BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11827
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24558|EXO1_DROME Exonuclease 1 OS=Drosophila melanogaster GN=tos PE=1 SV=1
Length = 732
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 197/314 (62%), Gaps = 9/314 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+KY++MLL++ IK I+VFDG+HLPAK TE+ RR R K +AAELL L R EA+SH+
Sbjct: 60 LKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHM 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ VDVTH MAL +I+ CR+R VDCIVAP+EADAQMA+LN A A Y+ITEDSDL +FGA
Sbjct: 120 RRCVDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGA 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
K II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+GL KA
Sbjct: 180 KNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
++ D AL+KI Y + + +++ +++ +F F + +Y+P+ + +
Sbjct: 240 CKFILKTEQEDMRIALKKIPSYLNMRN-LEVDDDYIENFMKAEATFRHMFIYNPLERRMQ 298
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVT- 299
L LE DE + + LE +QA LALGNL+PFS++ +D W P+ P
Sbjct: 299 RLCALEDYETDERYCSNAGTLLE-DSEQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNV 357
Query: 300 ------SIWSKQYE 307
SIW ++
Sbjct: 358 KRSKHKSIWQTNFQ 371
>sp|Q803U7|EXO1_DANRE Exonuclease 1 OS=Danio rerio GN=exo1 PE=2 SV=1
Length = 806
Score = 250 bits (638), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 201/347 (57%), Gaps = 35/347 (10%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK++ MLL+ +K I+VFDGR+LP+K+ E+ RR++R ++ K +LL + +EA+
Sbjct: 60 MKFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQANLQKGKQLLREGKITEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++T MA +VI+A R RGVDC+VAP+EADAQ+A+LN + A VITEDSDLL FG
Sbjct: 120 TRSVNITPSMAHDVIRAARTRGVDCVVAPYEADAQLAFLNKSDIAQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNC-----CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 175
KK+I K+D GN C + R K + FT+ KFRYMCILSGCDY + G+
Sbjct: 180 KKVILKMDKQGNGLEIEQCHLGRCKSLGNI------FTEEKFRYMCILSGCDYLQSLYGI 233
Query: 176 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPV 235
GL KA + +PD ++K+ Y K+ + + +E++ F N FLYQ V+DP+
Sbjct: 234 GLGKACKLLRMANNPDILKVIKKMGQYLKMD--ISVPEEYIEGFTKANNTFLYQLVFDPL 291
Query: 236 SKEVVPLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEEN 295
++VVPLNP + + LS + ++ Q+ALGNLD +++ +D +NPD+ +
Sbjct: 292 RRKVVPLNPYPDHINP---AALSYAGTNVGDEKGLQMALGNLDINTMQRIDDFNPDAPQT 348
Query: 296 LP-------------------VTSIWSKQYEKPCDRHSSEESVSEPP 323
P SIWS+ YE C + S S PP
Sbjct: 349 QPPKAPRSSSWNDRCDKTATTQASIWSQNYEPGCTKSQSPTSPKRPP 395
>sp|Q9UQ84|EXO1_HUMAN Exonuclease 1 OS=Homo sapiens GN=EXO1 PE=1 SV=2
Length = 846
Score = 235 bits (599), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 22/322 (6%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL+H IK I+VFDG LP+K+ E RR++R ++ K +LL + SEA+
Sbjct: 60 MKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A R++GVDC+VAP+EADAQ+AYLN AG +ITEDSDLL FG
Sbjct: 120 TRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y K+ + + ++++ F N FLYQ V+DP+ ++++
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYINGFIRANNTFLYQLVFDPIKRKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDS-------- 292
PLN E ++ E LS + A Q+ALGN D + E++D +NPD+
Sbjct: 297 PLNAYEDDVDPET---LSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRS 353
Query: 293 --------EENLPVTSIWSKQY 306
+++ V+SIW + Y
Sbjct: 354 HSWDDKTCQKSANVSSIWHRNY 375
>sp|Q9W6K2|EXO1_XENLA Exonuclease 1 OS=Xenopus laevis GN=exo1 PE=2 SV=1
Length = 734
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK +HMLL+ +K I+VFDG LP+K+ E+ RR+KR ++ K +LL + +EA+
Sbjct: 60 MKLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQTNLQKGKQLLREGKLAEARECF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+SV++T MA VI+A R+ GVD IVAP+EAD+Q+AYLN +A+ +ITEDSDLL FG
Sbjct: 120 SRSVNITSSMAHEVIKAARSEGVDYIVAPYEADSQLAYLNKNDFAEAIITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK++ K+D GN +D+ + + FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 180 KKVLLKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y + + + + + ++ F N FLYQ V+DPV ++++
Sbjct: 239 CKLLKVANNPDITKVIQKIGQY--LKTNITVPEGYIEGFLRANNTFLYQLVFDPVERKLI 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPD 291
PLNP +++ E +L+ + A Q+ALGN+D + +++D +NPD
Sbjct: 297 PLNPYGNDVNPE---ELNYAGPNMGDSVALQIALGNMDINTRKQIDDYNPD 344
>sp|Q9QZ11|EXO1_MOUSE Exonuclease 1 OS=Mus musculus GN=Exo1 PE=2 SV=2
