BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11828
(443 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357603281|gb|EHJ63691.1| exonuclease [Danaus plexippus]
Length = 654
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI YA VITEDSDL++FG K+++K+DL GN ++ KLP +K P+ +T KFR
Sbjct: 159 NIKNYAQLVITEDSDLILFGCTKVLFKMDLEGNGTLVETIKLPLVMKCPIEHYTFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFEN 292
MCILSGCDY + G+GL KA+ +V + D +F N
Sbjct: 219 MCILSGCDYLNSLPGIGLAKARQFVNASQDTNFAN 253
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
+L + +++K+DL GN ++ KLP +K P+ +T KFR MCILSGCDY + G+
Sbjct: 175 ILFGCTKVLFKMDLEGNGTLVETIKLPLVMKCPIEHYTFDKFRRMCILSGCDYLNSLPGI 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKI 156
GL KA+ +V + D +F NAL+K+
Sbjct: 235 GLAKARQFVNASQDTNFANALKKL 258
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+++ YC+KY+ ML + IK I+VFDGRHLPAK TE RR+ +I K++AAELL G
Sbjct: 54 IHIKYCLKYVTMLQSRNIKPILVFDGRHLPAKAMTELKRRETRDI-SKKRAAELLSLG 110
>gi|350425172|ref|XP_003494035.1| PREDICTED: exonuclease 1-like [Bombus impatiens]
Length = 619
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 19/143 (13%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI G AD VITEDSDL++FG KK+++K+DL+GN +D+E+L A+++P F F Y
Sbjct: 53 NINGIADVVITEDSDLILFGCKKVLFKMDLTGNGLLIDQEQLHLAMEIPSKHFNMDDFCY 112
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMK--VPA 315
MCILSGCDY + G+GL KA+ ++ D D + + L + L+MK V
Sbjct: 113 MCILSGCDYLPSLPGIGLNKARKFIKLNKDCDI--------HKALTRLGSYLNMKSLVVT 164
Query: 316 KWYRRIIGSIEVICGFSMATIPF 338
K YR F++A I F
Sbjct: 165 KEYRD---------SFTLAVITF 178
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+++K+DL+GN +D+E+L A+++P F F YMCILSGCDY + G+GL KA+
Sbjct: 76 VLFKMDLTGNGLLIDQEQLHLAMEIPSKHFNMDDFCYMCILSGCDYLPSLPGIGLNKARK 135
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
++ D D AL ++ Y + S V +TKE+ S
Sbjct: 136 FIKLNKDCDIHKALTRLGSYLNMKSLV-VTKEYRDS 170
>gi|340709250|ref|XP_003393224.1| PREDICTED: exonuclease 1-like [Bombus terrestris]
Length = 725
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 10/124 (8%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI G AD VITEDSDL++FG KK+++K+DL+GN +D+E+L A+++P F F Y
Sbjct: 159 NINGIADVVITEDSDLILFGCKKVLFKMDLTGNGLLVDQEQLHLAMEIPSKHFNMDDFCY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMK--VPA 315
MCILSGCDY + G+GL KA+ ++ D D + + L + L+MK V
Sbjct: 219 MCILSGCDYLPSLPGIGLNKARKFIKLNKDCDI--------HKALTRLGSYLNMKSLVVT 270
Query: 316 KWYR 319
K YR
Sbjct: 271 KEYR 274
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+++K+DL+GN +D+E+L A+++P F F YMCILSGCDY + G+GL KA+
Sbjct: 182 VLFKMDLTGNGLLVDQEQLHLAMEIPSKHFNMDDFCYMCILSGCDYLPSLPGIGLNKARK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
++ D D AL ++ Y + S V +TKE+ S
Sbjct: 242 FIKLNKDCDIHKALTRLGSYLNMKSLV-VTKEYRDS 276
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+YCMK+I+MLL+HKI+ I+VFDGRHLPAK TE RR+ + +++K EL+ G
Sbjct: 55 YVHYCMKFIHMLLSHKIRPILVFDGRHLPAKAQTEVKRRENRQT-NRRKGIELMQMG 110
>gi|328720558|ref|XP_001942954.2| PREDICTED: exonuclease 1-like [Acyrthosiphon pisum]
Length = 675
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 77/120 (64%), Gaps = 8/120 (6%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N++G A VITEDSDLL+FG K++++KLD +G +++EK+ ++ + +F+ KFRY
Sbjct: 159 NLSGIAHIVITEDSDLLLFGCKRVLFKLDQNGAGILIEQEKIHLSMNIKPEQFSFDKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKW 317
MCILSGCDY + G+GL KA+ ++ +PD Y + L + +++K+P ++
Sbjct: 219 MCILSGCDYLPSVPGVGLVKARQFITRTSEPDI--------YKALLRLGSFVNIKIPPEY 270
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 74/216 (34%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEAT--------EEDR-------------- 58
YV YCM++++MLL IK I+VFDG+HLPAK T EE+R
Sbjct: 55 YVYYCMRFVSMLLDQNIKPILVFDGQHLPAKADTESKRRKLREENRKKAAELMRLDKGKE 114
Query: 59 -----RKRAEIRHK-----------------------------------------QKAAE 72
R+ ++ HK + +
Sbjct: 115 ASSLLRRSIDVTHKMALNLIKRCREINVDCIVAPYEADSQLAYLNLSGIAHIVITEDSDL 174
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
LL +++KLD +G +++EK+ ++ + +F+ KFRYMCILSGCDY + G+
Sbjct: 175 LLFGCKRVLFKLDQNGAGILIEQEKIHLSMNIKPEQFSFDKFRYMCILSGCDYLPSVPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKI 168
GL KA+ ++ +PD AL ++GS+V I
Sbjct: 235 GLVKARQFITRTSEPDIYKALL------RLGSFVNI 264
>gi|307198944|gb|EFN79696.1| Exonuclease 1 [Harpegnathos saltator]
Length = 1355
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 64/92 (69%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI+G AD VITEDSDL +FG KKI++K+D +G+ ++++ L A+ M +F KFRY
Sbjct: 159 NISGIADVVITEDSDLTLFGCKKILFKMDFNGHGVLIEQDLLHLAMDMRSEQFNMDKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
+CILSGCDY + G+GL KA+ ++ DP+
Sbjct: 219 ICILSGCDYLPSLPGIGLGKARKFITRNTDPN 250
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I++K+D +G+ ++++ L A+ M +F KFRY+CILSGCDY + G+GL KA+
Sbjct: 182 ILFKMDFNGHGVLIEQDLLHLAMDMRSEQFNMDKFRYICILSGCDYLPSLPGIGLGKARK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
++ DP+ AL ++ + S +++T+E+
Sbjct: 242 FITRNTDPNIHKALTRVGSVLNMKS-LEVTQEY 273
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMK+INMLL H IK I+VFDGR LPAK+ TE RR+ ++ +++KA EL+ G
Sbjct: 55 YVLYCMKFINMLLRHDIKPILVFDGRQLPAKKKTEVKRREARQM-NRRKALELIKMG 110
>gi|157112576|ref|XP_001657573.1| exonuclease [Aedes aegypti]
gi|108878018|gb|EAT42243.1| AAEL006209-PA [Aedes aegypti]
Length = 770
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G A VITEDSDL++FG K+++KLDL+G ++ EKL A+ K+T KFRY
Sbjct: 159 NRKGIAQAVITEDSDLMLFGCSKVLFKLDLTGTGLMIEAEKLYLAMGCKEEKYTFDKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KAK +V + D D
Sbjct: 219 MCILSGCDYLESLPGIGLAKAKKFVLTTEDTDI 251
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 53/87 (60%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
+L S +++KLDL+G ++ EKL A+ K+T KFRYMCILSGCDY + G+
Sbjct: 175 MLFGCSKVLFKLDLTGTGLMIEAEKLYLAMGCKEEKYTFDKFRYMCILSGCDYLESLPGI 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVY 159
GL KAK +V + D D AL KI Y
Sbjct: 235 GLAKAKKFVLTTEDTDIRRALSKIPAY 261
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++ YC+KY+NMLL+H IK I+VFDGRHLPAK TE RR+ + +++AAELL G +
Sbjct: 54 VHIQYCLKYVNMLLSHDIKPILVFDGRHLPAKAMTEAKRRESRD-NSRKRAAELLRVGKT 112
>gi|270016559|gb|EFA13005.1| hypothetical protein TcasGA2_TC001970 [Tribolium castaneum]
Length = 581
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI G+AD VITEDSDLL+FG K++YK+D G ++ +K+ ++KM A FT KFRY
Sbjct: 159 NIKGFADCVITEDSDLLLFGCLKVMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYV 282
MCILSGCDY + G+GL+KA ++
Sbjct: 219 MCILSGCDYLDSLPGIGLRKALKFI 243
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
YV+YCMKYI LL+H I+ IMVFDGRHLPAK TEE RR+ ++ KQ L +S
Sbjct: 55 YVHYCMKYIKTLLSHDIRPIMVFDGRHLPAKMKTEEKRRESKKLARKQGMECLRLGHTSD 114
Query: 81 IYKL 84
YK
Sbjct: 115 AYKF 118
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++YK+D G ++ +K+ ++KM A FT KFRYMCILSGCDY + G+GL+KA
Sbjct: 182 VMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRYMCILSGCDYLDSLPGIGLRKALK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
++ + + L K+ Y K+ S + +T E+
Sbjct: 242 FISMTAETNPNIFLDKLARYLKMPSLI-VTDEY 273
>gi|213404598|ref|XP_002173071.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
gi|212001118|gb|EEB06778.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
Length = 566
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ D +ITEDSD+L+FGA+ +++KLD GNC + RE +P M L F D RY+ I
Sbjct: 162 GFIDGIITEDSDMLIFGARTVLFKLDNFGNCDVVRREDIPRLPNMSLQGFNDHMLRYLAI 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
SGCDY GI G+GLKKA ++ PD
Sbjct: 222 FSGCDYTDGIGGIGLKKAIRFIQRFPKPD 250
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++++KLD GNC + RE +P M L F D RY+ I SGCDY GI G+
Sbjct: 175 LIFGARTVLFKLDNFGNCDVVRREDIPRLPNMSLQGFNDHMLRYLAIFSGCDYTDGIGGI 234
Query: 133 GLKKAKDYVFSIMDPDFE----NALRKINV 158
GLKKA ++ PD A R +NV
Sbjct: 235 GLKKAIRFIQRFPKPDAAIRAMRAERSLNV 264
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
Y+ Y M I+ML + +K +VFDG LP+K TEE RR R
Sbjct: 55 YIQYAMHRISMLTYYGVKPFVVFDGGPLPSKLGTEEKRRAR 95
>gi|383861101|ref|XP_003706025.1| PREDICTED: exonuclease 1-like [Megachile rotundata]
Length = 612
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 63/85 (74%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI+G AD +ITEDSDL++FG KK+ +K+D++G+ +D+++L A+ + F+ +FRY
Sbjct: 51 NISGIADVIITEDSDLILFGCKKVFFKMDVNGSGILVDQDRLHVAMDVSSEHFSMDQFRY 110
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYV 282
MCILSGCDY + G+GL KA+ ++
Sbjct: 111 MCILSGCDYLPSLPGIGLGKARKFI 135
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ +K+D++G+ +D+++L A+ + F+ +FRYMCILSGCDY + G+GL KA+
Sbjct: 74 VFFKMDVNGSGILVDQDRLHVAMDVSSEHFSMDQFRYMCILSGCDYLPSLPGIGLGKARK 133
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
++ D + AL ++ Y + S V +T+E+
Sbjct: 134 FIRINTDSNIHRALTRLGSYLNMKSVV-VTQEY 165
>gi|91094765|ref|XP_967471.1| PREDICTED: similar to exonuclease [Tribolium castaneum]
Length = 563
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI G+AD VITEDSDLL+FG K++YK+D G ++ +K+ ++KM A FT KFRY
Sbjct: 159 NIKGFADCVITEDSDLLLFGCLKVMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYV 282
MCILSGCDY + G+GL+KA ++
Sbjct: 219 MCILSGCDYLDSLPGIGLRKALKFI 243
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
YV+YCMKYI LL+H I+ IMVFDGRHLPAK TEE RR+ ++ KQ L +S
Sbjct: 55 YVHYCMKYIKTLLSHDIRPIMVFDGRHLPAKMKTEEKRRESKKLARKQGMECLRLGHTSD 114
Query: 81 IYKL 84
YK
Sbjct: 115 AYKF 118
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++YK+D G ++ +K+ ++KM A FT KFRYMCILSGCDY + G+GL+KA
Sbjct: 182 VMYKMDSHGQGQLVEADKIHISMKMKQACFTMEKFRYMCILSGCDYLDSLPGIGLRKALK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
++ + + L K+ Y K+ S + +T E+
Sbjct: 242 FISMTAETNPNIFLDKLARYLKMPSLI-VTDEY 273
>gi|390334353|ref|XP_001198417.2| PREDICTED: uncharacterized protein LOC762697 isoform 1
[Strongylocentrotus purpuratus]
Length = 964
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
E+N G+ VITEDSDL+ FG KK+I KLDL+GNC +D +L A+K+ KFT KF
Sbjct: 31 EKN--GFVQAVITEDSDLIAFGCKKVIVKLDLAGNCMDVDSSRLNVAMKI-GEKFTPEKF 87
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
RYMCI++GCDY + G+G+ KA+ +PD
Sbjct: 88 RYMCIVAGCDYLASLPGIGIGKARKLFQLTANPDI 122
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I KLDL+GNC +D +L A+K+ KFT KFRYMCI++GCDY + G+G+ KA+
Sbjct: 54 VIVKLDLAGNCMDVDSSRLNVAMKI-GEKFTPEKFRYMCIVAGCDYLASLPGIGIGKARK 112
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
+PD ++++ K+ S +T E+
Sbjct: 113 LFQLTANPDITQVIKRMATTLKMKSTT-VTPEY 144
>gi|390334351|ref|XP_003723906.1| PREDICTED: uncharacterized protein LOC762697 isoform 3
[Strongylocentrotus purpuratus]
Length = 1028
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
E+N G+ VITEDSDL+ FG KK+I KLDL+GNC +D +L A+K+ KFT KF
Sbjct: 95 EKN--GFVQAVITEDSDLIAFGCKKVIVKLDLAGNCMDVDSSRLNVAMKI-GEKFTPEKF 151
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
RYMCI++GCDY + G+G+ KA+ +PD
Sbjct: 152 RYMCIVAGCDYLASLPGIGIGKARKLFQLTANPDI 186
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I KLDL+GNC +D +L A+K+ KFT KFRYMCI++GCDY + G+G+ KA+
Sbjct: 118 VIVKLDLAGNCMDVDSSRLNVAMKI-GEKFTPEKFRYMCIVAGCDYLASLPGIGIGKARK 176
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
+PD ++++ K+ S +T E+
Sbjct: 177 LFQLTANPDITQVIKRMATTLKMKSTT-VTPEY 208
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 31 MLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
ML A IK +MVFDGR+LPAK E+ RR+R E + +K + L G
Sbjct: 1 MLRALDIKPVMVFDGRNLPAKAGVEDSRRERRET-YSKKGRQFLREG 46
>gi|307171354|gb|EFN63252.1| Exonuclease 1 [Camponotus floridanus]
Length = 762
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 10/124 (8%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI+ AD VITEDSDL +FG KKI +K+D +GN +++++L A+ M +F KFRY
Sbjct: 159 NISNIADVVITEDSDLTLFGCKKIFFKMDFNGNGVLIEQDRLHLAMNMRPEEFDMNKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMK--VPA 315
+CILSGCDY + G+GL KA+ ++ D + + + + ++L+MK V
Sbjct: 219 ICILSGCDYLPSLPGIGLAKARKFISRNTDHNI--------HRALTRIGSVLNMKSLVVT 270
Query: 316 KWYR 319
+ YR
Sbjct: 271 QEYR 274
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMKYI+MLL +KIK I+VFDGR LPAKE TE RR+ +I ++QKA EL+ G
Sbjct: 55 YVLYCMKYIDMLLKYKIKPILVFDGRRLPAKEHTEIKRRQTRQI-NRQKAIELIQMG 110
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I +K+D +GN +++++L A+ M +F KFRY+CILSGCDY + G+GL KA+
Sbjct: 182 IFFKMDFNGNGVLIEQDRLHLAMNMRPEEFDMNKFRYICILSGCDYLPSLPGIGLAKARK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
++ D + AL +I + S V +T+E+
Sbjct: 242 FISRNTDHNIHRALTRIGSVLNMKSLV-VTQEY 273
>gi|390334349|ref|XP_003723905.1| PREDICTED: uncharacterized protein LOC762697 isoform 2
[Strongylocentrotus purpuratus]
Length = 1092
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
E+N G+ VITEDSDL+ FG KK+I KLDL+GNC +D +L A+K+ KFT KF
Sbjct: 159 EKN--GFVQAVITEDSDLIAFGCKKVIVKLDLAGNCMDVDSSRLNVAMKI-GEKFTPEKF 215
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
RYMCI++GCDY + G+G+ KA+ +PD
Sbjct: 216 RYMCIVAGCDYLASLPGIGIGKARKLFQLTANPDI 250
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I KLDL+GNC +D +L A+K+ KFT KFRYMCI++GCDY + G+G+ KA+
Sbjct: 182 VIVKLDLAGNCMDVDSSRLNVAMKI-GEKFTPEKFRYMCIVAGCDYLASLPGIGIGKARK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
+PD ++++ K+ S +T E+
Sbjct: 241 LFQLTANPDITQVIKRMATTLKMKSTT-VTPEY 272
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YC+KY+NML A IK +MVFDGR+LPAK E+ RR+R E + +K + L G
Sbjct: 55 YVRYCLKYVNMLRALDIKPVMVFDGRNLPAKAGVEDSRRERRET-YSKKGRQFLREG 110
>gi|380014181|ref|XP_003691118.1| PREDICTED: exonuclease 1-like [Apis florea]
Length = 646
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 10/124 (8%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI D VITEDSDL++FG KKI++K+D++GN +D+E+L A+ + F+ KF Y
Sbjct: 159 NINRIVDVVITEDSDLILFGCKKILFKMDVNGNGLLIDQEQLHLAMDVHSEHFSMDKFLY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMK--VPA 315
MCILSGCDY + G+GL KAK ++ D D Y + L + L+MK V +
Sbjct: 219 MCILSGCDYLPSLPGIGLNKAKKFISRNTDCDI--------YRALTRLGSYLNMKSLVVS 270
Query: 316 KWYR 319
YR
Sbjct: 271 NKYR 274
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I++K+D++GN +D+E+L A+ + F+ KF YMCILSGCDY + G+GL KAK
Sbjct: 182 ILFKMDVNGNGLLIDQEQLHLAMDVHSEHFSMDKFLYMCILSGCDYLPSLPGIGLNKAKK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYV 166
++ D D AL ++ Y + S V
Sbjct: 242 FISRNTDCDIYRALTRLGSYLNMKSLV 268
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMK+I MLL++KI I+VFDG+HLPAK TE RR+ + +++KA EL+ G
Sbjct: 55 YVRYCMKFIYMLLSYKITPILVFDGKHLPAKAETEAKRRENRQT-NRRKANELIQMG 110
>gi|328778065|ref|XP_623359.2| PREDICTED: exonuclease 1-like [Apis mellifera]
Length = 618
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 10/124 (8%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI D VITEDSDL++FG KK+++K+DL+GN +D+E+L + + F F Y
Sbjct: 53 NINRIVDVVITEDSDLILFGCKKVLFKMDLNGNGLLVDQEQLYLVMDVRSEHFNMDNFLY 112
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMK--VPA 315
MCILSGCDY + + G+GL KAK ++ D D Y + L + L+MK V +
Sbjct: 113 MCILSGCDYLSSLPGIGLNKAKKFISRNADCDI--------YRALTRLGSYLNMKSLVVS 164
Query: 316 KWYR 319
K YR
Sbjct: 165 KEYR 168
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+++K+DL+GN +D+E+L + + F F YMCILSGCDY + + G+GL KAK
Sbjct: 76 VLFKMDLNGNGLLVDQEQLYLVMDVRSEHFNMDNFLYMCILSGCDYLSSLPGIGLNKAKK 135
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
++ D D AL ++ Y + S V ++KE+ S
Sbjct: 136 FISRNADCDIYRALTRLGSYLNMKSLV-VSKEYRDS 170
>gi|332021099|gb|EGI61486.1| Exonuclease 1 [Acromyrmex echinatior]
Length = 749
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 11/123 (8%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI+G AD VITEDSDL +FG KKI +K+DL GN + +++L A+ + +F KFR+
Sbjct: 159 NISGIADVVITEDSDLTLFGCKKIFFKMDLVGNGILIAQDQLHLAMNVRSEQFEMDKFRH 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMK---VP 314
+CILSGCDY + G+GL KA+ ++ D + + + L ++L+MK VP
Sbjct: 219 ICILSGCDYLPSLPGIGLGKARKFITKSTDQNI--------HRALTRLGSVLNMKSLVVP 270
Query: 315 AKW 317
++
Sbjct: 271 QEY 273
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMKYINMLL +KIK I+VFDG+ L AKE TE RRK E+ +++KA EL+ G
Sbjct: 55 YVVYCMKYINMLLKYKIKPILVFDGQRLLAKEQTEIKRRKAREL-NRRKAIELIQMG 110
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I +K+DL GN + +++L A+ + +F KFR++CILSGCDY + G+GL KA+
Sbjct: 182 IFFKMDLVGNGILIAQDQLHLAMNVRSEQFEMDKFRHICILSGCDYLPSLPGIGLGKARK 241
Query: 140 YVFSIMDPDFENALRKI 156
++ D + AL ++
Sbjct: 242 FITKSTDQNIHRALTRL 258
>gi|195035513|ref|XP_001989222.1| GH10168 [Drosophila grimshawi]
gi|193905222|gb|EDW04089.1| GH10168 [Drosophila grimshawi]
Length = 631
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG A Y++TEDSDL +FGA++II+KLDLSG +D EKL A+ +F KFR
Sbjct: 159 NRAGIAQYIVTEDSDLTLFGAQRIIFKLDLSGAGLLVDAEKLHLAMGCREERFQFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFMLKTEQDDM 251
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 47/86 (54%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L II+KLDLSG +D EKL A+ +F KFR MCILSGCDY + G+G
Sbjct: 176 LFGAQRIIFKLDLSGAGLLVDAEKLHLAMGCREERFQFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFMLKTEQDDMRIALKKIPQY 261
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
LYV YC+KY+ +L+++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 LYVQYCLKYVQLLVSYNIKPILVFDGQHLPAKALTEQ-RRRESRQQSKKRAAELLRLG 110
>gi|392577150|gb|EIW70280.1| hypothetical protein TREMEDRAFT_43853 [Tremella mesenterica DSM
1558]
Length = 361
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ D +ITEDSDLLVFG K++++KLD +G C ++ RE+L S P+ +TD FR M +
Sbjct: 162 GWVDGIITEDSDLLVFGCKQVVFKLDHNGQCVWIHRERLASIRDFPMHGWTDHHFRRMAM 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I+G+G+K A
Sbjct: 222 LSGCDYLDSIQGIGIKTA 239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+++KLD +G C ++ RE+L S P+ +TD FR M +LSGCDY I+G+G+K A
Sbjct: 181 QVVFKLDHNGQCVWIHRERLASIRDFPMHGWTDHHFRRMAMLSGCDYLDSIQGIGIKTA 239
>gi|345486309|ref|XP_001603157.2| PREDICTED: exonuclease 1-like [Nasonia vitripennis]
Length = 730
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI+G D VITEDSDL +FG KKI +K+D+ G +++++L A+ + L F KFR+
Sbjct: 159 NISGIVDVVITEDSDLTLFGCKKIFFKMDMYGYGVLVEQDRLHLAMGLRLPDFHMDKFRH 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMK--VPA 315
MCILSGCDY + G+GL KA ++ D + Y + L + L+MK V
Sbjct: 219 MCILSGCDYLASLPGIGLNKACKFIVKNTDDNI--------YNALLRLASSLNMKSLVVT 270
Query: 316 KWYR 319
K YR
Sbjct: 271 KEYR 274
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMK++NMLL H IK I+VFDGRHLPAK TE RR+ E ++++AAEL+ G
Sbjct: 55 YVKYCMKFVNMLLGHNIKPILVFDGRHLPAKAETEVKRRESREA-NRKRAAELIKMG 110
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I +K+D+ G +++++L A+ + L F KFR+MCILSGCDY + G+GL KA
Sbjct: 182 IFFKMDMYGYGVLVEQDRLHLAMGLRLPDFHMDKFRHMCILSGCDYLASLPGIGLNKACK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
++ D + NAL ++ + S V +TKE+
Sbjct: 242 FIVKNTDDNIYNALLRLASSLNMKSLV-VTKEY 273
>gi|195115002|ref|XP_002002056.1| GI14203 [Drosophila mojavensis]
gi|193912631|gb|EDW11498.1| GI14203 [Drosophila mojavensis]
Length = 661
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG A+Y+ITEDSDL +FGA+K+I+KLDL+GN ++ +K A+ ++ KFR
Sbjct: 159 NKAGIAEYIITEDSDLTLFGAEKVIFKLDLNGNGLLVEADKFHLAMGCSKERYHFEKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQDDM 251
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
LYV YCMK++ ML+++ IKVI+VFDG+HLPAK TE+ RR+ A + +++A ELL G
Sbjct: 54 LYVQYCMKFVQMLMSYDIKVILVFDGQHLPAKALTEQ-RRREARQQSQKRAKELLRLG 110
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +I+KLDL+GN ++ +K A+ ++ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAEKVIFKLDLNGNGLLVEADKFHLAMGCSKERYHFEKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQDDMRIALKKIPQY 261
>gi|256072777|ref|XP_002572710.1| exonuclease [Schistosoma mansoni]
gi|353229077|emb|CCD75248.1| putative exonuclease [Schistosoma mansoni]
Length = 728
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK-LPSALKMPLAKFTDAKFR 256
N GYAD+VITEDSDLL+FG +++++KLDLSG+ + + +P ++FT++KFR
Sbjct: 159 NRTGYADFVITEDSDLLLFGCRQVVFKLDLSGSGVLVAAASGICECCGIPASQFTESKFR 218
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
YM I++GCDY++GI G+GL A
Sbjct: 219 YMGIMAGCDYFSGIPGIGLNTA 240
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREK-LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 131
LL +++KLDLSG+ + + +P ++FT++KFRYM I++GCDY++GI G
Sbjct: 175 LLFGCRQVVFKLDLSGSGVLVAAASGICECCGIPASQFTESKFRYMGIMAGCDYFSGIPG 234
Query: 132 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGS 164
+GL A + +F L K+ Y K+ +
Sbjct: 235 IGLNTAAKILRQTRITNFRELLLKLGFYTKLSN 267
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV Y +KYIN++ + +K I+VFDG LP+K T+ RR+ E+ +++KAAE L G
Sbjct: 55 YVRYVIKYINLMKSCNVKPILVFDGSDLPSKAETDLKRRETKEL-NRKKAAEYLMKG 110
>gi|347972009|ref|XP_313789.5| AGAP004491-PA [Anopheles gambiae str. PEST]
gi|333469129|gb|EAA09057.6| AGAP004491-PA [Anopheles gambiae str. PEST]
Length = 861
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A YVITEDSDL++FG +I++KLDL+G+ ++ KL A+ ++ AKFRY
Sbjct: 159 NRTDIAQYVITEDSDLVLFGCNRILFKLDLTGHGRLVEASKLHLAMGCREDRYKFAKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ DPD
Sbjct: 219 MCILSGCDYLDSLPGIGLGKACKFMLKTEDPDI 251
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I++KLDL+G+ ++ KL A+ ++ AKFRYMCILSGCDY + G+GL KA
Sbjct: 182 ILFKLDLTGHGRLVEASKLHLAMGCREDRYKFAKFRYMCILSGCDYLDSLPGIGLGKACK 241
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
++ DPD AL KI Y + + +T+E+
Sbjct: 242 FMLKTEDPDIRRALAKIPAYLNM-RQLSVTEEY 273
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRH--KQKAAELLHSG 77
+++ YC+KY+ +LL+H IK I+VFDG+HLPAK ATE RR EIR +++ AELL G
Sbjct: 54 MHIQYCLKYVQLLLSHNIKPILVFDGQHLPAKAATEAKRR---EIRETARKRGAELLRLG 110
>gi|312378187|gb|EFR24829.1| hypothetical protein AND_10346 [Anopheles darlingi]
Length = 835
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A YVITEDSDL++FG +I++KLDL+GN ++ KL A+ ++ KFR
Sbjct: 159 NRADIAQYVITEDSDLVLFGCSRILFKLDLAGNGRLVEATKLHLAMGCREERYQFVKFRQ 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ DPD
Sbjct: 219 MCILSGCDYLESLPGIGLAKACRFILKTEDPDM 251
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S I++KLDL+GN ++ KL A+ ++ KFR MCILSGCDY + G+GL KA
Sbjct: 180 SRILFKLDLAGNGRLVEATKLHLAMGCREERYQFVKFRQMCILSGCDYLESLPGIGLAKA 239
Query: 138 KDYVFSIMDPDFENALRKINVY 159
++ DPD + AL KI Y
Sbjct: 240 CRFILKTEDPDMKRALAKIPAY 261
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
++ YC+KY+ +LL++ IK I+VFDGRHLPAK TE RR+ E +++ AELL G
Sbjct: 55 HIRYCLKYVQLLLSYNIKPILVFDGRHLPAKAGTEAKRRESRE-NARKRGAELLRLG 110
>gi|322799338|gb|EFZ20726.1| hypothetical protein SINV_14613 [Solenopsis invicta]
Length = 608
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
NI+G AD VITEDSDL +FG KKI +K+D++GN ++R+ L A+ + +F KFR+
Sbjct: 62 NISGIADVVITEDSDLTLFGCKKIFFKMDINGNGVLIERDLLHLAMDVRPEQFDMDKFRH 121
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENR-KEYVKYAKVFPLTAIL 309
+ ILSGCDY + G+GL KA+ ++ D + ++ +++ LT IL
Sbjct: 122 IGILSGCDYLPSLPGIGLGKARKFITRNTDHNIHRVINTFLNFSRRTVLTKIL 174
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I +K+D++GN ++R+ L A+ + +F KFR++ ILSGCDY + G+GL KA+
Sbjct: 85 IFFKMDINGNGVLIERDLLHLAMDVRPEQFDMDKFRHIGILSGCDYLPSLPGIGLGKARK 144
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITK 170
++ D N R IN + +TK
Sbjct: 145 FITRNTD---HNIHRVINTFLNFSRRTVLTK 172
>gi|195484202|ref|XP_002090593.1| GE12717 [Drosophila yakuba]
gi|194176694|gb|EDW90305.1| GE12717 [Drosophila yakuba]
Length = 730
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 159 NKADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCNEEKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE 291
MCILSGCDY + G+GL KA ++ D +
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQDDMQ 252
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 VYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRDSRKQSKERAAELLRLG 110
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCNEEKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D + ALRKI Y
Sbjct: 236 LAKACKFILKTEQDDMQIALRKIPSY 261
>gi|195344874|ref|XP_002039001.1| GM17073 [Drosophila sechellia]
gi|194134131|gb|EDW55647.1| GM17073 [Drosophila sechellia]
Length = 732
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 159 NRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 251
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 VYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRDSRKQSKERAAELLRLG 110
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQEDMRIALKKIPSY 261
>gi|17137168|ref|NP_477145.1| tosca [Drosophila melanogaster]
gi|74873405|sp|Q24558.1|EXO1_DROME RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I; AltName:
Full=Protein tosca
gi|1419491|emb|CAA61431.1| Tosca [Drosophila melanogaster]
gi|7298467|gb|AAF53687.1| tosca [Drosophila melanogaster]
gi|223029525|gb|ACM78484.1| FI07641p [Drosophila melanogaster]
Length = 732
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 159 NRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 251
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 VYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRDSRKQSKERAAELLRLG 110
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQEDMRIALKKIPSY 261
>gi|389641011|ref|XP_003718138.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|351640691|gb|EHA48554.1| exonuclease 1 [Magnaporthe oryzae 70-15]
gi|440475111|gb|ELQ43812.1| exonuclease 1 [Magnaporthe oryzae Y34]
gi|440490176|gb|ELQ69760.1| exonuclease 1 [Magnaporthe oryzae P131]
Length = 780
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
ERN GY +I+EDSDLLVFGAK+++ KLD G C ++R + + ++ L +TDA+F
Sbjct: 159 ERN--GYVSGIISEDSDLLVFGAKRLLTKLDQHGQCIEVNRREFCAVREISLTGWTDAEF 216
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
R M I SGCDY GI MGLK A
Sbjct: 217 RQMAIFSGCDYLDGINKMGLKTA 239
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G C ++R + + ++ L +TDA+FR M I SGCDY GI M
Sbjct: 175 LVFGAKRLLTKLDQHGQCIEVNRREFCAVREISLTGWTDAEFRQMAIFSGCDYLDGINKM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
GLK A + P E +R++ GK KI++ +L +
Sbjct: 235 GLKTAYRMIRKHKTP--EKVIRQLQFEGKH----KISENYLAA 271
>gi|1419489|emb|CAA61430.1| Tosca [Drosophila melanogaster]
Length = 732
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 159 NRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 251
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 VYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRDSRKQSKERAAELLRLG 110
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQEDMRIALKKIPSY 261
>gi|195579936|ref|XP_002079812.1| GD21820 [Drosophila simulans]
gi|194191821|gb|EDX05397.1| GD21820 [Drosophila simulans]
Length = 604
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 31 NRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRR 90
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 91 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 123
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 48 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIG 107
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 108 LAKACKFILKTEQEDMRIALKKIPSY 133
>gi|15291899|gb|AAK93218.1| LD31018p [Drosophila melanogaster]
Length = 732
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 159 NRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 251
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 VYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRDSRKQSKERAAELLRLG 110
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQEDMRIALKKIPSY 261
>gi|195387976|ref|XP_002052668.1| GJ20464 [Drosophila virilis]
gi|194149125|gb|EDW64823.1| GJ20464 [Drosophila virilis]
Length = 646
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG A Y++TEDSDL +FGA+KII+KLDL+G ++ EK A+ ++ KFR
Sbjct: 159 NKAGIAQYIVTEDSDLTLFGAQKIIFKLDLNGAGLLVEAEKFHLAMGCTKERYRFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFMLKTEQDDM 251
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
LYV YC+KY+ MLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++A ELL G +
Sbjct: 54 LYVQYCLKYVLMLLSYNIKPILVFDGQHLPAKALTEQ-RRRESRQQSKKRAMELLRLGRT 112
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L II+KLDL+G ++ EK A+ ++ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAQKIIFKLDLNGAGLLVEAEKFHLAMGCTKERYRFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFMLKTEQDDMRIALKKIPQY 261
>gi|402080689|gb|EJT75834.1| exonuclease 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 813
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY +I+EDSDLLVFGAK+++ KLD G C ++R S ++ L +TDA+FR M I
Sbjct: 162 GYVSGIISEDSDLLVFGAKRLLTKLDQYGQCIEINRRDFCSVREISLTGWTDAEFRQMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
SGCDY G+ GMGLK A
Sbjct: 222 FSGCDYLDGLSGMGLKTA 239
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G C ++R S ++ L +TDA+FR M I SGCDY G+ GM
Sbjct: 175 LVFGAKRLLTKLDQYGQCIEINRRDFCSVREISLTGWTDAEFRQMAIFSGCDYLDGLSGM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|351707066|gb|EHB09985.1| Exonuclease 1 [Heterocephalus glaber]
Length = 838
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQSRLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE 291
MCILSGCDY + ++G+GL KA + +PD E
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLRLANNPDIE 251
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQSRLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD E ++KI Y K+
Sbjct: 241 VLRLANNPDIEKVIKKIGHYLKMN 264
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I++FDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILIFDGCTLPSKK 86
>gi|194758777|ref|XP_001961635.1| GF14831 [Drosophila ananassae]
gi|190615332|gb|EDV30856.1| GF14831 [Drosophila ananassae]
Length = 714
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A+++ITEDSDL +FGAKKII+KLDL+GN ++ KL A+ + KFR
Sbjct: 159 NKADIAEFIITEDSDLTLFGAKKIIFKLDLNGNGLLVEAHKLHLAMGCREENYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 251
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+ MLL++ IK I+VFDG+HLPAK TE+ RR+ + + K+KAAELL G
Sbjct: 54 VYIQYCLKYVQMLLSYDIKPILVFDGQHLPAKALTEK-RRRESRKQSKEKAAELLRRG 110
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L II+KLDL+GN ++ KL A+ + KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKKIIFKLDLNGNGLLVEAHKLHLAMGCREENYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKI 156
L KA ++ D AL+KI
Sbjct: 236 LAKACKFILKTEQEDMHIALKKI 258
>gi|125986267|ref|XP_001356897.1| GA10293 [Drosophila pseudoobscura pseudoobscura]
gi|54645223|gb|EAL33963.1| GA10293 [Drosophila pseudoobscura pseudoobscura]
Length = 709
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAKK+I+KLDL+G ++ +KL A+ AK+ KFR
Sbjct: 159 NKANIAQYIITEDSDLTLFGAKKVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFMLKTEQDDM 251
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YC+KYI MLL++ IK I+VFDG+HLPAK TE+ RR+ + + KQ+AAELL G
Sbjct: 55 YVQYCLKYIQMLLSYDIKPILVFDGQHLPAKALTEK-RRRESRQQSKQRAAELLRLG 110
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +I+KLDL+G ++ +KL A+ AK+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKKVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFMLKTEQDDMRIALKKIPSY 261
>gi|195148683|ref|XP_002015297.1| GL18496 [Drosophila persimilis]
gi|194107250|gb|EDW29293.1| GL18496 [Drosophila persimilis]
Length = 709
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAKK+I+KLDL+G ++ +KL A+ AK+ KFR
Sbjct: 159 NKANIAQYIITEDSDLTLFGAKKVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFMLKTEQDDM 251
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YC+KYI MLL++ IK I+VFDG+HLPAK TE+ RR+ + + KQ+AAELL G
Sbjct: 55 YVQYCLKYIQMLLSYDIKPILVFDGQHLPAKALTEK-RRRESRQQSKQRAAELLRLG 110
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +I+KLDL+G ++ +KL A+ AK+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKKVIFKLDLNGCGLLVEADKLYLAMGCTQAKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFMLKTEQDDMRIALKKIPSY 261
>gi|328862806|gb|EGG11906.1| hypothetical protein MELLADRAFT_41659 [Melampsora larici-populina
98AG31]
Length = 484
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
+ G+ D ++TEDSDLLV+GAK +++KLD G+C + R+ L+ +TD +FR
Sbjct: 159 ELHGHIDGILTEDSDLLVYGAKNVLFKLDPLGHCIHISRDDFGKVKDTQLSLWTDTEFRQ 218
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
M ILSGCDY I G+GLKKA
Sbjct: 219 MAILSGCDYLPSIHGLGLKKA 239
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L++ ++++KLD G+C + R+ L+ +TD +FR M ILSGCDY I G+
Sbjct: 175 LVYGAKNVLFKLDPLGHCIHISRDDFGKVKDTQLSLWTDTEFRQMAILSGCDYLPSIHGL 234
Query: 133 GLKKA 137
GLKKA
Sbjct: 235 GLKKA 239
>gi|195437805|ref|XP_002066830.1| GK24343 [Drosophila willistoni]
gi|194162915|gb|EDW77816.1| GK24343 [Drosophila willistoni]
Length = 701
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A Y++TEDSDL +FGAKK+I+KLDL+GN ++ +KL A+ ++ KFR
Sbjct: 159 NKAEIVQYIVTEDSDLTLFGAKKVIFKLDLTGNGLLVEADKLHLAMSCREDRYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 251
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
LYV YC+KY+ MLL++ IK ++VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 LYVQYCLKYVQMLLSYDIKPVLVFDGQHLPAKALTEKRRRENRQ-QSKKRAAELLRLG 110
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +I+KLDL+GN ++ +KL A+ ++ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKKVIFKLDLTGNGLLVEADKLHLAMSCREDRYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQEDMRKALKKIPQY 261
>gi|194880099|ref|XP_001974365.1| GG21694 [Drosophila erecta]
gi|190657552|gb|EDV54765.1| GG21694 [Drosophila erecta]
Length = 732
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 57/93 (61%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 159 NKVDVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCKEEKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQEDM 251
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 IYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRVSRKQSKERAAELLRLG 110
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCKEEKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQEDMRIALKKIPSY 261
>gi|358334576|dbj|GAA32605.2| exonuclease 1 [Clonorchis sinensis]
Length = 996
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 24/94 (25%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN-------------CCFMDREKLPSALK 244
N AGYAD VITEDSDLL+FG +++I+KLDL+G CC M
Sbjct: 159 NRAGYADLVITEDSDLLLFGCRQVIFKLDLTGAGVLVAVTAGIGELCCGMRPN------- 211
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+FTD+ RYM ILSGCDY++GI G+GL A
Sbjct: 212 ----QFTDSTLRYMGILSGCDYFSGIPGIGLATA 241
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 73 LLHSGSSIIYKLDLSGN-------------CCFMDREKLPSALKMPLAKFTDAKFRYMCI 119
LL +I+KLDL+G CC M + FTD+ RYM I
Sbjct: 175 LLFGCRQVIFKLDLTGAGVLVAVTAGIGELCCGMRPNQ-----------FTDSTLRYMGI 223
Query: 120 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIG 163
LSGCDY++GI G+GL A + DF L K+ +Y +
Sbjct: 224 LSGCDYFSGIPGIGLATAAKILRQTRLSDFRELLSKLGLYTNLS 267
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
YV Y +KY+ MLL IK I+VFDG LP+K TE +RK ++ +++KAAE L G+
Sbjct: 55 YVRYTLKYLEMLLTCNIKPILVFDGASLPSKADTEL-KRKESKESYRKKAAEYLLQGN 111
>gi|121705316|ref|XP_001270921.1| exonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119399067|gb|EAW09495.1| exonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 664
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +I+EDSDLLVFGAK+++ KLD G C ++R + ++ L +TDA FR MCI
Sbjct: 164 GIIDGIISEDSDLLVFGAKRLLSKLDQHGECIEINRADFTACREVSLIGWTDADFRRMCI 223
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I MGLK A
Sbjct: 224 LSGCDYLANIPRMGLKTA 241
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G C ++R + ++ L +TDA FR MCILSGCDY I M
Sbjct: 177 LVFGAKRLLSKLDQHGECIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLANIPRM 236
Query: 133 GLKKA 137
GLK A
Sbjct: 237 GLKTA 241
>gi|358385942|gb|EHK23538.1| hypothetical protein TRIVIDRAFT_37141, partial [Trichoderma virens
Gv29-8]
Length = 731
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ D +I++DSDLLVFGAK+++ KLD GNC ++R + ++ L ++DA+FR M I
Sbjct: 158 GFVDGIISDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAI 217
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY G+ G+GLK A
Sbjct: 218 MSGCDYLNGLPGVGLKTA 235
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R + ++ L ++DA+FR M I+SGCDY G+ G+
Sbjct: 171 LVFGAKRLLTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAIMSGCDYLNGLPGV 230
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK +I++ +LT
Sbjct: 231 GLKTAYRMLRKTKSP--ERIVRLLQFEGK-----RISENYLT 265
>gi|440904888|gb|ELR55344.1| Exonuclease 1 [Bos grunniens mutus]
Length = 833
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG VITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEV 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKLLRLANNPDI 250
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD +RKI Y K+
Sbjct: 241 LLRLANNPDILKVVRKIGHYLKMN 264
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK +NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|70999992|ref|XP_754713.1| exonuclease [Aspergillus fumigatus Af293]
gi|66852350|gb|EAL92675.1| exonuclease, putative [Aspergillus fumigatus Af293]
Length = 658
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C +DR + ++ L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDLLVFGAKRLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I MGLK A
Sbjct: 222 LSGCDYLPNIPRMGLKTA 239
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C +DR + ++ L +TDA FR MCILSGCDY I M
Sbjct: 175 LVFGAKRLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCILSGCDYLPNIPRM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A + + E ALR + G+
Sbjct: 235 GLKTAYRSIRKYK--NVEKALRMLQFDGQ 261
>gi|406701048|gb|EKD04204.1| hypothetical protein A1Q2_01501 [Trichosporon asahii var. asahii
CBS 8904]
Length = 743
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D +ITEDSDLLVFG K +++K+D GNC ++ R + + +P+ +TD +FR M +
Sbjct: 159 GYVDGIITEDSDLLVFGCKTVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAV 218
Query: 261 ------------LSGCDYWTGIKGMGLKKA 278
LSGCDY I G+GLKKA
Sbjct: 219 SSIVRMQANQQMLSGCDYLPSIVGIGLKKA 248
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 12/71 (16%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI------------LSGCDYW 126
++++K+D GNC ++ R + + +P+ +TD +FR M + LSGCDY
Sbjct: 178 TVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYL 237
Query: 127 TGIKGMGLKKA 137
I G+GLKKA
Sbjct: 238 PSIVGIGLKKA 248
>gi|119908266|ref|XP_582828.3| PREDICTED: exonuclease 1 [Bos taurus]
Length = 835
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG VITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEV 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKLLRLANNPDI 250
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD +RKI Y K+
Sbjct: 241 LLRLANNPDILKVVRKIGHYLKMN 264
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK +NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|401881918|gb|EJT46196.1| hypothetical protein A1Q1_05280 [Trichosporon asahii var. asahii
CBS 2479]
Length = 743
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D +ITEDSDLLVFG K +++K+D GNC ++ R + + +P+ +TD +FR M +
Sbjct: 159 GYVDGIITEDSDLLVFGCKTVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAV 218
Query: 261 ------------LSGCDYWTGIKGMGLKKA 278
LSGCDY I G+GLKKA
Sbjct: 219 SSIVRMQANQQMLSGCDYLPSIVGIGLKKA 248
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 12/71 (16%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI------------LSGCDYW 126
++++K+D GNC ++ R + + +P+ +TD +FR M + LSGCDY
Sbjct: 178 TVVFKMDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYL 237
Query: 127 TGIKGMGLKKA 137
I G+GLKKA
Sbjct: 238 PSIVGIGLKKA 248
>gi|297484026|ref|XP_002694001.1| PREDICTED: exonuclease 1 [Bos taurus]
gi|296479294|tpg|DAA21409.1| TPA: exonuclease 1 [Bos taurus]
Length = 835
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG VITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEV 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKLLRLANNPDI 250
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD +RKI Y K+
Sbjct: 241 LLRLANNPDILKVVRKIGHYLKMN 264
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK +NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|346976689|gb|EGY20141.1| exodeoxyribonuclease [Verticillium dahliae VdLs.17]
Length = 805
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +++EDSDLLVFG K+++ KLD GNC ++R + ++ L +TDA+FR M I
Sbjct: 162 GIIDGILSEDSDLLVFGCKRLLTKLDQYGNCIEINRRDFAACREISLTGWTDAEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY G+ MGLK A
Sbjct: 222 LSGCDYLAGVSNMGLKTA 239
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD GNC ++R + ++ L +TDA+FR M ILSGCDY G+ MGLK A
Sbjct: 182 LLTKLDQYGNCIEINRRDFAACREISLTGWTDAEFRRMAILSGCDYLAGVSNMGLKTA 239
>gi|159127722|gb|EDP52837.1| exonuclease, putative [Aspergillus fumigatus A1163]
Length = 658
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C +DR + ++ L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDLLVFGAKRLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I MGLK A
Sbjct: 222 LSGCDYLPNIPRMGLKTA 239
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C +DR + ++ L +TDA FR MCILSGCDY I M
Sbjct: 175 LVFGAKRLLSKLDQHGDCIEIDRADFAACREVNLIGWTDADFRRMCILSGCDYLPNIPRM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A + + E ALR + G+
Sbjct: 235 GLKTAYRSIRKYK--NVEKALRMLQFDGQ 261
>gi|134108762|ref|XP_777034.1| hypothetical protein CNBB5600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259717|gb|EAL22387.1| hypothetical protein CNBB5600 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 201 GYADYVITEDSDLLVFGAKK---IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
GY D +ITEDSDLLVFG KK +I+KLD G C ++ R++L + P+ +TD FR
Sbjct: 162 GYVDGIITEDSDLLVFGCKKASRVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRR 221
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
M +LSGCDY I G+G+K A
Sbjct: 222 MAMLSGCDYLDSIPGIGIKTA 242
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S +I+KLD G C ++ R++L + P+ +TD FR M +LSGCDY I G+G+K A
Sbjct: 183 SRVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRMAMLSGCDYLDSIPGIGIKTA 242
>gi|321252528|ref|XP_003192437.1| exonuclease [Cryptococcus gattii WM276]
gi|317458905|gb|ADV20650.1| Exonuclease, putative [Cryptococcus gattii WM276]
Length = 1015
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 201 GYADYVITEDSDLLVFG---AKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
GY D +ITEDSDLLVFG A ++I+KLD G C ++ R++L + P+ +TD FR
Sbjct: 162 GYVDGIITEDSDLLVFGCKRASRVIFKLDKDGQCVWIHRDRLAKVREFPMHGWTDMHFRR 221
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
M +LSGCDY I G+G+K A
Sbjct: 222 MAMLSGCDYLDSIPGIGIKTA 242
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S +I+KLD G C ++ R++L + P+ +TD FR M +LSGCDY I G+G+K A
Sbjct: 183 SRVIFKLDKDGQCVWIHRDRLAKVREFPMHGWTDMHFRRMAMLSGCDYLDSIPGIGIKTA 242
Query: 138 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+R+ N K+ ++++ +L
Sbjct: 243 ------------HRLMRRFNSVEKLLQHIRLEGTYL 266
>gi|426239609|ref|XP_004013712.1| PREDICTED: exonuclease 1 [Ovis aries]
Length = 835
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG VITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEV 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKLLRLANNPDI 250
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD +RKI Y K+
Sbjct: 241 LLRLANNPDILKVIRKIGHYLKMN 264
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|329666203|pdb|3QEA|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (Wt) In
Complex With Dna (Complex Ii)
gi|329666206|pdb|3QEB|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (Wt) In
Complex With Dna And Mn2+ (Complex Iii)
Length = 352
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + +
Sbjct: 172 SDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+G+GL KA + +PD + V KIG Y+K+
Sbjct: 231 RGIGLAKACKVLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|405966070|gb|EKC31392.1| Exonuclease 1 [Crassostrea gigas]
Length = 657
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 21/123 (17%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G A +ITEDSDLL+FG K+I+K+D GN +++ +L +++ +T KFRY
Sbjct: 159 NKCGIAQLIITEDSDLLLFGCDKVIFKMDHFGNGVLIEQSRLNEVMEIQSGFYTFEKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKW 317
MCILSGCDY + ++G+GL KA AKVF ++K+P K
Sbjct: 219 MCILSGCDYLSSLQGIGLGKA---------------------AKVFKRARQSELKLPPKA 257
Query: 318 YRR 320
++
Sbjct: 258 SKK 260
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMKY+ MLL +K ++VFDG HLP+K+ E+ RR++ EI +K+KAA+LL G
Sbjct: 55 YVYYCMKYVEMLLKKNLKPVLVFDGCHLPSKKDVEKSRREKREI-NKKKAAQLLREG 110
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
LL +I+K+D GN +++ +L +++ +T KFRYMCILSGCDY + ++G+
Sbjct: 175 LLFGCDKVIFKMDHFGNGVLIEQSRLNEVMEIQSGFYTFEKFRYMCILSGCDYLSSLQGI 234
Query: 133 GLKKA 137
GL KA
Sbjct: 235 GLGKA 239
>gi|350589314|ref|XP_003130603.3| PREDICTED: exonuclease 1 [Sus scrofa]
Length = 836
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEVDQARLGKCKQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARLGKCKQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|348535099|ref|XP_003455039.1| PREDICTED: exonuclease 1-like [Oreochromis niloticus]
Length = 776
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
+G A VITEDSDLL FG KK+I K+D GN +D+ L + FT+ KFRYMC
Sbjct: 161 SGLAQAVITEDSDLLAFGCKKVILKMDKQGNGLEIDQSNLGRCRSLGNV-FTEEKFRYMC 219
Query: 260 ILSGCDYWTGIKGMGLKKAKDYVFSIMDPD----FENRKEYVKYAKVFP 304
ILSGCDY + G+GL KA + DPD +Y+K + V P
Sbjct: 220 ILSGCDYLASLHGIGLGKACKLLQLAKDPDILRVIRKMGQYLKMSLVVP 268
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMK+++MLL +K I+VFDGR+LP+K+ E+ RR+R E + QK +LL G
Sbjct: 55 YVWYCMKFVDMLLTFSVKPILVFDGRNLPSKQEVEKARRERRET-NLQKGRQLLREG 110
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ L + FT+ KFRYMCILSGCDY + G+GL KA
Sbjct: 182 VILKMDKQGNGLEIDQSNLGRCRSLGNV-FTEEKFRYMCILSGCDYLASLHGIGLGKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKI 162
+ DPD +RK+ Y K+
Sbjct: 241 LLQLAKDPDILRVIRKMGQYLKM 263
>gi|431891721|gb|ELK02292.1| Exonuclease 1 [Pteropus alecto]
Length = 816
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+++
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLRMN 264
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|444708439|gb|ELW49502.1| Exonuclease 1 [Tupaia chinensis]
Length = 799
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD I V KIG Y+K+
Sbjct: 241 VLRLANNPDI------IKVIKKIGHYLKMN 264
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVESSRRERRQA-NLLKGKQLLREG 110
>gi|391339522|ref|XP_003744097.1| PREDICTED: exonuclease 1-like [Metaseiulus occidentalis]
Length = 516
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFR 256
N+ GY D +++EDSDLL+FG ++++YK+D++G +++ K+P L FT KFR
Sbjct: 159 NLNGYVDLIVSEDSDLLLFGCERVLYKMDVNGYGTLVEKSKIPQCLGSGGTTHFTHDKFR 218
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
+ CILSGCDY + G+GLKK ++ + D
Sbjct: 219 WACILSGCDYLENLPGIGLKKTLKFLKPTSNTD 251
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMCILSGCDYWTGIKG 131
LL ++YK+D++G +++ K+P L FT KFR+ CILSGCDY + G
Sbjct: 175 LLFGCERVLYKMDVNGYGTLVEKSKIPQCLGSGGTTHFTHDKFRWACILSGCDYLENLPG 234
Query: 132 MGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+GLKK ++ + D + LRK+ Y K+ S V +T +++
Sbjct: 235 IGLKKTLKFLKPTSNTDPYSLLRKMPNYLKMPS-VTVTDDYI 275
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQ--KAAELLHSG 77
L++ +CMK IN L A+ ++ ++VFDG+ LP+K T +KRAE + + KA L G
Sbjct: 54 LHIKFCMKMINALQANGVRPVVVFDGKSLPSKADT---NKKRAESKKENLTKAKMLFAEG 110
Query: 78 SSIIYK 83
++ K
Sbjct: 111 KTLEAK 116
>gi|260801469|ref|XP_002595618.1| hypothetical protein BRAFLDRAFT_64728 [Branchiostoma floridae]
gi|229280865|gb|EEN51630.1| hypothetical protein BRAFLDRAFT_64728 [Branchiostoma floridae]
Length = 275
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
+++G ADYVITEDSDLLV+GAKK+IYK D + S P +FT KF++
Sbjct: 160 SMSGAADYVITEDSDLLVYGAKKVIYKWDGHDGQLILHHHLYRSYPDFP--QFTFEKFQH 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENR 293
MCI+SGCDY I+ +GLK+A +V S+ D D F+ R
Sbjct: 218 MCIISGCDYLGSIESIGLKRAATFVKSVGDGDIFKTR 254
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L++ +IYK D + S P +FT KF++MCI+SGCDY I+ +
Sbjct: 176 LVYGAKKVIYKWDGHDGQLILHHHLYRSYPDFP--QFTFEKFQHMCIISGCDYLGSIESI 233
Query: 133 GLKKAKDYVFSIMDPD-FENALRK 155
GLK+A +V S+ D D F+ L K
Sbjct: 234 GLKRAATFVKSVGDGDIFKTRLTK 257
>gi|410985751|ref|XP_003999180.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1 [Felis catus]
Length = 846
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|348577145|ref|XP_003474345.1| PREDICTED: exonuclease 1-like [Cavia porcellus]
Length = 839
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQTRLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQTRLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|359320017|ref|XP_003639234.1| PREDICTED: exonuclease 1-like [Canis lupus familiaris]
Length = 836
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK +++FDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPVLIFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|297661539|ref|XP_002809295.1| PREDICTED: exonuclease 1 [Pongo abelii]
Length = 846
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|296804836|ref|XP_002843266.1| exodeoxyribonuclease 1 [Arthroderma otae CBS 113480]
gi|238845868|gb|EEQ35530.1| exodeoxyribonuclease 1 [Arthroderma otae CBS 113480]
Length = 729
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD +G+C ++R + + L +TD FR+MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKNGDCIEINRGDFAACRDISLIGWTDENFRHMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY T I MGLK A
Sbjct: 222 LSGCDYLTNIPRMGLKTA 239
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD +G+C ++R + + L +TD FR+MCILSGCDY T I M
Sbjct: 175 LVFGAKRLLSKLDKNGDCIEINRGDFAACRDISLIGWTDENFRHMCILSGCDYLTNIPRM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|426334339|ref|XP_004028711.1| PREDICTED: exonuclease 1 isoform 1 [Gorilla gorilla gorilla]
gi|426334341|ref|XP_004028712.1| PREDICTED: exonuclease 1 isoform 2 [Gorilla gorilla gorilla]
Length = 846
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|332236488|ref|XP_003267433.1| PREDICTED: exonuclease 1 [Nomascus leucogenys]
Length = 817
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 130 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRY 188
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 189 MCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 221
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 153 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 211
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 212 VLRLANNPDI------VKVIKKIGHYLKMN 235
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 26 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 57
>gi|410354891|gb|JAA44049.1| exonuclease 1 [Pan troglodytes]
gi|410354893|gb|JAA44050.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|410220862|gb|JAA07650.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|3513573|gb|AAC33874.1| exonuclease I [Homo sapiens]
Length = 800
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|114573428|ref|XP_001160902.1| PREDICTED: exonuclease 1 isoform 2 [Pan troglodytes]
gi|114573430|ref|XP_001160941.1| PREDICTED: exonuclease 1 isoform 3 [Pan troglodytes]
gi|410251950|gb|JAA13942.1| exonuclease 1 [Pan troglodytes]
gi|410251952|gb|JAA13943.1| exonuclease 1 [Pan troglodytes]
gi|410297546|gb|JAA27373.1| exonuclease 1 [Pan troglodytes]
Length = 846
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|344278553|ref|XP_003411058.1| PREDICTED: exonuclease 1 [Loxodonta africana]
Length = 927
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 212 AARSQGVDCLVAPYEADAQLAYLNRAGIVQAIITEDSDLLAFGCKKVILKMDQLGNGLEI 271
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 272 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKLLRLANNPDI 326
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 258 VILKMDQLGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 316
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 317 LLRLANNPDI------VKVIKKIGHYLKMN 340
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 131 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 162
>gi|119590512|gb|EAW70106.1| exonuclease 1, isoform CRA_c [Homo sapiens]
Length = 803
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPD 249
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|4249655|gb|AAD13754.1| exonuclease I [Homo sapiens]
Length = 846
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|158256018|dbj|BAF83980.1| unnamed protein product [Homo sapiens]
Length = 845
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|31560511|ref|NP_036142.2| exonuclease 1 [Mus musculus]
gi|85700955|sp|Q9QZ11.2|EXO1_MOUSE RecName: Full=Exonuclease 1; Short=mExo1; AltName: Full=Exonuclease
I
gi|13879382|gb|AAH06671.1| Exonuclease 1 [Mus musculus]
gi|26324664|dbj|BAC26086.1| unnamed protein product [Mus musculus]
gi|148681255|gb|EDL13202.1| exonuclease 1 [Mus musculus]
Length = 837
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L K FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLASLRGIGLAKACKVLRLANNPDI 250
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+ +PD ++KI Y ++ + + ++++T
Sbjct: 241 VLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYIT 273
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL++ +K I++FDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSYGVKPILIFDGCTLPSKK 86
>gi|119590509|gb|EAW70103.1| exonuclease 1, isoform CRA_a [Homo sapiens]
gi|119590511|gb|EAW70105.1| exonuclease 1, isoform CRA_a [Homo sapiens]
Length = 846
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|284055278|ref|NP_006018.4| exonuclease 1 isoform b [Homo sapiens]
gi|284172361|ref|NP_569082.2| exonuclease 1 isoform b [Homo sapiens]
gi|85700954|sp|Q9UQ84.2|EXO1_HUMAN RecName: Full=Exonuclease 1; Short=hExo1; AltName: Full=Exonuclease
I; Short=hExoI
Length = 846
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPD 249
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|397508251|ref|XP_003824575.1| PREDICTED: exonuclease 1 isoform 1 [Pan paniscus]
gi|397508253|ref|XP_003824576.1| PREDICTED: exonuclease 1 isoform 2 [Pan paniscus]
Length = 846
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|284055276|ref|NP_003677.4| exonuclease 1 isoform a [Homo sapiens]
Length = 803
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPD 249
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|5689874|emb|CAB51863.1| exonuclease 1 homologue [Mus musculus]
Length = 837
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L K FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLASLRGIGLAKACKVLRLANNPDI 250
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+ +PD ++KI Y ++ + + ++++T
Sbjct: 241 VLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYIT 273
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL++ +K I++FDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSYGVKPILIFDGCTLPSKK 86
>gi|3445182|gb|AAC32424.1| Hex1 [Homo sapiens]
gi|3822434|gb|AAC69880.1| exonuclease Ia [Homo sapiens]
Length = 803
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPD 249
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|3170238|gb|AAC32259.1| Hex1 [Homo sapiens]
gi|3703096|gb|AAC63043.1| exonuclease 1a [Homo sapiens]
Length = 803
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPD 249
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|13960099|gb|AAH07491.1| Exonuclease 1 [Homo sapiens]
gi|123991816|gb|ABM83958.1| exonuclease 1 [synthetic construct]
gi|157928518|gb|ABW03555.1| exonuclease 1 [synthetic construct]
gi|307684586|dbj|BAJ20333.1| exonuclease 1 [synthetic construct]
Length = 846
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|126306967|ref|XP_001368520.1| PREDICTED: exonuclease 1 [Monodelphis domestica]
Length = 838
