAIDITDQMRLEAQELLRLFGVPYIVAPMEAEAQCAYLEQIKLTDGTITDDSDIWLFG- 823
Query: 121 KKIIYKLDLSGNCC----FMDREKLPSALKMPLA---KFTDAKFRYMCILSGCDYWTGIK 173
G+C F + +++ L + K + + + +L G DY G+
Sbjct: 824 ----------GHCVYKNFFDNNKRVLQFLSQDIEHHFKLSRREMIQLALLVGSDYTNGLA 873
Query: 174 GMG 176
G+G
Sbjct: 874 GVG 876
>gi|413932542|gb|AFW67093.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 294
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+ I ML A IK + VFDG K+ R KRD + + + + +
Sbjct: 71 RTIRMLEA-GIKPVFVFDGEPPEMKKKELAKRSLKRDDAIKDLNRAMEIGDENAIEKFSK 129
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYL--NIAGYADYVITEDSDLLVFG 119
++V VT + + + R GV + AP EA+AQ A L N YA V +ED D L FG
Sbjct: 130 RTVKVTGRHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYA--VASEDMDTLTFG 187
Query: 120 AKKIIYKLDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
A++ + L G D K+ L + + +F D +CILSGCDY I+G+
Sbjct: 188 ARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFID-----LCILSGCDYCENIRGI 242
Query: 176 GLKKA 180
G ++A
Sbjct: 243 GGQRA 247
>gi|393242535|gb|EJD50052.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 165
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ VT ++ I+ R G+ +VAP+EAD Q+A+L+ G D V +EDS+L+VFG
Sbjct: 90 KASMAVTTQVVTQTIKILRTAGIAYLVAPYEADVQLAFLDRVGLVDAVYSEDSNLVVFGV 149
Query: 121 KKIIYKLDLSGNCCFM 136
+K++ KL G C +
Sbjct: 150 QKVVCKLQDDGACAIV 165
>gi|156398094|ref|XP_001638024.1| predicted protein [Nematostella vectensis]
gi|317374916|sp|A7RRJ0.1|FEN1_NEMVE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156225141|gb|EDO45961.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
++ + IK + VFDG+ P ++ E +R +R KA L + EA
Sbjct: 74 MVENGIKPVYVFDGKP-PQLKSGELAKRTERREEAQKA-----LSKAEEAGDTENIDKFS 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + Q + G+ + AP EA+AQ A L +G TED D L FG
Sbjct: 128 RRLVRVTKEHNEECKQLLKLMGIPYVEAPCEAEAQCAALVKSGKVYATGTEDMDALTFGT 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F + +F +CIL GCDY
Sbjct: 188 TVMLRHLTFS------------EAKKMPIKEFHLQNVLSEAGLSQDEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
IKG+G K++ D +
Sbjct: 236 DSIKGIGPKRSVDLI 250
>gi|357122637|ref|XP_003563021.1| PREDICTED: flap endonuclease 1-B-like [Brachypodium distachyon]
Length = 413
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG K+ R +RD + + + +++V +
Sbjct: 75 LLEAGIKPVFVFDGEPPDLKKRELAKRSLRRDDASEDLNRAIEVGDEDSIEKFSKRTVKI 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K + + R GV + AP EA+AQ A L A V +ED D L FG+ + +
Sbjct: 135 TKKHNDDCKKLLRLMGVPVVEAPGEAEAQCASLCKNHKAYAVASEDMDSLTFGSLRFLRH 194
Query: 127 L-DLSGNCCFMDREKLPSALK---MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ DLS + ++P L+ + + +F D +CILSGCDY IKG+G ++A
Sbjct: 195 ITDLSFKRSPVTEFEVPKVLEELGLTMDQFID-----LCILSGCDYCENIKGIGGQRA 247
>gi|341583087|ref|YP_004763579.1| flap endonuclease-1 [Thermococcus sp. 4557]
gi|340810745|gb|AEK73902.1| flap endonuclease-1 [Thermococcus sp. 4557]
Length = 341
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQSV 64
L+ IK VFDG+ K+ E RR+ R+ K K E L+RG+ EA+ + ++
Sbjct: 68 LMEAGIKPAYVFDGKPPEFKKKEIEKRREAREEAKEKWYE--ALERGNLEEAKKYAMRAT 125
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
V + + + G+ I AP E +AQ AY+ ++D D L+FGA +++
Sbjct: 126 RVNEGLINDAKRLLELMGIPVIQAPSEGEAQAAYMAARKKVYASASQDYDSLLFGAPRLV 185
Query: 125 YKLDLSGNCCFMDREKLPS------------ALKMPLAKFT--DAKFRYMCILSGCDYW- 169
+ ++G R KLP L+ L + K M IL G DY
Sbjct: 186 RNVTITG------RRKLPGKNVYVEVRPELIVLEEVLKELGIDREKLIEMAILVGTDYNP 239
Query: 170 TGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQ 229
GIKG+G KKA V DP L+K N ++ Y KEF FL
Sbjct: 240 GGIKGIGPKKALTIVKRTKDP-----LKKYNKDSEVDLYA--IKEF----------FLNP 282
Query: 230 PVYD 233
PV D
Sbjct: 283 PVTD 286
>gi|150401914|ref|YP_001325680.1| flap endonuclease-1 [Methanococcus aeolicus Nankai-3]
gi|166973699|sp|A6UX46.1|FEN_META3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|150014617|gb|ABR57068.1| XPG I [Methanococcus aeolicus Nankai-3]
Length = 326
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 15/180 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL ++I I VFDG+ K T E+RRK K KA++ + + E +++
Sbjct: 68 LLNNEITPIWVFDGKPPELKLKTREERRK----VKEKASKDYEIAKREENIEDMQKYAKR 123
Query: 67 THKMALNVIQACRA----RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+ + N + C+ G+ I AP E +AQ A++ G A V+++D D L++GA +
Sbjct: 124 INYLEPNTVDNCKKLLKLMGIPYIDAPSEGEAQCAHMIKNGDAYCVVSQDYDALLYGAPR 183
Query: 123 IIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDY-WTGIKGMGLKKA 180
+ + S M+ E + L + + D M IL G DY GIKG+G KKA
Sbjct: 184 TVRNITASNKPLELMEIEDILKPLDISIDDLID-----MAILIGTDYNIGGIKGIGPKKA 238
>gi|145349446|ref|XP_001419144.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|317374919|sp|A4S1G4.1|FEN1_OSTLU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|144579375|gb|ABO97437.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 389
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L IK I VFDG+ K R+ KR+ +A E + +++V V
Sbjct: 75 MLEAGIKPIYVFDGKPPVMKGGELAKRKDKREEAEAALKAAREAGNQEEVEKLSKRTVRV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + V++ GV AP EA+A A + AG V TED D L F A ++
Sbjct: 135 SKQHSQEVMKLASLLGVPVFEAPCEAEASCAAMCKAGLVWAVATEDMDTLTFAAPRLARN 194
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L + D +K+ + L + +F D MCIL GCDY I+G+G K A
Sbjct: 195 LMAPKSQDKPVLEFDYDKVLAGLGLTPEQFID-----MCILCGCDYCDTIRGIGPKTA 247
>gi|353235791|emb|CCA67798.1| probable DNA repair endonuclease rad2 [Piriformospora indica DSM
11827]
Length = 366
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K R ++R+ K + E + E + R+ V V
Sbjct: 39 MVENGIKPCYVFDGKPPELKSGVLAKRFERREEAKEEGDEAKEVGTTEEVEKFSRRQVRV 98
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ +VAP EA+AQ A L G +ED D L F + ++
Sbjct: 99 TKEHNEECRKLLGLMGIPVVVAPSEAEAQCAELARGGLVYGAGSEDMDTLTFNSPILLRH 158
Query: 127 LDLSGNCCFMDRE-KLPS---ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S N E LP+ L+M + +F + +CIL GCDY IKG+G K A
Sbjct: 159 LTFSENRKEPILEISLPAVLEGLEMDMPQFVE-----LCILLGCDYLEPIKGVGPKSA 211
>gi|299743075|ref|XP_001835524.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
gi|298405488|gb|EAU86309.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
Length = 422
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K+ R +KR+ K + E + + R++V V
Sbjct: 39 IVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGTAEDVDRFSRRTVKV 98
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R GV C++AP EA+AQ A L G +ED D L F A +
Sbjct: 99 TKQHNEECQKLLRLMGVPCVIAPSEAEAQCAELARGGKVYAAGSEDMDTLTFNAPILFRH 158
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S ++ E L M +++F D +CIL GCDY IKG+G K A
Sbjct: 159 LTFSEAKKQPISEINLEAALKGLDMDMSQFVD-----LCILLGCDYLEPIKGVGPKSA 211
>gi|375083121|ref|ZP_09730153.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
gi|374742207|gb|EHR78613.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
Length = 340
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK VFDG+ K+ E R + R+ + K E L EA+ + +++ V
Sbjct: 68 LMEAGIKPAYVFDGKPPEFKKKELEKRAEAREEAQEKWEEALARGDLEEAKKYAQRASKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + G+ + AP E +AQ AY+ G+ ++D D L+FG +++
Sbjct: 128 NEMLIEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGHVWASASQDYDSLLFGTPRLVRN 187
Query: 127 LDLSGNCCFMDREKLPS------------ALKMPLA--KFTDAKFRYMCILSGCDYW-TG 171
L ++G + KLP L+ L K T K + IL G DY G
Sbjct: 188 LTITG------KRKLPGKDIYVEVKPELIVLEEVLKELKITREKLVELAILVGTDYNPGG 241
Query: 172 IKGMGLKKAKDYVFSIMDP 190
IKG+G KKA + V DP
Sbjct: 242 IKGIGPKKALEIVKYSKDP 260
>gi|242091235|ref|XP_002441450.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
gi|317374865|sp|C5YUK3.1|FEN11_SORBI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|241946735|gb|EES19880.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
Length = 380
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR+ E + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDMKKEELAKRFSKREDATNDLKEAVEAGDKDAVEKLSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+A+ A L V +ED D L FGA + +
Sbjct: 135 TAQHNDDCKRLLRLMGVPVVEAPSEAEAECAALCKNDKVFAVASEDMDSLTFGAPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CIL GCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>gi|403347306|gb|EJY73073.1| hypothetical protein OXYTRI_05797 [Oxytricha trifallax]
Length = 1055
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ + APFEA++Q A+L I G D V+TEDSD+L+FGA+K+ + DR K
Sbjct: 766 GIPFVQAPFEAESQCAFLEINGLVDGVVTEDSDVLLFGARKVYRNI--------FDRNKF 817
Query: 142 PSALKMPLAKFTDAKFR----YMCILSGCDYWTGIKGMG 176
M + + R M + G DY G++G+
Sbjct: 818 AEKYDMKIIEREMGLDRDDLIKMALFMGSDYTMGVRGIA 856
>gi|261402763|ref|YP_003246987.1| flap endonuclease-1 [Methanocaldococcus vulcanius M7]
gi|261369756|gb|ACX72505.1| flap structure-specific endonuclease [Methanocaldococcus vulcanius
M7]
Length = 326
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K IH LL + I I VFDG KE T + RR ++ + K E + + E +
Sbjct: 64 KTIH-LLENDITPIWVFDGEPPKLKEKTRKMRRHMKEQAEEKMKEAMKKENLDEVAKFAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++ +T K+ N G+ + AP E +AQ +Y+ G V+++D D L++GA
Sbjct: 123 RASYLTPKIVDNCKYLLGLMGIPYVNAPSEGEAQASYMAKKGDVWAVVSQDYDSLLYGAP 182
Query: 122 KIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
+++ L + ++ + + L++ L D + IL G DY G+KG+G K+
Sbjct: 183 RVVRNLTTTKEMPELINLDDVLEELRISLDDLID-----IAILMGTDYNPGGVKGIGFKR 237
Query: 180 AKDYVFS-----IMDPDFEN--ALRKI 199
A + V S ++ + EN +RKI
Sbjct: 238 AYELVKSGVAKDVLKKEVENYEEIRKI 264
>gi|426199083|gb|EKV49008.1| hypothetical protein AGABI2DRAFT_217997 [Agaricus bisporus var.
bisporus H97]
Length = 1160
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 34 RKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEAD 93
R D K E+ IL+ + ++ +R S D+T +M ++ R G+ I AP EA+
Sbjct: 751 RNLNDVQKEIDDEIKILN--DQRKAAMRDSEDITQQMISQIMTMLRLFGIPYITAPMEAE 808
Query: 94 AQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT 153
AQ A L G D VIT+DSD+ +FGA+++ + + L S L+ L
Sbjct: 809 AQCAELVSLGLVDGVITDDSDVFLFGAQRVYKNMFNQSKTVEL---FLLSDLERELGLDR 865
Query: 154 DAKFRYMCILSGCDYWTGIKGMG 176
D R +L G DY G+ G+G
Sbjct: 866 DTLVRLAYLL-GSDYTDGLSGVG 887
>gi|356498232|ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
max]
Length = 1707
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ I+AP EA+AQ AYL + D V+T+DSD+L+FGA+ + + F DR+ +
Sbjct: 1034 GLPYIIAPMEAEAQCAYLELEKLVDGVVTDDSDVLLFGARSVYKNI-------FDDRKYV 1086
Query: 142 PSALKMPLAK---FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ + K T K M +L G DY G+ G+G+ A + V + + D
Sbjct: 1087 ETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1139
>gi|448546419|ref|ZP_21626583.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|448548406|ref|ZP_21627673.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
gi|448557600|ref|ZP_21632789.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445702872|gb|ELZ54812.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|445714157|gb|ELZ65924.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445714501|gb|ELZ66263.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
Length = 326
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHLRQS 63
H + + VFDG K+ RR++R+ +A+ E EA L ++
Sbjct: 73 HDLTPVFVFDGGVTEMKDDEVAKRREQREKAEARLEEAREAGDSVEAARMEARTQRLTET 132
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ T + L+++ V + AP E +AQ +Y+ G ADYV +ED D L+FGA
Sbjct: 133 IQDTSRELLSLLD------VPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYT 186
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L GN MD L L K T + + +L G D+ GI G+G K A
Sbjct: 187 LRQLTSKGNPELMD-------LDATLDKHGITHEQLVDIAMLCGTDFNEGITGIGPKTA 238
>gi|82231650|sp|Q5I4H3.1|FEN1_XIPMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57639537|gb|AAW55636.1| flap endonuclease-1 [Xiphophorus maculatus]
gi|57639539|gb|AAW55637.1| flap endonuclease-1 [Xiphophorus maculatus]
Length = 380
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + IK + VFDG+ K A E R ++R + A+ L ++ V V
Sbjct: 74 MLENGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAKAQELGEQENIDKFSKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + GV I AP EA+A A L G TED D L FG ++
Sbjct: 134 TKQHNDDCKKLLTLMGVPYIEAPCEAEASCAALVKEGKVFATATEDMDGLTFGTNVLLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K+P+ +F T +F +CIL GCDY IKG+
Sbjct: 194 LTAS------------EAKKLPVQEFHFNRILQDIGLTSEQFIDLCILLGCDYCGTIKGI 241
Query: 176 GLKKAKDYV 184
G K+A D +
Sbjct: 242 GPKRAIDLI 250
>gi|432911452|ref|XP_004078686.1| PREDICTED: probable flap endonuclease 1 homolog [Oryzias latipes]
Length = 343
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L H IK + VFDG+ K E R A+AA R A S R ++V
Sbjct: 62 FLEHDIKPVFVFDGKPPVEKLPLLEKR--------AEAAGWSRPLRTGIASSQTRDCLEV 113
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + V+QA P +A+ A L G A V +ED D L FGA +I +
Sbjct: 114 LKHLGVPVVQA-----------PGDAEGLCASLVREGRAHAVASEDMDTLPFGANVLIRQ 162
Query: 127 LDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L+ + ++ KL AL++ L + D +CIL GCDY I G+G K+A
Sbjct: 163 LNAKKDSEIVEYSLPKLLEALRISLEELVD-----LCILLGCDYCDKIPGLGPKRA 213
>gi|317374947|sp|A8NQC2.3|FEN1_COPC7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 458
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K+ R +KR+ K + E + + R++V V
Sbjct: 75 IVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGTAEDVDRFSRRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R GV C++AP EA+AQ A L G +ED D L F A +
Sbjct: 135 TKQHNEECQKLLRLMGVPCVIAPSEAEAQCAELARGGKVYAAGSEDMDTLTFNAPILFRH 194
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S ++ E L M +++F D +CIL GCDY IKG+G K A
Sbjct: 195 LTFSEAKKQPISEINLEAALKGLDMDMSQFVD-----LCILLGCDYLEPIKGVGPKSA 247
>gi|448602383|ref|ZP_21656439.1| flap endonuclease-1 [Haloferax sulfurifontis ATCC BAA-897]
gi|445747898|gb|ELZ99352.1| flap endonuclease-1 [Haloferax sulfurifontis ATCC BAA-897]
Length = 326
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAK------AAELLILDRGSEAQSHLRQS 63
H + + VFDG K+ RR++R+ + + A + + R L ++
Sbjct: 73 HDLTPVFVFDGGVTEMKDDEVAKRREQREKAEERLEAAREAGDAVEAARMEARTQRLTET 132
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ T + L+++ V + AP E +AQ +Y+ G ADYV +ED D L+FGA
Sbjct: 133 IQDTSRELLSLLD------VPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYT 186
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L GN MD L LAK T + + +L G D+ GI G+G K A
Sbjct: 187 LRQLTSKGNPELMD-------LDATLAKHDITYEQLVDIAMLCGTDFNEGITGIGPKTA 238
>gi|302772224|ref|XP_002969530.1| hypothetical protein SELMODRAFT_410274 [Selaginella moellendorffii]
gi|300163006|gb|EFJ29618.1| hypothetical protein SELMODRAFT_410274 [Selaginella moellendorffii]
Length = 454
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 69 KMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
+M + A G+ C+V+ EA+AQ A LN G+AD T DSD L+FGA K++YK D
Sbjct: 20 RMVEDATALATAFGIPCLVSLEEAEAQCAALNAMGFADACFTADSDALLFGA-KVVYK-D 77
Query: 129 LS-----GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+S + D K+ +A + + IL GCDY+ G+ G+G +KA+
Sbjct: 78 ISLKPGESHVVAYDMTKIRNAF-----GYGRNSLIALGILLGCDYFPGVHGLGPEKAQQI 132
Query: 184 V 184
V
Sbjct: 133 V 133
>gi|298675706|ref|YP_003727456.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
gi|298288694|gb|ADI74660.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
Length = 338
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I L+ IK + VFDG+ K T E R++ R++ K E EA + + S
Sbjct: 65 ITNLVEEDIKPVFVFDGKPPDFKTDTLEKRKQSRENANQKWNEAKEKGLTEEAYKYAQGS 124
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ ++ + + G+ + +P E +AQ A++ G ADYV ++D D L+FGA +
Sbjct: 125 ARIDDQILDDAKYLLESMGIPYLQSPSEGEAQAAHMVQKGDADYVGSQDYDALLFGAPHV 184
Query: 124 IYKLDLS------GNCCFMDR--EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
I L ++ G ++D E + + T +K + + G DY G++ +
Sbjct: 185 IRNLTITGKRKLPGKNTYIDLKPETIDMEENLKSMGITRSKLIDIALCVGTDYNKGLEKI 244
Query: 176 GLKKA------KDYVFSIMDPDFEN 194
G K+A D + SI+D +N
Sbjct: 245 GPKRALKLVKTHDSIKSIIDETGQN 269
>gi|408381751|ref|ZP_11179299.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
gi|407815682|gb|EKF86252.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
Length = 328
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK I VFDG+ K+ T++ RR+ ++ + + E L R +A+ +S +
Sbjct: 68 LVEKGIKPIYVFDGQSSALKKETQQKRREIKEESERRWKEALEEGRLDDARKFAVRSSRM 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ + + G+ I A E +AQ +Y+ G A V ++D D ++FGA +++
Sbjct: 128 FPEIVEGSKKLIKLMGIPYIQAKGEGEAQASYMVAQGDAWCVASQDYDCMLFGAPRMVKN 187
Query: 127 LDLSGNCC---FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +SG ++ K+ L + + D + I+ G D+ GIKG+G KK
Sbjct: 188 LTISGTQKTPEIIELNKILENLSITREQLVD-----LAIMVGTDFNQGIKGIGAKKG 239
>gi|409077739|gb|EKM78104.1| hypothetical protein AGABI1DRAFT_61094 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1128
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 34 RKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEAD 93
R D K E+ IL+ + ++ +R S D+T +M ++ R G+ I AP EA+
Sbjct: 719 RNLNDVQKEIDDEIKILN--DQRKAAMRDSEDITQQMISQIMTMLRLFGIPYITAPMEAE 776
Query: 94 AQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT 153
AQ A L G D VIT+DSD+ +FGA+++ + + L S L+ L
Sbjct: 777 AQCAELVSLGLVDGVITDDSDVFLFGAQRVYKNMFNQSKTVEL---FLLSDLERELGLDR 833
Query: 154 DAKFRYMCILSGCDYWTGIKGMG 176
D R +L G DY G+ G+G
Sbjct: 834 DTLVRLAYLL-GSDYTDGLSGVG 855
>gi|448352039|ref|ZP_21540831.1| flap endonuclease-1 [Natrialba taiwanensis DSM 12281]
gi|445631838|gb|ELY85062.1| flap endonuclease-1 [Natrialba taiwanensis DSM 12281]
Length = 316
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKR-------DSHKAKAAELLILDRGSEAQSHLRQ 62
+ + +MVFDG KE E RR +R ++ + + E+ I S Q L
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRRDQRRTYEEQLETAREEGDEVAIAQLESRTQ-RLTP 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
++ T + L ++ V + AP E +AQ A++ G ADYV +ED D L+FGA
Sbjct: 131 TIQETSRELLQLLD------VPIVEAPAEGEAQAAHMARRGDADYVGSEDYDALLFGAPL 184
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L G+ MD + + L + DA IL G D+ G+ G+G K A
Sbjct: 185 TLRQLTSKGDPERMDLQATLDHHDLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|126344550|ref|XP_001362314.1| PREDICTED: flap endonuclease 1-like [Monodelphis domestica]
Length = 380
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K R ++R + + + L EA ++ V V
Sbjct: 74 MVENGIKPVYVFDGKPPQLKSGELAKRGERRAEAERQLQQALDAGAQEEADKFSKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + Q R G+ + AP EA+A A L AG TED D L FG+ ++
Sbjct: 134 TKEHNDECKQLLRLMGIPYLEAPGEAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K+P+ +F T +F +CIL G DY I+G+
Sbjct: 194 LTAS------------EAKKLPIQEFHLSRVLQGLGLTQEQFVDLCILLGSDYCESIRGI 241
Query: 176 GLKKAKDYV 184
G K+A D +
Sbjct: 242 GPKRAIDLI 250
>gi|145514173|ref|XP_001442997.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124467070|sp|A0CXT3.1|FEN11_PARTE RecName: Full=Flap endonuclease 1-1; Short=FEN-1-1; AltName:
Full=Flap structure-specific endonuclease 1-1
gi|124410358|emb|CAK75600.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR--QSV 64
L + IK + VFDG+ P + E R+K+ +A+ L L++G Q+ L+ ++
Sbjct: 78 FLENGIKPVWVFDGK--PPLLKSGELARRKKLKEEAQVKTELALEQGDMQQALLQHQRTT 135
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++ M + I+ + G I+AP EA+AQ A L AG TED D L F ++
Sbjct: 136 TISSVMKEDAIKMLKLMGCPVIIAPCEAEAQCAELCRAGKIYATATEDMDALTFRTPVLL 195
Query: 125 YKLDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ + + + + L++ +F D +CIL GCDY I+G+G
Sbjct: 196 RGFNTKKEPIYEIIYDDMMKELEITYEQFVD-----LCILCGCDYTEKIEGIG 243
>gi|221485216|gb|EEE23506.1| exonuclease, putative [Toxoplasma gondii GT1]
Length = 262
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+ I +L + ++ +VFDG L AK E RR R H A A + A H
Sbjct: 89 LGKIRLLTSFGVRPFLVFDGGQLEAKAPANESRRLTRRRHAALALAAHRAGDVANAWRHA 148
Query: 61 RQSVDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
++ V+ + V + + +GV CI A +EADAQMA L G+AD V+TED DLL +
Sbjct: 149 VGAISVSLSLRNFVFRNLQGHQGVVCISAAYEADAQMARLVADGFADAVLTEDGDLLAYQ 208
Query: 120 AKKI 123
A+ +
Sbjct: 209 ARMV 212
>gi|321473340|gb|EFX84308.1| hypothetical protein DAPPUDRAFT_47502 [Daphnia pulex]
Length = 374
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 27/191 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQSV 64
++ + IK + VFDG+ K R +KR+ +A +L D G E + ++ V
Sbjct: 74 MVDNGIKPVYVFDGKPPDMKGGELTKRAEKRE--EASKQLVLATDAGDAVEMEKMNKRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
V Q G+ + AP EA+AQ A L AG TED D L FG+ ++
Sbjct: 132 KVNKGHTDECKQLLTLMGIPYVEAPCEAEAQCAALVKAGKVYATATEDMDSLTFGSNVLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIK 173
L S A KMP+ +F T +F +CI+ GCDY IK
Sbjct: 192 RYLTYS------------EAKKMPIKEFHLDKILDGLSYTMDEFIDLCIMLGCDYCDTIK 239
Query: 174 GMGLKKAKDYV 184
G+G K+AK+ +
Sbjct: 240 GIGAKRAKELI 250
>gi|237842321|ref|XP_002370458.1| XPG N-terminal domain containing protein [Toxoplasma gondii ME49]
gi|211968122|gb|EEB03318.1| XPG N-terminal domain containing protein [Toxoplasma gondii ME49]
gi|221502590|gb|EEE28310.1| flap endonuclease-1, putative [Toxoplasma gondii VEG]
Length = 268
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I +L + ++ +VFDG L AK E RR R H A A + A H +
Sbjct: 92 IRLLTSFGVRPFLVFDGGQLEAKAPANESRRLTRRRHAALALAAHRAGDVANAWRHAVGA 151
Query: 64 VDVTHKMALNVIQACRA-RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+ V+ + V + + +GV CI A +EADAQMA L G+AD V+TED DLL + A+
Sbjct: 152 ISVSLSLRNFVFRNLQGHQGVVCISAAYEADAQMARLVADGFADAVLTEDGDLLAYQARM 211
Query: 123 I 123
+
Sbjct: 212 V 212
>gi|195579938|ref|XP_002079813.1| GD21819 [Drosophila simulans]
gi|194191822|gb|EDX05398.1| GD21819 [Drosophila simulans]
Length = 119
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAE L L EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAEFLRLVGIEEARSHM 119
>gi|34558672|gb|AAQ75078.1| RAD2 [Cryptosporidium parvum]
Length = 1147
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++T +M + +A G+ I +P EA+AQ + L V+++DSD L+FGAKKI
Sbjct: 874 EITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLNICHGVLSDDSDCLIFGAKKIF 933
Query: 125 YKLDLSGNCCFM-DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
SGN M D ++ L + +F + IL GCDY G+ G+G
Sbjct: 934 RNF-FSGNSVEMYDLNQVKKYLGIE----KQEQFYILAILLGCDYTVGVNGIG 981
>gi|256810959|ref|YP_003128328.1| flap endonuclease-1 [Methanocaldococcus fervens AG86]
gi|256794159|gb|ACV24828.1| flap structure-specific endonuclease [Methanocaldococcus fervens
AG86]
Length = 326
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K IH LL + I I VFDG KE T + R++ ++ + K E + + EA + +
Sbjct: 64 KTIH-LLENDITPIWVFDGEPPKLKEKTRKFRKEMKEKAELKMKEAIEKEDFEEAAKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ +T K+ N G+ + AP E +AQ +Y+ G V+++D D L++GA