Length = 837
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 193/310 (62%), Gaps = 7/310 (2%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
MK+++MLL++ +K I++FDG LP+K+ E RR++R S+ K +LL + SEA+
Sbjct: 60 MKFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQSNLLKGKQLLREGKVSEARDCF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+S+++TH MA VI+A RA GVDC+VAP+EADAQ+AYLN AG VITEDSDLL FG
Sbjct: 120 ARSINITHAMAHKVIKAARALGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
KK+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 180 KKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKA 238
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ +PD ++KI Y ++ + + ++++T F N FLYQ V+DP+ +++V
Sbjct: 239 CKVLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYITGFIRANNTFLYQLVFDPIQRKLV 296
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLEEMDQWNPDSEENLPVTS 300
PLN ++ E L+ + A Q+ALGN D + E++D ++PD+ +
Sbjct: 297 PLNAYGDDVNPET---LTYAGQYVGDSVALQIALGNRDVNTFEQIDDYSPDTMPAHSRSH 353
Query: 301 IWS-KQYEKP 309
W+ K +KP
Sbjct: 354 SWNEKAGQKP 363
>sp|Q8L6Z7|EXO1_ARATH Exonuclease 1 OS=Arabidopsis thaliana GN=EXO1 PE=2 SV=2
Length = 735
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 11/281 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M +++L H +K IMVFDG LP K E R + R + A+A E S A
Sbjct: 60 MHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSRKENLARALEHEANGNSSAAYECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++VD++ +A +IQ R VD +VAP+EADAQMA+L I D +ITEDSDL+ FG
Sbjct: 120 SKAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAIITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 180 LRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ ++ ++ + S V + + SF L F +Q VYDP +++++
Sbjct: 240 HALITKFK--SYDRVIKHLKY-----STVSVPPLYEESFKRALLTFKHQRVYDPNAEDII 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFS 281
L ++ D + +P+D A +ALG LDPF+
Sbjct: 293 HL----CDISDNLGEDSDFVGPSMPQDIAKGIALGQLDPFT 329
>sp|P53695|EXO1_SCHPO Exodeoxyribonuclease 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=exo1 PE=1 SV=1
Length = 571
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 146/257 (56%), Gaps = 19/257 (7%)
Query: 1 MKY-IH---MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA 56
+KY IH ML + +K ++VFDG LP K +TE+ R+++R +L + S+A
Sbjct: 56 LKYAIHQALMLQYYGVKPLIVFDGGPLPCKASTEQKRKERRQEAFELGKKLWDEGKKSQA 115
Query: 57 QSHLRQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLL 116
+ VDVT +MA +I A R G++ IVAP+EADAQ+ YL D +ITEDSD+L
Sbjct: 116 IMQFSRCVDVTPEMAWKLIIALREHGIESIVAPYEADAQLVYLEKENIIDGIITEDSDML 175
Query: 117 VFGAKKIIYKLDLSGNCCFMDREKLPSA----LKMPLAKFTDAKFRYMCILSGCDYWTGI 172
VFGA+ +++K+D GNC + R + +A L++P+ K R+M I SGCDY G+
Sbjct: 176 VFGAQTVLFKMDGFGNCITIRRNDIANAQDLNLRLPI-----EKLRHMAIFSGCDYTDGV 230
Query: 173 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVY 232
GMGLK A Y+ +P A+R + ++ +K+ F F +L F +Q VY
Sbjct: 231 AGMGLKTALRYLQKYPEP--RAAIRAM----RLDKSLKVPVSFEKEFALADLAFRHQRVY 284
Query: 233 DPVSKEVVPLNPLESEM 249
P K +V L+P E E+
Sbjct: 285 CPKDKTLVHLSPPEREL 301
>sp|Q54ED2|EXO1_DICDI Exonuclease 1 OS=Dictyostelium discoideum GN=exo1 PE=3 SV=1
Length = 1046
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 141/249 (56%), Gaps = 19/249 (7%)
Query: 4 IHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS 63
I ML+++K+ +++FDG LP K+ E++R + R+ +K KA L+ S+A +++
Sbjct: 63 IKMLISYKVIPVVIFDGGPLPNKKLKEQERLRHREEYKNKAKAYLLEGNKSQANICFQKA 122
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
VD+T +MA +I+ RA V+ +VAP+EADAQ+ YL+I G D +ITEDSDL+ FGA I
Sbjct: 123 VDITPRMAFLLIKELRALKVEYLVAPYEADAQLTYLSITGQVDAIITEDSDLVAFGATHI 182
Query: 124 IYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 181
I+K+D G + E L S K F R MCILSGCDY + GMGLK +
Sbjct: 183 IFKMDKYGYAQEIKTEDLGSCKKDGYDFIDFNQTMLRQMCILSGCDYLPSLSGMGLKTS- 241
Query: 182 DYVFSIMDPDFENALRKINVYGKIGSYVK-----ITKEFLTSFHNTNLMFLYQPVYDPVS 236
F + L++ K+ Y+K ++E+ F+ + F +Q V+DPVS
Sbjct: 242 ---FKL--------LKQHRDIEKVFKYLKREKSNFSQEYEQQFYKADFTFKHQRVFDPVS 290
Query: 237 KEVVPLNPL 245
+ + L PL
Sbjct: 291 RILTTLLPL 299
>sp|Q60GC1|EXO1_ORYSJ Exonuclease 1 OS=Oryza sativa subsp. japonica GN=EXO1 PE=2 SV=1
Length = 836
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 147/283 (51%), Gaps = 11/283 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M ++ML H +K I+VFDG HLP K E R + R + +A E A