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G D +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKTGIVDAIITEDSDLLAFGCKKVILKMDKLGNGLEIDQARLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + + G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLHGIGLAKACKLLKIANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + + G+GL KA
Sbjct: 182 VILKMDKLGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD I V KIG Y+K+
Sbjct: 241 LLKIANNPDI------IKVIKKIGHYLKMN 264
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK+++MLL++ IK ++VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVAFCMKFVSMLLSYGIKPVLVFDGCTLPSKKEVEKARRERRQT-NLLKGKQLLREG 110
>gi|354475343|ref|XP_003499889.1| PREDICTED: exonuclease 1 [Cricetulus griseus]
Length = 841
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLKLANNPD 249
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+ +PD ++KI Y K+ + + ++++T
Sbjct: 241 VLKLANNPDIVKVIKKIGQYLKMN--ITVPEDYIT 273
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H +K I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGVKPILVFDGCTLPSKK 86
>gi|74151267|dbj|BAE38768.1| unnamed protein product [Mus musculus]
Length = 837
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L K FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLASLRGIGLAKACKVLRLANNPDI 250
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+ +PD ++KI Y ++ + + ++++T
Sbjct: 241 VLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYIT 273
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL++ +K I++FDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSYGVKPILIFDGCTLPSKK 86
>gi|403288380|ref|XP_003935384.1| PREDICTED: exonuclease 1 [Saimiri boliviensis boliviensis]
Length = 847
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEV 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLKLANNPDI 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLKLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|3822433|gb|AAC69879.1| exonuclease Ib [Homo sapiens]
gi|23664448|gb|AAN39382.1| exonuclease 1 [Homo sapiens]
Length = 846
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|119590510|gb|EAW70104.1| exonuclease 1, isoform CRA_b [Homo sapiens]
Length = 763
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 96 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 155
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 156 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 210
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 142 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 200
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 201 VLRLANNPDI------VKVIKKIGHYLKMN 224
>gi|149748996|ref|XP_001491533.1| PREDICTED: exonuclease 1 [Equus caballus]
Length = 835
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDHFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLKLANNPDI 250
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDHFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V K+G Y+K+
Sbjct: 241 VLKLANNPDI------VKVIKKMGHYLKMN 264
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK+++MLL+H +K I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVHMLLSHGVKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|170030670|ref|XP_001843211.1| exonuclease [Culex quinquefasciatus]
gi|167867887|gb|EDS31270.1| exonuclease [Culex quinquefasciatus]
Length = 792
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G A VITEDSDL++FG K+++KLDL+G+ ++REKL A+ KFT KFRY
Sbjct: 159 NKKGIAQVVITEDSDLMLFGCSKVLFKLDLTGSGLLIEREKLAVAMGCKEEKFTFDKFRY 218
Query: 258 MCILSGCDYWTGIKGMGLK 276
MCILSG WT +G+G +
Sbjct: 219 MCILSGVIIWTRFRGLGCQ 237
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+++ YC+K++N+LLA++IK I+VFDGRHLPAK TE RR+ + K++AAELL G
Sbjct: 54 VHIQYCLKFVNLLLANEIKPILVFDGRHLPAKAGTEAKRRESRD-SSKKRAAELLRMG 110
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
+L S +++KLDL+G+ ++REKL A+ KFT KFRYMCILSG WT +G+
Sbjct: 175 MLFGCSKVLFKLDLTGSGLLIEREKLAVAMGCKEEKFTFDKFRYMCILSGVIIWTRFRGL 234
Query: 133 GLK 135
G +
Sbjct: 235 GCQ 237
>gi|157821351|ref|NP_001100668.1| exonuclease 1 [Rattus norvegicus]
gi|149040819|gb|EDL94776.1| exonuclease 1 (predicted) [Rattus norvegicus]
Length = 836
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L K FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLASLRGIGLAKACKVLRLANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLASLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+ +PD ++KI Y K+ + + ++++T
Sbjct: 241 VLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIT 273
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL++ +K I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSYGVKPILVFDGCTLPSKK 86
>gi|402858507|ref|XP_003893743.1| PREDICTED: exonuclease 1 isoform 1 [Papio anubis]
gi|402858509|ref|XP_003893744.1| PREDICTED: exonuclease 1 isoform 2 [Papio anubis]
Length = 846
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|302498525|ref|XP_003011260.1| exonuclease, putative [Arthroderma benhamiae CBS 112371]
gi|291174809|gb|EFE30620.1| exonuclease, putative [Arthroderma benhamiae CBS 112371]
Length = 661
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD +G+C ++R + + + +TD FR+MCI
Sbjct: 98 GIINGIISEDSDMLVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCI 157
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY T I MGLK A
Sbjct: 158 LSGCDYLTNIPKMGLKTA 175
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD +G+C ++R + + + +TD FR+MCILSGCDY T I M
Sbjct: 111 LVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKM 170
Query: 133 GLKKA 137
GLK A
Sbjct: 171 GLKTA 175
>gi|296230855|ref|XP_002760913.1| PREDICTED: exonuclease 1 [Callithrix jacchus]
Length = 852
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLKLANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLKLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|301766172|ref|XP_002918504.1| PREDICTED: exonuclease 1-like [Ailuropoda melanoleuca]
gi|281346532|gb|EFB22116.1| hypothetical protein PANDA_006967 [Ailuropoda melanoleuca]
Length = 842
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG ++TEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIVTEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLASNPDI 250
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLASNPDI------VKVIKKIGHYLKMN 264
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I++FDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILIFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|449278115|gb|EMC86082.1| Exonuclease 1 [Columba livia]
Length = 808
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+ K+D GN +DR +L + ++ FT+ KFRY
Sbjct: 159 NKTGMVQAIITEDSDLLAFGCKKVFLKIDKFGNGLEIDRARLGNCKQLGNV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + I G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSIHGIGLAKACKLLKIANNPDI 250
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ K+D GN +DR +L + ++ FT+ KFRYMCILSGCDY + I G+GL KA
Sbjct: 182 VFLKIDKFGNGLEIDRARLGNCKQLGNV-FTEEKFRYMCILSGCDYLSSIHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD I V K+G Y+K+
Sbjct: 241 LLKIANNPDI------IKVIKKMGQYLKMN 264
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
LY+ +CMK ++MLL+ IK I+VFDG LP+K+ E+ RR++ + K +LL G
Sbjct: 54 LYIAFCMKLVDMLLSFGIKPILVFDGCTLPSKKEVEKARREKRQASL-LKGKQLLQEG 110
>gi|119492135|ref|XP_001263538.1| exonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119411698|gb|EAW21641.1| exonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 658
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + ++ L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDLLVFGAKRLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I MGLK A
Sbjct: 222 LSGCDYLPNIPRMGLKTA 239
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I M
Sbjct: 175 LVFGAKRLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLPNIPRM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A + + E ALR + G+
Sbjct: 235 GLKTAYRSIRKYK--NVEKALRMLQFDGQ 261
>gi|383422759|gb|AFH34593.1| exonuclease 1 isoform b [Macaca mulatta]
Length = 846
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|355746262|gb|EHH50887.1| hypothetical protein EGM_01782 [Macaca fascicularis]
Length = 846
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIEQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|327306443|ref|XP_003237913.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326460911|gb|EGD86364.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 725
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD +G+C ++R + + + +TD FR+MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY T I MGLK A
Sbjct: 222 LSGCDYLTNIPKMGLKTA 239
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD +G+C ++R + + + +TD FR+MCILSGCDY T I M
Sbjct: 175 LVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|302658050|ref|XP_003020735.1| exonuclease, putative [Trichophyton verrucosum HKI 0517]
gi|291184593|gb|EFE40117.1| exonuclease, putative [Trichophyton verrucosum HKI 0517]
Length = 725
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD +G+C ++R + + + +TD FR+MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY T I MGLK A
Sbjct: 222 LSGCDYLTNIPKMGLKTA 239
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD +G+C ++R + + + +TD FR+MCILSGCDY T I M
Sbjct: 175 LVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLTNIPKM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|295668435|ref|XP_002794766.1| DNA damage-inducible protein DIN7 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285459|gb|EEH41025.1| DNA damage-inducible protein DIN7 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 827
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +I+EDSD+LVFGAK+++ KLD G+C ++R + + L +TDA+FR MCI
Sbjct: 103 GIIDGIISEDSDMLVFGAKRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCI 162
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 163 LSGCDYLDNLPRMGLKTA 180
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L +TDA+FR MCILSGCDY + M
Sbjct: 116 LVFGAKRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRM 175
Query: 133 GLKKA 137
GLK A
Sbjct: 176 GLKTA 180
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 26 MKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
M + MLL I +VFDG +LP+K TE R KR E K+ EL H+G
Sbjct: 1 MNRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRRE-ESKRLGLELFHAG 51
>gi|225678637|gb|EEH16921.1| exodeoxyribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 701
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +I+EDSD+LVFGAK+++ KLD G+C ++R + + L +TDA+FR MCI
Sbjct: 162 GIIDGIISEDSDMLVFGAKRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLDNLPRMGLKTA 239
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L +TDA+FR MCILSGCDY + M
Sbjct: 175 LVFGAKRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL I +VFDG +LP+K TE R KR E K+ EL H+G
Sbjct: 55 YVDFAMNRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRRE-ESKRLGLELFHAG 110
>gi|109019828|ref|XP_001093427.1| PREDICTED: exonuclease 1 isoform 2 [Macaca mulatta]
Length = 846
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|226295014|gb|EEH50434.1| exonuclease [Paracoccidioides brasiliensis Pb18]
Length = 879
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +I+EDSD+LVFGAK+++ KLD G+C ++R + + L +TDA+FR MCI
Sbjct: 162 GIIDGIISEDSDMLVFGAKRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLDNLPRMGLKTA 239
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L +TDA+FR MCILSGCDY + M
Sbjct: 175 LVFGAKRLLSKLDKHGDCVEINRSDFTACQDISLIGWTDAEFRAMCILSGCDYLDNLPRM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL I +VFDG +LP+K TE R KR E K+ EL H+G
Sbjct: 55 YVDFAMNRVRMLLHFGINPYLVFDGDNLPSKAGTESSRAKRRE-ESKRLGLELFHAG 110
>gi|344249656|gb|EGW05760.1| Exonuclease 1 [Cricetulus griseus]
Length = 878
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLKLANNPDI 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEVDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+ +PD ++KI Y K+ + + ++++T
Sbjct: 241 VLKLANNPDIVKVIKKIGQYLKMN--ITVPEDYIT 273
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H +K I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGVKPILVFDGCTLPSKK 86
>gi|395855341|ref|XP_003800124.1| PREDICTED: exonuclease 1 [Otolemur garnettii]
Length = 835
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L K FT+ KFRY
Sbjct: 159 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARL-GMCKQLGDMFTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLPSLRGIGLAKACKVLRLANNPD 249
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARL-GMCKQLGDMFTEEKFRYMCILSGCDYLPSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL++ IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFLNMLLSNGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>gi|291402134|ref|XP_002717387.1| PREDICTED: exonuclease 1 [Oryctolagus cuniculus]
Length = 831
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N G +ITEDSDLL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKVGIVQAIITEDSDLLAFGCKKVILKMDQYGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQYGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK ++VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPVLVFDGCTLPSKK 86
>gi|355559130|gb|EHH15910.1| hypothetical protein EGK_02078 [Macaca mulatta]
Length = 943
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVKAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 182 VILKMDQFGNGLEIDQARLGMCRQLGDI-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 241 VLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAK 51
YV +CMK++NMLL+H IK I+VFDG LP+K
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSK 85
>gi|391873267|gb|EIT82320.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 682
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + ++ L +TDA FR MCI
Sbjct: 98 GIINGIISEDSDLLVFGAKRLLSKLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCI 157
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 158 LSGCDYLPNIARLGLKTA 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +
Sbjct: 111 LVFGAKRLLSKLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCILSGCDYLPNIARL 170
Query: 133 GLKKA 137
GLK A
Sbjct: 171 GLKTA 175
>gi|380483134|emb|CCF40805.1| hypothetical protein CH063_02433 [Colletotrichum higginsianum]
Length = 745
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+++EDSDLLVFG K+++ KLD GNC ++R + ++ L +TDA FR+M ILSGCD
Sbjct: 108 ILSEDSDLLVFGCKRLLTKLDQYGNCIEINRRDFCAVREVSLTGWTDADFRHMAILSGCD 167
Query: 266 YWTGIKGMGLKKA 278
Y GI MGLK A
Sbjct: 168 YLEGISNMGLKTA 180
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD GNC ++R + ++ L +TDA FR+M ILSGCDY GI MGLK A
Sbjct: 123 LLTKLDQYGNCIEINRRDFCAVREVSLTGWTDADFRHMAILSGCDYLEGISNMGLKTAYR 182
Query: 140 YVFSIMDPDFENALRKINVYGK 161
+ P E +R I GK
Sbjct: 183 MIRKYKTP--ERLVRMIQFEGK 202
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 26 MKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
M + ML + +VFDG LP+K ATE R KR E K+ A ELL +G
Sbjct: 1 MHRVRMLKHFGVTPYLVFDGDFLPSKAATEGSRAKRRE-ESKKSAIELLKAG 51
>gi|322708110|gb|EFY99687.1| exonuclease, putative [Metarhizium anisopliae ARSEF 23]
Length = 751
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I++DSDLLVFGAK+++ KLD GNC ++R + ++ L +TDA FR M I
Sbjct: 162 GLVNGIISDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY G+ G+GLK A
Sbjct: 222 MSGCDYLNGLPGVGLKTA 239
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R + ++ L +TDA FR M I+SGCDY G+ G+
Sbjct: 175 LVFGAKRLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLNGLPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E A+R + GK +I++ +LT
Sbjct: 235 GLKTAYRMLRKSKSP--EAAVRLLQFDGK-----RISENYLT 269
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
YVN M + ML + MVFDG LP+K ATE+ R KR E K+ A +LL +G +
Sbjct: 55 YVNAAMHRVRMLQHFGVTPYMVFDGDFLPSKAATEDSRAKRRE-EKKKLANDLLKAGKT 112
>gi|403375999|gb|EJY87977.1| Exonuclease 1 [Oxytricha trifallax]
Length = 835
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
+ G A +ITEDSDLL+FG KK+++K+D +GN +D E L ++ KF
Sbjct: 160 LKGKAQVIITEDSDLLIFGVKKVLFKMDKAGNGIEIDLENLNDVTELNFTKFNQDMLLTC 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
CILSGCDY IKG+G KKA V+ D
Sbjct: 220 CILSGCDYLESIKGIGFKKAHKLVYDEGD 248
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+++K+D +GN +D E L ++ KF CILSGCDY IKG+G KKA
Sbjct: 182 VLFKMDKAGNGIEIDLENLNDVTELNFTKFNQDMLLTCCILSGCDYLESIKGIGFKKAHK 241
Query: 140 YVFSIMDPDFENALRKINVYGKI 162
V+ D + + L+++ GK+
Sbjct: 242 LVYDEGD-NVQGILKRVRREGKM 263
>gi|291241252|ref|XP_002740527.1| PREDICTED: exonuclease 1-like [Saccoglossus kowalevskii]
Length = 885
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G A VITEDSDL+ FG K++ K+DL+GN +D+ KL +KM +K++ KFRY
Sbjct: 159 NRVGIAQCVITEDSDLVAFGCDKVMVKMDLNGNGLEIDKSKLNKIMKMG-SKYSFDKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCI SGCDY + +GLKKA +PD
Sbjct: 218 MCIASGCDYLASLPNIGLKKACKIFQLATNPDL 250
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ K+DL+GN +D+ KL +KM +K++ KFRYMCI SGCDY + +GLKKA
Sbjct: 182 VMVKMDLNGNGLEIDKSKLNKIMKMG-SKYSFDKFRYMCIASGCDYLASLPNIGLKKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGK 161
+PD + L++ Y K
Sbjct: 241 IFQLATNPDLTHVLKRFGHYLK 262
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV Y +K++NMLL+ +K I+VFDG +LP+KE+ E+ RR+R + + K + L G
Sbjct: 55 YVRYVLKFVNMLLSMNVKPILVFDGCNLPSKESVEKSRRERRQT-YLAKGKQFLREG 110
>gi|169767642|ref|XP_001818292.1| exonuclease [Aspergillus oryzae RIB40]
gi|83766147|dbj|BAE56290.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 746
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + ++ L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDLLVFGAKRLLSKLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 222 LSGCDYLPNIARLGLKTA 239
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +
Sbjct: 175 LVFGAKRLLSKLDQHGDCIEINRADFAACREVSLIGWTDADFRRMCILSGCDYLPNIARL 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|321462066|gb|EFX73092.1| hypothetical protein DAPPUDRAFT_110118 [Daphnia pulex]
Length = 283
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I G A +ITEDSDLL FG +I++K+D +G ++++KL +L F D KFR M
Sbjct: 109 IQGIAHLIITEDSDLLAFGCPRILFKMDQAGTGVLIEKDKLFLSLGGQAEFFNDEKFRRM 168
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFEN 292
CILSGCDY +KG+GL +A + D D +
Sbjct: 169 CILSGCDYLPSLKGIGLARAFKFFSGSTDSDLNS 202
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
YV YC+K++NMLL+H IK I+VFDG+ LP+K TE RR+ E R+K +A E L G++
Sbjct: 4 YVTYCVKFVNMLLSHDIKPILVFDGQPLPSKLGTELKRRENRE-RNKIQAREYLRQGNN 61
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G I++K+D +G ++++KL +L F D KFR MCILSGCDY +
Sbjct: 121 SDLLAFGCPRILFKMDQAGTGVLIEKDKLFLSLGGQAEFFNDEKFRRMCILSGCDYLPSL 180
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKI 156
KG+GL +A + D D + L K+
Sbjct: 181 KGIGLARAFKFFSGSTDSDLNSLLCKV 207
>gi|238484551|ref|XP_002373514.1| exonuclease, putative [Aspergillus flavus NRRL3357]
gi|220701564|gb|EED57902.1| exonuclease, putative [Aspergillus flavus NRRL3357]
Length = 746
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + ++ L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDLLVFGAKRLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 222 LSGCDYLPNIARLGLKTA 239
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +
Sbjct: 175 LVFGAKRLLSKLDQHGDCIEINRADFTACREVSLIGWTDADFRRMCILSGCDYLPNIARL 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A + + E ALR + G+
Sbjct: 235 GLKTAYRCIRKYR--NVEKALRMLQFEGQ 261
>gi|322694691|gb|EFY86514.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 751
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I++DSDLLVFGAK+++ KLD GNC ++R + ++ L +TDA FR M I
Sbjct: 162 GLVNGIISDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY G+ G+GLK A
Sbjct: 222 MSGCDYLDGLPGVGLKTA 239
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R + ++ L +TDA FR M I+SGCDY G+ G+
Sbjct: 175 LVFGAKRLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLDGLPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK +I++ +LT
Sbjct: 235 GLKTAYRMLRKSKSP--ERVVRLLQFNGK-----RISENYLT 269
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
YVN M + ML I MVFDG +LP+K ATE R KR E K+ A +LL +G +
Sbjct: 55 YVNAAMHRVRMLQHFGITPYMVFDGDYLPSKAATENSRAKRRE-EKKKLANDLLKAGKT 112
>gi|432106297|gb|ELK32183.1| Exonuclease 1 [Myotis davidii]
Length = 942
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG ++TEDSDLL FG KK+I K+D GN +D+ +L K FT+ KFRY
Sbjct: 143 NKAGIVQAIVTEDSDLLAFGCKKVILKMDQFGNGLEIDQARL-GMCKQLGDVFTEEKFRY 201
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 202 MCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 234
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L K FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 166 VILKMDQFGNGLEIDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 224
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V K+G Y+K+
Sbjct: 225 VLRLANNPDI------VKVIKKLGHYLKMN 248
>gi|425781231|gb|EKV19207.1| Exonuclease, putative [Penicillium digitatum PHI26]
gi|425783409|gb|EKV21262.1| Exonuclease, putative [Penicillium digitatum Pd1]
Length = 673
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+I+EDSDLLVFGAK++I KLD G C ++R + ++ L F+D FR MCILSGCD
Sbjct: 103 IISEDSDLLVFGAKRLISKLDQHGECIEINRADFTACREVNLVGFSDPDFRNMCILSGCD 162
Query: 266 YWTGIKGMGLKKA 278
Y I +GLK A
Sbjct: 163 YLANIPKLGLKTA 175
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ +I KLD G C ++R + ++ L F+D FR MCILSGCDY I +
Sbjct: 111 LVFGAKRLISKLDQHGECIEINRADFTACREVNLVGFSDPDFRNMCILSGCDYLANIPKL 170
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A Y + E ALR + G
Sbjct: 171 GLKTA--YRIIRKHRNVEKALRMLQFDGN 197
>gi|400601842|gb|EJP69467.1| putative EXO1 protein [Beauveria bassiana ARSEF 2860]
Length = 769
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D ++++DSDLLVFGAK+++ KLD GNC ++R + ++ L ++D +FR M I
Sbjct: 162 GLVDGILSDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFGACREVSLTGWSDTEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY G+ G+GLK A
Sbjct: 222 MSGCDYLAGLPGVGLKTA 239
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R + ++ L ++D +FR M I+SGCDY G+ G+
Sbjct: 175 LVFGAKRLLTKLDQYGNCIEINRRDFGACREVSLTGWSDTEFRRMAIMSGCDYLAGLPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK ++++ FLT
Sbjct: 235 GLKTAHRLMRKSKTP--ERVVRMLQFDGK-----RVSENFLT 269
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV M + MLL IK MVFDG +LP+K ATE+ R K+ E + KQ A +L+ +G
Sbjct: 55 YVTTAMHRVRMLLHFGIKPYMVFDGDYLPSKAATEDSRAKKREEK-KQLANDLMKAG 110
>gi|358368265|dbj|GAA84882.1| exonuclease [Aspergillus kawachii IFO 4308]
Length = 688
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
IAG +I+EDSDLLVFGAK+++ KLD G+C ++R + ++ L +TDA FR M
Sbjct: 100 IAG----IISEDSDLLVFGAKRLLSKLDQHGDCIEINRADFSACREVSLIGWTDADFRRM 155
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY I +GLK A
Sbjct: 156 CILSGCDYLPNIARLGLKTA 175
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +
Sbjct: 111 LVFGAKRLLSKLDQHGDCIEINRADFSACREVSLIGWTDADFRRMCILSGCDYLPNIARL 170
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A + + E ALR + G+
Sbjct: 171 GLKTAYRSIRKYK--NVERALRMLQFDGQ 197
>gi|329666197|pdb|3QE9|Y Chain Y, Crystal Structure Of Human Exonuclease 1 Exo1 (D173a) In
Complex With Dna (Complex I)
gi|329666200|pdb|3QE9|Z Chain Z, Crystal Structure Of Human Exonuclease 1 Exo1 (D173a) In
Complex With Dna (Complex I)
Length = 352
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR++G L A E N AG +ITEDS LL FG KK+I K+D GN +
Sbjct: 136 AARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSALLAFGCKKVILKMDQFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA + +PD
Sbjct: 196 DQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDI 250
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 68 QKAAELLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWT 127
+ +A L +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY +
Sbjct: 170 EDSALLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLS 228
Query: 128 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKIT 169
++G+GL KA + +PD + V KIG Y+K+
Sbjct: 229 SLRGIGLAKACKVLRLANNPDI------VKVIKKIGHYLKMN 264
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV +CMK++NMLL+H IK I+VFDG LP+K+
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKK 86
>gi|302418566|ref|XP_003007114.1| exodeoxyribonuclease [Verticillium albo-atrum VaMs.102]
gi|261354716|gb|EEY17144.1| exodeoxyribonuclease [Verticillium albo-atrum VaMs.102]
Length = 273
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+++EDSDLLVFG K+++ KLD GNC ++R + ++ L +TDA+FR M ILSGCD
Sbjct: 175 ILSEDSDLLVFGCKRLLTKLDQYGNCIEINRRDFAACREVSLTGWTDAEFRRMAILSGCD 234
Query: 266 YWTGIKGMGLKKAKDYVFSIMDPD 289
Y G+ MGLK A V P+
Sbjct: 235 YLAGVSNMGLKTAYRMVRQHKTPE 258
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD GNC ++R + ++ L +TDA+FR M ILSGCDY G+ MGLK A
Sbjct: 190 LLTKLDQYGNCIEINRRDFAACREVSLTGWTDAEFRRMAILSGCDYLAGVSNMGLKTAYR 249
Query: 140 YVFSIMDPD 148
V P+
Sbjct: 250 MVRQHKTPE 258
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
YV++ M + ML + +VFDG LP+K TE R KR + K+ ELL +G +
Sbjct: 63 YVDFAMHRVRMLRHFGVTPYLVFDGDFLPSKAMTEGSRAKRRD-DSKKLGMELLKAGKN 120
>gi|320591287|gb|EFX03726.1| exodeoxyribonuclease 1 [Grosmannia clavigera kw1407]
Length = 805
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +++EDSDLLVFGAK+++ K+D+ G+C ++R + ++ L +TD +FR+M I
Sbjct: 162 GLVSGILSEDSDLLVFGAKRLLTKMDMQGHCIEINRRDFCACREISLTDWTDREFRHMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI +GLK A
Sbjct: 222 LSGCDYLEGIGNLGLKTA 239
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ K+D+ G+C ++R + ++ L +TD +FR+M ILSGCDY GI +
Sbjct: 175 LVFGAKRLLTKMDMQGHCIEINRRDFCACREISLTDWTDREFRHMAILSGCDYLEGIGNL 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|307200211|gb|EFN80505.1| Transmembrane protein 35 [Harpegnathos saltator]
Length = 156
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RKEYVKYAKVFPL+ LD KVP+KWYRR++G++E+ICGF+MA IP
Sbjct: 38 RKEYVKYAKVFPLSGTLDFKVPSKWYRRVVGTLEIICGFAMAIIP 82
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%), Gaps = 2/37 (5%)
Query: 367 FILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
F L+G LD KVP+KWYRR++G++E+ICGF+MA IP
Sbjct: 48 FPLSGT--LDFKVPSKWYRRVVGTLEIICGFAMAIIP 82
>gi|326470462|gb|EGD94471.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 725
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD +G+C ++R + + + +TD FR+MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I MGLK A
Sbjct: 222 LSGCDYLANIPKMGLKTA 239
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD +G+C ++R + + + +TD FR+MCILSGCDY I M
Sbjct: 175 LVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLANIPKM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|326478646|gb|EGE02656.1| exodeoxyribonuclease [Trichophyton equinum CBS 127.97]
Length = 725
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD +G+C ++R + + + +TD FR+MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I MGLK A
Sbjct: 222 LSGCDYLANIPKMGLKTA 239
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD +G+C ++R + + + +TD FR+MCILSGCDY I M
Sbjct: 175 LVFGAKRLLSKLDKNGDCIEINRGDFTACRDISMIGWTDENFRHMCILSGCDYLANIPKM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|261195837|ref|XP_002624322.1| exonuclease [Ajellomyces dermatitidis SLH14081]
gi|239587455|gb|EEQ70098.1| exonuclease [Ajellomyces dermatitidis SLH14081]
Length = 855
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + + L +TDA FR MCI
Sbjct: 160 GMINGIISEDSDLLVFGAKRLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 220 LSGCDYLANLPKMGLKTA 237
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L +TDA FR MCILSGCDY + M
Sbjct: 173 LVFGAKRLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKM 232
Query: 133 GLKKA 137
GLK A
Sbjct: 233 GLKTA 237
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL + +VFDG HLP+K TE R +R E K+ EL SG
Sbjct: 53 YVDFAMNRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRRE-ESKKLGLELYRSG 108
>gi|345329438|ref|XP_001514118.2| PREDICTED: exonuclease 1 [Ornithorhynchus anatinus]
Length = 799
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKTGIVHAIITEDSDLLAFGCKKVILKMDKLGNALEIDQARLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + G+GL KA + + +PD
Sbjct: 218 MCILSGCDYLPSLHGIGLAKACRLLRTANNPD 249
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + G+GL KA
Sbjct: 182 VILKMDKLGNALEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLPSLHGIGLAKACR 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ + +PD + V K+G Y+K+
Sbjct: 241 LLRTANNPDV------VKVIKKMGHYLKMN 264
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R +
Sbjct: 55 YVTFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKARRERRQ 97
>gi|327357901|gb|EGE86758.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 857
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + + L +TDA FR MCI
Sbjct: 162 GMINGIISEDSDLLVFGAKRLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLANLPKMGLKTA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 182 LLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 239
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL + +VFDG HLP+K TE R +R E K+ EL SG
Sbjct: 55 YVDFAMNRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRRE-ESKKLGLELYRSG 110
>gi|239614407|gb|EEQ91394.1| exonuclease [Ajellomyces dermatitidis ER-3]
Length = 857
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + + L +TDA FR MCI
Sbjct: 162 GMINGIISEDSDLLVFGAKRLLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLANLPKMGLKTA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + + L +TDA FR MCILSGCDY + MGLK A
Sbjct: 182 LLSKLDKHGDCVEINRGDFTACRDISLIGWTDADFRLMCILSGCDYLANLPKMGLKTA 239
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL + +VFDG HLP+K TE R +R E K+ EL SG
Sbjct: 55 YVDFAMNRVRMLLYFGVTPYLVFDGDHLPSKAGTETARAQRRE-ESKKLGLELYRSG 110
>gi|367048059|ref|XP_003654409.1| hypothetical protein THITE_2117416 [Thielavia terrestris NRRL 8126]
gi|347001672|gb|AEO68073.1| hypothetical protein THITE_2117416 [Thielavia terrestris NRRL 8126]
Length = 760
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +++EDSDLLVFGAK+++ KLD G C ++R + ++ L +TD++FR+M I
Sbjct: 162 GLISGIVSEDSDLLVFGAKRLLTKLDQHGQCVEINRRDFCAVREISLTGWTDSEFRHMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY G+ +GLK A
Sbjct: 222 LSGCDYLEGLNNIGLKTA 239
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G C ++R + ++ L +TD++FR+M ILSGCDY G+ +
Sbjct: 175 LVFGAKRLLTKLDQHGQCVEINRRDFCAVREISLTGWTDSEFRHMAILSGCDYLEGLNNI 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|326915480|ref|XP_003204045.1| PREDICTED: exonuclease 1-like [Meleagris gallopavo]
Length = 778
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+ K+D GN +D+ +L + ++ FT+ KFRY
Sbjct: 159 NKTGMVQAIITEDSDLLAFGCKKVFLKIDKFGNGLEIDQARLGNCKQLGNV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + I G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSIHGIGLAKACKLLKLANNPD 249
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ K+D GN +D+ +L + ++ FT+ KFRYMCILSGCDY + I G+GL KA
Sbjct: 182 VFLKIDKFGNGLEIDQARLGNCKQLGNV-FTEEKFRYMCILSGCDYLSSIHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEG--RSLLSAVTER 197
+ +PD ++K+ Y K+ + +++E++ Q F N L+ +R
Sbjct: 241 LLKLANNPDIIKVIKKMGHYLKMN--ITVSEEYI-----QGFTRANNTFLYQLVFDPIKR 293
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 229
+ DY D + L++ + Y D +G
Sbjct: 294 KLVPLNDYADDVDPETLIYAGR---YPFDSTG 322
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YV +CMK ++MLL+ IK I+VFDG LP+K+ E+ RR++ +
Sbjct: 55 YVAFCMKLVDMLLSFGIKPILVFDGCTLPSKKEVEKARREKRQ 97
>gi|449496989|ref|XP_002193244.2| PREDICTED: exonuclease 1 [Taeniopygia guttata]
Length = 805
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+ K+D GN +D+ +L + ++ FT+ KFRY
Sbjct: 159 NKTGMVQAIITEDSDLLAFGCKKVFLKIDKFGNGLEIDQTRLGNCKQLGNV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY I G+GL KA + +PD
Sbjct: 218 MCILSGCDYLPSIHGIGLAKACKLLKLANNPD 249
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ K+D GN +D+ +L + ++ FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 182 VFLKIDKFGNGLEIDQTRLGNCKQLGNV-FTEEKFRYMCILSGCDYLPSIHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD I V K+G Y+K+
Sbjct: 241 LLKLANNPDI------IKVIKKMGQYLKMN 264
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK+++MLL+ IK I+VFDG LP+K+ E+ RR+R + K +LL G
Sbjct: 54 FYVAFCMKFVHMLLSFGIKPILVFDGCTLPSKKEVEKARRERRQASL-LKGKQLLQEG 110
>gi|402222231|gb|EJU02298.1| PIN domain-like protein, partial [Dacryopinax sp. DJM-731 SS1]
Length = 342
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
AG+ +ITEDSDLLVFG K +++KLD G C + R +L + + D +FR+M
Sbjct: 161 AGHVHGIITEDSDLLVFGCKDVLFKLDTDGQCKRVRRSRLTKCKEASFVGWGDKEFRWMA 220
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY I+GMGLK A
Sbjct: 221 MLSGCDYLPSIQGMGLKTA 239
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+++KLD G C + R +L + + D +FR+M +LSGCDY I+GMGLK A
Sbjct: 181 DVLFKLDTDGQCKRVRRSRLTKCKEASFVGWGDKEFRWMAMLSGCDYLPSIQGMGLKTA 239
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRK-RAEIRHKQKAAELLHSGSS 79
YV+Y M I +L H I+ +VFDG LPAK+ TEE+R K RAE +A ELL G +
Sbjct: 55 YVDYFMGRIRLLRYHNIEPFVVFDGGPLPAKKGTEEERSKSRAEAL--AQARELLAKGKA 112
>gi|383865381|ref|XP_003708152.1| PREDICTED: transmembrane protein 35-like [Megachile rotundata]
Length = 156
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 40/45 (88%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RKEYVKYAKVFPL+ LD KVP+KWYRR++GS+E+ICGF+MA P
Sbjct: 38 RKEYVKYAKVFPLSGTLDFKVPSKWYRRVVGSLEIICGFTMAIFP 82
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 367 FILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
F L+G LD KVP+KWYRR++GS+E+ICGF+MA P
Sbjct: 48 FPLSGT--LDFKVPSKWYRRVVGSLEIICGFTMAIFP 82
>gi|363731591|ref|XP_419550.3| PREDICTED: exonuclease 1 [Gallus gallus]
Length = 798
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+ K+D GN +D+ +L + ++ FT+ KFRY
Sbjct: 159 NKTGVVQAIITEDSDLLAFGCKKVFLKIDKFGNGLEIDQARLGNCKQLGNI-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + I G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSIHGIGLAKACKLLKLANNPD 249
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ K+D GN +D+ +L + ++ FT+ KFRYMCILSGCDY + I G+GL KA
Sbjct: 182 VFLKIDKFGNGLEIDQARLGNCKQLGNI-FTEEKFRYMCILSGCDYLSSIHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEG--RSLLSAVTER 197
+ +PD ++K+ Y K+ + +++E++ Q F N L+ +R
Sbjct: 241 LLKLANNPDIIKVIKKMGHYLKMN--ITVSEEYI-----QGFTRANNTFLYQLVFDPIKR 293
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 229
+ DY D + L++ + Y D +G
Sbjct: 294 KLVPLNDYADDIDPETLLYAGR---YPFDSTG 322
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YV +CMK ++MLL+ IK ++VFDG LP+K+ E+ RR++ +
Sbjct: 55 YVVFCMKLVDMLLSFGIKPVLVFDGCTLPSKKEVEKARREKRQ 97
>gi|346322204|gb|EGX91803.1| exonuclease, putative [Cordyceps militaris CM01]
Length = 763
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D ++++DSDLLVFGA++++ KLD GNC ++R + ++ L+ ++D +FR M I
Sbjct: 162 GLIDGILSDDSDLLVFGAQRLLTKLDQYGNCIEINRRDFGACREISLSGWSDTEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY G+ G+GLK A
Sbjct: 222 MSGCDYLNGLPGVGLKTA 239
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R + ++ L+ ++D +FR M I+SGCDY G+ G+
Sbjct: 175 LVFGAQRLLTKLDQYGNCIEINRRDFGACREISLSGWSDTEFRRMAIMSGCDYLNGLPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK ++++ +LT
Sbjct: 235 GLKTAYRMMRKSKSP--ERVVRMLQFDGK-----RVSENYLT 269
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEE 56
YV M + MLL IK MVFDG +LP+K ATE+
Sbjct: 55 YVASAMHRVRMLLHFGIKPYMVFDGDYLPSKAATED 90
>gi|60102674|gb|AAX14025.1| exonuclease [Monascus pilosus]
Length = 678
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGA++++ KLD G+C ++R + ++ L +TDA FR MCI
Sbjct: 98 GIINGIISEDSDMLVFGARRLLSKLDQHGDCIEINRADFAACKEVSLVGWTDADFRRMCI 157
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 158 LSGCDYLPNISKLGLKTA 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + ++ L +TDA FR MCILSGCDY I +GLK A
Sbjct: 118 LLSKLDQHGDCIEINRADFAACKEVSLVGWTDADFRRMCILSGCDYLPNISKLGLKTA 175
>gi|212546421|ref|XP_002153364.1| exonuclease, putative [Talaromyces marneffei ATCC 18224]
gi|210064884|gb|EEA18979.1| exonuclease, putative [Talaromyces marneffei ATCC 18224]
Length = 749
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGAK+++ KLD G+C ++R + + L ++DA FR MCI
Sbjct: 162 GIINGIISEDSDLLVFGAKRLLSKLDQHGDCIEINRGDFAACRDISLIGWSDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + I +GLK A
Sbjct: 222 LSGCDYLSNIPKLGLKTA 239
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L ++DA FR MCILSGCDY + I +
Sbjct: 175 LVFGAKRLLSKLDQHGDCIEINRGDFAACRDISLIGWSDADFRRMCILSGCDYLSNIPKL 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHK 67
+V++ + + MLL + +VFDG LP+K TE DR K+ E K
Sbjct: 55 HVDFVLNRVRMLLFFGVTPYLVFDGGDLPSKSGTEADRFKKREDSRK 101
>gi|443897892|dbj|GAC75231.1| 5'-3' exonuclease [Pseudozyma antarctica T-34]
Length = 730
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +ITEDSDLLVFG K +++KLD +GN M +++ + ++ L+ +T +FR M I
Sbjct: 162 GIIDGIITEDSDLLVFGCKTVLFKLDQAGNAIEMLQQRFWTNRQLALSGWTAVEFRQMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I GMGLK A
Sbjct: 222 LSGCDYLPSIVGMGLKNA 239
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++++KLD +GN M +++ + ++ L+ +T +FR M ILSGCDY I GMGLK A
Sbjct: 181 TVLFKLDQAGNAIEMLQQRFWTNRQLALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNA 239
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
Y+ + + I +L +K +VFDG LPAK TE+DR +R
Sbjct: 55 YIAHALSRIRLLQHFGVKPYLVFDGDKLPAKRGTEDDREQR 95
>gi|395531535|ref|XP_003767833.1| PREDICTED: exonuclease 1 [Sarcophilus harrisii]
Length = 833
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKTGIVHAIITEDSDLLAFGCKKVILKMDKLGNGLEIDQARLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MC+LSGCDY + + G+GL KA + +PD
Sbjct: 218 MCVLSGCDYLSSLHGIGLAKACKLLKIANNPDI 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMC+LSGCDY + + G+GL KA
Sbjct: 182 VILKMDKLGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCVLSGCDYLSSLHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD I V KIG Y+K+
Sbjct: 241 LLKIANNPDI------IKVIKKIGHYLKMN 264
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVAFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKARRERRQT-NLLKGKQLLREG 110
>gi|315047586|ref|XP_003173168.1| exodeoxyribonuclease 1 [Arthroderma gypseum CBS 118893]
gi|311343554|gb|EFR02757.1| exodeoxyribonuclease 1 [Arthroderma gypseum CBS 118893]
Length = 722
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD +G+C ++R + + L +TD FR+MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKNGDCIEINRGDFTACRDISLIGWTDENFRHMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 222 LSGCDYLANIPKIGLKTA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD +G+C ++R + + L +TD FR+MCILSGCDY I +
Sbjct: 175 LVFGAKRLLSKLDKNGDCIEINRGDFTACRDISLIGWTDENFRHMCILSGCDYLANIPKI 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YV++ + I ML H + +VFDG LP+KEATE R R E
Sbjct: 55 YVDFAIGRIRMLQHHGVTPYIVFDGGMLPSKEATEASRAARRE 97
>gi|325091676|gb|EGC44986.1| exonuclease [Ajellomyces capsulatus H88]
Length = 830
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD G+C ++R + + L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLANLPKMGLKTA 239
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L +TDA FR MCILSGCDY + M
Sbjct: 175 LVFGAKRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL I +VFDG +LP+K TE R +R E K+ EL SG
Sbjct: 55 YVDFAMNRVRMLLYFGITPYLVFDGDNLPSKAGTESARAQRRE-ESKKLGLELYRSG 110
>gi|319411532|emb|CBQ73576.1| related to EXO1-exonuclease which interacts with Msh2p [Sporisorium
reilianum SRZ2]
Length = 758
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +ITEDSDLLVFG K +++KLD +GN M +++ + ++ L+ +T +FR M I
Sbjct: 162 GIVDGIITEDSDLLVFGCKTVLFKLDQAGNAVEMLQQRFWTNRQIALSGWTAVEFRQMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I GMGLK A
Sbjct: 222 LSGCDYLPSIVGMGLKNA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 26/151 (17%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
++++KLD +GN M +++ + ++ L+ +T +FR M ILSGCDY I GMGLK A
Sbjct: 181 TVLFKLDQAGNAVEMLQQRFWTNRQIALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAH 240
Query: 139 DYV--FSIMDPDFENALRKINVYGKIGSYVKITKEF-------------------LTSGA 177
+ + +D L+ + + GK+ +EF L +
Sbjct: 241 RLLRRYKTVD----KVLQAVRLEGKMRVPPTYAREFRKAELTFVHQRVFDPRSQKLVTLT 296
Query: 178 PQPFGARNEGRSLLSAVTERNIA-GYADYVI 207
P P G +E + A E ++A G AD I
Sbjct: 297 PLPDGTHDEMLPFIGAAMEDDVAKGVADGTI 327
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y+ + + I ML +K +VFDG LPAK TE+DR +R + ++A EL G+
Sbjct: 55 YIAHALSRIRMLQHFGVKPYLVFDGDKLPAKSGTEDDREQR-RSDNLRRANELEQQGN 111
>gi|240274250|gb|EER37767.1| exonuclease [Ajellomyces capsulatus H143]
Length = 829
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD G+C ++R + + L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLANLPKMGLKTA 239
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L +TDA FR MCILSGCDY + M
Sbjct: 175 LVFGAKRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL I +VFDG +LP+K TE R +R E K+ EL SG
Sbjct: 55 YVDFAMNRVRMLLYFGITPYLVFDGDNLPSKAGTESARAQRRE-ESKKLGLELYRSG 110
>gi|225554873|gb|EEH03167.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 773
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD G+C ++R + + L +TDA FR MCI
Sbjct: 103 GIINGIISEDSDMLVFGAKRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCI 162
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 163 LSGCDYLANLPKMGLKTA 180
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L +TDA FR MCILSGCDY + M
Sbjct: 116 LVFGAKRLLSKLDKHGDCVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKM 175
Query: 133 GLKKA 137
GLK A
Sbjct: 176 GLKTA 180
>gi|432904048|ref|XP_004077258.1| PREDICTED: exonuclease 1-like [Oryzias latipes]
Length = 752
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
+G A VITEDSDLL FG K +I K+D GN +D+ L + FT+ KFRYMC
Sbjct: 161 SGLAQAVITEDSDLLAFGCKTVILKMDKQGNGLEIDQGNLGRCRSL-GNIFTEEKFRYMC 219
Query: 260 ILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
ILSGCDY + G+GL KA + DPD
Sbjct: 220 ILSGCDYLPSLHGIGLGKACKLLRLAKDPDI 250
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YC+K+++MLL IK I+VFDGR+LP+K+ E+ RR+R E + QK LL G
Sbjct: 55 YVWYCLKFVDMLLNFSIKPILVFDGRNLPSKQEVEKARRERREA-NLQKGRRLLREG 110
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
++I K+D GN +D+ L + FT+ KFRYMCILSGCDY + G+GL KA
Sbjct: 181 TVILKMDKQGNGLEIDQGNLGRCRSL-GNIFTEEKFRYMCILSGCDYLPSLHGIGLGKAC 239
Query: 139 DYVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ DPD + V K+G Y+K+
Sbjct: 240 KLLRLAKDPDI------LKVIKKMGQYLKMN 264
>gi|340518752|gb|EGR48992.1| nuclease-like protein [Trichoderma reesei QM6a]
Length = 733
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ +I++DSDLLVFGAK+++ KLD GNC ++R + ++ L ++D +FR M I
Sbjct: 159 GFVSGIISDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREISLTGWSDTEFRRMAI 218
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY G+ G+GLK A
Sbjct: 219 MSGCDYLHGLPGVGLKTA 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R + ++ L ++D +FR M I+SGCDY G+ G+
Sbjct: 172 LVFGAKRLLTKLDQYGNCIEINRRDFCACREISLTGWSDTEFRRMAIMSGCDYLHGLPGV 231
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + + GK +I++ +LT
Sbjct: 232 GLKTAYRMIRKTKSP--ERIVRLLQLDGK-----RISENYLT 266
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+N + + ML + MVFDG LP+K ATEE R K+ E + K A E L +G
Sbjct: 52 YINGVLHRVKMLKHFGVTPYMVFDGDFLPSKAATEESRAKKREEKLKL-ANEYLKAG 107
>gi|189200895|ref|XP_001936784.1| exodeoxyribonuclease 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983883|gb|EDU49371.1| exodeoxyribonuclease 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 724
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + V++EDSDLLVFG K +I KLD G+C ++R + ++ ++DA FR MCI
Sbjct: 162 GIINGVLSEDSDLLVFGVKCLITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI G+GLK A
Sbjct: 222 LSGCDYLPGIGGLGLKTA 239
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KLD G+C ++R + ++ ++DA FR MCILSGCDY GI G+GLK A
Sbjct: 182 LITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCILSGCDYLPGIGGLGLKTA 239
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEED 57
YV++ M ++ML+ I +VFDG +LP+K TE+D
Sbjct: 55 YVDFVMNRVHMLIHFGITPYLVFDGDNLPSKAGTEKD 91
>gi|429852832|gb|ELA27949.1| exo1 protein [Colletotrichum gloeosporioides Nara gc5]
Length = 791
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +++EDSDLLVFG K+++ KLD GNC ++R + ++ L ++D FR M I
Sbjct: 162 GLIDGILSEDSDLLVFGCKRLLTKLDQYGNCIEINRRDFCACREVSLTGWSDTDFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI MGLK A
Sbjct: 222 LSGCDYLEGINNMGLKTA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD GNC ++R + ++ L ++D FR M ILSGCDY GI MGLK A
Sbjct: 182 LLTKLDQYGNCIEINRRDFCACREVSLTGWSDTDFRRMAILSGCDYLEGINNMGLKTA 239
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL +K +VFDG LP+K ATE R KR + K+ A ELL +G
Sbjct: 55 YVDFAMHRVRMLLHFGVKPYLVFDGDFLPSKAATEGSRAKRRD-ESKKTAMELLKAG 110
>gi|330921374|ref|XP_003299400.1| hypothetical protein PTT_10376 [Pyrenophora teres f. teres 0-1]
gi|311326983|gb|EFQ92536.1| hypothetical protein PTT_10376 [Pyrenophora teres f. teres 0-1]
Length = 725
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + V++EDSDLLVFG K +I KLD G+C ++R + ++ ++DA FR MCI
Sbjct: 162 GIINGVLSEDSDLLVFGVKCLITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI G+GLK A
Sbjct: 222 LSGCDYLPGIGGLGLKTA 239
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KLD G+C ++R + ++ ++DA FR MCILSGCDY GI G+GLK A
Sbjct: 182 LITKLDKYGDCIEVNRNHFTACREVSFVGWSDADFRRMCILSGCDYLPGIGGLGLKTA 239
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEED 57
YV++ M + ML+ I +VFDG +LP+K TE+D
Sbjct: 55 YVDFVMNRVRMLIHFGITPYLVFDGDNLPSKAGTEKD 91
>gi|367031744|ref|XP_003665155.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
gi|347012426|gb|AEO59910.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
Length = 760
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +++EDSDLLVFGAK+++ KLD G C ++R + ++ L +TD +FR+M I
Sbjct: 162 GLISGIVSEDSDLLVFGAKRLLTKLDQHGQCVEINRRDFCAVREISLTGWTDREFRHMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY G+ +GLK A
Sbjct: 222 LSGCDYLDGVSNIGLKTA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G C ++R + ++ L +TD +FR+M ILSGCDY G+ +
Sbjct: 175 LVFGAKRLLTKLDQHGQCVEINRRDFCAVREISLTGWTDREFRHMAILSGCDYLDGVSNI 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|358394562|gb|EHK43955.1| hypothetical protein TRIATDRAFT_319288 [Trichoderma atroviride IMI
206040]
Length = 797
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ++++DSDLLVFGAK+++ KLD GNC ++R + ++ L ++DA+FR M I
Sbjct: 162 GLVGGILSDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY G+ G+GLK A
Sbjct: 222 MSGCDYLNGLPGVGLKTA 239
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R + ++ L ++DA+FR M I+SGCDY G+ G+
Sbjct: 175 LVFGAKRLLTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAIMSGCDYLNGLPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK +I++ +LT
Sbjct: 235 GLKTAYRLLRKSKSP--ERIVRMLQFDGK-----RISENYLT 269
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++N + + ML + MVFDG +LP+K ATEE R K+ E + K A E L +G S
Sbjct: 55 FINAALHRVRMLKHFGVTPYMVFDGDYLPSKAATEESRAKKREEKLK-IANEYLKAGKS 112
>gi|154281289|ref|XP_001541457.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411636|gb|EDN07024.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 832
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK+++ KLD G C ++R + + L +TDA FR MCI
Sbjct: 162 GIINGIISEDSDMLVFGAKRLLSKLDKHGECVEINRADFTACRDISLIGWTDADFRLMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLANLPKMGLKTA 239
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G C ++R + + L +TDA FR MCILSGCDY + M
Sbjct: 175 LVFGAKRLLSKLDKHGECVEINRADFTACRDISLIGWTDADFRLMCILSGCDYLANLPKM 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + MLL + +VFDG +LP+K TE R +R E ++ EL SG
Sbjct: 55 YVDFAMNRVRMLLYFGVTPYLVFDGDNLPSKAGTESARAQRRE-ESRKLGLELYRSG 110
>gi|115384774|ref|XP_001208934.1| hypothetical protein ATEG_01569 [Aspergillus terreus NIH2624]
gi|114196626|gb|EAU38326.1| hypothetical protein ATEG_01569 [Aspergillus terreus NIH2624]
Length = 748
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+I+EDSDLLVFGA++++ KLD G+C ++R + + L +TDA FR MCILSGCD
Sbjct: 167 IISEDSDLLVFGARRLLSKLDQHGDCIEINRADFAACRDVSLIGWTDADFRRMCILSGCD 226
Query: 266 YWTGIKGMGLKKA 278
Y I +GLK A
Sbjct: 227 YLPNIPRLGLKTA 239
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD G+C ++R + + L +TDA FR MCILSGCDY I +GLK A
Sbjct: 182 LLSKLDQHGDCIEINRADFAACRDVSLIGWTDADFRRMCILSGCDYLPNIPRLGLKTAYR 241
Query: 140 YVFSIMDPDFENALRKINVYGK 161
+ + E ALR + G+
Sbjct: 242 SIRKYK--NVERALRMLQFEGQ 261
>gi|258564967|ref|XP_002583228.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906929|gb|EEP81330.1| predicted protein [Uncinocarpus reesii 1704]
Length = 746
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGA+ ++ KLD G+C + R L + A +TD FR MCI
Sbjct: 179 GIINGIISEDSDMLVFGARILVSKLDKHGDCIEISRNNLSACRDASFAGWTDENFRQMCI 238
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I G+GLK +
Sbjct: 239 LSGCDYLPNIPGLGLKTS 256
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C + R L + A +TD FR MCILSGCDY I G+GLK +
Sbjct: 199 LVSKLDKHGDCIEISRNNLSACRDASFAGWTDENFRQMCILSGCDYLPNIPGLGLKTS 256
>gi|443709639|gb|ELU04231.1| hypothetical protein CAPTEDRAFT_95129 [Capitella teleta]
Length = 423
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
G A +ITEDSDL++FG I++K+D SG + + L A+K+ A +T KFRYMC
Sbjct: 161 TGIAQVIITEDSDLILFGCHTIMFKMDTSGAGMLIQNKDLNKAMKLQDAHYTFDKFRYMC 220
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY + G+GL KA
Sbjct: 221 MLSGCDYHANLPGIGLSKA 239
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 81/186 (43%), Gaps = 68/186 (36%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAK---EATEEDRR--------------KRA 62
+YV YCMKYINMLL++ IK I+V DG HLP+K E +RR KR
Sbjct: 54 MYVYYCMKYINMLLSYDIKPILVLDGCHLPSKKNVEKKRRERRELNRKKAAQLLRDGKRK 113
Query: 63 EIRH---------KQKAAELLHSG------------------------------------ 77
E R Q A EL+++
Sbjct: 114 EARDALVQCIDITPQMALELMNACRDKGVDCITAPYEADAQLAYLSQTGIAQVIITEDSD 173
Query: 78 ------SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 131
+I++K+D SG + + L A+K+ A +T KFRYMC+LSGCDY + G
Sbjct: 174 LILFGCHTIMFKMDTSGAGMLIQNKDLNKAMKLQDAHYTFDKFRYMCMLSGCDYHANLPG 233
Query: 132 MGLKKA 137
+GL KA
Sbjct: 234 IGLSKA 239
>gi|324503167|gb|ADY41381.1| Exonuclease 1 [Ascaris suum]
Length = 708
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA-KFTDAKFRYMC 259
G A V+TEDSDL+ FG ++II+K++ +G+C ++ +LP L LA F KFR +C
Sbjct: 163 GMAHAVVTEDSDLIAFGCERIIFKMEATGSCTIYEQSQLPKCLCKALADDFDFTKFRRIC 222
Query: 260 ILSGCDY-WTGIKGMGLKKAKDYVFSIMDPDFE 291
IL+GCDY +G+ G+GL KA ++ D E
Sbjct: 223 ILAGCDYLQSGLPGVGLNKAATFMAKTSGSDLE 255
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDY-WTGIKGMGLKKA 137
II+K++ +G+C ++ +LP L LA F KFR +CIL+GCDY +G+ G+GL KA
Sbjct: 183 IIFKMEATGSCTIYEQSQLPKCLCKALADDFDFTKFRRICILAGCDYLQSGLPGVGLNKA 242
Query: 138 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
++ D E L ++ Y + S +KI KEF+
Sbjct: 243 ATFMAKTSGSDLERILPRLPRYLNM-SNLKIKKEFI 277
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV Y MKY+ +LLA VI+VFDG+ LPAK+ T RR++ + HK+K +LL G
Sbjct: 54 FYVRYVMKYVKLLLAIHCHVILVFDGKPLPAKQETNIARREKRD-EHKRKGEQLLSEG 110
>gi|145252118|ref|XP_001397572.1| exonuclease [Aspergillus niger CBS 513.88]
gi|134083116|emb|CAK46789.1| unnamed protein product [Aspergillus niger]
Length = 758
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +I+EDSDLLVFGAK+++ KLD G+C ++R + ++ L +TD FR MCI
Sbjct: 162 GVISGIISEDSDLLVFGAKRLLSKLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 222 LSGCDYLPNIARLGLKTA 239
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD G+C ++R + ++ L +TD FR MCILSGCDY I +GLK A
Sbjct: 182 LLSKLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCILSGCDYLPNIARLGLKTAYR 241
Query: 140 YVFSIMDPDFENALRKINVYGK 161
+ + E ALR + G+
Sbjct: 242 SIRKYK--NVERALRMLQFDGQ 261
>gi|340711710|ref|XP_003394414.1| PREDICTED: transmembrane protein 35-like [Bombus terrestris]
Length = 124
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 40/45 (88%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RKEYVKYAKVFPL+ LD KVP+KWYRR++GS+E+ICG +MA +P
Sbjct: 38 RKEYVKYAKVFPLSGTLDFKVPSKWYRRVVGSLEIICGLAMAIVP 82
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 367 FILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
F L+G LD KVP+KWYRR++GS+E+ICG +MA +P
Sbjct: 48 FPLSGT--LDFKVPSKWYRRVVGSLEIICGLAMAIVP 82
>gi|380019078|ref|XP_003693443.1| PREDICTED: transmembrane protein 35-like [Apis florea]
Length = 156
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 40/45 (88%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RKEYVKYAKVFPL+ LD KVP+KWYRR++GS+E+ICG +MA +P
Sbjct: 38 RKEYVKYAKVFPLSGTLDFKVPSKWYRRVVGSLEIICGLAMAIVP 82
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 367 FILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
F L+G LD KVP+KWYRR++GS+E+ICG +MA +P
Sbjct: 48 FPLSG--TLDFKVPSKWYRRVVGSLEIICGLAMAIVP 82
>gi|164657682|ref|XP_001729967.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
gi|159103861|gb|EDP42753.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
Length = 572
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +ITEDSDLLVFG K +++KLD G+C + R++ A ++ ++ FR M I
Sbjct: 81 GLIDAIITEDSDLLVFGCKTVLFKLDTYGHCVEIQRDRFVHAKQLAFDGWSLDDFRRMAI 140
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY I GMGLK A ++
Sbjct: 141 LSGCDYLPSITGMGLKNAHKFL 162
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
++++KLD G+C + R++ A ++ ++ FR M ILSGCDY I GMGLK A
Sbjct: 100 TVLFKLDTYGHCVEIQRDRFVHAKQLAFDGWSLDDFRRMAILSGCDYLPSITGMGLKNAH 159
Query: 139 DYVFSIMDPDFENALRKINVYGKI 162
++ E LR + + GK+
Sbjct: 160 KFLRKYE--SIERVLRVLQLEGKM 181
>gi|408397964|gb|EKJ77101.1| hypothetical protein FPSE_02745 [Fusarium pseudograminearum CS3096]
Length = 747
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I++DSDLLVFGAKK++ KLD GNC ++R+ + ++ L ++D +FR M I
Sbjct: 162 GLINGIISDDSDLLVFGAKKLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
SGCDY G+ G+GLK A
Sbjct: 222 FSGCDYLDGLPGVGLKTA 239
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R+ + ++ L ++D +FR M I SGCDY G+ G+
Sbjct: 175 LVFGAKKLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK ++++ +LT
Sbjct: 235 GLKTAYRMLRKTKVP--ERIVRMVQFQGK-----RVSENYLT 269
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAA-ELLHSG 77
Y+N M + ML I MVFDG LP+K ATE+ R K+ + K+KAA ELL +G
Sbjct: 55 YLNAAMTRVRMLRHFGITPYMVFDGDFLPSKAATEDSRAKKRD--EKKKAAMELLRAG 110
>gi|342873165|gb|EGU75385.1| hypothetical protein FOXB_14090 [Fusarium oxysporum Fo5176]
Length = 743
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I++DSDLLVFGAKK++ KLD GNC ++R+ + ++ L ++D +FR M I
Sbjct: 159 GLINGIISDDSDLLVFGAKKLLTKLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAI 218
Query: 261 LSGCDYWTGIKGMGLKKA 278
SGCDY G+ G+GLK A
Sbjct: 219 FSGCDYLRGLPGIGLKTA 236
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R+ + ++ L ++D +FR M I SGCDY G+ G+
Sbjct: 172 LVFGAKKLLTKLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLRGLPGI 231
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + + G+ K+++ +LT
Sbjct: 232 GLKTAYRMLRKTKAP--ERIVRMVQMQGR-----KVSENYLT 266
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKRAEIRHKQKAAELLHSG 77
Y++ M + ML + MVFDG LP+K ATEE R KR E K+ A ELL +G
Sbjct: 52 YLHAAMNRVRMLRHFGVTPYMVFDGDFLPSKAATEESRDTKRNE--KKKAAMELLRAG 107
>gi|148227124|ref|NP_001083827.1| exonuclease 1 [Xenopus laevis]
gi|54035218|gb|AAH84102.1| EXOI protein [Xenopus laevis]
Length = 734
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR+EG + A E N +A+ +ITEDSDLL FG KK++ K+D GN +
Sbjct: 136 AARSEGVDYIVAPYEADSQLAYLNKNDFAEAIITEDSDLLAFGCKKVLLKMDKFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ + + FT+ KFRYMCILSGCDY I G+GL KA + +PD
Sbjct: 196 DQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKACKLLKVANNPDI 250