Sbjct: 123 RVSYLTPKIVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYGAP 182
Query: 122 KIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
+++ L + ++ ++ L++ L D + I G DY G+KG+G K+
Sbjct: 183 RVVRNLTTTKEMPELIELNEVLEDLRISLDDLID-----IAIFIGTDYNPGGVKGIGFKR 237
Query: 180 AKDYVFS 186
A + V S
Sbjct: 238 AYELVRS 244
>gi|67589751|ref|XP_665434.1| RAD2 [Cryptosporidium hominis TU502]
gi|54656123|gb|EAL35205.1| RAD2 [Cryptosporidium hominis]
Length = 1158
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++T +M + +A G+ I +P EA+AQ + L V+++DSD L+FGAKKI
Sbjct: 885 EITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLNICHGVLSDDSDCLIFGAKKIF 944
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
SGN M + +K L +F + IL GCDY G+ G+G
Sbjct: 945 RNF-FSGNSVEMYD---LNQVKKYLGIEKQEQFYILAILLGCDYTVGVNGIG 992
>gi|66356946|ref|XP_625651.1| XPG, DNA excision repair protein, flap endonuclease
[Cryptosporidium parvum Iowa II]
gi|46226699|gb|EAK87678.1| XPG, DNA excision repair protein, flap endonuclease
[Cryptosporidium parvum Iowa II]
Length = 1147
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++T +M + +A G+ I +P EA+AQ + L V+++DSD L+FGAKKI
Sbjct: 874 EITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLNICHGVLSDDSDCLIFGAKKIF 933
Query: 125 YKLDLSGNCCFM-DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
SGN M D ++ L + +F + IL GCDY G+ G+G
Sbjct: 934 RNF-FSGNSVEMYDLNQVKKYLGIE----KQEQFYILAILLGCDYTVGVNGIG 981
>gi|385805407|ref|YP_005841805.1| flap endonuclease-1 [Fervidicoccus fontis Kam940]
gi|383795270|gb|AFH42353.1| flap endonuclease-1 [Fervidicoccus fontis Kam940]
Length = 350
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 9/183 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK I VFDG KE E RRK ++ K + ++ EA+ + + S +
Sbjct: 74 LIEAGIKPIYVFDGLPPSLKEKELEKRRKVKEEAAKKYQVAIAEEKYEEARKYAQISTRL 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+M I+ A G+ + AP E +AQ AY+ G ++D D ++FG+ +++
Sbjct: 134 NDEMVKEAIKLLDAMGLPTVQAPAEGEAQAAYMAKKGDVWSSGSQDYDSILFGSPRVVRN 193
Query: 127 LDLSGNC------CFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L +SG ++D E + S + K + I+ G DY GIKG+G+
Sbjct: 194 LTVSGKRKLPKKDVYIDIKPEVIESNVIYEKLGINREKLIIIGIMLGTDYNPDGIKGVGI 253
Query: 178 KKA 180
K A
Sbjct: 254 KTA 256
>gi|124800975|ref|XP_001349570.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
gi|3845138|gb|AAC71842.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
Length = 1516
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ ++++ +M ++ G+ I +P EA+AQ +YLN Y D +I++DSD+LVF
Sbjct: 1202 KNNIEINDEMNDDIKLLLNFFGIPYIQSPCEAEAQCSYLNNKNYCDAIISDDSDVLVFSG 1261
Query: 121 KKIIYKLDLSGNCCFMDREKL-----PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
K +I F +++K A++ L + + + +L GCDY G+ G+
Sbjct: 1262 KTVIKN--------FFNKKKTVEVYEKKAIEEKLGLYQEELIN-ISLLCGCDYTIGVHGI 1312
Query: 176 GLKKAKDYVFSIMDPDFEN--ALRKI--NVYGKIGS--YVKITKEFLTSFHNTNLMFLY 228
G+ A + + + P+FE+ L+ I N + KI Y + ++FL + N L +++
Sbjct: 1313 GIVNALEIIKAF--PNFEDLKILKDIVSNPFRKIDKNMYNEEIQQFLNTHKNYKLNWIF 1369
>gi|448365125|ref|ZP_21553668.1| flap endonuclease-1 [Natrialba aegyptia DSM 13077]
gi|445656129|gb|ELZ08969.1| flap endonuclease-1 [Natrialba aegyptia DSM 13077]
Length = 325
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKR-------DSHKAKAAELLILDRGSEAQSHLRQ 62
+ + +MVFDG KE E RR +R ++ + + E+ I S Q L
Sbjct: 72 NDVTPVMVFDGGPSELKEDEIESRRDQRRTYEEQLETAREEGDEVAIAQLESRTQ-RLTP 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
++ T + L ++ V + AP E +AQ A++ G ADYV +ED D L+FGA
Sbjct: 131 TIQETSRELLELLD------VPIVEAPAEGEAQAAHMARRGDADYVGSEDYDALLFGAPL 184
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L G+ MD + + L + DA IL G D+ G+ G+G K A
Sbjct: 185 TLRQLTSKGDPERMDLQATLDHHGLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|317374918|sp|C1BM18.1|FEN1_OSMMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|225708450|gb|ACO10071.1| Flap endonuclease 1-B [Osmerus mordax]
Length = 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 31/193 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL----RQ 62
+L + IK + VFDG+ P ++ E ++R +R +A+A +LL + + Q ++ ++
Sbjct: 74 MLENGIKPVYVFDGKP-PQLKSGELEKRGER---RAEAEKLLAQAQEAGEQENIDKFSKR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + GV + AP EA+A A L AG TED D L FG
Sbjct: 130 LVKVTRQHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFATATEDMDGLTFGTGV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A K+P+ +F + +F +CIL GCDY
Sbjct: 190 LLRHLTAS------------EAKKLPIQEFHFSRILQDIGLSHEQFIDLCILLGCDYCGT 237
Query: 172 IKGMGLKKAKDYV 184
IKG+G K+A D +
Sbjct: 238 IKGIGPKRAMDLI 250
>gi|126179869|ref|YP_001047834.1| flap endonuclease-1 [Methanoculleus marisnigri JR1]
gi|166973702|sp|A3CWV2.1|FEN_METMJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|125862663|gb|ABN57852.1| flap endonuclease 1 [Methanoculleus marisnigri JR1]
Length = 333
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAEL--LILDRGSEAQSHLRQSV 64
L I+ + VFDG+ K+ T +RR+ H+A+A E L G +++ + S
Sbjct: 69 FLEKGIRPVFVFDGKPPEFKQETINERRE----HRARADEAWKTALREGDMEEAYKQASA 124
Query: 65 DVTHKMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ ++ + I + R G+ + AP E +AQ AY+ G Y +++D D L+FG+
Sbjct: 125 --SARIDSHTIASSRELLDLLGIPWVQAPSEGEAQAAYMARQGKVTYAVSQDYDSLLFGS 182
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTD------AKFRYMCILSGCDYWTGIKG 174
++ L +SG R + ++ L+ F D + + IL G D+ GI+G
Sbjct: 183 PVLVRNLTVSGRRKTRGRTITVNPERIVLSSFLDRLGVTREQLVKIGILVGTDFNPGIRG 242
Query: 175 MGLKKA 180
+G K A
Sbjct: 243 VGGKTA 248
>gi|255721529|ref|XP_002545699.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
gi|240136188|gb|EER35741.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
Length = 963
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + R G+ I AP EA+AQ A L G D ++T+DSD
Sbjct: 692 QKAKRDSDEVTEAMINDVQELLRRFGIPFITAPMEAEAQCAELFRIGLVDGIVTDDSDCF 751
Query: 117 VFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+FG K IYK C+M + + KM L T K + +L G DY GIK
Sbjct: 752 LFGGDK-IYKNMFDQKQYVECYMQDD---LSTKMGL---TRKKLIELALLLGSDYTEGIK 804
Query: 174 GMG 176
G+G
Sbjct: 805 GIG 807
>gi|48477300|ref|YP_023006.1| flap endonuclease-1 [Picrophilus torridus DSM 9790]
gi|73919351|sp|Q6L2I9.1|FEN_PICTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|48429948|gb|AAT42813.1| RAD-2/FEN-1 exonuclease [Picrophilus torridus DSM 9790]
Length = 338
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL + IK + VFDG+ K T +R ++ + K E + + ++ +S + +
Sbjct: 68 LLENNIKPVYVFDGKPFHLKSETLRERSLIKEKNIMKLEEAIASNDDAKIRSLSSRINYI 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + G+ + AP E +AQ +Y+ + G + V+++D D L+FGAK+I+
Sbjct: 128 TDDIVNESKTLLNLMGLPYVQAPSEGEAQASYMTLKGDVNAVVSQDYDCLLFGAKRILRN 187
Query: 127 LDLSG--------NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ G ++ E + + + + Y+ IL+G D+ G+KG+G K
Sbjct: 188 FTVYGRRRIAGTSRTINVNPEIIDLNENLSNLGISREQLIYIGILTGTDFNPGVKGIGAK 247
Query: 179 KA 180
A
Sbjct: 248 TA 249
>gi|388583596|gb|EIM23897.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 433
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K + R +KR+ + E R++V V
Sbjct: 75 MVDNGIKPCYVFDGKPPDLKSNVLKSRFEKREDATEQGEEAKETGDAETIDRLSRRTVRV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R G+ + AP EA+AQ A L G +ED D L FGA ++
Sbjct: 135 TKEHNMECRKLLRLMGIPVVEAPSEAEAQCAELVRGGKVWAAGSEDMDTLTFGAPILLRH 194
Query: 127 LDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L F +++K P + L+M +FTD +CIL GCDY +KG+G
Sbjct: 195 L------TFSEQKKEPISHYYLEEALTGLEMGREQFTD-----LCILLGCDYLEPVKGVG 243
>gi|326527491|dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1503
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 50 LDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVI 109
+D G+E + + V+ +M + + G+ I+AP EA+AQ AY+ I D V+
Sbjct: 855 VDLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEINNLVDGVV 914
Query: 110 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKFRYMCILSGC 166
T+DSD+ +FGA+ + + F DR+ + + L + T + M +L G
Sbjct: 915 TDDSDVFLFGARNVYKNI-------FDDRKYVETYLMKDIESELGLTREQLIRMAMLLGS 967
Query: 167 DYWTGIKGMGLKKAKDYVFSIMDPD 191
DY GI G+G+ A + V + + D
Sbjct: 968 DYTEGISGIGIVNAIEVVHAFPEED 992
>gi|255543058|ref|XP_002512592.1| flap endonuclease-1, putative [Ricinus communis]
gi|223548553|gb|EEF50044.1| flap endonuclease-1, putative [Ricinus communis]
Length = 345
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 14 VIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALN 73
+++ G + EA E +R + A + + + +++V VT + +
Sbjct: 44 IVVGRSGTEMLTNEAGEVTSYSRRADATEELAAAVETGNKEDIEKFSKRTVKVTKQHNED 103
Query: 74 VIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNC 133
+ R GV I AP EA+A+ A L +G V +ED D L FGA + + L
Sbjct: 104 CKRLLRLMGVPVIEAPSEAEAECAALCKSGKVYAVASEDMDSLTFGAPRFLRHL------ 157
Query: 134 CFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGMG 176
MD PS+ K+P+ +F +K F +CILSGCDY I+G+G
Sbjct: 158 --MD----PSSRKVPVMEFETSKILEELNLTMDQFIDLCILSGCDYCDSIRGIG 205
>gi|350417449|ref|XP_003491427.1| PREDICTED: DNA repair protein complementing XP-G cells-like [Bombus
impatiens]
Length = 1107
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
RQ +D++ ++ + + R G+ I+AP EA+AQ AYL D IT+DSD+ +FG
Sbjct: 729 RQGIDISDQIQIEAQELLRLFGIPYIIAPMEAEAQCAYLEQIHLIDGTITDDSDIWLFGG 788
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK N ++ S K T + + +L G DY TG+ G+G
Sbjct: 789 -QCVYKNFFDNNKKVLE---FRSCDIQHYFKLTRNEMIRLALLVGSDYTTGLTGIG 840
>gi|302810129|ref|XP_002986756.1| hypothetical protein SELMODRAFT_425660 [Selaginella moellendorffii]
gi|300145410|gb|EFJ12086.1| hypothetical protein SELMODRAFT_425660 [Selaginella moellendorffii]
Length = 336
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 69 KMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
+M + A G+ C+V+ EA+AQ A LN G+AD T DSD L+FGA K++YK D
Sbjct: 20 RMVEDATALATAFGIPCLVSLEEAEAQCAALNAMGFADACFTADSDALLFGA-KVVYK-D 77
Query: 129 LS-----GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+S + D K+ +A + + IL GCDY+ G+ G+G +KA+
Sbjct: 78 ISLKPGESHVVAYDMTKIRNAF-----GYGRNSLIALGILLGCDYFPGVHGLGPEKAQQI 132
Query: 184 V 184
V
Sbjct: 133 V 133
>gi|388854784|emb|CCF51677.1| probable DNA repair endonuclease rad2 [Ustilago hordei]
Length = 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 21/130 (16%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V T + V + G+ C++AP EA+AQ A L AG +ED D L FG
Sbjct: 129 RRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDMDTLTFGT 188
Query: 121 KKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWT 170
++ L S +++KLP L M +A+F D +CIL GCDY
Sbjct: 189 PILLKHLTAS------EQKKLPVHQVDLPKALEGLGMDMAQFID-----LCILLGCDYLD 237
Query: 171 GIKGMGLKKA 180
IKG+G K A
Sbjct: 238 PIKGIGPKTA 247
>gi|430813459|emb|CCJ29208.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
I+ VFDG K R ++R+ E D + R++V +T +
Sbjct: 80 IRPCYVFDGTPPKLKSGELAKRSERREKAAKSYLEAKEADSIEDMNKFSRRTVRMTREHN 139
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
+ + G+ + AP EA+AQ A L AG +ED D+L F ++ L S
Sbjct: 140 EECKKLLKLMGIPYVDAPCEAEAQCAALAKAGKVYAAASEDMDILCFSTPILLRHLTFSE 199
Query: 132 N----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
++ EK L MPL +F D +CIL GCDY IKG+G K+A + +
Sbjct: 200 QKKEPITEVNLEKALKELNMPLEQFVD-----LCILLGCDYCEPIKGIGPKRALELI 251
>gi|168066677|ref|XP_001785260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374868|sp|A9U328.1|FEN12_PHYPA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|162663130|gb|EDQ49912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L +K + VFDG+ K R +R+ A + ++ + + +++V V
Sbjct: 75 VLEAGLKPVYVFDGKPPEMKGGELAKRLARREEAVESLATAKLEGNEADMEKYSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+A+ A L G V +ED D L FG+ + +
Sbjct: 135 TKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKTGKVYAVASEDMDSLTFGSTRFLRH 194
Query: 127 L--DLSGNCCFM--DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +S M D K+ L + + +F D +CIL GCDY I+G+G + A
Sbjct: 195 LMEPVSRKLPVMEFDMNKVLEGLSLTMDQFVD-----LCILCGCDYIDTIRGIGAQTA 247
>gi|118596596|dbj|BAF37957.1| flap endonuclease-1 [Thermoplasma sp. S01]
Length = 336
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD- 65
LL +KI+ + VFDG+ P K T +R+ ++ K + E ++RG E ++
Sbjct: 68 LLENKIRPVYVFDGKPSPLKNRTISERQLMKEKAKVELEEA--IERGEEDLRQYYSRINY 125
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T ++ + + G+ + AP E +AQ +Y+ D VI++D D L+FGA+K++
Sbjct: 126 ITPQIVNDTKKLLDYMGIPYVDAPSEGEAQASYMTRKN-VDGVISQDYDCLLFGARKVLR 184
Query: 126 KLDLSGNCCFMDREKLPSA------------LKMPLA--KFTDAKFRYMCILSGCDYWTG 171
+ G R K+P L L+ + + + IL G D+ G
Sbjct: 185 NFAIYG------RRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEG 238
Query: 172 IKGMGLKKA 180
IKG+G KKA
Sbjct: 239 IKGIGAKKA 247
>gi|52549222|gb|AAU83071.1| DNA repair protein [uncultured archaeon GZfos26E7]
Length = 339
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ +K++ VFDG K AT E RRK RD+ + E L R +A + + + +
Sbjct: 69 LVEAGLKLVFVFDGVPPDFKAATIEKRRKIRDTADREWKEALAAGR-EDAFKYAQATSRL 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+M + + G+ + A E +AQ A + +G +V ++D D L+FGA +++
Sbjct: 128 QPEMVADAKSLLTSMGIPVVEAASEGEAQAARMARSGDVRFVGSQDYDSLLFGAPEVVRN 187
Query: 127 LDLSGNCCFMDREKLPSA-----LKMPLAKF---------TDAKFRYMCILSGCDYWTGI 172
L + G + KLP +K+ + + T + + IL G DY GI
Sbjct: 188 LAVGG------KRKLPGKNVYVDVKLEIIELQPNLDRLGITQEQLIDIAILVGTDYDPGI 241
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
G+G KK AL+ I +G I + I E + FL V
Sbjct: 242 HGIGAKK---------------ALQLIYKHGSIEDALPILGESIEHLDEIKNFFLNPDVT 286
Query: 233 DPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWN 289
D S + P ES++ + + + E+ + K A + + D S +D W+
Sbjct: 287 DDYS--LTWKKPDESKIAELLCHEHGFSEVRVAK--AVERLVRASDSMSQSTLDMWS 339
>gi|348688657|gb|EGZ28471.1| hypothetical protein PHYSODRAFT_294028 [Phytophthora sojae]
Length = 390
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 24/256 (9%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
++ + +K + VFDG+ P ++ E +R R KA E +E ++ V
Sbjct: 80 MMENGLKPVYVFDGKP-PVMKSGELAKRSDRRQEAQKALEEATEKGNAEDIDRFNKRLVR 138
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
T + + + R GV I AP EA+A A L G TED D L FG +
Sbjct: 139 ATPQHNEDCKELLRLMGVPHITAPCEAEASCAELAKGGRVYAAGTEDMDALTFGVPVLYR 198
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAK------FTDAKFRYMCILSGCDYWTGIKGMGLKK 179
+L +S +K+P L++ L + T +F +CIL GCDY I+G+G KK
Sbjct: 199 RLTVS------PAKKIP-ILEIRLERALQELELTQEQFVDLCILCGCDYCDSIRGVGPKK 251
Query: 180 AKDYVFSIMD-PDFENALRKINVYGKIGSYVKITKEFLTS---FHNTNLMFLYQPVYDPV 235
A + + +F AL+K G V I E+L + + MF+ V +
Sbjct: 252 AFAGIKEHKNIENFLEALQKNKSKG-----VVIPDEWLGENPIYKSAREMFIKPEVVNAK 306
Query: 236 SKEVVPLNPLESEMRD 251
E+ +P E+E+ D
Sbjct: 307 EAELKWRDPQETELLD 322
>gi|449446847|ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
Length = 1541
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 40 HKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYL 99
H+ E L+ G E + R + V +M + + G+ I+AP EA+AQ AY+
Sbjct: 858 HRISVLEQERLNLGDEQKRLERNAESVNSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 917
Query: 100 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS----ALKMPLAKFTDA 155
+A D V+T+DSD+ +FGA+ + + F DR+ + + ++ L D
Sbjct: 918 ELANLVDGVVTDDSDVFLFGARSVYKNI-------FDDRKYVETYFMKDIEHELGLNRD- 969
Query: 156 KFRYMCILSGCDYWTGIKGMGLKKA 180
K M +L G DY G+ G+G+ A
Sbjct: 970 KLIQMALLLGSDYTEGVSGIGIVNA 994
>gi|448600910|ref|ZP_21656289.1| flap endonuclease-1 [Haloferax alexandrinus JCM 10717]
gi|445734923|gb|ELZ86479.1| flap endonuclease-1 [Haloferax alexandrinus JCM 10717]
Length = 326
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H + + VFDG K+ D KR + KA E L R + + + T +
Sbjct: 73 HDLTPVFVFDGGVTEMKD----DEVAKRREQREKAEERLEAAREAGDAAEAARMEARTQR 128
Query: 70 MALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + R V + AP E +AQ +Y+ G ADYV +ED D L+FGA +
Sbjct: 129 LTETIQDTSRELLSLFDVPVVEAPAEGEAQASYMARTGDADYVGSEDYDTLLFGAPYTLR 188
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L GN MD L L K T + + +L G D+ GI G+G K A
Sbjct: 189 QLTSKGNPELMD-------LDATLDKHDITHEQLVDIAMLCGTDFNEGITGIGPKTA 238
>gi|449543076|gb|EMD34053.1| hypothetical protein CERSUDRAFT_107818 [Ceriporiopsis subvermispora
B]
Length = 1202
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 55 EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
+ ++ +R S DVT +M ++ R G+ I AP EA+AQ A L G D +IT+DSD
Sbjct: 801 QKKAAMRDSEDVTQQMVSQIMVMLRLFGIPYITAPMEAEAQCAELLTLGLVDGIITDDSD 860
Query: 115 LLVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+ +FG ++++ + C++ LP L L D R +L G DY G+
Sbjct: 861 VFLFGGQRVLKNMFNQSKTVECYL----LPD-LDRELGLDRDKLIRLAYLL-GSDYTEGL 914
Query: 173 KGMG 176
G+G
Sbjct: 915 PGVG 918
>gi|449016220|dbj|BAM79622.1| probable flap structure-specific endonuclease 1 [Cyanidioschyzon
merolae strain 10D]
Length = 380
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKE-ATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
LL IK I VFDG+ L A E A RR++ + AKA E L+ ++ + R+
Sbjct: 75 LLELGIKPIYVFDGKAPDLKANELAKRRSRREEDEQAAAKAREEGDLELYAK---YARRV 131
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V+ + NV + R G+ + AP EA+AQ A L AG A +ED D L FG +
Sbjct: 132 NKVSAETIDNVKRLLRLMGIPVVEAPSEAEAQCAVLTRAGLAYATASEDMDALTFGTPLL 191
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLA----KFTDAKFRYMCILSGCDYWTGIKGMGLKK 179
I L + +++ PS + + + +F +CIL GCDY I +G +
Sbjct: 192 IRNLFAALASGAERKDRKPSEFSLAITLEDLGISMDQFIDICILCGCDYTCTIPKIGPYR 251
Query: 180 A 180
A
Sbjct: 252 A 252
>gi|156836721|ref|XP_001642408.1| hypothetical protein Kpol_298p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156112928|gb|EDO14550.1| hypothetical protein Kpol_298p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1037
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT +M + V + G+ IVAP EA+AQ A L + D +IT+DSD+ +FG
Sbjct: 767 RDSDEVTPEMVIAVQELLSRFGIPYIVAPMEAEAQCAELLLLKLVDGIITDDSDVFLFGG 826
Query: 121 KKIIYK--LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
K IYK F D + + S L + D + +L G DY G+KG+G
Sbjct: 827 AK-IYKNMFQEKKYVEFYDVQSINSNLALDRKNMID-----LALLLGSDYTNGVKGLG 878
>gi|448362827|ref|ZP_21551431.1| flap endonuclease-1 [Natrialba asiatica DSM 12278]
gi|445647449|gb|ELZ00423.1| flap endonuclease-1 [Natrialba asiatica DSM 12278]
Length = 291
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKR-------DSHKAKAAELLILDRGSEAQSHLRQSVDVT 67
+MVFDG KE E RR +R ++ + + E+ I S Q L ++ T
Sbjct: 77 VMVFDGGPSELKEDEIESRRDQRRTYEEQLETAREEGDEVAIAQLESRTQ-RLTPTIQET 135
Query: 68 HKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKL 127
+ L ++ V + AP E +AQ A++ G ADYV +ED D L+FGA + +L
Sbjct: 136 SRELLELLD------VPIVEAPAEGEAQAAHMARRGDADYVGSEDYDALLFGAPLTLRQL 189
Query: 128 DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
G+ MD + + L + DA IL G D+ G+ G+G K A
Sbjct: 190 TSKGDPERMDLQATLDHHGLTLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|297815070|ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321256|gb|EFH51677.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1463
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 46 ELLILDR-----GSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN 100
E+ +LD+ G E + R + V+ +M + + G+ I+AP EA+AQ A++
Sbjct: 891 EIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFME 950
Query: 101 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 157
+ D ++T+DSD+ +FGA+ +YK F DR+ + + + K + K
Sbjct: 951 QSNLVDGIVTDDSDVFLFGARS-VYK------NIFDDRKYVETYFMKDIEKELGLSRDKI 1003
Query: 158 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
M +L G DY GI G+G+ A + V + + D
Sbjct: 1004 IRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEED 1037
>gi|390332710|ref|XP_001197560.2| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like
[Strongylocentrotus purpuratus]
Length = 384
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-RQSVD 65
++ H +K VFDG+ P ++ E +RK+ + K E E + ++ V
Sbjct: 74 MIEHGLKPCYVFDGKP-PEMKSGELTKRKEMRAEAEKELEKAKEQGDQENMNKFEKRLVK 132
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT + + GV + AP EA+AQ L G V TED D L FG ++
Sbjct: 133 VTKQHNEECQHLLKLMGVPYVKAPGEAEAQCCELVKKGKLYGVGTEDMDALTFGGNVLLR 192
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTGIKG 174
L +S A KMP+ +F +F +CIL GCDY IKG
Sbjct: 193 HLTVS------------EARKMPIQEFNYQRVLEGLGLNRQQFIDLCILMGCDYCGTIKG 240
Query: 175 MGLKKAKDYVFSIMDP--DFENALRKIN 200
+G+K+A F +M E L KI+
Sbjct: 241 IGMKRA----FELMKTHGSIETILEKID 264
>gi|405953608|gb|EKC21238.1| Flap endonuclease 1-A [Crassostrea gigas]
Length = 376
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
++ + IK + VFDG+ P ++ E +RK+R K L++ EA +
Sbjct: 74 MVENGIKPVYVFDGKP-PDMKSGELAKRKERREEAQKQ-----LEKAEEAGDEENIEKFN 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V V+ + + + G+ I AP EA+AQ A L AG TED D L FG
Sbjct: 128 RRLVKVSKQHNEECKELLKYMGIPFINAPGEAEAQCAALVKAGKVYATGTEDMDALTFGT 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L ++ A K+P+ ++ T +F +CIL GCDY
Sbjct: 188 TVLLRNLTVA------------EARKLPIKEYYYNRVLEELGLTKDEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
I+G+G K+A D +
Sbjct: 236 DSIRGIGPKRAIDLI 250
>gi|82914773|ref|XP_728841.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485391|gb|EAA20406.1| XPG I-region, putative [Plasmodium yoelii yoelii]
Length = 1274
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ I +P EA+AQ AYLN Y D +I++DSD++VF K II F +++K
Sbjct: 941 GIPYIQSPCEAEAQCAYLNNNNYCDAIISDDSDVIVFSGKTIIKN--------FFNKKKT 992
Query: 142 -----PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE--- 193
+ ++ L + D + +L GCDY G+ G+G+ A + + + P FE
Sbjct: 993 VEVYEKNLIERKLGLYQDDLIN-ISMLCGCDYTIGVHGVGIVNALEIIKAF--PTFEDLK 1049
Query: 194 -------NALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLY 228
N LR I +Y K FL S N L +++
Sbjct: 1050 FLKEIVSNPLRHIYQENYENNYSDEIKIFLNSHKNYKLNWIF 1091
>gi|403341860|gb|EJY70247.1| Flap endonuclease 1-1 [Oxytricha trifallax]
Length = 404
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLRQSV 64
+ + +K I VFDG+ P ++ D+RK+ + KA+ + ++D G A+ +S+
Sbjct: 79 FMENGVKPIWVFDGKP-PELKSYVLDQRKE-NKEKAEETKQTMIDAGDLEGAKRMAGRSI 136
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT +M + + R G + AP EA+AQ A + G A +ED D L FG ++
Sbjct: 137 RVTPEMMEDAKKLLRLMGTPVVEAPGEAEAQCAVIVKHGLAYATASEDMDSLTFGTNVLL 196
Query: 125 YKLDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 183
+ +D ++ + +F D +CIL GCDY T I G+G KA +
Sbjct: 197 RGFNSKKEPIIQIDLAQVLEGFNLNHEQFID-----LCILCGCDYTTNIPGVGPVKAFKF 251
Query: 184 VFSIMDPDFENALRKI 199
+ S EN + +I
Sbjct: 252 I-SEEGGTIENVISRI 266
>gi|118596598|dbj|BAF37958.1| flap endonuclease-1 [Thermoplasma sp. S02]