Sbjct: 60 MHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECY 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+++VD+T ++A +IQ + VD IVAP+EADAQM +L++ D VITEDSDL+ FG
Sbjct: 120 QKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
+II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 239
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKEVV 240
+ + E ++ + S V + ++ +F F +Q VYDPV++++V
Sbjct: 240 HALIQKLK--GHEKVIKHLRY-----SAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIV 292
Query: 241 PLNPLESEMRDEVFSQLSLKELELPKDQAFQLALGNLDPFSLE 283
L+ + ++ L LP+ A +A GN+DP + E
Sbjct: 293 HLSGIPHGSSED----LDFLGPWLPQTVAKGIAQGNIDPITKE 331
>sp|P39875|EXO1_YEAST Exodeoxyribonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=EXO1 PE=1 SV=2
Length = 702
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K +L K++ +VFDG +P K++TE RR KR +KA A L A +
Sbjct: 60 IKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKENKAIAERLWACGEKKNAMDYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++ VD+T +MA +I C+ G+ IVAPFEAD+QM YL +I+EDSDLLVFG
Sbjct: 120 QKCVDITPEMAKCIICYCKLNGIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 177
+++I KL+ G C + R+ KLP K PL T+ + M LSGCDY GI +GL
Sbjct: 180 RRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
Query: 178 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSK 237
A V N + +I + + + I ++ + L F +Q V+ P+ K
Sbjct: 238 ITAMKLVRRF------NTIERIILSIQREGKLMIPDTYINEYEAAVLAFQFQRVFCPIRK 291
Query: 238 EVVPLNPLESEMRD 251
++V LN + ++D
Sbjct: 292 KIVSLNEIPLYLKD 305
>sp|Q12086|DIN7_YEAST DNA damage-inducible protein DIN7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DIN7 PE=2 SV=1
Length = 430
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 130/247 (52%), Gaps = 9/247 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
+K + +L KIK +VFDG L K TE RRKKR ++ A +L A +
Sbjct: 60 IKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKKRLENEMIAKKLWSAGNRYNAMEYF 119
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SVD+T +MA +I C+ + IVAPFEAD QM YL G +I+EDSDLLVFG
Sbjct: 120 QKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGC 179
Query: 121 KKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
K +I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +GI +G+
Sbjct: 180 KTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 238
Query: 179 KAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYDPVSKE 238
A V + ++ L +I K+ +K F N F YQ V+ P+S +
Sbjct: 239 TAMKIVKRY--SEMKDILIQIERTEKLC----FSKAFKQQVEFANYAFQYQRVFCPLSNQ 292
Query: 239 VVPLNPL 245
+ LN +
Sbjct: 293 ITTLNNI 299
>sp|Q4UFP0|FEN1_THEAN Flap endonuclease 1 OS=Theileria annulata GN=FEN1 PE=3 SV=1
Length = 506
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M LL + IK + VFD + K T + RR+KR+ K + + A+ +
Sbjct: 70 MNRCSKLLEYGIKPVFVFDSKPPELKSKTLDKRRQKREEAKTDFKKAISEGDKESAKKLV 129
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++V VT M + + R G+ I A EA+AQ AYL +V +ED+D LVFG
Sbjct: 130 GRTVKVTKDMNDSAKKLLRLMGIPVIEALEEAEAQCAYLVTKNLCHFVASEDTDTLVFGG 189
Query: 121 KKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
++ + S N +D +K+ L+ +F D CIL GCDY ++G+G K
Sbjct: 190 WFLLRNVTSSANKKIVKVDLQKVLDGLEFNFDQFVD-----FCILCGCDYCDTLEGVGPK 244
Query: 179 KA 180
A
Sbjct: 245 TA 246
>sp|D3TQJ5|FEN1_GLOMM Flap endonuclease 1 OS=Glossina morsitans morsitans GN=Fen1 PE=2
SV=1
Length = 382
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQSV 64
LL + IK + VFDG+ P ++ E +R +R KA E + G+EA R+ V
Sbjct: 74 LLENGIKPVYVFDGKP-PISKSGELAKRAERREDAQKALEKAT-EAGNEADMDKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + A + + GV + AP EA+AQ A L AG TED D L FG+ ++
Sbjct: 132 KVTKEHANEAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMDALTFGSGILL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIK 173
L S A KMP+ +F+ AK F +CIL GCDY GI+
Sbjct: 192 RHLTFS------------EARKMPVKEFSYAKVLDGFGLTSQEFIDLCILLGCDYCDGIR 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSFHNTNLMFLYQPVYD 233
G+G K+A + + S D E L KI+ K T ++ +F+ V D
Sbjct: 240 GIGPKRATELMNSY--KDIETILEKID-------RKKYTVPEDWNYQIARELFVNPEVAD 290
Query: 234 PVSKEVVPLNPLE 246
P S E+ +P E
Sbjct: 291 PSSLELKWFDPDE 303
>sp|C6TEX6|FEN1_SOYBN Flap endonuclease 1 OS=Glycine max GN=FEN1 PE=2 SV=1
Length = 382
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR +E L + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETANKEDIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+AQ A L AG V++ED D L FGA K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYGVVSEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSKKIPVMEFEVAKILEELNMTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 G 176