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ K+D GN +D+ + + FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 182 VLLKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD ++KI Y K
Sbjct: 241 LLKVANNPDITKVIQKIGQYLKTN 264
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK ++MLL+ +K I+VFDG LP+K+ E+ RR++ + + QK +LL G
Sbjct: 55 YVQFCMKLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQT-NLQKGKQLLREG 110
>gi|156355443|ref|XP_001623677.1| predicted protein [Nematostella vectensis]
gi|156210399|gb|EDO31577.1| predicted protein [Nematostella vectensis]
Length = 306
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
E + L+ + ++NI VI+EDSDLLV+G KK+++K+D SG + + L +
Sbjct: 150 EADAQLAYLMKKNII---QAVISEDSDLLVYGCKKVMFKMDASGYGTLVSLDHLSELTNL 206
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 279
+ +FT KFR+MCILSGCDY IKG+GL KA
Sbjct: 207 KMHEFTLEKFRHMCILSGCDYLPSIKGIGLIKAN 240
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L++ +++K+D SG + + L + + +FT KFR+MCILSGCDY IKG+
Sbjct: 175 LVYGCKKVMFKMDASGYGTLVSLDHLSELTNLKMHEFTLEKFRHMCILSGCDYLPSIKGI 234
Query: 133 GLKKAK 138
GL KA
Sbjct: 235 GLIKAN 240
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
+Y+NY +K INM+L H +K ++VFDG +LP+K E +RRK R++ KA L
Sbjct: 54 VYINYVLKRINMMLFHDVKPVLVFDGAYLPSKANKEAERRKS---RNENKANGL 104
>gi|82119986|sp|Q9W6K2.1|EXO1_XENLA RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I
gi|4884906|gb|AAD31867.1|AF134570_1 exonuclease ExoI [Xenopus laevis]
Length = 734
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 182 GARNEGRSLLSAVTER-------NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM 234
AR+EG + A E N +A+ +ITEDSDLL FG KK++ K+D GN +
Sbjct: 136 AARSEGVDYIVAPYEADSQLAYLNKNDFAEAIITEDSDLLAFGCKKVLLKMDKFGNGLEI 195
Query: 235 DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
D+ + + FT+ KFRYMCILSGCDY I G+GL KA + +PD
Sbjct: 196 DQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKACKLLKVANNPDI 250
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ K+D GN +D+ + + FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 182 VLLKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD ++KI Y K
Sbjct: 241 LLKVANNPDITKVIQKIGQYLKTN 264
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK ++MLL+ +K I+VFDG LP+K+ E+ RR++ + + QK +LL G
Sbjct: 55 YVQFCMKLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQT-NLQKGKQLLREG 110
>gi|350633529|gb|EHA21894.1| 5'-3' exonuclease [Aspergillus niger ATCC 1015]
Length = 672
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +I+EDSDLLVFGAK+++ KLD G+C ++R + ++ L +TD FR MCI
Sbjct: 158 GVISGIISEDSDLLVFGAKRLLSKLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCI 217
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 218 LSGCDYLPNIARLGLKTA 235
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + ++ L +TD FR MCILSGCDY I +
Sbjct: 171 LVFGAKRLLSKLDQHGDCIEINRADFSACREVSLIGWTDDDFRRMCILSGCDYLPNIARL 230
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A + + E ALR + G+
Sbjct: 231 GLKTAYRSIRKYK--NVERALRMLQFDGQ 257
>gi|350405939|ref|XP_003487600.1| PREDICTED: transmembrane protein 35-like [Bombus impatiens]
Length = 156
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 40/45 (88%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RKEYVKYAKVFPL+ LD KVP+KWYRR++GS+E+ICG +MA +P
Sbjct: 38 RKEYVKYAKVFPLSGTLDFKVPSKWYRRVVGSLEIICGLAMAIVP 82
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 367 FILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
F L+G LD KVP+KWYRR++GS+E+ICG +MA +P
Sbjct: 48 FPLSGT--LDFKVPSKWYRRVVGSLEIICGLAMAIVP 82
>gi|403179055|ref|XP_003337407.2| hypothetical protein PGTG_19001 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164590|gb|EFP92988.2| hypothetical protein PGTG_19001 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 685
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +ITEDSDLLV+GA+ +++K+D SG+C + R++L + + + +FR M +
Sbjct: 162 GEVHGIITEDSDLLVYGARNVLFKMDPSGHCIHICRDELGQVHDKRMGLWDERQFRQMAM 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY + I G+G+KKA D +
Sbjct: 222 LSGCDYLSSIPGLGIKKAHDLI 243
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L++ ++++K+D SG+C + R++L + + + +FR M +LSGCDY + I G+
Sbjct: 175 LVYGARNVLFKMDPSGHCIHICRDELGQVHDKRMGLWDERQFRQMAMLSGCDYLSSIPGL 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
G+KKA D + E A++ + GK+ K + F
Sbjct: 235 GIKKAHDLIRRHQ--TAERAIKATRLDGKLPVPPKYEQSF 272
>gi|71018115|ref|XP_759288.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
gi|46099138|gb|EAK84371.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
Length = 828
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D V+TEDSDLLVFG K +++KLD +GN M + + + ++ L+ +T +FR M I
Sbjct: 162 GIIDGVVTEDSDLLVFGCKTVLFKLDQAGNAVEMLQHRFWTNRQVALSGWTAVEFRQMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I GMGLK A
Sbjct: 222 LSGCDYLPSIVGMGLKNA 239
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++++KLD +GN M + + + ++ L+ +T +FR M ILSGCDY I GMGLK A
Sbjct: 181 TVLFKLDQAGNAVEMLQHRFWTNRQVALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNA 239
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
Y+ + + I ML +K +VFDG LPAK+ TE++R +R
Sbjct: 55 YIAHAVSRIRMLQHFGVKPYLVFDGDKLPAKKGTEDEREQR 95
>gi|119190955|ref|XP_001246084.1| hypothetical protein CIMG_05525 [Coccidioides immitis RS]
Length = 677
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK ++ KLD G+C ++R + + L +TD FR MCI
Sbjct: 103 GIVNGIISEDSDMLVFGAKVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCI 162
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 163 LSGCDYLPNIPKLGLKTA 180
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK A
Sbjct: 123 LLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTA 180
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 26 MKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSIIYKLD 85
M + MLL + + +VFDG LP+K++TEE R R E K+ EL +G + + +
Sbjct: 1 MHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARRE-ESKRLGLELYRTGRTSQAQQE 59
Query: 86 L 86
L
Sbjct: 60 L 60
>gi|46125331|ref|XP_387219.1| hypothetical protein FG07043.1 [Gibberella zeae PH-1]
Length = 747
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I++DSDLLVFGAKK++ KLD GNC ++R+ + ++ L ++D +FR M I
Sbjct: 162 GLINGIISDDSDLLVFGAKKLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
SGCDY G+ G+GLK A
Sbjct: 222 FSGCDYLDGLPGVGLKTA 239
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R+ + ++ L ++D +FR M I SGCDY G+ G+
Sbjct: 175 LVFGAKKLLTKLDQYGNCLEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK ++++ +LT
Sbjct: 235 GLKTAYRMLRKTKVP--ERIVRMVQFQGK-----RVSENYLT 269
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAA-ELLHSG 77
Y+N M + ML I MVFDG LP+K ATE+ R K+ + K+KAA ELL +G
Sbjct: 55 YLNAAMTRVRMLRHFGITPYMVFDGDFLPSKAATEDSRAKKRD--EKKKAAMELLRAG 110
>gi|169622701|ref|XP_001804759.1| hypothetical protein SNOG_14577 [Phaeosphaeria nodorum SN15]
gi|160704833|gb|EAT78117.2| hypothetical protein SNOG_14577 [Phaeosphaeria nodorum SN15]
Length = 670
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D V++EDSDLLVFG K +I KLD G+C ++R + ++ ++DA FR M I
Sbjct: 178 GIIDGVLSEDSDLLVFGVKCLITKLDKYGDCVEINRNHFTACREVSFVGWSDADFRRMAI 237
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI G+GLK A
Sbjct: 238 LSGCDYLPGIGGLGLKTA 255
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KLD G+C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 198 LITKLDKYGDCVEINRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 255
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEED 57
YV++CM + ML+ I ++FDG +LP+K TE+D
Sbjct: 71 YVDFCMNRVRMLIHFGITPYIIFDGDNLPSKAGTEKD 107
>gi|392868930|gb|EAS30280.2| exonuclease [Coccidioides immitis RS]
Length = 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK ++ KLD G+C ++R + + L +TD FR MCI
Sbjct: 162 GIVNGIISEDSDMLVFGAKVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 222 LSGCDYLPNIPKLGLKTA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK A
Sbjct: 182 LLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTA 239
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
YV++ M + MLL + + +VFDG LP+K++TEE R R E K+ EL +G +
Sbjct: 55 YVDFAMHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARRE-ESKRLGLELYRTGRTS 113
Query: 81 IYKLDL 86
+ +L
Sbjct: 114 QAQQEL 119
>gi|301606138|ref|XP_002932663.1| PREDICTED: exonuclease 1-like, partial [Xenopus (Silurana)
tropicalis]
Length = 651
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N +A+ +ITEDSDLL FG KK+I K+D GN +D+ + + FT+ KFRY
Sbjct: 74 NKNEFAEAIITEDSDLLAFGCKKVILKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRY 132
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY I G+GL KA + +PD
Sbjct: 133 MCILSGCDYLPSIHGIGLAKACKLLKIANNPDI 165
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ + + FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 97 VILKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSIHGIGLAKACK 155
Query: 140 YVFSIMDPDFENALRKINVYGKIG 163
+ +PD ++KI Y K
Sbjct: 156 LLKIANNPDITTVIKKIGQYLKTN 179
>gi|242823476|ref|XP_002488074.1| exonuclease, putative [Talaromyces stipitatus ATCC 10500]
gi|218712995|gb|EED12420.1| exonuclease, putative [Talaromyces stipitatus ATCC 10500]
Length = 767
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSDLLVFGA++++ KLD G+C ++R + + L + DA FR MCI
Sbjct: 162 GIINGIISEDSDLLVFGARRLLSKLDQHGDCIEINRGDFAACRDISLIGWIDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + I +GLK A
Sbjct: 222 LSGCDYLSNIPKLGLKTA 239
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G+C ++R + + L + DA FR MCILSGCDY + I +
Sbjct: 175 LVFGARRLLSKLDQHGDCIEINRGDFAACRDISLIGWIDADFRRMCILSGCDYLSNIPKL 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|67525155|ref|XP_660639.1| hypothetical protein AN3035.2 [Aspergillus nidulans FGSC A4]
gi|40744430|gb|EAA63606.1| hypothetical protein AN3035.2 [Aspergillus nidulans FGSC A4]
gi|259486018|tpe|CBF83526.1| TPA: 5'-3' exonuclease and flap-endonuclease (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 761
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ D +I+EDSDLLVFGAK+++ KLD G ++R + ++ +TDA FR MCI
Sbjct: 162 GFIDGIISEDSDLLVFGAKRLLSKLDQHGELIEINRADFTACREVSFVGWTDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY I +GLK A
Sbjct: 222 MSGCDYLPNIARVGLKTA 239
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G ++R + ++ +TDA FR MCI+SGCDY I +GLK A
Sbjct: 182 LLSKLDQHGELIEINRADFTACREVSFVGWTDADFRRMCIMSGCDYLPNIARVGLKTA 239
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQK 69
++++ + + MLL +K +VFDG +LP+K TE DR++R RH+ K
Sbjct: 55 HIDFVLSRVRMLLFFGVKPYLVFDGDNLPSKSGTELDRQQR---RHESK 100
>gi|449680108|ref|XP_002160163.2| PREDICTED: exonuclease 1-like [Hydra magnipapillata]
Length = 687
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
+G I+EDSDLL++G K++YK+ G+ +D + L + L+ FT FR MC
Sbjct: 161 SGITQLTISEDSDLLLYGCNKVLYKMSSEGDGMLVDIDNLSKVRSVQLSSFTLDNFRQMC 220
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY IKGMGLKKA
Sbjct: 221 MLSGCDYLPSIKGMGLKKA 239
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
LL+ + ++YK+ G+ +D + L + L+ FT FR MC+LSGCDY IKGM
Sbjct: 175 LLYGCNKVLYKMSSEGDGMLVDIDNLSKVRSVQLSSFTLDNFRQMCMLSGCDYLPSIKGM 234
Query: 133 GLKKA 137
GLKKA
Sbjct: 235 GLKKA 239
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+Y+ Y M+ +NML+ + I I+VFDG HLPAK + +E R+ I ++ +A E L +G+S
Sbjct: 54 VYIQYVMRRVNMLINYDITPILVFDGGHLPAK-SEKEKERREKRIEYRARALEALRNGNS 112
>gi|303315399|ref|XP_003067707.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107377|gb|EER25562.1| XPG family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 736
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK ++ KLD G+C ++R + + L +TD FR MCI
Sbjct: 162 GIVNGIISEDSDMLVFGAKVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 222 LSGCDYLPNIPKLGLKTA 239
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK A
Sbjct: 182 LLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTA 239
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
YV++ M + MLL + + +VFDG LP+K++TEE R R E K+ EL +G +
Sbjct: 55 YVDFAMHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARRE-ESKRLGLELYRTGRTS 113
Query: 81 IYKLDL 86
+ +L
Sbjct: 114 QAQQEL 119
>gi|320035457|gb|EFW17398.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 736
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + +I+EDSD+LVFGAK ++ KLD G+C ++R + + L +TD FR MCI
Sbjct: 162 GIVNGIISEDSDMLVFGAKVLLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I +GLK A
Sbjct: 222 LSGCDYLPNIPKLGLKTA 239
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + + L +TD FR MCILSGCDY I +GLK A
Sbjct: 182 LLSKLDKHGDCIEINRSNFSACRDVSLTGWTDENFRQMCILSGCDYLPNIPKLGLKTA 239
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
YV++ M + MLL + + +VFDG LP+K++TEE R R E K+ EL +G +
Sbjct: 55 YVDFAMHRVRMLLYYGVTPYLVFDGGRLPSKDSTEETRAARRE-ESKRLGLELYRTGRTS 113
Query: 81 IYKLDL 86
+ +L
Sbjct: 114 QAQQEL 119
>gi|388582387|gb|EIM22692.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 649
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----SALKMPLAKFTDAKFR 256
G D +ITEDSDLLVFGAKK+I+KL G+C + R++ + K+TD FR
Sbjct: 179 GIVDGIITEDSDLLVFGAKKVIFKLRQDGSCDEVSRDRFGLVRIDGKALCSGKWTDVHFR 238
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
M +LSGCDY + G+GLKKA D V
Sbjct: 239 RMAMLSGCDYLKSLPGVGLKKAFDAV 264
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLP----SALKMPLAKFTDAKFRYMCILSGCDYWTG 128
L+ +I+KL G+C + R++ + K+TD FR M +LSGCDY
Sbjct: 192 LVFGAKKVIFKLRQDGSCDEVSRDRFGLVRIDGKALCSGKWTDVHFRRMAMLSGCDYLKS 251
Query: 129 IKGMGLKKAKDYV----------FSIMDPDFENALRKI 156
+ G+GLKKA D V F ++EN +RK+
Sbjct: 252 LPGVGLKKAFDAVRRGGETFDMIFIYFTHNYENKVRKV 289
>gi|380088926|emb|CCC13206.1| putative EXO1 protein [Sordaria macrospora k-hell]
Length = 748
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
V++EDSDLLVFGAK+++ K+D G C ++R + + ++ L +TDA+FR+M I SGCD
Sbjct: 167 VVSEDSDLLVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCD 226
Query: 266 YWTGIKGMGLKKA 278
Y + MGLK A
Sbjct: 227 YLDSLPSMGLKTA 239
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ K+D G C ++R + + ++ L +TDA+FR+M I SGCDY + M
Sbjct: 175 LVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCDYLDSLPSM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKI 162
GLK A + + P E ++K+ GKI
Sbjct: 235 GLKTAYRMIRKLKTP--ERIVKKLQFDGKI 262
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+Y M + M + +VFDG +LP+K TE DR R E ++ ELL +G
Sbjct: 55 YVDYAMHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRDNRREA-SRRTGLELLKAG 110
>gi|336259943|ref|XP_003344770.1| EXO1 protein [Sordaria macrospora k-hell]
Length = 722
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
V++EDSDLLVFGAK+++ K+D G C ++R + + ++ L +TDA+FR+M I SGCD
Sbjct: 167 VVSEDSDLLVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCD 226
Query: 266 YWTGIKGMGLKKAKDYVFSIMDPD 289
Y + MGLK A + + P+
Sbjct: 227 YLDSLPSMGLKTAYRMIRKLKTPE 250
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ K+D G C ++R + + ++ L +TDA+FR+M I SGCDY + M
Sbjct: 175 LVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWTDAEFRHMAIFSGCDYLDSLPSM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKI 162
GLK A + + P E ++K+ GKI
Sbjct: 235 GLKTAYRMIRKLKTP--ERIVKKLQFDGKI 262
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+Y M + M + +VFDG +LP+K TE DR R E ++ ELL +G
Sbjct: 55 YVDYAMHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRDNRREA-SRRTGLELLKAG 110
>gi|307177310|gb|EFN66483.1| Transmembrane protein 35 [Camponotus floridanus]
Length = 156
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 39/45 (86%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RKEYVKYAKVFPL+ D KVP+KWYRR++GS+E+ICG +MA IP
Sbjct: 38 RKEYVKYAKVFPLSGTFDFKVPSKWYRRVVGSLEIICGLAMAIIP 82
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
Query: 367 FILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
F L+G D KVP+KWYRR++GS+E+ICG +MA IP
Sbjct: 48 FPLSGT--FDFKVPSKWYRRVVGSLEIICGLAMAIIP 82
>gi|449303621|gb|EMC99628.1| hypothetical protein BAUCODRAFT_136211 [Baudoinia compniacensis
UAMH 10762]
Length = 730
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +++EDSDLLVFGAK ++ KLD G C + R+ S ++ L +TD +FR M +
Sbjct: 162 GIISGIVSEDSDLLVFGAKCLLTKLDQYGECVMIRRQDFTSCREVSLVGWTDREFRMMSM 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI+G+G+K A
Sbjct: 222 LSGCDYLPGIEGLGVKTA 239
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD G C + R+ S ++ L +TD +FR M +LSGCDY GI+G+G+K A
Sbjct: 182 LLTKLDQYGECVMIRRQDFTSCREVSLVGWTDREFRMMSMLSGCDYLPGIEGLGVKTA-- 239
Query: 140 YVFSIMDPDFENALRKINVYGK 161
Y E A+R + GK
Sbjct: 240 YRLVRKHKAIEPAVRMLQFDGK 261
>gi|322796547|gb|EFZ19021.1| hypothetical protein SINV_05628 [Solenopsis invicta]
Length = 155
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 273 MGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFS 332
+G+ K ++ + D RK+YVKYAKVFPL+ LD KVP+KWYRR++GS+E+ICG +
Sbjct: 19 VGIMKLTSHISKDLHKDL--RKDYVKYAKVFPLSRTLDFKVPSKWYRRVVGSLEIICGLT 76
Query: 333 MATIP 337
MA IP
Sbjct: 77 MAIIP 81
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 375 LDMKVPAKWYRRIIGSIEVICGFSMATIP 403
LD KVP+KWYRR++GS+E+ICG +MA IP
Sbjct: 53 LDFKVPSKWYRRVVGSLEIICGLTMAIIP 81
>gi|312082984|ref|XP_003143672.1| XPG I-region family protein [Loa loa]
gi|307761164|gb|EFO20398.1| XPG I-region family protein [Loa loa]
Length = 609
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTD-AKFRYMCILSGC 264
V+TEDSDL+ FG +KII+K+D SG+C D+ LP L LA+ D KFR +CILSGC
Sbjct: 168 VVTEDSDLIAFGCEKIIFKMDPSGSCVIFDQNLLPRCLCRALAENFDFDKFRRICILSGC 227
Query: 265 DY-WTGIKGMGLKKA 278
DY G+ G+GL KA
Sbjct: 228 DYLQAGLPGVGLNKA 242
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTD-AKFRYMCILSGCDY-WTGIKGMGLKKA 137
II+K+D SG+C D+ LP L LA+ D KFR +CILSGCDY G+ G+GL KA
Sbjct: 183 IIFKMDPSGSCVIFDQNLLPRCLCRALAENFDFDKFRRICILSGCDYLQAGLPGVGLNKA 242
Query: 138 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+ + L ++ Y S +K+TK+F+
Sbjct: 243 AAFFAKTDGRNLYQILPRLPRYLNKNS-LKVTKQFI 277
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+ Y +KY+ LLA +I+VFDG+ LPAK+ T RR++ + HKQ+ LL G
Sbjct: 54 FYIRYVLKYVRALLAIGCHIILVFDGQMLPAKKETNSSRREKRDF-HKQRGDLLLSEG 110
>gi|452838210|gb|EME40151.1| hypothetical protein DOTSEDRAFT_158847, partial [Dothistroma
septosporum NZE10]
Length = 687
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D VI+EDSDLLVFG K ++ KLD G C ++R S ++ L ++D +FR M +
Sbjct: 162 GMIDGVISEDSDLLVFGVKCLLTKLDQYGECVMINRADFTSCREVSLVGWSDKEFRMMAM 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI MGLK A
Sbjct: 222 LSGCDYLPGIDKMGLKTA 239
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G C ++R S ++ L ++D +FR M +LSGCDY GI MGLK A
Sbjct: 182 LLTKLDQYGECVMINRADFTSCREVSLVGWSDKEFRMMAMLSGCDYLPGIDKMGLKTA 239
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
++++ + + ML+ +K +VFDG +LP+K TE +R R + K+ ELL G
Sbjct: 55 HIDFALHRVRMLIHFGVKPYIVFDGDYLPSKAHTESERAARRK-ESKRMGLELLRMGRPS 113
Query: 81 IYKLDL 86
L+L
Sbjct: 114 QAHLEL 119
>gi|327262075|ref|XP_003215851.1| PREDICTED: exonuclease 1-like [Anolis carolinensis]
Length = 810
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+ K+D GN +D+ +L K FT+ KFRY
Sbjct: 159 NKTGIVQSIITEDSDLLAFGCKKVFLKIDKLGNGLEIDQARL-GMCKQLGDVFTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
MCILSGCDY I G+GL KA + +PD
Sbjct: 218 MCILSGCDYLPSIHGIGLGKACKLLKIANNPDI 250
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ K+D GN +D+ +L K FT+ KFRYMCILSGCDY I G+GL KA
Sbjct: 182 VFLKIDKLGNGLEIDQARL-GMCKQLGDVFTEEKFRYMCILSGCDYLPSIHGIGLGKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD I V GK+G Y+K+
Sbjct: 241 LLKIANNPDI------IKVIGKMGQYLKMN 264
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMK ++MLL+ +K I+VFDG LP+K+ E+ RR++ + + K +LL G
Sbjct: 55 YVIYCMKLVDMLLSFGVKPILVFDGCTLPSKKEVEKSRREKRQT-NLLKGKQLLREG 110
>gi|170589924|ref|XP_001899723.1| XPG I-region family protein [Brugia malayi]
gi|158592849|gb|EDP31445.1| XPG I-region family protein [Brugia malayi]
Length = 603
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTD-AKFRYMCIL 261
A V+TEDSDL+ FG +KII+K+D +G+C D+ LP L LA+ D KFR +CIL
Sbjct: 165 AQAVVTEDSDLIAFGCEKIIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRRICIL 224
Query: 262 SGCDY-WTGIKGMGLKKA 278
SGCDY G+ G+GL KA
Sbjct: 225 SGCDYLQAGLPGVGLNKA 242
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTD-AKFRYMCILSGCDY-WTGIKGMGLKKA 137
II+K+D +G+C D+ LP L LA+ D KFR +CILSGCDY G+ G+GL KA
Sbjct: 183 IIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRRICILSGCDYLQAGLPGVGLNKA 242
Query: 138 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+ + L ++ Y S +K+TK+F+
Sbjct: 243 AAFFAKTNGRNLYQVLPRLPRYLNKNS-LKVTKQFI 277
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+ Y +KY+ LLA VI+VFDG+ LPAK+ T RR++ + HKQ+ L+ G
Sbjct: 54 FYIRYVLKYVKALLAIGCHVILVFDGQMLPAKKETNNSRREKRDF-HKQRGDLLMSEG 110
>gi|453080704|gb|EMF08754.1| PIN domain-like protein [Mycosphaerella populorum SO2202]
Length = 739
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 106/258 (41%), Gaps = 73/258 (28%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
++++ M + ML+ +K +VFDG +LP+K TE ++RA R + K L
Sbjct: 55 HIDFVMHRVRMLIHFGVKPYLVFDGDYLPSKAHTE---KERAARRKESKRVGL------- 104
Query: 81 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 140
M R PS ++ L K D
Sbjct: 105 -----------DMLRMGRPSQAQLELQKAVD----------------------------- 124
Query: 141 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIA 200
V +M + LRK++V + Y E S L+ + +
Sbjct: 125 VTPVMAREVIEELRKLDVEYVVAPY--------------------EADSQLAYLEKE--- 161
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + V++EDSDLLVFG ++ KLD G C ++R S + L ++D +FR M +
Sbjct: 162 GIINGVLSEDSDLLVFGVNCLLTKLDQFGECVMVNRADFTSVRDISLVGWSDKEFRMMAM 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI +GLK A
Sbjct: 222 LSGCDYLPGIDKIGLKTA 239
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD G C ++R S + L ++D +FR M +LSGCDY GI +GLK A
Sbjct: 182 LLTKLDQFGECVMVNRADFTSVRDISLVGWSDKEFRMMAMLSGCDYLPGIDKIGLKTA-- 239
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
Y E +R + GK+ K+ K++L
Sbjct: 240 YRLVRKHKTIEKIVRTVQFDGKM----KVPKDYL 269
>gi|402589958|gb|EJW83889.1| XPG I-region family protein [Wuchereria bancrofti]
Length = 608
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTD-AKFRYMCIL 261
A V+TEDSDL+ FG +KII+K+D +G+C D+ LP L LA+ D KFR +CIL
Sbjct: 165 AQAVVTEDSDLIAFGCEKIIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRRICIL 224
Query: 262 SGCDY-WTGIKGMGLKKA 278
SGCDY G+ G+GL KA
Sbjct: 225 SGCDYLQAGLPGVGLNKA 242
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTD-AKFRYMCILSGCDY-WTGIKGMGLKKA 137
II+K+D +G+C D+ LP L LA+ D KFR +CILSGCDY G+ G+GL KA
Sbjct: 183 IIFKMDPNGSCVIFDQSLLPKCLCRALAENFDFDKFRRICILSGCDYLQAGLPGVGLNKA 242
Query: 138 KDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+ + L ++ Y S +K+TK+F+
Sbjct: 243 AAFFAKTNGRNLYQVLPRLPRYLNKNS-LKVTKQFI 277
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+ Y +KY+ LLA VI+VFDG+ LPAK+ T RR++ + HKQ+ L+ G
Sbjct: 54 FYIRYVLKYVKALLAIGCHVILVFDGQMLPAKKETNSSRREKRDF-HKQRGDLLMSEG 110
>gi|406861963|gb|EKD15015.1| putative exonuclease [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 776
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
ERN G D +++EDSDLLVFGAK ++ KLD GNC +++ + ++ L +++ +F
Sbjct: 159 ERN--GVIDGILSEDSDLLVFGAKCLLTKLDQYGNCIEINKADFSACREITLTGWSEKEF 216
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
R M ILSGCDY I MGLK A
Sbjct: 217 RTMAILSGCDYLASINNMGLKTA 239
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD GNC +++ + ++ L +++ +FR M ILSGCDY I MGLK A
Sbjct: 182 LLTKLDQYGNCIEINKADFSACREITLTGWSEKEFRTMAILSGCDYLASINNMGLKTA 239
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+V++ M + ML + M+FDG +LP+K ATE DR KR E K+ ELL++G
Sbjct: 55 FVDFAMHRVRMLQHFGVIPYMIFDGDYLPSKAATEADRSKRRE-ESKRAGMELLNAG 110
>gi|260943253|ref|XP_002615925.1| hypothetical protein CLUG_04807 [Clavispora lusitaniae ATCC 42720]
gi|238851215|gb|EEQ40679.1| hypothetical protein CLUG_04807 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLLVFG ++++ KL SG C ++R + +P LA +T A++R +
Sbjct: 162 GAVDAILSEDSDLLVFGCRRLVTKLSDSGGCVEINRARFSQVRAVPRLADYTPAQWRAVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
ILSGCDY G+ G+GLK A
Sbjct: 222 ILSGCDYTKGVPGVGLKTA 240
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KL SG C ++R + +P LA +T A++R + ILSGCDY G+ G+GLK A
Sbjct: 182 LVTKLSDSGGCVEINRARFSQVRAVPRLADYTPAQWRAVAILSGCDYTKGVPGVGLKTA 240
>gi|242024746|ref|XP_002432787.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518296|gb|EEB20049.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 166
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 282 VFSIMDPDFEN--RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
V S++ D RKEYVKYAKVFPL+ LD+K+P KWYRRI+GS+E+ICG +++ +P N
Sbjct: 25 VTSVISKDLHKDLRKEYVKYAKVFPLSEALDIKIPPKWYRRIVGSMEIICGLALSLVPSN 84
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 26/29 (89%)
Query: 375 LDMKVPAKWYRRIIGSIEVICGFSMATIP 403
LD+K+P KWYRRI+GS+E+ICG +++ +P
Sbjct: 54 LDIKIPPKWYRRIVGSMEIICGLALSLVP 82
>gi|388854880|emb|CCF51561.1| related to EXO1-exonuclease which interacts with Msh2p [Ustilago
hordei]
Length = 813
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D V+TEDSDLLVFG +++KLD +GN + +E+ + ++ + +T +FR M I
Sbjct: 162 GAIDAVLTEDSDLLVFGCNTVLFKLDQAGNAVEIKQERFWTNRQITFSGWTAVEFRQMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I GMGLK A
Sbjct: 222 LSGCDYLPSIVGMGLKNA 239
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+++++KLD +GN + +E+ + ++ + +T +FR M ILSGCDY I GMGLK A
Sbjct: 180 NTVLFKLDQAGNAVEIKQERFWTNRQITFSGWTAVEFRQMAILSGCDYLPSIVGMGLKNA 239
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAE--IRHKQKAAE 72
Y++Y + I ML IK +VFDG LPAK TE+DR KR+E R +Q AE
Sbjct: 55 YISYALSRIGMLQHFGIKPYLVFDGDKLPAKTHTEDDRESKRSENLARAQQLEAE 109
>gi|58262688|ref|XP_568754.1| exonuclease [Cryptococcus neoformans var. neoformans JEC21]
gi|57223404|gb|AAW41447.1| exonuclease, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1012
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 24/140 (17%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS-- 78
+V Y M + L H I+ +VFDG LPAK+ TE R K + + +KA L G
Sbjct: 27 FVEYAMYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAK-TRLENLEKARSLEAQGRMK 85
Query: 79 ---------------------SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 117
+I+KLD G C ++ R++L + P+ +TD FR M
Sbjct: 86 EAKEAYTRCVDVTPEMAYQLIKVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRM 145
Query: 118 CILSGCDYWTGIKGMGLKKA 137
+LSGCDY I G+G+K A
Sbjct: 146 AMLSGCDYLDSIPGIGIKTA 165
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 220 KIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
K+I+KLD G C ++ R++L + P+ +TD FR M +LSGCDY I G+G+K A
Sbjct: 107 KVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRMAMLSGCDYLDSIPGIGIKTA 165
>gi|47207240|emb|CAF92263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1635
Score = 79.0 bits (193), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
A VITEDSDLL FG KK+I K+D GN +D+ L + FT+ KFR+MCILS
Sbjct: 164 AQAVITEDSDLLAFGCKKVILKMDKHGNGLEIDQNNLGRCRSLGNV-FTEEKFRHMCILS 222
Query: 263 GCDYWTGIKGMGLKKAKDYVFSIMDPD 289
GCDY + G+GL KA + +PD
Sbjct: 223 GCDYLPSLHGIGLGKACKLLRLAKEPD 249
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCMK+++MLL ++ I+VFDGR+LP+K+ E+ RR+R + QK +LL G
Sbjct: 55 YVWYCMKFVDMLLTFGVRPILVFDGRNLPSKQEVEKARRER-RTANLQKGRQLLREG 110
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ L + FT+ KFR+MCILSGCDY +
Sbjct: 172 SDLLAFGCKKVILKMDKHGNGLEIDQNNLGRCRSLGNV-FTEEKFRHMCILSGCDYLPSL 230
Query: 130 KGMGLKKAKDYVFSIMDPD 148
G+GL KA + +PD
Sbjct: 231 HGIGLGKACKLLRLAKEPD 249
>gi|19112842|ref|NP_596050.1| exonuclease I Exo1 [Schizosaccharomyces pombe 972h-]
gi|1706728|sp|P53695.1|EXO1_SCHPO RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I
gi|703466|gb|AAC41648.1| exonuclease [Schizosaccharomyces pombe]
gi|4007793|emb|CAA22433.1| exonuclease I Exo1 [Schizosaccharomyces pombe]
Length = 571
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D +ITEDSD+LVFGA+ +++K+D GNC + R + +A + L + K R+M I SG
Sbjct: 165 DGIITEDSDMLVFGAQTVLFKMDGFGNCITIRRNDIANAQDLNL-RLPIEKLRHMAIFSG 223
Query: 264 CDYWTGIKGMGLKKAKDYVFSIMDP 288
CDY G+ GMGLK A Y+ +P
Sbjct: 224 CDYTDGVAGMGLKTALRYLQKYPEP 248
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++++K+D GNC + R + +A + L + K R+M I SGCDY G+ GM
Sbjct: 175 LVFGAQTVLFKMDGFGNCITIRRNDIANAQDLNL-RLPIEKLRHMAIFSGCDYTDGVAGM 233
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
GLK A Y+ +P A+R + + + V KEF
Sbjct: 234 GLKTALRYLQKYPEP--RAAIRAMRLDKSLKVPVSFEKEF 271
>gi|302915703|ref|XP_003051662.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732601|gb|EEU45949.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 743
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+I++DSDLLVFGAKK++ KLD GNC ++R+ + ++ L ++D +FR M ILSGCD
Sbjct: 167 IISDDSDLLVFGAKKLLTKLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAILSGCD 226
Query: 266 YWTGIKGMGLKKA 278
Y G+ +GLK A
Sbjct: 227 YLDGLPSVGLKTA 239
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD GNC ++R+ + ++ L ++D +FR M ILSGCDY G+ +
Sbjct: 175 LVFGAKKLLTKLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAILSGCDYLDGLPSV 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
GLK A + P E +R + GK +I++ +LT
Sbjct: 235 GLKTAYRMLRKTKAP--ERVVRMLQFQGK-----RISENYLT 269
>gi|310796237|gb|EFQ31698.1| hypothetical protein GLRG_06673 [Glomerella graminicola M1.001]
Length = 746
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
IAG +++EDSDLLVFG K+++ KLD GNC ++R + ++ L +TD FR M
Sbjct: 105 IAG----ILSEDSDLLVFGCKRLLTKLDQYGNCIEINRRDFCAVREVSLTGWTDTDFRRM 160
Query: 259 CILSGCDYWTGIKGMGLKKA 278
I SGCDY GI MGLK A
Sbjct: 161 AIFSGCDYLEGINNMGLKTA 180
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD GNC ++R + ++ L +TD FR M I SGCDY GI MGLK A
Sbjct: 123 LLTKLDQYGNCIEINRRDFCAVREVSLTGWTDTDFRRMAIFSGCDYLEGINNMGLKTA 180
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 26 MKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSIIYKLD 85
M + ML + +VFDG LP+K ATE R KR E K+ A ELL +G S L+
Sbjct: 1 MHRVRMLKHFGVTPYLVFDGDFLPSKAATEGSRAKRRE-DSKKSAMELLKAGKSSQAALE 59
Query: 86 L 86
Sbjct: 60 F 60
>gi|146416653|ref|XP_001484296.1| hypothetical protein PGUG_03677 [Meyerozyma guilliermondii ATCC
6260]
Length = 635
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG +++I KL+ G C +DR P K+P L+ +T + R +
Sbjct: 213 GAVDGILSEDSDLLIFGCQRLITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVA 272
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+L+GCDY GI G+GLK A
Sbjct: 273 MLAGCDYTKGIPGIGLKTA 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
+I KL+ G C +DR P K+P L+ +T + R + +L+GCDY GI G+GLK A
Sbjct: 233 LITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVAMLAGCDYTKGIPGIGLKTAF 292
Query: 139 DYVFSIMDPDFENALRKINVYGKI 162
V+ D + L ++ GK+
Sbjct: 293 TLVWK--HGDLNSVLSALDAEGKV 314
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIRHKQKAAELLHSG 77
YVN +K ++ML ++ +VFDG +LP K T ++RR KR E + QKA LL G
Sbjct: 106 YVNSVIKKVDMLRHFGVEPYLVFDGAYLPTKAETAKERRIKREEAQ--QKADLLLKRG 161
>gi|190347330|gb|EDK39579.2| hypothetical protein PGUG_03677 [Meyerozyma guilliermondii ATCC
6260]
Length = 635
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG +++I KL+ G C +DR P K+P L+ +T + R +
Sbjct: 213 GAVDGILSEDSDLLIFGCQRLITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVA 272
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+L+GCDY GI G+GLK A
Sbjct: 273 MLAGCDYTKGIPGIGLKTA 291
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
+I KL+ G C +DR P K+P L+ +T + R + +L+GCDY GI G+GLK A
Sbjct: 233 LITKLNDYGECVVIDRANFPKVKKIPQLSSYTQQQLRLVAMLAGCDYTKGIPGIGLKTA- 291
Query: 139 DYVFSIMDPDFENALRKINVYGKI 162
+ D + L ++ GK+
Sbjct: 292 -FTLVWKHGDLNSVLSALDAEGKV 314
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIRHKQKAAELLHSG 77
YVN +K ++ML ++ +VFDG +LP K T ++RR KR E + QKA LL G
Sbjct: 106 YVNSVIKKVDMLRHFGVEPYLVFDGAYLPTKAETAKERRIKREEAQ--QKADLLLKRG 161
>gi|393228982|gb|EJD36614.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 357
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP--LAKFTDAKFRYM 258
G D ++TEDSDLLVFGA++ ++KLD SG C + R S P L + D +FR+M
Sbjct: 162 GLIDAILTEDSDLLVFGARQALFKLDSSGTCVSVCRSDFGSPALHPNTLVGWGDDQFRWM 221
Query: 259 CILSGCDYWTGIKGMGLKKA 278
+L+GCDY I GMGLK A
Sbjct: 222 AMLAGCDYLDSIPGMGLKTA 241
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMP--LAKFTDAKFRYMCILSGCDYWTGIK 130
L+ ++KLD SG C + R S P L + D +FR+M +L+GCDY I
Sbjct: 175 LVFGARQALFKLDSSGTCVSVCRSDFGSPALHPNTLVGWGDDQFRWMAMLAGCDYLDSIP 234
Query: 131 GMGLKKA 137
GMGLK A
Sbjct: 235 GMGLKTA 241
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIR---HKQKAAELLHSG 77
YV + M+ + ++ H + +VFDG LPAK TEE R+++ E AA+ HS
Sbjct: 55 YVEWAMQRVRLMQHHHVMPYVVFDGGPLPAKLGTEEKRQQQREANLSTANSLAAQGHHSQ 114
Query: 78 SSIIY 82
+ +Y
Sbjct: 115 ARDMY 119
>gi|340966712|gb|EGS22219.1| 5'->3' double-stranded DNA exonuclease-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 743
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+++EDSDLLVFGAK+++ KLD G C ++R+ ++ L +TD++FR+M I SGCD
Sbjct: 167 IVSEDSDLLVFGAKRLLTKLDQHGQCVEINRKDFCLVREISLTGWTDSEFRHMAIFSGCD 226
Query: 266 YWTGIKGMGLKKA 278
Y G+ +GLK A
Sbjct: 227 YLEGLSNIGLKTA 239
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KLD G C ++R+ ++ L +TD++FR+M I SGCDY G+ +
Sbjct: 175 LVFGAKRLLTKLDQHGQCVEINRKDFCLVREISLTGWTDSEFRHMAIFSGCDYLEGLSNI 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + M + +VFDG LP+K TEE R+KR E K+ ELL +G
Sbjct: 55 YVDFAMHRVKMFRYFGVTPYIVFDGDFLPSKAKTEESRKKRRE-EAKKVGLELLRAG 110
>gi|410929919|ref|XP_003978346.1| PREDICTED: exonuclease 1-like [Takifugu rubripes]
Length = 740
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
A VITEDSDLL FG KK+I K+D GN +D+ L + FT+ KFR+MCILS
Sbjct: 164 AQAVITEDSDLLAFGCKKVILKMDKHGNGLEIDQNNLGRCRALGNI-FTEEKFRHMCILS 222
Query: 263 GCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
GCDY + G+GL KA + +PD
Sbjct: 223 GCDYLPSLHGIGLGKACKLLRLAKEPDI 250
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ L + FT+ KFR+MCILSGCDY + G+GL KA
Sbjct: 182 VILKMDKHGNGLEIDQNNLGRCRALGNI-FTEEKFRHMCILSGCDYLPSLHGIGLGKACK 240
Query: 140 YVFSIMDPDFENALRKINVYGKI 162
+ +PD +RK+ Y K+
Sbjct: 241 LLRLAKEPDITKVIRKMAQYLKM 263
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKE 52
YV YCM+++ MLL +IK I+VFDGR+LP+K+
Sbjct: 55 YVWYCMRFVEMLLTFRIKPILVFDGRNLPSKQ 86
>gi|452978258|gb|EME78022.1| hypothetical protein MYCFIDRAFT_116032, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 527
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D VI+EDSDLLVFG + ++ KLD G C + R S ++ L +TD +FR M +
Sbjct: 158 GIIDGVISEDSDLLVFGVQCLLTKLDQYGECVMISRADFTSCREISLVGWTDREFRMMAM 217
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI MGLK A
Sbjct: 218 LSGCDYLPGIDKMGLKTA 235
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD G C + R S ++ L +TD +FR M +LSGCDY GI MGLK A
Sbjct: 178 LLTKLDQYGECVMISRADFTSCREISLVGWTDREFRMMAMLSGCDYLPGIDKMGLKTA-- 235
Query: 140 YVFSIMDPDFENALRKINVYGKI 162
Y + +R + GK+
Sbjct: 236 YRLVRKHKTLDRVVRTVQFDGKM 258
>gi|116203679|ref|XP_001227650.1| hypothetical protein CHGG_09723 [Chaetomium globosum CBS 148.51]
gi|88175851|gb|EAQ83319.1| hypothetical protein CHGG_09723 [Chaetomium globosum CBS 148.51]
Length = 1331
Score = 78.2 bits (191), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 51/73 (69%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+++EDSDLLVFGAK+++ K+D G+C ++R + ++ L +TD +FR+M I SGCD
Sbjct: 167 IVSEDSDLLVFGAKRLLTKMDQHGHCIEINRRDFCAVREISLTGWTDNEFRHMAIFSGCD 226
Query: 266 YWTGIKGMGLKKA 278
Y G+ +GLK A
Sbjct: 227 YLDGVNNIGLKTA 239
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ K+D G+C ++R + ++ L +TD +FR+M I SGCDY G+ +
Sbjct: 175 LVFGAKRLLTKMDQHGHCIEINRRDFCAVREISLTGWTDNEFRHMAIFSGCDYLDGVNNI 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|50553030|ref|XP_503925.1| YALI0E14014p [Yarrowia lipolytica]
gi|49649794|emb|CAG79518.1| YALI0E14014p [Yarrowia lipolytica CLIB122]
Length = 546
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF-RYM 258
AGYA +I+EDSDL+V+GA+ ++ KLD SG C +D ++ S + L ++ RYM
Sbjct: 161 AGYATGIISEDSDLVVYGAQMLVTKLDPSGGCVTVDGSRISSCSDLELGSEVPLEYLRYM 220
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
ILSGCDY G+ +G K+A Y+ P+
Sbjct: 221 AILSGCDYCDGVPNVGPKRAARYIRRWQTPE 251
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF-RYMCILSGCDYWTGIKGMGLKKAK 138
++ KLD SG C +D ++ S + L ++ RYM ILSGCDY G+ +G K+A
Sbjct: 182 LVTKLDPSGGCVTVDGSRISSCSDLELGSEVPLEYLRYMAILSGCDYCDGVPNVGPKRAA 241
Query: 139 DYVFSIMDPD 148
Y+ P+
Sbjct: 242 RYIRRWQTPE 251
>gi|440633917|gb|ELR03836.1| hypothetical protein GMDG_01365 [Geomyces destructans 20631-21]
Length = 775
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +++EDSDLLVFGAK ++ KLD GNC +++ + + LA +++ +FR M I
Sbjct: 162 GVIDGILSEDSDLLVFGAKCLLTKLDQYGNCIEINQADFSACRDINLAGWSEKEFRQMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + I MGLK A
Sbjct: 222 LSGCDYLSSITNMGLKTA 239
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD GNC +++ + + LA +++ +FR M ILSGCDY + I MGLK A
Sbjct: 182 LLTKLDQYGNCIEINQADFSACRDINLAGWSEKEFRQMAILSGCDYLSSITNMGLKTA 239
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
+V++ M + ML + ++FDG +LP+K ATE DR KR K ELL++G
Sbjct: 55 FVDFAMHRVRMLQHFGVIPFLIFDGDYLPSKAATEADRNKR-RAASKTLGLELLNAGKVA 113
Query: 81 IYKLDL 86
L+L
Sbjct: 114 QANLEL 119
>gi|47087335|ref|NP_998634.1| exonuclease 1 [Danio rerio]
gi|82177106|sp|Q803U7.1|EXO1_DANRE RecName: Full=Exonuclease 1; AltName: Full=Exonuclease I
gi|28278337|gb|AAH44187.1| Zgc:55521 [Danio rerio]
Length = 806
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNC-----CFMDREKLPSALKMPLAKFTD 252
N + A VITEDSDLL FG KK+I K+D GN C + R K + FT+
Sbjct: 159 NKSDIAQAVITEDSDLLAFGCKKVILKMDKQGNGLEIEQCHLGRCKSLGNI------FTE 212
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
KFRYMCILSGCDY + G+GL KA + +PD
Sbjct: 213 EKFRYMCILSGCDYLQSLYGIGLGKACKLLRMANNPDI 250
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+YCMK+++MLL+ +K I+VFDGR+LP+K+ E+ RR+R + + QK +LL G
Sbjct: 55 YVSYCMKFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQA-NLQKGKQLLREG 110
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 80 IIYKLDLSGNC-----CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 134
+I K+D GN C + R K + FT+ KFRYMCILSGCDY + G+GL
Sbjct: 182 VILKMDKQGNGLEIEQCHLGRCKSLGNI------FTEEKFRYMCILSGCDYLQSLYGIGL 235
Query: 135 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKI 168
KA + +PD + V K+G Y+K+
Sbjct: 236 GKACKLLRMANNPDI------LKVIKKMGQYLKM 263
>gi|440803854|gb|ELR24737.1| XPG Iregion domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 832
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY VI+EDSDLL FG K++++K+D GN + L + FT FR MCI
Sbjct: 131 GYVHSVISEDSDLLPFGCKRVLFKMDGDGNGKEIQLSDLGQNTPLRFHNFTHDMFRQMCI 190
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I G+G+KKA
Sbjct: 191 LSGCDYLASITGLGVKKA 208
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK- 138
+++K+D GN + L + FT FR MCILSGCDY I G+G+KKA
Sbjct: 151 VLFKMDGDGNGKEIQLSDLGQNTPLRFHNFTHDMFRQMCILSGCDYLASITGLGVKKAHG 210
Query: 139 --------DYVFS--------IMDPDFENALRK 155
D VF I+ P++E A +
Sbjct: 211 LLNKYRTMDRVFRFLKNDRSFIVPPEYEEAFER 243
>gi|451855203|gb|EMD68495.1| hypothetical protein COCSADRAFT_33392 [Cochliobolus sativus ND90Pr]
Length = 725
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + V++EDSDLLVFG K +I KLD G C ++R + ++ ++DA FR M I
Sbjct: 162 GIINGVLSEDSDLLVFGVKCLITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI G+GLK A
Sbjct: 222 LSGCDYLPGIGGLGLKTA 239
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KLD G C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 182 LITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 239
>gi|452004232|gb|EMD96688.1| hypothetical protein COCHEDRAFT_1220269 [Cochliobolus
heterostrophus C5]
Length = 724
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + V++EDSDLLVFG K +I KLD G C ++R + ++ ++DA FR M I
Sbjct: 162 GIINGVLSEDSDLLVFGVKCLITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI G+GLK A
Sbjct: 222 LSGCDYLPGIGGLGLKTA 239
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KLD G C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 182 LITKLDKYGECIEVNRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 239
>gi|156545742|ref|XP_001605251.1| PREDICTED: transmembrane protein 35-like [Nasonia vitripennis]
Length = 156
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 273 MGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFS 332
+G+ K Y+ + D RKEYVKYAKVFPL +D KVP+KWYRR++G++E++CG +
Sbjct: 20 VGIMKLTSYISKDLHKDL--RKEYVKYAKVFPLANAMDFKVPSKWYRRVVGTLELVCGAA 77
Query: 333 MATIP 337
MA IP
Sbjct: 78 MAIIP 82
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 26/29 (89%)
Query: 375 LDMKVPAKWYRRIIGSIEVICGFSMATIP 403
+D KVP+KWYRR++G++E++CG +MA IP
Sbjct: 54 MDFKVPSKWYRRVVGTLELVCGAAMAIIP 82
>gi|320167587|gb|EFW44486.1| exodeoxyribonuclease 1 [Capsaspora owczarzaki ATCC 30864]
Length = 522
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
Y VI+EDSDLL+FG ++++YK+D G +D++ + L++ L +T + R MCI
Sbjct: 111 NYIAAVISEDSDLLLFGCQRVLYKMDKFGEGVLIDQKDFANCLELDLQNWTLDQLRRMCI 170
Query: 261 LSGCDYWTGIKGMGLKKAK 279
LSGCDY I G+GLK A
Sbjct: 171 LSGCDYLDSISGIGLKTAN 189
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
LL ++YK+D G +D++ + L++ L +T + R MCILSGCDY I G+
Sbjct: 124 LLFGCQRVLYKMDKFGEGVLIDQKDFANCLELDLQNWTLDQLRRMCILSGCDYLDSISGI 183
Query: 133 GLKKAK 138
GLK A
Sbjct: 184 GLKTAN 189
>gi|196007442|ref|XP_002113587.1| hypothetical protein TRIADDRAFT_26121 [Trichoplax adhaerens]
gi|190583991|gb|EDV24061.1| hypothetical protein TRIADDRAFT_26121 [Trichoplax adhaerens]
Length = 326
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
A D VITEDSDLLVFG KK+++KLD +G + ++L + L FR++C
Sbjct: 166 ADLVDAVITEDSDLLVFGCKKVLFKLDPNGRGIEIRLDRLREVKDIDLNGVDHEAFRHIC 225
Query: 260 ILSGCDYWTGIKGMGLKKA 278
ILSGCDY I GMGLK A
Sbjct: 226 ILSGCDYLPSIPGMGLKTA 244
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
+YVNYCMK I ML+ +K IMVFDG HLP+K EE+R+ + +K K E L
Sbjct: 53 RMYVNYCMKRIEMLINFNVKPIMVFDGGHLPSKMQKEEERKLNRQF-NKSKGIEYLRQDK 111
Query: 79 SI 80
I
Sbjct: 112 YI 113
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ +++KLD +G + ++L + L FR++CILSGCDY I GM
Sbjct: 180 LVFGCKKVLFKLDPNGRGIEIRLDRLREVKDIDLNGVDHEAFRHICILSGCDYLPSIPGM 239
Query: 133 GLKKA 137
GLK A
Sbjct: 240 GLKTA 244
>gi|195442862|ref|XP_002069165.1| GK24408 [Drosophila willistoni]
gi|194165250|gb|EDW80151.1| GK24408 [Drosophila willistoni]
Length = 159
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 54/83 (65%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFNMKVPAKWYRRIIG 352
R EYVKYAKVFPLTA+ +KVP+KWYRR IG +E++CG +MA IP++ A ++
Sbjct: 41 RTEYVKYAKVFPLTALFGLKVPSKWYRRTIGILEILCGLAMALIPYHKVKNAANITLLVL 100
Query: 353 SIEVICGFSMATIPFILAGKAIL 375
+ I M + PF +G A++
Sbjct: 101 MVLGIYQHWMVSDPFERSGPALV 123
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +KVP+KWYRR IG +E++CG +MA IP+
Sbjct: 55 ALFGLKVPSKWYRRTIGILEILCGLAMALIPY 86
>gi|396482491|ref|XP_003841474.1| similar to exonuclease [Leptosphaeria maculans JN3]
gi|312218049|emb|CBX97995.1| similar to exonuclease [Leptosphaeria maculans JN3]
Length = 725
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + V++EDSDLLVFG K ++ KLD G+C ++R + ++ ++DA FR M I
Sbjct: 162 GIINGVLSEDSDLLVFGVKCLLTKLDKYGDCIEINRNHFTACREVSFVGWSDADFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY GI G+GLK A
Sbjct: 222 LSGCDYLPGIGGLGLKTA 239
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KLD G+C ++R + ++ ++DA FR M ILSGCDY GI G+GLK A
Sbjct: 182 LLTKLDKYGDCIEINRNHFTACREVSFVGWSDADFRRMAILSGCDYLPGIGGLGLKTA 239
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIRHKQKAAELLHSGSS 79
YV++ M + ML+ + +VFDG +LP+K +TE+DR+ KR E K+ ELL G
Sbjct: 55 YVDFVMNRVRMLIHFGVTPYLVFDGDNLPSKASTEKDRKEKRKE--GKRLGLELLKVGKV 112
Query: 80 IIYKLDL 86
L+L
Sbjct: 113 AQAHLEL 119
>gi|154294321|ref|XP_001547602.1| hypothetical protein BC1G_13933 [Botryotinia fuckeliana B05.10]
Length = 768
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +++EDSDLLVFGAK ++ KLD GNC +++ + + L ++DA+FR M I
Sbjct: 162 GVIDGILSEDSDLLVFGAKCLLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLPSMSNMGLKTA 239
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCM + MLL + ++FDG +LP+K ATE+DR KR + K+ ELL++G
Sbjct: 55 YVEYCMHRVRMLLHFGVTPYLIFDGDYLPSKAATEKDREKRRK-DSKRLGQELLNAG 110
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD GNC +++ + + L ++DA+FR M ILSGCDY + MGLK A
Sbjct: 182 LLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAILSGCDYLPSMSNMGLKTA-- 239
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
Y E LR I GK + K +L S
Sbjct: 240 YRLIRKHKTIEKVLRMIQFDGKF----HVPKNYLES 271
>gi|347827667|emb|CCD43364.1| similar to exonuclease [Botryotinia fuckeliana]
Length = 768
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +++EDSDLLVFGAK ++ KLD GNC +++ + + L ++DA+FR M I
Sbjct: 162 GVIDGILSEDSDLLVFGAKCLLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + MGLK A
Sbjct: 222 LSGCDYLPSMSNMGLKTA 239
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV YCM + MLL + ++FDG +LP+K ATE+DR KR + K+ ELL++G
Sbjct: 55 YVEYCMHRVRMLLHFGVTPYLIFDGDYLPSKAATEKDREKRRK-DSKRLGQELLNAG 110
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD GNC +++ + + L ++DA+FR M ILSGCDY + MGLK A
Sbjct: 182 LLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAILSGCDYLPSMSNMGLKTA-- 239
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
Y E LR I GK + K +L S
Sbjct: 240 YRLIRKHKTIEKVLRMIQFDGKF----HVPKNYLES 271
>gi|168002170|ref|XP_001753787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695194|gb|EDQ81539.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 114/303 (37%), Gaps = 83/303 (27%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
Y++YCM +NML ++ ++VFDG LP K E KRA R
Sbjct: 55 YIDYCMHRVNMLRHFGLQPVLVFDGGGLPMKSDQE---MKRARSR--------------- 96
Query: 81 IYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+E L AL+ L FT A C D I
Sbjct: 97 --------------KENLERALEHERLGNFTAA---MQCYQRAVDITPAI---------- 129
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNI 199
F ++ LR+ NV + Y + A F ARN
Sbjct: 130 -AFRLI-----KVLRQENVEYVVAPY--------EADAQMAFLARN-------------- 161
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
G+ D VITEDSDL+ +G +I +K+D G + + + F+ MC
Sbjct: 162 -GHVDLVITEDSDLIAYGCPQIFFKMDKYGQGVGFQFSDITANKDIDFNNFSRQMILEMC 220
Query: 260 ILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWYR 319
I+SGCDY + GMG+KKA + + K Y+K K + +L + + +R
Sbjct: 221 IMSGCDYLPSLPGMGVKKAHGLM--------KRFKTYIKVMKHLKFSGVLIDEQYEQGFR 272
Query: 320 RII 322
R I
Sbjct: 273 RAI 275
>gi|388854492|emb|CCF51879.1| related to EXO1-exonuclease which interacts with Msh2p [Ustilago
hordei]
Length = 814
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D V+ EDSDLLVFG +++KLD +GN + +E+ + ++ L+ +T +FR M I
Sbjct: 161 GAIDAVLMEDSDLLVFGCNTVLFKLDQAGNAVEIKQERF-TNRQIALSGWTAVEFRQMAI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I GMGLK A
Sbjct: 220 LSGCDYLPSIVGMGLKNA 237
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+++++KLD +GN + +E+ + ++ L+ +T +FR M ILSGCDY I GMGLK A
Sbjct: 179 NTVLFKLDQAGNAVEIKQERF-TNRQIALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNA 237
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE--IRHKQKAAE 72
Y++Y + I ML IK +VFDG LPAK TE+D KR+E R +Q AE
Sbjct: 55 YISYALSRIGMLQHFGIKPYLVFDGDKLPAKTHTEDDESKRSENLARAQQLEAE 108
>gi|398390271|ref|XP_003848596.1| hypothetical protein MYCGRDRAFT_63697, partial [Zymoseptoria
tritici IPO323]
gi|339468471|gb|EGP83572.1| hypothetical protein MYCGRDRAFT_63697 [Zymoseptoria tritici IPO323]
Length = 504
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 49/82 (59%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G V++EDSDLLVFG K ++ KLD G C ++R S + L + D +FR M +
Sbjct: 162 GKISGVLSEDSDLLVFGVKCLLTKLDQYGECIMVNRADFTSCRDISLVGWADKEFRIMAM 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY GI MGLK A YV
Sbjct: 222 LSGCDYLPGIDKMGLKTAYRYV 243
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD G C ++R S + L + D +FR M +LSGCDY GI MGLK A
Sbjct: 182 LLTKLDQYGECIMVNRADFTSCRDISLVGWADKEFRIMAMLSGCDYLPGIDKMGLKTAYR 241
Query: 140 YV 141
YV
Sbjct: 242 YV 243
>gi|194747091|ref|XP_001955986.1| GF24822 [Drosophila ananassae]
gi|190623268|gb|EDV38792.1| GF24822 [Drosophila ananassae]
Length = 159
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +KVP+KWYRR +G +E++CG +MA IP++
Sbjct: 41 RTEYVKYAKVFPLTALFGLKVPSKWYRRTVGILEIVCGLAMALIPYH 87
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +KVP+KWYRR +G +E++CG +MA IP+
Sbjct: 55 ALFGLKVPSKWYRRTVGILEIVCGLAMALIPY 86
>gi|91082177|ref|XP_971147.1| PREDICTED: similar to AGAP007501-PA [Tribolium castaneum]
gi|270007236|gb|EFA03684.1| hypothetical protein TcasGA2_TC013786 [Tribolium castaneum]
Length = 153
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 273 MGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFS 332
+G K Y+ + D RKEYVKYAKVFP + LD K+P+KWYRR +G++E++CG +
Sbjct: 20 VGFIKLSSYISKDLHKDL--RKEYVKYAKVFPFSEALDFKIPSKWYRRTVGTLEIVCGIA 77
Query: 333 MATIPFNMKV 342
MA +P N KV
Sbjct: 78 MAFVP-NHKV 86
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 375 LDMKVPAKWYRRIIGSIEVICGFSMATIP 403
LD K+P+KWYRR +G++E++CG +MA +P
Sbjct: 54 LDFKIPSKWYRRTVGTLEIVCGIAMAFVP 82
>gi|336467245|gb|EGO55409.1| hypothetical protein NEUTE1DRAFT_147941 [Neurospora tetrasperma
FGSC 2508]
gi|350288128|gb|EGZ69364.1| hypothetical protein NEUTE2DRAFT_94431 [Neurospora tetrasperma FGSC
2509]
Length = 758
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+++EDSDLLVFGAK+++ K+D G C ++R + + ++ L ++DA+FR M I SGCD
Sbjct: 167 IVSEDSDLLVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCD 226
Query: 266 YWTGIKGMGLKKA 278
Y + MGL+ A
Sbjct: 227 YLDSLPSMGLRTA 239
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ K+D G C ++R + + ++ L ++DA+FR M I SGCDY + M
Sbjct: 175 LVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCDYLDSLPSM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKI 162
GL+ A + + P E ++K+ GKI
Sbjct: 235 GLRTAYRMIRKLKTP--ERIVKKLQFDGKI 262
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+Y M + M + +VFDG +LP+K TE DR R E+ K ELL +G
Sbjct: 55 YVDYAMHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRENRREVSRK-TGLELLKAG 110
>gi|85092799|ref|XP_959551.1| hypothetical protein NCU06089 [Neurospora crassa OR74A]
gi|28920991|gb|EAA30315.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 758
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+++EDSDLLVFGAK+++ K+D G C ++R + + ++ L ++DA+FR M I SGCD
Sbjct: 167 IVSEDSDLLVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCD 226
Query: 266 YWTGIKGMGLKKAKDYVFSIMDPD 289
Y + MGL+ A + + P+
Sbjct: 227 YLDSLPSMGLRTAYRMIRKLKTPE 250
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ K+D G C ++R + + ++ L ++DA+FR M I SGCDY + M
Sbjct: 175 LVFGAKRLLTKMDQYGQCIEINRSQFCAVREISLTGWSDAEFRQMAIFSGCDYLDSLPSM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKI 162
GL+ A + + P E ++K+ GKI
Sbjct: 235 GLRTAYRMIRKLKTP--ERIVKKLQFDGKI 262
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+Y M + M + +VFDG +LP+K TE DR R E K ELL +G
Sbjct: 55 YVDYAMHRVKMFKHFGVTPYVVFDGDYLPSKAKTELDRESRREASRK-TGLELLKAG 110
>gi|171679457|ref|XP_001904675.1| hypothetical protein [Podospora anserina S mat+]
gi|170939354|emb|CAP64582.1| unnamed protein product [Podospora anserina S mat+]
Length = 719
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +++EDSD+LVFGA++++ K+D G C + R+ ++ L +TDA+FR+M I
Sbjct: 162 GVISGIVSEDSDMLVFGAQRLLTKMDQHGQCVEIRRKDFCLVREISLTGWTDAEFRHMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + +GLK A
Sbjct: 222 LSGCDYLGAVNNIGLKTA 239
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ K+D G C + R+ ++ L +TDA+FR+M ILSGCDY + +
Sbjct: 175 LVFGAQRLLTKMDQHGQCVEIRRKDFCLVREISLTGWTDAEFRHMAILSGCDYLGAVNNI 234
Query: 133 GLKKA 137
GLK A
Sbjct: 235 GLKTA 239
>gi|195490492|ref|XP_002093163.1| GE21174 [Drosophila yakuba]
gi|194179264|gb|EDW92875.1| GE21174 [Drosophila yakuba]
Length = 160
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +KVP+KWYRR +G +E++CG +MA IP++
Sbjct: 42 RTEYVKYAKVFPLTALFGVKVPSKWYRRTVGILEIVCGLAMALIPYH 88
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +KVP+KWYRR +G +E++CG +MA IP+
Sbjct: 56 ALFGVKVPSKWYRRTVGILEIVCGLAMALIPY 87
>gi|195169158|ref|XP_002025392.1| GL11921 [Drosophila persimilis]
gi|198465675|ref|XP_001353725.2| GA12626 [Drosophila pseudoobscura pseudoobscura]
gi|194108860|gb|EDW30903.1| GL11921 [Drosophila persimilis]
gi|198150267|gb|EAL29459.2| GA12626 [Drosophila pseudoobscura pseudoobscura]
Length = 159
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +K+P+KWYRR IG +E++CG +MA IP++
Sbjct: 41 RTEYVKYAKVFPLTALFGVKIPSKWYRRTIGILEIVCGLAMALIPYH 87
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +K+P+KWYRR IG +E++CG +MA IP+
Sbjct: 55 ALFGVKIPSKWYRRTIGILEIVCGLAMALIPY 86
>gi|21358265|ref|NP_647639.1| CG13920 [Drosophila melanogaster]
gi|195336656|ref|XP_002034951.1| GM14433 [Drosophila sechellia]
gi|195586992|ref|XP_002083251.1| GD13635 [Drosophila simulans]
gi|17861454|gb|AAL39204.1| GH07209p [Drosophila melanogaster]
gi|23092800|gb|AAF47539.2| CG13920 [Drosophila melanogaster]
gi|194128044|gb|EDW50087.1| GM14433 [Drosophila sechellia]
gi|194195260|gb|EDX08836.1| GD13635 [Drosophila simulans]
gi|220944000|gb|ACL84543.1| CG13920-PA [synthetic construct]
gi|220953874|gb|ACL89480.1| CG13920-PA [synthetic construct]
Length = 160
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +K+P+KWYRR +G +E++CG +MA IP++
Sbjct: 42 RTEYVKYAKVFPLTALFGVKIPSKWYRRTVGILEIVCGLAMALIPYH 88
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +K+P+KWYRR +G +E++CG +MA IP+
Sbjct: 56 ALFGVKIPSKWYRRTVGILEIVCGLAMALIPY 87
>gi|194864922|ref|XP_001971174.1| GG14811 [Drosophila erecta]
gi|190652957|gb|EDV50200.1| GG14811 [Drosophila erecta]
Length = 160
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +K+P+KWYRR +G +E++CG +MA IP++
Sbjct: 42 RTEYVKYAKVFPLTALFGVKIPSKWYRRTVGILEIVCGLAMALIPYH 88
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +K+P+KWYRR +G +E++CG +MA IP+
Sbjct: 56 ALFGVKIPSKWYRRTVGILEIVCGLAMALIPY 87
>gi|156039401|ref|XP_001586808.1| hypothetical protein SS1G_11837 [Sclerotinia sclerotiorum 1980]
gi|154697574|gb|EDN97312.1| hypothetical protein SS1G_11837 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 743
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +++EDSDLLVFGAK ++ KLD GNC +++ + + L ++DA+FR M I
Sbjct: 135 GIIDGILSEDSDLLVFGAKCLLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAI 194
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY + +GLK A
Sbjct: 195 LSGCDYLASMSNIGLKTA 212
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++ KLD GNC +++ + + L ++DA+FR M ILSGCDY + +GLK A
Sbjct: 155 LLTKLDQYGNCIEVNKADFCACKDVNLTGWSDAEFRRMAILSGCDYLASMSNIGLKTA-- 212
Query: 140 YVFSIMDPDFENALRKINVYGK 161
Y E +R I GK
Sbjct: 213 YRLVRKHKTIEKVVRMIQFDGK 234
>gi|255732117|ref|XP_002550982.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
gi|240131268|gb|EER30828.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
Length = 678
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG KK+I KL G+C ++RE ++P L + ++ + R +
Sbjct: 162 GLVDGILSEDSDLLIFGCKKLITKLKDDGSCYEINRENFGKVRQIPYLNQLSNDQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY GI G+GL KA
Sbjct: 222 MLSGCDYTKGIPGIGLTKA 240
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KL G+C ++RE ++P L + ++ + R + +LSGCDY GI G+GL KA
Sbjct: 182 LITKLKDDGSCYEINRENFGKVRQIPYLNQLSNDQLRLVAMLSGCDYTKGIPGIGLTKA 240
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
Y+ Y + INML I VFDG LP K+ T ++R+KR +Q+A EL
Sbjct: 55 YITYVVNKINMLRYFGITPYFVFDGAALPTKQETNKERQKR-----RQEAKEL 102
>gi|297845884|ref|XP_002890823.1| hypothetical protein ARALYDRAFT_473168 [Arabidopsis lyrata subsp.