Length = 336
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD- 65
LL ++I+ + VFDG+ P K T +R+ ++ K + E ++RG E ++
Sbjct: 68 LLENRIRPVYVFDGKPSPLKNRTISERQLMKEKAKVELEEA--IERGEEDLRQYYSRINY 125
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T ++ + + G+ + AP E +AQ +Y+ D VI++D D L+FGA+KI+
Sbjct: 126 ITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKKN-VDGVISQDYDCLLFGARKILR 184
Query: 126 KLDLSGNCCFMDREKLPSA------------LKMPLA--KFTDAKFRYMCILSGCDYWTG 171
+ G R K+P L L+ + + + IL G D+ G
Sbjct: 185 NFAIYG------RRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEG 238
Query: 172 IKGMGLKKA 180
IKG+G KKA
Sbjct: 239 IKGIGAKKA 247
>gi|433418201|ref|ZP_20404929.1| flap endonuclease-1 [Haloferax sp. BAB2207]
gi|432199801|gb|ELK55943.1| flap endonuclease-1 [Haloferax sp. BAB2207]
Length = 326
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H + + VFDG K+ D KR + KA E L R + + + T +
Sbjct: 73 HDLTPVFVFDGGVTEMKD----DEVAKRREQREKAEERLEAAREAGDAAEAARMEARTQR 128
Query: 70 MALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + R V + AP E +AQ +Y+ G ADYV +ED D L+FGA +
Sbjct: 129 LTETIQDTSRELLSLFDVPVVEAPAEGEAQASYMARTGDADYVGSEDYDTLLFGAPYTLR 188
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L GN MD L L K T + + +L G D+ GI G+G K A
Sbjct: 189 QLTSKGNPELMD-------LDATLDKHDITHEQLVDIAMLCGTDFNEGITGIGPKTA 238
>gi|76802527|ref|YP_327535.1| flap endonuclease-1 [Natronomonas pharaonis DSM 2160]
gi|121696716|sp|Q3IPG8.1|FEN_NATPD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|76558392|emb|CAI49983.1| flap endonuclease Fen1 [Natronomonas pharaonis DSM 2160]
Length = 328
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H + + VFDG K E RR +R+ ++A+ D A+ +S T +
Sbjct: 73 HDVTPVFVFDGGVSDLKADEVEKRRDQRERYEAQLEAAKERDETDAAEIAALESR--TQR 130
Query: 70 MALNVIQACR---AR-GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ +++ R AR V + AP E +AQ A++ G ADYV +ED D L+ GA +
Sbjct: 131 LTDTIVETTRELLARLDVPVVEAPAEGEAQAAHMARRGDADYVGSEDYDALLLGAPYTLR 190
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +G+ MD E S + DA IL G D+ G+ G+G K A
Sbjct: 191 GLTSNGDPECMDFEATLSTHDLSWEGLVDA-----AILMGTDFNEGLSGVGPKTA 240
>gi|146090657|ref|XP_001466297.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|398017392|ref|XP_003861883.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
gi|317374906|sp|A4I2L4.1|FEN1_LEIIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134070659|emb|CAM69008.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|322500111|emb|CBZ35186.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
Length = 395
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 25/186 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKK-----RDSHKAK-AAELLILDRGSEAQSHL 60
++ IK I VFDG+ K E RR+K R+ KAK A + ++++ S+ +
Sbjct: 78 MIDEGIKPIYVFDGKPPKLKADELEMRRQKAAEAEREFEKAKDAGDDEMMEKMSKRTVRV 137
Query: 61 -RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
R +D + K+ R G+ I AP EA+AQ A L G A V TED D L FG
Sbjct: 138 SRDQIDESKKL-------LRLMGIPVIQAPSEAEAQCAELVKKGKAWAVGTEDMDALTFG 190
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSA-----LKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+ ++ L++S D +K P A + + + +F +CIL GCDY + G
Sbjct: 191 STVMLRHLNIS------DAKKRPIAEIHLDEVLQITGLSMGQFVDLCILLGCDYVPKVPG 244
Query: 175 MGLKKA 180
+G +KA
Sbjct: 245 IGPQKA 250
>gi|221053197|ref|XP_002257973.1| DNA repair endonuclease [Plasmodium knowlesi strain H]
gi|193807805|emb|CAQ38510.1| DNA repair endonuclease, putative [Plasmodium knowlesi strain H]
Length = 1431
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 26 KEATEEDRRKKRDSH-------KA-KAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQA 77
++ T DR K RDS KA K E L+ E + + ++++ +M ++
Sbjct: 1055 EDVTPNDREKVRDSRALDDYMEKANKENEELV----KEYRKLKKNNIEINEEMNEDIKIL 1110
Query: 78 CRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMD 137
G+ + +P EA+AQ +YLN Y D +I++DSD+LVF K +I +
Sbjct: 1111 LNMFGIPYVQSPCEAEAQCSYLNCKNYCDAIISDDSDVLVFNGKTVIKNFFNKKKTVEVY 1170
Query: 138 REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALR 197
KL ++ L + D + +L GCDY G+ G+G+ A + + + P FE+ L+
Sbjct: 1171 ERKL---IEDKLGLYQDELIN-LSLLCGCDYTIGVHGVGIVNALEIIKAF--PTFED-LK 1223
Query: 198 KI 199
K+
Sbjct: 1224 KL 1225
>gi|149390675|gb|ABR25355.1| endonuclease putative [Oryza sativa Indica Group]
Length = 262
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 23/131 (17%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V VT + + R GV + AP EA+A+ A L I V +ED D L FGA
Sbjct: 11 KRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDMDSLTFGA 70
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYW 169
+ + L MD PS+ K+P+ +F AK F +CILSGCDY
Sbjct: 71 PRFLRHL--------MD----PSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYC 118
Query: 170 TGIKGMGLKKA 180
IKG+G + A
Sbjct: 119 DSIKGIGGQTA 129
>gi|343427426|emb|CBQ70953.1| probable DNA repair endonuclease rad2 [Sporisorium reilianum SRZ2]
Length = 374
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 21/130 (16%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V T + V + G+ C++AP EA+AQ A L AG +ED D L FG
Sbjct: 129 RRQVRPTRQHNEEVRHLLKLMGIPCVIAPSEAEAQCAELARAGKVYAAGSEDMDTLTFGT 188
Query: 121 KKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWT 170
++ L S +++KLP L+M + +F D +CIL GCDY
Sbjct: 189 PILLKHLTAS------EQKKLPVHQVDLPKALEGLQMSMPQFID-----LCILLGCDYLD 237
Query: 171 GIKGMGLKKA 180
IKG+G K A
Sbjct: 238 PIKGIGPKTA 247
>gi|195030390|ref|XP_001988051.1| GH10954 [Drosophila grimshawi]
gi|193904051|gb|EDW02918.1| GH10954 [Drosophila grimshawi]
Length = 1183
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 54 SEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDS 113
+E R + ++ +M+ + + R G+ IVAP EA+AQ A+LN + IT+DS
Sbjct: 775 AERNRQDRMGMSISQRMSNDCQELLRLFGIPYIVAPMEAEAQCAFLNAVEITNGTITDDS 834
Query: 114 DLLVFGAKKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTG 171
D+ +FG + +YK + N ++ E++ +K + C++ G DY TG
Sbjct: 835 DIWLFGG-RTVYKNFFAQNKHVLEFRAEQIEQTFNCNRSKL----IQLACLV-GSDYTTG 888
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKINVYGK---------IGSYVKITKEFLTSFHNT 222
I G+G A + + S ++A ++ + + VK +++ S HN
Sbjct: 889 IHGIGAVTALEILASFTTSKLDSATTSLDTASNGSAITNQSVLSTLVKF-RDWWQSQHNA 947
Query: 223 NL 224
N+
Sbjct: 948 NI 949
>gi|18405624|ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog;
AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
AltName: Full=XPG homolog
gi|13649704|gb|AAK37472.1| UV hypersensitive protein [Arabidopsis thaliana]
gi|332643872|gb|AEE77393.1| DNA repair protein UVH3 [Arabidopsis thaliana]
Length = 1479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 46 ELLILDR-----GSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN 100
E+ +LD+ G E + R + V+ +M + + G+ I+AP EA+AQ A++
Sbjct: 896 EIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFME 955
Query: 101 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 157
+ D ++T+DSD+ +FGA+ +YK F DR+ + + + K + K
Sbjct: 956 QSNLVDGIVTDDSDVFLFGARS-VYK------NIFDDRKYVETYFMKDIEKELGLSRDKI 1008
Query: 158 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
M +L G DY GI G+G+ A + V + + D
Sbjct: 1009 IRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEED 1042
>gi|302845188|ref|XP_002954133.1| hypothetical protein VOLCADRAFT_82613 [Volvox carteri f.
nagariensis]
gi|300260632|gb|EFJ44850.1| hypothetical protein VOLCADRAFT_82613 [Volvox carteri f.
nagariensis]
Length = 254
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 15/187 (8%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKA---KAAELLILDRGSEAQS 58
+ I LL H+++ + VFDG K T RR++R++ + K AE L++ +
Sbjct: 22 RRICRLLFHRVRPVFVFDGATPALKRHTNIARRRRREAQQGVLRKTAEKLLI-------A 74
Query: 59 HLRQSVDVTHKMALNV-IQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLV 117
L++ +V + LNV I +GV + P A+AQ A+L ++G D V+T+D+D+ +
Sbjct: 75 QLKKQRNVGMPLKLNVAIPLAAFKGVPTVSEPAAAEAQCAFLEVSGLVDGVVTDDNDVFL 134
Query: 118 FGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
FGA+ +Y+ + N +++ ++ S ++ L T + M +L G DY G G+G+
Sbjct: 135 FGARH-VYR-HIFENKKYVEEYQM-SDVERELG-LTRERLAEMALLLGSDYTEGCGGIGI 190
Query: 178 KKAKDYV 184
A + V
Sbjct: 191 VNAVEVV 197
>gi|145343647|ref|XP_001416426.1| Exodeoxyribonuclease I [Ostreococcus lucimarinus CCE9901]
gi|144576651|gb|ABO94719.1| Exodeoxyribonuclease I [Ostreococcus lucimarinus CCE9901]
Length = 701
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 74 VIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN- 132
++ R RG +VAP E+D Q+ Y+ +G D+V+T+D+D +V G K+++K+ S +
Sbjct: 108 ILNEVRKRGFVYVVAPNESDHQLKYMESSGLVDFVLTDDTDAVVLGCAKVVHKVSWSVST 167
Query: 133 --CCFMDREKLPSALKMP------------LAKFTDAKFRYMCILSGCDYWTG-IKGMGL 177
C +R L+MP + DA R SGCDY G + G+G
Sbjct: 168 LKCNVFNRNN----LRMPVDTNEVNTVAELMCMHGDAAMRLWAAASGCDYREGKVPGLGP 223
Query: 178 KKA 180
+ A
Sbjct: 224 QTA 226
>gi|332796311|ref|YP_004457811.1| XPG I domain-containing protein [Acidianus hospitalis W1]
gi|332694046|gb|AEE93513.1| XPG I domain protein [Acidianus hospitalis W1]
Length = 344
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 106/243 (43%), Gaps = 28/243 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 63 LLEEGVIPIYVFDGKPPELKAQELERRRKIKEEAEKKLEKAKEEGETKELKKYSQMATRL 122
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T+ MA + A G+ + AP E +A+ AYL GY ++D D L+FGA K+I
Sbjct: 123 TNDMAEEGKRLLEAMGIPVVQAPSEGEAEAAYLCSQGYTWAAASQDYDSLLFGANKLIRN 182
Query: 127 LDLSGNCCFMDR----EKLPSALKMP--LAKF--TDAKFRYMCILSGCDY-WTGIKGMGL 177
L L+G + E P +++ L KF T + + IL G DY GIKG+G
Sbjct: 183 LTLTGKRKLPKKDVYVEIKPELIELEDLLKKFGITREQLVDIGILIGTDYDPDGIKGIGP 242
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYV---KITKEFL-TSFHNTNLMFLYQPVYD 233
ALR I YGKI V ++ K L + + +FL PV
Sbjct: 243 V---------------TALRIIKKYGKIEKAVEKGELPKYILDLNINEIRSIFLNPPVVK 287
Query: 234 PVS 236
P S
Sbjct: 288 PES 290
>gi|195454489|ref|XP_002074261.1| GK18419 [Drosophila willistoni]
gi|194170346|gb|EDW85247.1| GK18419 [Drosophila willistoni]
Length = 1247
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN + IT+DSD+ +FG
Sbjct: 861 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATELTNGTITDDSDIWLFGG 920
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N ++ E++ K + C++ G DY TGI G+G
Sbjct: 921 -RTVYKNFFAQNKHVLEFRSEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 972
>gi|5758316|gb|AAD50780.1|AF162793_1 XPG variant [Drosophila melanogaster]
Length = 1257
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 871 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 930
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N M+ E++ K + C++ G DY TGI G+G
Sbjct: 931 -RTVYKNFFAQNKHVMEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 982
>gi|448612021|ref|ZP_21662451.1| flap endonuclease-1 [Haloferax mucosum ATCC BAA-1512]
gi|445742782|gb|ELZ94276.1| flap endonuclease-1 [Haloferax mucosum ATCC BAA-1512]
Length = 326
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
H + + VFDG K+ D KR + KA E L R + + + T +
Sbjct: 73 HDLTPVFVFDGGVTDMKD----DEVAKRREQREKAEERLEAAREAGDAAEAARMEARTQR 128
Query: 70 MALNVIQACR--ARGVDCIV--APFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+ + R R +D V AP E +AQ +Y+ G ADYV +ED D L+FGA +
Sbjct: 129 LTQTIQDTSRDLLRLLDVPVVEAPAEGEAQASYMAHKGDADYVGSEDYDTLLFGAPYTLR 188
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+L GN MD + + + + D + +L G D+ GI G+G K A
Sbjct: 189 QLTSKGNPELMDLDATLAKHDISWEQLID-----IAMLCGTDFNEGITGVGPKTA 238
>gi|303270955|ref|XP_003054839.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462813|gb|EEH60091.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 237
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
M V Q G+ I+AP EA+AQ A+L+ G+ D VIT+DSD +FGAK I +
Sbjct: 1 MHAEVQQLLTLFGIPYIIAPQEAEAQCAWLDREGFVDAVITDDSDAFLFGAKTIYRNVFE 60
Query: 130 SGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSI 187
S F D ++ + L + AK + +L G DY G+ G+G+ A + V +
Sbjct: 61 SKKYVEFYDANRVDADLGLDRAKMAQ-----LALLLGSDYTEGVTGVGIVNALEVVLNF 114
>gi|68486229|ref|XP_709963.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
gi|68486286|ref|XP_713000.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434429|gb|EAK93839.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434462|gb|EAK93871.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
Length = 990
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + + G+ I AP EA+AQ A L G D ++T+DSD
Sbjct: 716 QKAKRDSDEVTETMINDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGIVTDDSDCF 775
Query: 117 VFGAKKIIYK--LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+FG K IYK D F ++ L + KM L T K + +L G DY GIKG
Sbjct: 776 LFGGDK-IYKNMFDQKQYVEFYLQDDLFN--KMAL---TQHKLIELALLLGSDYTEGIKG 829
Query: 175 MG 176
+G
Sbjct: 830 IG 831
>gi|166085101|dbj|BAF99815.1| flap endonuclease-1 [Aeropyrum pernix]
gi|166085103|dbj|BAF99816.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 401
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K E+R K++ +A+ + EA+ + + +
Sbjct: 122 LVEEGIKPVYVFDGKPPEMKSREVEERLKRKAEAEARYRRAVEAGEVEEARKYAMMAARL 181
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + A G+ + AP E +AQ AY+ G A ++D D L+FG+ +++
Sbjct: 182 TSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 241
Query: 127 LDLSGNCCFMDREKLPS------------ALKMPLAKF--TDAKFRYMCILSGCDYW-TG 171
L ++G R KLP L+ L+K T + + IL G DY G
Sbjct: 242 LAITG------RRKLPGRDQYVEIKPEIIELETLLSKLGITREQLIAVGILLGTDYNPGG 295
Query: 172 IKGMGLKKAKDYVFSIMDP 190
++G G K A V S+ DP
Sbjct: 296 VRGYGPKTALRLVKSLGDP 314
>gi|78706854|ref|NP_001027232.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
gi|10728671|gb|AAG22424.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
Length = 1257
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 871 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 930
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N M+ E++ K + C++ G DY TGI G+G
Sbjct: 931 -RTVYKNFFAQNKHVMEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 982
>gi|328874795|gb|EGG23160.1| XPG [Dictyostelium fasciculatum]
Length = 308
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+++ IK + VFDG K R K+ K E + +++
Sbjct: 90 FMSNGIKPVFVFDGAPPTLKSGELAKRSAKKKEAKENLDEAKETGTTEDVAKFSKRTTSA 149
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K I+ G+ + AP EA+AQ A L G A +ED D L FG K ++
Sbjct: 150 TRKQNEECIKLLTLMGIPVVRAPCEAEAQCAELVKGGKAWASGSEDMDSLAFGTKILLRN 209
Query: 127 L---DLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L D N + D EKL + FT +F +CIL GCDY I+G+G +A
Sbjct: 210 LTASDQKKNPLWEFDHEKL-----LYGTGFTHDQFIDLCILLGCDYCESIRGIGPVRA 262
>gi|195577623|ref|XP_002078668.1| GD23543 [Drosophila simulans]
gi|194190677|gb|EDX04253.1| GD23543 [Drosophila simulans]
Length = 1235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 849 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 908
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N M+ E++ K + C++ G DY TGI G+G
Sbjct: 909 -RTVYKNFFAQNKHVMEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 960
>gi|70953099|ref|XP_745672.1| DNA repair endonuclease [Plasmodium chabaudi chabaudi]
gi|56526070|emb|CAH76802.1| DNA repair endonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 1281
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ I +P EA+AQ +YLN Y D +I++DSD++VF K II F +++K
Sbjct: 969 GIPYIQSPCEAEAQCSYLNNNNYCDAIISDDSDVIVFSGKTIIKN--------FFNKKKT 1020
Query: 142 -----PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV--------FSIM 188
+ ++ L + D + +L GCDY G+ G+G+ A + V I+
Sbjct: 1021 VEVYEKNLIERKLGLYQDDLIN-ISMLCGCDYTVGVHGIGIVNALEVVKAFPTFDDLKIL 1079
Query: 189 DPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLY 228
N LR + +Y K FL + N L +++
Sbjct: 1080 KEIVSNPLRHLYQENDENNYSDEIKHFLNTHKNYKLNWIF 1119
>gi|410670767|ref|YP_006923138.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
gi|409169895|gb|AFV23770.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
Length = 338
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 33/238 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ I+ + VFDG+ K T E R + R++ + K + EA + + S V
Sbjct: 68 LMEAGIRPVFVFDGKPPQMKSPTIEKRVQARENAQMKWEQAQEEGLAEEAYKYAQASSRV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + A G+ + AP E +AQ AY+ I ADY ++D D L+FGA +++
Sbjct: 128 DATIVEDSRKLLNAMGIPFLDAPSEGEAQAAYMVIKRDADYAGSQDYDSLLFGAPRVVRN 187
Query: 127 LDLSGNCCF-------------MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
L +SG M+ E+ L + + D +C+ G DY GI
Sbjct: 188 LTVSGKRKLPKKNLYVDVKPEVMELEETLLGLDVTREQLIDIA---LCV--GTDYNQGIT 242
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPV 231
+G KK AL+ + +G I + T + N F+ PV
Sbjct: 243 NIGPKK---------------ALKLVKEHGSIEKILASTGNEIPDLGNIKDFFMNPPV 285
>gi|238881502|gb|EEQ45140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 990
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + + G+ I AP EA+AQ A L G D ++T+DSD
Sbjct: 716 QKAKRDSDEVTEAMINDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGIVTDDSDCF 775
Query: 117 VFGAKKIIYK--LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+FG K IYK D F ++ L + KM L T K + +L G DY GIKG
Sbjct: 776 LFGGDK-IYKNMFDQKQYVEFYLQDDLFN--KMAL---TQHKLIELALLLGSDYTEGIKG 829
Query: 175 MG 176
+G
Sbjct: 830 IG 831
>gi|409079272|gb|EKM79634.1| hypothetical protein AGABI1DRAFT_114134 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K+ R ++R+ K + E E R++V V
Sbjct: 75 IVENGIKPAYVFDGKPPELKKGVLSKRFERREEAKEEGEEAKETGTVEEVDKLSRRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + I+ + G+ +VAP EA+AQ A L G +ED D L F A I+Y+
Sbjct: 135 TKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFNA-PILYR 193
Query: 127 LDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ F + +K P L+M +++F D +CIL GCDY I+G+G
Sbjct: 194 -----HLTFSEAKKQPISEINLEAALKGLEMNMSQFID-----LCILLGCDYLEPIRGVG 243
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKE 214
K +AL+ I YG +G + +E
Sbjct: 244 PK---------------SALKLIREYGSLGKIIAHLRE 266
>gi|195339243|ref|XP_002036229.1| GM16947 [Drosophila sechellia]
gi|194130109|gb|EDW52152.1| GM16947 [Drosophila sechellia]
Length = 1108
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 722 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 781
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ +YK + N M+ E++ K + C++ G DY TGI G+G
Sbjct: 782 -RTVYKNFFAQNKHVMEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIGAV 835
Query: 179 KAKDYVFSIMDPD 191
A + + S D
Sbjct: 836 TALEILASFSGQD 848
>gi|11994123|dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]
Length = 1522
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 46 ELLILDR-----GSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN 100
E+ +LD+ G E + R + V+ +M + + G+ I+AP EA+AQ A++
Sbjct: 936 EIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFME 995
Query: 101 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 157
+ D ++T+DSD+ +FGA+ +YK F DR+ + + + K + K
Sbjct: 996 QSNLVDGIVTDDSDVFLFGARS-VYK------NIFDDRKYVETYFMKDIEKELGLSRDKI 1048
Query: 158 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
M +L G DY GI G+G+ A + V + + D
Sbjct: 1049 IRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEED 1082
>gi|225452522|ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
Length = 1513
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 46 ELLILDR-----GSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLN 100
E++ILD+ G E + R + V+ +M + + G+ I+AP EA+AQ AY+
Sbjct: 809 EMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME 868
Query: 101 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 157
+A D V+T+DSD+ +FGA+ + + F +R+ + + + K
Sbjct: 869 LANLVDGVVTDDSDVFLFGARSVYKNI-------FDERKYVETYFMKDIETELGLNREKV 921
Query: 158 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKI------NVYGKI 205
M +L G DY G+ G+G+ A + + S + D + R+ N+ GK+
Sbjct: 922 IRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKV 975
>gi|5758314|gb|AAD50779.1|AF162792_1 XPG [Drosophila melanogaster]
Length = 1236
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 850 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 909
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N M+ E++ K + C++ G DY TGI G+G
Sbjct: 910 -RTVYKNFFAQNKHVMEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 961
>gi|5712619|gb|AAD47568.1|AF125578_1 DNA repair endonuclease [Drosophila melanogaster]
Length = 1236
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 850 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 909
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N M+ E++ K + C++ G DY TGI G+G
Sbjct: 910 -RTVYKNFFAQNKHVMEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 961
>gi|78706850|ref|NP_001027230.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
gi|78706852|ref|NP_001027231.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|5051952|gb|AAD38375.1|AF144092_1 nucleotide excision repair protein MUS201 [Drosophila melanogaster]
gi|7297419|gb|AAF52678.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|28380312|gb|AAO41169.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
Length = 1236
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 850 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 909
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N M+ E++ K + C++ G DY TGI G+G
Sbjct: 910 -RTVYKNFFAQNKHVMEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 961
>gi|219125938|ref|XP_002183226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|317374908|sp|B7G7Y7.1|FEN1_PHATC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|217405501|gb|EEC45444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 421
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 8 LAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQSVD 65
+ I+ + VFDG+ K RR+KR+ KA+AA + + G+ E ++ V
Sbjct: 80 MTEGIRPVFVFDGKPPDVKSHELIKRREKRE--KAQAALAVASEEGNVEEQDKQSKRLVR 137
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
K + + GV + AP EA+AQ A L AG TED D L F ++
Sbjct: 138 AGTKENEDCRKLLTLMGVPVVTAPCEAEAQAAALCKAGLVYATGTEDMDALTFATPILVR 197
Query: 126 KLDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KL + M+ K+ L + +F D +CI+ GCDY I+G+G K A
Sbjct: 198 KLTFANASKSMVQTMNYNKVIEGLAISHDQFVD-----LCIMLGCDYCDTIRGVGPKTA 251
>gi|18312112|ref|NP_558779.1| flap endonuclease-1 [Pyrobaculum aerophilum str. IM2]
gi|28380018|sp|Q8ZYN2.1|FEN_PYRAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|18159543|gb|AAL62961.1| DNA endonuclease rad2 homolog [Pyrobaculum aerophilum str. IM2]
Length = 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 39/294 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL I+ + VFDG+ K A E+RRK R+ + + R + + +++V +