G
Sbjct: 243 G 243
>sp|B4MR84|FEN1_DROWI Flap endonuclease 1 OS=Drosophila willistoni GN=Fen1 PE=3 SV=1
Length = 388
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA + G EA+ R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TEAGDEAEIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSSK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTG 171
++ L S A KMP+ +FT K F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFTYEKLLQGLELNQREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + S D
Sbjct: 238 IKGIGPKRAIELINSYRD 255
>sp|B4KNM1|FEN1_DROMO Flap endonuclease 1 OS=Drosophila mojavensis GN=Fen1 PE=3 SV=1
Length = 388
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQSV 64
LL + IK + VFDG+ P +A E +R +R KA ++ D G EA+ R+ V
Sbjct: 74 LLDNGIKPVYVFDGKP-PDLKAGELAKRAERREEAEKALKVAT-DAGDEAEIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + + + + GV + AP EA+AQ A L AG TED D L FG+ K++
Sbjct: 132 RVTKEHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSCKLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIK 173
L S A KMP+ +F T +F +CIL GCDY IK
Sbjct: 192 RYLTYS------------EARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCDSIK 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINV 201
G+G K+A + + + D E L I+
Sbjct: 240 GIGPKRAIELIKTYR--DIETILENIDT 265
>sp|Q4N3S6|FEN1_THEPA Flap endonuclease 1 OS=Theileria parva GN=FEN1 PE=3 SV=1
Length = 494
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 1 MKYIHMLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHL 60
M L + IK + VFD + K T E RR++R+ A + + + +
Sbjct: 70 MNRCSKFLEYGIKPVFVFDSKPPELKTKTLEKRRQQREEANASLKKAISEGDKESVKKLV 129
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++V V+ +M + + R GV I A EA+AQ AYL +V +ED+D LVFG
Sbjct: 130 GRTVKVSKEMNESAKKLLRLMGVPVIEALEEAEAQCAYLVTKNLCRFVASEDTDTLVFGG 189
Query: 121 KKIIYKLDLSGNCCFM--DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
++ + S + + D +K+ L+ +F D CIL GCDY ++G+G K
Sbjct: 190 AFLLRNVASSSSKKILKVDLQKVLDGLEFNFDQFID-----FCILCGCDYCDTLEGVGPK 244
Query: 179 KA 180
A
Sbjct: 245 TA 246
>sp|Q7Q323|FEN1_ANOGA Flap endonuclease 1 OS=Anopheles gambiae GN=Fen1 PE=3 SV=2
Length = 383
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 91/195 (46%), Gaps = 35/195 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
LL + IK + VFDG+ P ++ E ++R +R KA LD+ +EA +
Sbjct: 74 LLENGIKPVYVFDGKP-PDLKSGELNKRAERREEAQKA-----LDKATEAGATEDIEKFN 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT A + R GV + AP EA+AQ A L AG TED D L FG+
Sbjct: 128 RRLVKVTKHHANEAKELLRLMGVPYVEAPCEAEAQCAALVRAGKVYATATEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F T +F +CIL GCDY
Sbjct: 188 NILLRHLTFS------------EARKMPVQEFAYEKVLKGFELTQDEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
I+G+G KKA + +
Sbjct: 236 DTIRGIGPKKAIELI 250
>sp|A8AAC1|FEN_IGNH4 Flap endonuclease 1 OS=Ignicoccus hospitalis (strain KIN4/I / DSM
18386 / JCM 14125) GN=fen PE=3 SV=1
Length = 350
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRG--SEAQSHLRQSV 64
+L + IKV VFDG P K T E R+++ +A+ + RG EA+ + + S
Sbjct: 72 MLENGIKVAYVFDG--APPKLKTREIERRQKLKQEAEKKYEEAVRRGDVEEARKYAQMSA 129
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
+T +M + A GV + AP E +AQ AY+ G ++D D L+FG+ +++
Sbjct: 130 KLTKEMVEEAKRLLEAMGVPWVQAPSEGEAQAAYMAAKGDVWASASQDYDSLLFGSPRLV 189
Query: 125 YKLDLSGNCCFMDREKLPS------------ALKMPLAKF--TDAKFRYMCILSGCDYWT 170
L +SG R KLP+ LK L + T + + +L G DY
Sbjct: 190 RNLAVSG------RRKLPNKNVYVEVKPEEITLKCVLEELGITREQLVAIAVLIGTDYTP 243
Query: 171 GIKGMGLKKAKDYVFSIMDPDFENALRKINV 201
G+KG+G K A YV S D E L + V
Sbjct: 244 GVKGVGPKTALRYVKSY--GDLERVLTALGV 272
>sp|A8XL25|FEN1_CAEBR Flap endonuclease 1 OS=Caenorhabditis briggsae GN=crn-1 PE=3 SV=1
Length = 382
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ + IK + VFDG+ K E R ++R + E EA+ R+ V V
Sbjct: 74 MIDNGIKPVYVFDGKPPDMKSGELEKRTERRAEAEKALTEAKEKGDAKEAEKFERRLVKV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + V Q G+ + AP EA+AQ A L AG TED D L F
Sbjct: 134 TKQQNEEVKQLLGLMGIPVVEAPCEAEAQCANLVKAGKVYGTATEDMDALTF-------- 185
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
G+C + P A K+P+ +F T +F +CIL GCDY I+G+
Sbjct: 186 ----GSCVLLRHLLAPEAKKIPIKEFHLARVLEEMQLTKDQFIDLCILLGCDYCGTIRGI 241