lyrata]
gi|297336665|gb|EFH67082.1| hypothetical protein ARALYDRAFT_473168 [Arabidopsis lyrata subsp.
lyrata]
Length = 744
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I D +ITEDSDL+ FG +II+K+D G+ KLP + L+ F+ M
Sbjct: 160 ITKQVDAIITEDSDLIPFGCPRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 220 CILSGCDYLQSLPGMGLKRA 239
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K IMVFDG LP K +E++R R+ + +A E +G+S
Sbjct: 55 HIQYCMHRVNLLRHHGVKPIMVFDGGPLPMK-LEQENKRARSRKENLARALEHEANGNS 112
>gi|145531403|ref|XP_001451468.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419123|emb|CAK84071.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I Y D +ITEDSDL+ +GA+K++YKLD G +D E + + + + KF
Sbjct: 160 ITEYVDVIITEDSDLIAYGARKVLYKLDKFGYGEEIDYESIQTCTEYNFQNWHHQKFLTF 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY I G+G+K+A
Sbjct: 220 CILSGCDYLGSISGIGIKRA 239
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
++NYC+K + L + I V+MVFDG LP+K++TEE+R KR
Sbjct: 55 HINYCLKKVEQLKKYNITVVMVFDGAKLPSKKSTEEEREKR 95
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++YKLD G +D E + + + + KF CILSGCDY I G+G+K+A
Sbjct: 182 VLYKLDKFGYGEEIDYESIQTCTEYNFQNWHHQKFLTFCILSGCDYLGSISGIGIKRA 239
>gi|355686743|gb|AER98170.1| exonuclease 1 [Mustela putorius furo]
Length = 668
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 209 EDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWT 268
EDSDLL FG KK+I K+D GN +D+ +L ++ FT KFRYMCILSGCDY +
Sbjct: 1 EDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTQEKFRYMCILSGCDYLS 59
Query: 269 GIKGMGLKKAKDYVFSIMDPDF 290
++G+GL KA + +PD
Sbjct: 60 SLRGIGLAKACKVLRLANNPDI 81
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT KFRYMCILSGCDY + ++G+GL KA
Sbjct: 13 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTQEKFRYMCILSGCDYLSSLRGIGLAKACK 71
Query: 140 YVFSIMDPDFENALRKINVYGKI 162
+ +PD +RKI Y K+
Sbjct: 72 VLRLANNPDIVKVIRKIGHYLKM 94
>gi|195375166|ref|XP_002046374.1| GJ12864 [Drosophila virilis]
gi|194153532|gb|EDW68716.1| GJ12864 [Drosophila virilis]
Length = 160
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +K+P+KWYRR +G +E++CG +MA IP++
Sbjct: 41 RTEYVKYAKVFPLTALFGVKIPSKWYRRTVGILEIVCGLAMALIPYH 87
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +K+P+KWYRR +G +E++CG +MA IP+
Sbjct: 55 ALFGVKIPSKWYRRTVGILEIVCGLAMALIPY 86
>gi|452819913|gb|EME26963.1| exonuclease 1 [Galdieria sulphuraria]
Length = 491
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ +G +IIYK+ SG+ + R+ L + + L+ FT + M I++G
Sbjct: 165 DAVITEDSDLIAYGVNRIIYKMGRSGDGFLISRKNLGALEGLALSYFTQDMLQLMSIIAG 224
Query: 264 CDYWTGIKGMGLKKAKDYV 282
CD++ GI+G+G+KKA + V
Sbjct: 225 CDFFPGIRGLGIKKAHEIV 243
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+ IIYK+ SG+ + R+ L + + L+ FT + M I++GCD++ GI+G+G+KKA
Sbjct: 180 NRIIYKMGRSGDGFLISRKNLGALEGLALSYFTQDMLQLMSIIAGCDFFPGIRGLGIKKA 239
Query: 138 KDYV 141
+ V
Sbjct: 240 HEIV 243
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEI 64
Y++Y ++ I MLL + + ++VFDG LP K TE RR+ E+
Sbjct: 55 YLDYFIERIKMLLYYNVVPVVVFDGARLPVKSETEAIRRESREM 98
>gi|195135395|ref|XP_002012118.1| GI16610 [Drosophila mojavensis]
gi|193918382|gb|EDW17249.1| GI16610 [Drosophila mojavensis]
Length = 160
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +K+P+KWYRR +G +E++CG +MA IP++
Sbjct: 41 RTEYVKYAKVFPLTAMFGIKIPSKWYRRTVGILEIVCGLAMALIPYH 87
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +K+P+KWYRR +G +E++CG +MA IP+
Sbjct: 55 AMFGIKIPSKWYRRTVGILEIVCGLAMALIPY 86
>gi|378732295|gb|EHY58754.1| exonuclease 1 [Exophiala dermatitidis NIH/UT8656]
Length = 774
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +++EDSDLLVFGAK+++ KL+ G ++R ++ LA +TD+ F M I
Sbjct: 162 GIIDGILSEDSDLLVFGAKRLLTKLNQYGELVEVERANFALCKEISLAGWTDSMFMRMAI 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY I MGLK A YV
Sbjct: 222 LSGCDYLPNIGKMGLKTAHSYV 243
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KL+ G ++R ++ LA +TD+ F M ILSGCDY I M
Sbjct: 175 LVFGAKRLLTKLNQYGELVEVERANFALCKEISLAGWTDSMFMRMAILSGCDYLPNIGKM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKI 162
GLK A YV D E LR + + GK+
Sbjct: 235 GLKTAHSYVRKYK--DVEKILRMVQLEGKM 262
>gi|195012253|ref|XP_001983551.1| GH15957 [Drosophila grimshawi]
gi|193897033|gb|EDV95899.1| GH15957 [Drosophila grimshawi]
Length = 160
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
R EYVKYAKVFPLTA+ +K+P+KWYRR +G +E++CG +MA IP++
Sbjct: 41 RTEYVKYAKVFPLTALFGVKIPSKWYRRTVGIMEIVCGLAMALIPYH 87
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
A+ +K+P+KWYRR +G +E++CG +MA IP+
Sbjct: 55 ALFGVKIPSKWYRRTVGIMEIVCGLAMALIPY 86
>gi|354544656|emb|CCE41382.1| hypothetical protein CPAR2_303710 [Candida parapsilosis]
Length = 717
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG K+I KL +C ++RE ++P LA +T + R +
Sbjct: 162 GIVDGILSEDSDLLIFGCNKLITKLKDDSSCVEINREDFHKVRQIPYLASYTSEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G+ G+GLK A
Sbjct: 222 MLSGCDYTKGVPGVGLKSA 240
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KL +C ++RE ++P LA +T + R + +LSGCDY G+ G+GLK A
Sbjct: 182 LITKLKDDSSCVEINREDFHKVRQIPYLASYTSEQLRLVAMLSGCDYTKGVPGVGLKSA 240
>gi|145532383|ref|XP_001451947.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419624|emb|CAK84550.1| unnamed protein product [Paramecium tetraurelia]
Length = 570
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
+ Y D +ITEDSDL+ +GAKK++YKLD G +D + S + + KF
Sbjct: 168 LTEYVDVIITEDSDLIAYGAKKVLYKLDKFGYGEEIDYNSISSCTEYNFQNWHHQKFLTF 227
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + + G+G+K+A
Sbjct: 228 CILSGCDYLSSLSGIGIKRA 247
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
++NYC+K + +L + I V+MVFDG LP+K+ TEE+R K+
Sbjct: 63 HINYCLKKVELLKKYNITVVMVFDGAKLPSKKTTEEEREKK 103
>gi|328774002|gb|EGF84039.1| hypothetical protein BATDEDRAFT_7998 [Batrachochytrium
dendrobatidis JAM81]
Length = 319
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 192 SAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT 251
+ +T N G +ITEDSDLLVFG K+I KLD GN + +E + + +M ++
Sbjct: 153 AQLTYLNKIGDISAIITEDSDLLVFGCSKVILKLDHQGNGIEIRQEDIANIKEMRF--WS 210
Query: 252 DAKFRYMCILSGCDYWTGIKGMGLKKA 278
KFR+MCILSGCDY +G+G+KK+
Sbjct: 211 SDKFRHMCILSGCDYLESPQGIGIKKS 237
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ S +I KLD GN + +E + + +M ++ KFR+MCILSGCDY +G+
Sbjct: 175 LVFGCSKVILKLDHQGNGIEIRQEDIANIKEMRF--WSSDKFRHMCILSGCDYLESPQGI 232
Query: 133 GLKKA 137
G+KK+
Sbjct: 233 GIKKS 237
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y+ YC+ + L H I I+VFDG LP K TE DR KR EI + K E L +G
Sbjct: 55 YITYCLNKVRQLQNHNIWPIIVFDGDRLPIKMRTENDRHKRREIS-RAKGFEYLRAGQ 111
>gi|238882475|gb|EEQ46113.1| hypothetical protein CAWG_04457 [Candida albicans WO-1]
Length = 699
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG KK+I KL G C ++R+K ++P L ++ + R +
Sbjct: 162 GIVDGILSEDSDLLIFGCKKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G+ G+GLK A
Sbjct: 222 MLSGCDYTKGVPGIGLKTA 240
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KL G C ++R+K ++P L ++ + R + +LSGCDY G+ G+GLK A
Sbjct: 182 LITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLKTA 240
>gi|68478167|ref|XP_716825.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
gi|68478288|ref|XP_716765.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438448|gb|EAK97778.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438510|gb|EAK97839.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
Length = 699
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG KK+I KL G C ++R+K ++P L ++ + R +
Sbjct: 162 GIVDGILSEDSDLLIFGCKKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G+ G+GLK A
Sbjct: 222 MLSGCDYTKGVPGIGLKTA 240
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KL G C ++R+K ++P L ++ + R + +LSGCDY G+ G+GLK A
Sbjct: 182 LITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLKTA 240
>gi|407917461|gb|EKG10769.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 730
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +++EDSDLLVFGAK +I KLD G C ++R + ++ L +TD +FR M I
Sbjct: 162 GIIQGIVSEDSDLLVFGAKCLITKLDNYGECVVINRADFTACKEISLVGWTDDQFRQMAI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I MGL A
Sbjct: 222 LSGCDYLPSISKMGLMTA 239
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KLD G C ++R + ++ L +TD +FR M ILSGCDY I MGL A
Sbjct: 182 LITKLDNYGECVVINRADFTACKEISLVGWTDDQFRQMAILSGCDYLPSISKMGLMTA 239
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKRAEIRHKQKAAELLHSGSS 79
+++YCM + ML+ IK +VFDG HLP KE T ++R KR E K+ ELL G +
Sbjct: 55 HIDYCMHRVRMLIHFGIKPYLVFDGDHLPGKEVTNKERAAKRKE--SKRVGMELLKLGKT 112
Query: 80 IIYKLDL 86
L+L
Sbjct: 113 SQAHLEL 119
>gi|328354260|emb|CCA40657.1| exonuclease 1 [Komagataella pastoris CBS 7435]
Length = 567
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRY 257
+ G+ D +I+EDSDLLVFG++ +I KL+ G C + R +P LA + +FR
Sbjct: 160 MKGFVDGIISEDSDLLVFGSRSLITKLNDRGECIHVQRNNFKDCANIPGLAHLSQHQFRI 219
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+ LSGCDY GI G+G+ KA
Sbjct: 220 VASLSGCDYTKGIPGIGVIKA 240
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 71 AELLHSGS-SIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTG 128
++LL GS S+I KL+ G C + R +P LA + +FR + LSGCDY G
Sbjct: 172 SDLLVFGSRSLITKLNDRGECIHVQRNNFKDCANIPGLAHLSQHQFRIVASLSGCDYTKG 231
Query: 129 IKGMGLKKA 137
I G+G+ KA
Sbjct: 232 IPGIGVIKA 240
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIRHKQKAAEL 73
Y+ Y MK + ML +I VFDG +LP K TE R +R E R A+L
Sbjct: 55 YIQYVMKRVEMLFHFQITPYFVFDGDYLPCKAETEAKREARRKEYRKLGDQAQL 108
>gi|145324070|ref|NP_001077624.1| exonuclease 1 [Arabidopsis thaliana]
gi|166232400|sp|Q8L6Z7.2|EXO1_ARATH RecName: Full=Exonuclease 1
gi|332192991|gb|AEE31112.1| exonuclease 1 [Arabidopsis thaliana]
Length = 735
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I D +ITEDSDL+ FG +II+K+D G+ KLP + L+ F+ M
Sbjct: 160 ITKQVDAIITEDSDLIPFGCLRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 220 CILSGCDYLQSLPGMGLKRA 239
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K IMVFDG LP K +E++R R+ + +A E +G+S
Sbjct: 55 HIQYCMHRVNLLRHHGVKPIMVFDGGPLPMK-LEQENKRARSRKENLARALEHEANGNS 112
>gi|428168266|gb|EKX37213.1| hypothetical protein GUITHDRAFT_40221, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYM 258
G A VI+EDSD++ FG I+YK+D SG+CC + + L K M ++K + +M
Sbjct: 162 GMAQAVISEDSDMVPFGVDMILYKMDTSGSCCIFENKPLGEGNKKSMDVSKLSGDARIHM 221
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CIL+GCDY I G+G++KA
Sbjct: 222 CILAGCDYLQSIPGIGIQKA 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
I+YK+D SG+CC + + L K M ++K + +MCIL+GCDY I G+G++KA
Sbjct: 182 ILYKMDTSGSCCIFENKPLGEGNKKSMDVSKLSGDARIHMCILAGCDYLQSIPGIGIQKA 241
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKA--AELLHSGS 78
Y+ YCM +NML + + I+V DGR LP K +R R R Q+A ELL G
Sbjct: 55 YIEYCMHLVNMLKFYGVTPIIVLDGRSLPGKARVNSERNAR---RESQRALGMELLRRGD 111
>gi|186479030|ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana]
gi|332192992|gb|AEE31113.1| exonuclease 1 [Arabidopsis thaliana]
Length = 581
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I D +ITEDSDL+ FG +II+K+D G+ KLP + L+ F+ M
Sbjct: 6 ITKQVDAIITEDSDLIPFGCLRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEM 65
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 66 CILSGCDYLQSLPGMGLKRA 85
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 28 IIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 85
>gi|344301703|gb|EGW32008.1| hypothetical protein SPAPADRAFT_50611 [Spathaspora passalidarum
NRRL Y-27907]
Length = 638
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLLVFG K++I KL G+C ++R+ +P L+ +T + R +
Sbjct: 162 GVVDGILSEDSDLLVFGCKRLITKLKDDGSCVEINRDDFGKVRSIPYLSSYTPEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G+ G+G+K A
Sbjct: 222 MLSGCDYTKGVNGIGIKSA 240
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 69/186 (37%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-------RKRAEIRHKQ----- 68
Y+ + I+ML + VFDG LP K T +R RK+AE+ KQ
Sbjct: 55 YITSILNKIDMLKYFGVTPYFVFDGAPLPTKSETNLERSTKRKQARKQAEMYMKQGKTKL 114
Query: 69 ------KAAELLHS-GSSIIYKLD-----------------------------LS----- 87
KAA + H+ SI+ +LD LS
Sbjct: 115 AFKEFMKAASVTHAMAKSIMVELDNLGIKYVVAPYEADPQMVYLEKIGVVDGILSEDSDL 174
Query: 88 ---------------GNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKG 131
G+C ++R+ +P L+ +T + R + +LSGCDY G+ G
Sbjct: 175 LVFGCKRLITKLKDDGSCVEINRDDFGKVRSIPYLSSYTPEQLRLVAMLSGCDYTKGVNG 234
Query: 132 MGLKKA 137
+G+K A
Sbjct: 235 IGIKSA 240
>gi|448531667|ref|XP_003870300.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis Co 90-125]
gi|380354654|emb|CCG24170.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis]
Length = 717
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG K+I KL +C ++R+ ++P LA +T + R +
Sbjct: 162 GIVDGILSEDSDLLIFGCNKLITKLKDDSSCVEINRDDFNKVRQIPYLASYTSEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY GI G+GLK A
Sbjct: 222 MLSGCDYTKGIPGVGLKSA 240
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KL +C ++R+ ++P LA +T + R + +LSGCDY GI G+GLK A
Sbjct: 182 LITKLKDDSSCVEINRDDFNKVRQIPYLASYTSEQLRLVAMLSGCDYTKGIPGVGLKSA 240
>gi|353240941|emb|CCA72785.1| related to EXO1-exonuclease which interacts with Msh2p
[Piriformospora indica DSM 11827]
Length = 827
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYM 258
+G ++TEDSDLLVFG + + +KLD S + R K + LA +TD +FR+M
Sbjct: 161 SGIVQGILTEDSDLLVFGCQNVYFKLDTSTYTVAHIARAKFSQVTDINLALWTDTEFRHM 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
++SGCDY G+KG+G++ A
Sbjct: 221 AMMSGCDYLEGLKGIGVRTA 240
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 79 SIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ +KLD S + R K + LA +TD +FR+M ++SGCDY G+KG+G++ A
Sbjct: 181 NVYFKLDTSTYTVAHIARAKFSQVTDINLALWTDTEFRHMAMMSGCDYLEGLKGIGVRTA 240
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE---IRHKQKAAELLHSG 77
Y++Y M I +L + I+ +VFDG LPAKE TE +RRK E + KQ A+ HS
Sbjct: 55 YIDYAMHRIRLLRYYGIEPYLVFDGGPLPAKEGTELERRKNREESLAKAKQLASRGRHSE 114
Query: 78 SSIIYK--LDLSGNCCFM 93
+ +Y +D+S F
Sbjct: 115 ARDLYARCVDISPKHAFQ 132
>gi|12323539|gb|AAG51751.1|AC068667_30 exonuclease, putative; 92014-93872 [Arabidopsis thaliana]
Length = 317
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I D +ITEDSDL+ FG +II+K+D G+ KLP + L+ F+ M
Sbjct: 160 ITKQVDAIITEDSDLIPFGCLRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 220 CILSGCDYLQSLPGMGLKRA 239
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K IMVFDG LP K +E++R R+ + +A E +G+S
Sbjct: 55 HIQYCMHRVNLLRHHGVKPIMVFDGGPLPMK-LEQENKRARSRKENLARALEHEANGNS 112
>gi|241955293|ref|XP_002420367.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
gi|223643709|emb|CAX41445.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
Length = 715
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG KK+I KL G C ++R+K ++P L ++ + R +
Sbjct: 162 GVVDGILSEDSDLLIFGCKKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKW 317
+LSGCDY G+ G+GL+ A F+ ++Y + KV + K+P +
Sbjct: 222 MLSGCDYTKGVPGIGLRTA-----------FQLVRKYNNFTKVLIALRSMGKKIPDNF 268
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KL G C ++R+K ++P L ++ + R + +LSGCDY G+ G+GL+ A
Sbjct: 182 LITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLRTA 240
>gi|149237665|ref|XP_001524709.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451306|gb|EDK45562.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 800
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG +K+I KL C +DR + M L F++++ R
Sbjct: 162 GLVDGILSEDSDLLIFGCRKLITKLKDDSTCVEIDRHNFKNVANMSYLGNFSESQLRLAA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G++G+GLK +
Sbjct: 222 MLSGCDYTKGVQGIGLKSS 240
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KL C +DR + M L F++++ R +LSGCDY G++G+GLK +
Sbjct: 182 LITKLKDDSTCVEIDRHNFKNVANMSYLGNFSESQLRLAAMLSGCDYTKGVQGIGLKSS 240
>gi|403214255|emb|CCK68756.1| hypothetical protein KNAG_0B03150 [Kazachstania naganishii CBS
8797]
Length = 719
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFRY 257
G D +++EDSDLLVFG KK+I KL+ G C +D +KLP K PL + + A FR
Sbjct: 162 GMVDGILSEDSDLLVFGCKKLITKLNDYGECIEIDSADFKKLPR--KFPLGQLSQANFRT 219
Query: 258 MCILSGCDYWTGIKGMGL 275
+ LSGCDY GI +G+
Sbjct: 220 LVCLSGCDYTNGIAKVGI 237
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 80 IIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ G C +D +KLP K PL + + A FR + LSGCDY GI +G+
Sbjct: 182 LITKLNDYGECIEIDSADFKKLPR--KFPLGQLSQANFRTLVCLSGCDYTNGIAKVGILT 239
Query: 137 AKDYVFSIMDPDFENALRKINVYGKIG 163
A V + E L +I GK+
Sbjct: 240 AMKLVQRLN--SMEKILLQIQREGKLS 264
>gi|320580512|gb|EFW94734.1| exodeoxyribonuclease 1 [Ogataea parapolymorpha DL-1]
Length = 1767
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +I+EDSDLL+FG +++I KLD SG C + R+K + + F++ + + M I
Sbjct: 162 GIVQGIISEDSDLLIFGCQRLITKLDDSGACIEVRRDKFKDCRESAIGLFSNEQLKLMAI 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
+SGCDY GI +G+++A + V
Sbjct: 222 VSGCDYTKGIPNVGMQRAINLV 243
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I KLD SG C + R+K + + F++ + + M I+SGCDY GI +G+++A +
Sbjct: 182 LITKLDDSGACIEVRRDKFKDCRESAIGLFSNEQLKLMAIVSGCDYTKGIPNVGMQRAIN 241
Query: 140 YV 141
V
Sbjct: 242 LV 243
>gi|198430437|ref|XP_002130214.1| PREDICTED: similar to exonuclease 1 [Ciona intestinalis]
Length = 745
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G A +ITEDSDLL FG +++K+D+ G + E L L FT FR+MCI
Sbjct: 162 GIAQAIITEDSDLLCFGCNNVVFKMDVLGRGQQVKMEHLGRVKN--LVGFTPELFRHMCI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY IKG+GL KA
Sbjct: 220 LSGCDYLPSIKGVGLVKA 237
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 14 KKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
KK YV YCMKY++ML HK+K I+VFDG LP+KE E+ R KR + + +K +
Sbjct: 48 KKEKTDQYVKYCMKYLDMLQVHKVKPILVFDGCRLPSKELVEQQRHKRRK-ENLEKGKQY 106
Query: 74 LHSG 77
L G
Sbjct: 107 LREG 110
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+++++K+D+ G + E L L FT FR+MCILSGCDY IKG+GL KA
Sbjct: 180 NNVVFKMDVLGRGQQVKMEHLGRVKN--LVGFTPELFRHMCILSGCDYLPSIKGVGLVKA 237
Query: 138 KDYVFSIMDPDFENALRKINVY 159
+ D RK+N Y
Sbjct: 238 CKALKLSKSKDAYQVARKLNQY 259
>gi|50309395|ref|XP_454705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643840|emb|CAG99792.1| KLLA0E16743p [Kluyveromyces lactis]
Length = 671
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFRY 257
G +I+EDSDLLVFG ++I KL+ + C +DR E+L K PL+K T+ + R
Sbjct: 162 GLVQGIISEDSDLLVFGCTRLITKLNDNAECIEIDRRNFERLNEG-KFPLSKLTEDQLRS 220
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYV 282
+ LSGCDY +GI +GL A YV
Sbjct: 221 LVCLSGCDYTSGIPKVGLVTAMKYV 245
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 78 SSIIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 134
+ +I KL+ + C +DR E+L K PL+K T+ + R + LSGCDY +GI +GL
Sbjct: 180 TRLITKLNDNAECIEIDRRNFERLNEG-KFPLSKLTEDQLRSLVCLSGCDYTSGIPKVGL 238
Query: 135 KKAKDYVFSIMDPDFENALRKINVYGKIG 163
A YV + + E + I GK+
Sbjct: 239 VTAMKYV--VKNRTMEQMIMAIKREGKLS 265
>gi|296421974|ref|XP_002840538.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636756|emb|CAZ84729.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSG 263
+I+EDSDLL FG K +I K+D G C +DR+ + L+ +TD +FRYMCILSG
Sbjct: 167 IISEDSDLLAFGCKNLITKMDKFGGCYTIDRDDFTAIRGSGFSLSGWTDTEFRYMCILSG 226
Query: 264 CDYWTGIKGMGLKKA 278
CDY I +GL A
Sbjct: 227 CDYLPNIPRLGLLGA 241
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWT 127
++LL G ++I K+D G C +DR+ + L+ +TD +FRYMCILSGCDY
Sbjct: 172 SDLLAFGCKNLITKMDKFGGCYTIDRDDFTAIRGSGFSLSGWTDTEFRYMCILSGCDYLP 231
Query: 128 GIKGMGLKKA 137
I +GL A
Sbjct: 232 NIPRLGLLGA 241
>gi|302678463|ref|XP_003028914.1| hypothetical protein SCHCODRAFT_59252 [Schizophyllum commune H4-8]
gi|300102603|gb|EFI94011.1| hypothetical protein SCHCODRAFT_59252 [Schizophyllum commune H4-8]
Length = 277
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 193 AVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-----DREKLPSALKMPL 247
A ER A +A ++TEDSDLLVFG K I++KLD C + D + + + L
Sbjct: 117 AFLERTGAVHA--ILTEDSDLLVFGCKNILFKLD-HAQCTVVSISRSDFASVTACNGVSL 173
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+TDA+FR M ILSGCDY I G+GLK A YV
Sbjct: 174 VGWTDAQFRTMAILSGCDYLPSIPGIGLKTAGVYV 208
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 60/180 (33%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR------------AEIRHKQ 68
Y++Y M + ML + ++ +VFDG LPAK+ TE +R ++ A+ +H Q
Sbjct: 30 YIDYFMHCVRMLRHNGVEPYIVFDGGPLPAKKGTENERGQKWEESLARANMLAAQGKHSQ 89
Query: 69 -------------------------KAAELLHSGS-----------------SIIYKLDL 86
+ A L +G+ +I++KLD
Sbjct: 90 ARDQVIKALRIENVKYVVAPYEADAQLAFLERTGAVHAILTEDSDLLVFGCKNILFKLD- 148
Query: 87 SGNCCFM-----DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 141
C + D + + + L +TDA+FR M ILSGCDY I G+GLK A YV
Sbjct: 149 HAQCTVVSISRSDFASVTACNGVSLVGWTDAQFRTMAILSGCDYLPSIPGIGLKTAGVYV 208
>gi|158285567|ref|XP_308375.4| AGAP007501-PA [Anopheles gambiae str. PEST]
gi|157020054|gb|EAA04565.5| AGAP007501-PA [Anopheles gambiae str. PEST]
Length = 156
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RK YVKYAKVFPL+ +L+ K+P+KWYRR +G +EV+CG +M IP
Sbjct: 38 RKNYVKYAKVFPLSTLLEFKIPSKWYRRSVGGLEVLCGLAMVLIP 82
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 373 AILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
+L+ K+P+KWYRR +G +EV+CG +M IP
Sbjct: 52 TLLEFKIPSKWYRRSVGGLEVLCGLAMVLIP 82
>gi|291230420|ref|XP_002735164.1| PREDICTED: exonuclease-like [Saccoglossus kowalevskii]
Length = 155
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALKMPLAKFTDAKFRYMCILSGCDY 266
TE+SD++V+GA K+ K D S F+ + +KLP L +T K RY+CIL+GCDY
Sbjct: 54 TENSDVIVYGASKVFTKTDFSSGTSFLVEADKLPQCFN--LENWTFTKVRYICILAGCDY 111
Query: 267 WTGIKGMGLKKAKDYVFSIMDPD 289
I G+G+K+A ++V+ I + D
Sbjct: 112 LPSIPGIGIKRAIEFVYKIKEKD 134
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 46 RHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSIIYKLDLSGNCCFM-DREKLPSALKM 104
+H+P ++R R + + + +++ S + K D S F+ + +KLP
Sbjct: 34 KHIPQMAYLCKNRCGRL-VSFTENSDVIVYGASKVFTKTDFSSGTSFLVEADKLPQCFN- 91
Query: 105 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 148
L +T K RY+CIL+GCDY I G+G+K+A ++V+ I + D
Sbjct: 92 -LENWTFTKVRYICILAGCDYLPSIPGIGIKRAIEFVYKIKEKD 134
>gi|307106511|gb|EFN54756.1| hypothetical protein CHLNCDRAFT_24009 [Chlorella variabilis]
Length = 341
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
+ GY D V+TEDSDLL +G + +K+D +G + E LP + F F+ M
Sbjct: 160 VNGYVDVVLTEDSDLLCYGCPTVFFKMDKNGEGEEVQLEDLPQCKDLAFQGFGHDLFQEM 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
C+L+GCD+ + + G+G+KKA ++
Sbjct: 220 CVLAGCDFVSSLPGIGIKKAHQHL 243
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L + ++ +K+D +G + E LP + F F+ MC+L+GCD+ + + G+
Sbjct: 175 LCYGCPTVFFKMDKNGEGEEVQLEDLPQCKDLAFQGFGHDLFQEMCVLAGCDFVSSLPGI 234
Query: 133 GLKKAKDYV 141
G+KKA ++
Sbjct: 235 GIKKAHQHL 243
>gi|428184049|gb|EKX52905.1| EXO1 exonuclease 1 DNA repair [Guillardia theta CCMP2712]
Length = 353
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSG---NCCFMDREKLPSALK-MPLAKFTDA 253
N+ GY VI+EDSD++ FGAK ++ K+D G + C R+KL A M L+ +
Sbjct: 159 NLQGYVSAVISEDSDIIAFGAKAVLLKMDKDGYGEDTCPRYRQKLLGACSTMNLSGWEPE 218
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKA 278
+F MCI +GCDY + GMG+KKA
Sbjct: 219 RFTQMCIFAGCDYLKSLPGMGIKKA 243
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIRHK 67
YV YC+ + MLL +K+ +MVFDG +LP+K+ TE DR+ R E R K
Sbjct: 55 YVTYCLDRVKMLLHYKVIPVMVFDGANLPSKQGTEVDRKLSRLENRSK 102
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 79 SIIYKLDLSG---NCCFMDREKLPSALK-MPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 134
+++ K+D G + C R+KL A M L+ + +F MCI +GCDY + GMG+
Sbjct: 181 AVLLKMDKDGYGEDTCPRYRQKLLGACSTMNLSGWEPERFTQMCIFAGCDYLKSLPGMGI 240
Query: 135 KKAKDYVFSI------MDPDFENALRKINVYGKI 162
KKA + +I +D F A+ K+ + G +
Sbjct: 241 KKAYAAINNIGGQRAPLDECFVRAINKLRLDGTL 274
>gi|403373775|gb|EJY86812.1| Exonuclease 1, putative [Oxytricha trifallax]
Length = 1007
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 46/82 (56%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ V TEDSDLL FG KK+ +K+D G +D +KL + K FT CI
Sbjct: 162 GHVQVVFTEDSDLLAFGVKKVFFKMDSDGFGIEIDLDKLQTIKKPDFTMFTQDMLLTTCI 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY IKG+G KA+ V
Sbjct: 222 LSGCDYLDSIKGIGFMKAQKLV 243
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 22 VNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
+ YC K INML H + +MVFDG L K++TEE R+K E +K K E + G+
Sbjct: 56 IQYCTKRINMLKNHNVTPVMVFDGGKLNMKKSTEEVRQKTREKNYK-KFQEYMKKGN 111
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ +K+D G +D +KL + K FT CILSGCDY IKG+G KA+
Sbjct: 182 VFFKMDSDGFGIEIDLDKLQTIKKPDFTMFTQDMLLTTCILSGCDYLDSIKGIGFMKAQK 241
Query: 140 YV 141
V
Sbjct: 242 LV 243
>gi|302678719|ref|XP_003029042.1| hypothetical protein SCHCODRAFT_17178 [Schizophyllum commune H4-8]
gi|300102731|gb|EFI94139.1| hypothetical protein SCHCODRAFT_17178 [Schizophyllum commune H4-8]
Length = 316
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 193 AVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-----DREKLPSALKMPL 247
A ER A +A ++TEDSDLLVFG K +++KLD C + D + + + L
Sbjct: 156 AFLERTGAVHA--ILTEDSDLLVFGCKNVLFKLD-HAQCTVVSISRSDFASVTACDGVSL 212
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+TDA+FR M ILSGCDY I G+GLK A YV
Sbjct: 213 VGWTDAQFRTMAILSGCDYLPSIPGIGLKTAAVYV 247
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 79 SIIYKLDLSGNCCFM-----DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
++++KLD C + D + + + L +TDA+FR M ILSGCDY I G+G
Sbjct: 181 NVLFKLD-HAQCTVVSISRSDFASVTACDGVSLVGWTDAQFRTMAILSGCDYLPSIPGIG 239
Query: 134 LKKAKDYV 141
LK A YV
Sbjct: 240 LKTAAVYV 247
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE---IRHKQKAAELLH 75
H Y++Y M + ML + ++ +VFDG LPAK+ TE +RR++ E R AA+ H
Sbjct: 53 HKYIDYFMHRVRMLRHNGVEPYIVFDGGPLPAKKGTENERRQKREESLARANMLAAQGKH 112
Query: 76 S 76
S
Sbjct: 113 S 113
>gi|66802930|ref|XP_635308.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
discoideum AX4]
gi|74851348|sp|Q54ED2.1|EXO1_DICDI RecName: Full=Exonuclease 1
gi|60463584|gb|EAL61769.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1046
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 192 SAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK--MPLAK 249
+ +T +I G D +ITEDSDL+ FGA II+K+D G + E L S K
Sbjct: 153 AQLTYLSITGQVDAIITEDSDLVAFGATHIIFKMDKYGYAQEIKTEDLGSCKKDGYDFID 212
Query: 250 FTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
F R MCILSGCDY + GMGLK +
Sbjct: 213 FNQTMLRQMCILSGCDYLPSLSGMGLKTS 241
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKRAEIRHKQKA--AELLHSG 77
Y+NY + I ML+++K+ +++FDG LP K+ E++R R R E ++K KA E S
Sbjct: 55 YINYFISRIKMLISYKVIPVVIFDGGPLPNKKLKEQERLRHREEYKNKAKAYLLEGNKSQ 114
Query: 78 SSIIYK--LDLSGNCCFMDREKLPSALKMP--LAKF-TDAKFRYMCILSGCD 124
++I ++ +D++ F+ ++L ALK+ +A + DA+ Y+ I D
Sbjct: 115 ANICFQKAVDITPRMAFLLIKEL-RALKVEYLVAPYEADAQLTYLSITGQVD 165
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 77 GSSIIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 134
+ II+K+D G + E L S K F R MCILSGCDY + GMGL
Sbjct: 179 ATHIIFKMDKYGYAQEIKTEDLGSCKKDGYDFIDFNQTMLRQMCILSGCDYLPSLSGMGL 238
Query: 135 KKA 137
K +
Sbjct: 239 KTS 241
>gi|294657671|ref|XP_459977.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
gi|199432866|emb|CAG88226.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
Length = 678
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG +I KL+ G C + R+ + K+P L+ +T + R +
Sbjct: 162 GLVDGILSEDSDLLIFGCNTLITKLNDYGECIEICRDNFCNVKKIPFLSNYTQEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKAKDYV 282
+LSGCDY GI G+GLK A + V
Sbjct: 222 MLSGCDYTKGIPGIGLKTAFNLV 244
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+++I KL+ G C + R+ + K+P L+ +T + R + +LSGCDY GI G+GLK
Sbjct: 180 NTLITKLNDYGECIEICRDNFCNVKKIPFLSNYTQEQLRLVAMLSGCDYTKGIPGIGLKT 239
Query: 137 AKDYV 141
A + V
Sbjct: 240 AFNLV 244
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y+N MK I+ML ++ +VFDG +LP K T ++RR + E K KA EL+ +G+
Sbjct: 55 YINSVMKKIDMLRHFGVEPYLVFDGAYLPTKAETAKERRLKREEAQK-KANELIKAGN 111
>gi|299742153|ref|XP_001832288.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
gi|298405054|gb|EAU89661.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK------LPSALKMPLAKFTDAK 254
G D ++TEDSDLLVFG K + +K D S N + E+ +P + LA +TD +
Sbjct: 162 GLVDGILTEDSDLLVFGCKSVFFKFD-STNYTVVSIERKDFASVVPPRSDIHLAGWTDVQ 220
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
FR M ILSGCDY I G+GLK A
Sbjct: 221 FRSMAILSGCDYLPSIPGIGLKTA 244
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YVNY M ++ML KI+ +VFDG LPAK+ TE +R+K+ E
Sbjct: 55 YVNYAMDRVHMLRHFKIEPYIVFDGGPLPAKKGTESERKKKRE 97
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 79 SIIYKLDLSGNCCFMDREK------LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
S+ +K D S N + E+ +P + LA +TD +FR M ILSGCDY I G+
Sbjct: 181 SVFFKFD-STNYTVVSIERKDFASVVPPRSDIHLAGWTDVQFRSMAILSGCDYLPSIPGI 239
Query: 133 GLKKA 137
GLK A
Sbjct: 240 GLKTA 244
>gi|145493760|ref|XP_001432875.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399990|emb|CAK65478.1| unnamed protein product [Paramecium tetraurelia]
Length = 553
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 21/150 (14%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA-----------LKMPL 247
++G D+ ITEDSDL+ + I++KL +G C ++ +KL + ++ L
Sbjct: 160 LSGQCDFAITEDSDLICYQCPLIVFKLQSNGACFELELQKLRESRQNRAHIKSDDIRQFL 219
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTA 307
A F + + +CI+SGCDY I+GMG+KKA DY+ S D D N +K AK F
Sbjct: 220 A-FKNEQLIDVCIMSGCDYVPSIRGMGIKKAIDYM-SKYD-DISNTISKLKKAKQF---- 272
Query: 308 ILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
+ K+P + Y +I+ + +I F P
Sbjct: 273 --NGKIPEE-YEKIVKATRLIFQFQTVYCP 299
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 19/107 (17%)
Query: 80 IIYKLDLSGNCCFMDREKLPSA-----------LKMPLAKFTDAKFRYMCILSGCDYWTG 128
I++KL +G C ++ +KL + ++ LA F + + +CI+SGCDY
Sbjct: 182 IVFKLQSNGACFELELQKLRESRQNRAHIKSDDIRQFLA-FKNEQLIDVCIMSGCDYVPS 240
Query: 129 IKGMGLKKAKDYVFSIMDPDFENALRKI----NVYGKI-GSYVKITK 170
I+GMG+KKA DY+ S D D N + K+ GKI Y KI K
Sbjct: 241 IRGMGIKKAIDYM-SKYD-DISNTISKLKKAKQFNGKIPEEYEKIVK 285
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
Y+ Y K + ML ++I I++FDGR+L AKE TE+ RK+ + ++ KA EL SG++
Sbjct: 55 YLYYVQKMLIMLKEYEITPILIFDGRNLRAKEKTEQ-MRKQIKQQNLLKAKELQESGNT 112
>gi|302789395|ref|XP_002976466.1| hypothetical protein SELMODRAFT_175620 [Selaginella moellendorffii]
gi|302824817|ref|XP_002994048.1| hypothetical protein SELMODRAFT_138122 [Selaginella moellendorffii]
gi|300138102|gb|EFJ04882.1| hypothetical protein SELMODRAFT_138122 [Selaginella moellendorffii]
gi|300156096|gb|EFJ22726.1| hypothetical protein SELMODRAFT_175620 [Selaginella moellendorffii]
Length = 401
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
+ G D VITEDSDL+ +G KI++K+D +G + L + L FT M
Sbjct: 160 LRGVVDAVITEDSDLVAYGCPKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
CILSGCDY ++GMG+K+A + +
Sbjct: 220 CILSGCDYLPSLQGMGVKRAHNLI 243
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
++NYCM +N+L H IK ++VFDG LP K A +E++R RA H + A E SG+
Sbjct: 55 FLNYCMHRVNLLRHHGIKPLLVFDGGSLPMK-AEQEEKRSRAREEHLKLARECEASGN 111
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
I++K+D +G + L + L FT MCILSGCDY ++GMG+K+A
Sbjct: 182 ILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLPSLQGMGVKRA-- 239
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
N +R+ Y K+ ++K +
Sbjct: 240 ----------HNLIRRFRSYEKVIRHLKFS 259
>gi|392561830|gb|EIW55011.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 320
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC--CFMDRE----KLPSALKMPLAKFTDAK 254
G D +ITEDSDLLVFG K +++KLD + + C ++ +A + L ++DA+
Sbjct: 162 GAVDGIITEDSDLLVFGCKNVLFKLDHAASTVTCIARKDFAAIASTAAGGLSLVGWSDAQ 221
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
FR M ILSGCDY I G+GLK A
Sbjct: 222 FRTMAILSGCDYLPSIPGIGLKTA 245
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 79 SIIYKLDLSGNC--CFMDRE----KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
++++KLD + + C ++ +A + L ++DA+FR M ILSGCDY I G+
Sbjct: 181 NVLFKLDHAASTVTCIARKDFAAIASTAAGGLSLVGWSDAQFRTMAILSGCDYLPSIPGI 240
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGK 161
GLK A + EN L + + GK
Sbjct: 241 GLKTA--WTLLRKHKTVENTLSALRLEGK 267
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
YV Y M + +L H I +VFDG LPAK+ TE +R++R
Sbjct: 55 YVEYAMHRVRLLRHHGITPYLVFDGGPLPAKQGTEAERKQR 95
>gi|448082392|ref|XP_004195129.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359376551|emb|CCE87133.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG ++ KL+ G C + R+ K+P LA FT+ + R +
Sbjct: 162 GLVDGILSEDSDLLIFGCNTLVTKLNDFGECIEICRKNFDKVKKVPGLASFTEEQLRIVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G G+GLK A
Sbjct: 222 MLSGCDYTKGFPGIGLKTA 240
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
++++ KL+ G C + R+ K+P LA FT+ + R + +LSGCDY G G+GLK
Sbjct: 180 NTLVTKLNDFGECIEICRKNFDKVKKVPGLASFTEEQLRIVAMLSGCDYTKGFPGIGLKT 239
Query: 137 A 137
A
Sbjct: 240 A 240
>gi|363748330|ref|XP_003644383.1| hypothetical protein Ecym_1331 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888015|gb|AET37566.1| hypothetical protein Ecym_1331 [Eremothecium cymbalariae
DBVPG#7215]
Length = 681
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFR 256
+G VI+EDSDLLVFG +++I KL+ G C + R LPS+ PL K D++ R
Sbjct: 162 SGIVSGVISEDSDLLVFGCRRLITKLNEFGECIEISRGDFHHLPSSF--PLGKLDDSELR 219
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
M LSGCDY GI +GL A
Sbjct: 220 TMVCLSGCDYTAGIPKVGLLTA 241
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 80 IIYKLDLSGNCCFMDR---EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ G C + R LPS+ PL K D++ R M LSGCDY GI +GL
Sbjct: 183 LITKLNEFGECIEISRGDFHHLPSSF--PLGKLDDSELRTMVCLSGCDYTAGIPKVGLLT 240
Query: 137 A 137
A
Sbjct: 241 A 241
>gi|392589296|gb|EIW78627.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 318
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-----DREKLPSALKMPLAKFTDAKF 255
G D +ITEDSDLLVFG K +++KLD C + D + A + L + DA+F
Sbjct: 162 GLVDGIITEDSDLLVFGCKHVLFKLDAVA-CTLISIQRKDFGSVTDAGGVSLVGWNDAQF 220
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
R M ILSGCDY I G+GLK A
Sbjct: 221 RAMAILSGCDYLPSIPGIGLKTA 243
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YV+Y M + +L HKI+ +VFDG LPAK TE +R++R +
Sbjct: 55 YVDYAMSRVRLLKHHKIQPYIVFDGGPLPAKRGTESERKQRRD 97
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 80 IIYKLDLSGNCCFM-----DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 134
+++KLD C + D + A + L + DA+FR M ILSGCDY I G+GL
Sbjct: 182 VLFKLDAVA-CTLISIQRKDFGSVTDAGGVSLVGWNDAQFRAMAILSGCDYLPSIPGIGL 240
Query: 135 KKAKDYVFSIMDPD-------FENALRKINV-YGKIGSYVKITKEFLTSGAPQPFGAR 184
K A + D FE RK NV Y I S+ K FL P R
Sbjct: 241 KTAATLLRRHRTVDQVVRALRFE---RKKNVPYNYIESFRLAEKAFLHQRVYCPLAER 295
>gi|358054677|dbj|GAA99603.1| hypothetical protein E5Q_06304 [Mixia osmundae IAM 14324]
Length = 687
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +ITEDSDLLVFG + +I+KLD G + +L + +T +FR M I
Sbjct: 194 GVVQGIITEDSDLLVFGCQTVIFKLDNEGRGQEVKASRLNKCREYNFTSWTATEFRQMAI 253
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY I G+GLK A
Sbjct: 254 LSGCDYLDSISGLGLKTA 271
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++I+KLD G + +L + +T +FR M ILSGCDY I G+GLK A
Sbjct: 213 TVIFKLDNEGRGQEVKASRLNKCREYNFTSWTATEFRQMAILSGCDYLDSISGLGLKTA 271
>gi|403411526|emb|CCL98226.1| predicted protein [Fibroporia radiculosa]
Length = 743
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPSALK-----MPLAKFTDAK 254
G D +ITEDSDLLVFG KK+++KLD S + R S + L ++D +
Sbjct: 103 GIVDGIITEDSDLLVFGCKKVLFKLDPTSATIICVSRADFASVTSGSSGGISLLGWSDVQ 162
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
FR M ILSGCDY I+G+GLK A
Sbjct: 163 FRSMAILSGCDYLPSIQGIGLKTA 186
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 106 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGK 161
L ++D +FR M ILSGCDY I+G+GLK A + EN +R +N+ GK
Sbjct: 155 LLGWSDVQFRSMAILSGCDYLPSIQGIGLKTAHSLLRKYK--TVENVIRALNLEGK 208
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 26 MKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
M + +L ++IK +VFDG LPAK+ TE DR+KR
Sbjct: 1 MHRVRLLQHYRIKPYIVFDGGPLPAKQGTESDRKKR 36
>gi|384483460|gb|EIE75640.1| hypothetical protein RO3G_00344 [Rhizopus delemar RA 99-880]
Length = 515
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
YA ITEDSDLL FG +I+KL+ G+C + E + + + F+ R++C+
Sbjct: 162 NYAQAAITEDSDLLAFGCSTVIFKLNRYGDCMRIHFEDISKVID--IKPFSVTTLRHICM 219
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY +KG+GLK A+ +
Sbjct: 220 LSGCDYLPSLKGIGLKTAETLI 241
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G S++I+KL+ G+C + E + + + F+ R++C+LSGCDY +
Sbjct: 172 SDLLAFGCSTVIFKLNRYGDCMRIHFEDISKVID--IKPFSVTTLRHICMLSGCDYLPSL 229
Query: 130 KGMGLKKAKDYV 141
KG+GLK A+ +
Sbjct: 230 KGIGLKTAETLI 241
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKRAE 63
YV+Y M INML +K+ ++VFDG+ LP K+ T R +KR E
Sbjct: 55 YVSYFMNLINMLRFYKVIPLVVFDGQSLPMKQETNSKRAQKRKE 98
>gi|356512555|ref|XP_003524984.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 481
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+G D VITEDSDL+ FG +II+K+D G L ++ F M
Sbjct: 160 ISGQVDAVITEDSDLIPFGCPRIIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 220 CILSGCDYLQSLSGMGLKRA 239
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G L ++ F MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLSGMGLKRA 239
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L +K I+VFDG LP K + +E++R RA + +A E G+S
Sbjct: 55 HIEYCMHRVNLLRHFGVKPILVFDGGLLPMK-SEQENKRARARKDNLARAVEHESDGNS 112
>gi|449015893|dbj|BAM79295.1| exonuclease I [Cyanidioschyzon merolae strain 10D]
Length = 557
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+V+GA+ I++KLD G +++ L + L F YMC+L+G
Sbjct: 173 DLVITEDSDLIVYGARSILFKLDRYGYGDHVEQRSLGAVTNPSLLTFNPDMLLYMCVLAG 232
Query: 264 CDYWTGIKGMGLKKAKDYV 282
CD++ GI G+++A V
Sbjct: 233 CDFFAGIPRTGIRRAHALV 251
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
+++ SI++KLD G +++ L + L F YMC+L+GCD++ GI
Sbjct: 183 IVYGARSILFKLDRYGYGDHVEQRSLGAVTNPSLLTFNPDMLLYMCVLAGCDFFAGIPRT 242
Query: 133 GLKKAKDYV 141
G+++A V
Sbjct: 243 GIRRAHALV 251
>gi|157121614|ref|XP_001659910.1| hypothetical protein AaeL_AAEL009300 [Aedes aegypti]
gi|108874639|gb|EAT38864.1| AAEL009300-PA [Aedes aegypti]
Length = 121
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RK YVKYAKVFP + + D K+P+KWYRR +G +EV+CG +M IP
Sbjct: 4 RKNYVKYAKVFPFSTLFDFKLPSKWYRRSVGGLEVLCGLAMVIIP 48
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 374 ILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
+ D K+P+KWYRR +G +EV+CG +M IP
Sbjct: 19 LFDFKLPSKWYRRSVGGLEVLCGLAMVIIP 48
>gi|330796677|ref|XP_003286392.1| hypothetical protein DICPUDRAFT_150348 [Dictyostelium purpureum]
gi|325083664|gb|EGC37111.1| hypothetical protein DICPUDRAFT_150348 [Dictyostelium purpureum]
Length = 916
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFR 256
I G D +ITEDSDL+ +GA +I K+D G + E L S K FT R
Sbjct: 160 ITGQVDAIITEDSDLVAYGASNLILKMDKDGYAQEIKTEDLGSCKKDGYDFIDFTQTMLR 219
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
MCILSGCDY + GMGLK +
Sbjct: 220 QMCILSGCDYLPSLPGMGLKTS 241
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALK--MPLAKFTDAKFRYMCILSGCDYWTGIK 130
+ + S++I K+D G + E L S K FT R MCILSGCDY +
Sbjct: 175 VAYGASNLILKMDKDGYAQEIKTEDLGSCKKDGYDFIDFTQTMLRQMCILSGCDYLPSLP 234
Query: 131 GMGLKKA 137
GMGLK +
Sbjct: 235 GMGLKTS 241
>gi|344231339|gb|EGV63221.1| PIN domain-like protein [Candida tenuis ATCC 10573]
Length = 673
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
GY D +I+EDSDLL+FG + +I KL+ G C + + + L FT + R +
Sbjct: 162 GYVDGIISEDSDLLIFGCRTLITKLNDFGECIEISKSNFSKVTTISGLDSFTPQQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G+ G+GLK A
Sbjct: 222 MLSGCDYTKGVPGVGLKTA 240
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
YV+Y +K INML ++ MVFDG LP K AT ++R++R E + KA E + G+
Sbjct: 55 YVSYIIKKINMLRHFGVEPYMVFDGASLPTKAATAKERKERRE-EAQAKADEYMKKGN 111
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++I KL+ G C + + + L FT + R + +LSGCDY G+ G+GLK A
Sbjct: 181 TLITKLNDFGECIEISKSNFSKVTTISGLDSFTPQQLRLVAMLSGCDYTKGVPGVGLKTA 240
>gi|448086968|ref|XP_004196223.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359377645|emb|CCE86028.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG ++ KL+ G C + R+ K+P LA FT + R +
Sbjct: 162 GLVDGILSEDSDLLIFGCNTLVTKLNDFGECIEICRKNFDKVKKVPGLASFTKEQLRIVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G G+GLK A
Sbjct: 222 MLSGCDYTKGFPGIGLKTA 240
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
++++ KL+ G C + R+ K+P LA FT + R + +LSGCDY G G+GLK
Sbjct: 180 NTLVTKLNDFGECIEICRKNFDKVKKVPGLASFTKEQLRIVAMLSGCDYTKGFPGIGLKT 239
Query: 137 A 137
A
Sbjct: 240 A 240
>gi|345569752|gb|EGX52581.1| hypothetical protein AOL_s00007g569 [Arthrobotrys oligospora ATCC
24927]
Length = 537
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G +++EDSDLLVFGAK ++ KL G C + R P +A ++D++F M +
Sbjct: 162 GEVSAILSEDSDLLVFGAKCLLTKLGQYGECIAIHRSDFPGVSGASMAGWSDSEFCRMAV 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY I MG+K A +V
Sbjct: 222 LSGCDYLGNIPKMGIKTAYKFV 243
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++ KL G C + R P +A ++D++F M +LSGCDY I M
Sbjct: 175 LVFGAKCLLTKLGQYGECIAIHRSDFPGVSGASMAGWSDSEFCRMAVLSGCDYLGNIPKM 234
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
G+K A +V D +R I + G K+F+ +
Sbjct: 235 GIKTAYKFVRRYKSAD--KIVRAIRMDGSFAVPASYEKDFIAA 275
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+Y M + ML + + +VFDG +LP K+ TE DR KR + ++ ELL G
Sbjct: 55 YVDYAMHRVRMLQHYGVTPYLVFDGDYLPGKKGTELDREKRRK-SSRETGLELLRLG 110
>gi|255639461|gb|ACU20025.1| unknown [Glycine max]
Length = 287
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+G D VITEDSDL+ FG +II+K+D G L ++ F M
Sbjct: 160 ISGQVDAVITEDSDLIPFGCPRIIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 220 CILSGCDYLQSLSGMGLKRA 239
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G L ++ F MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGQGVQFQDSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLSGMGLKRA 239
>gi|378755169|gb|EHY65196.1| hypothetical protein NERG_01642 [Nematocida sp. 1 ERTm2]
Length = 233
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 74/249 (29%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
YV++C++ L+AH +++ VFDG P K++T + RR R + + + K L+ G+
Sbjct: 59 YVSFCIRKCQALIAHGVELFFVFDGEEHPMKKSTNQKRRDR-KAQMQSKVEHLIARGNI- 116
Query: 81 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 140
R+ P ++S C +K D
Sbjct: 117 --------------RDARP-------------------LMSRC----------MKVDADM 133
Query: 141 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIA 200
V + AL+KINV I Y PQ +GR
Sbjct: 134 V-----SNLAAALKKINVPHMIAPY---------EADPQLVYLEKKGR------------ 167
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
D + TEDSDL+V+GAKKI++KL+ + +REK+ ++ +P+ K + + +
Sbjct: 168 --IDCITTEDSDLIVYGAKKILFKLNEAHGGELYNREKILASCSLPI-KCLLTQLKEIVS 224
Query: 261 LSGCDYWTG 269
LSGCDY G
Sbjct: 225 LSGCDYTDG 233
>gi|367009066|ref|XP_003679034.1| hypothetical protein TDEL_0A04910 [Torulaspora delbrueckii]
gi|359746691|emb|CCE89823.1| hypothetical protein TDEL_0A04910 [Torulaspora delbrueckii]
Length = 593
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
+++EDSDLL+FG +K+I K++ G C C D ++LP K PL + TD + R M LS
Sbjct: 167 ILSEDSDLLIFGCRKLITKMNDFGECIEICRDDFDQLPR--KFPLNQLTDEEIRIMVCLS 224
Query: 263 GCDYWTGIKGMGL 275
GCDY +GI +GL
Sbjct: 225 GCDYTSGIPKVGL 237
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 80 IIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 134
+I K++ G C C D ++LP K PL + TD + R M LSGCDY +GI +GL
Sbjct: 182 LITKMNDFGECIEICRDDFDQLPR--KFPLNQLTDEEIRIMVCLSGCDYTSGIPKVGL 237
>gi|426195183|gb|EKV45113.1| hypothetical protein AGABI2DRAFT_207951 [Agaricus bisporus var.