Sbjct: 72 LLEAGIRPVYVFDGKPPEFKLAEIEERRKTREKAMEEVLRAIKEGRREDVAKYAKRAVFI 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T +M + GV + AP E +AQ AY+ G+ V ++D D L+FG+ K++
Sbjct: 132 TSEMVDEAKRLLSYMGVPWVQAPSEGEAQAAYMARKGHCWAVGSQDYDSLLFGSPKLVRN 191
Query: 127 LDLSGNCCFMDR--EKLPSALKMPLAKFTDAKFRY-----------MCILSGCDYW-TGI 172
L +S + E P +++ DA R + IL G DY G+
Sbjct: 192 LAVSPKRKIGEEVIELTPEIIEL------DAVLRALRLKNREQLIDLAILLGTDYNPDGV 245
Query: 173 KGMGLKKAKDYV--FSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
G+G +KA + F ++ E L+ G+Y I + F FL P
Sbjct: 246 PGVGPQKALKLIWEFGSLEKLLETVLK--------GAYFPIDPLEIKKF------FLNPP 291
Query: 231 VYDPVSKEVVPLNPLESEMRDEVFSQLSLKELELPKD-QAFQLALGNLDPFSLE 283
V D + EV +P E+ ++D + + E + K + + A G L SL+
Sbjct: 292 VTDQYATEV--RDPDEAALKDFLIREHDFSEERVSKALERLRKARGKLKTSSLD 343
>gi|340367941|ref|XP_003382511.1| PREDICTED: flap endonuclease 1-like [Amphimedon queenslandica]
Length = 373
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS---EAQSHLRQS 63
++ + IK + VFDG+ P ++ E +R R + K ELL + E + ++
Sbjct: 74 MVDNGIKPVYVFDGKP-PTMKSGELAKRADRRAEAQK--ELLKAEEQGDIQEVEKFQKRL 130
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V VT + + G+ + AP EA+AQ A L AG TED D L FG+ +
Sbjct: 131 VKVTPEHVSEAKKLLSLMGIPYVEAPCEAEAQCAALTKAGKVYATATEDMDALTFGSSIL 190
Query: 124 IYKLDLSGNCCFMDRE----KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ L S RE K + L M ++F D +CIL GCDY IKG+G
Sbjct: 191 VRNLTASEARKLPVREINLSKALTELDMDQSQFID-----LCILLGCDYCDSIKGIG 242
>gi|429962587|gb|ELA42131.1| hypothetical protein VICG_00772 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS-EAQSHLRQSVDVTHKMALN 73
+ VFDG+ P K A E +R +R K E L+ E H ++ V V +
Sbjct: 81 VYVFDGKAPPIK-AIELQKRNERRLKAEKMLEQAKLEEDKKEMDKHEKRKVKVEESHVDD 139
Query: 74 VIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNC 133
+ R GV + A E++A + L G V TED D L FGA ++ ++ S +
Sbjct: 140 CKRLFRLMGVPFVTAESESEAYCSLLCKRGVVKAVATEDMDALCFGAPILLRNMNASQSK 199
Query: 134 CF-MDREKLPSALK---MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 184
+D L + LK + + F D +CIL GCDY IKG+G K+A D +
Sbjct: 200 NLDIDEYNLGTILKELELTMGSFID-----LCILMGCDYCDTIKGVGHKRAYDLI 249
>gi|226478114|emb|CAX72750.1| Flap endonuclease 1 [Schistosoma japonicum]
Length = 389
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA-QSHLRQSVD 65
++ IK + VF+G+ P+ +A E +R R K + EA + ++ V
Sbjct: 74 MIESGIKPVYVFEGKP-PSMKAGELAKRADRRIESTKELAKAEAEEDLEAIEKFSKRLVK 132
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT + Q R GV + AP EA+AQ A L +G V TED D L FG ++
Sbjct: 133 VTPAHNEDCKQLLRLMGVPFVNAPGEAEAQCAALAKSGKVYAVGTEDMDALAFGTPVLLR 192
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDA-----------KFRYMCILSGCDYWTGIKG 174
L S A KM + +F A +F +CIL GCDY I+G
Sbjct: 193 HLTFS------------EARKMAIQEFNLASVLEGLSLTMDQFVDLCILLGCDYVDTIRG 240
Query: 175 MGLKKAKDYV 184
+G KKA D +
Sbjct: 241 IGPKKALDLL 250
>gi|326429821|gb|EGD75391.1| flap endonuclease-1 [Salpingoeca sp. ATCC 50818]
Length = 380
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 31/189 (16%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
++ + +K + VFDG+ L + E + R+K K +AA + G +A + R+
Sbjct: 74 MVNNGVKPVYVFDGKPPTLKSGELAKRTERRKEAQSKLEAA----TEEGVQADMEKFTRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + G+ IVAP EA+AQ A L AG TED D L FG
Sbjct: 130 LVKVTPEHNRQCQELLDLMGIPYIVAPCEAEAQCAELVKAGKVFATATEDMDALTFGTSV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ + S A KMP+ +F + +F +CIL GCDY
Sbjct: 190 LLRHMTFS------------EARKMPIQQFELKKVLEGLDLSQDEFIDLCILLGCDYCDK 237
Query: 172 IKGMGLKKA 180
I G+G +A
Sbjct: 238 IGGIGRVRA 246
>gi|393232393|gb|EJD39975.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 400
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K R ++R+ K + E + + + R++V V
Sbjct: 75 IVENGIKPAYVFDGKPPELKSGVLSKRFERREEAKEEGEEAKEVGTAEDVERFTRRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R G+ ++AP EA+AQ A L G +ED D L FGA +
Sbjct: 135 TREHNEECRRLLRLMGIPVVIAPSEAEAQCAELARGGKVYAAGSEDMDTLTFGAPILYRH 194
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
L S +D +K L M + +F + +C+L GCDY IKG+G K A
Sbjct: 195 LTFSEAKKQPISEIDLQKALDGLNMTMDQFIE-----LCLLLGCDYLEPIKGVGPKSALK 249
Query: 183 YV 184
Y+
Sbjct: 250 YM 251
>gi|426196176|gb|EKV46105.1| hypothetical protein AGABI2DRAFT_193982 [Agaricus bisporus var.
bisporus H97]
Length = 429
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 36/164 (21%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R++V VT + I+ + G+ +VAP EA+AQ A L G +ED D L F A
Sbjct: 129 RRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFNA 188
Query: 121 KKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWT 170
I+Y+ + F + +K P L+M +++F D +CIL GCDY
Sbjct: 189 -PILYR-----HLTFSEAKKQPISEINLEVALKGLEMNMSQFID-----LCILLGCDYLE 237
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKE 214
I+G+G K +AL+ I YG +G + +E
Sbjct: 238 PIRGVGPK---------------SALKLIREYGSLGKIIAHLRE 266
>gi|115456427|ref|NP_001051814.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|62510683|sp|Q75LI2.1|FEN12_ORYSJ RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B; AltName:
Full=OsFEN-1b
gi|317374867|sp|B8AMS4.1|FEN12_ORYSI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|40714676|gb|AAR88582.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|108711942|gb|ABF99737.1| Flap endonuclease-1b, putative, expressed [Oryza sativa Japonica
Group]
gi|113550285|dbj|BAF13728.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|215692762|dbj|BAG88230.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194043|gb|EEC76470.1| hypothetical protein OsI_14202 [Oryza sativa Indica Group]
gi|222626117|gb|EEE60249.1| hypothetical protein OsJ_13256 [Oryza sativa Japonica Group]
Length = 412
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L IK + VFDG K+ R KRD + + + +++V V
Sbjct: 75 ILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEVGDEDLIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K + + GV + AP EA+AQ A L + +ED D L FGA++ +
Sbjct: 135 TKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIASEDMDSLTFGARRFLRH 194
Query: 127 L-DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L DLS + K+ L + + +F D +CILSGCDY I+G+G ++A
Sbjct: 195 LTDLSFKRSPVTEFEVSKVLEELGLTMDQFID-----LCILSGCDYCENIRGIGGQRA 247
>gi|401408171|ref|XP_003883534.1| T10O22.7, related [Neospora caninum Liverpool]
gi|325117951|emb|CBZ53502.1| T10O22.7, related [Neospora caninum Liverpool]
Length = 959
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 60/218 (27%)
Query: 4 IHMLLA---HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
IHM++ H+++ ++VFDG +PAK A +E R++ R +A +L L + EA+
Sbjct: 60 IHMIMLFKYHRVEPLLVFDGAKIPAKAAEDEKRQQARLKASEEARQL--LKQHEEARRAN 117
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ T ++ Q ++I+ ++EDSDLL G
Sbjct: 118 RKPPGDTRELLTKCAQG---------------------ISISPEMAAAVSEDSDLLAHGC 156
Query: 121 KKIIYKLDLSGNCCFMDREKLP--------------SALKMPLAKFTDAK---------- 156
++++K+D GNC +R LP L+K +AK
Sbjct: 157 GQVLFKMDKEGNC---ERLVLPLKDSTSLAFTSSTSGPQSSSLSKDANAKKLGQLECLRD 213
Query: 157 -----FRYMCILSGCDYW--TGIKGMGLKKAKDYVFSI 187
F MC+L GCDY I G+G+ A +V +
Sbjct: 214 FDQKMFTAMCVLGGCDYTHDVHINGLGISTACRFVHKL 251
>gi|166085109|dbj|BAF99819.1| flap endonuclease-1 [Aeropyrum pernix]
gi|166085111|dbj|BAF99820.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K E+R +++ +A+ + EA+ + + +
Sbjct: 38 LVEEGIKPVYVFDGKPPEMKSREVEERLRRKAEAEARYRRAVEAGEVEEARKYAMMAARL 97
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + A G+ + AP E +AQ AY+ G A ++D D L+FG+ +++
Sbjct: 98 TSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
Query: 127 LDLSGNCCFMDREKL----PSALKM-PLAK---FTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G R++ P +++ PL T + + IL G DY G++G G
Sbjct: 158 LAITGRRKLPGRDQYVEIKPEIIELEPLLSKLGITREQLIAVGILLGTDYNPGGVRGYGP 217
Query: 178 KKAKDYVFSIMDP 190
K A V S+ DP
Sbjct: 218 KTALRLVKSLGDP 230
>gi|77640971|ref|NP_146975.2| flap endonuclease-1 [Aeropyrum pernix K1]
gi|150421551|sp|Q9YFY5.3|FEN_AERPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|116062210|dbj|BAA79026.2| flap structure-specific endonuclease [Aeropyrum pernix K1]
Length = 350
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K E+R +++ +A+ + EA+ + + +
Sbjct: 71 LVEEGIKPVYVFDGKPPEMKSREVEERLRRKAEAEARYRRAVEAGEVEEARKYAMMAARL 130
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + A G+ + AP E +AQ AY+ G A ++D D L+FG+ +++
Sbjct: 131 TSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 190
Query: 127 LDLSGNCCFMDREKL----PSALKM-PLAK---FTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G R++ P +++ PL T + + IL G DY G++G G
Sbjct: 191 LAITGRRKLPGRDQYVEIKPEIIELEPLLSKLGITREQLIAVGILLGTDYNPGGVRGYGP 250
Query: 178 KKAKDYVFSIMDP 190
K A V S+ DP
Sbjct: 251 KTALRLVKSLGDP 263
>gi|29467052|dbj|BAC66965.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|37496995|dbj|BAC98428.1| flap endonuclease-1b [Oryza sativa Japonica Group]
Length = 412
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L IK + VFDG K+ R KRD + + + +++V V
Sbjct: 75 ILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEVGDEDLIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K + + GV + AP EA+AQ A L + +ED D L FGA++ +
Sbjct: 135 TKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIASEDMDSLTFGARRFLRH 194
Query: 127 L-DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L DLS + K+ L + + +F D +CILSGCDY I+G+G ++A
Sbjct: 195 LTDLSFKRSPVTEFEVSKVLEELGLTMDQFID-----LCILSGCDYCENIRGIGGQRA 247
>gi|238879957|gb|EEQ43595.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 684
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I L+ I VI+VFDG P K ++E+ ++ + L ++ SE +
Sbjct: 67 MAKILALVGLNISVIVVFDGILKPLKLKSKENEGL---IYEDELQRLALISNYSENNPFV 123
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q K+ L+ ++ + AP E +AQ AYL G DYVI++D D LVFGA
Sbjct: 124 EQ-----LKIELS------NNKIEYVQAPGEGEAQCAYLQKLGIVDYVISQDVDALVFGA 172
Query: 121 KKIIYKL---------------DLSGNCCF----MDREKLPSALKMPLAKFTDAKFRYMC 161
++++ D++ + +D K+ + T ++ ++
Sbjct: 173 RRVLRNFSRFAEDIGKSPPKSSDITARSSYYVTPVDMNKVEQETGL-----TTSRLVFLA 227
Query: 162 ILSGCDYWTGIKGMGLKKAKDYVFS 186
L G DY G K MG+ AK+ S
Sbjct: 228 SLRGGDYSVGAKKMGIVNAKNLALS 252
>gi|209879882|ref|XP_002141381.1| Flap endonuclease 1 [Cryptosporidium muris RN66]
gi|317374886|sp|B6AFP1.1|FEN1_CRYMR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|209556987|gb|EEA07032.1| Flap endonuclease 1, putative [Cryptosporidium muris RN66]
Length = 472
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 36/201 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
LL IK + VFDG P + EE ++K KA+ L++ E + L
Sbjct: 76 LLEAGIKPVFVFDGE--PPELKMEELMKRKERREKAQQE----LEKAQEEGDTETIRKQL 129
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++ +T + + +V + G+ I A EA+AQ A L G V TED+D L FG
Sbjct: 130 IRTIKITKEQSDDVKYMLKLLGIPVIEATSEAEAQCAELCKEGLVYGVATEDADSLTFGT 189
Query: 121 KKIIYKLDLS--------GNC----CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDY 168
+I L+ S GN + + S L + + +F D +CIL GCDY
Sbjct: 190 PLVIRHLNFSDGKFSDSKGNSKNSLQVIKLSTVLSDLGLSMQQFVD-----LCILCGCDY 244
Query: 169 WTGIKGMG-------LKKAKD 182
I+G+G LKK KD
Sbjct: 245 CGTIRGIGALTAYKLLKKHKD 265
>gi|299749580|ref|XP_001836208.2| flap structure-specific endonuclease [Coprinopsis cinerea
okayama7#130]
gi|298408502|gb|EAU85580.2| flap structure-specific endonuclease [Coprinopsis cinerea
okayama7#130]
Length = 1200
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 55 EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
+ ++ +R + DV +M ++ R G+ I AP EA+AQ A L G D VIT+DSD
Sbjct: 781 QKRNAMRDAEDVNQQMISQIMTMLRLFGIPYITAPMEAEAQCAELTSLGLVDGVITDDSD 840
Query: 115 LLVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+ +FGA ++ + CF L S L+ L D + +L G DY G+
Sbjct: 841 VFLFGASRVFKNMFNQSKTVECF-----LLSDLERELGLDRDTLIQLAYLL-GSDYTEGL 894
Query: 173 KGMG 176
G+G
Sbjct: 895 AGVG 898
>gi|156839544|ref|XP_001643462.1| hypothetical protein Kpol_483p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114073|gb|EDO15604.1| hypothetical protein Kpol_483p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 397
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 98/245 (40%), Gaps = 62/245 (25%)
Query: 1 MKYIHML---LAHKIKVIMVFDGRHLPA-----------------------KEATEEDRR 34
+ IH L L+ + I+VFDG P+ K+ +D
Sbjct: 72 LNLIHRLKEFLSFNVGFILVFDGSMKPSFKKDSGRYDSTLLENDLYFNEMFKDIDYKDIW 131
Query: 35 KKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADA 94
K +S + + + + G + L + ++ I AC EA+A
Sbjct: 132 DKHNSFHSNVGKCIGQESGLQNSDFLDNLKSILKDFKISYIDACG-----------EAEA 180
Query: 95 QMAYLNIAGYADYVITEDSDLLVFGAKKII-----YKLDL--SGN------------CCF 135
Q ++L + GY D+V+T DSD L FG K++ Y DL SGN
Sbjct: 181 QCSWLQVNGYVDFVLTNDSDSLFFGCTKLLRNYSKYTQDLGSSGNSPIKKPDSRESFVTI 240
Query: 136 MDREKLPSALKMPLAKFTDA-KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFEN 194
+D EK+ +K+ TD F +L G DY G+KG+G KA + + +PDF
Sbjct: 241 VDMEKIRLLMKVR----TDPDSFLLFSVLLGGDYNQGVKGLGKAKAAK-LSQLEEPDFAT 295
Query: 195 ALRKI 199
R I
Sbjct: 296 LFRNI 300
>gi|166085113|dbj|BAF99821.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VFDG+ K E+R +++ +A+ + EA+ + + +
Sbjct: 38 LVEEGIKPVYVFDGKPPEMKSREVEERLRRKAEAEARYRRAVEAGEVEEARKYAMMAARL 97
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + A G+ + AP E +AQ AY+ G A ++D D L+FG+ +++
Sbjct: 98 TSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
Query: 127 LDLSGNCCFMDREKL----PSALKM-PLAK---FTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G R++ P +++ PL T + + IL G DY G++G G
Sbjct: 158 LAITGRRKLPGRDQYVEIKPEIIELEPLLSKLGITREQLIAVGILLGTDYNPGGVRGYGP 217
Query: 178 KKAKDYVFSIMDP 190
K A V S+ DP
Sbjct: 218 KTALRLVKSLGDP 230
>gi|398396234|ref|XP_003851575.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
gi|339471455|gb|EGP86551.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
Length = 393
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG K R +++ + E + + R++V V
Sbjct: 74 IVDNGIKPVYVFDGAPPKLKSGELAKRFQRKSEAQESHEEAKETGTAEDVEKFSRRTVRV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + G+ I+AP EA+AQ A L G +ED D L F + ++ K
Sbjct: 134 TREHNAEAQRLLKLMGIPYIIAPTEAEAQCAVLARGGKVFAAASEDMDTLTFASPVLVRK 193
Query: 127 LDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L F ++ K P L+M +F D CIL GCDY +KG+G
Sbjct: 194 L------TFAEQRKEPVQEIHLDRVLEGLEMDQTQFID-----FCILLGCDYLDPVKGIG 242
Query: 177 LKKA 180
K A
Sbjct: 243 PKSA 246
>gi|392564416|gb|EIW57594.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 1244
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 49 ILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYV 108
I D + ++ +R S D+T +M ++ R G+ I AP EA+AQ A L G D +
Sbjct: 817 IRDLNRQKKTAMRDSEDITQQMISQIMIMLRLFGIPYITAPMEAEAQCAALLSFGLVDGI 876
Query: 109 ITEDSDLLVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGC 166
IT+DSD+ +FG +++ + CF L S L+ L D R +L G
Sbjct: 877 ITDDSDVFLFGGGRVLKNMFNQSKTVECF-----LLSDLERELGLDRDKLVRLAYLL-GS 930
Query: 167 DYWTGIKGMG 176
DY G+ G+G
Sbjct: 931 DYTDGLPGVG 940
>gi|68488322|ref|XP_711995.1| hypothetical protein CaO19.652 [Candida albicans SC5314]
gi|46433350|gb|EAK92794.1| hypothetical protein CaO19.652 [Candida albicans SC5314]
Length = 684
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I L+ I VI+VFDG P K ++E+ ++ + L ++ SE +
Sbjct: 67 MAKILALVGLNISVIVVFDGILKPLKLKSKENEGL---IYEDELQRLALISNYSEYNPFV 123
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
V K+ L+ ++ + AP E +AQ AYL G DYVI++D D LVFGA
Sbjct: 124 -----VQLKIELS------NNKIEYVQAPGEGEAQCAYLQKLGIVDYVISQDVDALVFGA 172
Query: 121 KKIIYKL---------------DLSGNCCF------MDREKLPSALKMPLAKFTDAKFRY 159
++++ D++ + MD+ + + L T ++ +
Sbjct: 173 RRVLRNFSRFAEDIGKSPPKSSDITARSSYYVTPVDMDKVEQETGL-------TTSRLVF 225
Query: 160 MCILSGCDYWTGIKGMGLKKAKDYVFS 186
+ L G DY G K MG+ AK+ S
Sbjct: 226 LASLRGGDYSVGAKKMGIVNAKNLALS 252
>gi|330509049|ref|YP_004385477.1| FLAP endonuclease [Methanosaeta concilii GP6]
gi|328929857|gb|AEB69659.1| FLAP endonuclease [Methanosaeta concilii GP6]
Length = 339
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ +KV VFDG K T +R + RD KA A G + + + + +
Sbjct: 71 LIEAGVKVAFVFDGEAPTFKAVTLAERSEIRD--KAAWAWEEARAAGEDGFKYAQAASRI 128
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ + + A G+ I AP E +AQ AY+ G DY ++D D L+FGA ++
Sbjct: 129 NSEIIEDGRRLILAMGLPVIQAPSEGEAQAAYMAARGDVDYAGSQDYDSLLFGAPLVVRN 188
Query: 127 LDLSG------NCCFMDREKLPSALKMPLAKF--TDAKFRYMCILSGCDYWTGIKGMGLK 178
L ++G ++D E L++ LA T + + I+ G D+ +G++ +G K
Sbjct: 189 LAITGKRKLPRKNIYVDVEPEVINLEVGLANLGITHKQLVEIGIMCGTDFNSGLERVGPK 248
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD----- 233
AL+ I G + S + + + F FL+ PV D
Sbjct: 249 ---------------TALKLIREKGDLESILADRDDKIEDFEKIREFFLHPPVTDDYKIA 293
Query: 234 ---PVSKEVV 240
PV +E+V
Sbjct: 294 LKKPVPEEIV 303
>gi|62203342|gb|AAH92837.1| Zgc:110269 [Danio rerio]
gi|182888906|gb|AAI64364.1| Zgc:110269 protein [Danio rerio]
Length = 333
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 26/176 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L H IK + V DG+ K A E R + ++ + + ++ + +
Sbjct: 48 FLEHDIKPVFVLDGKPPNQKRAVLEKRAQSTGWSSSQGP--------NTGSAFNQECLRL 99
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
H M GV CI AP EA+A A+L G + V +ED D L FG ++ +
Sbjct: 100 LHLM-----------GVPCIKAPGEAEALCAHLAKIGTVNAVASEDMDTLAFGGTVLLRQ 148
Query: 127 LDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L+ + + KL AL++ +F D +CIL GCDY I G+G +A
Sbjct: 149 LNAKRDSEITEYSLPKLLEALQLKYEEFVD-----LCILLGCDYCDKIGGLGPSRA 199
>gi|241954550|ref|XP_002419996.1| DNA-repair protein RAD2 orthologue, putative; single-stranded DNA
endonuclease, putative [Candida dubliniensis CD36]
gi|223643337|emb|CAX42212.1| DNA-repair protein RAD2 orthologue, putative [Candida dubliniensis
CD36]
Length = 992
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + + G+ I AP EA+AQ A L G D ++T+DSD
Sbjct: 718 QKAKRDSDEVTEAMINDVQELLKRFGIPYITAPMEAEAQCAELFKIGLVDGIVTDDSDCF 777
Query: 117 VFGAKKIIYK--LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+FG K IYK D F ++ L + KM L T K + +L G DY GIKG
Sbjct: 778 LFGGDK-IYKNMFDQKQYVEFYLQDDLFN--KMAL---TQHKLIELALLLGSDYTEGIKG 831
Query: 175 MG 176
+G
Sbjct: 832 IG 833
>gi|119719220|ref|YP_919715.1| flap endonuclease-1 [Thermofilum pendens Hrk 5]
gi|166973708|sp|A1RWY2.1|FEN_THEPD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119524340|gb|ABL77712.1| flap endonuclease 1 [Thermofilum pendens Hrk 5]
Length = 346
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLRQSVDVTHK 69
IK + VFDGR K+ E R + + + K E ++RG EA+ + +Q+ +T
Sbjct: 75 IKPVYVFDGRPPELKQKELERRYQIKVEAEKKYRE--AIERGDLEEARIYAQQTSRLTAA 132
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
M + R GV + AP E +AQ AY+ G A ++D D L+FG+ +++ L +
Sbjct: 133 MVHDAKLLLRYMGVPYVEAPSEGEAQAAYMVKKGDAWASGSQDFDSLLFGSPRLVRNLAI 192
Query: 130 SGNCCFMDR----EKLPSALKMP----LAKFTDAKFRYMCILSGCDYW-TGIKGMGLKKA 180
+G + E P +++ + T + + IL G DY G +G+G+KKA
Sbjct: 193 TGKRKLPRKDVYVEVKPEIVELEELLRVHGITHQQLVVIGILVGTDYAPEGARGIGVKKA 252
Query: 181 KDYVFSIMDPD 191
V + DP+
Sbjct: 253 LKLVKELKDPE 263
>gi|390961742|ref|YP_006425576.1| flap endonuclease-1 [Thermococcus sp. CL1]
gi|390520050|gb|AFL95782.1| flap endonuclease-1 [Thermococcus sp. CL1]
Length = 341
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLRQSV 64
L+ IK VFDG+ K E RR+ R+ + + E L+RG EA+ + ++
Sbjct: 68 LMEAGIKPAYVFDGKPPEFKRKEIEKRREAREKAEERWHE--ALERGDLEEAKKYAMRAT 125
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
V + + + G+ I AP E +AQ AY+ ++D D L+FGA +++
Sbjct: 126 RVNEGLINDAKKLLELMGIPVIQAPSEGEAQAAYMAAKKKVYASASQDYDSLLFGAPRLV 185
Query: 125 YKLDLSGNCCFMDREKLPSA-----LKMPLAKFTDA---------KFRYMCILSGCDYW- 169
L ++G R KLP +K L + K M IL G DY
Sbjct: 186 RNLTITG------RRKLPGKNAYVEVKPELVVLEEVLKELGVDREKLIEMAILVGTDYNP 239
Query: 170 TGIKGMGLKKAKDYVFSIMDP 190
GIKG+G KKA V DP
Sbjct: 240 GGIKGIGPKKALTIVKRTKDP 260
>gi|448508200|ref|XP_003865895.1| Yen1 protein [Candida orthopsilosis Co 90-125]
gi|380350233|emb|CCG20454.1| Yen1 protein [Candida orthopsilosis Co 90-125]
Length = 616
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I L+ I VI+VFDG P K T + + K ++ +E L
Sbjct: 67 MSKILALIGLNISVIVVFDGVSKPDK--TRTGKALDYEEELEKFQHMVYFSEPNEFVEQL 124
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ V N I+ +A G EA+AQ AY+ G D+VIT D D L+FGA
Sbjct: 125 KDSLKV------NKIEYLQAAG--------EAEAQCAYIQKLGIVDFVITNDVDSLIFGA 170
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKM-------------PLAKFTDAKFRYMCILSGCD 167
+++ K + LK + A+ ++ L G D
Sbjct: 171 TQVLRNYSRFVEDIGHSPSKKSATLKQRYYVTPVNMKRIEEITGLNRARLVFLASLRGGD 230
Query: 168 YWTGIKGMGLKKAKDYVFS 186
Y +G+K MG+ AK+ S
Sbjct: 231 YSSGVKRMGITNAKNLALS 249
>gi|448565137|ref|ZP_21636108.1| flap endonuclease-1 [Haloferax prahovense DSM 18310]
gi|445715796|gb|ELZ67549.1| flap endonuclease-1 [Haloferax prahovense DSM 18310]
Length = 326
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAK------AAELLILDRGSEAQSHLRQS 63
H + + VFDG K+ RR++R+ +A+ A + + R L ++
Sbjct: 73 HDLTPVFVFDGGVTEMKDDEVAKRREQREKAEARLEEAREAGDAVEAARMEARTQRLTET 132
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ T + L+++ V + AP E +AQ +Y+ G ADYV +ED D L+FGA
Sbjct: 133 IQDTSRELLSLLD------VPVVEAPAEGEAQASYMARKGDADYVGSEDYDPLLFGAPYT 186
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L G+ MD + + + D + +L G D+ GI G+G K A
Sbjct: 187 LRQLTSKGDPELMDLDATLDKHDITYEQLVD-----IAMLCGTDFNEGITGIGPKTA 238
>gi|357113521|ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824635 [Brachypodium
distachyon]
Length = 1460
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 12/114 (10%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ I+AP EA+AQ AY+ I D V+T+DSD+ +FGA+ + + F DR+ +
Sbjct: 880 GLPYIIAPMEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYV 932
Query: 142 PS----ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ ++ L D R M +L G DY GI G+G+ A + V + + D
Sbjct: 933 ETYFMKDIESELGLTRDQLIR-MALLLGSDYTEGISGIGIVNAIEVVHAFSEED 985
>gi|257077017|ref|ZP_05571378.1| flap endonuclease-1 [Ferroplasma acidarmanus fer1]
Length = 339
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 25/244 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD- 65
LL + IK + FDG+ K+ T ++R+ ++ + A+ L + ++ +E L ++
Sbjct: 68 LLENNIKPVYSFDGKPYRLKDETLKERKAIKEKNIAEL-NLAMENKDAEKIKTLSSRINY 126
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T + + GV + AP E +AQ +Y++ G D VI++D D L+ GA++++
Sbjct: 127 ITADIVSESKKLLDMMGVPWVQAPSEGEAQASYMSKVGAVDSVISQDYDCLLLGARRVLR 186
Query: 126 KLDL------SGNCCFMDREKLPSALKMPLAKF--TDAKFRYMCILSGCDYWTGIKGMGL 177
+ SG F++ LK L T + + IL G D+ GI+G+G
Sbjct: 187 NFTMYGRRRISGTGKFINITPEIIDLKENLDNLGITQDQLIGIGILVGTDFNPGIRGIGA 246