Query: 176 GLKKAKDYV 184
G KKA + +
Sbjct: 242 GPKKAVELI 250
>sp|A5KAL1|FEN1_PLAVS Flap endonuclease 1 OS=Plasmodium vivax (strain Salvador I) GN=FEN1
PE=3 SV=1
Length = 623
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ + AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTRKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGNCCFMDREKLPS----------------ALKMPLAKFTDAKFRYMCILSGC 166
+I L+ + + ++ K S L + + +F D CIL GC
Sbjct: 192 LIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFID-----FCILCGC 246
Query: 167 DYWTGIKGMGLKKAKDYV 184
DY IKG+G K A + +
Sbjct: 247 DYCDTIKGIGSKTAYNLI 264
>sp|B3MDA3|FEN1_DROAN Flap endonuclease 1 OS=Drosophila ananassae GN=Fen1 PE=3 SV=1
Length = 388
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSV 64
LL + IK + VFDG+ L + E + R++ KAA D +E + R+ V
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAATEAGDD--AEIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + A + + GV + AP EA+AQ A L AG TED D L FG+ K++
Sbjct: 132 RVTKEHAREAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTKLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTGIK 173
L S A KMP+ +F+ + +F +CIL GCDY IK
Sbjct: 192 RYLTYS------------EARKMPVKEFSYEKLLDGLGVNNREFIDLCILLGCDYCESIK 239
Query: 174 GMGLKKAKDYVFSIMD 189
G+G K+A + + + D
Sbjct: 240 GIGPKRAIELINNYRD 255
>sp|B4J6M4|FEN1_DROGR Flap endonuclease 1 OS=Drosophila grimshawi GN=Fen1 PE=3 SV=1
Length = 388
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQSV 64
LL + IK + VFDG K R ++RD +A+ A + G EAQ R+ V
Sbjct: 74 LLDNGIKPVYVFDGAPPDMKSGELAKRAERRD--EAEKALKAATEAGDEAQIEKFNRRLV 131
Query: 65 DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKII 124
VT + + + + GV + AP EA+AQ A L AG TED D L FG+ K++
Sbjct: 132 RVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSCKLL 191
Query: 125 YKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIK 173
L S A KMP+ +F T +F +CIL GCDY I+
Sbjct: 192 RYLTYS------------EARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCESIR 239
Query: 174 GMGLKKAKDYVFSIMDPDFENALRKINV 201
G+G K+A + + S D E L I+
Sbjct: 240 GVGPKRAIELIKSYR--DIETILENIDT 265
>sp|A8J2Z9|FEN1_CHLRE Flap endonuclease 1 OS=Chlamydomonas reinhardtii GN=FEN1 PE=3 SV=1
Length = 396
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
+L IK + VFDG+ K+ D+ +R +A A E L++ EA + +
Sbjct: 75 MLEAGIKPVYVFDGKPPQLKQ----DQLAQRTERRADANE--ALEKAKEAGDQEAIEKYS 128
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
++SV VT + + R GV + AP EA+AQ A + +G + TED D L FGA
Sbjct: 129 KRSVRVTREHNDECKRLLRLMGVPVVEAPTEAEAQCAEMAKSGLVYGLATEDMDALTFGA 188
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++I L PS+ +P+ +F TD +F +CIL GCDY
Sbjct: 189 PRVIRHL------------MAPSSQNVPVQEFDREVALRELELTDDQFIDLCILMGCDYC 236
Query: 170 TGIKGMGLKKA 180
I+G+G +A
Sbjct: 237 GTIRGIGAVRA 247
>sp|B3L014|FEN1_PLAKH Flap endonuclease 1 OS=Plasmodium knowlesi (strain H) GN=FEN1 PE=3
SV=1
Length = 595
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ + AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGNCCFMDREKLPS----------------ALKMPLAKFTDAKFRYMCILSGC 166
+I L+ + + ++ K S L + + +F D CIL GC
Sbjct: 192 LIRNLNANASSTSQNKNKNSSKRGYILTEINLEQVLKGLNLNMNEFID-----FCILCGC 246
Query: 167 DYWTGIKGMGLKKAKDYV 184
DY IKG+G K A + +
Sbjct: 247 DYCDTIKGIGSKTAYNLI 264
>sp|B4LM90|FEN1_DROVI Flap endonuclease 1 OS=Drosophila virilis GN=Fen1 PE=3 SV=1
Length = 386
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA + G EA+ R+
Sbjct: 74 LLDNGIKPVYVFDGQPPDLKSGELAKRAERREEAEKALKAA----TEAGDEAEIDKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + + + + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSCK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F T +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMDPDFENALRKINV 201
IKG+G K+A + + S D E L I+
Sbjct: 238 IKGVGPKRAIELIKSYR--DIETILENIDT 265
>sp|A4VDN2|FEN1_TETTS Flap endonuclease 1 OS=Tetrahymena thermophila (strain SB210)
GN=FEN1 PE=3 SV=1
Length = 384
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 6 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVD 65
ML+ + +K + VFDG+ K R+K +D K + EA ++++
Sbjct: 77 MLIENGLKPVWVFDGKPPQFKSGELARRQKAKDEAAEKQKTAIETGDMQEALKQEQRNLH 136
Query: 66 VTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIY 125
+T +M + I+ + GV I+AP EA+AQ A L A +TED D L F ++
Sbjct: 137 ITKEMKADAIKLLQLVGVPVILAPCEAEAQCAALAKAKKVFATVTEDMDALTFATPFLLR 196