bisporus H97]
Length = 320
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC-CFMDREKLPS-------ALKMPLAKFTD 252
G ++TEDSDLLVFG K +++KLD N C + R S + + L + D
Sbjct: 162 GLVSAILTEDSDLLVFGCKNVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWND 221
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKD 280
+FR M ILSGCDY I G+GLK A +
Sbjct: 222 TQFRAMAILSGCDYLPSIPGIGLKTANN 249
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 79 SIIYKLDLSGNC-CFMDREKLPS-------ALKMPLAKFTDAKFRYMCILSGCDYWTGIK 130
++++KLD N C + R S + + L + D +FR M ILSGCDY I
Sbjct: 181 NVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWNDTQFRAMAILSGCDYLPSIP 240
Query: 131 GMGLKKAKD 139
G+GLK A +
Sbjct: 241 GIGLKTANN 249
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE---IRHKQKAAELLH 75
H YV+Y M + +L + ++ +VFDG LPAK TE +R+KR + R K A+ H
Sbjct: 53 HKYVDYAMHRVRLLRHYGVEPYVVFDGGPLPAKRGTESERKKRRDENLARGKALVAQGRH 112
Query: 76 S 76
S
Sbjct: 113 S 113
>gi|255562588|ref|XP_002522300.1| exonuclease, putative [Ricinus communis]
gi|223538553|gb|EEF40158.1| exonuclease, putative [Ricinus communis]
Length = 629
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+ D VITEDSDL+ FG +I++K+D G +L ++ + FT M
Sbjct: 130 ISKQVDAVITEDSDLIPFGCPRIVFKMDKYGQGIEFQYSRLQLNKELSFSGFTHEMILQM 189
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 190 CILSGCDYLQSLPGMGLKRA 209
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
I++K+D G +L ++ + FT MCILSGCDY + GMGLK+A
Sbjct: 152 IVFKMDKYGQGIEFQYSRLQLNKELSFSGFTHEMILQMCILSGCDYLQSLPGMGLKRA 209
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++ YCM +N+L + +K I+VFDG LP K + +E++R R+ + +A E +G+S
Sbjct: 24 MHIQYCMHRVNLLRHYGVKPILVFDGGLLPMK-SEQENKRARSRKENLSRAIEHEANGNS 82
>gi|356528364|ref|XP_003532774.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 743
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+G D VITEDSDL+ FG +II+K+D G L ++ F M
Sbjct: 160 ISGQVDAVITEDSDLIPFGCPRIIFKMDKFGQGVQFQYSMLQKNKELSFEGFNRQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 220 CILSGCDYLQSLPGMGLKRA 239
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L +K I+VFDG LP K + +E++R RA + +A E G+S
Sbjct: 55 HIEYCMHRVNLLRHFGVKPILVFDGGLLPMK-SEQENKRARARKDNLARAVEHESDGNS 112
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G L ++ F MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGQGVQFQYSMLQKNKELSFEGFNRQMLLEMCILSGCDYLQSLPGMGLKRA 239
>gi|224116484|ref|XP_002317312.1| predicted protein [Populus trichocarpa]
gi|222860377|gb|EEE97924.1| predicted protein [Populus trichocarpa]
Length = 398
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L + FT+ MCI SG
Sbjct: 165 DAVITEDSDLIPFGCHRIIFKMDKYGQGVEFQNSRLQQNKDISFVGFTNEMLLEMCIFSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMGLK+A
Sbjct: 225 CDYQQSLPGMGLKRA 239
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G +L + FT+ MCI SGCDY + GMGLK+A
Sbjct: 182 IIFKMDKYGQGVEFQNSRLQQNKDISFVGFTNEMLLEMCIFSGCDYQQSLPGMGLKRA 239
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L + +K I+VFDG LP K +E++R R + +A E +G+S
Sbjct: 55 HIEYCMHRVNLLRHYGVKPILVFDGGLLPMK-IEQENKRARTRKENLVRAIEHESNGNS 112
>gi|409076372|gb|EKM76744.1| hypothetical protein AGABI1DRAFT_78182 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 320
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC-CFMDREKLPS-------ALKMPLAKFTD 252
G ++TEDSDLLVFG K +++KLD N C + R S + + L + D
Sbjct: 162 GLVSAILTEDSDLLVFGCKNVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWND 221
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKD 280
+FR M ILSGCDY I G+GLK A +
Sbjct: 222 TQFRAMAILSGCDYLPSIPGIGLKTANN 249
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 79 SIIYKLDLSGNC-CFMDREKLPS-------ALKMPLAKFTDAKFRYMCILSGCDYWTGIK 130
++++KLD N C + R S + + L + D +FR M ILSGCDY I
Sbjct: 181 NVLFKLDHVANTVCHISRTDFGSVTSTAMDSSSINLHGWNDTQFRAMAILSGCDYLPSIP 240
Query: 131 GMGLKKAKD 139
G+GLK A +
Sbjct: 241 GIGLKTANN 249
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE---IRHKQKAAELLH 75
H YV+Y M + +L + ++ +VFDG LPAK TE +R+KR + R K A+ H
Sbjct: 53 HKYVDYAMHRVRLLRHYGVEPYVVFDGGPLPAKRGTESERKKRRDENLARGKALVAQGRH 112
Query: 76 S 76
S
Sbjct: 113 S 113
>gi|150866513|ref|XP_001386143.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
gi|149387769|gb|ABN68114.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
Length = 676
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG ++I KL G + R+ +P L+KF+ + R +
Sbjct: 162 GLVDGILSEDSDLLIFGCNRLITKLKDDGTLVEICRQDFHKVKSIPYLSKFSQEQLRLIA 221
Query: 260 ILSGCDYWTGIKGMGLKKAKDYV 282
+LSGCDY GI+G+G+K A + V
Sbjct: 222 MLSGCDYTNGIQGIGIKTAFNLV 244
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
+I KL G + R+ +P L+KF+ + R + +LSGCDY GI+G+G+K A
Sbjct: 182 LITKLKDDGTLVEICRQDFHKVKSIPYLSKFSQEQLRLIAMLSGCDYTNGIQGIGIKTAF 241
Query: 139 DYV 141
+ V
Sbjct: 242 NLV 244
>gi|412993637|emb|CCO14148.1| exonuclease [Bathycoccus prasinos]
Length = 640
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GYAD VITEDSD+L GA + YK+D +G + E LP + +FT F MC
Sbjct: 167 GYADVVITEDSDMLAHGAPIVFYKMDNNGIGDEIRYEDLPRNRGLRFDQFTPDLFLQMCC 226
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY + +G+KKA
Sbjct: 227 MSGCDYLPSLPNVGMKKA 244
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L H + YK+D +G + E LP + +FT F MC +SGCDY + +
Sbjct: 180 LAHGAPIVFYKMDNNGIGDEIRYEDLPRNRGLRFDQFTPDLFLQMCCMSGCDYLPSLPNV 239
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYG 160
G+KKA A+RK YG
Sbjct: 240 GMKKA------------HQAMRKCREYG 255
>gi|326381127|ref|NP_001191950.1| transmembrane protein 35 [Acyrthosiphon pisum]
Length = 152
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
RK+YVKYAKVFPL+ ++D KVPAKWYRR +G EV+ G +A +P+
Sbjct: 38 RKDYVKYAKVFPLSKMIDFKVPAKWYRRAVGGTEVLSGVCLAFVPYR 84
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 374 ILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
++D KVPAKWYRR +G EV+ G +A +P+
Sbjct: 53 MIDFKVPAKWYRRAVGGTEVLSGVCLAFVPY 83
>gi|148270937|gb|ABQ53635.1| exonuclease [Cucumis melo]
Length = 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+ D V+TEDSDL+ FG +II+K+D G + L + L+ FT M
Sbjct: 160 ISNQVDAVLTEDSDLIPFGCPRIIFKMDKFGQGVEFRYDMLQKNKDLNLSGFTKQMILEM 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKV 302
CILSGCDY + GMGLK+A + + +E +++Y+ V
Sbjct: 220 CILSGCDYLPSLPGMGLKRAHALIKKFL--SYEKVIRHLRYSTV 261
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G + L + L+ FT MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGQGVEFRYDMLQKNKDLNLSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++YCM IN+L + +K ++VFDG LP K + +E +R R + +A E +G+S
Sbjct: 55 HIDYCMHRINLLRHYGVKPVLVFDGGLLPMK-SEQEIKRARTRKENLARATEHEMNGNS 112
>gi|239789260|dbj|BAH71266.1| ACYPI007527 [Acyrthosiphon pisum]
Length = 178
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFN 339
RK+YVKYAKVFPL+ ++D KVPAKWYRR +G EV+ G +A +P+
Sbjct: 38 RKDYVKYAKVFPLSKMIDFKVPAKWYRRAVGGTEVLSGVCLAFVPYR 84
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 374 ILDMKVPAKWYRRIIGSIEVICGFSMATIPF 404
++D KVPAKWYRR +G EV+ G +A +P+
Sbjct: 53 MIDFKVPAKWYRRAVGGTEVLSGVCLAFVPY 83
>gi|340374507|ref|XP_003385779.1| PREDICTED: exonuclease 1-like [Amphimedon queenslandica]
Length = 650
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G AD+VITEDSDLL FG ++ +K++ +G+ M+ + L FT FR++CI
Sbjct: 166 GLADFVITEDSDLLAFGVSQVFFKMNDTGHGKLMELRDIAKG-NPSLKGFTPDSFRHLCI 224
Query: 261 LSGCDYWTGIKGMG 274
L GCDY + G+G
Sbjct: 225 LCGCDYLPSVHGIG 238
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 14 KKLLQHL-YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAE 72
K+ +Q+L +N+CMK +N+L + I I+VFDG +LP K TE++R++R + KQ A
Sbjct: 51 KEKIQNLPLLNFCMKRVNLLRQYDINPILVFDGANLPMKHDTEKERKERRDSYRKQGKA- 109
Query: 73 LLHSG 77
LL G
Sbjct: 110 LLKEG 114
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G S + +K++ +G+ M+ + L FT FR++CIL GCDY +
Sbjct: 176 SDLLAFGVSQVFFKMNDTGHGKLMELRDIAKG-NPSLKGFTPDSFRHLCILCGCDYLPSV 234
Query: 130 KGMG 133
G+G
Sbjct: 235 HGIG 238
>gi|365758410|gb|EHN00253.1| Exo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 703
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C C + KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCQRLITKLNDYGECLEICRDNFNKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL TD + R M LSGCDY GI +GL
Sbjct: 206 -KFPLGLLTDEEIRTMVCLSGCDYTNGIPKVGL 237
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 80 IIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ G C C + KLP K PL TD + R M LSGCDY GI +GL
Sbjct: 182 LITKLNDYGECLEICRDNFNKLPK--KFPLGLLTDEEIRTMVCLSGCDYTNGIPKVGLIT 239
Query: 137 AKDYV--FSIMDPDFENALRKINVYGKIG 163
A V F+ M E L +I GK
Sbjct: 240 AMKLVRRFNTM----ERILLRIQREGKFA 264
>gi|294925837|ref|XP_002779016.1| Exodeoxyribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239887862|gb|EER10811.1| Exodeoxyribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 329
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
+ G D VI+EDSDLL FG +IYKLDL + E P L+ L F F +
Sbjct: 169 LNGLVDAVISEDSDLLPFGCPHVIYKLDLVAGSGPVVCEGNPDFLRT-LISFPQDSFLHY 227
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVF 283
C+L+GCDY + GMG KKA +V
Sbjct: 228 CVLAGCDYLPSVTGMGPKKAYGFVL 252
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 6/55 (10%)
Query: 20 LYVNYCMKYINMLLAHKI-KVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
L++NYC++ + +LL+ + +V++VFDG LPAK E++R+KR +Q+A EL
Sbjct: 58 LHLNYCVRRLEVLLSAGVAEVVLVFDGCPLPAKLGVEDERQKR-----RQEAREL 107
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+IYKLDL + E P L+ L F F + C+L+GCDY + GMG KKA
Sbjct: 191 VIYKLDLVAGSGPVVCEGNPDFLRT-LISFPQDSFLHYCVLAGCDYLPSVTGMGPKKAYG 249
Query: 140 YVF 142
+V
Sbjct: 250 FVL 252
>gi|300175407|emb|CBK20718.2| unnamed protein product [Blastocystis hominis]
Length = 383
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL 261
Y D VITED D LV+G +++++KLD G +D +L K+ +T F Y+C+L
Sbjct: 112 YIDLVITEDGDTLVYGCRRVLFKLD-KGTGEEIDMSRLSHCTKLNFCDWTHDMFTYLCVL 170
Query: 262 SGCDYWTGIKGMGLKKA 278
SGCDY ++G+G+ +A
Sbjct: 171 SGCDYLPSLRGIGIVRA 187
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L++ +++KLD G +D +L K+ +T F Y+C+LSGCDY ++G+
Sbjct: 124 LVYGCRRVLFKLD-KGTGEEIDMSRLSHCTKLNFCDWTHDMFTYLCVLSGCDYLPSLRGI 182
Query: 133 GLKKA 137
G+ +A
Sbjct: 183 GIVRA 187
>gi|167536660|ref|XP_001750001.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771511|gb|EDQ85176.1| predicted protein [Monosiga brevicollis MX1]
Length = 530
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP----LAKFTDAKF 255
+GY D V+TEDSDL+V+ IIYKL+ SG M+ L ++ A +T F
Sbjct: 161 SGYVDAVLTEDSDLIVYQVPCIIYKLEESGEAQLMEVNLLYRGAQLDSNINFASWTPTMF 220
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
R+MCIL+GCDY MG+K A
Sbjct: 221 RWMCILAGCDYLPSAARMGIKSA 243
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 74/191 (38%), Gaps = 74/191 (38%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR------------------KR 61
++V +CMK I +L I IMVFDG+ LP+K E RR KR
Sbjct: 54 MHVRFCMKRIALLKQCNITPIMVFDGQPLPSKR-NENQRRTAQRLEGRKRGLALLREGKR 112
Query: 62 AEIRHK-------------------QKAA-ELL--------------HSG---------- 77
AE R + +KAA E+L HSG
Sbjct: 113 AEARRQFSQSIHIDGAIAFQLIEACRKAAIEVLVAPYEADAQMAFLAHSGYVDAVLTEDS 172
Query: 78 -------SSIIYKLDLSGNCCFMDREKLPSALKMP----LAKFTDAKFRYMCILSGCDYW 126
IIYKL+ SG M+ L ++ A +T FR+MCIL+GCDY
Sbjct: 173 DLIVYQVPCIIYKLEESGEAQLMEVNLLYRGAQLDSNINFASWTPTMFRWMCILAGCDYL 232
Query: 127 TGIKGMGLKKA 137
MG+K A
Sbjct: 233 PSAARMGIKSA 243
>gi|167540345|ref|XP_001733569.1| exonuclease [Entamoeba dispar SAW760]
gi|165893427|gb|EDR21684.1| exonuclease, putative [Entamoeba dispar SAW760]
Length = 532
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALKMPLA-KFTDAKFRY 257
GY D VI EDSD++ +G +++KL++ N C + + LP K P T + +
Sbjct: 207 TGYVDVVICEDSDMIPYGCSVVLFKLNIVSNICDVYQAQDLP---KTPFGINVTLFQLQI 263
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
CILSGCDY+ GI G+GLKKA
Sbjct: 264 TCILSGCDYFQGINGIGLKKA 284
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 78 SSIIYKLDLSGNCCFM-DREKLPSALKMPLA-KFTDAKFRYMCILSGCDYWTGIKGMGLK 135
S +++KL++ N C + + LP K P T + + CILSGCDY+ GI G+GLK
Sbjct: 226 SVVLFKLNIVSNICDVYQAQDLP---KTPFGINVTLFQLQITCILSGCDYFQGINGIGLK 282
Query: 136 KA 137
KA
Sbjct: 283 KA 284
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 22 VNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
VN ++Y+ HKI I VFDG LP+K+ EE+R KR
Sbjct: 102 VNGMLEYLKFFNIHKIIPIFVFDGATLPSKKLIEEERLKR 141
>gi|326525617|dbj|BAJ88855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 906
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ L FT MCILSG
Sbjct: 165 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQITRLERNRELDLNGFTKQMLLEMCILSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 225 CDYLPSLPGMGVKRA 239
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K I+VFDG LP K + +E +R R+ + ++A E +G+S
Sbjct: 55 HIEYCMHRVNLLRHHGVKPILVFDGGFLPMK-SEQEVKRARSRKENLERAREHEAAGNS 112
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQITRLERNRELDLNGFTKQMLLEMCILSGCDYLPSLPGMGVKRA 239
>gi|393217977|gb|EJD03466.1| PIN domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 415
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPS----ALKMPLAKFTDAKF 255
G D +ITEDSDLLVFG + + KLD +S + + R S A L ++DA+F
Sbjct: 162 GLVDGIITEDSDLLVFGCRNVHVKLDTVSASVVSISRADFGSPSLAADSFSLIGWSDAQF 221
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
R+M +LSGCDY I G+GLK A
Sbjct: 222 RWMAMLSGCDYLPSIAGIGLKTA 244
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++CM + +L H I +VFDG LPAK TE++R K+ E ++ ++A EL+ G
Sbjct: 55 YVDFCMARVRLLRHHGILPYLVFDGGPLPAKLGTEKEREKKRE-QNIKRANELMSQG 110
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 100 SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVY 159
+A L ++DA+FR+M +LSGCDY I G+GLK A Y E A+R I +
Sbjct: 207 AADSFSLIGWSDAQFRWMAMLSGCDYLPSIAGIGLKTA--YQLLKKYKTVEKAVRMIRLD 264
Query: 160 GK 161
GK
Sbjct: 265 GK 266
>gi|301103478|ref|XP_002900825.1| exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262101580|gb|EEY59632.1| exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 401
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 42/78 (53%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G AD VITEDSD L FG + +++K+D + L M FT+ F MCI
Sbjct: 162 GLADGVITEDSDCLPFGCQTVLFKMDRDNIAQEIQTANLKKNKGMSFHMFTEQMFLEMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
SGCDY I G GLKKA
Sbjct: 222 FSGCDYLPSIPGFGLKKA 239
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++++K+D + L M FT+ F MCI SGCDY I G GLKKA
Sbjct: 180 QTVLFKMDRDNIAQEIQTANLKKNKGMSFHMFTEQMFLEMCIFSGCDYLPSIPGFGLKKA 239
Query: 138 KDYVFSIMDPDFENALRKINVYGKI 162
Y F +R + + GK+
Sbjct: 240 --YTAMKQHGSFAKIVRALRLEGKV 262
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
YV Y M I LL + + +VFDG LP K+ TEE+RRK +QK EL
Sbjct: 55 YVTYFMDRITALLHNGVTPYVVFDGGPLPMKKGTEEERRK-----SRQKNREL 102
>gi|449525676|ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis
sativus]
Length = 685
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+ D V+TEDSDL+ FG +II+K+D G + L + + FT M
Sbjct: 160 ISNQVDAVLTEDSDLIPFGCPRIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEM 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKV 302
CILSGCDY + GMGLK+A + + +E +++Y+ V
Sbjct: 220 CILSGCDYLPSLPGMGLKRAHALIXKFL--SYEKVIRHLRYSTV 261
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G + L + + FT MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++YCM IN+L + +K ++VFDG LP K +E +R R + +A E +G+S
Sbjct: 55 HIDYCMHRINLLRHYGVKPVLVFDGGFLPMKNE-QEIKRARTRKENLARATEHEMNGNS 112
>gi|366995107|ref|XP_003677317.1| hypothetical protein NCAS_0G00770 [Naumovozyma castellii CBS 4309]
gi|342303186|emb|CCC70964.1| hypothetical protein NCAS_0G00770 [Naumovozyma castellii CBS 4309]
Length = 709
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFR 256
G +I+EDSDLLVFG +++I KL+ G C C D KLP K PL + FR
Sbjct: 161 TGIVQGIISEDSDLLVFGCRRLITKLNDYGECIEICKDDFNKLPR--KFPLGQLNMECFR 218
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
+ LSGCDY GI +GL A V+ + + D
Sbjct: 219 TLVCLSGCDYTDGIPKVGLVTAMKMVYKLRNMD 251
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 80 IIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ G C C D KLP K PL + FR + LSGCDY GI +GL
Sbjct: 182 LITKLNDYGECIEICKDDFNKLPR--KFPLGQLNMECFRTLVCLSGCDYTDGIPKVGLVT 239
Query: 137 AKDYVFSIMDPD 148
A V+ + + D
Sbjct: 240 AMKMVYKLRNMD 251
>gi|407040925|gb|EKE40417.1| exonuclease, putative [Entamoeba nuttalli P19]
Length = 486
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALKMPLA-KFTDAKFRY 257
GY D VI EDSD++ +G +++KL++ N C + + LP K P T + +
Sbjct: 161 TGYVDVVICEDSDMIPYGCSVVLFKLNVVSNTCDVYQAQDLP---KTPFGINITLFQLQI 217
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
CILSGCDY+ G+ G+GLKKA
Sbjct: 218 TCILSGCDYFQGVNGIGLKKA 238
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 78 SSIIYKLDLSGNCCFM-DREKLPSALKMPLA-KFTDAKFRYMCILSGCDYWTGIKGMGLK 135
S +++KL++ N C + + LP K P T + + CILSGCDY+ G+ G+GLK
Sbjct: 180 SVVLFKLNVVSNTCDVYQAQDLP---KTPFGINITLFQLQITCILSGCDYFQGVNGIGLK 236
Query: 136 KA 137
KA
Sbjct: 237 KA 238
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 22 VNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
VN ++Y+ HKI I VFDG LP+K+ EE+R R
Sbjct: 56 VNGMLEYLKFFNTHKIIPIFVFDGATLPSKKGVEEERLNR 95
>gi|67480609|ref|XP_655654.1| exonuclease I [Entamoeba histolytica HM-1:IMSS]
gi|56472812|gb|EAL50271.1| exonuclease I, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702067|gb|EMD42771.1| exonuclease I, putative [Entamoeba histolytica KU27]
Length = 486
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALKMPLA-KFTDAKFRY 257
GY D VI EDSD++ +G +++KL++ N C + + LP K P T + +
Sbjct: 161 TGYVDVVICEDSDMIPYGCSVVLFKLNVVSNTCDVYQAQDLP---KTPFGINITLFQLQI 217
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
CILSGCDY+ G+ G+GLKKA
Sbjct: 218 TCILSGCDYFQGVNGIGLKKA 238
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 78 SSIIYKLDLSGNCCFM-DREKLPSALKMPLA-KFTDAKFRYMCILSGCDYWTGIKGMGLK 135
S +++KL++ N C + + LP K P T + + CILSGCDY+ G+ G+GLK
Sbjct: 180 SVVLFKLNVVSNTCDVYQAQDLP---KTPFGINITLFQLQITCILSGCDYFQGVNGIGLK 236
Query: 136 KA 137
KA
Sbjct: 237 KA 238
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 22 VNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
VN ++Y+ HKI I VFDG LP+K+ EE+R R
Sbjct: 56 VNGMLEYLKFFNTHKIIPIFVFDGATLPSKKGVEEERLNR 95
>gi|340501880|gb|EGR28613.1| hypothetical protein IMG5_171750 [Ichthyophthirius multifiliis]
Length = 576
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 85/278 (30%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
Y+ Y K I +L +KI+ I+VFDGR LPAK+ T HKQ+
Sbjct: 55 YMIYLFKIIKLLQFYKIEPIIVFDGRSLPAKDLT-----------HKQREN--------- 94
Query: 81 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 140
++ L A K+ F+Y S C L+ K
Sbjct: 95 ------------TKQKNLDIANKLIEEGKKQESFKY---FSRC----------LRVNKKM 129
Query: 141 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIA 200
++ ++D F N ++ + I Y + A F R
Sbjct: 130 IYEVIDTLFHNKIKFV-----ISPY--------EADAQIAFMVR---------------K 161
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP-----------SALKMPLAK 249
G D +TEDSDL+ +G ++I+KL L G+C ++D K +L+ LA+
Sbjct: 162 GITDAAVTEDSDLICYGCPRVIFKLKLDGSCEYLDLNKYTENQALRKTIQCESLRCFLAQ 221
Query: 250 FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+ + +CI++G DY I G+G+KKA D + + +
Sbjct: 222 SENNRI-LICIMAGSDYIPSIHGIGIKKAIDLFYRLNN 258
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 14/90 (15%)
Query: 80 IIYKLDLSGNCCFMDREKLPS-----------ALKMPLAKFTDAKFRYMCILSGCDYWTG 128
+I+KL L G+C ++D K +L+ LA+ + + +CI++G DY
Sbjct: 182 VIFKLKLDGSCEYLDLNKYTENQALRKTIQCESLRCFLAQSENNRI-LICIMAGSDYIPS 240
Query: 129 IKGMGLKKAKDYVFSIMDPDFENALRKINV 158
I G+G+KKA D + + +F++ +RK+ V
Sbjct: 241 IHGIGIKKAIDLFYRL--NNFQSVMRKLRV 268
>gi|359483569|ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
Length = 658
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
++ D +ITEDSD++ FG +II+K+D G + ++ A FT M
Sbjct: 160 VSQQVDAIITEDSDMIPFGCPRIIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLKKA
Sbjct: 220 CILSGCDYLQSLPGMGLKKA 239
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G + ++ A FT MCILSGCDY + GMGLKKA
Sbjct: 182 IIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEMCILSGCDYLQSLPGMGLKKA 239
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++YCM +N+L + ++ I+VFDG LP K +E++R R + +A E +G+S
Sbjct: 55 HIDYCMHRVNLLRHYGVEPILVFDGGLLPMK-IEQENKRARVRKENLARAIEHESNGNS 112
>gi|164449252|gb|ABY56082.1| exonuclease [Cucumis sativus]
Length = 336
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+ D V+TEDSDL+ FG +II+K+D G + L + + FT M
Sbjct: 160 ISNQVDAVLTEDSDLIPFGCPRIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEM 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKV 302
CILSGCDY + GMGLK+A + + +E +++Y+ V
Sbjct: 220 CILSGCDYLPSLPGMGLKRAHALIKKFL--SYEKVIRHLRYSTV 261
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G + L + + FT MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++YCM IN+L + +K ++VFDG LP K +E +R R + +A E +G+S
Sbjct: 55 HIDYCMHRINLLRHYGVKPVLVFDGGFLPMKN-EQEIKRARTRKENLARATEHEMNGNS 112
>gi|297740589|emb|CBI30771.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
++ D +ITEDSD++ FG +II+K+D G + ++ A FT M
Sbjct: 160 VSQQVDAIITEDSDMIPFGCPRIIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLKKA
Sbjct: 220 CILSGCDYLQSLPGMGLKKA 239
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G + ++ A FT MCILSGCDY + GMGLKKA
Sbjct: 182 IIFKMDKFGQGVEFKYSMIQQNKELSFAGFTKQMILEMCILSGCDYLQSLPGMGLKKA 239
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++YCM +N+L + ++ I+VFDG LP K +E++R R + +A E +G+S
Sbjct: 55 HIDYCMHRVNLLRHYGVEPILVFDGGLLPMK-IEQENKRARVRKENLARAIEHESNGNS 112
>gi|449459386|ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 685
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+ D V+TEDSDL+ FG +II+K+D G + L + + FT M
Sbjct: 160 ISNQVDAVLTEDSDLIPFGCPRIIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLK+A
Sbjct: 220 CILSGCDYLPSLPGMGLKRA 239
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G + L + + FT MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGQGVEFRYDMLQKNKDLNFSGFTKQMILEMCILSGCDYLPSLPGMGLKRA 239
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+++YCM IN+L + +K ++VFDG LP K +E +R R + +A E +G+S
Sbjct: 55 HIDYCMHRINLLRHYGVKPVLVFDGGFLPMKNE-QEIKRARTRKENLARATEHEMNGNS 112
>gi|357519191|ref|XP_003629884.1| Exonuclease [Medicago truncatula]
gi|355523906|gb|AET04360.1| Exonuclease [Medicago truncatula]
Length = 791
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 43/80 (53%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I+ D VITEDSDL+ FG +II+K+D G L ++ F M
Sbjct: 160 ISKQVDAVITEDSDLIPFGCPRIIFKMDKFGQGVQFQYSMLQKNKELNFEGFNKQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CILSGCDY + GMGLKKA
Sbjct: 220 CILSGCDYLQSLPGMGLKKA 239
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L + +K I+VFDG LP K +E++R R+ + ++A E +G+S
Sbjct: 55 HIEYCMHRVNLLRHYGVKPILVFDGGLLPMK-GDQENKRARSRKENLERAVEHEANGNS 112
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 28/58 (48%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G L ++ F MCILSGCDY + GMGLKKA
Sbjct: 182 IIFKMDKFGQGVQFQYSMLQKNKELNFEGFNKQMLLEMCILSGCDYLQSLPGMGLKKA 239
>gi|403361276|gb|EJY80337.1| 5'-3' exonuclease (including N-terminal domain of PolI) [Oxytricha
trifallax]
Length = 714
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRY 257
G D +ITEDSDLLV+G ++++K+D G ++D L A KMP + F Y
Sbjct: 164 TGKVDLIITEDSDLLVYGVTRVLFKMDPQGQGIYIDLNNLNQCDAFKMPQSNGGKV-FDY 222
Query: 258 -----MCILSGCDYWTGIKGMGLKKA 278
CIL+GCDY +KG+G K A
Sbjct: 223 DLLLKTCILNGCDYCESLKGVGFKTA 248
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRY-----MCILSGCDY 125
L++ + +++K+D G ++D L A KMP + F Y CIL+GCDY
Sbjct: 178 LVYGVTRVLFKMDPQGQGIYIDLNNLNQCDAFKMPQSNGGKV-FDYDLLLKTCILNGCDY 236
Query: 126 WTGIKGMGLKKA 137
+KG+G K A
Sbjct: 237 CESLKGVGFKTA 248
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 22 VNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
++YC+ I L + I IMVFDG LP K+ EE +RK+A + A +LL G
Sbjct: 59 IDYCVGKIKQLQINGITPIMVFDGARLPMKKRIEE-QRKKAREDSRNLAEDLLAKG 113
>gi|390599160|gb|EIN08557.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 317
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPS--ALKMPLAKFTDAKFRY 257
G ++TEDSDLLVFG + +++KLD +S + R S + + L ++D +FR
Sbjct: 162 GAVSAILTEDSDLLVFGCRHVLFKLDHVSATVSAVSRSDFGSLSSSDITLLGWSDVQFRA 221
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
M ILSGCDY I G+GLK A
Sbjct: 222 MAILSGCDYLPSIPGVGLKTA 242
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 80 IIYKLD-LSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+++KLD +S + R S + + L ++D +FR M ILSGCDY I G+GLK
Sbjct: 182 VLFKLDHVSATVSAVSRSDFGSLSSSDITLLGWSDVQFRAMAILSGCDYLPSIPGVGLKT 241
Query: 137 AKDYVFSIMDPDFENALRKINVYGK 161
A + + ENA+R + + GK
Sbjct: 242 A--WALLRKHKNVENAVRALRLEGK 264
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE---IRHKQKAAELLH 75
H YV+Y M + +L + I +VFDG LPAK+ TE +R KR E + KQ AA+ H
Sbjct: 53 HKYVDYAMGRVRLLRHYGITPYLVFDGGPLPAKKRTEVERAKRREENLAKGKQLAAQGRH 112
Query: 76 S 76
S
Sbjct: 113 S 113
>gi|195579938|ref|XP_002079813.1| GD21819 [Drosophila simulans]
gi|194191822|gb|EDX05398.1| GD21819 [Drosophila simulans]
Length = 119
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELL 74
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAE L
Sbjct: 54 VYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRDSRKQSKERAAEFL 107
>gi|410078279|ref|XP_003956721.1| hypothetical protein KAFR_0C05950 [Kazachstania africana CBS 2517]
gi|372463305|emb|CCF57586.1| hypothetical protein KAFR_0C05950 [Kazachstania africana CBS 2517]
Length = 719
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRY 257
G +I+EDSDLL+FG KK+I KL+ G C + R+ +LP K PL + D + R
Sbjct: 162 GLIHGIISEDSDLLIFGCKKLITKLNDYGECIEIRRDDFSRLPK--KFPLGQLNDEQIRA 219
Query: 258 MCILSGCDYWTGIKGMGL 275
+ LSGCDY GI +GL
Sbjct: 220 VVCLSGCDYTDGIPKIGL 237
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 80 IIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 134
+I KL+ G C + R+ +LP K PL + D + R + LSGCDY GI +GL
Sbjct: 182 LITKLNDYGECIEIRRDDFSRLPK--KFPLGQLNDEQIRAVVCLSGCDYTDGIPKIGL 237
>gi|357617191|gb|EHJ70639.1| hypothetical protein KGM_15040 [Danaus plexippus]
Length = 156
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 37/45 (82%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
RKEYV+YAKVFP T +LD K+P+K+YRR +G +E++ G ++A IP
Sbjct: 38 RKEYVRYAKVFPFTEMLDFKLPSKYYRRTVGGLEILFGLALAIIP 82
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 374 ILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
+LD K+P+K+YRR +G +E++ G ++A IP
Sbjct: 53 MLDFKLPSKYYRRTVGGLEILFGLALAIIP 82
>gi|242016342|ref|XP_002428788.1| exonuclease, putative [Pediculus humanus corporis]
gi|212513473|gb|EEB16050.1| exonuclease, putative [Pediculus humanus corporis]
Length = 744
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
++TEDSDLL +G +K+++K++ +G +++ + +L + F++ KFR+MCIL GCD
Sbjct: 167 IVTEDSDLLAYGCEKVMFKMEKNGRGKIVEKNNIYKSLGIKEEDFSEEKFRHMCILCGCD 226
Query: 266 YWTGIKGMGLKKAKDYVFSIMD 287
Y + +G A ++ I D
Sbjct: 227 YLPSLPSIGPANASKFIKLISD 248
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+ YCM+YI ML K+K I+VFDGR L +KE TE+ RR+ R K LL +G
Sbjct: 55 YITYCMRYIEMLQHFKVKPILVFDGRDLISKEQTEKKRREERS-RKLSKGLNLLRAG 110
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +++K++ +G +++ + +L + F++ KFR+MCIL GCDY +
Sbjct: 172 SDLLAYGCEKVMFKMEKNGRGKIVEKNNIYKSLGIKEEDFSEEKFRHMCILCGCDYLPSL 231
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVY 159
+G A ++ I D + L ++ +Y
Sbjct: 232 PSIGPANASKFIKLISDKKTVDCLPQLPIY 261
>gi|449544360|gb|EMD35333.1| hypothetical protein CERSUDRAFT_66521 [Ceriporiopsis subvermispora
B]
Length = 320
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCF-MDREKLP-----SALKMPLAKFTDAK 254
G D +ITEDSDLLVFG K +++KLD++ + + R S+ + L ++D +
Sbjct: 162 GVVDGIITEDSDLLVFGCKTVLFKLDVAASTVTRVSRADFASITSGSSSGISLVGWSDVQ 221
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
FR M ILSGCDY I G+GLK A
Sbjct: 222 FRAMAILSGCDYLPSIPGIGLKTA 245
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 106 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIM--DPDFENALRKINVYGK 161
L ++D +FR M ILSGCDY I G+GLK A +S++ EN +R +N+ GK
Sbjct: 214 LVGWSDVQFRAMAILSGCDYLPSIPGIGLKTA----WSLLRKHKTVENVVRALNLEGK 267
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE---IRHKQKAAELLHSG 77
YV+Y M + +L + I+ +VFDG LPAK+ TE +R+ R + R AA+ HS
Sbjct: 55 YVDYAMHRVRLLRHYNIEPYIVFDGGPLPAKKGTESERKARRDENIARANALAAQGKHSQ 114
Query: 78 SSIIY 82
+ Y
Sbjct: 115 AREYY 119
>gi|218189150|gb|EEC71577.1| hypothetical protein OsI_03950 [Oryza sativa Indica Group]
Length = 762
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ L FT MCILSG
Sbjct: 165 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 225 CDYLPSLPGMGVKRA 239
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 14 KKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
K L ++ YCM +NML H +K I+VFDG HLP K +E +R+R+ + ++A E
Sbjct: 48 KGLPTTRHIEYCMHRVNMLRHHGVKPILVFDGGHLPMK-GDQETKRERSRKENLERAKEH 106
Query: 74 LHSGSS 79
+G+S
Sbjct: 107 ESAGNS 112
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 239
>gi|53791673|dbj|BAD53243.1| exonuclease-like protein [Oryza sativa Japonica Group]
Length = 783
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ L FT MCILSG
Sbjct: 187 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSG 246
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 247 CDYLPSLPGMGVKRA 261
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +NML H +K I+VFDG HLP K +E +R+R+ + ++A E +G+S
Sbjct: 77 HIEYCMHRVNMLRHHGVKPILVFDGGHLPMK-GDQETKRERSRKENLERAKEHESAGNS 134
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 202 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 261
>gi|293335579|ref|NP_001167749.1| uncharacterized protein LOC100381439 [Zea mays]
gi|223943749|gb|ACN25958.1| unknown [Zea mays]
gi|414880249|tpg|DAA57380.1| TPA: hypothetical protein ZEAMMB73_036244 [Zea mays]
Length = 826
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ FT MCILSG
Sbjct: 165 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQITRLEQNRELDFNGFTRQMLLEMCILSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 225 CDYLPSLPGMGVKRA 239
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQITRLEQNRELDFNGFTRQMLLEMCILSGCDYLPSLPGMGVKRA 239
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +NML ++ I+VFDG LP K + +E +R R+ + ++A E +G+S
Sbjct: 55 HIEYCMHRVNMLRHFGVRPILVFDGGLLPIK-SYQEGKRARSRKENLERAREHEAAGNS 112
>gi|297597717|ref|NP_001044421.2| Os01g0777300 [Oryza sativa Japonica Group]
gi|75114038|sp|Q60GC1.1|EXO1_ORYSJ RecName: Full=Exonuclease 1; AltName: Full=OsEXO-1
gi|54111120|dbj|BAD60834.1| exonuclease-1 [Oryza sativa Japonica Group]
gi|255673742|dbj|BAF06335.2| Os01g0777300 [Oryza sativa Japonica Group]
Length = 836
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ L FT MCILSG
Sbjct: 165 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 225 CDYLPSLPGMGVKRA 239
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 14 KKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
K L ++ YCM +NML H +K I+VFDG HLP K +E +R+R+ + ++A E
Sbjct: 48 KGLPTTRHIEYCMHRVNMLRHHGVKPILVFDGGHLPMK-GDQETKRERSRKENLERAKEH 106
Query: 74 LHSGSS 79
+G+S
Sbjct: 107 ESAGNS 112
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 239
>gi|222619346|gb|EEE55478.1| hypothetical protein OsJ_03659 [Oryza sativa Japonica Group]
Length = 762
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ L FT MCILSG
Sbjct: 165 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 225 CDYLPSLPGMGVKRA 239
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 14 KKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
K L ++ YCM +NML H +K I+VFDG HLP K +E +R+R+ + ++A E
Sbjct: 48 KGLPTTRHIEYCMHRVNMLRHHGVKPILVFDGGHLPMK-GDQETKRERSRKENLERAKEH 106
Query: 74 LHSGSS 79
+G+S
Sbjct: 107 ESAGNS 112
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ L FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRA 239
>gi|348686536|gb|EGZ26351.1| hypothetical protein PHYSODRAFT_540882 [Phytophthora sojae]
Length = 398
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 42/78 (53%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G AD VITEDSD L FG + +++K+D + L + FT+ F MCI
Sbjct: 163 GLADGVITEDSDCLPFGCQTVLFKMDRDNVAQEIQAVNLKKNKGLSFHMFTEQMFLEMCI 222
Query: 261 LSGCDYWTGIKGMGLKKA 278
SGCDY I G GLKKA
Sbjct: 223 FSGCDYLPSISGFGLKKA 240
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++++K+D + L + FT+ F MCI SGCDY I G GLKKA
Sbjct: 181 QTVLFKMDRDNVAQEIQAVNLKKNKGLSFHMFTEQMFLEMCIFSGCDYLPSISGFGLKKA 240
Query: 138 KDYVFSIMDPDFENALRKINVYGKI 162
Y F +R + + GK+
Sbjct: 241 --YTAMKQHGSFTKIIRALRLEGKV 263
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
YV Y M I LL + + +VFDG LP K+ TEE+RRK +QK EL
Sbjct: 55 YVTYFMDRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKA-----RQKNREL 102
>gi|357131085|ref|XP_003567173.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 893
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ FT MCILSG
Sbjct: 165 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQIMRLEQNRELDFNGFTKQMLLEMCILSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 225 CDYLPSLPGMGVKRA 239
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K I+VFDG LP K + +E +R R+ + ++A E +G+S
Sbjct: 55 HIEYCMHRVNLLRHHGVKPILVFDGGFLPMK-SEQEIKRARSRKENLERAREHEAAGNS 112
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQIMRLEQNRELDFNGFTKQMLLEMCILSGCDYLPSLPGMGVKRA 239
>gi|308799503|ref|XP_003074532.1| exonuclease, putative; 92014-93872 (ISS) [Ostreococcus tauri]
gi|116000703|emb|CAL50383.1| exonuclease, putative; 92014-93872 (ISS) [Ostreococcus tauri]
Length = 1004
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ VITEDSDL+ G K + K+ G+ + E+L M FT F MC+
Sbjct: 163 GFVSAVITEDSDLIAHGCKSVFTKMSPDGSGIEIRFEELGKNRGMSFVGFTPQMFLEMCV 222
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWYRR 320
LSGCDY + G+GLKKA + + + Y KV + VP + R
Sbjct: 223 LSGCDYLPSLAGVGLKKAHSLI-----------RRFKTYNKVLRHMKFEGISVPKDYEAR 271
Query: 321 II 322
+
Sbjct: 272 FV 273
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
+ H S+ K+ G+ + E+L M FT F MC+LSGCDY + G+
Sbjct: 176 IAHGCKSVFTKMSPDGSGIEIRFEELGKNRGMSFVGFTPQMFLEMCVLSGCDYLPSLAGV 235
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVK 167
GLKKA + R+ Y K+ ++K
Sbjct: 236 GLKKAHSLI------------RRFKTYNKVLRHMK 258
>gi|242054579|ref|XP_002456435.1| hypothetical protein SORBIDRAFT_03g036255 [Sorghum bicolor]
gi|241928410|gb|EES01555.1| hypothetical protein SORBIDRAFT_03g036255 [Sorghum bicolor]
Length = 823
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VITEDSDL+ FG +II+K+D G +L ++ FT MCILSG
Sbjct: 165 DAVITEDSDLIPFGCSRIIFKMDKFGQGVEFQITRLERNRELDFNGFTRQMLLEMCILSG 224
Query: 264 CDYWTGIKGMGLKKA 278
CDY + GMG+K+A
Sbjct: 225 CDYLPSLPGMGVKRA 239
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S II+K+D G +L ++ FT MCILSGCDY + GMG+K+A
Sbjct: 180 SRIIFKMDKFGQGVEFQITRLERNRELDFNGFTRQMLLEMCILSGCDYLPSLPGMGVKRA 239
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +NML +K I+VFDG LP K + +E +R R+ + ++A E +G+S
Sbjct: 55 HIEYCMHRVNMLRHFGVKPILVFDGGLLPIK-SYQETKRARSRKENLERAREHEAAGNS 112
>gi|5262584|emb|CAB45733.1| hypothetical protein [Homo sapiens]
Length = 672
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 214 LVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 273
L FG KK+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+
Sbjct: 1 LAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGI 59
Query: 274 GLKKAKDYVFSIMDPD 289
GL KA + +PD
Sbjct: 60 GLAKACKVLRLANNPD 75
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + ++G+GL KA
Sbjct: 8 VILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSLRGIGLAKACK 66
Query: 140 YVFSIMDPDFENALRKINVYGKIGSYVKIT 169
+ +PD + V KIG Y+K+
Sbjct: 67 VLRLANNPDI------VKVIKKIGHYLKMN 90
>gi|366999787|ref|XP_003684629.1| hypothetical protein TPHA_0C00380 [Tetrapisispora phaffii CBS 4417]
gi|357522926|emb|CCE62195.1| hypothetical protein TPHA_0C00380 [Tetrapisispora phaffii CBS 4417]
Length = 784
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
+I+EDSDLLVFG +K+I KL+ G C C + ++P K P+ + TD + R M LS
Sbjct: 167 IISEDSDLLVFGCRKLITKLNDFGECIEICRDNFNQVPK--KFPIYELTDDQIRVMVCLS 224
Query: 263 GCDYWTGIKGMGLKKA 278
GCDY GI +GL +A
Sbjct: 225 GCDYTDGILKIGLIRA 240
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 80 IIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ G C C + ++P K P+ + TD + R M LSGCDY GI +GL +
Sbjct: 182 LITKLNDFGECIEICRDNFNQVPK--KFPIYELTDDQIRVMVCLSGCDYTDGILKIGLIR 239
Query: 137 A 137
A
Sbjct: 240 A 240
>gi|225719452|gb|ACO15572.1| Transmembrane protein 35 [Caligus clemensi]
Length = 165
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 293 RKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
R EY KYAKVFP +L++K+P+KWYRR +G +E+ CG M T+P
Sbjct: 38 RTEYAKYAKVFPFIKLLEVKLPSKWYRRTVGGLEITCGIIMCTLP 82
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Query: 366 PFILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIP 403
PFI +L++K+P+KWYRR +G +E+ CG M T+P
Sbjct: 49 PFI----KLLEVKLPSKWYRRTVGGLEITCGIIMCTLP 82
>gi|168048916|ref|XP_001776911.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671767|gb|EDQ58314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 327
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL 261
+ D+VITEDSDL+V+G +I +K+D G + + + L+ FT MCI+
Sbjct: 163 HVDFVITEDSDLIVYGCPQIFFKMDKHGQGVGFQISDITANKDIDLSDFTKQMILEMCIM 222
Query: 262 SGCDYWTGIKGMGLKKA 278
SGCDY + G+G+K++
Sbjct: 223 SGCDYLPSLPGIGVKRS 239
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
I +K+D G + + + L+ FT MCI+SGCDY + G+G+K++
Sbjct: 181 QIFFKMDKHGQGVGFQISDITANKDIDLSDFTKQMILEMCIMSGCDYLPSLPGIGVKRS 239
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAE 72
Y++YCM+ + ML + ++ ++VFDG LP K + +E +R R+ + ++A E
Sbjct: 55 YIDYCMRRVQMLRYYGVQPVLVFDGGSLPMK-SDQEIKRARSRKENLERALE 105
>gi|156843134|ref|XP_001644636.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156115283|gb|EDO16778.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 487
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
+I+EDSDLL+FG +++I KL+ G C C D KLP K PL + ++ + M LS
Sbjct: 167 IISEDSDLLIFGCRRLITKLNDFGECIEICKDDFNKLPK--KFPLHELSEEGIKTMVCLS 224
Query: 263 GCDYWTGIKGMGLKKA 278
GCDY GI +GL KA
Sbjct: 225 GCDYTNGIPRIGLVKA 240
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 80 IIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ G C C D KLP K PL + ++ + M LSGCDY GI +GL K
Sbjct: 182 LITKLNDFGECIEICKDDFNKLPK--KFPLHELSEEGIKTMVCLSGCDYTNGIPRIGLVK 239
Query: 137 A 137
A
Sbjct: 240 A 240
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y+ + +K + ML ++ IK VFDG LP K+ TE RR + + +++ A L +SG
Sbjct: 55 YLQFFIKKLAMLKSYGIKPYFVFDGDSLPVKKDTEVKRRNK-RVENREVAIRLYNSGE 111
>gi|159488115|ref|XP_001702066.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271440|gb|EDO97259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 294
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
+ G V+TEDSD+L +G +++YKLD +G+ + LP ++ +A F M
Sbjct: 160 LRGEVHAVLTEDSDMLAYGCPRVLYKLDRAGHGEEVLLADLPLVRELNMAGFDHDMLLQM 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
CIL+GCD+ I G+G+KKA +
Sbjct: 220 CILAGCDFLPNISGVGIKKAHGLI 243
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++YKLD +G+ + LP ++ +A F MCIL+GCD+ I G+G+KKA
Sbjct: 182 VLYKLDRAGHGEEVLLADLPLVRELNMAGFDHDMLLQMCILAGCDFLPNISGVGIKKAHG 241
Query: 140 YVFSIMDPDFENALRKINVYG 160
+ DF +R + G
Sbjct: 242 LIKK--HRDFVRVVRTLRFNG 260
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
YV Y + +++LL + + I+VFDG LP K A EED R+R ++A SG+
Sbjct: 55 YVRYFVGRVDLLLGNGVVPIVVFDGCRLPMK-ADEEDNRRRGRREALERARAHAESGN 111
>gi|290997069|ref|XP_002681104.1| predicted protein [Naegleria gruberi]
gi|284094727|gb|EFC48360.1| predicted protein [Naegleria gruberi]
Length = 382
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM---DREKLPSAL-KMPLAKFTDAKF 255
GY VITEDSDL+ +GA KI +K+D G+ + D P+A +KFT
Sbjct: 161 TGYVSCVITEDSDLIPYGAPKIFFKMDKYGHGTLLNLADINHTPTANGSTDFSKFTHDMM 220
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
MCILSGCDY + + G+G K A
Sbjct: 221 MRMCILSGCDYLSSLSGIGPKTA 243
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
Y+ YCM +NML +K+ ++VFDG LP+K TE DRR R
Sbjct: 55 YLGYCMHMVNMLKHNKVIPVLVFDGARLPSKADTESDRRSR 95
>gi|313229440|emb|CBY24027.1| unnamed protein product [Oikopleura dioica]
Length = 458
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK--FRYMCIL 261
D VITEDSDL +FG ++I KL G C +D ++ + L KF D FRY CI+
Sbjct: 166 DAVITEDSDLFIFGTNRLITKLQDDGKCQIVDLARIDKVKE--LEKFDDKLRWFRYACIM 223
Query: 262 SGCDYW-TGIKGMGLKKA 278
GCDY+ GI G GLK +
Sbjct: 224 QGCDYFPKGIPGFGLKTS 241
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 24 YCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+C+K + +L H I I VFDG LP+K+AT + RR R E ++Q+A L +G S
Sbjct: 61 FCLKRLELLKKHNITPICVFDGEKLPSKKATNDQRRARRE-ENRQRAITALKNGES 115
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 58 RRKRAEIRHKQKAAELLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK--FR 115
R KR + + + + + +I KL G C +D ++ + L KF D FR
Sbjct: 161 REKRVDAVITEDSDLFIFGTNRLITKLQDDGKCQIVDLARIDKVKE--LEKFDDKLRWFR 218
Query: 116 YMCILSGCDYW-TGIKGMGLKKAKDYVFSIMDPDFENALRKI 156
Y CI+ GCDY+ GI G GLK + + + + +++LR I
Sbjct: 219 YACIMQGCDYFPKGIPGFGLKTSVKLLLRAFEQN-DHSLRAI 259
>gi|331236892|ref|XP_003331104.1| exonuclease 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309310094|gb|EFP86685.1| exonuclease 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 101
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
+ITEDSDLLV+GA+ I++ +D SG C ++ R KL + + + +FR M +LSGCD
Sbjct: 28 IITEDSDLLVYGARNILFTMDPSGPCIYICRNKLGQVDDKRMGPWDEQQFRQMAMLSGCD 87
Query: 266 YWTGI 270
Y + I
Sbjct: 88 YLSRI 92
Score = 43.1 bits (100), Expect = 0.30, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
L++ +I++ +D SG C ++ R KL + + + +FR M +LSGCDY + I
Sbjct: 36 LVYGARNILFTMDPSGPCIYICRNKLGQVDDKRMGPWDEQQFRQMAMLSGCDYLSRI 92
>gi|406604572|emb|CCH43989.1| Exonuclease 1 [Wickerhamomyces ciferrii]
Length = 649
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D +I+EDSDLLVFGA+ ++ KL+ + + RE + ++P+ D++ +
Sbjct: 162 GLVDGIISEDSDLLVFGAQHLLTKLNDTAQFVDIRRENFKNCKEVPIGLIDDSQLIMVAC 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY +G+ G+G+ A
Sbjct: 222 LSGCDYTSGVPGVGIVTA 239
>gi|170100216|ref|XP_001881326.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644005|gb|EDR08256.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 340
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCF----------MDREKLPSALKMPLAKF 250
G + VITEDSDLLVFG + ++ KLD+ + R P+++ L +
Sbjct: 163 GIVNGVITEDSDLLVFGCQNVLLKLDVVASTVISISRKDFGTVTARRSDPNSIS--LVGW 220
Query: 251 TDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+D +FR M ILSGCDY I G+GLK A
Sbjct: 221 SDVQFRAMAILSGCDYLGSIPGVGLKTA 248
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
H YV+Y M + +L H I+ +VFDG LPAK+ TE R++R E
Sbjct: 53 HKYVDYAMHRVRLLQYHNIQPYIVFDGGPLPAKKNTESSRKRRRE 97
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 104 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+ L ++D +FR M ILSGCDY I G+GLK A
Sbjct: 215 ISLVGWSDVQFRAMAILSGCDYLGSIPGVGLKTA 248
>gi|302840229|ref|XP_002951670.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300262918|gb|EFJ47121.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 351
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G V+TEDSD+L +G +++YKLD G+ + LP ++ +A F MCI