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
K L I YG I S +K + + + FL PV D
Sbjct: 247 K---------------TGLSLIKKYGDIESVLKQKNKTIDNLDEIKEFFLNPPVEDTGEL 291
Query: 238 EVVP 241
+ P
Sbjct: 292 KFAP 295
>gi|403414469|emb|CCM01169.1| predicted protein [Fibroporia radiculosa]
Length = 400
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K R +R+ K + E + R++V V
Sbjct: 67 MVENGIKPLYVFDGKPPEMKAGVLSKRLARREEAKEEGEEAKETGTTEDVDRFSRRTVKV 126
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ +VAP EA+AQ A L G +ED D L F A ++Y+
Sbjct: 127 TREHNEECRRLLGLMGIPFVVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFSAP-VLYR 185
Query: 127 LDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ F + K P L+M +++F D +CIL GCDY IKG+G
Sbjct: 186 -----HLTFSEARKQPISEIHLDKALEGLEMNMSQFID-----LCILLGCDYLEPIKGIG 235
Query: 177 LKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 218
K +AL+ + +G +G+ ++ +E L +
Sbjct: 236 PK---------------SALKLVREHGNLGAVIEHLQEKLAA 262
>gi|225543341|ref|NP_001017611.2| probable flap endonuclease 1 homolog [Danio rerio]
gi|317374871|sp|B0UXL7.1|FEN1B_DANRE RecName: Full=Probable flap endonuclease 1 homolog; Short=FEN-1
homolog; AltName: Full=Flap structure-specific
endonuclease 1 homolog
Length = 350
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L H IK + V DG+ K A E R + +++ + + ++ + +
Sbjct: 65 FLEHDIKPVFVLDGKPPHQKRAVLEKRAQSTGWSSSQSP--------NTGSAFNQECLRL 116
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
H M GV CI AP EA+A A+L G + V +ED D L FG ++ +
Sbjct: 117 LHLM-----------GVPCIKAPGEAEALCAHLAKIGTVNAVASEDMDTLAFGGTVLLRQ 165
Query: 127 LDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L+ + + KL AL++ +F D +CIL GCDY I G+G +A
Sbjct: 166 LNAKRDSEITEYSLPKLLEALQLKYEEFVD-----LCILLGCDYCDKIGGLGPSRA 216
>gi|302796239|ref|XP_002979882.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
gi|302813529|ref|XP_002988450.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300143852|gb|EFJ10540.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300152642|gb|EFJ19284.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
Length = 377
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 24/186 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +K + VFDG+ K+A R +R+ E + ++ + + +++V V
Sbjct: 72 LLESGMKPVYVFDGKPPELKKAELVKRGARREEATEGLTEAIEKGEVADIEKYSKRTVKV 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADY-VITEDSDLLVFGAKKIIY 125
T + + + R G+ I AP EA+A+ A L A Y V +ED D L FG+ + +
Sbjct: 132 TKQHNEDCQKLLRLMGIPVIEAPCEAEAECAALCKADKVVYAVASEDMDSLTFGSPRFLR 191
Query: 126 KLDLSGNCCFMDREKLPSALKMPLAKFTDA-----------KFRYMCILSGCDYWTGIKG 174
L M+ P++ K+P+ +F + +F +CIL GCDY I+G
Sbjct: 192 HL--------ME----PASRKIPVMEFQISTALQELNLSMDQFIDLCILCGCDYCDTIRG 239
Query: 175 MGLKKA 180
+G + A
Sbjct: 240 IGPQTA 245
>gi|383863581|ref|XP_003707258.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Megachile rotundata]
Length = 1072
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
RQ +D++ ++ + R G+ IVAP EA+AQ AYL D IT+DSD+ +FG
Sbjct: 692 RQGIDISDRIRTEAQELLRLFGIPYIVAPMEAEAQCAYLEQIHLTDGTITDDSDIWLFGG 751
Query: 121 KKIIYKLDLSGN-----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
+ +YK + N C D E K T + + +L G DY G+ G+
Sbjct: 752 -QCVYKNFFNNNKKVLQFCLGDIEH--------HFKLTRNEMIQLALLVGSDYTVGLTGI 802
Query: 176 G 176
G
Sbjct: 803 G 803
>gi|336477791|ref|YP_004616932.1| flap structure-specific endonuclease [Methanosalsum zhilinae DSM
4017]
gi|335931172|gb|AEH61713.1| flap structure-specific endonuclease [Methanosalsum zhilinae DSM
4017]
Length = 337
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ I+ + VFDG K T + RRK R++ ++ E EA + + SV
Sbjct: 68 LIEEGIRPVFVFDGTPPDFKSKTLDKRRKVRETAHSRWDEAREKGLEKEAYKYAQASV-- 125
Query: 67 THKMALNVIQACRA----RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
K+ VI++ + G+ + AP E +AQ A++ +G A+YV ++D D L+FGA
Sbjct: 126 --KLDSYVIESSKTLLSIMGIPVVQAPCEGEAQAAHMVKSGDANYVASQDYDSLLFGAPF 183
Query: 123 IIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGCDY 168
+I + ++G + KLP L+ L + T + + + G DY
Sbjct: 184 VIRNIAITG------KRKLPGKDAYVDVKPEVIDLEHSLGQMGITHPQLVDIALCVGTDY 237
Query: 169 WTGIKGMGLKKAKDYVFSIMDPDFENALRKIN 200
G++ +G K+A + V D E+ LRK+
Sbjct: 238 NNGLENIGQKRALELVKK--HGDIESVLRKLG 267
>gi|448622799|ref|ZP_21669448.1| flap endonuclease-1 [Haloferax denitrificans ATCC 35960]
gi|445753307|gb|EMA04724.1| flap endonuclease-1 [Haloferax denitrificans ATCC 35960]
Length = 326
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS---------EAQSH- 59
H + + VFDG K+ D KR + KA E L R + EA++
Sbjct: 73 HDLTPVFVFDGGVTEMKD----DEVAKRREQREKAEERLEAAREAGDSVEAARMEARTQR 128
Query: 60 LRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
L +++ T + L+++ V + AP E +AQ +Y+ G ADYV +ED D L+FG
Sbjct: 129 LTETIQDTSRKLLSLLD------VPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFG 182
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGL 177
A + +L GN MD L L K T + + +L G D+ GI G+G
Sbjct: 183 APYTLRQLTSKGNPELMD-------LDATLDKHDITHEQLVDIAMLCGTDFNEGITGIGP 235
Query: 178 KKA 180
K A
Sbjct: 236 KTA 238
>gi|300120156|emb|CBK19710.2| unnamed protein product [Blastocystis hominis]
Length = 370
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK + VF+G+ P + E +RRK+ + KA E L + +E Q + +
Sbjct: 78 LMEDGIKPVFVFEGKP-PEMKQNELERRKQ---LREKAEEELKDAKEAENQEEIEKLSKR 133
Query: 67 THKMALNVIQAC----RARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
T M I C R GV I A EA++Q A L + +ED D L FG
Sbjct: 134 TVHMEGGHINDCKELLRLMGVPVIDAASEAESQCAELAKKKKVWAMASEDMDSLTFGTPV 193
Query: 123 IIYKLDLSGNC-------CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
+I L S +D ++ A+K+ + +F D +CIL GCDY GI+G+
Sbjct: 194 LIRHLTKSQGAKKDAQSILEVDLAEVLEAMKLSMDEFID-----LCILCGCDYCDGIRGI 248
Query: 176 GLKKAKDYV--FSIMDPDFENALRKINV 201
G KA ++ + ++ EN K V
Sbjct: 249 GQVKAYQFIQKYRTIEKVIENLTDKYQV 276
>gi|50556476|ref|XP_505646.1| YALI0F20042p [Yarrowia lipolytica]
gi|74632421|sp|Q6C116.1|FEN1_YARLI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49651516|emb|CAG78455.1| YALI0F20042p [Yarrowia lipolytica CLIB122]
Length = 389
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGSEAQSHLRQSV 64
++ + IK + VFDG+ P ++ E +RK+R K E L ++ G E +
Sbjct: 75 MVDNGIKPVYVFDGKP-PVLKSGELAKRKERREEALKKIEELKQQVEDGEEGEETKEAQE 133
Query: 65 DVTH--KMALNVI--QACRAR------GVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
DVT K + V Q A+ G+ + AP EA+AQ A L AG +ED D
Sbjct: 134 DVTRFEKRTVRVTPEQNDEAKKLLTLMGIPIVEAPCEAEAQCAKLAEAGKVYAAASEDMD 193
Query: 115 LLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCIL 163
L FG+ ++ L S A KMP+++ T A+F +CIL
Sbjct: 194 TLCFGSPVLLRHLTFS------------EAKKMPISEINFAKILEGLEMTHAQFIDLCIL 241
Query: 164 SGCDYWTGIKGMGLKKA 180
GCDY I+G+G + A
Sbjct: 242 LGCDYADTIRGVGPQTA 258
>gi|116754923|ref|YP_844041.1| flap endonuclease-1 [Methanosaeta thermophila PT]
gi|121693591|sp|A0B9M7.1|FEN_METTP RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|116666374|gb|ABK15401.1| flap endonuclease 1 [Methanosaeta thermophila PT]
Length = 336
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 41/243 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLI--LDRGSEAQSHLRQSV 64
L+ I+V VFDG K T R + +++ + + E + +D AQ+ R +
Sbjct: 68 LIEVGIRVAFVFDGTPPELKAGTLAARAQMKEAAEIQLQEAIATGVDSFRYAQATARINS 127
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
++ H + I+ A G+ + AP E +AQ A++ I G DYV ++D D L+FGA +++
Sbjct: 128 EILH----DSIRLLDAMGIPYVQAPSEGEAQAAFMAIRGDVDYVASQDYDSLLFGAPRVV 183
Query: 125 YKLDLSGNCCFMDREKLPS------------ALKMPLAKFTDAKFRY--MCILSGCDYWT 170
L ++G R K+P L+ L + ++ + + I+ G DY
Sbjct: 184 RNLAITG------RRKMPRKNIYIDVPPEVIILEEELTRLGISREQLIDIGIMCGTDYNR 237
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQP 230
G+ +G K+ AL+ I +G + + + E + +F +FL+
Sbjct: 238 GLPKVGPKR---------------ALKLIREHGCLEAVLDALGESIENFREIRELFLHPA 282
Query: 231 VYD 233
V +
Sbjct: 283 VTE 285
>gi|330835718|ref|YP_004410446.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
gi|329567857|gb|AEB95962.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 9/183 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL + I VFDG+ K E+RRK ++ K + E + + + + +
Sbjct: 21 LLEQGVIPIYVFDGKPPEIKAQELENRRKLKEEAMKKLERAKEEGKIEEVRKYSQMTSRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T MA + G+ + AP E +A+ AY+N G ++D D L+FGA ++I
Sbjct: 81 TSSMANEGKRLLSLMGIPTVQAPSEGEAEAAYMNSQGLVYAAASQDYDSLLFGATRLIRN 140
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L +SG ++ E + + L + T + + IL G DY GIKG+G
Sbjct: 141 LTISGKRKLPNKDAYVEVKPEVIEADLLLKKLGITRDELIDIAILIGTDYNPDGIKGIGP 200
Query: 178 KKA 180
K+A
Sbjct: 201 KRA 203
>gi|320202935|ref|NP_001188509.1| flap endonuclease-1 [Bombyx mori]
gi|268044461|gb|ACY92094.1| flap endonuclease-1 [Bombyx mori]
Length = 380
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + + Q + GV + AP EA+AQ A L +G TED D L FGA
Sbjct: 128 RRLVKVTKQRSEEAKQLLKLMGVPVVDAPCEAEAQCAALVKSGKVFAAATEDMDALTFGA 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F +F +CIL GCDY
Sbjct: 188 PVLLRHLTFS------------EARKMPVQEFHLNNVLQGLELKQNEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
I+G+G K+A D +
Sbjct: 236 GSIRGVGPKRAIDLI 250
>gi|156084190|ref|XP_001609578.1| Rad2 endonuclease [Babesia bovis T2Bo]
gi|154796830|gb|EDO06010.1| Rad2 endonuclease, putative [Babesia bovis]
Length = 1002
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
GV IVAP EA+AQ A+LN G VI++DSD L FGAK+ ++K SGN E
Sbjct: 697 GVPFIVAPSEAEAQCAHLNNTGLCFGVISDDSDTLAFGAKR-VFKNFYSGNVF----EVY 751
Query: 142 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ + + + IL GCDY G++G+G+ A
Sbjct: 752 VADRILHELGLGRNEIALLAILCGCDYTPGVRGIGVVNA 790
>gi|320582300|gb|EFW96517.1| 5' to 3' exonuclease, 5' flap endonuclease [Ogataea parapolymorpha
DL-1]
Length = 374
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K E R K+R+ + KA EL E Q ++ V V
Sbjct: 75 MVGNGIKPCYVFDGKPPVLKGGELEKRLKRREEAEQKALELKETGTVEELQRFEKRQVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + R G+ ++AP EA+AQ A L G +ED D L + +
Sbjct: 135 TREQNEQAQHLLRLMGIPYVIAPCEAEAQCAELARKGKVYAAASEDMDTLCYQPPFFLRN 194
Query: 127 LDLSGNCCFMDREKLPSAL----KMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ + + E SA+ M + F D +CIL GCDY IKG+G
Sbjct: 195 VTAAESKKLKVDEFTTSAVLEGFGMDINTFVD-----LCILLGCDYCETIKGIG 243
>gi|15778123|dbj|BAB68507.1| FEN-1 nuclease [Gallus gallus]
Length = 381
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 33/194 (17%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKE-ATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLR 61
++ + IK + VFDG+ L + E A +RR + + H +A E G EA + +
Sbjct: 74 MVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHLQEAQEA-----GEEANIEKFSK 128
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ V VT + + G+ + AP EA+A A L AG TED D L FG+
Sbjct: 129 RLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDMDCLTFGSP 188
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWT 170
++ L S A K+P+ +F T +F +CIL GCDY
Sbjct: 189 VLMRHLTAS------------EAKKLPIQEFHLNRVLQDLGLTWEQFVDLCILLGCDYCE 236
Query: 171 GIKGMGLKKAKDYV 184
I+G+G K+A + +
Sbjct: 237 SIRGIGPKRAVELI 250
>gi|389595061|ref|XP_003722753.1| putative DNA repair protein RAD2 [Leishmania major strain Friedlin]
gi|323363981|emb|CBZ12987.1| putative DNA repair protein RAD2 [Leishmania major strain Friedlin]
Length = 931
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 67 THKMA-----LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
TH++ LNV++ GV +++P EADAQ A+L G D V TEDSD+LV GA
Sbjct: 631 THRVVIPFELLNVVELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGAT 690
Query: 122 KIIYK-LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+++ S N ++ L + T + L GCDY G+ G+GL A
Sbjct: 691 RVLRGFFAQSKNVVAYEQTHLSA------CGITKTVLVALASLLGCDYTEGVCGIGLVGA 744
>gi|118405170|ref|NP_001072959.1| flap endonuclease 1 [Gallus gallus]
gi|82082625|sp|Q5ZLN4.1|FEN1_CHICK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53129083|emb|CAG31359.1| hypothetical protein RCJMB04_5g12 [Gallus gallus]
Length = 381
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 33/194 (17%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKE-ATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLR 61
++ + IK + VFDG+ L + E A +RR + + H +A E G EA + +
Sbjct: 74 MVENGIKPVYVFDGKPPQLKSGELAKRTERRSEAEKHLQEAQEA-----GEEANIEKFSK 128
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ V VT + + G+ + AP EA+A A L AG TED D L FG+
Sbjct: 129 RLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDMDCLTFGSP 188
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWT 170
++ L S A K+P+ +F T +F +CIL GCDY
Sbjct: 189 VLMRHLTAS------------EAKKLPIQEFHLNRVLQDLGLTWEQFVDLCILLGCDYCE 236
Query: 171 GIKGMGLKKAKDYV 184
I+G+G K+A + +
Sbjct: 237 SIRGIGPKRAVELI 250
>gi|255076159|ref|XP_002501754.1| flap endonuclease-1 [Micromonas sp. RCC299]
gi|317374911|sp|C1E3X9.1|FEN1_MICSR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|226517018|gb|ACO63012.1| flap endonuclease-1 [Micromonas sp. RCC299]
Length = 384
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L IK + VFDG+ K R+ KR++ ++ + E + +++V V
Sbjct: 75 MLKAGIKPVYVFDGKPPTMKGGELAKRKDKREAAESALEKAKEAGDQEEIEKLSKRTVRV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + V++ R G+ AP EA+A A L AG +ED D L F K+
Sbjct: 135 SKVHSEEVMKLARFLGLPVFEAPCEAEATCAALCKAGLVYAAASEDMDTLCFSTPKLARN 194
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
L + D +KL + L++ +F D +CIL GCDY IKG+G A
Sbjct: 195 LMAPSSQEKPILEFDFDKLLAGLELTWDQFID-----VCILCGCDYCDSIKGIGPVNALK 249
Query: 183 YV 184
Y+
Sbjct: 250 YI 251
>gi|195473066|ref|XP_002088817.1| GE18773 [Drosophila yakuba]
gi|194174918|gb|EDW88529.1| GE18773 [Drosophila yakuba]
Length = 1237
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 851 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 910
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK + N ++ E++ K + C++ G DY TGI G+G
Sbjct: 911 -RTVYKNFFAQNKHVLEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIG 962
>gi|292656986|ref|YP_003536883.1| DNA repair flap endonuclease Fen1 [Haloferax volcanii DS2]
gi|448293584|ref|ZP_21483689.1| flap endonuclease-1 [Haloferax volcanii DS2]
gi|291370541|gb|ADE02768.1| DNA repair flap endonuclease Fen1 [Haloferax volcanii DS2]
gi|445570445|gb|ELY25008.1| flap endonuclease-1 [Haloferax volcanii DS2]
Length = 326
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 17/186 (9%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA---- 56
++ I H + + VFDG K+ RR++R+ + + E EA
Sbjct: 64 VQGIPKFFEHDLTPVFVFDGGVTEMKDDEVAKRREQREKAEERLEEAREAGDAVEAARME 123
Query: 57 --QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
L +++ T + L+++ V + AP E +AQ +Y+ G ADYV +ED D
Sbjct: 124 ARTQRLTETIQDTSRELLSLLD------VPVVEAPAEGEAQASYMARKGDADYVGSEDYD 177
Query: 115 LLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
L+FGA + +L GN MD + + + D + +L G D+ GI G
Sbjct: 178 TLLFGAPYTLRQLTSKGNPELMDLDATLDKHDITYEQLVD-----IAMLCGTDFNEGITG 232
Query: 175 MGLKKA 180
+G K A
Sbjct: 233 IGPKTA 238
>gi|15897130|ref|NP_341735.1| flap endonuclease-1 [Sulfolobus solfataricus P2]
gi|284174372|ref|ZP_06388341.1| flap endonuclease-1 [Sulfolobus solfataricus 98/2]
gi|25310048|pir||F90158 DNA repair endo/exonuclease FEN-1 (RAD2) (rad2) [imported] -
Sulfolobus solfataricus
gi|13813313|gb|AAK40525.1| DNA repair endo/exonuclease FEN-1 (RAD2) (rad2) [Sulfolobus
solfataricus P2]
Length = 302
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 21 ILEEGVIPIYVFDGKPPEQKSEELERRRKAKEEAERKLERAKSEGKIEELRKYSQAILRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M + RA G+ + AP E +A+ AYLN G + ++D D ++FGAK+++
Sbjct: 81 SNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDYDAILFGAKRLVRN 140
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + + + T + + IL G DY GI+G+G
Sbjct: 141 LTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIGTDYNPDGIRGIG- 199
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K+ + + +FL V
Sbjct: 200 ------------P--ERALKIIKKYGKIEKAMEYGEISKKDINFNIDEIRGLFLNPQVVK 245
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 246 P--EEALDLN 253
>gi|49619155|gb|AAT68162.1| flap structure specific endonuclease 1 [Danio rerio]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL----RQ 62
+L IK + VFDG+ K E R ++R A+A +LL + + Q ++ ++
Sbjct: 74 MLESGIKPVYVFDGKPPQLKSGELEKRVERR----AEAEKLLAQAQEAGEQENIDKFSKR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + GV I AP EA+A A L AG TED L FG
Sbjct: 130 LVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDMAGLTFGTTV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A K+P+ +F T +F +CIL GCDY
Sbjct: 190 LLRHLTAS------------EAKKLPIQEFHFSRILQDMELTHQQFIDLCILLGCDYCGT 237
Query: 172 IKGMGLKKAKDYV 184
IKG+G K+A D +
Sbjct: 238 IKGIGPKRAIDLI 250
>gi|28380021|sp|Q980U8.2|FEN_SULSO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 349
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 68 ILEEGVIPIYVFDGKPPEQKSEELERRRKAKEEAERKLERAKSEGKIEELRKYSQAILRL 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M + RA G+ + AP E +A+ AYLN G + ++D D ++FGAK+++
Sbjct: 128 SNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDYDAILFGAKRLVRN 187
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + + + T + + IL G DY GI+G+G
Sbjct: 188 LTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIGTDYNPDGIRGIG- 246
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K+ + + +FL V
Sbjct: 247 ------------P--ERALKIIKKYGKIEKAMEYGEISKKDINFNIDEIRGLFLNPQVVK 292
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 293 P--EEALDLN 300
>gi|397780742|ref|YP_006545215.1| flap endonuclease-1 [Methanoculleus bourgensis MS2]
gi|396939244|emb|CCJ36499.1| flap endonuclease-1 [Methanoculleus bourgensis MS2]
Length = 333
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 14/190 (7%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L IK + VFDG+ K+ T E RR+ R+ +A A L G +++ + S
Sbjct: 69 FLEKGIKPVFVFDGKPPEFKQETIEQRREVRN--RANEAWKAALKEGDMEEAYKQASA-- 124
Query: 67 THKMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+ ++ ++I++ G+ + AP E +AQ A++ +G Y +++D D L+FG+
Sbjct: 125 STRIDRHIIESSHELLDLLGIPVVQAPSEGEAQAAHMVRSGGVTYAVSQDYDSLLFGSPV 184
Query: 123 IIYKLDLS------GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
++ L +S G ++ E+ + + T + + IL G D+ GI+G+G
Sbjct: 185 LVRNLTVSGRRKARGRTITVNPERFVLSSVLDRLGVTREQLIEIGILVGTDFNPGIRGVG 244
Query: 177 LKKAKDYVFS 186
K A V S
Sbjct: 245 GKTALKVVRS 254
>gi|448578528|ref|ZP_21643963.1| flap endonuclease-1 [Haloferax larsenii JCM 13917]
gi|445727069|gb|ELZ78685.1| flap endonuclease-1 [Haloferax larsenii JCM 13917]
Length = 326
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 20/227 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
H + + VFDG K+ RR++R+ + + E EA ++ +
Sbjct: 70 FFEHDLTPVFVFDGGVTEMKDDEVAKRREQREKAEERLEEAREAGDAVEAARMEARTQRL 129
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + V + AP E +AQ +Y+ G ADYV +ED D L+FGA + +
Sbjct: 130 TDTIQETSRELLSLLDVPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
L GN MD + + + D + +L G D+ GI G+G K
Sbjct: 190 LTSKGNPELMDLDATLDKHDITWEQLVD-----IAMLCGTDFNEGISGVGPK-------- 236
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
A++++ +G + + ++ + + + FL PV D
Sbjct: 237 -------TAVKEVKKHGDLWAVLEARGDSIPNADRVREFFLDPPVTD 276
>gi|116668192|pdb|2IZO|A Chain A, Structure Of An Archaeal Pcna1-Pcna2-Fen1 Complex
Length = 346
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 65 ILEEGVIPIYVFDGKPPEQKSEELERRRKAKEEAERKLERAKSEGKIEELRKYSQAILRL 124
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M + RA G+ + AP E +A+ AYLN G + ++D D ++FGAK+++
Sbjct: 125 SNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDYDAILFGAKRLVRN 184
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + + + T + + IL G DY GI+G+G
Sbjct: 185 LTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIGTDYNPDGIRGIG- 243
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K+ + + +FL V
Sbjct: 244 ------------P--ERALKIIKKYGKIEKAMEYGEISKKDINFNIDEIRGLFLNPQVVK 289
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 290 P--EEALDLN 297
>gi|374632950|ref|ZP_09705317.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
gi|373524434|gb|EHP69311.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
Length = 301
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ + + VFDG+ K E+RR+ ++ + K + L + E + + + S +
Sbjct: 21 LIEEGVIPVYVFDGKPPELKMEELENRRRLKEEAERKLVKAKELGKLEEMRKYSQMSSRL 80
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T MA + GV + AP E +A+ AYLN ++D D L+FGAK++I
Sbjct: 81 TKGMAEESKELLSRMGVPIVNAPSEGEAEAAYLNYKNITFAAASQDYDSLLFGAKRLIRN 140
Query: 127 LDLSGNCCFMDR----EKLPSALKMP--LAK--FTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E P +++ L K T + + IL G DY GIKG+G
Sbjct: 141 LTITGKRKLPNKDVYVEIKPEMIELDELLRKLGLTREQLIDVAILIGTDYNPDGIKGIGP 200
Query: 178 KKA 180
K A
Sbjct: 201 KTA 203
>gi|147920854|ref|YP_685339.1| flap endonuclease-1 [Methanocella arvoryzae MRE50]
gi|121690538|sp|Q0W6I0.1|FEN_UNCMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|110620735|emb|CAJ36013.1| flap structure-specific endonuclease [Methanocella arvoryzae MRE50]
Length = 340
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 9/182 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ +K + VFDG+ K T + R + R++ + + E +EA + + S +
Sbjct: 68 LVEEGMKPVFVFDGKPPSFKAETIKARAEVREAAR-QMYEAAKAAGSAEAYKYAQASTSI 126
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ + G+ IVAP E +AQ AY+ G ADYV ++D D L+FGA +++
Sbjct: 127 NRQIVDDAKVLLGYMGIPFIVAPSEGEAQAAYMVSRGAADYVGSQDYDSLLFGAPRVVRN 186
Query: 127 LDLSG------NCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ ++G +MD + L+ LA T + M IL G DY GI +G K
Sbjct: 187 IAITGKRKVPRKNIYMDVKPEVIELQEVLATLGLTREELIDMAILVGTDYNPGIFKVGPK 246
Query: 179 KA 180
A
Sbjct: 247 TA 248
>gi|407916553|gb|EKG09919.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 392
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKA-AELLILDRGSEAQSHLRQSVD 65
++ + IK + VFDG P ++ E +R +R S +A E + + R++V
Sbjct: 74 MVDNGIKPLFVFDGAP-PKLKSGELAKRFQRKSEAQEAHEEAKETGTAEDVEKFSRRTVR 132
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
VT + + + G+ I+AP EA+AQ A L AG +ED D L F + ++
Sbjct: 133 VTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLTFNSPVLLR 192
Query: 126 KLDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L S + +K+ L+M +F D +CIL GCDY IKG+G
Sbjct: 193 HLTFSEQRKEPIQEIHLDKVLEGLEMEREQFID-----LCILLGCDYLDPIKGVG 242
>gi|336365482|gb|EGN93832.1| hypothetical protein SERLA73DRAFT_188945 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378041|gb|EGO19200.1| hypothetical protein SERLADRAFT_479560 [Serpula lacrymans var.