Query: 126 KLDLSGN-CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 176
L+ ++ EK+ LK+ +F D +CIL GCDY I+G+G
Sbjct: 197 NLNSKKEPITEINYEKMLQELKLSHNEFVD-----LCILCGCDYLGRIEGVG 243
>sp|A3FPN7|FEN1_CRYPI Flap endonuclease 1 OS=Cryptosporidium parvum (strain Iowa II)
GN=FEN1 PE=3 SV=1
Length = 490
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKA-AELLILDRGSEAQSHLRQSV- 64
LL IK + VFDG A ++D KRD + KA AEL + + +QSV
Sbjct: 76 LLEAGIKPVFVFDG----APPEMKKDELTKRDERREKALAELEKAQEIGDEELIKKQSVR 131
Query: 65 --DVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
VT K +V + G+ CI AP EA+AQ A L G V+TED+D L FG
Sbjct: 132 TIHVTKKQVEDVKKLLGFLGMPCIDAPSEAEAQCAELCKDGLVYGVVTEDADSLTFGTPI 191
Query: 123 IIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDA---------KFRYMCILSGCDYWTG 171
I +L+ S + + +K PS K M + K + +F +CILSGCDY
Sbjct: 192 QIKQLNFSESSNKI-TDKSPSKQKNGMQIIKLSLILSELDINMDQFIDLCILSGCDYCGT 250
Query: 172 IKGMGLKKA 180
I+G+G A
Sbjct: 251 IRGIGTSTA 259
>sp|Q2FNC9|FEN_METHJ Flap endonuclease 1 OS=Methanospirillum hungatei (strain JF-1 / DSM
864) GN=fen PE=3 SV=1
Length = 333
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 27/235 (11%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L I+ + +FDG+ K T ++RR R+ K K + + A + S +
Sbjct: 69 FLTQGIRPVFIFDGKSPEMKGRTIQERRDVREESKEKWDQAKKEGDLAGAFRYAMSSTAI 128
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + Q + G+ + AP E +AQ AY+ + G ADYV+++D D L+FG ++
Sbjct: 129 DAYILSSARQLIQLMGLPVVDAPSEGEAQGAYMVLKGDADYVVSQDYDTLLFGTPVLVRN 188
Query: 127 LDLSGNCCFMDREKLPSALKMPLA------KFTDAKFRYMCILSGCDYWTGIKGMGLKKA 180
L +SG R+ ++ L+ T + + IL+G D+ GI+G+G K
Sbjct: 189 LTISGKRRLHGRQITVQPERIVLSDVLSTLDITREQLIEIAILTGTDFNPGIRGIGAK-- 246
Query: 181 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSF--HNTNLMFLYQPVYD 233
L+KI K G + I +E L F FL PV D
Sbjct: 247 -------------TGLKKI----KSGEFDSIIREKLPDFDPEPVRSFFLNPPVTD 284
>sp|A9VB27|FEN1_MONBE Flap endonuclease 1 OS=Monosiga brevicollis GN=FEN1 PE=3 SV=1
Length = 368
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
++ H IK + VFDG+ K R +R +A E + + R+ V V
Sbjct: 74 MVNHGIKPLYVFDGKPPTMKSGELLKRGARRKEAQANLEEATEQGDTEQMEKFSRRLVHV 133
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + Q G+ I+AP EA+AQ A L G TED D L FG ++
Sbjct: 134 TREHNEQCRQLLTLMGIPFIIAPTEAEAQCAELVKGGKVFATATEDMDALTFGTTVLLRH 193
Query: 127 LDLSGNCCFMDREKLP--------SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 178
+ F + K+P L+M + +F D MCIL GCDY IKG+G +
Sbjct: 194 M------TFSEARKMPIQEFRLQKGGLEMSMEEFID-----MCILLGCDYCDSIKGIGRQ 242
Query: 179 KA 180
KA
Sbjct: 243 KA 244
>sp|B5DUR8|FEN1_DROPS Flap endonuclease 1 OS=Drosophila pseudoobscura pseudoobscura
GN=Fen1 PE=3 SV=1
Length = 386
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A+ R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAEIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>sp|B4QIG6|FEN1_DROSI Flap endonuclease 1 OS=Drosophila simulans GN=Fen1 PE=3 SV=1
Length = 385
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINTYRD 255
>sp|B4HTA1|FEN1_DROSE Flap endonuclease 1 OS=Drosophila sechellia GN=Fen1 PE=3 SV=1
Length = 385
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINTYRD 255
>sp|B4P5U9|FEN1_DROYA Flap endonuclease 1 OS=Drosophila yakuba GN=Fen1 PE=3 SV=1
Length = 387
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 91/198 (45%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHANEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ K F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYEKLLEGLSINSREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>sp|B4GIM3|FEN1_DROPE Flap endonuclease 1 OS=Drosophila persimilis GN=Fen1 PE=3 SV=1
Length = 386
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQ--SHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A+ R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAEIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>sp|Q7K7A9|FEN1_DROME Flap endonuclease 1 OS=Drosophila melanogaster GN=Fen1 PE=2 SV=1
Length = 385
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ + +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINTYRD 255
>sp|B3NP61|FEN1_DROER Flap endonuclease 1 OS=Drosophila erecta GN=Fen1 PE=3 SV=1
Length = 387
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 91/198 (45%), Gaps = 31/198 (15%)
Query: 7 LLAHKIKVIMVFDGR--HLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA--QSHLRQ 62