Sbjct: 162 GDVHAVLTEDSDMLAYGCPRVLYKLDRGGSGEEVMLSDLPLVREINMAGFNHDMLLQMCI 221
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
L+GCD+ I G+G+KKA +
Sbjct: 222 LAGCDFLPNIPGVGIKKAHAMI 243
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++YKLD G+ + LP ++ +A F MCIL+GCD+ I G+G+KKA
Sbjct: 182 VLYKLDRGGSGEEVMLSDLPLVREINMAGFNHDMLLQMCILAGCDFLPNIPGVGIKKAHA 241
Query: 140 YVFSIMDPDFENALRKINVYG 160
+ DF +R ++ G
Sbjct: 242 MIRK--HRDFVKVVRNLHFNG 260
>gi|118398554|ref|XP_001031605.1| XPG I-region family protein [Tetrahymena thermophila]
gi|89285936|gb|EAR83942.1| XPG I-region family protein [Tetrahymena thermophila SB210]
Length = 648
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 8/88 (9%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMD------REKLPS-ALKMPLAKFTDAKF 255
AD+ ITEDSDL+ + KI++KL L +C ++D R L S AL+ L++ +
Sbjct: 194 ADFAITEDSDLICYSCPKIVFKLSLDSSCQYLDLLKYCERSNLQSEALRCFLSQ-NELNR 252
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVF 283
Y+CI++G DY+ I+G+G+KKA D +
Sbjct: 253 IYICIMAGSDYFPSIQGIGIKKAIDLFY 280
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 75 HSGSSIIYKLDLSGNCCFMD------REKLPS-ALKMPLAKFTDAKFRYMCILSGCDYWT 127
+S I++KL L +C ++D R L S AL+ L++ + Y+CI++G DY+
Sbjct: 207 YSCPKIVFKLSLDSSCQYLDLLKYCERSNLQSEALRCFLSQ-NELNRIYICIMAGSDYFP 265
Query: 128 GIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKI 162
I+G+G+KKA D + F+N ++K+ + KI
Sbjct: 266 SIQGIGIKKAIDLFYRC--GTFKNVMQKLRLEPKI 298
>gi|389747667|gb|EIM88845.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 322
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKL-------PSALKMPLAKFTD 252
G +ITEDSDLLVFG + + +KLD ++ + R + P + + L ++D
Sbjct: 162 GVVQGIITEDSDLLVFGCQNVHFKLDSVNATITSISRSQFSSVTATSPFSNGLSLQGWSD 221
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKA 278
+FR M ILSGCDY + G+GLK A
Sbjct: 222 VEFRAMAILSGCDYLPSVPGVGLKTA 247
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE---IRHKQKAAELLHSG 77
YV Y MK + +L + I +VFDG LPAK TE DR++R + R AA+ HS
Sbjct: 55 YVEYAMKNVRLLQHYGITPYLVFDGGPLPAKRGTETDRQQRRQENLERGNVLAAQGRHSQ 114
Query: 78 SSIIY 82
+ Y
Sbjct: 115 ARDFY 119
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 99 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINV 158
P + + L ++D +FR M ILSGCDY + G+GLK A + +E +R + +
Sbjct: 209 PFSNGLSLQGWSDVEFRAMAILSGCDYLPSVPGVGLKTA--WTLLRKHGKWEKVVRALRL 266
Query: 159 YGK 161
GK
Sbjct: 267 EGK 269
>gi|336375373|gb|EGO03709.1| hypothetical protein SERLA73DRAFT_101960 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388429|gb|EGO29573.1| hypothetical protein SERLADRAFT_445364 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPSALK----MPLAKFTDAKF 255
G D +ITEDSDLLVFG + +++KLD +S + R S + L ++D++F
Sbjct: 162 GLVDGIITEDSDLLVFGCRNVLFKLDSVSSTITSISRADFGSVTATEGGISLHGWSDSQF 221
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
R M ILSGCDY I G+GLK A
Sbjct: 222 RAMAILSGCDYLPSIPGVGLKTA 244
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
YV+Y M + +L HKI+ +VFDG LPAK+ TE +R++R
Sbjct: 55 YVDYAMHRVRLLRHHKIQPYIVFDGGPLPAKKGTEAERKQR 95
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 104 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+ L ++D++FR M ILSGCDY I G+GLK A
Sbjct: 211 ISLHGWSDSQFRAMAILSGCDYLPSIPGVGLKTA 244
>gi|298708478|emb|CBJ30602.1| exonuclease [Ectocarpus siliculosus]
Length = 722
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G+ D VITEDSD+++FG ++++KLD G +D ++ S ++ + + +
Sbjct: 160 GHVDAVITEDSDIMLFGCTRVVFKLDRDGTGQEVDLREVFSRRNDELDMRGMNEDDLMTL 219
Query: 259 CILSGCDYWTGIKGMGLKKA 278
C LSGCDY + GMGLKKA
Sbjct: 220 CALSGCDYLPSVHGMGLKKA 239
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 25/31 (80%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAK 51
++ YC++ +++LL+H +K +VFDG HLPAK
Sbjct: 55 FIKYCVERVHLLLSHGVKPYLVFDGGHLPAK 85
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWTGIK 130
+L + +++KLD G +D ++ S ++ + + +C LSGCDY +
Sbjct: 173 MLFGCTRVVFKLDRDGTGQEVDLREVFSRRNDELDMRGMNEDDLMTLCALSGCDYLPSVH 232
Query: 131 GMGLKKA 137
GMGLKKA
Sbjct: 233 GMGLKKA 239
>gi|72392705|ref|XP_847153.1| exonuclease [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359240|gb|AAX79683.1| exonuclease, putative [Trypanosoma brucei]
gi|70803183|gb|AAZ13087.1| exonuclease, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 797
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCI 260
Y D VITEDSDLLV+ ++I KLD G+C ++ E S L PL K + F CI
Sbjct: 193 YVDAVITEDSDLLVYWCPRLIAKLDHKGSCQVIEVE---SVLHCPLFKGLSYNSFLVGCI 249
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIM 286
LSGCDY ++ +G+KKA F IM
Sbjct: 250 LSGCDYLPNLRHIGVKKA----FGIM 271
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
+I KLD G+C ++ E S L PL K + F CILSGCDY ++ +G+KKA
Sbjct: 212 LIAKLDHKGSCQVIEVE---SVLHCPLFKGLSYNSFLVGCILSGCDYLPNLRHIGVKKA- 267
Query: 139 DYVFSIM 145
F IM
Sbjct: 268 ---FGIM 271
>gi|365761388|gb|EHN03046.1| Din7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 430
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + R SAL PL K ++ +FR +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDHGEALEISRNNF-SALPENFPLGKLSEQQFRNL 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +GL A
Sbjct: 221 VCLAGCDYTSGIWKVGLTTA 240
>gi|401841841|gb|EJT44166.1| DIN7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 430
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + R SAL PL K ++ +FR +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDHGEALEISRNNF-SALPENFPLGKLSEQQFRNL 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +GL A
Sbjct: 221 VCLAGCDYTSGIWKVGLTTA 240
>gi|340055345|emb|CCC49658.1| putative exonuclease, fragment, partial [Trypanosoma vivax Y486]
Length = 457
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY VITEDSDL+ + +I KLD GNC ++ + L A + F CI
Sbjct: 200 GYVQAVITEDSDLIAYHCPCLIAKLDSKGNCEVLNVQDLRRCET--FAGLSYQAFLVGCI 257
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCDY + G+G+KKA D V
Sbjct: 258 LSGCDYLPNLPGIGVKKAFDVV 279
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+I KLD GNC ++ + L A + F CILSGCDY + G+G+KKA D
Sbjct: 220 LIAKLDSKGNCEVLNVQDLRRCET--FAGLSYQAFLVGCILSGCDYLPNLPGIGVKKAFD 277
Query: 140 YV 141
V
Sbjct: 278 VV 279
>gi|224133192|ref|XP_002321506.1| predicted protein [Populus trichocarpa]
gi|222868502|gb|EEF05633.1| predicted protein [Populus trichocarpa]
Length = 457
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 171 EFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN 230
EFL + P+ A + L S ER G VITEDSDLL +G + I+K+D GN
Sbjct: 146 EFLVA----PYEADAQLAHLASLEAER---GGIAAVITEDSDLLAYGCQATIFKMDRYGN 198
Query: 231 C--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+D+ +A K F F MC+L+GCD+ + G+G+ KA YV
Sbjct: 199 GEEIVLDKVFDAAARKPSFQCFDKELFMGMCVLAGCDFLPSVPGIGISKAHSYV 252
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 7 IWWKTNLKKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKRAEIR 65
I +N +K L+ Y++Y M IN+L +KI ++VFDG ++P K TE+DR RKR
Sbjct: 46 ICLNSNSEKKLR--YLDYFMHRINLLRHYKITPVVVFDGGNIPCKAGTEQDRYRKRKA-- 101
Query: 66 HKQKAAELLHSGSS 79
+++ A E L G++
Sbjct: 102 NRELAMEKLKEGNA 115
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 71 AELLHSG-SSIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWT 127
++LL G + I+K+D GN +D+ +A K F F MC+L+GCD+
Sbjct: 179 SDLLAYGCQATIFKMDRYGNGEEIVLDKVFDAAARKPSFQCFDKELFMGMCVLAGCDFLP 238
Query: 128 GIKGMGLKKAKDYV 141
+ G+G+ KA YV
Sbjct: 239 SVPGIGISKAHSYV 252
>gi|50289437|ref|XP_447150.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526459|emb|CAG60083.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS-ALKMPLAKFTDAKFRYMC 259
G +I EDSDLLVFG ++++ KL+ G C + R+ K P+ + ++ + R M
Sbjct: 162 GLIQGIIAEDSDLLVFGCRRLVTKLNDFGECIEICRDSFGQLTSKFPIGQLSNEEIRMMV 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
LSGCDY GI +GL KA
Sbjct: 222 CLSGCDYTNGIPRIGLIKA 240
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 80 IIYKLDLSGNCCFMDREKLPS-ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
++ KL+ G C + R+ K P+ + ++ + R M LSGCDY GI +GL KA
Sbjct: 182 LVTKLNDFGECIEICRDSFGQLTSKFPIGQLSNEEIRMMVCLSGCDYTNGIPRIGLIKA 240
>gi|254580281|ref|XP_002496126.1| ZYRO0C11110p [Zygosaccharomyces rouxii]
gi|238939017|emb|CAR27193.1| ZYRO0C11110p [Zygosaccharomyces rouxii]
Length = 610
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRY 257
G+ +++EDSDLL+FG +++I KL+ G C C D KLP K L K T + R
Sbjct: 162 GFIQGILSEDSDLLIFGCRRLITKLNDFGECIEICRDDFCKLP--YKFALNKLTPQEIRT 219
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
M L+GCDY +GI +GL A
Sbjct: 220 MVCLAGCDYTSGIPKVGLVTA 240
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 80 IIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ G C C D KLP K L K T + R M L+GCDY +GI +GL
Sbjct: 182 LITKLNDFGECIEICRDDFCKLP--YKFALNKLTPQEIRTMVCLAGCDYTSGIPKVGLVT 239
Query: 137 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
A V E L + GK+ K+ EF++
Sbjct: 240 AMKLVQRFR--TLERILLHVQREGKL----KVPPEFIS 271
>gi|384248409|gb|EIE21893.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 347
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I G VI+EDSD+L +G ++ +K+D +G+ + LP L FT F M
Sbjct: 161 INGIVQVVISEDSDMLAYGCPRVFFKMDKNGDGQEICMADLPECRNPSLIGFTPDMFLEM 220
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
CIL+GCD+ + +G+KKA ++
Sbjct: 221 CILAGCDFLKALSSIGIKKAHGHI 244
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
+ +K+D +G+ + LP L FT F MCIL+GCD+ + +G+KKA
Sbjct: 183 VFFKMDKNGDGQEICMADLPECRNPSLIGFTPDMFLEMCILAGCDFLKALSSIGIKKAHG 242
Query: 140 YV 141
++
Sbjct: 243 HI 244
>gi|349581199|dbj|GAA26357.1| K7_Exo1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296364|gb|EIW07466.1| Exo1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 702
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|323352397|gb|EGA84932.1| Exo1p [Saccharomyces cerevisiae VL3]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|6324607|ref|NP_014676.1| Exo1p [Saccharomyces cerevisiae S288c]
gi|1706421|sp|P39875.2|EXO1_YEAST RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I; AltName: Full=Protein DHS1
gi|1041655|emb|CAA60749.1| ORF OR26.23 [Saccharomyces cerevisiae]
gi|1420150|emb|CAA99223.1| DHS1 [Saccharomyces cerevisiae]
gi|1840127|gb|AAB47428.1| Exo1p [Saccharomyces cerevisiae]
gi|285814922|tpg|DAA10815.1| TPA: Exo1p [Saccharomyces cerevisiae S288c]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|323346487|gb|EGA80774.1| Exo1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|365763272|gb|EHN04802.1| Exo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|323307136|gb|EGA60419.1| Exo1p [Saccharomyces cerevisiae FostersO]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|151945661|gb|EDN63902.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|190407372|gb|EDV10639.1| exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|207341254|gb|EDZ69360.1| YOR033Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273419|gb|EEU08355.1| Exo1p [Saccharomyces cerevisiae JAY291]
gi|259149515|emb|CAY86319.1| Exo1p [Saccharomyces cerevisiae EC1118]
gi|323331736|gb|EGA73150.1| Exo1p [Saccharomyces cerevisiae AWRI796]
Length = 702
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|323303082|gb|EGA56885.1| Exo1p [Saccharomyces cerevisiae FostersB]
Length = 607
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGL 275
K PL T+ + M LSGCDY GI +GL
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGL 237
>gi|261330365|emb|CBH13349.1| exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 796
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCI 260
Y D VITEDSDLLV+ ++I KLD G+C ++ E S L PL + + F CI
Sbjct: 193 YVDAVITEDSDLLVYWCPRLIAKLDHKGSCQVIEVE---SVLHCPLFQGLSYNSFLVGCI 249
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIM 286
LSGCDY ++ +G+KKA F IM
Sbjct: 250 LSGCDYLPNLRHIGVKKA----FGIM 271
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAK-FTDAKFRYMCILSGCDYWTGIKGMGLKKAK 138
+I KLD G+C ++ E S L PL + + F CILSGCDY ++ +G+KKA
Sbjct: 212 LIAKLDHKGSCQVIEVE---SVLHCPLFQGLSYNSFLVGCILSGCDYLPNLRHIGVKKA- 267
Query: 139 DYVFSIM 145
F IM
Sbjct: 268 ---FGIM 271
>gi|255714619|ref|XP_002553591.1| KLTH0E02398p [Lachancea thermotolerans]
gi|238934973|emb|CAR23154.1| KLTH0E02398p [Lachancea thermotolerans CBS 6340]
Length = 665
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSG---NCCFMDREKLPSALKMPLAKFTDAKFRY 257
G +I+EDSDLL+FG +K+I KL G C D +LPS K PL++ + R
Sbjct: 163 GLVHGIISEDSDLLIFGCRKLITKLTDHGEGIEICRDDFPRLPS--KFPLSQLCPEETRA 220
Query: 258 MCILSGCDYWTGIKGMGL 275
M LSGCDY GI +GL
Sbjct: 221 MVCLSGCDYTAGIPKIGL 238
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 91 CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV--FSIMDPD 148
C D +LPS K PL++ + R M LSGCDY GI +GL A V MD
Sbjct: 197 CRDDFPRLPS--KFPLSQLCPEETRAMVCLSGCDYTAGIPKIGLLTAMKLVRKHKTMD-- 252
Query: 149 FENALRKINVYGKIGSYVKITKEFL 173
N ++ I GK + KEFL
Sbjct: 253 --NIIKNIQREGKF----VVPKEFL 271
>gi|409048552|gb|EKM58030.1| hypothetical protein PHACADRAFT_90326 [Phanerochaete carnosa
HHB-10118-sp]
Length = 320
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPSALK-----MPLAKFTDAK 254
G D ++TEDSDLLVFG K ++ KLD + + R+ S + L ++D +
Sbjct: 162 GLVDGILTEDSDLLVFGCKSVLLKLDTVESTVISISRQDFASLTASSGGGISLLGWSDVQ 221
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
FR M ILSGCDY I +GLK A
Sbjct: 222 FRAMAILSGCDYLPSIPSVGLKTA 245
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YVNY M + +L + I +VFDG L AK+ TE DR+K+ E
Sbjct: 55 YVNYAMHRVRLLKHYNIIPYIVFDGGPLSAKKGTESDRKKKRE 97
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 79 SIIYKLD-LSGNCCFMDREKLPSALK-----MPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
S++ KLD + + R+ S + L ++D +FR M ILSGCDY I +
Sbjct: 181 SVLLKLDTVESTVISISRQDFASLTASSGGGISLLGWSDVQFRAMAILSGCDYLPSIPSV 240
Query: 133 GLKKAKDYVFSIMDPD--FENALRKINVYGK 161
GLK A +S++ EN +R + + GK
Sbjct: 241 GLKTA----WSLLRKHGCVENVIRALRIEGK 267
>gi|390599651|gb|EIN09047.1| hypothetical protein PUNSTDRAFT_134221 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 637
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPS--ALKMPLAKFTDAKFRY 257
G ++TEDSDLLVFG + ++ KLD +S + R S + + L ++D + R
Sbjct: 34 GAVSAILTEDSDLLVFGCRHVLSKLDHVSATVSAVSRPDFGSLSSSDITLLGWSDVQLRA 93
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
M ILSGCDY I G+GLK A
Sbjct: 94 MAILSGCDYLPSIPGVGLKTA 114
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 100 SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVY 159
S+ + L ++D + R M ILSGCDY I G+GLK A + + ENA+R + +
Sbjct: 77 SSSDITLLGWSDVQLRAMAILSGCDYLPSIPGVGLKTA--WSLLRKHKNVENAVRALRLE 134
Query: 160 GK 161
GK
Sbjct: 135 GK 136
>gi|395327368|gb|EJF59768.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 326
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPSALKMPLAKFT-------D 252
G D ++TEDSDLLVFG K +++KLD + + R + D
Sbjct: 162 GLVDGIMTEDSDLLVFGCKNVLFKLDPAAATVTHISRADFAAVASADGGGSGLSLLGWSD 221
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKA 278
A+FR M ILSGCDY I G+GLK A
Sbjct: 222 AQFRTMAILSGCDYLPSIPGIGLKTA 247
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 20/27 (74%)
Query: 111 DAKFRYMCILSGCDYWTGIKGMGLKKA 137
DA+FR M ILSGCDY I G+GLK A
Sbjct: 221 DAQFRTMAILSGCDYLPSIPGIGLKTA 247
>gi|326433198|gb|EGD78768.1| exonuclease 1 [Salpingoeca sp. ATCC 50818]
Length = 686
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA----KFTDAKFRY 257
Y VITEDSDLLV+G ++++K+D G + ++L ++ +T +FR
Sbjct: 163 YVHAVITEDSDLLVYGCPRVLFKMDEYGTGQEIRMQRLFQGAQISTTINFMSWTQRQFRK 222
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKW 317
MCIL+GCDY G+G+K A F+ K + K+ + A ++VPA +
Sbjct: 223 MCILAGCDYLPSPTGLGVKTA-----------FKIAKIHDNIDKIVQVIASRGIRVPADY 271
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
L++ YCMK + ML + + ++V DGR+LP+K EE +R+ + H ++ +LL +G
Sbjct: 54 LHIQYCMKRLAMLQHYGVTPVVVLDGRNLPSK-GEEEKQRRESRRNHLKQGTDLLRAG 110
>gi|365987630|ref|XP_003670646.1| hypothetical protein NDAI_0F00840 [Naumovozyma dairenensis CBS 421]
gi|343769417|emb|CCD25403.1| hypothetical protein NDAI_0F00840 [Naumovozyma dairenensis CBS 421]
Length = 723
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
+I+EDSDLL+FG +++I KL+ G C C D +LP K PL + R + LS
Sbjct: 167 IISEDSDLLIFGCRRLITKLNDYGECIEICRDDFTRLPR--KFPLGQLDSEGLRTLVCLS 224
Query: 263 GCDYWTGIKGMGLKKA 278
GCDY GI +GL A
Sbjct: 225 GCDYTDGIARIGLVTA 240
>gi|308461453|ref|XP_003093019.1| CRE-EXO-1 protein [Caenorhabditis remanei]
gi|308251938|gb|EFO95890.1| CRE-EXO-1 protein [Caenorhabditis remanei]
Length = 637
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 25/114 (21%)
Query: 204 DYVITEDSDLLVFGAKKIIYK-LDLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCI 260
D VITEDSDL+VFG + I +K +G C ++ L L KF +KFR +CI
Sbjct: 166 DAVITEDSDLIVFGCEMIYFKWQSATGECSVYEKCNLKKCFTGELGGDKFDFSKFRRICI 225
Query: 261 LSGCDY-WTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKV 313
LSGCDY +G+ G+GL A AK F LT+I D++
Sbjct: 226 LSGCDYLQSGLPGVGLSTA---------------------AKFFSLTSIKDLRT 258
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+NY KY+ LLA V+MVFDGR LPAK+ T +DRR++ E R K++A LL G
Sbjct: 55 YINYVDKYVKELLAMGCHVVMVFDGRPLPAKKGTNDDRREQREKR-KEQAEMLLAKG 110
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 108 KFTDAKFRYMCILSGCDY-WTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYV 166
KF +KFR +CILSGCDY +G+ G+GL A + D LRK+ Y K
Sbjct: 214 KFDFSKFRRICILSGCDYLQSGLPGVGLSTAAKFFSLTSIKDLRTVLRKVPSYLKNPKLK 273
Query: 167 K-ITKEFLTSGA 177
+ +T+EF+ S A
Sbjct: 274 EHVTEEFIRSFA 285
>gi|145341014|ref|XP_001415611.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575834|gb|ABO93903.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 330
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ VITEDSDL+ G + + K+ G+ + E+L + FT F MC+
Sbjct: 163 GFVAGVITEDSDLIAHGCRSVFTKMAGDGSGIEIRFEELGRNRGLSFVGFTPDMFLEMCV 222
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWYRR 320
LSGCDY + G+G+KKA + + + Y KV + VP + R
Sbjct: 223 LSGCDYLPSLNGVGVKKAHSLI-----------RRFKTYNKVLRHMKFEGIAVPKDYESR 271
Query: 321 IIGSI 325
+ ++
Sbjct: 272 FVDAL 276
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
+ H S+ K+ G+ + E+L + FT F MC+LSGCDY + G+
Sbjct: 176 IAHGCRSVFTKMAGDGSGIEIRFEELGRNRGLSFVGFTPDMFLEMCVLSGCDYLPSLNGV 235
Query: 133 GLKKAKDYV 141
G+KKA +
Sbjct: 236 GVKKAHSLI 244
>gi|268575672|ref|XP_002642815.1| Hypothetical protein CBG21211 [Caenorhabditis briggsae]
Length = 646
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 25/114 (21%)
Query: 204 DYVITEDSDLLVFGAKKIIYK-LDLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCI 260
D V+TEDSDL+VFG + I +K ++G+C + L L KF KFR +CI
Sbjct: 166 DAVVTEDSDLIVFGCETIYFKWQSVTGDCSVYQKSDLKKCFSGELGGEKFDFVKFRRICI 225
Query: 261 LSGCDY-WTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKV 313
L+GCDY +G+ G+GL A K F LT+I D+++
Sbjct: 226 LAGCDYLQSGLPGVGLATA---------------------VKFFSLTSIKDLRI 258
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+NY KYI LL + V+MVFDGR LPAK++T +DRR+ E R K+ A LL G
Sbjct: 55 YINYVDKYIQELLGMECHVVMVFDGRPLPAKKSTNDDRREMREKR-KEHAEMLLAKG 110
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 86 LSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDY-WTGIKGMGLKKAKDYVF 142
++G+C + L L KF KFR +CIL+GCDY +G+ G+GL A +
Sbjct: 190 VTGDCSVYQKSDLKKCFSGELGGEKFDFVKFRRICILAGCDYLQSGLPGVGLATAVKFFS 249
Query: 143 SIMDPDFENALRKINVY 159
D LRKI Y
Sbjct: 250 LTSIKDLRILLRKIPSY 266
>gi|444315221|ref|XP_004178268.1| hypothetical protein TBLA_0A09650 [Tetrapisispora blattae CBS 6284]
gi|387511307|emb|CCH58749.1| hypothetical protein TBLA_0A09650 [Tetrapisispora blattae CBS 6284]
Length = 751
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRY 257
G +I+EDSDLL+FG +++I KL+ C C +D KL +K PL K T +
Sbjct: 162 GIVQGIISEDSDLLIFGCQRLITKLNDYAECIEICSLDFGKL--TVKFPLGKLTPLEMIA 219
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
M LSGCDY GI +GL A
Sbjct: 220 MVCLSGCDYTDGIPKIGLVNA 240
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 80 IIYKLDLSGNC---CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 136
+I KL+ C C +D KL +K PL K T + M LSGCDY GI +GL
Sbjct: 182 LITKLNDYAECIEICSLDFGKL--TVKFPLGKLTPLEMIAMVCLSGCDYTDGIPKIGLVN 239
Query: 137 A 137
A
Sbjct: 240 A 240
>gi|397588883|gb|EJK54438.1| hypothetical protein THAOC_25932, partial [Thalassiosira oceanica]
Length = 880
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDL---SGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
G D VITEDSD+LV+G +++YK D G + R+ L + FT F +
Sbjct: 367 GAVDLVITEDSDMLVYGCPRVLYKADFKTGQGQEIQLMRD-LGENVSPSFRNFTHDMFVF 425
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYV 282
M ILSGCDY G+ G+G+K A V
Sbjct: 426 MAILSGCDYCKGVPGIGIKLAHKLV 450
>gi|365989346|ref|XP_003671503.1| hypothetical protein NDAI_0H00860 [Naumovozyma dairenensis CBS 421]
gi|343770276|emb|CCD26260.1| hypothetical protein NDAI_0H00860 [Naumovozyma dairenensis CBS 421]
Length = 416
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL--PSALKMPLAKFTDAKFRYM 258
G D +I+EDSD+L+FG ++I KL+ SG+C + K P+ + T + R +
Sbjct: 162 GMIDGIISEDSDILIFGGNRLITKLNDSGDCLQISSADFIKVQTEKFPIGELTADQIRML 221
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV--FSIMD 287
LSGCDY GI +GL A V FS M+
Sbjct: 222 VCLSGCDYTNGIWKIGLITAMKLVKQFSDMN 252
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKL--PSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 130
L+ G+ +I KL+ SG+C + K P+ + T + R + LSGCDY GI
Sbjct: 175 LIFGGNRLITKLNDSGDCLQISSADFIKVQTEKFPIGELTADQIRMLVCLSGCDYTNGIW 234
Query: 131 GMGLKKAKDYV--FSIMD 146
+GL A V FS M+
Sbjct: 235 KIGLITAMKLVKQFSDMN 252
>gi|260815018|ref|XP_002602210.1| hypothetical protein BRAFLDRAFT_76899 [Branchiostoma floridae]
gi|229287517|gb|EEN58222.1| hypothetical protein BRAFLDRAFT_76899 [Branchiostoma floridae]
Length = 513
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 26/147 (17%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRH-LPAKEATEEDR-RKRAEIRHKQKAAELLHSGS 78
YVN+ M I LL + + ++VFDGR LPAK A E+R RKR + ++A +
Sbjct: 34 YVNFFMTSIECLLRNGVTPLVVFDGRRTLPAKAAEAEERKRKRILAKATAESASDPQTAR 93
Query: 79 S------------------IIYKLD---LSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 117
S ++YK D +SG + + L + + + F KFR +
Sbjct: 94 SAYTQAVEITPAMVDRVIEVVYKWDRTTMSGQ--LIKQTSLQRSFR-DIKDFNFDKFRCI 150
Query: 118 CILSGCDYWTGIKGMGLKKAKDYVFSI 144
CIL+GCDY I G+G++ A +V ++
Sbjct: 151 CILAGCDYLKSIPGIGIRMAARFVKAV 177
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 250 FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAIL 309
F KFR +CIL+GCDY I G+G++ A +V ++ ++ ++ IL
Sbjct: 142 FNFDKFRCICILAGCDYLKSIPGIGIRMAARFVKAV------GHRDIIQSISPLSEEPIL 195
Query: 310 DMK 312
D+K
Sbjct: 196 DLK 198
>gi|328877038|gb|EGG25401.1| 5'3'-exonuclease N- and I-domain-containing protein [Dictyostelium
fasciculatum]
Length = 994
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFR 256
+ D ++TEDSDL+ +G +++K++ G C + E + S + + F R
Sbjct: 160 VTNQVDAILTEDSDLIAYGTPTVLFKMNKEGYCEEIKSENICSCKSNGLDFGNFNLTMLR 219
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
MCIL+GCDY + GMG+K +
Sbjct: 220 QMCILAGCDYLPSLHGMGIKTS 241
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y+ YC+ I+M+ +HK+ ++VFDG LP K TE+DRR + + ++K+KA L G+
Sbjct: 55 YLQYCLNLISMMKSHKVIPVIVFDGGPLPNKRGTEDDRRSKRQ-QYKEKANAYLLEGN 111
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 71 AELLHSGS-SIIYKLDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWT 127
++L+ G+ ++++K++ G C + E + S + + F R MCIL+GCDY
Sbjct: 172 SDLIAYGTPTVLFKMNKEGYCEEIKSENICSCKSNGLDFGNFNLTMLRQMCILAGCDYLP 231
Query: 128 GIKGMGLKKA 137
+ GMG+K +
Sbjct: 232 SLHGMGIKTS 241
>gi|260803225|ref|XP_002596491.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
gi|229281748|gb|EEN52503.1| hypothetical protein BRAFLDRAFT_130306 [Branchiostoma floridae]
Length = 698
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+YV + +KY+NMLL+H IK ++VFDG +LP+K+ E+ RR+R ++ + QK + L G++
Sbjct: 54 MYVKFVLKYVNMLLSHGIKPVIVFDGCNLPSKQGVEDSRRERKQL-YLQKGKQFLRDGNT 112
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFR 256
N G A VITEDSDLL FG ++I+KLDL+GN +++ +L LK+ FT KFR
Sbjct: 159 NKCGIAQAVITEDSDLLAFGCDRVIFKLDLNGNGTMIEKHRLSQCLKIKAQNFTFDKFR 217
>gi|17553464|ref|NP_499770.1| Protein EXO-1 [Caenorhabditis elegans]
gi|15718185|emb|CAB07612.2| Protein EXO-1 [Caenorhabditis elegans]
Length = 639
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 25/114 (21%)
Query: 204 DYVITEDSDLLVFGAKKIIYK-LDLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCI 260
D VITEDSDL+VFG + I +K +G C ++ L + L KF KFR +CI
Sbjct: 166 DAVITEDSDLIVFGCEMIYFKWQSATGECSVYEKCNLKNCFTGELGGDKFDFVKFRRICI 225
Query: 261 LSGCDY-WTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKV 313
LSGCDY G+ G+GL A AK F +T+I D++
Sbjct: 226 LSGCDYLQAGLPGVGLSTA---------------------AKFFSMTSIKDLRT 258
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEAT 54
YVNY KY+ LL V+MVFDGR LPAK+ T
Sbjct: 55 YVNYVNKYVKELLGMGCHVVMVFDGRPLPAKKGT 88
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 87 SGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDY-WTGIKGMGLKKAKDYVFS 143
+G C ++ L + L KF KFR +CILSGCDY G+ G+GL A +
Sbjct: 191 TGECSVYEKCNLKNCFTGELGGDKFDFVKFRRICILSGCDYLQAGLPGVGLSTAAKFFSM 250
Query: 144 IMDPDFENALRKINVYGK 161
D LRK+ Y K
Sbjct: 251 TSIKDLRTLLRKVPSYLK 268
>gi|301113736|ref|XP_002998638.1| exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262111939|gb|EEY69991.1| exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 2745
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 72/268 (26%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
Y+NY +++I +L H I I+VFDG LP+ KA E + G S
Sbjct: 2078 YLNYAIQHIKLLQTHNITPILVFDGAPLPS------------------KAQENANRGRS- 2118
Query: 81 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 140
R+ A K+ K D R + S C + D
Sbjct: 2119 -------------RRDWQLKAEKLLQEKKEDQDPR--AVFSAC-------ARAVSVTNDM 2156
Query: 141 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIA 200
V ++ LR++N+ + Y E + L+ ++ + I
Sbjct: 2157 VMRLV-----AVLRRMNITFYVAPY--------------------EADAQLAFLSRQKIV 2191
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
D VI++DSD + +G K +++KL G + R L + ++ LA +T+ +C+
Sbjct: 2192 ---DVVISQDSDCVPYGVKTVLFKLSPDGWGSELKRRSLGANEELSLAGWTE---EMLCV 2245
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDP 288
L+GCDY + G+G+ A V + P
Sbjct: 2246 LAGCDYCASVSGVGIITAYKLVNTYKTP 2273
>gi|403340704|gb|EJY69645.1| XPG family protein [Oxytricha trifallax]
Length = 666
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCC------FMDREKLPSALKMPLAKFTDAK 254
G AD I+EDSDL+ FG +++ KLD G C F+ K+ A L K +
Sbjct: 131 GIADIAISEDSDLIAFGCPRLLMKLDFRGICQVFDADDFIQNNKITDASLKFLQKANRKQ 190
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CI+ GCDY I+ +GLK A
Sbjct: 191 FVSICIMGGCDYLPSIQKVGLKIA 214
>gi|355686740|gb|AER98169.1| exonuclease 1 [Mustela putorius furo]
Length = 113
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 12 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 67
>gi|440292196|gb|ELP85438.1| exodeoxyribonuclease, putative [Entamoeba invadens IP1]
Length = 516
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D V+ EDSDL+V G K++ + +LS + + + L + + K Y+C+
Sbjct: 162 GYVDAVLCEDSDLIVHGCKRVWFGFNLSEET--VKEFTIENFAHTELGQLSREKLVYLCV 219
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+GCDY ++G+G+KKA V S +D
Sbjct: 220 FAGCDYCKSLRGVGIKKALKLVTSAVD 246
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 106 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 146
L + + K Y+C+ +GCDY ++G+G+KKA V S +D
Sbjct: 206 LGQLSREKLVYLCVFAGCDYCKSLRGVGIKKALKLVTSAVD 246
>gi|429963370|gb|ELA42914.1| hypothetical protein VICG_00229 [Vittaforma corneae ATCC 50505]
Length = 358
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA-LKMPLAKFTDAKFRYMCI 260
Y DY++TEDSDL+V+GA +I+YK D + E+ SA L + K+ +CI
Sbjct: 163 YIDYILTEDSDLVVYGATRILYKYD------GVHVEEYDSARLHLCKDKYFQENILDICI 216
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
LSGCDY I+G+G+ A + + + D D
Sbjct: 217 LSGCDYLDSIRGIGIVTAYEKLKELGDVD 245
>gi|224014124|ref|XP_002296725.1| exonuclease 1 [Thalassiosira pseudonana CCMP1335]
gi|220968580|gb|EED86926.1| exonuclease 1 [Thalassiosira pseudonana CCMP1335]
Length = 334
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL----KMPLAKFTDAKFR 256
G D VITEDSD+LV+G + +K+D + C +L L + +T F
Sbjct: 173 GVVDLVITEDSDILVYGCPRACFKIDF--DTCQGQEIQLMKNLGENESLSFKNWTHDMFV 230
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+MCI+SGCDY G+ G+G+K A V
Sbjct: 231 FMCIISGCDYCKGLPGIGIKLAHKIV 256
>gi|440291991|gb|ELP85233.1| exodeoxyribonuclease, putative [Entamoeba invadens IP1]
Length = 476
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 19/100 (19%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM- 258
GY D V+ EDSDL+ +G+ I++K+++ L A +PL+ F ++
Sbjct: 161 TGYVDLVVCEDSDLIPYGSTAILFKMNVGEGVA-----DLYKAADLPLSPFGSNVSLFLV 215
Query: 259 ---CILSGCDYWTGIKGMGLKKA----------KDYVFSI 285
C+++GCDY+ GI+G+G+KK KD VF I
Sbjct: 216 QIVCVVAGCDYFEGIEGIGMKKGLEMLKKCKTEKDAVFEI 255
>gi|342182627|emb|CCC92106.1| putative exonuclease [Trypanosoma congolense IL3000]
Length = 783
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY VI+EDSDL+ + +I KLD GNC + + +P K + + F CI
Sbjct: 193 GYVQAVISEDSDLIAYQCPYLIAKLDHQGNCQVISAQDIPRCPK--FQRLSYESFLVGCI 250
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY ++ +G+KKA
Sbjct: 251 MSGCDYLPSLRLIGIKKA 268
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+I KLD GNC + + +P K + + F CI+SGCDY ++ +G+KKA
Sbjct: 213 LIAKLDHQGNCQVISAQDIPRCPK--FQRLSYESFLVGCIMSGCDYLPSLRLIGIKKA 268
>gi|209878504|ref|XP_002140693.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556299|gb|EEA06344.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 496
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKL-DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
GY D VITEDSD+LVFG+ IYK D +G C + LP + + FT F
Sbjct: 165 TGYVDAVITEDSDMLVFGSPCTIYKHDDKTGICRVIYWGDLPRSGILRQNIFTYEMFVLG 224
Query: 259 CILSGCDYWTGIKGMGLKKA 278
C L+GCDY +G+G+K A
Sbjct: 225 CTLTGCDYVKSPQGVGIKTA 244
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIR 65
+++ YC+ +N+L + I + +FDG LP K TEE+R KR E +
Sbjct: 54 MHIQYCIDRVNLLKSKGIIPVCIFDGAPLPMKRVTEEERHMKRLEAK 100
>gi|325182167|emb|CCA16620.1| exonuclease 1 putative [Albugo laibachii Nc14]
Length = 701
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G + VITEDSD LVF K+++K+D +G + + + + + FT F MCI
Sbjct: 181 GLVNGVITEDSDCLVFDCNKVVFKMDWNGKGQEIKVQSILRNSEPNMQGFTHDMFMEMCI 240
Query: 261 LSGCDYWTGIKGMGLKKA 278
SGCDY I +GLK +
Sbjct: 241 FSGCDYLANIPRLGLKTS 258
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y++Y M ++ L+ H + +VFDG LP+K TEE RR A + KA + L +
Sbjct: 55 YIDYFMARVDNLVRHGVSPYIVFDGGSLPSKAHTEEARR-LARQNDRAKAMQFLSQNN 111
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ + +++K+D +G + + + + + FT F MCI SGCDY I +
Sbjct: 194 LVFDCNKVVFKMDWNGKGQEIKVQSILRNSEPNMQGFTHDMFMEMCIFSGCDYLANIPRL 253
Query: 133 GLKKA 137
GLK +
Sbjct: 254 GLKTS 258
>gi|323334127|gb|EGA75511.1| Din7p [Saccharomyces cerevisiae AWRI796]
gi|323355597|gb|EGA87417.1| Din7p [Saccharomyces cerevisiae VL3]
Length = 383
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +FR +
Sbjct: 115 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNL 173
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +G+ A
Sbjct: 174 VCLAGCDYTSGIWKVGVVTA 193
>gi|323305497|gb|EGA59240.1| Din7p [Saccharomyces cerevisiae FostersB]
Length = 430
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +FR +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNL 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +G+ A
Sbjct: 221 VCLAGCDYTSGIWKVGVVTA 240
>gi|207346529|gb|EDZ73002.1| YDR263Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 430
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +FR +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNL 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +G+ A
Sbjct: 221 VCLAGCDYTSGIWKVGVVTA 240
>gi|398366335|ref|NP_010549.3| Din7p [Saccharomyces cerevisiae S288c]
gi|2501673|sp|Q12086.1|DIN7_YEAST RecName: Full=DNA damage-inducible protein DIN7
gi|1134889|emb|CAA92581.1| unknown [Saccharomyces cerevisiae]
gi|1143552|emb|CAA62233.1| DIN7 protein [Saccharomyces cerevisiae]
gi|1226039|emb|CAA94102.1| Din7p [Saccharomyces cerevisiae]
gi|151942240|gb|EDN60596.1| DNA damage-inducible protein [Saccharomyces cerevisiae YJM789]
gi|190404789|gb|EDV08056.1| DNA damage-inducible protein DIN7 [Saccharomyces cerevisiae
RM11-1a]
gi|259145501|emb|CAY78765.1| Din7p [Saccharomyces cerevisiae EC1118]
gi|285811283|tpg|DAA12107.1| TPA: Din7p [Saccharomyces cerevisiae S288c]
gi|365766343|gb|EHN07841.1| Din7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300379|gb|EIW11470.1| Din7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 430
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +FR +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNL 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +G+ A
Sbjct: 221 VCLAGCDYTSGIWKVGVVTA 240
>gi|387593580|gb|EIJ88604.1| hypothetical protein NEQG_01294 [Nematocida parisii ERTm3]
gi|387597235|gb|EIJ94855.1| hypothetical protein NEPG_00380 [Nematocida parisii ERTm1]
Length = 322
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKL-DLSGNCCFMDREKLPSALKMPLAKFTDAK 254
ERN G+ D + TEDSDL+V+GA K+++KL +L G F DRE++ S +P K +
Sbjct: 163 ERN--GHIDCITTEDSDLIVYGANKVLFKLNELQGGEMF-DRERILSRCSIP-TKCLLTQ 218
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
+ + L GCDY GI +GL A
Sbjct: 219 LKEIVSLCGCDYTNGISKVGLITA 242
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIRHK 67
YV+ C+K LLAH I++ VFDG P K+ T + RR ++AE++ K
Sbjct: 59 YVSVCVKKCKALLAHGIELFFVFDGEEHPMKKNTNQKRRAQKAEVQKK 106
>gi|349577319|dbj|GAA22488.1| K7_Din7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 430
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +FR +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNL 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +G+ A
Sbjct: 221 VCLAGCDYTSGIWKVGVVTA 240
>gi|323309724|gb|EGA62931.1| Din7p [Saccharomyces cerevisiae FostersO]
Length = 408
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +FR +
Sbjct: 140 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNL 198
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +G+ A
Sbjct: 199 VCLAGCDYTSGIWKVGVVTA 218
>gi|255577346|ref|XP_002529553.1| exonuclease, putative [Ricinus communis]
gi|223530965|gb|EEF32822.1| exonuclease, putative [Ricinus communis]
Length = 576
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
VITEDSDLL +G + ++K+D GN +D+ A K F F MC+L+G
Sbjct: 174 VITEDSDLLAYGCQATVFKMDRFGNGEEIVLDKVYNAVACKPSFQHFDRELFTGMCVLAG 233
Query: 264 CDYWTGIKGMGLKKAKDYV 282
CD+ + G+G+ KA +V
Sbjct: 234 CDFLPSVPGIGIVKAHSFV 252
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 7 IWWKTNLKKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRH 66
I +N K L+ Y++Y M IN+L +KI ++VFDG +P K TE +R +R E +
Sbjct: 46 ICLDSNSDKKLR--YLDYFMHRINLLRHYKITPVVVFDGASIPCKATTEHERHRRRE-SN 102
Query: 67 KQKAAELLHSGS 78
++ A E L G+
Sbjct: 103 RKLAMEKLEQGN 114
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 71 AELLHSG-SSIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWT 127
++LL G + ++K+D GN +D+ A K F F MC+L+GCD+
Sbjct: 179 SDLLAYGCQATVFKMDRFGNGEEIVLDKVYNAVACKPSFQHFDRELFTGMCVLAGCDFLP 238
Query: 128 GIKGMGLKKAKDYV 141
+ G+G+ KA +V
Sbjct: 239 SVPGIGIVKAHSFV 252
>gi|341889727|gb|EGT45662.1| hypothetical protein CAEBREN_02863 [Caenorhabditis brenneri]
Length = 663
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 25/114 (21%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCI 260
D VITEDSDL+VFG + I +K +G C ++ L L KF KFR +CI
Sbjct: 166 DSVITEDSDLIVFGCEMIYFKWQAATGECSVYEKCNLKKCFTGELGGDKFDFVKFRRICI 225
Query: 261 LSGCDY-WTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKV 313
L+GCDY +G+ G+G+ A AK F LT+I D++
Sbjct: 226 LAGCDYLQSGLPGVGISTA---------------------AKFFSLTSIKDLRT 258
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV Y +Y+ LL V+MVFDGR LPAK+ T +DRR++ E R K+ A LL G
Sbjct: 55 YVTYVNRYVKELLDMGCHVVMVFDGRPLPAKKGTNDDRREQREKR-KEHAEMLLAKG 110
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 87 SGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDY-WTGIKGMGLKKAKDYVFS 143
+G C ++ L L KF KFR +CIL+GCDY +G+ G+G+ A +
Sbjct: 191 TGECSVYEKCNLKKCFTGELGGDKFDFVKFRRICILAGCDYLQSGLPGVGISTAAKFFSL 250
Query: 144 IMDPDFENALRKINVY 159
D L+K+ Y
Sbjct: 251 TSIKDLRTVLKKVPYY 266
>gi|403371708|gb|EJY85737.1| XPG family protein [Oxytricha trifallax]
Length = 734
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC------CFMDREKLPSALKMPLAKFTDAK 254
G AD+ I+EDSDL+ +G K++ KL+ +G C F ++ L K + +
Sbjct: 162 GIADFAISEDSDLIAYGCPKLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQ 221
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVF 303
F +CI++GC+Y I+ +GLK A +F + D E E +K K+F
Sbjct: 222 FVQICIMAGCEYLPSIQQVGLKVAIK-LFMKNNGDVEQVLESLKTNKIF 269
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHK---QKAAE 72
++ Y +K + ++ + IK I VFDG+HL AKEATE+ R ++ + QKA +
Sbjct: 55 FLAYPLKMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAED 109
>gi|303391387|ref|XP_003073923.1| exonuclease 1 [Encephalitozoon intestinalis ATCC 50506]
gi|303303072|gb|ADM12563.1| exonuclease 1 [Encephalitozoon intestinalis ATCC 50506]
Length = 363
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY DY++TEDSDL+ +G+ +I+YK D + RE S L K + + I
Sbjct: 162 GYIDYILTEDSDLIPYGSNRILYKFDNT-----FVREFSRSCLAEVRGKDFEENILDISI 216
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILD 310
LSGCDY + I+G+G+ A + + E EY+K+ K P + D
Sbjct: 217 LSGCDYLSSIQGVGIVTAHKLLSR--ERTIERVVEYLKHRKPVPKNYLDD 264
>gi|302308357|ref|NP_985242.2| AER387Cp [Ashbya gossypii ATCC 10895]
gi|299789416|gb|AAS53066.2| AER387Cp [Ashbya gossypii ATCC 10895]
gi|374108467|gb|AEY97374.1| FAER387Cp [Ashbya gossypii FDAG1]
Length = 655
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSG---NCCFMDREKLPSALKMPLAKFTDAKFR 256
+G +I+EDSDLLVFG +++I KL+ G C D LP K PL ++ R
Sbjct: 162 SGLVQGIISEDSDLLVFGCRRLITKLNDYGEGFEICRDDFVHLPD--KFPLNSLGESGLR 219
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
M L+GCDY GI +GL A
Sbjct: 220 TMVCLAGCDYTKGIPQVGLLTA 241
>gi|297734295|emb|CBI15542.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 14/110 (12%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL-PSALKMP-LAKFTDAKFRYMCILSG 263
VITEDSDL+ +G + II+K+D GN M +++ S + P F F MC+L+G
Sbjct: 152 VITEDSDLMAYGCRAIIFKMDRYGNGEEMVLDRVFDSVARAPSFQNFDKELFTGMCVLAG 211
Query: 264 CDYWTGIKGMGLKKA---------KDYVFSIMDPDFENRKEYVK-YAKVF 303
CD+ + G+G+ +A D V S++ FE R + + Y K F
Sbjct: 212 CDFLPSVPGIGIARAYSMVAKYRNLDRVLSVL--KFEKRNQMPEDYTKSF 259
>gi|403348528|gb|EJY73701.1| XPG family protein [Oxytricha trifallax]
Length = 734
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC------CFMDREKLPSALKMPLAKFTDAK 254
G AD+ I+EDSDL+ +G K++ KL+ +G C F ++ L K + +
Sbjct: 162 GIADFAISEDSDLIAYGCPKLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQ 221
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVF 303
F +CI++GC+Y I+ +GLK A +F + D E E +K K+F
Sbjct: 222 FVQICIMAGCEYLPSIQQVGLKVAI-KLFMKNNGDVEQVLESLKTNKIF 269
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHK---QKAAE 72
++ Y +K + ++ + IK I VFDG+HL AKEATE+ R ++ + QKA +
Sbjct: 55 FLAYPLKMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAED 109
>gi|403337691|gb|EJY68068.1| XPG family protein [Oxytricha trifallax]
Length = 719
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC------CFMDREKLPSALKMPLAKFTDAK 254
G AD+ I+EDSDL+ +G K++ KL+ +G C F ++ L K + +
Sbjct: 162 GIADFAISEDSDLIAYGCPKLLMKLNFNGYCKVFSINDFKANNQITDQTLAYLQKTSREQ 221
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVF 303
F +CI++GC+Y I+ +GLK A +F + D E E +K K+F
Sbjct: 222 FVQICIMAGCEYLPSIQQVGLKVAI-KLFMKNNGDVEQVLESLKTNKIF 269
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHK---QKAAE 72
++ Y +K + ++ + IK I VFDG+HL AKEATE+ R ++ + QKA +
Sbjct: 55 FLAYPLKMLKLVQTYGIKPICVFDGQHLKAKEATEKVRSHNKQVNKELAMQKAED 109
>gi|269861368|ref|XP_002650394.1| exonuclease I [Enterocytozoon bieneusi H348]
gi|220066165|gb|EED43662.1| exonuclease I [Enterocytozoon bieneusi H348]
Length = 327
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N Y D++++EDSDL+ +GAK +++K N F+D K L F
Sbjct: 159 NKINYVDHIMSEDSDLICYGAKSVLFKY----NGIFVDHYK-SEDLSKAYGSFFAKNILD 213
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+CILSGCDY IKG+GL A
Sbjct: 214 ICILSGCDYINSIKGIGLITA 234
>gi|359491497|ref|XP_002278082.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
Length = 541
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 14/110 (12%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL-PSALKMP-LAKFTDAKFRYMCILSG 263
VITEDSDL+ +G + II+K+D GN M +++ S + P F F MC+L+G
Sbjct: 174 VITEDSDLMAYGCRAIIFKMDRYGNGEEMVLDRVFDSVARAPSFQNFDKELFTGMCVLAG 233
Query: 264 CDYWTGIKGMGLKKAK---------DYVFSIMDPDFENRKEYVK-YAKVF 303
CD+ + G+G+ +A D V S++ FE R + + Y K F
Sbjct: 234 CDFLPSVPGIGIARAYSMVAKYRNLDRVLSVL--KFEKRNQMPEDYTKSF 281
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKR 61
Y+ Y M I++L +KI ++VFDG ++P K TE++R RKR
Sbjct: 58 YLQYFMHRIDLLRHYKITPVVVFDGGNIPCKATTEQERYRKR 99
>gi|407042604|gb|EKE41429.1| exonuclease, putative [Entamoeba nuttalli P19]
Length = 497
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMC 259
GY D +I EDSDL+V G K+I++K + E L S L K FT Y C
Sbjct: 160 GYVDAIICEDSDLIVHGCKRILFKFNKFDETV---EEFLSSELDKTDFKGFTRNMLVYSC 216
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+L+GCDY I +G+KKA
Sbjct: 217 VLAGCDYCKNISKVGIKKA 235
>gi|393244253|gb|EJD51765.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 320
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D V +EDSDL+VFG +K++ KL G C + L + + R M +
Sbjct: 162 GLIDAVYSEDSDLVVFGVQKLVCKLQDDGACAIVRHADL---------SVSHSHLRLMAL 212
Query: 261 LSGCDYWTGIKGMGLKKA 278
L+GCDY G+ G+GL A
Sbjct: 213 LAGCDYTRGLPGVGLATA 230
>gi|298708646|emb|CBJ26133.1| exonuclease, putative; 92014-93872 [Ectocarpus siliculosus]
Length = 587
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D V++EDSD L +G KK+++K+D G+ + L + + L+ + ++ F +C+
Sbjct: 162 GAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCL 221
Query: 261 LSGCDYW-TGIKGMGLKKA 278
L GCDY + +KG+G+ A
Sbjct: 222 LVGCDYIPSSVKGLGIATA 240
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEI 64
YV +CMK +N+LL H I+ +MVFDG LP K + +RR++ E
Sbjct: 55 YVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRET 98
>gi|167378003|ref|XP_001734628.1| exodeoxyribonuclease [Entamoeba dispar SAW760]
gi|165903747|gb|EDR29180.1| exodeoxyribonuclease, putative [Entamoeba dispar SAW760]
Length = 497
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMC 259
GY D +I EDSDL+V G K+I++K + E L S L K FT Y C
Sbjct: 160 GYVDAIICEDSDLIVHGCKRILFKFNKFDETV---EEFLSSDLDKTDFKGFTRNMLVYSC 216
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+L+GCDY I +G+KKA
Sbjct: 217 VLAGCDYCKNISKVGIKKA 235
>gi|67463104|ref|XP_648209.1| exonuclease I [Entamoeba histolytica HM-1:IMSS]
gi|56464258|gb|EAL42821.1| exonuclease I, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702558|gb|EMD43178.1| exodeoxyribonuclease, putative [Entamoeba histolytica KU27]
Length = 497
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMC 259
GY D +I EDSDL+V G K+I++K + E L S L K FT Y C
Sbjct: 160 GYVDAIICEDSDLIVHGCKRILFKFNKFDETV---EEFLSSDLDKTDFKGFTRNMLVYSC 216
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+L+GCDY I +G+KKA
Sbjct: 217 VLAGCDYCKNISKVGIKKA 235
>gi|297844758|ref|XP_002890260.1| hypothetical protein ARALYDRAFT_889222 [Arabidopsis lyrata subsp.