lacrymans S7.9]
Length = 407
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K R +KR+ K + E + + R++V V
Sbjct: 75 IVENGIKPVYVFDGKPPEMKAGVLSKRFEKREEAKEEGEEAKEIGTAEDMDKFSRRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + G+ +VAP EA+AQ A L G +ED D L F A ++
Sbjct: 135 TREHNEECRRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFSAPILLRH 194
Query: 127 LDLS----GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S ++ ++ L+M ++ FTD +CIL GCDY IKG+G K A
Sbjct: 195 LTFSEARKAPISEINLQRALEGLEMDMSLFTD-----LCILLGCDYLEPIKGVGPKSA 247
>gi|297619418|ref|YP_003707523.1| flap structure-specific endonuclease [Methanococcus voltae A3]
gi|297378395|gb|ADI36550.1| flap structure-specific endonuclease [Methanococcus voltae A3]
Length = 327
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML + I VFDG+ KE T E+RRK R KA ++ + E ++
Sbjct: 64 KTINML-EMGLTPIWVFDGQAHELKEITREERRKTR----QKALSEYLVAKKEEDTEKMQ 118
Query: 62 QSVDVTHKMALNVIQACRA----RGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLV 117
+ + + N++ C+ GV + + E +AQ A + G A V+++D D L+
Sbjct: 119 KFAKRMNYLDTNMVLNCKRLLDLMGVPHLTSGSEGEAQCAEIVKKGDAFAVVSQDYDSLL 178
Query: 118 FGAKKIIYKLDLSGNCCF--MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKG 174
+GA ++I + S + F ++ + + L + ++ D M IL G DY G+KG
Sbjct: 179 YGADRVIRNITSSSSKEFEYIELKDVLDELDINRSQLID-----MSILIGTDYNPKGVKG 233
Query: 175 MGLKKAKDYV----FSIMDPDFEN--ALRKI 199
+G KKA D V P+ EN +RKI
Sbjct: 234 LGPKKALDVVKNNQMEKYAPEIENYSEIRKI 264
>gi|290997255|ref|XP_002681197.1| predicted protein [Naegleria gruberi]
gi|317374913|sp|D2V434.1|FEN1_NAEGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|284094820|gb|EFC48453.1| predicted protein [Naegleria gruberi]
Length = 387
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL--RQSV 64
+L + IK VFDG+ P ++ E ++RK+R +A L + G E + + +++
Sbjct: 74 MLEYGIKPCYVFDGKP-PQLKSGELEKRKER-QKEAMEQFALAQEEGDEEKMVMWNKRTT 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+T + + + + R GV + AP EA+AQ A L G TED D L + +
Sbjct: 132 RMTKEQSNDGKKLLRLMGVPVVEAPGEAEAQCAELCKGGLVYATATEDMDALTYATPVLA 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIK 173
L S A K P+ +FT + F +CIL GCDY IK
Sbjct: 192 RHLTFS------------EARKQPIQEFTFKQVIEGLGVTVDQFIDICILCGCDYTDSIK 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGK 204
G+G KKA + + EN L+ N+ GK
Sbjct: 240 GIGPKKALAMIKKY--GNIENLLK--NIEGK 266
>gi|194863176|ref|XP_001970313.1| GG10553 [Drosophila erecta]
gi|190662180|gb|EDV59372.1| GG10553 [Drosophila erecta]
Length = 1237
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+++ + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 851 RMGMSISQRMSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGG 910
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ +YK + N ++ E++ K + C++ G DY TGI G+G
Sbjct: 911 -RTVYKNFFAQNKHVLEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIGAV 964
Query: 179 KAKDYVFSIMDPD 191
A + + S D
Sbjct: 965 TALEILASFSGQD 977
>gi|440296320|gb|ELP89147.1| hypothetical protein EIN_485090 [Entamoeba invadens IP1]
Length = 688
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 74 VIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNC 133
V + A + + +P+EA+AQ AY N DYV + DSD+ VFGAK +I + G
Sbjct: 468 VFEMVTALEIPHVFSPWEAEAQCAYYNKTKMCDYVASNDSDVFVFGAKNVIRNFLIDGEV 527
Query: 134 CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ A T K+ ++ +L G D+ G+ +G K+A
Sbjct: 528 A-----------TIHTANLTQEKYIFLALLLGSDFTEGVGKVGPKRA 563
>gi|384433639|ref|YP_005642997.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
gi|261601793|gb|ACX91396.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
Length = 351
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 30/250 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
+L + I VFDG+ K E RRK ++ + K + E + + + + +
Sbjct: 70 ILEEGVIPIYVFDGKPPEQKSEELERRRKAKEEAERKLERAKSEGKIEELRKYSQAILRL 129
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
++ M + RA G+ + AP E +A+ AYLN G + ++D D ++FGAK+++
Sbjct: 130 SNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDYDAILFGAKRLVRN 189
Query: 127 LDLSGNCCFMDR--------EKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGL 177
L ++G ++ E + + + + T + + IL G DY GI+G+G
Sbjct: 190 LTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIGTDYNPDGIRGIG- 248
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIG---SYVKITKEFLT-SFHNTNLMFLYQPVYD 233
P E AL+ I YGKI Y +I+K+ + + +FL V
Sbjct: 249 ------------P--ERALKIIKKYGKIEKAMEYGEISKKDINFNIDEIRGLFLNPQVVK 294
Query: 234 PVSKEVVPLN 243
P +E + LN
Sbjct: 295 P--EEALDLN 302
>gi|222480031|ref|YP_002566268.1| flap endonuclease-1 [Halorubrum lacusprofundi ATCC 49239]
gi|222452933|gb|ACM57198.1| XPG I domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 325
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQSVDVT 67
H + +MVFDG K DRR+KR+ +A+ + +RG EA ++ +T
Sbjct: 73 HDLIPVMVFDGAVTELKADEVADRREKRE--QAEERRVAAKERGDAVEAARLEARTQRLT 130
Query: 68 HKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKL 127
+ + R V + AP E +AQ A++ G D+ +ED D L+FGA + +L
Sbjct: 131 DTIQETTRELLRLLDVPIVEAPAEGEAQCAHMAATGTVDHAGSEDYDTLLFGAPTTLRQL 190
Query: 128 DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
G+ MD L DA +L G D+ G++G+G K A
Sbjct: 191 TSKGDPELMDLAATLDDLGFDRQGLVDA-----AMLCGTDFNEGVRGIGPKTA 238
>gi|68488283|ref|XP_712017.1| hypothetical protein CaO19.8267 [Candida albicans SC5314]
gi|46433375|gb|EAK92818.1| hypothetical protein CaO19.8267 [Candida albicans SC5314]
Length = 684
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 42/207 (20%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I L+ I VI+VFDG P K ++E+ ++ + L ++ SE +
Sbjct: 67 MAKILALVGLNISVIVVFDGILKPLKLKSKENEGL---IYEDELQRLALISNYSENNPFV 123
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q K+ L+ ++ + AP E +AQ AYL G DYVI++D D LVFGA
Sbjct: 124 EQ-----LKIELS------NNKIEYVQAPGEGEAQCAYLQKLGIVDYVISQDVDALVFGA 172
Query: 121 KKIIYKL---------------DLSGNCCF------MDREKLPSALKMPLAKFTDAKFRY 159
++++ D++ + MD+ + + L ++ +
Sbjct: 173 RRVLRNFSRFAEDIGKSPPKSSDITARSSYYVTPVDMDKVEQETGL-------ATSRLVF 225
Query: 160 MCILSGCDYWTGIKGMGLKKAKDYVFS 186
+ L G DY G K MG+ AK+ S
Sbjct: 226 LASLRGGDYSVGAKKMGIVNAKNLALS 252
>gi|430812753|emb|CCJ29874.1| unnamed protein product [Pneumocystis jirovecii]
Length = 225
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R++V +T + + + G+ + AP EA+AQ A L AG +ED D+L F
Sbjct: 6 RRTVRMTREHNEECKKLLKLMGIPYVDAPCEAEAQCAALAKAGKVYAAASEDMDILCFST 65
Query: 121 KKIIYKLDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
++ L S ++ EK L MPL +F D +CIL GCDY IKG+G
Sbjct: 66 PILLRHLTFSEQKKEPITEVNLEKALKELNMPLEQFVD-----LCILLGCDYCEPIKGIG 120
Query: 177 LKKAKDYV 184
K+A + +
Sbjct: 121 PKRALELI 128
>gi|254168936|ref|ZP_04875776.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|197622200|gb|EDY34775.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
Length = 339
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LA IK + VFDGR K T +R K R K + L EA+S +Q+ +
Sbjct: 68 FLAEGIKPVYVFDGRPPELKMRTIGERIKIRMEAKEAWEKALKEGNLEEARSKAQQATFL 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + G+ + AP E +AQ AY+ G ++D D L+FGA ++
Sbjct: 128 TKNMVDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDFDSLLFGAPNLVRN 187
Query: 127 LDLSG------NCCFMDREKLPSALKMPLAKFTDAKFRY--MCILSGCDYWTGIKGMGLK 178
L ++G ++D + L+ L ++ + + IL G DY GIKG+G K
Sbjct: 188 LAITGKRKLPRKNVYVDVKPEIILLEENLKNLGISREQLVDIGILVGTDYNEGIKGVGPK 247
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
AL+ I YG + ++ + + +FL PV D
Sbjct: 248 ---------------TALKLIKKYGSLEKIIQERGYTIPHYKEIKDIFLNPPVTD 287
>gi|395332541|gb|EJF64920.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 1217
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 55 EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
+ ++ +R S D+T +M ++ R G+ I AP EA+AQ A L G D +IT+DSD
Sbjct: 790 QKKNAMRDSEDITQQMISQIMIMLRLFGIPYITAPMEAEAQCAALLSLGLVDGIITDDSD 849
Query: 115 LLVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+ +FG +++ + CF L + L+ L D R +L G DY G+
Sbjct: 850 VFLFGGGRVLKNMFNQSKTVECF-----LTTDLERELGLDRDKLVRLAYLL-GSDYTEGL 903
Query: 173 KGMG 176
G+G
Sbjct: 904 PGVG 907
>gi|335433586|ref|ZP_08558406.1| flap endonuclease-1 [Halorhabdus tiamatea SARL4B]
gi|334898592|gb|EGM36696.1| flap endonuclease-1 [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKA--KAAELLILDRGSEAQSHLRQSVDVTHKMAL 72
+ VFDG K+ + RR++R+ ++ +AA + G Q +S T ++
Sbjct: 78 VFVFDGAVTDLKDDEVKRRREQREQYEEDLEAAR----EEGDAIQVARLESR--TQRLTD 131
Query: 73 NVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
+I+ R V + AP E +AQ AY+ G ADYV TED D L+FGA + +L
Sbjct: 132 VIIETTRKLLGLLDVPIVDAPAEGEAQAAYMARRGDADYVGTEDYDALLFGAPYTLRQLT 191
Query: 129 LSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
SG+ MD E + + + D + +L G D+ G++G G K A
Sbjct: 192 SSGDPELMDFEATLAEHDLSWEQLVD-----VALLCGTDFNEGVRGYGPKTA 238
>gi|74612809|sp|Q76F73.1|FEN1_COPCI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46092541|dbj|BAD14303.1| flap endonuclease-1 [Coprinopsis cinerea]
Length = 458
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K+ R +KR+ K + E + + R++V V
Sbjct: 75 IVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAKEEGEEAKEIGTAEDVDRFSRRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R V C++AP EA+AQ A L G +ED D L F A +
Sbjct: 135 TKQHNEECQKLLRLMSVPCVIAPSEAEAQCAELARGGKVYAAGSEDMDTLTFNAPILFRH 194
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S ++ E L M +++F D +CIL GCDY IKG+G K A
Sbjct: 195 LTFSEAKKQPISEINLEAALKGLDMDMSQFVD-----LCILLGCDYLEPIKGVGPKSA 247
>gi|401424227|ref|XP_003876599.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492842|emb|CBZ28120.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 395
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 35/191 (18%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKK-----RDSHKAK-AAELLILDRGSEAQSHL 60
++ IK I VFDG+ K E RR+K ++ KAK A + ++++ S+ +
Sbjct: 78 MIDEGIKPIYVFDGKPPKLKADELEARRQKAAEAEKEFEKAKDAGDDEMMEKMSKRTVRV 137
Query: 61 -RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFG 119
R+ +D + K+ R G+ I AP EA+AQ A L G A V TED D L FG
Sbjct: 138 SREQIDESKKL-------LRLMGIPVIQAPSEAEAQCAELVKKGKAWAVGTEDMDALTFG 190
Query: 120 AKKIIYKLDLSGNCCFMDREKLPSA----------LKMPLAKFTDAKFRYMCILSGCDYW 169
+ ++ L++S D +K P A + + +F D +CIL GCDY
Sbjct: 191 STIMLRHLNIS------DAKKRPVAEIHLDEVLQTTGLSMDQFVD-----LCILLGCDYV 239
Query: 170 TGIKGMGLKKA 180
+ G+G +KA
Sbjct: 240 PKVPGIGPQKA 250
>gi|304313993|ref|YP_003849140.1| flap structure-specific endonuclease [Methanothermobacter
marburgensis str. Marburg]
gi|302587452|gb|ADL57827.1| flap structure-specific endonuclease [Methanothermobacter
marburgensis str. Marburg]
Length = 328
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 20/195 (10%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEE-DRRKKRDSHKAKAAELLILDRGSE---AQSHL 60
++ I++ VFDG+ HL + T + RKK + +A E ++R + S +
Sbjct: 68 VMERDIRMAYVFDGKSHHLKGETVTRRIETRKKSEVEWRRALEEGDIERARKYAVRSSRM 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q + + K L ++ G+ + AP E +AQ +++ G A V ++D D L+FGA
Sbjct: 128 SQDIVESSKRLLELL------GIPYVQAPGEGEAQASFIVRRGDAWAVASQDYDCLLFGA 181
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG---- 176
+++ L LSG + +L SAL+ T + + +L G D+ GIKG+G
Sbjct: 182 PRVVRNLTLSGKLEEPEIIELESALRN--LSITHEQLVDLALLVGTDFNDGIKGIGARRG 239
Query: 177 --LKKAKDYVFSIMD 189
L K K VFS+++
Sbjct: 240 LKLIKEKGDVFSVIE 254
>gi|449676998|ref|XP_002156033.2| PREDICTED: DNA repair protein complementing XP-G cells-like,
partial [Hydra magnipapillata]
Length = 431
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATE-----EDRRKKRDSHKAKAAELLILDRGSEAQS 58
I LL + IK + VFDG K+ T+ ED K + EL + E +
Sbjct: 32 ICKLLFYGIKPVFVFDGNVPELKKNTQVIAKIEDFLKLEVELNKEKIELEL-----ETRK 86
Query: 59 HLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVF 118
RQ+ ++ ++ +V + G+ +V+P EA+AQ A LN+ + IT+DSD+ +F
Sbjct: 87 QTRQAATLSAEVYNDVQDLLQLFGIPYLVSPMEAEAQCAALNLLKLTNGTITDDSDIFLF 146
Query: 119 GAKKIIYKLDLSGNCCFMDREKLPSALKM----PLAKFTDAKFRYMCILSGCDYWTGIKG 174
GA+ +YK +++K+P L T K + L+G DY G+ G
Sbjct: 147 GAEN-VYK-------NIFNKDKIPECYSSKDLETLLYLTREKLIAVAFLTGSDYTEGLPG 198
Query: 175 MG 176
+G
Sbjct: 199 VG 200
>gi|405964237|gb|EKC29743.1| Flap endonuclease GEN-like protein 1 [Crassostrea gigas]
Length = 417
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 15/114 (13%)
Query: 73 NVIQAC----RARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
++++ C + G+ CI AP EA+A A+L+ G D V+T DSD L++GA+ Y +D
Sbjct: 43 SIVEKCFEVLKCLGLPCIKAPGEAEAYCAWLDENGLVDGVLTSDSDALLYGARTFDYAVD 102
Query: 129 LSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
L +R L M T M +L GCDY GI+ +G++KA++
Sbjct: 103 LYEMSVIEER------LGM-----TRETLVAMAMLVGCDYDEGIRDIGIEKAQE 145
>gi|302688649|ref|XP_003034004.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
gi|300107699|gb|EFI99101.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
Length = 452
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K+ R +KRD K E +E R+ V V
Sbjct: 75 IVENGIKPAYVFDGKPPDLKKGVLSKRFEKRDEAKEGEEEAKETGTAAEVDKFSRRQVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + G+ + AP EA+AQ A L G +ED D L F A +
Sbjct: 135 TREHNEECRRLLKLMGIPYVEAPSEAEAQCAELARGGKVYAAGSEDMDTLTFNAPILFRH 194
Query: 127 LDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L +S + +K P L M L+ F D +CIL GCDY IKG+G
Sbjct: 195 LTVS------EAKKQPILEINLKAALEGLDMDLSMFVD-----LCILLGCDYLEPIKGVG 243
Query: 177 LKKA 180
K A
Sbjct: 244 PKSA 247
>gi|451927433|gb|AGF85311.1| endonuclease of the XPG family [Moumouvirus goulette]
Length = 431
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
+ L + + I VFDG+ K T + RR K+D+ + K L +LD SE + +++
Sbjct: 74 VFLQNGMTPICVFDGKAPDIKNKTVDLRRSKKDAAEKK---LEVLD-DSEDEEYIKNFKQ 129
Query: 66 VTHKMALNVIQA---CRARGVDCIVAPFEADAQMAYL------NIAGYADYVITEDSDLL 116
++I+A G+ I+AP EAD ++L N Y V ++DSD+L
Sbjct: 130 TFTPSKRDIIEAQILLDLMGIPYIIAPGEADVVCSWLAARRDENGKRYVKGVCSDDSDML 189
Query: 117 VFGA----KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
GA K ++ + + + K + + + +FTD +C+L GCDY I
Sbjct: 190 ALGAPYLFKDMLKFMSKNKEVTIISLNKTLTKTGLTMRQFTD-----LCVLLGCDYCDNI 244
Query: 173 KGMGLKKA 180
KG+G K A
Sbjct: 245 KGVGPKTA 252
>gi|294660024|ref|XP_462477.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
gi|199434412|emb|CAG90987.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
Length = 1034
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + R G+ I AP EA+AQ A L D +IT+DSD
Sbjct: 758 QKAKRDSDEVTETMIRDVQELLRRFGIPYITAPMEAEAQCAELLKLNLVDGIITDDSDCF 817
Query: 117 VFGAKKI---IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+FG K+ ++ C M+ + S + + K D + +L G DY GIK
Sbjct: 818 LFGGDKVYKNMFNQKQYVECYIMN--DINSRMGLSQEKLID-----LALLLGSDYTEGIK 870
Query: 174 GMG 176
G+G
Sbjct: 871 GIG 873
>gi|168014475|ref|XP_001759777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374864|sp|A9S0B8.1|FEN11_PHYPA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|162688907|gb|EDQ75281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 394
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 35/191 (18%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLIL--DRGSEA--QSHL 60
+L +K + VFDG+ L +E KR + + AAE L+ + G+EA + +
Sbjct: 75 VLEAGLKPVYVFDGQPPDLKKRELA------KRFARREDAAEDLVTAKETGNEADVEKYS 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V VT + + + R GV + AP EA+A+ A L A V +ED D L +G+
Sbjct: 129 KKTVKVTKQHNEDCRKLLRLMGVPVVEAPSEAEAECASLCKAEKVFAVASEDMDSLTYGS 188
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYW 169
+ + L M+ P++ K+P+ +F AK F +CIL GCDY
Sbjct: 189 TRFLRHL--------ME----PTSRKLPVLEFDIAKVLEGLGLNMDQFVDLCILCGCDYC 236
Query: 170 TGIKGMGLKKA 180
I+G+G + A
Sbjct: 237 DTIRGIGPQTA 247
>gi|409048860|gb|EKM58338.1| hypothetical protein PHACADRAFT_193460 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1225
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 60 LRQSVDVTHKMALNVIQAC----RARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDL 115
+R S D+TH+M V+ R G+ I AP EA+AQ A L G D +IT+DSD+
Sbjct: 827 MRDSEDITHQMISQVMHGAEMMLRLFGIPYITAPMEAEAQCAELLALGLVDGIITDDSDV 886
Query: 116 LVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+FG +++ + CF L S L L K + L G DY G+
Sbjct: 887 FLFGGARVLKNMFNQSKTVECF-----LLSDLGRELG-LEREKLIRLAYLLGSDYTEGLP 940
Query: 174 GMG 176
G+G
Sbjct: 941 GVG 943
>gi|452824082|gb|EME31087.1| DNA excision repair protein ERCC-5 [Galdieria sulphuraria]
Length = 928
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 58 SHLRQSVDV-THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
+HL+ D+ T +M + + R G+ I AP EA+AQ AY + G + V+TEDSD
Sbjct: 601 THLKSGSDIITDEMCEEIRELLRMLGIPYIQAPMEAEAQCAYFSQVGLVEGVVTEDSDAF 660
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF---TDAKFRYMCILSGCDYWTGIK 173
+FGAK + + F D++ + + ++ K + +L G DY GI
Sbjct: 661 LFGAKTVFRNI-------FEDKKYVEQYEMEDIERYLGLNREKLILLSLLLGSDYTQGIH 713
Query: 174 GMGLKKAKDYVFSIMDPDFE 193
G+G+ A + + + P FE
Sbjct: 714 GVGVVNATEIMRAF--PSFE 731
>gi|190346361|gb|EDK38425.2| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC
6260]
Length = 1035
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT M +V + + G+ I AP EA+AQ A L G D +IT+DSD +FG
Sbjct: 766 RDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELMKLGLVDGIITDDSDCFLFGG 825
Query: 121 KKI---IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+K+ ++ C F+D L + +L G DY GIKG+G
Sbjct: 826 QKVYKNMFNQKQYVECYFIDEISHKVGLDQ-------KNLIELALLLGSDYTEGIKGIG 877
>gi|146417652|ref|XP_001484794.1| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC
6260]
Length = 1035
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT M +V + + G+ I AP EA+AQ A L G D +IT+DSD +FG
Sbjct: 766 RDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELMKLGLVDGIITDDSDCFLFGG 825
Query: 121 KKI---IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+K+ ++ C F+D L + +L G DY GIKG+G
Sbjct: 826 QKVYKNMFNQKQYVECYFIDEISHKVGLDQ-------KNLIELALLLGSDYTEGIKGIG 877
>gi|241958698|ref|XP_002422068.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223645413|emb|CAX40069.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 686
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 42/207 (20%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M I L+ I V++VFDG P K ++E+ ++ + L ++ SE +
Sbjct: 67 MAKILALVGLNISVVIVFDGILKPFKLKSKENEGL---VYEDELQRLSLVSNYSENNPFV 123
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
Q + + + ++ + AP E +AQ AYL G DYVI++D D LVFGA
Sbjct: 124 EQ-------LKIELFN----NKIEYVQAPGEGEAQCAYLQKLGIVDYVISQDVDALVFGA 172
Query: 121 KKIIYKL---------------DLSGNCCF------MDREKLPSALKMPLAKFTDAKFRY 159
++++ D++ + MD+ + + L T ++ +
Sbjct: 173 RQVLRNFSRFAEDIGKSPPKTSDITARSSYYVTPVDMDKVEQETGL-------TTSRLIF 225
Query: 160 MCILSGCDYWTGIKGMGLKKAKDYVFS 186
+ L G DY G K MG+ AK+ S
Sbjct: 226 LASLRGGDYSVGAKKMGIVNAKNLALS 252
>gi|327310721|ref|YP_004337618.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
gi|326947200|gb|AEA12306.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
Length = 346
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ I+ + VFDG+ K A E RR ++ + + R + + ++ + V
Sbjct: 72 LVEAGIRPVYVFDGKPPELKRAEIESRRAAKEKAREQMERAAAEGRAEDVAKYAKRVIYV 131
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T +MA + A G+ + AP E +AQ AY+ G ++D D L+FGA +++
Sbjct: 132 TDQMAEDAKALLTAMGIPWVQAPSEGEAQAAYMAARGSVWGAGSQDYDSLLFGAPRLVRN 191
Query: 127 LDLSGNCC-----------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWT-GIKG 174
L +S ++ +K+ ALK+ + + + IL G DY G+ G
Sbjct: 192 LAVSSRRKVGEEYVEVPPEVIELDKVLKALKLK----SREQLVDIAILLGTDYNPDGVPG 247
Query: 175 MGLKKAKDYVFSIMDPDFENALRKI 199
+G +KA + ENAL+ +
Sbjct: 248 VGPQKALKIILE--QGSLENALKTV 270
>gi|448583086|ref|ZP_21646555.1| flap endonuclease-1 [Haloferax gibbonsii ATCC 33959]
gi|445730043|gb|ELZ81635.1| flap endonuclease-1 [Haloferax gibbonsii ATCC 33959]