LL + IK + VFDG+ L + E + R++ KAA D G +A + R+
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAA----TDAGDDAGIEKFNRR 129
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
V VT + A + GV + AP EA+AQ A L AG TED D L FG+ K
Sbjct: 130 LVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTK 189
Query: 123 IIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAKFRYMCILSGCDYWTG 171
++ L S A KMP+ +F+ +F +CIL GCDY
Sbjct: 190 LLRYLTYS------------EARKMPVKEFSYDKLLEGLSINSREFIDLCILLGCDYCES 237
Query: 172 IKGMGLKKAKDYVFSIMD 189
IKG+G K+A + + + D
Sbjct: 238 IKGIGPKRAIELINNYRD 255
>sp|Q4Z015|FEN1_PLABA Flap endonuclease 1 OS=Plasmodium berghei (strain Anka) GN=FEN1
PE=3 SV=1
Length = 478
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQS--- 63
L+ + +K I VFDG K + E R +KR KA ELLI + + +QS
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLIKAKEENLEEIKKQSGRT 131
Query: 64 VDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKI 123
V VT K + G+ I +P EA+AQ A+L A TED+D LVFG K +
Sbjct: 132 VRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKIL 191
Query: 124 IYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDY 168
I L+ + + ++ E++ LK+ + +F D CIL GCDY
Sbjct: 192 IRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFID-----FCILCGCDY 246
Query: 169 WTGIKGMGLKKAKDYV 184
IKG+G K A + +
Sbjct: 247 CDTIKGIGSKTAYNLI 262
>sp|Q9GZ01|FEN1_PLAFA Flap endonuclease 1 OS=Plasmodium falciparum GN=FEN1 PE=2 SV=1
Length = 650
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + ++ E++ L + + +F D CIL GCD
Sbjct: 192 LIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>sp|B4FHY0|FEN1_MAIZE Flap endonuclease 1 OS=Zea mays GN=FEN1 PE=2 SV=1
Length = 379
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KRD E + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGDKDAIEKLSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 135 TRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASEDMDSLTFGAPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CIL GCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>sp|Q7RME3|FEN1_PLAYO Flap endonuclease 1 OS=Plasmodium yoelii yoelii GN=FEN1 PE=3 SV=1
Length = 480
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGS----EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELLI + E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKRQ----KAEELLIKAKAEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I +P EA+AQ A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYEMAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + + ++ E++ LK+ + +F D CIL GCD
Sbjct: 192 LIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>sp|Q9SXQ6|FEN11_ORYSJ Flap endonuclease 1-A OS=Oryza sativa subsp. japonica GN=FEN-1a
PE=2 SV=1
Length = 380
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR+ + E + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 135 TKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>sp|B8AW67|FEN11_ORYSI Flap endonuclease 1-A OS=Oryza sativa subsp. indica GN=FEN1a PE=3
SV=1
Length = 380
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K+ R KR+ + E + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + R GV + AP EA+A+ A L I V +ED D L FGA + +
Sbjct: 135 TKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY IKG+
Sbjct: 195 L--------MD----PSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIKGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>sp|Q7K734|FEN1_PLAF7 Flap endonuclease 1 OS=Plasmodium falciparum (isolate 3D7) GN=FEN1
PE=3 SV=1
Length = 672
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELL--ILDRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLKKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I AP EA++Q A+L A TED+D LVFG K
Sbjct: 132 TVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + ++ E++ L + + +F D CIL GCD
Sbjct: 192 LIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKA 180
Y IKG+G K A
Sbjct: 247 YCDTIKGIGSKTA 259
>sp|Q54NU0|FEN1_DICDI Flap endonuclease 1 OS=Dictyostelium discoideum GN=repG PE=3 SV=1
Length = 384
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L++ IK I VFDG K R+ +R K E + E Q ++ + V
Sbjct: 75 LISRGIKPIYVFDGSAPVLKSGELAKRQARRKEAKENLKEATEVGTNEEVQKFAKRVITV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T K + I+ GV + AP EA+AQ A + G A +ED D L G+ ++ +
Sbjct: 135 TRKQNEDCIKLLTLMGVPIVKAPCEAEAQCAEIVKKGKAWATGSEDMDSLTLGSTVLLRR 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGM 175