lyrata]
gi|297336102|gb|EFH66519.1| hypothetical protein ARALYDRAFT_889222 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSG-------NCCFMDREKLPSALKMPLAKFTDAKFRYM 258
VITEDSDLL +G K +I+K+D G + F ++ PS F F M
Sbjct: 174 VITEDSDLLAYGCKAVIFKMDRYGKGEELILDNVFQAVDQKPS-----FQNFDQELFTAM 228
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
C+L+GCD+ + G+G+ +A ++
Sbjct: 229 CVLAGCDFLPSVPGVGISRAHAFI 252
>gi|9719724|gb|AAF97826.1|AC034107_9 Contains similarity to exonuclease ExoI from Xenopus laevis
gb|AF134570 and contains XPG N-terminal PF|00752 and
I-region PF|00867 domains. EST gb|AV565414 comes from
this gene [Arabidopsis thaliana]
Length = 567
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSG-------NCCFMDREKLPSALKMPLAKFTDAKFRYM 258
VITEDSDLL +G K +I+K+D G + F ++ PS F F M
Sbjct: 164 VITEDSDLLAYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPS-----FQNFDQELFTAM 218
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
C+L+GCD+ + G+G+ +A ++
Sbjct: 219 CVLAGCDFLPSVPGVGISRAHAFI 242
>gi|366992229|ref|XP_003675880.1| hypothetical protein NCAS_0C05260 [Naumovozyma castellii CBS 4309]
gi|342301745|emb|CCC69516.1| hypothetical protein NCAS_0C05260 [Naumovozyma castellii CBS 4309]
Length = 412
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFM---DREKLPSALKMPLAKFTDAKFRYMCILS 262
+I+EDSDL+VFG+K++I KL+ G C + D L K P + + + R + LS
Sbjct: 167 IISEDSDLIVFGSKRLITKLNEFGECIEIASCDFGDLTG--KFPFGELSMDQIRMLVCLS 224
Query: 263 GCDYWTGIKGMGLKKAKDYV--FSIMDPDFENRKEYVKYA 300
GCDY GI +GL A V F MD + KE KY+
Sbjct: 225 GCDYTVGIWKIGLVTAIKLVRQFDNMDDIVNHIKESGKYS 264
>gi|30685678|ref|NP_849684.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|332191554|gb|AEE29675.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 577
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSG-------NCCFMDREKLPSALKMPLAKFTDAKFRYM 258
VITEDSDLL +G K +I+K+D G + F ++ PS F F M
Sbjct: 174 VITEDSDLLAYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPS-----FQNFDQELFTAM 228
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
C+L+GCD+ + G+G+ +A ++
Sbjct: 229 CVLAGCDFLPSVPGVGISRAHAFI 252
>gi|18394573|ref|NP_564047.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|15215782|gb|AAK91436.1| At1g18090/T10F20_6 [Arabidopsis thaliana]
gi|21360461|gb|AAM47346.1| At1g18090/T10F20_6 [Arabidopsis thaliana]
gi|332191553|gb|AEE29674.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 577
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSG-------NCCFMDREKLPSALKMPLAKFTDAKFRYM 258
VITEDSDLL +G K +I+K+D G + F ++ PS F F M
Sbjct: 174 VITEDSDLLAYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPS-----FQNFDQELFTAM 228
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV 282
C+L+GCD+ + G+G+ +A ++
Sbjct: 229 CVLAGCDFLPSVPGVGISRAHAFI 252
>gi|405118233|gb|AFR93007.1| exonuclease [Cryptococcus neoformans var. grubii H99]
Length = 997
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 38/144 (26%)
Query: 26 MKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG-------- 77
M + L H I+ +VFDG LPAK+ TE R K + + +KA L G
Sbjct: 1 MYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAK-SRSDNLEKARSLEAQGRIKEAKEA 59
Query: 78 --------SSIIYKL----------------DLSGNCCFMDREKLPSALKMPLAKFTDAK 113
+ Y+L + CF++RE + P+ +TD
Sbjct: 60 YTRCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQLCFLEREG-----EFPMHGWTDMH 114
Query: 114 FRYMCILSGCDYWTGIKGMGLKKA 137
FR M +LSGCDY I G+G+K A
Sbjct: 115 FRRMAMLSGCDYLNSIPGIGIKTA 138
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 221 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
++ + CF++RE + P+ +TD FR M +LSGCDY I G+G+K A
Sbjct: 86 VVAPYEADAQLCFLEREG-----EFPMHGWTDMHFRRMAMLSGCDYLNSIPGIGIKTA 138
>gi|326506138|dbj|BAJ91308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPL--AKFTDAKFRYMCILSG 263
VITEDSDL+ +G II+K+D GN EK +K L F F MC+L+G
Sbjct: 174 VITEDSDLIAYGCTAIIFKMDRFGNGEEFIMEKTLETVKDGLCFQDFDQNLFTGMCVLAG 233
Query: 264 CDYWTGIKGMGLKKA 278
CD+ + G+G K+A
Sbjct: 234 CDFLPSVPGIGTKRA 248
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEI 64
Y++Y M ++N+L HK+ ++VFDG +P K AT+EDR K+ E+
Sbjct: 58 YISYFMHHVNLLRHHKVVPVVVFDGGSMPCKSATDEDRHKKREL 101
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPL--AKFTDAKFRYMCILSGCDYWTGIKGMGLK 135
++II+K+D GN EK +K L F F MC+L+GCD+ + G+G K
Sbjct: 187 TAIIFKMDRFGNGEEFIMEKTLETVKDGLCFQDFDQNLFTGMCVLAGCDFLPSVPGIGTK 246
Query: 136 KA 137
+A
Sbjct: 247 RA 248
>gi|339239601|ref|XP_003381355.1| putative translation initiation factor IF-2 [Trichinella spiralis]
gi|316975619|gb|EFV59029.1| putative translation initiation factor IF-2 [Trichinella spiralis]
Length = 1569
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G A VI+EDSDL+ FG K+++K+D+ GN ++EKL A+ +P
Sbjct: 471 GIAHLVISEDSDLIPFGCSKVLFKMDMLGNGVLYEKEKLHLAMNVP-------------- 516
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
CDY + G+G+KK+ + D D
Sbjct: 517 EESCDYLENLPGIGIKKSIKFFQKAFDVD 545
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +C K+I +LL++ I+VIMVFDGR++PAK+ T R++R + K+K L SG
Sbjct: 368 YVKFCCKWIKVLLSYNIRVIMVFDGRNVPAKKDTNNARKERRQ-SLKEKGQALSKSG 423
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 78 SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
S +++K+D+ GN ++EKL A+ +P CDY + G+G+KK+
Sbjct: 489 SKVLFKMDMLGNGVLYEKEKLHLAMNVPE--------------ESCDYLENLPGIGIKKS 534
Query: 138 KDYVFSIMDPDFENALRKINVY 159
+ D D AL KI Y
Sbjct: 535 IKFFQKAFDVDIRKALPKIPSY 556
>gi|66475418|ref|XP_627525.1| exonuclease i/din7p-like; xeroderma pigmentosum G N-region plus
xeroderma pigmentosum G I-region plus HhH2 domain
[Cryptosporidium parvum Iowa II]
gi|32398743|emb|CAD98703.1| XPG (rad-related) exonuclease, possible [Cryptosporidium parvum]
gi|46228981|gb|EAK89830.1| exonuclease i/din7p-like; xeroderma pigmentosum G N-region plus
xeroderma pigmentosum G I-region plus HhH2 domain
[Cryptosporidium parvum Iowa II]
Length = 482
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKL-DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
Y D VITEDSD+LVFG+ IYK D +GNC + + L + + F+ F CI
Sbjct: 167 YIDAVITEDSDMLVFGSICTIYKYDDKTGNCRVIYWKDLYKSGVISQLMFSYETFVLGCI 226
Query: 261 LSGCDYWTGIKGMGLKKA 278
L+GCDY +G+G+K A
Sbjct: 227 LTGCDYVKSPQGVGIKTA 244
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
+++NYC++ I L + + VFDG LP K TEE+R KR
Sbjct: 54 VHINYCIEKIRTLQGKGLIPVCVFDGATLPMKRVTEEERSKR 95
>gi|67609355|ref|XP_666944.1| XPG (rad-related) exonuclease [Cryptosporidium hominis TU502]
gi|54658021|gb|EAL36714.1| XPG (rad-related) exonuclease [Cryptosporidium hominis]
Length = 482
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKL-DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
Y D VITEDSD+LVFG+ IYK D +GNC + + L + + F+ F CI
Sbjct: 167 YIDAVITEDSDMLVFGSICTIYKYDDKTGNCRVIYWKDLYKSGVISQLMFSYETFVLGCI 226
Query: 261 LSGCDYWTGIKGMGLKKA 278
L+GCDY +G+G+K A
Sbjct: 227 LTGCDYVKSPQGVGIKTA 244
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
+++NYC++ I L + + VFDG LP K TEE+R KR
Sbjct: 54 VHINYCIEKIRTLQGKGLIPVCVFDGATLPMKRVTEEERSKR 95
>gi|19074876|ref|NP_586382.1| EXONUCLEASE 1 [Encephalitozoon cuniculi GB-M1]
gi|19069601|emb|CAD25986.1| EXONUCLEASE 1 [Encephalitozoon cuniculi GB-M1]
Length = 366
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D ++TEDSDL+ +G+ K++YK D S +RE L S +K K + + I
Sbjct: 162 GYIDCILTEDSDLIPYGSSKVLYKFD-SAFVQEFNRECL-SEVK---GKDFEENILDISI 216
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWY 318
LSGCDY I+G+G+ A + + E EY+KY K P + + D K +
Sbjct: 217 LSGCDYLASIQGVGVVTA--HRLLSREKTVERVVEYLKYRKPVPSSYLEDFSRAKKTF 272
>gi|145354983|ref|XP_001421753.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581991|gb|ABP00047.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 333
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 180 PFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMD-REK 238
P+ A SL ER G D V TEDSDL+ +G ++++KL+ SG+ +
Sbjct: 158 PYEADATIASLALTAKER---GGVDLVFTEDSDLVAYGCPRVVFKLEKSGDAKELRLATN 214
Query: 239 LPSALKMPLAKFTDAK---FRYMCILSGCDYWTGIKGMGLKK 277
P + P FT F +C+LSGCD+ I+G+G+KK
Sbjct: 215 KPKSKGPPPLDFTGWDYELFLSLCVLSGCDFLDNIRGLGIKK 256
>gi|449328623|gb|AGE94900.1| exonuclease 1 [Encephalitozoon cuniculi]
Length = 366
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D ++TEDSDL+ +G+ K++YK D S +RE L S +K K + + I
Sbjct: 162 GYIDCILTEDSDLIPYGSSKVLYKFD-SAFVREFNRECL-SEVK---GKDFEENILDISI 216
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWY 318
LSGCDY I+G+G+ A + + E EY+KY K P + + D K +
Sbjct: 217 LSGCDYLASIQGVGVVTA--HRLLSREKTVERVVEYLKYRKPVPSSYLEDFSRAKKTF 272
>gi|255080028|ref|XP_002503594.1| predicted protein [Micromonas sp. RCC299]
gi|226518861|gb|ACO64852.1| predicted protein [Micromonas sp. RCC299]
Length = 309
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 189 SLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA 248
+ L+ + + G D V TEDSDL+ +G +++KLD S K K PL
Sbjct: 163 AALAQLGAKGDPGGVDIVFTEDSDLVAYGCPLVLFKLDKS---------KAGGGAKGPLN 213
Query: 249 --KFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ +F +C+LSGCD+ I+G+G+KKA V
Sbjct: 214 FIGWKHEQFLELCVLSGCDFLPNIRGIGIKKAHALV 249
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 93 MDREKLPSALKMPLA--KFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 141
+D+ K K PL + +F +C+LSGCD+ I+G+G+KKA V
Sbjct: 199 LDKSKAGGGAKGPLNFIGWKHEQFLELCVLSGCDFLPNIRGIGIKKAHALV 249
>gi|356522842|ref|XP_003530052.1| PREDICTED: exonuclease 1-like [Glycine max]
Length = 575
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSG 263
VITEDSDL+ +G II+K+D GN ++ EK+ SA + F MC+L+G
Sbjct: 174 VITEDSDLIAYGCPAIIFKMDRHGNGERIELEKVFSAESGRPSFRSFNMKLLTGMCVLAG 233
Query: 264 CDYWTGIKGMGLKKAKDYV 282
CD+ + G+G+ +A V
Sbjct: 234 CDFLPSVPGIGIARAHALV 252
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKRAEIRH 66
Y++Y M +N+L +KI ++VFDG ++P K ATEE+R RKR R
Sbjct: 58 YIDYFMHRVNLLRFYKITPVVVFDGCNVPCKAATEEERNRKRRANRE 104
>gi|399217832|emb|CCF74719.1| unnamed protein product [Babesia microti strain RI]
Length = 434
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 27/135 (20%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSG--------NCCFMDREKLPSALKMP----- 246
G A+ ++EDSDLLV+G +++YKL G C + R+ PS + P
Sbjct: 163 TGVANIAVSEDSDLLVYGCPRVLYKLGKDGYAEEVNIVTICHLPRQISPSYPRGPKPSGN 222
Query: 247 ---LAKFTDAKFRYMCILSGCDYWTG--IKGMGLK---------KAKDYVFSIMDPDFEN 292
L FT F MCILSG DY I GMG+ K+ D + ++ D
Sbjct: 223 IAMLKDFTPEMFATMCILSGSDYDNNAHIHGMGIVMAYKIVSKYKSIDAIMEFLETDSNW 282
Query: 293 RKEYVKYAKVFPLTA 307
+ + ++ + LTA
Sbjct: 283 KDKLPQHLSIEQLTA 297
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
Y+ + + +N+L+ H I IMVFDG+ LPAKE RR+R + + K++A + SG
Sbjct: 55 YLKFILSMLNLLILHGITPIMVFDGKELPAKEQENNKRRERRQ-QAKEEALRMYKSG 110
>gi|428672546|gb|EKX73459.1| flap endonuclease-1, putative [Babesia equi]
Length = 746
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 20/126 (15%)
Query: 162 IGSYVKITKEFLTS--------GAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDL 213
+G VK++KE S G P A+ E + + + + G A V +EDSD
Sbjct: 129 VGRTVKVSKEQNNSAKQLLRLMGIPV-VEAKEEAEAQCAQLVQE---GIATAVASEDSDS 184
Query: 214 LVFGAKKIIYKLDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKG 272
LVFG + ++ +LSG +D+EK+ S L A+FTD CIL GCDY IKG
Sbjct: 185 LVFGCRILLR--NLSGKKVLRIDQEKVLSLLGFTRAQFTD-----FCILCGCDYCGTIKG 237
Query: 273 MGLKKA 278
+G K A
Sbjct: 238 IGPKNA 243
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 48 LPAKEATEEDRRKRAEIRHKQKAAELLHSGS-SIIYKL-----DLSGNCCF-MDREKLPS 100
+P EA EE + A++ + A + S S+++ +LSG +D+EK+ S
Sbjct: 152 IPVVEAKEEAEAQCAQLVQEGIATAVASEDSDSLVFGCRILLRNLSGKKVLRIDQEKVLS 211
Query: 101 ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
L A+FTD CIL GCDY IKG+G K A
Sbjct: 212 LLGFTRAQFTD-----FCILCGCDYCGTIKGIGPKNA 243
>gi|323450159|gb|EGB06042.1| hypothetical protein AURANDRAFT_29882, partial [Aureococcus
anophagefferens]
Length = 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL----PSALKMPLAKFTDAKF 255
+G A +++EDSD L +G ++++KLD G+ + L P + + +T F
Sbjct: 164 SGEAAAIVSEDSDNLAYGVPRVLFKLDADGSAQQVVLADLFAAGPGVNALDVRGWTQDMF 223
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
MC L+GCDY +KG+G+K A V D
Sbjct: 224 VTMCALAGCDYVEAVKGVGIKNAHRLVARYKD 255
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 80 IIYKLDLSGNCCFMDREKL----PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK 135
+++KLD G+ + L P + + +T F MC L+GCDY +KG+G+K
Sbjct: 185 VLFKLDADGSAQQVVLADLFAAGPGVNALDVRGWTQDMFVTMCALAGCDYVEAVKGVGIK 244
Query: 136 KAKDYVFSIMD 146
A V D
Sbjct: 245 NAHRLVARYKD 255
>gi|388579186|gb|EIM19513.1| hypothetical protein WALSEDRAFT_30313 [Wallemia sebi CBS 633.66]
Length = 1226
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAA------ELL 74
Y+ +K IN + IK+I VFDG++ +++ E RR+ + + +++ E L
Sbjct: 872 YILSYLKLINDARNNGIKLIAVFDGKNRLSQKHRESLRREESRLLGQRRLDAEIARYERL 931
Query: 75 HSGSSIIYKLD-----LSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
+S +I + D + + ++ L P +L+G + W
Sbjct: 932 NSFQELITRKDSKYTTIDQDIAYLKENALKENNLTP----------SQLLLNGQE-WELY 980
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGK----IGSYVKITKEFLTSGAPQPFGARN 185
+ + K + S + I Y K +Y ++ + +G P ++
Sbjct: 981 QNISNDTTKGDIHSQIASLKLTTNETIIRYSKKPPSSSTYERVRQLLKAAGVPTFIVDQD 1040
Query: 186 ---EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 242
EG +L SA+ R G+ADYV++ED+D+L++GAK I + + +D L SA
Sbjct: 1041 PVHEGEALASAIVLR---GHADYVLSEDTDVLIYGAKMIRESV---KSLRIVDGSLLHSA 1094
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
L + + T K +LSG D+ I +G +A Y+
Sbjct: 1095 LGLTKRELTHKKLIDFALLSGTDFSITIPSIGPIRALKYI 1134
>gi|357124321|ref|XP_003563849.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 556
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSG 263
VITEDSDL+ +G II+K+D GN +K +K L+ F F MC+L+G
Sbjct: 174 VITEDSDLIAYGCTAIIFKMDRFGNGEEFIMKKTMETVKDGLSFKDFDQNLFTGMCVLAG 233
Query: 264 CDYWTGIKGMGLKKA 278
CD+ + G+G K+A
Sbjct: 234 CDFLPSVPGIGTKRA 248
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEI 64
Y++Y M +IN+L HK+ ++VFDG +P K AT++DR K+ ++
Sbjct: 58 YISYFMHHINLLRHHKVVPVVVFDGCSMPCKSATDKDRHKKRDL 101
>gi|256271259|gb|EEU06336.1| Din7p [Saccharomyces cerevisiae JAY291]
Length = 430
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +F +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFLNL 220
Query: 259 CILSGCDYWTGIKGMGLKKA 278
L+GCDY +GI +G+ A
Sbjct: 221 VCLAGCDYTSGIWKVGVVTA 240
>gi|118395354|ref|XP_001030028.1| XPG I-region family protein [Tetrahymena thermophila]
gi|89284313|gb|EAR82365.1| XPG I-region family protein [Tetrahymena thermophila SB210]
Length = 822
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKL-----DLSGNCCFMDREKLPSALKMPLAKFTDAKFR 256
Y D V +EDSDLL FG KK+++KL +G+ +D K + M L + F
Sbjct: 151 YVDVVFSEDSDLLAFGCKKVLFKLYKGDNKETGDEISLDNIKNCKEINMSL--WNHNMFL 208
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
CI SGCDY +K MG++ A
Sbjct: 209 TACIFSGCDYLPSLKKMGIQTA 230
>gi|303272353|ref|XP_003055538.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463512|gb|EEH60790.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 312
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK---FRYMCI 260
D V TEDSDL+ +G +++KLD F D ++L A PL FT F +C+
Sbjct: 177 DVVFTEDSDLVAYGCPSVLFKLDK-----FGDAQELRIADGAPL-NFTGWSMDLFLGLCV 230
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
LSGCD+ ++G+G+KKA V
Sbjct: 231 LSGCDFLPNVRGIGIKKAHALV 252
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 8 WWKTNLKKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHK 67
WW + YV YC+ ML I ++VFDG LPAK E++RR R
Sbjct: 52 WWARAKRDAP---YVRYCVHRAQMLRHFGITPVIVFDGDRLPAKGGEEKERRDR------ 102
Query: 68 QKAAELLHSGSSIIYKLDLSGNCCFM 93
AE L G + D G F
Sbjct: 103 --RAEALRKGHERLAARDREGAAFFF 126
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 79 SIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK---FRYMCILSGCDYWTGIKGMGLK 135
S+++KLD F D ++L A PL FT F +C+LSGCD+ ++G+G+K
Sbjct: 193 SVLFKLDK-----FGDAQELRIADGAPL-NFTGWSMDLFLGLCVLSGCDFLPNVRGIGIK 246
Query: 136 KAKDYV 141
KA V
Sbjct: 247 KAHALV 252
>gi|124802099|ref|XP_001347365.1| endonuclease, putative [Plasmodium falciparum 3D7]
gi|23494944|gb|AAN35278.1|AE014830_22 endonuclease, putative [Plasmodium falciparum 3D7]
Length = 388
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 59 RKRAEIRHKQKAAELLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 118
++R IR K+ ++L+ SS L + N D + + F+
Sbjct: 124 KERETIRKKKNLFDILNVDSSKNNILKSNDNINVNDTNTINNT------------FKKNN 171
Query: 119 ILSG--CDYWTGIKGMGLKKA---KDYVFSIMDPDFENALRKINVYGKIGSYV--KITKE 171
I++ CD I + KK K+ + I+D D + L K N++ KI S I
Sbjct: 172 IVNNFLCDQKNNISNICEKKNLKKKNQMEIIVDEDGIHDLFKKNIFIKINSKTANDIYNY 231
Query: 172 FLTSGAPQPFGARN--EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG 229
L P F +N E + ER D V+++D+D L FGA +I +
Sbjct: 232 LLLENIP-IFITKNDAEKECAIQCSHER------DIVVSDDTDALAFGAPNLIRFITNKK 284
Query: 230 NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+++E+L + L + +F D CILSGCDY I G+G KA + +
Sbjct: 285 KRHIINKEELLNELNINYEQFID-----FCILSGCDYSAKIPGIGPVKAHEII 332
>gi|401828054|ref|XP_003888319.1| putative exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392999591|gb|AFM99338.1| putative exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 366
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D ++TEDSDL+ +G+ +I+YK D C F+ +E L K + + I
Sbjct: 162 GYIDCILTEDSDLIPYGSNRILYKFD----CTFV-QEFTRDCLTEARGKDFEENILDISI 216
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFP 304
LSGCDY I+G+G+ A + + E EY+++ K P
Sbjct: 217 LSGCDYLASIQGIGVVTAHKLLSR--EKTVEGVIEYLRHRKPVP 258
>gi|300175835|emb|CBK21831.2| unnamed protein product [Blastocystis hominis]
Length = 276
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQ 68
YVNYCM+++N+LL + I I+VFDG LP KEAT +R+++ + K+
Sbjct: 64 YVNYCMRFVNLLLQNDIVPIIVFDGADLPIKEATNNERKEKRSLALKR 111
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGS--YVKITKEFLTSGAP---QPFGAR 184
+ + LK+AK+Y + D +NAL + I Y+ + KE + P+ A
Sbjct: 105 RSLALKRAKEYE---ANCDVKNALIYYSSAVDITPDLYIPLIKELIAHNISYIVAPYEAD 161
Query: 185 NEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK 244
E L+ ++ N+ D+VIT DSDL+ FG KI++ L+ G R+ L +
Sbjct: 162 AE----LAYLSRMNLV---DFVITIDSDLIAFGCSKILFDLNNQGAGFEFSRKDLFLSES 214
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKK 277
+ +FT+ IL GCDY K G K+
Sbjct: 215 LSFTQFTEEMALCFFILLGCDYLKNPKQWGWKR 247
>gi|223996849|ref|XP_002288098.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977214|gb|EED95541.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 672
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLD--LSGNCC-----------FMDREKLPSALKMP 246
G D V+TEDSDL+ G +++Y+L GN + R L S+ +
Sbjct: 322 GGLVDLVVTEDSDLIALGVPRLVYRLGGWNGGNSANRSSSSGLKGTILQRRDLGSSHGID 381
Query: 247 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
L F+D M + +GCDY +KG+G+ A+ V
Sbjct: 382 LMDFSDGMLATMFVATGCDYCDSLKGVGIITARGIV 417
>gi|71423277|ref|XP_812404.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877180|gb|EAN90553.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 760
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
GY V++EDSDL+ + +I KLD G C + + LP + P + F C
Sbjct: 190 GYVQAVVSEDSDLIAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGC 246
Query: 260 ILSGCDYWTGIKGMGLKKA 278
ILSGCDY ++ +G+KKA
Sbjct: 247 ILSGCDYLPSLRHIGVKKA 265
>gi|71413355|ref|XP_808820.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873103|gb|EAN86969.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 762
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
GY V++EDSDL+ + +I KLD G C + + LP + P + F C
Sbjct: 190 GYVQAVVSEDSDLIAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGC 246
Query: 260 ILSGCDYWTGIKGMGLKKA 278
ILSGCDY ++ +G+KKA
Sbjct: 247 ILSGCDYLPSLRHIGVKKA 265
>gi|407867753|gb|EKG08658.1| hypothetical protein TCSYLVIO_000184 [Trypanosoma cruzi]
Length = 761
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
GY V++EDSDL+ + +I KLD G C + + LP + P + F C
Sbjct: 190 GYVQAVVSEDSDLIAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGC 246
Query: 260 ILSGCDYWTGIKGMGLKKA 278
ILSGCDY ++ +G+KKA
Sbjct: 247 ILSGCDYLPSLRHIGVKKA 265
>gi|407394233|gb|EKF26855.1| hypothetical protein MOQ_009436 [Trypanosoma cruzi marinkellei]
Length = 772
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
GY V++EDSDL+ + +I KLD G C + + LP + P + F C
Sbjct: 190 GYVQAVVSEDSDLIAYHCPCLIAKLDAHGGCEVLFAQDLP---RCPSFYGLSYESFLVGC 246
Query: 260 ILSGCDYWTGIKGMGLKKA 278
ILSGCDY ++ +G+KKA
Sbjct: 247 ILSGCDYLPSLRHIGVKKA 265
>gi|300121855|emb|CBK22429.2| DNA repair protein (XPGC) [Blastocystis hominis]
Length = 389
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
G D V+++DSD L F ++YKL +G C + EKL + + +T F ++C
Sbjct: 100 TGIVDAVMSDDSDSLCFRCPCVLYKLTDTGICKEVCLEKLLHSDEFTSFPWTCDLFEFLC 159
Query: 260 ILSGCDYWTGIKGMGLKKAKDYV 282
ILSGCDY + + LK AK Y+
Sbjct: 160 ILSGCDYLDNLPYIRLKTAKKYI 182
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 139
++YKL +G C + EKL + + +T F ++CILSGCDY + + LK AK
Sbjct: 121 VLYKLTDTGICKEVCLEKLLHSDEFTSFPWTCDLFEFLCILSGCDYLDNLPYIRLKTAKK 180
Query: 140 YV 141
Y+
Sbjct: 181 YI 182
>gi|123488984|ref|XP_001325288.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
gi|121908185|gb|EAY13065.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
Length = 402
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 181 FGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP 240
F A E + LS + I D+VITEDSDL+ + I++LD GNC + L
Sbjct: 145 FVAPYEADAQLSYLARNKIC---DFVITEDSDLIPYECPLTIFRLDSDGNCDAISYADL- 200
Query: 241 SALKMPLAK-FTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ +P+ K FT C+LSGCDY G++ A
Sbjct: 201 --INVPILKSFTPRMILEACVLSGCDYLPSAPNFGIRTA 237
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 14 KKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHK--QKAA 71
K L Y+++ MK ML+ + IK I+VFDGR LPAK T E RR +R+ QKA
Sbjct: 48 KNLPCKSYISFFMKRAQMLIDNGIKPIIVFDGRELPAKIGTNEKRRA---LRNTSLQKAD 104
Query: 72 ELLHSGSS 79
EL G S
Sbjct: 105 ELERRGLS 112
>gi|123494006|ref|XP_001326419.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121909333|gb|EAY14196.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 414
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 150 ENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIA--------- 200
E AL K + +IG+ + K + + A P + L E +A
Sbjct: 97 EQALEKARYFEQIGNNAEAFKNYQKAVAITPETVHTWIQELQRNAVEYFVAPYEADAQLV 156
Query: 201 -----GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
GY D V++EDSDL+ + + K D + + +D + + + +P FT
Sbjct: 157 YLAKSGYVDAVLSEDSDLIAYQCPTTLLKFDDTYHVLQIDFQNVLKLIGLPADTFTS--- 213
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDP 288
+CIL+GCDY I +G K A ++ DP
Sbjct: 214 --LCILAGCDYIDHIDKLGPKTALKFLKDKNDP 244
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
L + Y M +N ++ IK I++FDG++LP+K+ T E R++ E
Sbjct: 54 LLLPYLMSKVNGIINCGIKPIIIFDGQNLPSKQITTEKRKQERE 97
>gi|449503133|ref|XP_004161850.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 578
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 154 RKINVYGKIGSY-VKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSD 212
R +N+ I + +K+ +E P+ A + L S T + G VITEDSD
Sbjct: 125 RAVNITPSIANQLIKLLREHDIEFVVAPYEADAQLAYLSSLGT---LNGGIAAVITEDSD 181
Query: 213 LLVFGAKKIIYKLDLSGNCCFMDREKL-PSALKMPLAK-FTDAKFRYMCILSGCDYWTGI 270
++ +G K I+K+D GN M +K+ SA P K F MC+L+GCD+ +
Sbjct: 182 MIAYGCKATIFKMDRYGNGEEMMLDKIFDSAGCTPSFKDFDKELLTGMCVLAGCDFLPSV 241
Query: 271 KGMGLKKA 278
G+G+ +A
Sbjct: 242 PGIGIARA 249
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y++YCM IN+L ++I ++VFDG ++P K T ++R + + ++++ A E L G+
Sbjct: 58 YIDYCMHRINLLRHYEIVPVVVFDGGNIPCKAVTHQERHRYKKEKNRELAMEKLKEGN 115
>gi|449439699|ref|XP_004137623.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
Length = 577
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 154 RKINVYGKIGSY-VKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSD 212
R +N+ I + +K+ +E P+ A + L S T + G VITEDSD
Sbjct: 124 RAVNITPSIANQLIKLLREHDIEFVVAPYEADAQLAYLSSLGT---LNGGIAAVITEDSD 180
Query: 213 LLVFGAKKIIYKLDLSGNCCFMDREKL-PSALKMPLAK-FTDAKFRYMCILSGCDYWTGI 270
++ +G K I+K+D GN M +K+ SA P K F MC+L+GCD+ +
Sbjct: 181 MIAYGCKATIFKMDRYGNGEEMMLDKIFDSAGCTPSFKDFDKELLTGMCVLAGCDFLPSV 240
Query: 271 KGMGLKKA 278
G+G+ +A
Sbjct: 241 PGIGIARA 248
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y++YCM IN+L ++I ++VFDG ++P K T ++R ++ E ++++ A E L G+
Sbjct: 58 YIDYCMHRINLLRHYEIVPVVVFDGGNIPCKAVTHQERHRKKE-KNRELAMEKLKEGN 114
>gi|323447867|gb|EGB03774.1| hypothetical protein AURANDRAFT_67724 [Aureococcus anophagefferens]
Length = 200
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR---RKRAEIRHKQKAAELLHSG 77
++ +CM + +LL +K+K ++VFDG LPAK A E R R+ A+ QKA E
Sbjct: 55 HIEFCMGRVALLLHYKVKPLLVFDGGALPAKAAQEASRRGKREHAKAMASQKAREDSQEE 114
Query: 78 SSIIYKLDLSGNCCFMDREKL---------PSALKMPLAKFTDAKFRYMCILSGCDY 125
+ Y C +++ P + + +T F MC L+GCDY
Sbjct: 115 ARKWY-----AKCSTPSAQQVVLADLFAAGPDVSAIDVRSWTQHMFVTMCALAGCDY 166
>gi|323447590|gb|EGB03505.1| hypothetical protein AURANDRAFT_67936 [Aureococcus anophagefferens]
Length = 193
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR---RKRAEIRHKQKAAELLHSG 77
++ +CM + +LL +K+K ++VFDG LPAK A E R R+ A+ QKA E
Sbjct: 55 HIEFCMGRVALLLHYKVKPLLVFDGGALPAKAAQEASRRGKREHAKAMASQKAREDSQEE 114
Query: 78 SSIIYKLDLSGNCCFMDREKL---------PSALKMPLAKFTDAKFRYMCILSGCDY 125
+ Y C +++ P + + +T F MC L+GCDY
Sbjct: 115 ARKWY-----AKCSTPSAQQVVLADLFAAGPDVSAIDVRSWTQHMFVTMCALAGCDY 166
>gi|325189982|emb|CCA24465.1| exonuclease 1 putative [Albugo laibachii Nc14]
Length = 542
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VI+EDSD + +G + I++K G +++ L + + K+T+ F C L G
Sbjct: 115 DAVISEDSDCIAYGCRTILFKWSGDGWASELNKRSLGANEDLCFVKWTEEMFVVFCALCG 174
Query: 264 CDYWTGIKGMGLKKAKDYVFS-IMDPDF 290
CDY + G+G A YV + I PD
Sbjct: 175 CDYCPSLPGIGPITAYKYVNTFITAPDI 202
>gi|429329192|gb|AFZ80951.1| XPG I domain-containing protein [Babesia equi]
Length = 582
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNC-----CFMDREKLPSALKMPLAKFTDAK 254
+G A I+EDSDLL +G ++ YKLD G F +K+ + K L +
Sbjct: 83 SGIASCAISEDSDLLAYGCPRVWYKLDKDGKAFEITLPFQSTDKIVN--KGFLKGLSHKM 140
Query: 255 FRYMCILSGCDYWTG--IKGMGLKKAKDYVF 283
F MC+LSG DY G I+GMG+K A V
Sbjct: 141 FIIMCVLSGTDYDDGNHIRGMGIKIAHKLVM 171
>gi|254583167|ref|XP_002499315.1| ZYRO0E08932p [Zygosaccharomyces rouxii]
gi|238942889|emb|CAR31060.1| ZYRO0E08932p [Zygosaccharomyces rouxii]
Length = 581
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 27/122 (22%)
Query: 193 AVTERNIAGYADYVITEDSDLLVFGAKKIIYK-------LDLSGNC-------------- 231
A +RN G+ DYV+T DSD LVFGA +++ L +GN
Sbjct: 171 AWLQRN--GHVDYVLTNDSDALVFGATRLLRNYSKFTNDLGATGNSPLGKQRSSSKDLFV 228
Query: 232 CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE 291
+D ++L SA ++ + +L G DY G+KGMG KA + DPDF
Sbjct: 229 TVVDLDQLNSATN---DRYNWWSLLFFSVLLGADYNQGVKGMGKVKAAKLA-QLQDPDFA 284
Query: 292 NR 293
R
Sbjct: 285 QR 286
>gi|396082436|gb|AFN84045.1| exonuclease 1 [Encephalitozoon romaleae SJ-2008]
Length = 366
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D ++TEDSDL+ +G+ +I+YK D F+ +E L + + + I
Sbjct: 162 GYIDCILTEDSDLIPYGSNRILYKFD----NTFV-QEFTRGCLSEARGRDFEENILDISI 216
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFP 304
LSGCDY I+G+G+ A + + E EY+++ K P
Sbjct: 217 LSGCDYLASIQGVGVVTAHKLLSK--EKTVEKVVEYLQHRKAIP 258
>gi|383622569|ref|ZP_09948975.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
gi|448694526|ref|ZP_21697026.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
gi|445785111|gb|EMA35906.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
Length = 325
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 52/135 (38%), Gaps = 43/135 (31%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGNPELMDLEATLEEHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA-------------------------------------KDYVF 283
L G D+ G+ G+G K A DY F
Sbjct: 220 LIGTDFNEGVSGIGPKTAITEITEHGDLWSVLEARGDTVEYGDRVRQLFRDPNVTDDYEF 279
Query: 284 -SIMDPDFENRKEYV 297
+ +DPD E +EYV
Sbjct: 280 ETTLDPDLEAAREYV 294
>gi|313242146|emb|CBY34317.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 24 YCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
+C+K + +L H I I VFDG LP+K+AT + RR R E ++Q+A L +G S
Sbjct: 61 FCLKRLELLEKHNITPICVFDGEKLPSKKATNDQRRARRE-ENRQRAITALKNGES 115
>gi|448299433|ref|ZP_21489445.1| flap endonuclease-1 [Natronorubrum tibetense GA33]
gi|445588023|gb|ELY42272.1| flap endonuclease-1 [Natronorubrum tibetense GA33]
Length = 325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 43/135 (31%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + + +L G+ MD E ++ L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPRTLRQLTSKGDPELMDLEATLDHHELTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA-------------------------------------KDYVF 283
L G D+ G+ G+G K A DY F
Sbjct: 220 LIGTDFNEGVSGIGPKTAIKAITEHGDLWSVLEARGAHIEYGDRVRKLFRDPNVTDDYEF 279
Query: 284 -SIMDPDFENRKEYV 297
+ +DPD E KEYV
Sbjct: 280 ETTLDPDLEAAKEYV 294
>gi|448305063|ref|ZP_21494997.1| flap endonuclease-1 [Natronorubrum sulfidifaciens JCM 14089]
gi|445589598|gb|ELY43826.1| flap endonuclease-1 [Natronorubrum sulfidifaciens JCM 14089]
Length = 325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGNPELMDLEATLEHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNNGVHGIGPKTA 237
>gi|406699511|gb|EKD02713.1| exonuclease [Trichosporon asahii var. asahii CBS 8904]
Length = 323
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 84 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI------------LSGCDYWTGIKG 131
+D GNC ++ R + + +P+ +TD +FR M + LSGCDY I G
Sbjct: 1 MDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYLPSIVG 60
Query: 132 MGLKKA 137
+GLKKA
Sbjct: 61 IGLKKA 66
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 225 LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI------------LSGCDYWTGIKG 272
+D GNC ++ R + + +P+ +TD +FR M + LSGCDY I G
Sbjct: 1 MDKDGNCVYVKRTNIATVRDLPMHGWTDTQFRRMAVSSIVRMQANQQMLSGCDYLPSIVG 60
Query: 273 MGLKKA 278
+GLKKA
Sbjct: 61 IGLKKA 66
>gi|403224257|dbj|BAM42387.1| uncharacterized protein TOT_040000754 [Theileria orientalis strain
Shintoku]
Length = 1042
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 50/126 (39%), Gaps = 47/126 (37%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSG-----NCCFMDREKLPSALKMPLAKFT--- 251
+G AD I+EDSDL+V+G KIIYKLD G N F + P K KF
Sbjct: 497 SGIADIAISEDSDLVVYGCPKIIYKLDKEGKGVELNVPFNAFKAAPGPKKRKEVKFEKPE 556
Query: 252 ----------------------------DAK---------FRYMCILSGCDYWTG--IKG 272
DA+ F MC+LSG DY G I G
Sbjct: 557 ERSGEESMDLDSKDEEEKHTNKSDYAEKDARIFKGLNHRMFVVMCVLSGTDYDDGYHING 616
Query: 273 MGLKKA 278
MGLK A
Sbjct: 617 MGLKVA 622
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 12 NLKKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAA 71
N++ + ++ + + +++LL++ I IMVFDG +PAK+A RR+R E + K++A
Sbjct: 379 NVRGEMSDKFLKFIISMLSLLLSYNITPIMVFDGYEMPAKKAENMMRRERRE-KAKKEAL 437
Query: 72 ELL 74
E++
Sbjct: 438 EMI 440
>gi|448414274|ref|ZP_21577413.1| flap endonuclease-1 [Halosarcina pallida JCM 14848]
gi|445682567|gb|ELZ34984.1| flap endonuclease-1 [Halosarcina pallida JCM 14848]
Length = 326
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG + S + +R G ADYV +ED D L+FGA + +L G+ MD E S+L++
Sbjct: 154 EGEAQASHMAKR---GDADYVGSEDYDTLLFGAPYTLRQLTSKGDPELMDLEATLSSLEV 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ D + +L G D+ G+ G+G K A
Sbjct: 211 THEQLID-----IAVLCGTDFNDGVSGVGPKTA 238
>gi|448397895|ref|ZP_21569833.1| flap endonuclease-1 [Haloterrigena limicola JCM 13563]
gi|445672111|gb|ELZ24688.1| flap endonuclease-1 [Haloterrigena limicola JCM 13563]
Length = 325
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + + +L G+ MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPRTLRQLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|298706804|emb|CBJ29727.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 476
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGN---CCFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
TED D L F K++ ++ SG+ +D +KL L++ KF D +C+L
Sbjct: 179 TATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVD-----LCVLC 233
Query: 263 GCDYWTGIKGMGLKKA 278
GCDY IKG+G KKA
Sbjct: 234 GCDYTGSIKGIGPKKA 249
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 93 MDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
+D +KL L++ KF D +C+L GCDY IKG+G KKA
Sbjct: 210 VDYQKLLQGLELSHEKFVD-----LCVLCGCDYTGSIKGIGPKKA 249
>gi|348670262|gb|EGZ10084.1| hypothetical protein PHYSODRAFT_523066 [Phytophthora sojae]
Length = 2851
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D VI++DSD + +G K +++KL G + R L + ++ +T+ +CIL+G
Sbjct: 2244 DVVISDDSDCVPYGVKTVLFKLSPDGWGSELKRRSLGANEELSFVGWTE---EMLCILAG 2300
Query: 264 CDYWTGIKGMGLKKAKDYVFSIMDP 288
CDY + G+G+ A V P
Sbjct: 2301 CDYCPSVSGVGIINAYKLVSQFKTP 2325
Score = 43.9 bits (102), Expect = 0.17, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELL 74
Y+N+ ++ I +L H I I+VFDG LPAK A E R R+ K KA +LL
Sbjct: 2130 YLNFSIQQIKLLQEHDITPILVFDGAPLPAK-ARENAARSRSRAEWKLKAEKLL 2182
>gi|326431006|gb|EGD76576.1| hypothetical protein PTSG_07693 [Salpingoeca sp. ATCC 50818]
Length = 838
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL------PSALKMPLAKFTDAK 254
G D VITEDSDL+ FGA ++ K+D +G + +L + T +
Sbjct: 163 GLVDAVITEDSDLIAFGAADVLLKMDSNGRGLRLRFHRLNEISIRDGKRTLSFKNMTLEQ 222
Query: 255 FRYMCILSGCDY------WTGIKGMGLKKAKDYVF 283
+ C+LSG DY W IKG+ LK A YV
Sbjct: 223 LQLCCVLSGSDYLPKHSKWH-IKGISLKTACKYVL 256
>gi|294918871|ref|XP_002778492.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239886936|gb|EER10287.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 674
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 31/109 (28%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMD------------------------ 235
AG D VI+EDSD+L +G K +I KLD +G+C +D
Sbjct: 169 AGLVDAVISEDSDVLPYGCKVMIAKLDQAGDCQVVDISWALKGGSKLKEKSNEQEDQRLS 228
Query: 236 ----REKLPSALKMPLAKFTDAKFRYMCILSGCDY--WTGIKGMGLKKA 278
R+K + L L +T F C+L+GCDY + GMG+K A
Sbjct: 229 FRELRDKYGADL-ANLRDWTKEVFIDACVLAGCDYSHACNLSGMGIKTA 276
>gi|448309987|ref|ZP_21499840.1| flap endonuclease-1 [Natronorubrum bangense JCM 10635]
gi|445589008|gb|ELY43247.1| flap endonuclease-1 [Natronorubrum bangense JCM 10635]
Length = 325
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGNPELMDLEATLEHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNDGVHGIGPKTA 237
>gi|448321569|ref|ZP_21511045.1| flap endonuclease-1 [Natronococcus amylolyticus DSM 10524]
gi|445603121|gb|ELY57089.1| flap endonuclease-1 [Natronococcus amylolyticus DSM 10524]
Length = 325
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG + + V +R G ADYV +ED D L+FGA + +L G+ MD E +
Sbjct: 153 EGEAQAAHVVKR---GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMDLEATLERHDL 209
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
L + DA IL G D+ G+ G+G K A
Sbjct: 210 TLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|221509067|gb|EEE34636.1| exonuclease, putative [Toxoplasma gondii VEG]
Length = 952
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 26/103 (25%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP------------------- 246
++EDSDLL G +++++K+D GNC +R LP +
Sbjct: 185 AVSEDSDLLAHGCQQVLFKMDREGNC---ERLSLPLNDRASPDAAQASVSASSAKKLGQL 241
Query: 247 --LAKFTDAKFRYMCILSGCDYW--TGIKGMGLKKAKDYVFSI 285
L F F MC+L GCDY I G+G+ A +V +
Sbjct: 242 ECLRDFDQTMFTAMCVLGGCDYTHDVHINGLGISTACRFVHKL 284
>gi|237837741|ref|XP_002368168.1| exonuclease, putative [Toxoplasma gondii ME49]
gi|211965832|gb|EEB01028.1| exonuclease, putative [Toxoplasma gondii ME49]
Length = 951
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 26/103 (25%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP------------------- 246
++EDSDLL G +++++K+D GNC +R LP +
Sbjct: 185 AVSEDSDLLAHGCQQVLFKMDREGNC---ERLSLPLNDRASPDAAQASVSASSAKKLGQL 241
Query: 247 --LAKFTDAKFRYMCILSGCDYW--TGIKGMGLKKAKDYVFSI 285
L F F MC+L GCDY I G+G+ A +V +
Sbjct: 242 ECLRDFDQTMFTAMCVLGGCDYTHDVHINGLGISTACRFVHKL 284
>gi|435846409|ref|YP_007308659.1| flap endonuclease 1 [Natronococcus occultus SP4]
gi|433672677|gb|AGB36869.1| flap endonuclease 1 [Natronococcus occultus SP4]
Length = 325
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG + + + +R G ADYV +ED D L+FGA + +L G+ MD E ++
Sbjct: 153 EGEAQAAHIVKR---GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMDLEATLERHEL 209
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
L + DA IL G D+ G+ G+G K A
Sbjct: 210 TLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|221485037|gb|EEE23327.1| flap endonuclease-1, putative [Toxoplasma gondii GT1]
Length = 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 27/124 (21%)
Query: 206 VITEDSDLLVFGAKKIIYKLDL----SGNCCFMDRE-----KLPSALKMPLAKFTDAKFR 256
TED+D L FGA ++I L SG+ LP+ L+ +F+ +F
Sbjct: 177 TATEDADALTFGATRLIRNLTFGERSSGSGASATASGILVIDLPTLLEE--LQFSQEQFI 234
Query: 257 YMCILSGCDYWTGIKGMGLKKA----KDY-----VFSIMDPD-------FENRKEYVKYA 300
CIL GCDY +KG+G K A K++ + ++DP+ F+ +E+ ++
Sbjct: 235 DFCILCGCDYCGTLKGVGAKTAYSLVKEHGSIEKILEVVDPEKVPDGFCFQEAREFFRHP 294
Query: 301 KVFP 304
+V P
Sbjct: 295 EVTP 298
>gi|281202270|gb|EFA76475.1| 5'3'-exonuclease N- and I-domain-containing protein
[Polysphondylium pallidum PN500]
Length = 188
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
++NYC+ INML +K+ ++VFDG LP K+ TE++RR + E A L+ ++
Sbjct: 55 FINYCISLINMLKQNKVIPVIVFDGGALPNKKVTEDERRGKREHMKAMAHAYLMEGNAA- 113
Query: 81 IYKLDLSGNCCF 92
N CF
Sbjct: 114 ------EANRCF 119
>gi|237836211|ref|XP_002367403.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|211965067|gb|EEB00263.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|221505908|gb|EEE31543.1| flap endonuclease-1, putative [Toxoplasma gondii VEG]
Length = 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 27/124 (21%)
Query: 206 VITEDSDLLVFGAKKIIYKLDL----SGNCCFMDRE-----KLPSALKMPLAKFTDAKFR 256
TED+D L FGA ++I L SG+ LP+ L+ +F+ +F
Sbjct: 177 TATEDADALTFGATRLIRNLTFGERASGSGASATASGILVIDLPTLLEE--LQFSQEQFI 234
Query: 257 YMCILSGCDYWTGIKGMGLKKA----KDY-----VFSIMDPD-------FENRKEYVKYA 300
CIL GCDY +KG+G K A K++ + ++DP+ F+ +E+ ++
Sbjct: 235 DFCILCGCDYCGTLKGVGAKTAYSLVKEHGSIEKILEVVDPEKVPDGFCFQEAREFFRHP 294
Query: 301 KVFP 304
+V P
Sbjct: 295 EVTP 298
>gi|391346970|ref|XP_003747738.1| PREDICTED: transmembrane protein 35-like [Metaseiulus occidentalis]
Length = 198
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 287 DPDFENRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIP 337
D E R+ ++ Y+KVFP +L+MKV K +R +IG EV CG ++ IP
Sbjct: 33 DMHREIRRNFLSYSKVFPTNVLLNMKVSPKIFRLVIGWTEVCCGTTLLLIP 83
>gi|336255103|ref|YP_004598210.1| Flap structure-specific endonuclease [Halopiger xanaduensis SH-6]
gi|335339092|gb|AEH38331.1| Flap structure-specific endonuclease [Halopiger xanaduensis SH-6]
Length = 325
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG + + + R G ADYV +ED D L+FGA + +L G+ MD E + +
Sbjct: 153 EGEAQAAHIVRR---GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMDLEATLAHHDL 209
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
L + DA IL G D+ G+ G+G K A
Sbjct: 210 TLEQLIDA-----AILIGTDFNEGVSGIGPKTA 237
>gi|412985227|emb|CCO20252.1| predicted protein [Bathycoccus prasinos]
Length = 728
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
YVNYC+ ML ++ ++VFDG LPAK + E RR+R E KQK E L G+
Sbjct: 124 YVNYCIHRAKMLKFFGVEPVIVFDGDRLPAKASEEGTRRQRRE-EAKQKGRERLEQGN 180
>gi|429190737|ref|YP_007176415.1| flap structure-specific endonuclease [Natronobacterium gregoryi
SP2]
gi|448327264|ref|ZP_21516597.1| flap endonuclease-1 [Natronobacterium gregoryi SP2]
gi|429134955|gb|AFZ71966.1| flap structure-specific endonuclease [Natronobacterium gregoryi
SP2]
gi|445608848|gb|ELY62671.1| flap endonuclease-1 [Natronobacterium gregoryi SP2]
Length = 325
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 43/135 (31%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDLELMDLEATLEHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA-------------------------------------KDYVF 283
L G D+ G+ G+G K A DY F
Sbjct: 220 LIGTDFNEGVSGIGPKTAIAEITEHGDLWSVLEARGDSVEYGDRVRQLFRDPNVTDDYEF 279
Query: 284 -SIMDPDFENRKEYV 297
+ +DPD E +EYV
Sbjct: 280 DTTLDPDLEAAREYV 294
>gi|448344743|ref|ZP_21533645.1| flap endonuclease-1 [Natrinema altunense JCM 12890]
gi|445636849|gb|ELY90006.1| flap endonuclease-1 [Natrinema altunense JCM 12890]
Length = 325
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD E + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMDLEATLAQHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
L G D+ G+ G+G K A + D E R ++V++
Sbjct: 220 LIGTDFNEGVSGIGPKTAISAITEHGDLWSALEARGDHVEHGD 262
>gi|432911452|ref|XP_004078686.1| PREDICTED: probable flap endonuclease 1 homolog [Oryzias latipes]
Length = 343
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYM 258
G A V +ED D L FGA +I +L+ + ++ KL AL++ L + D +
Sbjct: 139 GRAHAVASEDMDTLPFGANVLIRQLNAKKDSEIVEYSLPKLLEALRISLEELVD-----L 193
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CIL GCDY I G+G K+A
Sbjct: 194 CILLGCDYCDKIPGLGPKRA 213
>gi|387595247|gb|EIJ92872.1| flap endonuclease 1-B [Nematocida parisii ERTm1]
Length = 342
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKII---YKLDLSGNCCFMDREKL 239
A NE +A+ NI G + V++ED D L FG K ++ + + M+
Sbjct: 152 APNEAEGFCAAL---NICGAVNGVVSEDMDSLAFGGKILLRNFFPALMKKKLSVME---- 204
Query: 240 PSALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+L+M L + ++F MCIL GCDY +KGMG KK D V
Sbjct: 205 -ISLEMVLKQTGLDQSEFIDMCILLGCDYCQKLKGMGPKKVYDLV 248
>gi|221488566|gb|EEE26780.1| exonuclease, putative [Toxoplasma gondii GT1]
Length = 955
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 26/103 (25%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP-SALKMP------------------ 246
++EDSDLL G +++++K+D GNC +R LP + P
Sbjct: 185 AVSEDSDLLAHGCQQVLFKMDREGNC---ERLSLPLNDRPSPDAAQASVSASSAKKLGQL 241
Query: 247 --LAKFTDAKFRYMCILSGCDYWTG--IKGMGLKKAKDYVFSI 285
L F F MC+L GCDY I G+G+ A +V +
Sbjct: 242 ECLRDFDQTMFTAMCVLGGCDYTHDVHINGLGISTACRFVHKL 284
>gi|387592620|gb|EIJ87644.1| flap endonuclease 1-B [Nematocida parisii ERTm3]
Length = 371
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS- 241
A NE +A+ NI G + V++ED D L FG K ++ + + ++KL
Sbjct: 152 APNEAEGFCAAL---NICGAVNGVVSEDMDSLAFGGKILLRNFFPA-----LMKKKLSVM 203
Query: 242 --ALKMPLAK--FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+L+M L + ++F MCIL GCDY +KGMG KK D V
Sbjct: 204 EISLEMVLKQTGLDQSEFIDMCILLGCDYCQKLKGMGPKKVYDLV 248
>gi|289582877|ref|YP_003481343.1| flap structure-specific endonuclease [Natrialba magadii ATCC 43099]
gi|448283660|ref|ZP_21474932.1| flap endonuclease-1 [Natrialba magadii ATCC 43099]
gi|289532430|gb|ADD06781.1| flap structure-specific endonuclease [Natrialba magadii ATCC 43099]
gi|445573260|gb|ELY27783.1| flap endonuclease-1 [Natrialba magadii ATCC 43099]
Length = 325
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPYTLRQLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 220 LIGTDFNEGISGIGPKTA 237
>gi|429329613|gb|AFZ81372.1| DNA-repair protein xp-G, putative [Babesia equi]
Length = 839
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 192 SAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT 251
S N +G VIT+DSD LVFGA +++ S E+L S L + +
Sbjct: 554 SQCAHLNESGACYAVITDDSDALVFGANRVLKNFYNSNIFEVYTSERLFSQLGIGRQELA 613
Query: 252 DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYA 300
+ I+ GCDY TGIKG+G+ A + + + P F + E+ K+A
Sbjct: 614 -----LIAIICGCDYTTGIKGVGIINALEIIKAY--PTFNDLYEFRKWA 655
>gi|433637770|ref|YP_007283530.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
gi|433289574|gb|AGB15397.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
Length = 326
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + + +L G+ MD + + L + D + I
Sbjct: 166 GDADYVGSEDYDALLFGSPRTLRQLTSKGDPELMDLQATLDDHDLTLEQLID-----VAI 220
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
+ G D+ G+ G+G K A + D E+R ++V+Y
Sbjct: 221 MIGTDFNDGVDGIGPKTALSLIHEHGDLWSALESRGDHVEYGD 263
>gi|448310824|ref|ZP_21500603.1| flap endonuclease-1 [Natronolimnobius innermongolicus JCM 12255]
gi|445607172|gb|ELY61065.1| flap endonuclease-1 [Natronolimnobius innermongolicus JCM 12255]
Length = 325
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD E ++ L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMDLEATLERHELTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|45198756|ref|NP_985785.1| AFR238Wp [Ashbya gossypii ATCC 10895]
gi|44984766|gb|AAS53609.1| AFR238Wp [Ashbya gossypii ATCC 10895]
gi|374109016|gb|AEY97922.1| FAFR238Wp [Ashbya gossypii FDAG1]
Length = 698
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 31/117 (26%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 242
A EG + +A+ +AG DY++T DSD +FGA +I+ + LPS+
Sbjct: 154 AAGEGEAECAAL---QVAGSVDYILTNDSDAAIFGASRILRNFSKHA-------QDLPSS 203
Query: 243 LKMPLAK---------------------FTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
P+ K F+ F IL+G DY TG++ +G K+A
Sbjct: 204 GVSPVKKHVSEYFVTVVDIRAATEEHPTFSRKAFALFAILTGADYGTGLQHLGYKRA 260
>gi|123492232|ref|XP_001326017.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121908925|gb|EAY13794.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 388
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
+GY D V+TEDSDL+ + ++YKLD S + + + + LK+ T F +C
Sbjct: 161 SGYVDCVLTEDSDLIAYRTPLVLYKLDDSLQVTSIRYQDVLNFLKL-----TPDNFTSLC 215
Query: 260 ILSGCDYWTGIKG 272
I GCDY I
Sbjct: 216 IFGGCDYSPSITN 228
>gi|448634703|ref|ZP_21675101.1| flap endonuclease-1 [Haloarcula vallismortis ATCC 29715]
gi|445749676|gb|EMA01121.1| flap endonuclease-1 [Haloarcula vallismortis ATCC 29715]
Length = 326
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 242
A EG S + R G DYV TED D L+FGA + ++ G+ MD E S
Sbjct: 151 APAEGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFEATLSQ 207
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYA 300
+ + DA IL G D+ GI G+G K A + D E R E++ +A
Sbjct: 208 HDLTWEQLVDA-----AILMGTDFNEGISGIGPKTAVKELHEHGDLYAVLEARSEHIDHA 262
Query: 301 K 301
Sbjct: 263 D 263
>gi|363806970|ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|255640175|gb|ACU20378.1| unknown [Glycine max]
Length = 382
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 23/86 (26%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG V++ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 170 AGKVYGVVSEDMDSLTFGAPKFLRHL--------MD----PSSKKIPVMEFEVAKILEEL 217
Query: 255 ------FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY I+G+G
Sbjct: 218 NMTMDQFIDLCILSGCDYCDSIRGIG 243
>gi|448713770|ref|ZP_21702055.1| flap endonuclease-1 [Halobiforma nitratireducens JCM 10879]
gi|445789178|gb|EMA39869.1| flap endonuclease-1 [Halobiforma nitratireducens JCM 10879]
Length = 325
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMDLEATLEKHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNDGVSGIGPKTA 237
>gi|448318654|ref|ZP_21508168.1| flap endonuclease-1 [Natronococcus jeotgali DSM 18795]
gi|445598248|gb|ELY52311.1| flap endonuclease-1 [Natronococcus jeotgali DSM 18795]
Length = 325
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMDLEATLERHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|448355812|ref|ZP_21544561.1| flap endonuclease-1 [Natrialba hulunbeirensis JCM 10989]
gi|445634520|gb|ELY87699.1| flap endonuclease-1 [Natrialba hulunbeirensis JCM 10989]
Length = 325
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + +L G+ MD E + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPYTLRQLTSKGDPELMDLEATLAHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 220 LIGTDFNEGISGIGPKTA 237
>gi|238616353|ref|XP_002399029.1| hypothetical protein MPER_00225 [Moniliophthora perniciosa FA553]
gi|215477108|gb|EEB99959.1| hypothetical protein MPER_00225 [Moniliophthora perniciosa FA553]
Length = 99
Score = 48.1 bits (113), Expect = 0.009, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
YVNY M+ + +L H I+ +VFDG LPAK+ TE++R+++ E
Sbjct: 34 YVNYAMERVRLLRHHGIEPYIVFDGGPLPAKQGTEKERKQKRE 76
>gi|299470809|emb|CBN78632.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 387
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
Query: 200 AGYADYVITEDSDLLVFGAK-----KIIYKLDLSGNC--CFMDREKLPSALKMPLAKFTD 252
+G A VITEDSD+LV+ A ++YK+D G C D EKL S+L + KF
Sbjct: 201 SGLASAVITEDSDILVYMAAVKSTAPVLYKMDEFGTCKELGFDPEKL-SSLPGVIGKFGR 259
Query: 253 A-----------KFRYMCILSGCDYWTGIKGMGLKKA 278
F + L+GCDY I+G+GL A
Sbjct: 260 GLSIFSGEGGGRSFVQLAALAGCDYVDNIRGLGLLTA 296
>gi|363749773|ref|XP_003645104.1| hypothetical protein Ecym_2570 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888737|gb|AET38287.1| Hypothetical protein Ecym_2570 [Eremothecium cymbalariae
DBVPG#7215]
Length = 758
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 28/99 (28%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF----- 255
G DYV++ DSD LVFGA K++ R+ LPS+ PL K + F
Sbjct: 169 GVVDYVLSNDSDSLVFGATKVLKNFSKY-------RQDLPSSGTSPLRKRSSDFFVTVVD 221
Query: 256 ------RY----------MCILSGCDYWTGIKGMGLKKA 278
RY IL G DY TG++ +GLK+A
Sbjct: 222 IDETTRRYPTINRKAFMLFTILVGADYNTGLRHLGLKRA 260
>gi|323454359|gb|EGB10229.1| hypothetical protein AURANDRAFT_53007 [Aureococcus anophagefferens]
Length = 538
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKL-DLSGNCCFMDRE----KLPSALKM--PLAKFTDA 253
G D+V+TED D L FGA K++ L D+ G R L +AL+ P T A
Sbjct: 175 GACDFVVTEDMDALTFGAAKMVKNLFDVEGARAKEKRPAYEIDLAAALRELGPRGLGTMA 234
Query: 254 KFRYMCILSGCDYWTGIKGMG 274
F CIL GCDY + G+G
Sbjct: 235 AFVDFCILCGCDYLDHVPGVG 255
>gi|448327893|ref|ZP_21517213.1| flap endonuclease-1 [Natrinema versiforme JCM 10478]
gi|445617013|gb|ELY70619.1| flap endonuclease-1 [Natrinema versiforme JCM 10478]
Length = 325
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + +L G+ MD E + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPLTLRQLTSKGDPELMDLEATLAHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
L G D+ G+ G+G K A + D E R ++V+Y
Sbjct: 220 LIGTDFNEGVSGIGPKTAISAITEHGDLWSVLEARGDHVEYGD 262
>gi|448374758|ref|ZP_21558548.1| flap endonuclease-1 [Halovivax asiaticus JCM 14624]
gi|445659884|gb|ELZ12686.1| flap endonuclease-1 [Halovivax asiaticus JCM 14624]
Length = 326
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + + +L G+ MD + + L + D + I
Sbjct: 166 GDADYVGSEDYDALLFGSPRTLRQLTSKGDPELMDLQATLDDHDLTLEQLID-----VAI 220
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
+ G D+ G+ G+G K A V D E R ++V+Y
Sbjct: 221 MIGTDFNHGVDGVGPKTALSLVHEHGDLWSALEARGDHVEYGD 263
>gi|294913998|ref|XP_002778227.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239886400|gb|EER10022.1| exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 218
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 31/109 (28%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMD------------------------ 235
AG D VI+EDSD+L +G K +I KLD +G+C +D
Sbjct: 28 AGLVDAVISEDSDVLPYGCKVMIAKLDQAGDCQVVDISWALKGGSKLKEKSNEQEDQRLS 87
Query: 236 ----REKLPSALKMPLAKFTDAKFRYMCILSGCDY--WTGIKGMGLKKA 278
R K + L L +T F C+L+GCDY + GMG+K A
Sbjct: 88 FRELRNKYGADL-ANLRDWTKEMFIDACVLAGCDYSHACNLSGMGIKTA 135
>gi|219120899|ref|XP_002185681.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582530|gb|ACI65151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 894
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 201 GYADYVITEDSDLLVFGAKK-IIYKL------DLSGNCCFMDREKLPSALKMPLAKFTDA 253
GY D + TEDSDL+ +G K I+YKL + + RE L + ++ L FT
Sbjct: 614 GYIDLIATEDSDLVAYGVKSPILYKLVNSLGDEAVPRGVLVRREDLGATTEINLCDFTAT 673
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKA 278
+ + +G DY +KG+G+K A
Sbjct: 674 MLAVLFVAAGSDYCKKLKGIGVKAA 698
>gi|195431204|ref|XP_002063637.1| GK21315 [Drosophila willistoni]
gi|317374897|sp|B4MR84.1|FEN1_DROWI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194159722|gb|EDW74623.1| GK21315 [Drosophila willistoni]
Length = 388
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +FT
Sbjct: 169 AGKVYATATEDMDALTFGSSKLLRYLTYS------------EARKMPVKEFTYEKLLQGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+F +CIL GCDY IKG+G K+A + + S D
Sbjct: 217 ELNQREFIDLCILLGCDYCESIKGIGPKRAIELINSYRD 255
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 100 SALKMPLAKFT-----------DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 146
A KMP+ +FT +F +CIL GCDY IKG+G K+A + + S D
Sbjct: 198 EARKMPVKEFTYEKLLQGLELNQREFIDLCILLGCDYCESIKGIGPKRAIELINSYRD 255
>gi|448337894|ref|ZP_21526967.1| flap endonuclease-1 [Natrinema pallidum DSM 3751]
gi|445624854|gb|ELY78227.1| flap endonuclease-1 [Natrinema pallidum DSM 3751]
Length = 325
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + +L G+ MD E + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPLTLRQLTSKGDPELMDLEATLAQHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
L G D+ G+ G+G K A + D E R ++V++
Sbjct: 220 LIGTDFNEGVSGIGPKTAISAITEHGDLWSALEARGDHVEHGD 262
>gi|388498254|gb|AFK37193.1| unknown [Lotus japonicus]
Length = 366
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 154 AGMVYAVASEDMDSLTFGAPKFLRHL--------MD----PSSKKVPVMEFEVAKILEEL 201
Query: 255 ------FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G + A
Sbjct: 202 NLTMDQFIDLCILSGCDYCDNIRGIGGQTA 231
>gi|448358107|ref|ZP_21546792.1| flap endonuclease-1 [Natrialba chahannaoensis JCM 10990]
gi|445646678|gb|ELY99662.1| flap endonuclease-1 [Natrialba chahannaoensis JCM 10990]
Length = 325
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + +L G+ MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPYTLRQLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 220 LIGTDFNEGISGIGPKTA 237
>gi|317374903|sp|D3TQJ5.1|FEN1_GLOMM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|289742451|gb|ADD19973.1| 5'-3' exonuclease [Glossina morsitans morsitans]
Length = 382
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG TED D L FG+ ++ L S A KMP+ +F+ AK
Sbjct: 169 AGKVYATATEDMDALTFGSGILLRHLTFS------------EARKMPVKEFSYAKVLDGF 216
Query: 255 ------FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
F +CIL GCDY GI+G+G K+A + + S D
Sbjct: 217 GLTSQEFIDLCILLGCDYCDGIRGIGPKRATELMNSYKD 255
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 13/69 (18%)
Query: 100 SALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 148
A KMP+ +F+ AK F +CIL GCDY GI+G+G K+A + + S D
Sbjct: 198 EARKMPVKEFSYAKVLDGFGLTSQEFIDLCILLGCDYCDGIRGIGPKRATELMNSYK--D 255
Query: 149 FENALRKIN 157
E L KI+
Sbjct: 256 IETILEKID 264
>gi|448667547|ref|ZP_21686047.1| flap endonuclease-1 [Haloarcula amylolytica JCM 13557]
gi|445770115|gb|EMA21183.1| flap endonuclease-1 [Haloarcula amylolytica JCM 13557]
Length = 326
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG S + R G DYV TED D L+FGA + ++ G+ MD E +
Sbjct: 154 EGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFEATLEQHDL 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
+ DA IL G D+ GI G+G K A + D E R E++ +A
Sbjct: 211 TWEQLVDA-----AILMGTDFNEGISGIGPKTAVTELHEHGDLYAVLEARDEHIDHAD 263
>gi|310831026|ref|YP_003969669.1| putative DNA endonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386210|gb|ADO67070.1| putative DNA endonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 321
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 169 TKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLS 228
+KE L A E L + + E+NI DYV+TED D+L FG KII +
Sbjct: 136 SKELLDLMGIPYLQADGEADILCAKLCEKNIV---DYVLTEDIDILTFGGTKIIKSIFKE 192
Query: 229 GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDY----WTGIKGMGLKKAKDYVFS 284
G+ +D+ + + +F CI+ GCDY + K L+ K Y F
Sbjct: 193 GDIKIIDKLTILKKYDITYKQFI-----IFCIILGCDYHHINFKCNKNQALELCKKYRFG 247
Query: 285 IMDPDFENRKEYVKYAKVF-----------PLTAILDMKVPAK 316
+ + EN+K V + LT + +K+P++
Sbjct: 248 -NNLEHENKKLNVDLVNLIFNYFYKNDNYDNLTCTIKLKLPSE 289
>gi|429964483|gb|ELA46481.1| hypothetical protein VCUG_02025 [Vavraia culicis 'floridensis']
Length = 414
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
Y ++TEDSDL+V+ I+YK N M E+ ++ F +CI
Sbjct: 162 NYIHSIMTEDSDLIVYNCNNILYKY---ANNHVMHYER---SVFREKNDFLCDNLLDVCI 215
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY +KG+G+ A
Sbjct: 216 LSGCDYLENVKGVGINSA 233
>gi|357441987|ref|XP_003591271.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480319|gb|AES61522.1| Flap endonuclease 1a [Medicago truncatula]
Length = 369
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 23/86 (26%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 155 AGKVYAVASEDMDSLTFGAPKFLRHL--------MD----PSSKKIPVMEFDVAKILEEL 202
Query: 255 ------FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY I+G+G
Sbjct: 203 DLTMDQFIDLCILSGCDYCDNIRGIG 228
>gi|221055149|ref|XP_002258713.1| endonuclease [Plasmodium knowlesi strain H]
gi|193808783|emb|CAQ39485.1| endonuclease, putative [Plasmodium knowlesi strain H]
Length = 415
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D V+++D+D L FGA +I + +++++L + L + +F D CILSG
Sbjct: 286 DIVVSDDTDALAFGAPNLIRFIMNKKKRHIINKDELLNELNISYEQFID-----FCILSG 340
Query: 264 CDYWTGIKGMGLKKAKDYV 282
CDY I G+G KA + +
Sbjct: 341 CDYSAKIPGIGPVKAHNII 359
>gi|110668340|ref|YP_658151.1| flap endonuclease-1 [Haloquadratum walsbyi DSM 16790]
gi|121684788|sp|Q18HK0.1|FEN_HALWD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|109626087|emb|CAJ52538.1| flap endonuclease Fen1 [Haloquadratum walsbyi DSM 16790]
Length = 326
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
E I G DYV +ED D L+FGA + +L G+ MD L + LK T +
Sbjct: 161 EMAIRGDVDYVGSEDYDTLLFGAPYTVRQLTSKGDPELMD---LQTTLKN--QNLTREQL 215
Query: 256 RYMCILSGCDYWTGIKGMGLKKA----KDY--VFSIMDPDFENRKEYVKYAK 301