Length = 326
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAK------AAELLILDRGSEAQSHLRQS 63
H + + VFDG K+ RR++R+ + + A + + R L ++
Sbjct: 73 HDLTPVFVFDGGVTEMKDDEVAKRREQREKAEERLEAAREAGDAVEAARMEARTQRLTET 132
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
+ T + L+++ V + AP E +AQ +Y+ G ADYV +ED D L+FGA
Sbjct: 133 IQDTSRELLSLLD------VPVVEAPAEGEAQASYMARKGDADYVGSEDYDTLLFGAPYT 186
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ +L G+ MD + + + D + +L G D+ GI G+G K A
Sbjct: 187 LRQLTSKGDPELMDLDATLDKHDITWEQLVD-----IAMLCGTDFNEGITGIGPKTA 238
>gi|297600506|ref|NP_001049313.2| Os03g0205400 [Oryza sativa Japonica Group]
gi|255674294|dbj|BAF11227.2| Os03g0205400 [Oryza sativa Japonica Group]
Length = 1470
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ I+AP EA+AQ AY+ + D V+T+DSD+ +FGA+ + + F DR+ +
Sbjct: 868 GLPYIIAPMEAEAQCAYMEMTNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYV 920
Query: 142 PSALKMPLAK---FTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ L + T + M +L G DY GI G+G+ A
Sbjct: 921 ETYLMKDIESELGLTREQLIRMAMLLGSDYTEGISGIGIVNA 962
>gi|448689147|ref|ZP_21694884.1| flap endonuclease-1 [Haloarcula japonica DSM 6131]
gi|445779017|gb|EMA29959.1| flap endonuclease-1 [Haloarcula japonica DSM 6131]
Length = 326
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS-VDV-T 67
H + + VFDG K+ E RR++R+ ++++ L+ EA R + +D T
Sbjct: 73 HDMTPVFVFDGAVTDLKDDEVEKRREQREKYESE------LEEAREAGDSTRVAKLDSRT 126
Query: 68 HKMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
++ ++ R V + AP E + Q + + G DYV TED D L+FGA
Sbjct: 127 QRLTDTIVDTTRDLLELLDVPIVDAPAEGEGQASVMARRGDVDYVGTEDYDALLFGAPMT 186
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ ++ G+ MD E + + DA IL G D+ GI G+G K A
Sbjct: 187 LRQITSKGDPELMDFEATLERHDLTWEQLVDA-----AILMGTDFNEGISGIGPKTA 238
>gi|254166886|ref|ZP_04873740.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289596167|ref|YP_003482863.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
gi|197624496|gb|EDY37057.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289533954|gb|ADD08301.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
Length = 339
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LA IK + VFDGR K T +R K R K + L EA+S +Q+ +
Sbjct: 68 FLAEGIKPVYVFDGRPPELKMRTIGERIKIRMEAKEAWEKALKEGNLEEARSKAQQATFL 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T M + G+ + AP E +AQ AY+ G ++D D L+FGA ++
Sbjct: 128 TKDMVDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDFDSLLFGAPNLVRN 187
Query: 127 LDLSG------NCCFMDREKLPSALKMPLAKFTDAKFRY--MCILSGCDYWTGIKGMGLK 178
L ++G ++D + L+ L ++ + + IL G DY GIKG+G K
Sbjct: 188 LAITGKRKLPRKNVYVDVKPEIILLEENLKNLGISREQLVDIGILVGTDYNEGIKGVGPK 247
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
AL+ I YG + ++ + + +FL PV D
Sbjct: 248 ---------------TALKLIKKYGSLEKIIQERGYTIPHYKEIKDIFLNPPVTD 287
>gi|242041837|ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
gi|241922167|gb|EER95311.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
Length = 1489
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ I+AP EA+AQ AY+ I D V+T+DSD+ +FGA+ + + F DR+ +
Sbjct: 881 GLPYIIAPTEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYV 933
Query: 142 PSALKMPLAK---FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ + T + M +L G DY G+ G+G+ A + V + + D
Sbjct: 934 ETYFMKDIESELGLTREQLIRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEED 986
>gi|307206657|gb|EFN84629.1| DNA-repair protein complementing XP-G cells [Harpegnathos saltator]
Length = 1139
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
RQ+ +++ ++ + + R G+ +VAP EA+AQ AYL D IT+DSD+ +FG
Sbjct: 755 RQATNISEQIRIEAQELLRLFGIPYVVAPMEAEAQCAYLEQIKLTDGTITDDSDIWLFGG 814
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALK----MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ +YK F + K + K T + + +L G DY TG+ G+G
Sbjct: 815 -RCVYK-------NFFNNSKRVQQFRACDIQHHFKLTRNQLIQLALLVGSDYTTGVAGIG 866
>gi|50287803|ref|XP_446331.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525638|emb|CAG59255.1| unnamed protein product [Candida glabrata]
Length = 992
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + +VT M +V + G+ I AP EA+AQ A L D +IT+DSD+ +FG
Sbjct: 723 RDADEVTMDMIKDVQELLARFGIPYITAPMEAEAQCAELVNLKLVDGIITDDSDVFLFGG 782
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
KK+ + N + D E + L + + + L G DY TGIKGMG
Sbjct: 783 KKVYKNMFQEKNYVEYYDSEDIYQGLGLTRETMIE-----LAQLLGSDYTTGIKGMG 834
>gi|440301029|gb|ELP93476.1| Flap endonuclease, putative [Entamoeba invadens IP1]
Length = 374
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS----EAQSHLRQ 62
L+ +K I VFDG+ P + TEE KKR ++ +A E L + S E + +++
Sbjct: 75 LMTSGVKPIYVFDGK--PPEMKTEE--LKKRQTNAKEAIEKLEKAKESGDKEEIKKQMKR 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+ +T + + +V + G+ I A EA+ A L +G TED D L G+
Sbjct: 131 TARMTKEQSDDVKKLVELMGIPAIEANCEAEGTCAELVKSGKCFATATEDMDALTLGSDI 190
Query: 123 IIYKLDLSGNCCFMDRE-KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
++ K S N RE L S L+ FT F +CIL GCDY IKG+G
Sbjct: 191 VLRKFSASDNKKEPIREYSLKSILEE--TGFTMDMFIDLCILLGCDYCETIKGIG 243
>gi|366994113|ref|XP_003676821.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
gi|342302688|emb|CCC70465.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
Length = 1000
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT +M +V + GV I AP EA+AQ A L D V+T+DSD+ +FG
Sbjct: 731 RDSDEVTPEMIQDVQELLSRFGVPYITAPMEAEAQCAELLQLKLVDGVVTDDSDVFLFGG 790
Query: 121 KKIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
KI + N F D E + L + + + L G DY GIKGMG
Sbjct: 791 SKIYKNMFHEKNYVEFYDSESILRNLGLDRENMIE-----LAELLGSDYTNGIKGMG 842
>gi|170093544|ref|XP_001877993.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646447|gb|EDR10692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 633
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 37/200 (18%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL +++VFDG P+++ RG + +VD
Sbjct: 80 LLRLPFTIVLVFDGPGRPSRK------------------------RGVNVLTAEHWAVDP 115
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T ++A A G AP EA+A++AYLN G D V++ED D LVFGA+ +I K
Sbjct: 116 TKEIA-------DAFGFGTHQAPGEAEAELAYLNSIGILDAVMSEDGDALVFGAQVVIRK 168
Query: 127 LDLSGNCCFMDREKL----PSALK-MPLAKFTDAKFRYMCILSGCDYWT-GIKGMGLKKA 180
L+G D + + +A++ P T +L G DY T G+KG G A
Sbjct: 169 PHLNGEKIKWDGDTVKIYTSTAIRSTPSVSLTQGDMVLYALLCGGDYDTVGLKGCGKVTA 228
Query: 181 KDYVFSIMDPDFENALRKIN 200
+ + + + NA + ++
Sbjct: 229 QKLMGTGLGDSLLNAAQSLS 248
>gi|336370553|gb|EGN98893.1| hypothetical protein SERLA73DRAFT_108084 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1055
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 55 EAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSD 114
+ ++ +R S D+T +M ++ R G+ I AP EA+AQ A L G D +IT+DSD
Sbjct: 728 QKKAAMRDSEDITQQMISQIMLLLRLFGIPYITAPMEAEAQCAELVSLGLVDGIITDDSD 787
Query: 115 LLVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 172
+ +FG +++ + CF+ + ++ L + T + Y+ G DY G+
Sbjct: 788 VFLFGGQRVFKNMFNQSKTVECFLLSDL---GRELGLERGTLIRLAYLL---GSDYVEGL 841
Query: 173 KGMG 176
G+G
Sbjct: 842 SGVG 845
>gi|448738796|ref|ZP_21720817.1| flap endonuclease-1 [Halococcus thailandensis JCM 13552]
gi|445801182|gb|EMA51526.1| flap endonuclease-1 [Halococcus thailandensis JCM 13552]
Length = 325
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 11/174 (6%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA---QSHLRQSVDV 66
H I +MVFDG K E RR++++ +A E EA +S ++ D
Sbjct: 73 HDITPVMVFDGGVTDLKTDEIEQRREQKEKAAKRAKEAREAGDAVEAARLESRTQRLTDT 132
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
H+ ++ V + AP E +AQ A++ G DY +ED D L+FGA + +
Sbjct: 133 IHETTRELLALLD---VPIVEAPAEGEAQAAHMARTGTVDYAGSEDYDTLLFGAPRTLRD 189
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L G+ M + + + D + IL G D+ G+ G+G K A
Sbjct: 190 LTSKGDPECMALDATLDEHDLTWEQLVD-----VGILCGTDFNDGVSGIGPKTA 238
>gi|392591810|gb|EIW81137.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 437
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K R +KR+ K + E + R++V V
Sbjct: 106 IVENGIKPAYVFDGKPPDLKSGVLSKRFEKREEAKEEGEEAKETGTAEDVDRFSRRTVRV 165
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R G+ IVAP EA+AQ A L G +ED D L F A ++
Sbjct: 166 TKEHNEECRRLLRLMGIPVIVAPSEAEAQCAELARGGKVYAAGSEDMDTLTFHAPVLLRH 225
Query: 127 LDLS----GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L S + E+ L+M +++F D +CIL GCDY IKG+G K A
Sbjct: 226 LTFSEAKKAPISEIHLERALQGLEMDMSQFID-----LCILLGCDYLEPIKGVGPKSA 278
>gi|451853401|gb|EMD66695.1| hypothetical protein COCSADRAFT_35197 [Cochliobolus sativus ND90Pr]
Length = 395
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG K R +++ +A A E + + R++V V
Sbjct: 74 MVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAQAAAEEAKETGTAEDVEKFSRRTVRV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + Q + G+ IVAP EA+AQ A L G +ED D L F + ++
Sbjct: 134 TKEHNAECQQLLKLMGIPYIVAPTEAEAQCATLAKGGKVYAAASEDMDTLTFASPILLRH 193
Query: 127 LDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L S + +K+ L+M +F D +CIL GCDY IKG+G
Sbjct: 194 LTFSEQRKEPILEIHLDKVLEGLEMDQKQFID-----LCILLGCDYLDPIKGIG 242
>gi|407851500|gb|EKG05394.1| hypothetical protein TCSYLVIO_003532 [Trypanosoma cruzi]
Length = 393
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-----RQSVDV 66
++ I VFDG+ P +A+E R++R A+ A+ L E L +++V V
Sbjct: 83 LRPIYVFDGKP-PTLKASELQERRQR----AEEAQQLFDTAKEEGNDELMEKMSKRTVRV 137
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ + AP EA+AQ A L A V TED D L FGA ++
Sbjct: 138 SREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAWAVATEDMDALTFGAPVMLRH 197
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K P+A+F T +F +CIL GCDY I G+
Sbjct: 198 LTYS------------EAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGCDYVPKISGI 245
Query: 176 GLKKA 180
G +KA
Sbjct: 246 GPQKA 250
>gi|397584761|gb|EJK53070.1| hypothetical protein THAOC_27560, partial [Thalassiosira oceanica]
Length = 299
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL----------ILDRGSEAQSHLR 61
+K+++ +G+H K E R+KK+ + +L+ ++D E + ++
Sbjct: 93 VKLLVCTEGKHHKYKGRVNEQRKKKQSGAQESVDKLVEQFKREPTSKLID---EIKKQMK 149
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
SV V + + + G+ + AP+EAD Q+ Y + G + IT DSD+ G+K
Sbjct: 150 YSVYVREDILAHAVDLLEENGIQVLSAPYEADFQLVYWELMGITEGTITVDSDIFCLGSK 209
Query: 122 KIIYKLDLS---GNCCFMDREKL--PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
++ L L G C ++++ + + L + ++D L GCD+ + G+
Sbjct: 210 LLVDNLSLQSKIGKCFLIEKKDVLDHNVLGSNTSSWSDNDLIIYLALCGCDFIRRLLGLK 269
Query: 177 LKKAKDYV 184
++ D++
Sbjct: 270 DEQITDFM 277
>gi|344211083|ref|YP_004795403.1| flap endonuclease-1 [Haloarcula hispanica ATCC 33960]
gi|343782438|gb|AEM56415.1| flap endonuclease-1 [Haloarcula hispanica ATCC 33960]
Length = 326
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 10 HKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS-VDV-T 67
H + + VFDG K+ E RR++R+ ++++ L+ EA R + +D T
Sbjct: 73 HDLTPVFVFDGAVTDLKDDEVEKRREQREKYESE------LEAAREAGDSTRVAKLDSRT 126
Query: 68 HKMALNVIQACRAR----GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
++ ++ R V + AP E + Q + + G DYV TED D L+FGA
Sbjct: 127 QRLTDTIVDTTRDLLELLDVPIVDAPAEGEGQASVMARRGDVDYVGTEDYDALLFGAPMT 186
Query: 124 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ ++ G+ MD E + + DA IL G D+ GI G+G K A
Sbjct: 187 LRQITSKGDPELMDFEATLEQHDLTWEQLVDA-----AILMGTDFNEGISGIGPKTA 238
>gi|374636521|ref|ZP_09708087.1| flap structure-specific endonuclease [Methanotorris formicicus
Mc-S-70]
gi|373558724|gb|EHP85052.1| flap structure-specific endonuclease [Methanotorris formicicus
Mc-S-70]
Length = 326
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
K I+ML + + + VFDG+ KE T E+RRK R+ K + + ++ E Q + +
Sbjct: 64 KTIYML-ENDVTPVWVFDGKPPKLKEKTREERRKMREKAKEEFIKAKEIENIEEMQKYAK 122
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
+ +T + N + G+ + AP E + Q +Y+ G V+++D D L++GA
Sbjct: 123 RMNFLTKDIVENSKKLLDLMGIPYVNAPAEGEGQASYMAKKGDVFCVVSQDYDALLYGAP 182
Query: 122 KIIYKLDLS-GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLKK 179
+++ L + ++ +++ + L + D M IL G DY G+KG+G KK
Sbjct: 183 RVVRNLTATKEELELIELKEVLNELGISHDDLID-----MAILIGTDYNPKGVKGIGPKK 237
Query: 180 A 180
A
Sbjct: 238 A 238
>gi|448530440|ref|XP_003870064.1| Rad2 protein [Candida orthopsilosis Co 90-125]
gi|380354418|emb|CCG23933.1| Rad2 protein [Candida orthopsilosis]
Length = 995
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + + G+ I AP EA+AQ A L G D +IT+DSD
Sbjct: 720 QKAKRDSDEVTENMISDVQELLKRFGIPYITAPMEAEAQCAELFRIGLVDGIITDDSDCF 779
Query: 117 VFGAKKI---IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+FG +I ++ C F D + + + + + IL G DY GIK
Sbjct: 780 LFGGDRIYKNMFNQKQFVECYFKD--DIEDRIGLSRENLIE-----LAILLGSDYTQGIK 832
Query: 174 GMG 176
G+G
Sbjct: 833 GIG 835
>gi|407414008|gb|EKF35678.1| hypothetical protein MOQ_002324 [Trypanosoma cruzi marinkellei]
Length = 393
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-----RQSVDV 66
++ I VFDG+ P +A+E R++R A+ A+ L E L +++V V
Sbjct: 83 LRPIYVFDGKP-PTLKASELQERRQR----AEEAQQLFDTAKEEGNDELMEKMSKRTVRV 137
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ + AP EA+AQ A L A V TED D L FGA ++
Sbjct: 138 SREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAWAVATEDMDALTFGAPVMLRH 197
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K P+A+F T +F +CIL GCDY I G+
Sbjct: 198 LTYS------------EAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGCDYVPKIPGI 245
Query: 176 GLKKA 180
G +KA
Sbjct: 246 GPQKA 250
>gi|195155670|ref|XP_002018724.1| GL25951 [Drosophila persimilis]
gi|194114877|gb|EDW36920.1| GL25951 [Drosophila persimilis]
Length = 1238
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+ + + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 852 RMGMSISQRMSTDCQELLRLFGIPYIVAPMEAEAQCAFLNATELTHGTITDDSDIWLFGG 911
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ +YK + N ++ E++ K + C++ G DY TGI G+G
Sbjct: 912 -RTVYKNFFAQNKHVLEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIGAV 965
Query: 179 KAKDYVFS 186
A + + S
Sbjct: 966 TAMEILAS 973
>gi|348560389|ref|XP_003465996.1| PREDICTED: flap endonuclease 1-like [Cavia porcellus]
Length = 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K R ++R + + + + E + ++ V V
Sbjct: 74 MVENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAVGAEEEVEKFTKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + G+ + AP EA+A A L AG TED D L FG+ ++
Sbjct: 134 TKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K+P+ +F T A+F +CIL G DY I+G+
Sbjct: 194 LTAS------------EAKKLPIQEFHLSRVLQALDLTQAQFVDLCILLGSDYCESIRGI 241
Query: 176 GLKKAKDYV 184
G K+A D +
Sbjct: 242 GPKRAVDLI 250
>gi|429965038|gb|ELA47035.1| hypothetical protein VCUG_01480 [Vavraia culicis 'floridensis']
Length = 335
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 12 IKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
IK + VFDG+ + ++E + R+K + K AE +D+ E + + ++ + + +
Sbjct: 76 IKPLFVFDGKPPQVKSEEIARRNERRKNAAEKYSEAEEQ-MDK-VEMEKYDKRKLKIGKE 133
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
+ A GV ++ EA+A A L G DYV TED D L F A ++ K +
Sbjct: 134 HTDEIKLLLDAMGVTYTISENEAEAFCATLCRKGIVDYVCTEDMDALCFRA-PVLLKNFV 192
Query: 130 SGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 189
+++ +K+ + F D +CIL GCDY IKG+G KA+ +
Sbjct: 193 KDTVAEYRLDEILRDMKLEFSAFMD-----LCILLGCDYAGTIKGIGPMKAETLIRR--H 245
Query: 190 PDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFL 227
+ EN ++++++ Y K + FL+ +N ++ F+
Sbjct: 246 GNIENIVKELDITDY--EYEKARETFLSMKNNVDVGFV 281
>gi|443703547|gb|ELU01026.1| hypothetical protein CAPTEDRAFT_17841 [Capitella teleta]
Length = 464
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPA--KEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSV 64
LL ++IK + VFDG +PA K+ T+E D K E L Q R +
Sbjct: 65 LLYYRIKPVFVFDG-GVPALKKQTTDE----LIDLQKVLEVENTELHNTRNQQD--RMAT 117
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+T +M + + R G+ +V+P EA+AQ A+L++ + +T+DSD+ +FG + +
Sbjct: 118 SLTEQMNIEAQELVRLFGLPYVVSPMEAEAQCAFLDLTSQTNGTVTDDSDIWLFGGRNVY 177
Query: 125 YKLDLSGNCC----FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L S F D EK T K M ++ G DY GI G
Sbjct: 178 KNLFNSKRHVEWFRFEDFEK--------QLFLTREKLVNMALVCGSDYTPGIHNAG 225
>gi|198476637|ref|XP_002132415.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
gi|198137788|gb|EDY69817.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
Length = 1236
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R + ++ +M+ + + R G+ IVAP EA+AQ A+LN IT+DSD+ +FG
Sbjct: 850 RMGMSISQRMSTDCQELLRLFGIPYIVAPMEAEAQCAFLNATELTHGTITDDSDIWLFGG 909
Query: 121 KKIIYKLDLSGNCCFMD--REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ +YK + N ++ E++ K + C++ G DY TGI G+G
Sbjct: 910 -RTVYKNFFAQNKHVLEFRAEQIEQTFNCNRGKL----IQLACLV-GSDYTTGIHGIGAV 963
Query: 179 KAKDYVFS 186
A + + S
Sbjct: 964 TAMEILAS 971
>gi|384245741|gb|EIE19234.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 384
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLI--LDRGSEA--QSHLRQ 62
+L +K + VFDG+ PA + E RR +R + A +LL + G++A + + ++
Sbjct: 75 MLEVGMKPVYVFDGKP-PALKKEELSRRVER---RGDATDLLTEAKETGADADIEKYSKR 130
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT + + R GV + AP EA+AQ A + G + +ED D L F K
Sbjct: 131 TVRVTPQHNEECRRLLRLMGVPVVEAPSEAEAQCAQMCKEGLVYGIASEDMDSLTFATPK 190
Query: 123 IIYKL--DLSGNCCF--MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+I L + N D +K+ L + +F D +CIL GCDY IKG+G
Sbjct: 191 LIRNLMKPQTQNVPINEYDYDKVLEGLNLTSDQFVD-----LCILCGCDYCGTIKGIG 243
>gi|398023565|ref|XP_003864944.1| DNA repair protein RAD2, putative [Leishmania donovani]
gi|322503180|emb|CBZ38264.1| DNA repair protein RAD2, putative [Leishmania donovani]
Length = 930
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK-LDLS 130
LNV++ GV +++P EADAQ A+L G D V TEDSD+LV GA ++ S
Sbjct: 640 LNVVELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGATTVLRGFFAQS 699
Query: 131 GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
N ++ L + T + L GCDY G+ G+GL A
Sbjct: 700 KNVVAYEQTHLSA------CGITKTVLVALASLLGCDYTEGVCGIGLVGA 743
>gi|386001444|ref|YP_005919743.1| FLAP endonuclease [Methanosaeta harundinacea 6Ac]
gi|357209500|gb|AET64120.1| FLAP endonuclease [Methanosaeta harundinacea 6Ac]
Length = 336
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 35/240 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGSEAQSHLRQSV 64
LL KV+ VFDG K T + R + R ++A E+ + G + + + +
Sbjct: 68 LLEAGAKVVFVFDGEPPRFKRETLDQRAETR----SRAEEMWQRAKEEGLDGFKYAQAAS 123
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+ +M + ++ A G+ + AP E +AQ A++ I G D V ++D D L+FGA +++
Sbjct: 124 RLEDEMIADAMRLLEAMGIPAVQAPSEGEAQAAFMAIKGDVDLVGSQDYDALLFGAPRVV 183
Query: 125 YKLDLSGNCCFMDR----EKLPSA-------LKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+ ++G + E +P L++ +A+ + MC G DY G+K
Sbjct: 184 RNMAITGKRKLPGKNVYVEVMPEVISLDEELLRLGIARRQLVEIGIMC---GTDYNEGLK 240
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
+G K AL+ I +G + ++ E + +FL PV +
Sbjct: 241 RVGPK---------------TALKLIKEHGNLEGVLEARGETIEDAAEIRDLFLDPPVTE 285
>gi|146101653|ref|XP_001469167.1| putative DNA repair protein RAD2 [Leishmania infantum JPCM5]
gi|134073536|emb|CAM72269.1| putative DNA repair protein RAD2 [Leishmania infantum JPCM5]
Length = 930
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK-LDLS 130
LNV++ GV +++P EADAQ A+L G D V TEDSD+LV GA ++ S
Sbjct: 640 LNVVELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGATTVLRGFFAQS 699
Query: 131 GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
N ++ L + T + L GCDY G+ G+GL A
Sbjct: 700 KNVVAYEQTHLSA------CGITKTVLVALASLLGCDYTEGVCGIGLVGA 743
>gi|254573770|ref|XP_002493994.1| Single-stranded DNA endonuclease, cleaves single-stranded DNA