L S A KMP+ +F T +F + IL GCDY IKG+
Sbjct: 195 LFFS------------EAKKMPILEFELQSVLEGLGLTQDEFIDLSILLGCDYCDSIKGI 242
Query: 176 GLKKAKDYV 184
G K+A + +
Sbjct: 243 GPKRAIELI 251
>sp|O65251|FEN1_ARATH Flap endonuclease 1 OS=Arabidopsis thaliana GN=FEN1 PE=2 SV=2
Length = 383
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
LL IK + VFDG+ K R KR A + + + + +++V V
Sbjct: 75 LLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKV 134
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
T + + + R GV + A EA+AQ A L +G V +ED D L FGA K +
Sbjct: 135 TKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRH 194
Query: 127 LDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGM 175
L MD PS+ K+P+ +F AK F +CILSGCDY I+G+
Sbjct: 195 L--------MD----PSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 242
Query: 176 GLKKA 180
G + A
Sbjct: 243 GGQTA 247
>sp|Q4XXP8|FEN1_PLACH Flap endonuclease 1 OS=Plasmodium chabaudi GN=FEN1 PE=3 SV=1
Length = 479
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLIL--DRGS--EAQSHLRQ 62
L+ + +K I VFDG K + E R +KR KA ELL+ + G+ E + +
Sbjct: 76 LMENGLKPIYVFDGAPPELKGSELEKRGEKR----QKAEELLLKAKEEGNLEEIKKQSGR 131
Query: 63 SVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKK 122
+V VT K + G+ I +P EA+AQ A+L A TED+D LVFG K
Sbjct: 132 TVRVTKKQNEEAKKLLTLMGIPVIESPCEAEAQCAFLTKYDMAHATATEDADALVFGTKI 191
Query: 123 IIYKLDLSGN---------------CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 167
+I L+ + + ++ E++ LK+ + +F D CIL GCD
Sbjct: 192 LIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTMDEFID-----FCILCGCD 246
Query: 168 YWTGIKGMGLKKAKDYV 184
Y IKG+G K A + +
Sbjct: 247 YCDTIKGIGSKTAYNLI 263
>sp|Q178M1|FEN1_AEDAE Flap endonuclease 1 OS=Aedes aegypti GN=Fen1 PE=3 SV=1
Length = 380
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEA------QSHL 60
LL + IK + VFDG+ P ++ E +R ++ KA LD+ +EA
Sbjct: 74 LLENGIKPVYVFDGKP-PDLKSGELTKRAEKREEAQKA-----LDKATEAGVTEDIDKFN 127
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
R+ V VT + + + + GV + AP EA+AQ A L G TED D L FG+
Sbjct: 128 RRLVKVTKQHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKGGKVYATATEDMDALTFGS 187
Query: 121 KKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYW 169
++ L S A KMP+ +F T +F +CIL GCDY
Sbjct: 188 NILLRHLTFS------------EARKMPVQEFNYDKILQGLELTRDEFIDLCILLGCDYC 235
Query: 170 TGIKGMGLKKAKDYV 184
I+G+G KKA + +
Sbjct: 236 DSIRGIGPKKAVELI 250
>sp|Q976H6|FEN_SULTO Flap endonuclease 1 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=fen PE=3 SV=2
Length = 351
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSH------KAKAAELLILDRGSEAQSHL 60
+L I I VFDG+ P ++A E +RRKK +AK + + SE + +
Sbjct: 68 ILEEGIIPIYVFDGKP-PEQKAQELERRKKVKEEAEKKLEQAKTEGSI---KTSELKKYA 123
Query: 61 RQSVDVTHKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGA 120
+ S+ +T++MA + +A G+ + AP E +A+ AY+NI G + ++D D L+FGA
Sbjct: 124 QMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLLFGA 183
Query: 121 KKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAK--FTDAKFRYMCILSGC 166
K++I L LSG + KLP L L K T + + I+ G
Sbjct: 184 KRLIRNLTLSG------KRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 237
Query: 167 DYW-TGIKGMGLKKA 180
DY GIKG G+K A
Sbjct: 238 DYNPDGIKGYGVKTA 252
>sp|O50123|FEN_PYRHO Flap endonuclease 1 OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=fen PE=1
SV=1
Length = 343
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 7 LLAHKIKVIMVFDGRHLPAKEATEEDRRKKRDSHKAKAAELLILDRGSEAQSHLRQSVDV 66
L+ IK VFDG+ K E RR+ R+ + K E L EA+ + +++ V
Sbjct: 68 LMEAGIKPAYVFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKV 127
Query: 67 THKMALNVIQACRARGVDCIVAPFEADAQMAYLNIAGYADYVITEDSDLLVFGAKKIIYK 126
+ + + + G+ I AP E +AQ AY+ G ++D D L+FGA ++I
Sbjct: 128 NEMLIEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRN 187
Query: 127 LDLSGNCCFMDREKLPSA-----LKMPLA---------KFTDAKFRYMCILSGCDYW-TG 171
L ++G + K+P +K L K T K + IL G DY G
Sbjct: 188 LTITG------KRKMPGKDVYVEIKPELVVLDEVLKELKITREKLIELAILVGTDYNPGG 241
Query: 172 IKGMGLKKAKDYVFSIMDP 190
+KG+G KKA + V DP
Sbjct: 242 VKGIGPKKALEIVRYSRDP 260
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,579,768
Number of Sequences: 539616
Number of extensions: 5163068
Number of successful extensions: 14094
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 13628
Number of HSP's gapped (non-prelim): 251
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)