during nucleotide excision repair [Komagataella pastoris
GS115]
gi|238033793|emb|CAY71815.1| Single-stranded DNA endonuclease, cleaves single-stranded DNA
during nucleotide excision repair [Komagataella pastoris
GS115]
gi|328354189|emb|CCA40586.1| DNA repair protein complementing XP-G cells [Komagataella pastoris
CBS 7435]
Length = 1043
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT M ++ G+ I AP EA+AQ A L D +IT+DSD +FG
Sbjct: 758 RDSDEVTQGMIDDIQDMLTRFGIPYITAPMEAEAQCAELLKLKLVDGIITDDSDCFLFGG 817
Query: 121 KKI---IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
++I ++ C F+ E++ L + T K + +L G DY GIKG+G+
Sbjct: 818 ERIYKNMFNEKQYVECYFL--EEIQRDLGL-----TRNKMIEIALLVGSDYTEGIKGIGI 870
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYV 209
A + + S DP E N+ G GS +
Sbjct: 871 VTAME-ILSEFDPQKEGNSTPKNMLGS-GSLI 900
>gi|344305257|gb|EGW35489.1| hypothetical protein SPAPADRAFT_69718 [Spathaspora passalidarum
NRRL Y-27907]
Length = 980
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + R G+ I AP EA+AQ A L G D +IT+DSD L
Sbjct: 705 QKAKRDSDEVTETMINDVQELLRRFGIPYITAPMEAEAQCAELLKIGLVDGIITDDSDCL 764
Query: 117 VFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+FG +YK + C++ ++ + + + + K + + +L G DY GIK
Sbjct: 765 LFGGDH-VYKNMFNQKQYVECYI-KDDIEAKVGLSRDKLIE-----LALLLGSDYTEGIK 817
Query: 174 GMG 176
G+G
Sbjct: 818 GIG 820
>gi|328715848|ref|XP_001946726.2| PREDICTED: hypothetical protein LOC100169397 [Acyrthosiphon pisum]
Length = 951
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 37 RDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQM 96
+D+ + +L L R S+ R + VT K+ + + G+ I AP EA+AQ
Sbjct: 635 QDTLVKRQNDLASLQRKSD-----RMASSVTQKITSEIKGLLKLFGIPYITAPMEAEAQC 689
Query: 97 AYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK----F 152
A+L G + +T+DSD+ +FGA ++YK F D +K K K
Sbjct: 690 AFLEKIGRTEGTVTDDSDVWLFGA-NVVYK-------DFFDNQKYVKQFKSIDIKQQFAL 741
Query: 153 TDAKFRYMCILSGCDYWTGIKGMG 176
+ F + L G DY GI G+G
Sbjct: 742 SRNSFIQLAFLVGSDYTNGIDGIG 765
>gi|257053576|ref|YP_003131409.1| flap endonuclease-1 [Halorhabdus utahensis DSM 12940]
gi|256692339|gb|ACV12676.1| XPG I domain protein [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAK---AAELLILDRGSEAQSHLRQSVDVTHKMA 71
+ VFDG K+ + RR++R+ ++ + A E R + +S ++ DV +
Sbjct: 78 VFVFDGAVTDLKDDEVQRRREQREQYEDQLEDAREAGDAVRVARLESRTQRLTDVILETT 137
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
++ VD AP E +AQ A++ G DYV TED D L+FGA + +L SG
Sbjct: 138 RELLALLDVPTVD---APAEGEAQAAHMARRGDVDYVGTEDYDALLFGAPFTLRQLTSSG 194
Query: 132 NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+ MD E + + + D + +L G D+ G++G G K A
Sbjct: 195 DPELMDFEATLAEHDLSWEQLVD-----VALLCGTDFNDGVRGYGPKTA 238
>gi|149237300|ref|XP_001524527.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452062|gb|EDK46318.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1129
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R S +VT M +V + + G+ I AP EA+AQ A L G D ++T+DSD
Sbjct: 854 QKAKRDSDEVTETMIYDVQELLKRFGIPFITAPMEAEAQCAELLKIGLVDGIVTDDSDCF 913
Query: 117 VFGAKKI---IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 173
+FG K+ ++ C F D A K+ L++ + +L G DY GIK
Sbjct: 914 LFGGDKVYKNMFNQKQFVECYFKD----DIATKIGLSQ---DNLIELALLLGSDYTEGIK 966
Query: 174 GMG 176
G+G
Sbjct: 967 GVG 969
>gi|154339662|ref|XP_001565788.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|317374905|sp|A4HFE4.1|FEN1_LEIBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134063106|emb|CAM45304.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 395
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 33/190 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKK-----RDSHKAK-AAELLILDRGSEAQSHL 60
++ IK I VFDG+ K E RR+K R+ KAK A + ++++ S
Sbjct: 78 MIDEGIKPIYVFDGKPPKLKADELETRRQKAAEAEREFEKAKDAGDDEMMEKMS------ 131
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++V V+ + + + GV I AP EA+AQ A L G A V TED D L FG+
Sbjct: 132 KRTVRVSREQIEESKKLLQLMGVPVIQAPSEAEAQCAELVKKGKAWAVGTEDMDALTFGS 191
Query: 121 KKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCILSGCDYWT 170
++ L++S D +K P A + + +F D +CIL GCDY
Sbjct: 192 TVMLRHLNIS------DAKKRPIAEIHLDEVLQATGLSMDQFVD-----LCILLGCDYVP 240
Query: 171 GIKGMGLKKA 180
+ G+G ++A
Sbjct: 241 KVPGIGPQRA 250
>gi|348500556|ref|XP_003437839.1| PREDICTED: probable flap endonuclease 1 homolog [Oreochromis
niloticus]
Length = 348
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L H IK + VFDG+ K+A E R A+ A + A S ++
Sbjct: 62 FLEHGIKPVFVFDGKPPGEKKAVLEKR--------AQTAGRNYSNWTGTASSQTKE---- 109
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+Q + GV I AP +A+A A L G V +ED D L FGA +I +
Sbjct: 110 -------CLQLLKCLGVPVIQAPGDAEALCAQLVREGTVHAVASEDMDTLPFGANILIRQ 162
Query: 127 LDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L+ + ++ KL L++ +F D +CIL GCDY I G+G K+A
Sbjct: 163 LNAKKDSEVIEYSLPKLLEKLQIGHKEFVD-----LCILLGCDYCEKIPGLGPKRA 213
>gi|401429746|ref|XP_003879355.1| putative DNA repair protein RAD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495605|emb|CBZ30910.1| putative DNA repair protein RAD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 930
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK-LDLS 130
LNV++ GV +++P EADAQ A+L G D V TEDSD+LV GA ++ S
Sbjct: 640 LNVVELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGATTVLRGFFAQS 699
Query: 131 GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
N ++ L + T + L GCDY G+ G+GL A
Sbjct: 700 KNVVAYEQTHLSA------CGITKTVLVALASLLGCDYTEGVCGIGLVGA 743
>gi|307102466|gb|EFN50740.1| hypothetical protein CHLNCDRAFT_37697 [Chlorella variabilis]
Length = 389
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 26/191 (13%)
Query: 2 KYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLR 61
+ + ML A +K + VF+G+ K R +R+ + + + + +
Sbjct: 71 RTVRMLEAG-MKPVFVFEGKAPELKREELAKRSNRREDANTELEAAKEAGNAEDVEKYSK 129
Query: 62 QSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAK 121
++V VT + + R GV + AP EA+AQ A L G + TED D L FG
Sbjct: 130 RTVRVTREHNEECKRLLRLMGVPVLEAPSEAEAQCAQLCKDGLVYGISTEDMDSLTFGTP 189
Query: 122 KIIYKLDLSGNCCFMDREKLPSALKMPLA------------KFTDAKFRYMCILSGCDYW 169
K+I L PS+ K PLA + T+ +F +CIL GCDY
Sbjct: 190 KLIRHL------------MAPSSQK-PLAMEFDHELVLKELELTEDQFIDLCILCGCDYT 236
Query: 170 TGIKGMGLKKA 180
I G+G +A
Sbjct: 237 AKISGIGAVRA 247
>gi|260798636|ref|XP_002594306.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
gi|317374877|sp|C3ZBT0.1|FEN1_BRAFL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229279539|gb|EEN50317.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
Length = 380
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K R ++R+ + + + ++ V V
Sbjct: 74 MVDNGIKPVYVFDGKPPNMKSGELAKRAERREEAQKALEKAEEAGEAEDVNKFQKRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + G+ + AP EA+AQ A L G TED D+L FG ++
Sbjct: 134 TKEHNAECKKLLTLMGIPYVDAPCEAEAQCAELAKKGKVYAAGTEDMDVLTFGTNIMLRH 193
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A KMP+ ++ T +F +CIL GCDY I+G+
Sbjct: 194 LTFS------------EARKMPIKEYYYDRLLAELDLTQDQFIDLCILLGCDYCDSIRGI 241
Query: 176 GLKKA 180
G K+A
Sbjct: 242 GPKRA 246
>gi|354547816|emb|CCE44551.1| hypothetical protein CPAR2_403540 [Candida parapsilosis]
Length = 994
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R S +VT M +V + + G+ I AP EA+AQ A L G D +IT+DSD +FG
Sbjct: 723 RDSDEVTENMIGDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGIITDDSDCFLFGG 782
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKFRYMCILSGCDYWTGIKGMG 176
+ IYK F ++ + LK + + + IL G DY GIKG+G
Sbjct: 783 DR-IYK------NMFSQKQFVECYLKNDIEDKIGLSRENLIELAILLGSDYTEGIKGIG 834
>gi|318055766|ref|NP_001187811.1| flap endonuclease 1-b [Ictalurus punctatus]
gi|308324033|gb|ADO29152.1| flap endonuclease 1-b [Ictalurus punctatus]
Length = 380
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL----RQ 62
+L IK + VFDG+ P ++ E ++R +R +A+A +LL + Q ++ ++
Sbjct: 74 MLDSGIKPVYVFDGKP-PQLKSGELEKRGER---RAEAEKLLAQAQEMGEQENIDKFSKR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + GV I AP EA+A A L AG A TED D L FG
Sbjct: 130 LVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKAYATATEDMDGLTFGTSV 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
++ L S +E S + ++ + +F +CIL GCDY IKG+G K+A D
Sbjct: 190 LLRHLTASEAKKLSIQEFHFSRVLQEMS-LSHQQFIDLCILLGCDYCGTIKGIGPKRAID 248
Query: 183 YV 184
+
Sbjct: 249 LI 250
>gi|414865352|tpg|DAA43909.1| TPA: hypothetical protein ZEAMMB73_723390 [Zea mays]
Length = 1531
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ I+AP EA+AQ AY+ I D V+T+DSD+ +FGA+ + + F DR+ +
Sbjct: 928 GLPYIIAPMEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYV 980
Query: 142 PSALKMPLAK---FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ + + + M +L G DY G+ G+G+ A + V + + D
Sbjct: 981 ETYFMKDIESELGLSREQLIRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEED 1033
>gi|402466077|gb|EJW01645.1| hypothetical protein EDEG_03812 [Edhazardia aedis USNM 41457]
Length = 856
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 67 THKMAL---NVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
TH++ + +I + + + AP EAD+Q AY ++ D VITED+D+ +FG KKI
Sbjct: 634 THELNILKNTIIDILKIFNLPFVEAPLEADSQCAYFSLKNIVDAVITEDNDIFLFGGKKI 693
Query: 124 IYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 182
+G N D ++ + + + + ++ G DY GIKG GLKK+ D
Sbjct: 694 YRNYFKNGKNIDLYDINEIKKII-------SRDEMIMISLILGSDYCDGIKGFGLKKSLD 746
Query: 183 YV 184
+
Sbjct: 747 LI 748
>gi|390371157|dbj|GAB65038.1| DNA repair endonuclease [Plasmodium cynomolgi strain B]
Length = 1505
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 82 GVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 141
G+ + +P EA+AQ +YLN Y D +I++DSD+LVF K +I F +R+K
Sbjct: 1180 GIPYVQSPCEAEAQCSYLNCKNYCDAIISDDSDVLVFNGKTVIKN--------FFNRKKT 1231
Query: 142 PSA-----LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
++ L + D + + +L GCDY G+ G+G+ A
Sbjct: 1232 VEVYERKHIEDKLGLYQD-ELINLSLLCGCDYTIGVHGVGIVNA 1274
>gi|47230549|emb|CAF99742.1| unnamed protein product [Tetraodon nigroviridis]
Length = 866
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
Q R + VT +M L + R GV ++AP EA+AQ A L+ A + IT+DSD+
Sbjct: 660 QQQERMASTVTGQMYLESQELLRLFGVPFLIAPMEAEAQCAALDRADHTHGTITDDSDVW 719
Query: 117 VFGAKKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 174
+FG + +YK S N + L +AL + K + + L G DY G+ G
Sbjct: 720 LFGGRH-VYKNFFSQNKYVEYFQYSDLQNALGLDRTKLIN-----LAYLLGSDYTEGVAG 773
Query: 175 MGLKKAKDYVFSIMDPDFE 193
+G + + P E
Sbjct: 774 VGYVTGMEVLNEFTGPGLE 792
>gi|449019441|dbj|BAM82843.1| probable excision repair protein ERCC5 [Cyanidioschyzon merolae
strain 10D]
Length = 1117
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 25 AKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMALNVIQACRARGVD 84
A +ATE R++ + A+ E+ + SE + R + VT +M + + + G+
Sbjct: 725 ADDATE---RQRMEPMFAEHEEMDLAKLRSEYAAAARHADSVTEQMFADTKRLLQLLGIP 781
Query: 85 CIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 144
I A EA+AQ A+L+ AG D V+TEDSD +FGA + +Y+ + + E
Sbjct: 782 YIEAAMEAEAQCAFLDRAGIVDAVVTEDSDAFLFGASR-VYRHIFEDSKYVEEYEMNRIE 840
Query: 145 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSI-MDPD 191
M L++ K + +L G DY G+ G+G+ A + V + DPD
Sbjct: 841 RNMGLSR---DKLICLGLLLGSDYSDGVYGVGIVNATEIVEAFCRDPD 885
>gi|385302733|gb|EIF46850.1| structure-specific endonuclease rad27 [Dekkera bruxellensis
AWRI1499]
Length = 305
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK VFDG+ K E R K+R + KA + E Q R++V V
Sbjct: 1 MVGYGIKPCYVFDGKPPVMKGGELEKRLKRRQDAEEKAXKAXEAGEAQELQKFQRRTVRV 60
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + R G+ + AP EA++Q A L AG +ED D L + ++
Sbjct: 61 TREQNEEAKHLLRLMGIPYVEAPCEAESQCAELAKAGNVYGAASEDMDTLCYQPTVLLRN 120
Query: 127 LDLSGNCCF-MDREKLPSALK---MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
+ + + +D+ + LK M + +F D MCIL GCDY I+G+G
Sbjct: 121 VTAAESRKLKIDQYDIKEVLKGFDMTIEEFVD-----MCILLGCDYCETIRGVG 169
>gi|76364187|sp|Q4JAN1.2|FEN_SULAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 349
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQSVDVTHKMAL 72
I VFDG+ P ++ +EE R+KR +A+ G E + + + +V ++++M
Sbjct: 76 IFVFDGK--PPEKKSEEIERRKRAKEEAEKKLEKAKLEGEYREIRKYAQAAVRLSNEMVE 133
Query: 73 NVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN 132
+ A G+ + AP E +A+ AY+N + ++D D L+FGAK+++ + +SG
Sbjct: 134 ESKKLLDAMGIPVVQAPGEGEAEAAYINSIDLSWAAASQDYDSLLFGAKRLVRNITISGK 193
Query: 133 CC-------------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLK 178
++ E L L + + D + IL G DY G+KG+G+K
Sbjct: 194 RKLPNKDVYVEIKPELIELESLLKKLGINREQLID-----IAILIGTDYNPDGVKGIGVK 248
Query: 179 KA 180
A
Sbjct: 249 TA 250
>gi|345005776|ref|YP_004808629.1| Flap structure-specific endonuclease [halophilic archaeon DL31]
gi|344321402|gb|AEN06256.1| Flap structure-specific endonuclease [halophilic archaeon DL31]
Length = 326
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKR---DSHKAKAAELLILDRGSEAQSHLRQSVDVTHKMA 71
++VFDG K E RR++R + K +A E + ++ ++ D H+
Sbjct: 78 VLVFDGGVTDLKSDEVERRREQRKKAEERKQEAEEAGDSVEAARLEARTQRLTDTIHETT 137
Query: 72 LNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 131
++ V I AP E +AQ A++ G DY +ED D + FGA + + +L G
Sbjct: 138 RGLLDRL---DVPYIEAPAEGEAQCAHMAATGEVDYAGSEDYDTMTFGAPRTLRQLTSKG 194
Query: 132 NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 191
+ MD +K + + D + +L G D+ G+ G G K
Sbjct: 195 HPELMDLQKTLEKHDISYEQLVD-----VALLMGTDFNEGVTGYGPK------------- 236
Query: 192 FENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
A++ + +G I ++ ++ + +F PV D
Sbjct: 237 --TAVKAVKEHGDIWGVMEAEDVYVANADRVRELFFDPPVTD 276
>gi|70606571|ref|YP_255441.1| flap endonuclease-1 [Sulfolobus acidocaldarius DSM 639]
gi|449066790|ref|YP_007433872.1| flap endonuclease-1 [Sulfolobus acidocaldarius N8]
gi|449069063|ref|YP_007436144.1| flap endonuclease-1 [Sulfolobus acidocaldarius Ron12/I]
gi|68567219|gb|AAY80148.1| XPG/RAD25 related endonuclease [Sulfolobus acidocaldarius DSM 639]
gi|449035298|gb|AGE70724.1| flap endonuclease-1 [Sulfolobus acidocaldarius N8]
gi|449037571|gb|AGE72996.1| flap endonuclease-1 [Sulfolobus acidocaldarius Ron12/I]
Length = 331
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 15 IMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS--EAQSHLRQSVDVTHKMAL 72
I VFDG+ P ++ +EE R+KR +A+ G E + + + +V ++++M
Sbjct: 58 IFVFDGK--PPEKKSEEIERRKRAKEEAEKKLEKAKLEGEYREIRKYAQAAVRLSNEMVE 115
Query: 73 NVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN 132
+ A G+ + AP E +A+ AY+N + ++D D L+FGAK+++ + +SG
Sbjct: 116 ESKKLLDAMGIPVVQAPGEGEAEAAYINSIDLSWAAASQDYDSLLFGAKRLVRNITISGK 175
Query: 133 CC-------------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMGLK 178
++ E L L + + D + IL G DY G+KG+G+K
Sbjct: 176 RKLPNKDVYVEIKPELIELESLLKKLGINREQLID-----IAILIGTDYNPDGVKGIGVK 230
Query: 179 KA 180
A
Sbjct: 231 TA 232
>gi|312375261|gb|EFR22667.1| hypothetical protein AND_14372 [Anopheles darlingi]
Length = 738
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 73 NVIQACR----ARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLD 128
+V++ C A G+ C+ AP EA+A AYLN D VI++DSD +GA ++
Sbjct: 122 HVLKQCEELLSAMGLVCVQAPGEAEALCAYLNRDALIDGVISQDSDCFAYGAVRVFRNFC 181
Query: 129 LSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMG 176
S N +D L A L + K M +LSGCDY G+ G+G
Sbjct: 182 ASQNGGSVDVYDLERANSAGL-RLGQEKIVAMALLSGCDYCPAGVAGVG 229
>gi|320101275|ref|YP_004176867.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
gi|319753627|gb|ADV65385.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
Length = 356
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 94/223 (42%), Gaps = 41/223 (18%)
Query: 12 IKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDVTHK 69
IK + VFDG+ L AKE E RR R+ K E + A+ + S +T +
Sbjct: 77 IKPVYVFDGKPPELKAKEI--ERRRVVREEAARKYEEAVQAGDLESARRYAMMSARLTDE 134
Query: 70 MALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDL 129
M + A G+ + AP E +AQ AY+ G A ++D D L+FG+ +++ L +
Sbjct: 135 MVRDAKALLDAMGIPWVQAPAEGEAQAAYMARKGDAYASASQDYDSLLFGSPRLVRNLTI 194
Query: 130 SGNCCFMDRE-------------KLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGM 175
SG RE KL S L + D + IL G DY G +G+
Sbjct: 195 SGRRKLPRREEYVEVKPEVIELDKLLSKLGVTYENLVD-----IGILLGTDYNPDGFEGI 249
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 218
G KK AL+ + VY GS KI K L S
Sbjct: 250 GPKK---------------ALQLVKVY---GSVEKIPKPLLKS 274
>gi|156082429|ref|XP_001608699.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis T2Bo]
gi|317374876|sp|A7AX58.1|FEN1_BABBO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154795948|gb|EDO05131.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis]
Length = 672
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 24/243 (9%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL I+ + VFD AK T R+ R+ ++ + + D + ++ ++V +
Sbjct: 76 LLELGIRPVFVFDSTPPEAKSQTLAKRKLLREEAESSLEKAIEEDDKEAIRKYVGRTVRI 135
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K + + R GV I A EA+AQ AYL G+ V +ED+D LVF ++
Sbjct: 136 TQKENESAKKLLRLVGVPVIEAAEEAEAQCAYLCQRGFVTAVGSEDADALVFRCGVLLKN 195
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 186
L S ++ A + L + T +F CIL GCDY +KG+G K A +
Sbjct: 196 LTASNKPVV----RVDLAKALELLELTHEQFTDFCILCGCDYCGTLKGVGPKTAYNL--- 248
Query: 187 IMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVVPLNPLE 246
I +G I +++ E L + F DP +++ ++ E
Sbjct: 249 ------------IKKHGSISRILEVRSETLEGYEAAQEYF-----RDPKVRDITTIDRCE 291
Query: 247 SEM 249
+ +
Sbjct: 292 ANI 294
>gi|390938891|ref|YP_006402629.1| flap endonuclease 1 [Desulfurococcus fermentans DSM 16532]
gi|390191998|gb|AFL67054.1| flap endonuclease 1 [Desulfurococcus fermentans DSM 16532]
Length = 363
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSE-AQSHLRQSVDVTHKM 70
IK + VFDG+ P +A E +RRK AK E + E A+ + S +T +M
Sbjct: 87 IKPVYVFDGKP-PELKAREIERRKAVKEEAAKKYEEAVQSGDLELARRYAMMSAKLTEEM 145
Query: 71 ALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYKLDLS 130
+ A G+ + AP E +AQ AY+ G A ++D D L+FG+ K++ L +S
Sbjct: 146 VRDAKSLLDAMGIPWVQAPAEGEAQAAYIVKKGDAYASASQDYDSLLFGSPKLVRNLTIS 205
Query: 131 GNCC-------------FMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW-TGIKGMG 176
G ++ +KL L + L D + IL G DY G +G+G
Sbjct: 206 GRRKLPRKNEYVEVKPELIELDKLLVQLGITLENLID-----IGILLGTDYNPDGFEGIG 260
Query: 177 LKKA 180
KKA
Sbjct: 261 PKKA 264
>gi|71652611|ref|XP_814958.1| flap endonuclease-1 (FEN-1) [Trypanosoma cruzi strain CL Brener]
gi|122023721|sp|Q4DKQ5.1|FEN1_TRYCC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|70879977|gb|EAN93107.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma cruzi]
Length = 393
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 12 IKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL-----RQSVDV 66
++ I VFDG+ P +A+E R++R A+ A+ L E L +++V V
Sbjct: 83 LRPIYVFDGKP-PTLKASELQERRQR----AEEAQQLFDTAKEEGNDELMEKMSKRTVRV 137
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ + AP EA+AQ A L A V TED D L FGA ++
Sbjct: 138 SREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKKKAWAVATEDMDALTFGAPVMLRH 197
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A K P+A+F T +F +CIL GCDY I G+
Sbjct: 198 LTYS------------EAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGCDYVPKIPGI 245
Query: 176 GLKKA 180
G +KA
Sbjct: 246 GPQKA 250
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,157,570,600
Number of Sequences: 23463169
Number of extensions: 212953595
Number of successful extensions: 539946
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 535889
Number of HSP's gapped (non-prelim): 2456
length of query: 336
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 193
effective length of database: 9,003,962,200
effective search space: 1737764704600
effective search space used: 1737764704600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)