+ IL G D+ GI G+G A D+ ++S++D R E++++A
Sbjct: 216 VDVAILCGTDFNDGISGIGPATAISAINDHGDLWSVLDA----RDEFIQHAD 263
>gi|385803787|ref|YP_005840187.1| flap endonuclease Fen1 [Haloquadratum walsbyi C23]
gi|339729279|emb|CCC40515.1| flap endonuclease Fen1 [Haloquadratum walsbyi C23]
Length = 326
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
E I G DYV +ED D L+FGA + +L G+ MD L + LK T +
Sbjct: 161 EMAIRGDVDYVGSEDYDTLLFGAPYTVRQLTSKGDPELMD---LQTTLKN--QNLTREQL 215
Query: 256 RYMCILSGCDYWTGIKGMGLKKA----KDY--VFSIMDPDFENRKEYVKYAK 301
+ IL G D+ GI G+G A D+ ++S++D R E++++A
Sbjct: 216 VDVAILCGTDFNDGISGIGPATAISAINDHGDLWSVLDA----RDEFIQHAD 263
>gi|324514356|gb|ADY45841.1| Flap endonuclease 1-B [Ascaris suum]
Length = 320
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCF----MDREKLPSALKMPLAKFTDAKF 255
AG TED D L FG+K+++ +L S ++ E++ +M + +F D
Sbjct: 105 AGKVFAAATEDMDALAFGSKRLLRQLTASEAKKLPVKEINLEQVLKDFEMDMPQFVD--- 161
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY I+G+G KKA
Sbjct: 162 --LCILLGCDYTKTIRGIGPKKA 182
>gi|156094601|ref|XP_001613337.1| flap exonuclease [Plasmodium vivax Sal-1]
gi|317376189|sp|A5KAL1.1|FEN1_PLAVS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148802211|gb|EDL43610.1| flap exonuclease, putative [Plasmodium vivax]
Length = 623
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS----------------ALKMP 246
A TED+D LVFG K +I L+ + + ++ K S L +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLS 233
Query: 247 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ +F D CIL GCDY IKG+G K A
Sbjct: 234 MNEFID-----FCILCGCDYCDTIKGIGSKTA 260
>gi|357441985|ref|XP_003591270.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480318|gb|AES61521.1| Flap endonuclease 1a [Medicago truncatula]
Length = 384
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 23/86 (26%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 170 AGKVYAVASEDMDSLTFGAPKFLRHL--------MD----PSSKKIPVMEFDVAKILEEL 217
Query: 255 ------FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY I+G+G
Sbjct: 218 DLTMDQFIDLCILSGCDYCDNIRGIG 243
>gi|284164367|ref|YP_003402646.1| flap structure-specific endonuclease [Haloterrigena turkmenica DSM
5511]
gi|284014022|gb|ADB59973.1| flap structure-specific endonuclease [Haloterrigena turkmenica DSM
5511]
Length = 325
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + +L G+ MD E + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPLTLRQLTSKGDPELMDLEATLDHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|302843818|ref|XP_002953450.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300261209|gb|EFJ45423.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 397
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
AG + TED D L FGA ++I L ++ + + +++ A+ + D +F MC
Sbjct: 170 AGLVYGLATEDMDALTFGAPRVIRHL-MAPSSSNVPVQEIDRAVALQELGLDDDQFIDMC 228
Query: 260 ILSGCDYWTGIKGMGLKKA 278
IL GCDY I+G+G +A
Sbjct: 229 ILMGCDYCGTIRGIGAVRA 247
>gi|325186427|emb|CCA20932.1| flap endonuclease 1 putative [Albugo laibachii Nc14]
Length = 389
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDRE-KLPSALKMPLAKFTDAKFRYMCILSGCDY 266
TED D+L FG + ++ ++ N E KL ALK T+ +F +CIL GCDY
Sbjct: 182 TEDMDVLTFGTPVLYRRMTVAANKKVPILEIKLEQALKA--LDLTEQQFVDLCILCGCDY 239
Query: 267 WTGIKGMGLKKA 278
I+G+G KKA
Sbjct: 240 CDSIRGIGPKKA 251
>gi|148508143|gb|ABQ75935.1| flap structure-specific endonuclease [uncultured haloarchaeon]
Length = 337
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
E I G DYV +ED D L+FGA + +L G+ MD L + LK T +
Sbjct: 172 EMAIRGDVDYVGSEDYDTLLFGAPYTVRQLTSKGDPELMD---LQTTLKN--QNLTREQL 226
Query: 256 RYMCILSGCDYWTGIKGMGLKKA----KDY--VFSIMDPDFENRKEYVKYAK 301
+ IL G D+ GI G+G A D+ ++S++D R E++++A
Sbjct: 227 VDVAILCGTDFNDGISGIGPATAISAINDHGDLWSVLDA----RDEFIQHAD 274
>gi|403416579|emb|CCM03279.1| predicted protein [Fibroporia radiculosa]
Length = 663
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 164 SYVKITKEFLTS-GAP--QPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKK 220
+Y++ +KE L + G P +P G E +L SA+ + GYADYV +ED+D+LV+ A
Sbjct: 459 TYIE-SKEILAAMGVPCIEPTGP-YEAEALASALV---LNGYADYVASEDTDVLVYDAPL 513
Query: 221 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 280
I + +G + + + L++ A F D +L G D+ IK +G +A
Sbjct: 514 IRNIANRNGPLVVISGTDVRTVLQLDRASFVD-----FALLLGTDFSQRIKNIGPARALK 568
Query: 281 YV 282
++
Sbjct: 569 FI 570
>gi|429962587|gb|ELA42131.1| hypothetical protein VICG_00772 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 180 PF-GARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCF-MDRE 237
PF A +E + S + +R G V TED D L FGA ++ ++ S + +D
Sbjct: 150 PFVTAESESEAYCSLLCKR---GVVKAVATEDMDALCFGAPILLRNMNASQSKNLDIDEY 206
Query: 238 KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
L + LK + T F +CIL GCDY IKG+G K+A D +
Sbjct: 207 NLGTILKE--LELTMGSFIDLCILMGCDYCDTIKGVGHKRAYDLI 249
>gi|353243442|emb|CCA74982.1| related to RAD27-ssDNA endonuclease and 5`-3`exonuclease
[Piriformospora indica DSM 11827]
Length = 498
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG L SA+ +AG+ADYV +ED+D++V+GA + + + +D + + +AL M
Sbjct: 310 EGEGLASAIA---LAGHADYVASEDTDVIVYGAPLLRGLTNQAKPLVLIDSQDILTALTM 366
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMG----LKKAKDY 281
+F D +L G D+ + +G LK + Y
Sbjct: 367 TREEFID-----FALLIGTDFTQRLHKVGPVAALKHTRKY 401
>gi|335433586|ref|ZP_08558406.1| flap endonuclease-1 [Halorhabdus tiamatea SARL4B]
gi|334898592|gb|EGM36696.1| flap endonuclease-1 [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV TED D L+FGA + +L SG+ MD E + + + D + +
Sbjct: 166 GDADYVGTEDYDALLFGAPYTLRQLTSSGDPELMDFEATLAEHDLSWEQLVD-----VAL 220
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G++G G K A
Sbjct: 221 LCGTDFNEGVRGYGPKTA 238
>gi|344211083|ref|YP_004795403.1| flap endonuclease-1 [Haloarcula hispanica ATCC 33960]
gi|343782438|gb|AEM56415.1| flap endonuclease-1 [Haloarcula hispanica ATCC 33960]
Length = 326
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG S + R G DYV TED D L+FGA + ++ G+ MD E +
Sbjct: 154 EGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFEATLEQHDL 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
+ DA IL G D+ GI G+G K A + D E R E++ +A
Sbjct: 211 TWEQLVDA-----AILMGTDFNEGISGIGPKTAVTELHEHGDLYAVLEARDEHIDHAD 263
>gi|389582194|dbj|GAB64749.1| flap exonuclease [Plasmodium cynomolgi strain B]
Length = 624
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS----------------ALKMP 246
A TED+D LVFG K +I L+ + + ++ K S L +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLS 233
Query: 247 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ +F D CIL GCDY IKG+G K A
Sbjct: 234 MNEFID-----FCILCGCDYCDTIKGIGSKTA 260
>gi|149390675|gb|ABR25355.1| endonuclease putative [Oryza sativa Indica Group]
Length = 262
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 58 VASEDMDSLTFGAPRFLRHL--------MD----PSSKKIPVMEFEVAKVLEELELTMDQ 105
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G + A
Sbjct: 106 FIDLCILSGCDYCDSIKGIGGQTA 129
>gi|156096711|ref|XP_001614389.1| endonuclease [Plasmodium vivax Sal-1]
gi|148803263|gb|EDL44662.1| endonuclease, putative [Plasmodium vivax]
Length = 407
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D V+++D+D L FGA +I + +++++L + L + +F D CILSG
Sbjct: 278 DIVVSDDTDALAFGAPNLIRFIMNKKKRHIINKDELLNELNINYEQFID-----FCILSG 332
Query: 264 CDYWTGIKGMGLKKAKDYV 282
CDY I G+G KA + +
Sbjct: 333 CDYSAKIPGIGPVKAHEII 351
>gi|297812863|ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
gi|297320152|gb|EFH50574.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPKFLRHL--------MD----PSSRKIPVMEFEVAKILEELQLTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G + A
Sbjct: 224 FIDLCILSGCDYCDSIRGIGGQTA 247
>gi|42570539|ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
gi|332006193|gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 453
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPKFLRHL--------MD----PSSRKIPVMEFEVAKILEELQLTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G + A
Sbjct: 224 FIDLCILSGCDYCDSIRGIGGQTA 247
>gi|317374863|sp|B8AW67.1|FEN11_ORYSI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|218197185|gb|EEC79612.1| hypothetical protein OsI_20807 [Oryza sativa Indica Group]
Length = 380
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPRFLRHL--------MD----PSSKKIPVMEFEVAKVLEELELTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G + A
Sbjct: 224 FIDLCILSGCDYCDSIKGIGGQTA 247
>gi|115465159|ref|NP_001056179.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|62510701|sp|Q9SXQ6.1|FEN11_ORYSJ RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A; AltName:
Full=OsFEN-1a
gi|4587225|dbj|BAA36171.1| FEN-1 [Oryza sativa Japonica Group]
gi|113579730|dbj|BAF18093.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|222632398|gb|EEE64530.1| hypothetical protein OsJ_19381 [Oryza sativa Japonica Group]
Length = 380
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPRFLRHL--------MD----PSSKKIPVMEFEVAKVLEELELTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G + A
Sbjct: 224 FIDLCILSGCDYCDSIKGIGGQTA 247
>gi|55733906|gb|AAV59413.1| putative flap endonuclease 1 [Oryza sativa Japonica Group]
Length = 380
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 179 VASEDMDSLTFGAPRFLRHL--------MD----PSSKKIPVMEFEVAKVLEELELTMDQ 226
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G + A
Sbjct: 227 FIDLCILSGCDYCDSIKGIGGQTA 250
>gi|238481386|ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana]
gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|332006194|gb|AED93577.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 383
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPKFLRHL--------MD----PSSRKIPVMEFEVAKILEELQLTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G + A
Sbjct: 224 FIDLCILSGCDYCDSIRGIGGQTA 247
>gi|221052642|ref|XP_002261044.1| flap exonuclease [Plasmodium knowlesi strain H]
gi|317376188|sp|B3L014.1|FEN1_PLAKH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194247048|emb|CAQ38232.1| flap exonuclease, putative [Plasmodium knowlesi strain H]
Length = 595
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS----------------ALKMP 246
A TED+D LVFG K +I L+ + + ++ K S L +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANASSTSQNKNKNSSKRGYILTEINLEQVLKGLNLN 233
Query: 247 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ +F D CIL GCDY IKG+G K A
Sbjct: 234 MNEFID-----FCILCGCDYCDTIKGIGSKTA 260
>gi|68076257|ref|XP_680048.1| endonuclease [Plasmodium berghei strain ANKA]
gi|56500919|emb|CAI05790.1| endonuclease, putative [Plasmodium berghei]
Length = 390
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 144 IMDPDFENALRKINVYGKIGSYV--KITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAG 201
I+D D + L K N++ KI S I L P F +N+ + +
Sbjct: 204 IVDEDGTHDLFKKNIFIKINSQTANDIYNYLLLEKIP-IFITKNDAEKECAI----QCSH 258
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL 261
D V+++D+D L FGA +I + ++++++ + L + +F D CIL
Sbjct: 259 EKDIVVSDDTDALAFGAPNLIRFITNKKKRHIINKDEILNELNINYEQFID-----FCIL 313
Query: 262 SGCDYWTGIKGMGLKKA 278
SGCDY I G+G KA
Sbjct: 314 SGCDYSAKIPGIGPIKA 330
>gi|269859663|ref|XP_002649556.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
gi|317374899|sp|B7XHS8.1|FEN1_ENTBH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220067107|gb|EED44575.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
Length = 358
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE----KLPSALKMPLAKFTDAKF 255
+ + D V TED D L FG+ ++ + + + E K+ L+ + +F D
Sbjct: 168 SKFVDAVATEDMDSLCFGSPLLLRNFNTALSQKLPVEEYNLHKILEGLQFTMEQFVD--- 224
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G+K+A +Y+
Sbjct: 225 --LCILLGCDYSATIRGVGMKRAFEYI 249
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 108 KFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 141
+FT +F +CIL GCDY I+G+G+K+A +Y+
Sbjct: 216 QFTMEQFVDLCILLGCDYSATIRGVGMKRAFEYI 249
>gi|170045525|ref|XP_001850357.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167868531|gb|EDS31914.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 116
Score = 46.2 bits (108), Expect = 0.032, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 294 KEYVKYAKVFPLTAILDMKVPAKWYRRIIGS 324
+ YVKYAKVFP + + D K+P+KWYRR + +
Sbjct: 11 QNYVKYAKVFPCSTLFDFKLPSKWYRRSVAA 41
>gi|374628642|ref|ZP_09701027.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
gi|373906755|gb|EHQ34859.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
Length = 333
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLS------GNCCFMDREKLPSALKMPLAKFTDAK 254
G DY +++D D L+FGA+K++ L +S G ++ E + + + T +
Sbjct: 165 GIVDYSVSQDYDSLLFGAEKLVRNLTVSRKRKIRGRTITVNPETISLDEVLSGLEITREQ 224
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFEN 292
+ IL G D+ +GI+G+G KKA V D FEN
Sbjct: 225 LVEIGILIGTDFNSGIRGIGPKKALKIV---RDGTFEN 259
>gi|82704983|ref|XP_726779.1| structure-specific endonuclease [Plasmodium yoelii yoelii 17XNL]
gi|23482332|gb|EAA18344.1| structure-specific endonuclease of the XPG/RAD2 family [Plasmodium
yoelii yoelii]
Length = 390
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 138 KDYVFSIMDPDFENALRKINVYGKIGSYV--KITKEFLTSGAPQPFGARNEGRSLLSAVT 195
K+ V I+D D + L K N++ KI S I L P F +N+ +
Sbjct: 198 KEKVEIIVDEDGTHDLFKKNIFIKINSQTANDIYNYLLLEKIP-IFITKNDAEKECAI-- 254
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
+ D V+++D+D L FGA +I + ++++++ + L + +F D
Sbjct: 255 --QCSHEKDIVVSDDTDALAFGAPNLIRFITNKKKRHIINKDEILNELDINYEQFID--- 309
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
CILSGCDY I G+G KA
Sbjct: 310 --FCILSGCDYSAKIPGIGPIKA 330
>gi|361128942|gb|EHL00867.1| putative Exonuclease 1 [Glarea lozoyensis 74030]
Length = 432
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+V++CM + ML + +VFDG +LP+K ATE +R KR E K+ EL +G
Sbjct: 43 FVDFCMHRVRMLQHFGVVPFLVFDGDYLPSKAATESERSKRRE-ESKRSGYELESAG 98
>gi|440491647|gb|ELQ74269.1| 5'-3' exonuclease [Trachipleistophora hominis]
Length = 441
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
Y +ITEDSDL+V+ ++YK GN M E+ A + +F + I
Sbjct: 162 NYVHSIITEDSDLIVYKCNNVLYKY---GNGYVMHYER--GAFRTA-NEFVCDNLLDVSI 215
Query: 261 LSGCDYWTGIKGMGLKKA 278
LSGCDY ++G+G+ A
Sbjct: 216 LSGCDYLENVRGVGISSA 233
>gi|356575281|ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
Length = 382
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 23/86 (26%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG V +ED D L FG+ K + L MD PS+ K+P+ +F AK
Sbjct: 170 AGKVYAVASEDMDSLTFGSPKFLRHL--------MD----PSSKKIPVMEFEVAKILEEL 217
Query: 255 ------FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY I+G+G
Sbjct: 218 NMTMDQFIDLCILSGCDYCDSIRGIG 243
>gi|221508520|gb|EEE34089.1| DNA-repair protein xp-G, putative [Toxoplasma gondii VEG]
Length = 2004
Score = 46.2 bits (108), Expect = 0.037, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 24/130 (18%)
Query: 180 PF-GARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK 238
PF A E + + +T++N+A D VI++DSD LVFGA++I F + +K
Sbjct: 1439 PFITAPGEAEATAAYLTKQNLA---DAVISDDSDALVFGAREIYRN--------FFENKK 1487
Query: 239 LPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE 291
+++M A F K + +L GCDY G+KG+G+ A + + + P E
Sbjct: 1488 ---SVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVKGIGIVNAVEVLRAY--PSLE 1542
Query: 292 NRKEYVKYAK 301
+ + + +A+
Sbjct: 1543 SLRAFRAWAE 1552
>gi|221487998|gb|EEE26212.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2004
Score = 46.2 bits (108), Expect = 0.037, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 24/130 (18%)
Query: 180 PF-GARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK 238
PF A E + + +T++N+A D VI++DSD LVFGA++I F + +K
Sbjct: 1439 PFITAPGEAEATAAYLTKQNLA---DAVISDDSDALVFGAREIYRN--------FFENKK 1487
Query: 239 LPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE 291
+++M A F K + +L GCDY G+KG+G+ A + + + P E
Sbjct: 1488 ---SVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVKGIGIVNAVEVLRAY--PSLE 1542
Query: 292 NRKEYVKYAK 301
+ + + +A+
Sbjct: 1543 SLRAFRAWAE 1552
>gi|237832503|ref|XP_002365549.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
gi|211963213|gb|EEA98408.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
Length = 2004
Score = 46.2 bits (108), Expect = 0.037, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 24/130 (18%)
Query: 180 PF-GARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK 238
PF A E + + +T++N+A D VI++DSD LVFGA++I F + +K
Sbjct: 1439 PFITAPGEAEATAAYLTKQNLA---DAVISDDSDALVFGAREIYRN--------FFENKK 1487
Query: 239 LPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE 291
+++M A F K + +L GCDY G+KG+G+ A + + + P E
Sbjct: 1488 ---SVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVKGIGIVNAVEVLRAY--PSLE 1542
Query: 292 NRKEYVKYAK 301
+ + + +A+
Sbjct: 1543 SLRAFRAWAE 1552
>gi|195382111|ref|XP_002049775.1| GJ21778 [Drosophila virilis]
gi|317374896|sp|B4LM90.1|FEN1_DROVI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194144572|gb|EDW60968.1| GJ21778 [Drosophila virilis]
Length = 386
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ K++ L S A KMP+ +F
Sbjct: 169 AGKVYATATEDMDALTFGSCKLLRYLTYS------------EARKMPVKEFSYDKVLQGL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
T +F +CIL GCDY IKG+G K+A + + S D
Sbjct: 217 ELTSKEFIDLCILMGCDYCESIKGVGPKRAIELIKSYRD 255
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 88 GNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGMGLKK 136
G+C + A KMP+ +F T +F +CIL GCDY IKG+G K+
Sbjct: 186 GSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCESIKGVGPKR 245
Query: 137 AKDYVFSIMDPDFENALRKINV 158
A + + S D E L I+
Sbjct: 246 AIELIKSYR--DIETILENIDT 265
>gi|34558672|gb|AAQ75078.1| RAD2 [Cryptosporidium parvum]
Length = 1147
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALK 244
E + S +T+ NI V+++DSD L+FGAKKI SGN M D ++ L
Sbjct: 900 EAEAQASILTQLNICHG---VLSDDSDCLIFGAKKIFRNF-FSGNSVEMYDLNQVKKYLG 955
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 274
+ + +F + IL GCDY G+ G+G
Sbjct: 956 IEKQE----QFYILAILLGCDYTVGVNGIG 981
>gi|413932542|gb|AFW67093.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 294
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 206 VITEDSDLLVFGAKKIIYKL-DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL 261
V +ED D L FGA++ + L DL D K+ L + + +F D +CIL
Sbjct: 176 VASEDMDTLTFGARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFID-----LCIL 230
Query: 262 SGCDYWTGIKGMGLKKA 278
SGCDY I+G+G ++A
Sbjct: 231 SGCDYCENIRGIGGQRA 247
>gi|397774993|ref|YP_006542539.1| flap structure-specific endonuclease [Natrinema sp. J7-2]
gi|397684086|gb|AFO58463.1| flap structure-specific endonuclease [Natrinema sp. J7-2]
Length = 325
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + +L G MD E + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPLTLRQLTSKGAPELMDLEATLAHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|448689147|ref|ZP_21694884.1| flap endonuclease-1 [Haloarcula japonica DSM 6131]
gi|445779017|gb|EMA29959.1| flap endonuclease-1 [Haloarcula japonica DSM 6131]
Length = 326
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG S + R G DYV TED D L+FGA + ++ G+ MD E +
Sbjct: 154 EGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFEATLERHDL 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD--PDFENRKEYVKYAK 301
+ DA IL G D+ GI G+G K A + D E R E++ +A
Sbjct: 211 TWEQLVDA-----AILMGTDFNEGISGIGPKTAVKELHEHGDLYTVLEARNEHIDHAD 263
>gi|3047083|gb|AAC13596.1| similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana]
Length = 362
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 209 VASEDMDSLTFGAPKFLRHL--------MD----PSSRKIPVMEFEVAKILEELQLTMDQ 256
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G + A
Sbjct: 257 FIDLCILSGCDYCDSIRGIGGQTA 280
>gi|66356946|ref|XP_625651.1| XPG, DNA excision repair protein, flap endonuclease
[Cryptosporidium parvum Iowa II]
gi|46226699|gb|EAK87678.1| XPG, DNA excision repair protein, flap endonuclease
[Cryptosporidium parvum Iowa II]
Length = 1147
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALK 244
E + S +T+ NI V+++DSD L+FGAKKI SGN M D ++ L
Sbjct: 900 EAEAQASILTQLNICHG---VLSDDSDCLIFGAKKIFRNF-FSGNSVEMYDLNQVKKYLG 955
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 274
+ + +F + IL GCDY G+ G+G
Sbjct: 956 IEKQE----QFYILAILLGCDYTVGVNGIG 981
>gi|448343822|ref|ZP_21532739.1| flap endonuclease-1 [Natrinema gari JCM 14663]
gi|445621905|gb|ELY75370.1| flap endonuclease-1 [Natrinema gari JCM 14663]
Length = 325
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FG+ + +L G MD E + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGSPLTLRQLTSKGAPELMDLEATLAHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|241706694|ref|XP_002413285.1| transmembrane protein, putative [Ixodes scapularis]
gi|215507099|gb|EEC16593.1| transmembrane protein, putative [Ixodes scapularis]
Length = 153
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 290 FENRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFNMK 341
F R+ +++YAKVFP + +L M + K YR +G EV+CG + +P +K
Sbjct: 37 FLQRRNFIQYAKVFPGSRLLGMTIDPKLYRLAVGWYEVVCGTILVLVPGRVK 88
>gi|242032391|ref|XP_002463590.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
gi|241917444|gb|EER90588.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
Length = 477
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKL-DLS---GNCCFMDREK 238
A E + +A+ E N YA V +ED D L FGA++ + L DL D K
Sbjct: 232 APGEAEAQCAALCE-NHQVYA--VASEDMDSLTFGARRFLRHLTDLGYKKSPVTEFDVSK 288
Query: 239 LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ L + + +F D +CILSGCDY IKG+G ++A
Sbjct: 289 VLEELGLTMDQFID-----LCILSGCDYCENIKGIGGQRA 323
>gi|402468038|gb|EJW03248.1| hypothetical protein EDEG_00228 [Edhazardia aedis USNM 41457]
Length = 362
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA---LKMPLA--KFTDA 253
I G D V TED D L FGA ++ L+ + N +KLP LK L K
Sbjct: 169 IKGVVDAVATEDMDALTFGAPILLRNLNAAEN------KKLPIVEYNLKEILKELKINHN 222
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVK 298
+F +CI+ GCDY ++G G K+A + + D + KE +K
Sbjct: 223 QFIDVCIMLGCDYVKPLRGFGPKRAYEMILKHKDIETILEKEKIK 267
>gi|67589751|ref|XP_665434.1| RAD2 [Cryptosporidium hominis TU502]
gi|54656123|gb|EAL35205.1| RAD2 [Cryptosporidium hominis]
Length = 1158
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALK 244
E + S +T+ NI V+++DSD L+FGAKKI SGN M D + +K
Sbjct: 911 EAEAQASILTQLNICHG---VLSDDSDCLIFGAKKIFRNF-FSGNSVEMYDL----NQVK 962
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 274
L +F + IL GCDY G+ G+G
Sbjct: 963 KYLGIEKQEQFYILAILLGCDYTVGVNGIG 992
>gi|448352039|ref|ZP_21540831.1| flap endonuclease-1 [Natrialba taiwanensis DSM 12281]
gi|445631838|gb|ELY85062.1| flap endonuclease-1 [Natrialba taiwanensis DSM 12281]
Length = 316
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPERMDLQATLDHHDLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|405956075|gb|EKC22899.1| Uncharacterized protein C11orf65-like protein [Crassostrea gigas]
Length = 664
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 291 ENRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFNMKVPAK 345
E RK Y+K AKVFPL K + YR++IG EV+CG ++ IP +K A
Sbjct: 36 EMRKMYIKNAKVFPLVKWTKWKPNSHMYRKVIGGSEVVCGAILSFIPGPLKEAAN 90
>gi|145336239|ref|NP_174256.2| exonuclease 1 [Arabidopsis thaliana]
gi|332192990|gb|AEE31111.1| exonuclease 1 [Arabidopsis thaliana]
Length = 665
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K IMVFDG LP K +E++R R+ + +A E +G+S
Sbjct: 55 HIQYCMHRVNLLRHHGVKPIMVFDGGPLPMK-LEQENKRARSRKENLARALEHEANGNS 112
>gi|22655212|gb|AAM98196.1| exonuclease, putative [Arabidopsis thaliana]
Length = 665
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K IMVFDG LP K +E++R R+ + +A E +G+S
Sbjct: 55 HIQYCMHRVNLLRHHGVKPIMVFDGGPLPMK-LEQENKRARSRKENLARALEHEANGNS 112
>gi|390353866|ref|XP_788478.2| PREDICTED: transmembrane protein 35-like [Strongylocentrotus
purpuratus]
Length = 184
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 282 VFSIMDPDFE--NRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATI 336
++ ++D D +K +V YA+V PL L+MK A YR +GS+E++ GF + ++
Sbjct: 25 LYPMLDQDLHLSMKKHFVNYARVAPLRTNLNMKFKASQYRSAVGSLEIVGGFGLLSM 81
>gi|68059974|ref|XP_671969.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488629|emb|CAI03948.1| hypothetical protein PB301454.00.0 [Plasmodium berghei]
Length = 151
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D V+++D+D L FGA +I + ++++++ + L + +F D CILSG
Sbjct: 22 DIVVSDDTDALAFGAPNLIRFITNKKKRHIINKDEILNELNINYEQFID-----FCILSG 76
Query: 264 CDYWTGIKGMGLKKA 278
CDY I G+G KA
Sbjct: 77 CDYSAKIPGIGPIKA 91
>gi|378754698|gb|EHY64727.1| flap endonuclease 1-B [Nematocida sp. 1 ERTm2]
Length = 342
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 165 YVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKII-- 222
+V+ + L++ A NE +A+ NIA + V++ED D L FG K ++
Sbjct: 134 HVESAQALLSAMGVPYMTAPNEAEGFCAAL---NIANAVNGVVSEDMDSLAFGGKVLLRN 190
Query: 223 -YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 281
+ + M+ L LK A+F MCIL GCDY KG+G KK D
Sbjct: 191 FFPALMKKKMAVMEI-SLDEVLKQ--TGLDQAEFIDMCILLGCDYCQKPKGLGPKKVYDL 247
Query: 282 V 282
V
Sbjct: 248 V 248
>gi|401413646|ref|XP_003886270.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
gi|325120690|emb|CBZ56245.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
Length = 545
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA----KFTDAKFRYMCIL 261
TED+D L FGA ++I L S + +P KF+ +F CIL
Sbjct: 177 TATEDADALTFGATRLIRNLTFSERTGSSASASAILVIDLPTLLEELKFSQEQFIDFCIL 236
Query: 262 SGCDYWTGIKGMGLKKA 278
GCDY +KG+G K A
Sbjct: 237 CGCDYCGTLKGVGAKTA 253
>gi|317374937|sp|C5WU23.2|FEN12_SORBI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
Length = 428
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKL-DLS---GNCCFMDREK 238
A E + +A+ E N YA V +ED D L FGA++ + L DL D K
Sbjct: 183 APGEAEAQCAALCE-NHQVYA--VASEDMDSLTFGARRFLRHLTDLGYKKSPVTEFDVSK 239
Query: 239 LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ L + + +F D +CILSGCDY IKG+G ++A
Sbjct: 240 VLEELGLTMDQFID-----LCILSGCDYCENIKGIGGQRA 274
>gi|302810129|ref|XP_002986756.1| hypothetical protein SELMODRAFT_425660 [Selaginella moellendorffii]
gi|300145410|gb|EFJ12086.1| hypothetical protein SELMODRAFT_425660 [Selaginella moellendorffii]
Length = 336
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLS-----GNCCFMDREKLPSALKMPLAKFTD 252
N G+AD T DSD L+FGA K++YK D+S + D K+ +A +
Sbjct: 51 NAMGFADACFTADSDALLFGA-KVVYK-DISLKPGESHVVAYDMTKIRNAF-----GYGR 103
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ IL GCDY+ G+ G+G +KA+ V
Sbjct: 104 NSLIALGILLGCDYFPGVHGLGPEKAQQIV 133
>gi|159475218|ref|XP_001695720.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
gi|317374883|sp|A8J2Z9.1|FEN1_CHLRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158275731|gb|EDP01507.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
Length = 396
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
+ TED D L FGA ++I L PS+ +P+ +F TD +
Sbjct: 176 LATEDMDALTFGAPRVIRHL------------MAPSSQNVPVQEFDREVALRELELTDDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY I+G+G +A
Sbjct: 224 FIDLCILMGCDYCGTIRGIGAVRA 247
>gi|194756700|ref|XP_001960614.1| GF13444 [Drosophila ananassae]
gi|317374888|sp|B3MDA3.1|FEN1_DROAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190621912|gb|EDV37436.1| GF13444 [Drosophila ananassae]
Length = 388
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +F+
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYEKLLDGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+ +F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 GVNNREFIDLCILLGCDYCESIKGIGPKRAIELINNYRD 255
>gi|156084852|ref|XP_001609909.1| XPG I-region family protein [Babesia bovis]
gi|154797161|gb|EDO06341.1| XPG I-region family protein [Babesia bovis]
Length = 501
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
Y+ + + +++LL+HKI IMVFDG +P KE + RR+R + ++ A + +G +I
Sbjct: 67 YIKFIVSILSVLLSHKITPIMVFDGYDMPTKETENQLRRERRDKAREEALAMIEKNGGAI 126
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 24/99 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
+G A ++EDSDLLV+G ++ +KL+ G L + K D K
Sbjct: 176 SGIAYAALSEDSDLLVYGCPRVWFKLERDGKA---------DELTLGFNKDPDVKCNTGL 226
Query: 255 --------FRYMCILSGCDYWTG--IKGMGLKKAKDYVF 283
F MC+LSG DY G I GMG+K A ++
Sbjct: 227 LKGLSHRMFIAMCVLSGSDYDNGCHIHGMGIKLAHRFIL 265
>gi|413932541|gb|AFW67092.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 411
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKL-DLS---GNCCFMDREK 238
A E + +A+ E N YA V +ED D L FGA++ + L DL D K
Sbjct: 156 APGEAEAQCAALCE-NHQVYA--VASEDMDTLTFGARRFLRHLTDLGYKKSPVTEFDVSK 212
Query: 239 LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ L + + +F D +CILSGCDY I+G+G ++A
Sbjct: 213 VLEELGLTMDQFID-----LCILSGCDYCENIRGIGGQRA 247
>gi|281202271|gb|EFA76476.1| 5'3'-exonuclease N- and I-domain-containing protein
[Polysphondylium pallidum PN500]
Length = 670
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 84 LDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 141
+D G C + E L + LA F R+MCILSGCDY + GMGLK A Y+
Sbjct: 1 MDKEGYCEEIKTEDLATCKGKDYDLADFNLTMLRHMCILSGCDYLPSLTGMGLKTAYKYL 60
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 225 LDLSGNCCFMDREKLPS--ALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+D G C + E L + LA F R+MCILSGCDY + GMGLK A Y+
Sbjct: 1 MDKEGYCEEIKTEDLATCKGKDYDLADFNLTMLRHMCILSGCDYLPSLTGMGLKTAYKYL 60
>gi|294891258|ref|XP_002773499.1| Flap structure-specific endonuclease, putative [Perkinsus marinus
ATCC 50983]
gi|239878652|gb|EER05315.1| Flap structure-specific endonuclease, putative [Perkinsus marinus
ATCC 50983]
Length = 221
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 6/55 (10%)
Query: 20 LYVNYCMKYINMLLAHKI-KVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
L++NYC++ + +LL+ + +V++VFDG LPAK E++R+KR +Q+A EL
Sbjct: 58 LHLNYCVRRLEVLLSAGVAEVVLVFDGCPLPAKLGVEDERQKR-----RQEAREL 107
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDL 227
+ G D VI+EDSDLL FG +IYKLDL
Sbjct: 169 LNGLVDAVISEDSDLLPFGCPHVIYKLDL 197
>gi|448362827|ref|ZP_21551431.1| flap endonuclease-1 [Natrialba asiatica DSM 12278]
gi|445647449|gb|ELZ00423.1| flap endonuclease-1 [Natrialba asiatica DSM 12278]
Length = 291
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPERMDLQATLDHHGLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G+ G+G K A
Sbjct: 220 LIGTDFNEGVSGIGPKTA 237
>gi|195584050|ref|XP_002081828.1| GD25512 [Drosophila simulans]
gi|317374895|sp|B4QIG6.1|FEN1_DROSI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194193837|gb|EDX07413.1| GD25512 [Drosophila simulans]
Length = 385
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +F+
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYDKLLEGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+ +F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 AINNREFIDLCILLGCDYCESIKGIGPKRAIELINTYRD 255
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V +ED D L FGA K + L MD PS+ K+P+ +F T +
Sbjct: 192 VASEDMDSLTFGASKFLRHL--------MD----PSSRKIPVMEFDITKILEELNLTMDQ 239
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G + A
Sbjct: 240 FIDLCILSGCDYCDSIRGIGGQTA 263
>gi|399576495|ref|ZP_10770250.1| flap endonuclease-1 [Halogranum salarium B-1]
gi|399237939|gb|EJN58868.1| flap endonuclease-1 [Halogranum salarium B-1]
Length = 326
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG + S + R G ADYV +ED D L+FGA + +L G+ MD + + +
Sbjct: 154 EGEAQASYMARR---GDADYVGSEDYDTLLFGAPFTLRQLTSKGDPELMDLDATLAKHDI 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ D + IL G D+ GIKG+G K A
Sbjct: 211 SYEQLVD-----IAILVGTDFNPGIKGIGPKTA 238
>gi|198477405|ref|XP_002136633.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
gi|317374893|sp|B5DUR8.1|FEN1_DROPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|198142925|gb|EDY71637.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
Length = 386
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +F+
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYDKLLEGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+ +F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 EVNNREFIDLCILLGCDYCESIKGIGPKRAIELINNYRD 255
>gi|430812753|emb|CCJ29874.1| unnamed protein product [Pneumocystis jirovecii]
Length = 225
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGN----CCFMDREKLPSALKMPLAKFTDAKF 255
AG +ED D+L F ++ L S ++ EK L MPL +F D
Sbjct: 47 AGKVYAAASEDMDILCFSTPILLRHLTFSEQKKEPITEVNLEKALKELNMPLEQFVD--- 103
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY IKG+G K+A + +
Sbjct: 104 --LCILLGCDYCEPIKGIGPKRALELI 128
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 96 EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 141
EK L MPL +F D +CIL GCDY IKG+G K+A + +
Sbjct: 88 EKALKELNMPLEQFVD-----LCILLGCDYCEPIKGIGPKRALELI 128
>gi|296089863|emb|CBI39682.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
+G V +ED D L FGA K + L MD PS+ K+P+ +F
Sbjct: 170 SGKVYAVASEDMDSLTFGAPKFLRHL--------MD----PSSRKIPVMEFDITKILEEL 217
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKA 278
T +F +CILSGCDY I+G+G + A
Sbjct: 218 NLTMDQFIDLCILSGCDYCDSIRGIGGQTA 247
>gi|195155221|ref|XP_002018504.1| GL16728 [Drosophila persimilis]
gi|317374892|sp|B4GIM3.1|FEN1_DROPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194114300|gb|EDW36343.1| GL16728 [Drosophila persimilis]
Length = 386
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +F+
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYDKLLEGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+ +F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 EVNNREFIDLCILLGCDYCESIKGIGPKRAIELINNYRD 255
>gi|17647423|ref|NP_523765.1| flap endonuclease 1 [Drosophila melanogaster]
gi|122102839|sp|Q7K7A9.1|FEN1_DROME RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3929699|emb|CAA21320.1| EG:EG0003.3 [Drosophila melanogaster]
gi|7302871|gb|AAF57944.1| flap endonuclease 1 [Drosophila melanogaster]
gi|261260009|gb|ACX54939.1| MIP14376p [Drosophila melanogaster]
Length = 385
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +F+
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYDKLLEGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+ +F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 AINNREFIDLCILLGCDYCESIKGIGPKRAIELINTYRD 255
>gi|195335051|ref|XP_002034189.1| GM20026 [Drosophila sechellia]
gi|317374894|sp|B4HTA1.1|FEN1_DROSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194126159|gb|EDW48202.1| GM20026 [Drosophila sechellia]
Length = 385
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +F+
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYDKLLEGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+ +F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 AINNREFIDLCILLGCDYCESIKGIGPKRAIELINTYRD 255
>gi|430813459|emb|CCJ29208.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGN----CCFMDREKLPSALKMPLAKFTDAKF 255
AG +ED D+L F ++ L S ++ EK L MPL +F D
Sbjct: 170 AGKVYAAASEDMDILCFSTPILLRHLTFSEQKKEPITEVNLEKALKELNMPLEQFVD--- 226
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYV--FSIMDP--DFENRKEYV 297
+CIL GCDY IKG+G K+A + + + +D +F ++ +Y+
Sbjct: 227 --LCILLGCDYCEPIKGIGPKRALELIREYKSLDAFINFADKSKYI 270
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 96 EKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 141
EK L MPL +F D +CIL GCDY IKG+G K+A + +
Sbjct: 211 EKALKELNMPLEQFVD-----LCILLGCDYCEPIKGIGPKRALELI 251
>gi|257053576|ref|YP_003131409.1| flap endonuclease-1 [Halorhabdus utahensis DSM 12940]
gi|256692339|gb|ACV12676.1| XPG I domain protein [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 166 VKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKL 225
++ T+E L A EG + + + R G DYV TED D L+FGA + +L
Sbjct: 134 LETTRELLALLDVPTVDAPAEGEAQAAHMARR---GDVDYVGTEDYDALLFGAPFTLRQL 190
Query: 226 DLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
SG+ MD E + + + D + +L G D+ G++G G K A
Sbjct: 191 TSSGDPELMDFEATLAEHDLSWEQLVD-----VALLCGTDFNDGVRGYGPKTA 238
>gi|357624246|gb|EHJ75100.1| flap endonuclease-1 [Danaus plexippus]
Length = 424
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V TED D L FGA ++ L S A KMP+ +F +
Sbjct: 221 VATEDMDALTFGANVLLRHLTFS------------EARKMPVQEFHLDQVLRGLELEQTE 268
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G K+A
Sbjct: 269 FIDLCILLGCDYCGSIKGIGPKRA 292
>gi|255543058|ref|XP_002512592.1| flap endonuclease-1, putative [Ricinus communis]
gi|223548553|gb|EEF50044.1| flap endonuclease-1, putative [Ricinus communis]
Length = 345
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 23/80 (28%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F +K
Sbjct: 138 VASEDMDSLTFGAPRFLRHL--------MD----PSSRKVPVMEFETSKILEELNLTMDQ 185
Query: 255 FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY I+G+G
Sbjct: 186 FIDLCILSGCDYCDSIRGIG 205
>gi|156093896|ref|XP_001612986.1| DNA repair endonuclease [Plasmodium vivax Sal-1]
gi|148801860|gb|EDL43259.1| DNA repair endonuclease, putative [Plasmodium vivax]
Length = 1473
Score = 45.1 bits (105), Expect = 0.069, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK----FTDA 253
N Y D +I++DSD+LVF K +I F +R+K + L +
Sbjct: 1164 NCKNYCDAIISDDSDVLVFNGKTVIKN--------FFNRKKTVEVYERKLIEDKLGLYQD 1215
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKE 295
+ + +L GCDY G+ G+G+ A + + + P FE+ K+
Sbjct: 1216 ELINLSLLCGCDYTIGVHGVGIVNALEIIKAF--PTFEDLKK 1255
>gi|357601961|gb|EHJ63212.1| flap endonuclease-1 [Danaus plexippus]
Length = 266
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V TED D L FGA ++ L S A KMP+ +F +
Sbjct: 63 VATEDMDALTFGANVLLRHLTFS------------EARKMPVQEFHLDQVLRGLELEQTE 110
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G K+A
Sbjct: 111 FIDLCILLGCDYCGSIKGIGPKRA 134
>gi|302772224|ref|XP_002969530.1| hypothetical protein SELMODRAFT_410274 [Selaginella moellendorffii]
gi|300163006|gb|EFJ29618.1| hypothetical protein SELMODRAFT_410274 [Selaginella moellendorffii]
Length = 454
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLS-----GNCCFMDREKLPSALKMPLAKFTD 252
N G+AD T DSD L+FGA K++YK D+S + D K+ +A +
Sbjct: 51 NAMGFADACFTADSDALLFGA-KVVYK-DISLKPGESHVVAYDMTKIRNAF-----GYGR 103
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ IL GCDY+ G+ G+G +KA+ V
Sbjct: 104 NSLIALGILLGCDYFPGVHGLGPEKAQQIV 133
>gi|448365125|ref|ZP_21553668.1| flap endonuclease-1 [Natrialba aegyptia DSM 13077]
gi|445656129|gb|ELZ08969.1| flap endonuclease-1 [Natrialba aegyptia DSM 13077]
Length = 325
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 52/135 (38%), Gaps = 43/135 (31%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L G+ MD + + L + DA I
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPERMDLQATLDHHGLTLEQLIDA-----AI 219
Query: 261 LSGCDYWTGIKGMGLKKA-------------------------------------KDYVF 283
L G D+ G+ G+G K A DY F
Sbjct: 220 LIGTDFNEGVSGIGPKTAIAEITEHGDLWGVLEARGDSIRYGDRVRELFREPNVTDDYEF 279
Query: 284 S-IMDPDFENRKEYV 297
S +DPD + +EYV
Sbjct: 280 STTLDPDLDAAREYV 294
>gi|154420990|ref|XP_001583509.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
gi|121917751|gb|EAY22523.1| XPG N-terminal domain containing protein [Trichomonas vaginalis G3]
Length = 317
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
YAD V+TED+DL+ + + ++KLD GN ++ ++L L + +FT CI
Sbjct: 157 NYADIVLTEDTDLICYKSPVTLFKLDSKGNVDYVIYQELIDFLGLSSDQFTQ-----FCI 211
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMD 287
L Y I+ MG K A D + + D
Sbjct: 212 LITDVYGKHIRMMGFKTALDLMKKLGD 238
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 14 KKLLQH----LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQK 69
K+LL+ L +NYC K I ML ++ ++ VFDGR LP K T ++R+ EIR + K
Sbjct: 44 KQLLEDPSTPLILNYCKKNIEMLKSNGLQPYFVFDGRPLPGKAETNKERK---EIREEAK 100
Query: 70 AAELLHSGSS 79
+ + SG S
Sbjct: 101 KS--IESGES 108
>gi|359487708|ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
Length = 384
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V +ED D L FGA K + L MD PS+ K+P+ +F T +
Sbjct: 176 VASEDMDSLTFGAPKFLRHL--------MD----PSSRKIPVMEFDITKILEELNLTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G + A
Sbjct: 224 FIDLCILSGCDYCDSIRGIGGQTA 247
>gi|313126141|ref|YP_004036411.1| flap endonuclease 1 [Halogeometricum borinquense DSM 11551]
gi|448285981|ref|ZP_21477218.1| flap endonuclease-1 [Halogeometricum borinquense DSM 11551]
gi|312292506|gb|ADQ66966.1| flap endonuclease 1 [Halogeometricum borinquense DSM 11551]
gi|445575574|gb|ELY30047.1| flap endonuclease-1 [Halogeometricum borinquense DSM 11551]
Length = 326
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G DYV +ED D L+ GA + +L G+ MD E S L + + D + I
Sbjct: 166 GDVDYVGSEDYDTLLLGAPYTLRQLTSKGDPELMDLEATLSDLDVTQEQLID-----IAI 220
Query: 261 LSGCDYWTGIKGMG----LKKAKDY--VFSIMDPDFENRKEYVKYAK 301
L G D+ GI G+G LK+ K++ +++++ E R +Y++ A
Sbjct: 221 LCGTDFNEGISGVGPKTALKEVKEHGDLWTVL----EARDDYIENAD 263
>gi|343172070|gb|AEL98739.1| endonuclease, partial [Silene latifolia]
gi|343172072|gb|AEL98740.1| endonuclease, partial [Silene latifolia]
Length = 325
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 23/80 (28%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA K + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGACKFLRHL--------MD----PSSKKIPVMEFDMAKVLEELNLTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY IKG+G
Sbjct: 224 FIDLCILSGCDYCDNIKGIG 243
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 88 GNCCFMDREKLPSALKMPLAKFTDAK-----------FRYMCILSGCDYWTGIKGMG 133
G C F+ PS+ K+P+ +F AK F +CILSGCDY IKG+G
Sbjct: 187 GACKFLRHLMDPSSKKIPVMEFDMAKVLEELNLTMDQFIDLCILSGCDYCDNIKGIG 243
>gi|448602383|ref|ZP_21656439.1| flap endonuclease-1 [Haloferax sulfurifontis ATCC BAA-897]
gi|445747898|gb|ELZ99352.1| flap endonuclease-1 [Haloferax sulfurifontis ATCC BAA-897]
Length = 326
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYM 258
G ADYV +ED D L+FGA + +L GN MD L LAK T + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMD-------LDATLAKHDITYEQLVDI 218
Query: 259 CILSGCDYWTGIKGMGLKKA 278
+L G D+ GI G+G K A
Sbjct: 219 AMLCGTDFNEGITGIGPKTA 238
>gi|241122956|ref|XP_002403737.1| exonuclease, putative [Ixodes scapularis]
gi|215493512|gb|EEC03153.1| exonuclease, putative [Ixodes scapularis]
Length = 167
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL 243
E + L+ +T+R G AD VITEDSDL++FG +K+++K+D G +R + L
Sbjct: 110 EADAQLAYLTQR---GLADVVITEDSDLILFGCEKVVFKMDQGGFGTLYERSAIGKCL 164
>gi|195025439|ref|XP_001986060.1| GH21157 [Drosophila grimshawi]
gi|317374890|sp|B4J6M4.1|FEN1_DROGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193902060|gb|EDW00927.1| GH21157 [Drosophila grimshawi]
Length = 388
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ K++ L S A KMP+ +F
Sbjct: 169 AGKVYATATEDMDALTFGSCKLLRYLTYS------------EARKMPVKEFSYDKVLQGL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
T +F +CIL GCDY I+G+G K+A + + S D
Sbjct: 217 ELTSKEFIDLCILMGCDYCESIRGVGPKRAIELIKSYRD 255
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 88 GNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGMGLKK 136
G+C + A KMP+ +F T +F +CIL GCDY I+G+G K+
Sbjct: 186 GSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCESIRGVGPKR 245
Query: 137 AKDYVFSIMDPDFENALRKINV 158
A + + S D E L I+
Sbjct: 246 AIELIKSYR--DIETILENIDT 265
>gi|448382773|ref|ZP_21562268.1| flap endonuclease-1 [Haloterrigena thermotolerans DSM 11522]
gi|445661242|gb|ELZ14033.1| flap endonuclease-1 [Haloterrigena thermotolerans DSM 11522]
Length = 325
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK---MPLAKFTDAKFRY 257
G ADYV +ED D L+FGA + +L G+ MD L + LK + L + DA
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMD---LAATLKRHDLTLEQLIDA---- 217
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
IL G D+ G+ G+G K A
Sbjct: 218 -AILIGTDFNDGVSGIGPKTA 237
>gi|433592003|ref|YP_007281499.1| flap structure-specific endonuclease [Natrinema pellirubrum DSM
15624]
gi|448334339|ref|ZP_21523517.1| flap endonuclease-1 [Natrinema pellirubrum DSM 15624]
gi|433306783|gb|AGB32595.1| flap structure-specific endonuclease [Natrinema pellirubrum DSM
15624]
gi|445620225|gb|ELY73731.1| flap endonuclease-1 [Natrinema pellirubrum DSM 15624]
Length = 325
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK---MPLAKFTDAKFRY 257
G ADYV +ED D L+FGA + +L G+ MD L + LK + L + DA
Sbjct: 165 GDADYVGSEDYDALLFGAPLTLRQLTSKGDPELMD---LAATLKRHDLTLEQLIDA---- 217
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
IL G D+ G+ G+G K A
Sbjct: 218 -AILIGTDFNDGVSGIGPKTA 237
>gi|390332710|ref|XP_001197560.2| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like
[Strongylocentrotus purpuratus]
Length = 384
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-----------DAK 254
V TED D L FG ++ L +S A KMP+ +F +
Sbjct: 175 VGTEDMDALTFGGNVLLRHLTVS------------EARKMPIQEFNYQRVLEGLGLNRQQ 222
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G+K+A
Sbjct: 223 FIDLCILMGCDYCGTIKGIGMKRA 246
>gi|195123149|ref|XP_002006071.1| GI18754 [Drosophila mojavensis]
gi|317374891|sp|B4KNM1.1|FEN1_DROMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193911139|gb|EDW10006.1| GI18754 [Drosophila mojavensis]
Length = 388
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ K++ L S A KMP+ +F
Sbjct: 169 AGKVYATATEDMDALTFGSCKLLRYLTYS------------EARKMPVKEFSYDKVLQGL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
T +F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 ELTSKEFIDLCILMGCDYCDSIKGIGPKRAIELIKTYRD 255
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 88 GNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGMGLKK 136
G+C + A KMP+ +F T +F +CIL GCDY IKG+G K+
Sbjct: 186 GSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCDSIKGIGPKR 245
Query: 137 AKDYVFSIMDPDFENALRKINV 158
A + + + D E L I+
Sbjct: 246 AIELIKTYR--DIETILENIDT 265
>gi|399218750|emb|CCF75637.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLD----LSGNCCFMDREKLPSA--LKMPLAKFTDA- 253
G AD TED+D L FG +I L +S N K P + L++ L K +
Sbjct: 172 GIADVASTEDTDCLTFGTPVLIRNLSNALAISSNKNSKFNSKSPKSHLLRIDLNKTLNGF 231
Query: 254 -----KFRYMCILSGCDYWTGIKGMGLKKA 278
+F +CIL GCDY +KG+G K A
Sbjct: 232 KLNINQFVDLCILCGCDYCGKLKGVGPKTA 261
>gi|443707879|gb|ELU03263.1| hypothetical protein CAPTEDRAFT_181278 [Capitella teleta]
Length = 161
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 291 ENRKEYVKYAKVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFNMK 341
E RK ++++AKVFP + K A+ R+ +G+ EV+CG + IP ++K
Sbjct: 36 EMRKVFIRHAKVFPFQELTGWKPNAQSLRKFVGTTEVVCGVILVMIPGSLK 86
>gi|145343647|ref|XP_001416426.1| Exodeoxyribonuclease I [Ostreococcus lucimarinus CCE9901]
gi|144576651|gb|ABO94719.1| Exodeoxyribonuclease I [Ostreococcus lucimarinus CCE9901]
Length = 701
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 21/117 (17%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGN---CCFMDREKLPSALKMPLAK------- 249
+G D+V+T+D+D +V G K+++K+ S + C +R L+MP+
Sbjct: 136 SGLVDFVLTDDTDAVVLGCAKVVHKVSWSVSTLKCNVFNRNN----LRMPVDTNEVNTVA 191
Query: 250 -----FTDAKFRYMCILSGCDYWTG-IKGMGLKKA-KDYVFSIMDPDFENRKEYVKY 299
DA R SGCDY G + G+G + A K V I + + + +VKY
Sbjct: 192 ELMCMHGDAAMRLWAAASGCDYREGKVPGLGPQTALKAIVACIQSAETLSIRSFVKY 248
>gi|88603762|ref|YP_503940.1| flap endonuclease-1 [Methanospirillum hungatei JF-1]
gi|121721338|sp|Q2FNC9.1|FEN_METHJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|88189224|gb|ABD42221.1| flap endonuclease 1 [Methanospirillum hungatei JF-1]
Length = 333
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA------KFTD 252
+ G ADYV+++D D L+FG ++ L +SG R+ ++ L+ T
Sbjct: 163 LKGDADYVVSQDYDTLLFGTPVLVRNLTISGKRRLHGRQITVQPERIVLSDVLSTLDITR 222
Query: 253 AKFRYMCILSGCDYWTGIKGM----GLKKAKDYVF-SIMD---PDFE 291
+ + IL+G D+ GI+G+ GLKK K F SI+ PDF+
Sbjct: 223 EQLIEIAILTGTDFNPGIRGIGAKTGLKKIKSGEFDSIIREKLPDFD 269
>gi|195488056|ref|XP_002092153.1| GE14031 [Drosophila yakuba]
gi|317374898|sp|B4P5U9.1|FEN1_DROYA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194178254|gb|EDW91865.1| GE14031 [Drosophila yakuba]
Length = 387
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG TED D L FG+ K++ L S A KMP+ +F+ K
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYEKLLEGL 216
Query: 255 ------FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 SINSREFIDLCILLGCDYCESIKGIGPKRAIELINNYRD 255
>gi|402470077|gb|EJW04530.1| hypothetical protein EDEG_04217 [Edhazardia aedis USNM 41457]
Length = 211
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLS 228
GY DY++TEDSDL+V+GA KI+YK D S
Sbjct: 162 GYIDYILTEDSDLVVYGADKILYKFDGS 189
>gi|440795563|gb|ELR16683.1| hypothetical protein ACA1_089310 [Acanthamoeba castellanii str.
Neff]
Length = 343
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 31/129 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK------FTDA 253
AG V +ED D L FGA ++ L F + KLP +++ L K T
Sbjct: 152 AGKVFAVGSEDMDALTFGAPVLLRHL------TFSEARKLP-IVEIELPKVLEGLGLTME 204
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKA---------KDYVFSIMD------PD---FENRKE 295
+F +CIL+GCDY I+G+G K+A + V +D PD FE +E
Sbjct: 205 QFIDLCILAGCDYCDTIRGVGPKRALALIKQHGSVEQVIKNLDKAKNPLPDQFPFEATRE 264
Query: 296 YVKYAKVFP 304
K+ V P
Sbjct: 265 LFKHPNVIP 273
>gi|401408171|ref|XP_003883534.1| T10O22.7, related [Neospora caninum Liverpool]
gi|325117951|emb|CBZ53502.1| T10O22.7, related [Neospora caninum Liverpool]
Length = 959
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 34/111 (30%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP--------------SALKMPLAKFT 251
++EDSDLL G ++++K+D GNC +R LP L+K
Sbjct: 144 AVSEDSDLLAHGCGQVLFKMDKEGNC---ERLVLPLKDSTSLAFTSSTSGPQSSSLSKDA 200
Query: 252 DAK---------------FRYMCILSGCDYWTG--IKGMGLKKAKDYVFSI 285
+AK F MC+L GCDY I G+G+ A +V +
Sbjct: 201 NAKKLGQLECLRDFDQKMFTAMCVLGGCDYTHDVHINGLGISTACRFVHKL 251
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 75/201 (37%), Gaps = 81/201 (40%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELL------ 74
++ + + I + H+++ ++VFDG +PAK A E+++R++A ++ ++A +LL
Sbjct: 55 FLRFVIHMIMLFKYHRVEPLLVFDGAKIPAK-AAEDEKRQQARLKASEEARQLLKQHEEA 113
Query: 75 ----------------------------------------HSGSSIIYKLDLSGNCCFMD 94
H +++K+D GNC +
Sbjct: 114 RRANRKPPGDTRELLTKCAQGISISPEMAAAVSEDSDLLAHGCGQVLFKMDKEGNC---E 170
Query: 95 REKLP--------------SALKMPLAKFTDAK---------------FRYMCILSGCDY 125
R LP L+K +AK F MC+L GCDY
Sbjct: 171 RLVLPLKDSTSLAFTSSTSGPQSSSLSKDANAKKLGQLECLRDFDQKMFTAMCVLGGCDY 230
Query: 126 WTG--IKGMGLKKAKDYVFSI 144
I G+G+ A +V +
Sbjct: 231 THDVHINGLGISTACRFVHKL 251
>gi|123335114|ref|XP_001294157.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121871805|gb|EAX81227.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 335
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG D + TED D L F ++I L D ++ + M + T +F
Sbjct: 136 NKAGLVDAMATEDMDSLAFATPQLIRHLSYGAKG--DDLLQIDYKIMMEKSGLTREEFVD 193
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
CIL GCDY IKG+G K A
Sbjct: 194 FCILMGCDYCDTIKGIGKKHA 214
>gi|312385968|gb|EFR30352.1| hypothetical protein AND_00127 [Anopheles darlingi]
Length = 385
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A KMP+ +F
Sbjct: 169 AGKVYATATEDMDALTFGSNILLRHLTFS------------EARKMPVQEFHYEKVLKGF 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKA 278
T +F MCIL GCDY I+G+G KKA
Sbjct: 217 ELTADEFIDMCILLGCDYCDTIRGIGPKKA 246
>gi|194882401|ref|XP_001975300.1| GG22240 [Drosophila erecta]
gi|317374889|sp|B3NP61.1|FEN1_DROER RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190658487|gb|EDV55700.1| GG22240 [Drosophila erecta]
Length = 387
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFT-------- 251
AG TED D L FG+ K++ L S A KMP+ +F+
Sbjct: 169 AGKVYATATEDMDALTFGSTKLLRYLTYS------------EARKMPVKEFSYDKLLEGL 216
Query: 252 ---DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
+F +CIL GCDY IKG+G K+A + + + D
Sbjct: 217 SINSREFIDLCILLGCDYCESIKGIGPKRAIELINNYRD 255
>gi|351737540|gb|AEQ60575.1| putative endonuclease of the XPG family [Acanthamoeba castellanii
mamavirus]
gi|398257219|gb|EJN40827.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
lentillevirus]
Length = 473
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 189 SLLSAVTERNIAGYADYVITEDSDLLVFGA----KKIIYKLDLSGNCCFMDREKLPSALK 244
S L A + N Y V TEDSD+L GA K ++ +L+ N + + + L
Sbjct: 163 SWLCARHDSNGKRYVKGVCTEDSDMLPLGAPYMFKDMLGLNNLNKNIIIVKLKDVLGFLG 222
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ + +F D +C+L GCDY IKG+G K A
Sbjct: 223 LTMNEFID-----LCVLLGCDYCDNIKGIGPKNA 251
>gi|311977771|ref|YP_003986891.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|82000308|sp|Q5UQW7.1|YL386_MIMIV RecName: Full=Putative endonuclease L386
gi|55417005|gb|AAV50655.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|308204373|gb|ADO18174.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|339061318|gb|AEJ34622.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
Length = 473
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 189 SLLSAVTERNIAGYADYVITEDSDLLVFGA----KKIIYKLDLSGNCCFMDREKLPSALK 244
S L A + N Y V TEDSD+L GA K ++ +L+ N + + + L
Sbjct: 163 SWLCARHDSNGKRYVKGVCTEDSDMLPLGAPYMFKDMLGLNNLNKNIIIVKLKDVLGFLG 222
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ + +F D +C+L GCDY IKG+G K A
Sbjct: 223 LTMNEFID-----LCVLLGCDYCDNIKGIGPKNA 251
>gi|317419778|emb|CBN81814.1| Flap endonuclease 1-B [Dicentrarchus labrax]
Length = 380
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVFATATEDMDGLTFGTNVLLRHLTAS------------EAKKLPIQEFHFSRMLQDI 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T+ +F +CIL GCDY IKG+G K+A D +
Sbjct: 217 GLTNEQFIDLCILLGCDYCATIKGIGPKRAIDLI 250
>gi|358333862|dbj|GAA32436.2| flap endonuclease-1 [Clonorchis sinensis]
Length = 350
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE-KLPS---ALKMPLAKFTDAKF 255
AG V TED D L FG ++ L S +E LPS L++ + +F D
Sbjct: 133 AGKVYAVGTEDMDALAFGCPVLLRHLTFSEARKLPIQEFNLPSVLAGLELSMDQFVD--- 189
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G KKA D +
Sbjct: 190 --LCILLGCDYVDTIRGIGPKKAIDLL 214
>gi|410924704|ref|XP_003975821.1| PREDICTED: probable flap endonuclease 1 homolog [Takifugu rubripes]
Length = 297
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDL--SGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
G D V +ED D L FGA +I +L+ G KL L++ +F D +
Sbjct: 139 GTVDAVASEDMDTLPFGASILIRQLNSKKDGEVIEYSLSKLLERLQINHQEFVD-----L 193
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CIL GCDY I G+G K+A
Sbjct: 194 CILLGCDYCEKICGLGPKRA 213
>gi|356927843|gb|AET42633.1| flap endonuclease-1 [Emiliania huxleyi virus 202]
Length = 358
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS---ALKMPLAKF--TDAK 254
AG A TED D L FG+ +I ++ + D++K P+ +L L T +
Sbjct: 167 AGKAYATATEDMDSLTFGSTHVIRHINST------DQKKQPTVEYSLPNILNDMGITMDQ 220
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G +A
Sbjct: 221 FIEICILSGCDYTKTIKGIGPTRA 244
>gi|357132761|ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brachypodium distachyon]
Length = 380
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 23/80 (28%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPRFVRHL--------MD----PSSRKIPIMEFEVAKILEELEFTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMG 274
F +CIL GCDY IKG+G
Sbjct: 224 FIDLCILCGCDYCDSIKGIG 243
>gi|340503093|gb|EGR29715.1| hypothetical protein IMG5_150060 [Ichthyophthirius multifiliis]
Length = 138
Score = 44.3 bits (103), Expect = 0.12, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 21 YVNYCMKYINMLLAHKIK-VIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
++ +C+K I +L+ IK +++VFDG LP+KE TE+ R+ E +Q+A +L+ G
Sbjct: 8 HIEFCIKRIEDILSFGIKKIVLVFDGHKLPSKEQTEQIRKTNRE-EARQEALKLMEEG 64
>gi|156839544|ref|XP_001643462.1| hypothetical protein Kpol_483p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114073|gb|EDO15604.1| hypothetical protein Kpol_483p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 397
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 199 IAGYADYVITEDSDLLVFGAKKII-----YKLDL--SGNCCFM---DREKLPSALKMPLA 248
+ GY D+V+T DSD L FG K++ Y DL SGN RE + + M
Sbjct: 187 VNGYVDFVLTNDSDSLFFGCTKLLRNYSKYTQDLGSSGNSPIKKPDSRESFVTIVDMEKI 246
Query: 249 KF-----TDA-KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
+ TD F +L G DY G+KG+G KA + + +PDF
Sbjct: 247 RLLMKVRTDPDSFLLFSVLLGGDYNQGVKGLGKAKAAK-LSQLEEPDF 293
>gi|323457006|gb|EGB12872.1| hypothetical protein AURANDRAFT_19112 [Aureococcus anophagefferens]
Length = 396
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK------FTDA 253
G A V TED D L FG+ + + N F + K L++ A ++A
Sbjct: 175 GGKAHAVGTEDMDALTFGSTRQLR------NMTFTKKSKDDKVLEITHAAVLEGLGLSNA 228
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKA 278
+F CIL GCDY + I+G+G K A
Sbjct: 229 EFVDFCILCGCDYTSTIRGVGPKTA 253
>gi|367004070|ref|XP_003686768.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
gi|357525070|emb|CCE64334.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
Length = 1051
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGN-CCFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
D +IT+DSD+ +FG K+ + N F D++KL L + + D + +L
Sbjct: 826 DGIITDDSDVFLFGGSKVYKNMFHEKNYVEFYDQDKLTVQLGLERSNLID-----LALLL 880
Query: 263 GCDYWTGIKGMG 274
G DY +GIKG+G
Sbjct: 881 GSDYTSGIKGIG 892
>gi|255513611|gb|EET89877.1| XPG I domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 352
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 32/135 (23%)
Query: 166 VKITKEFLTSGAPQPFG--------ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFG 217
+ITKE ++S A + G A +EG + S + + IA YA ++D D L+FG
Sbjct: 128 TRITKEIVSS-AKELLGYMGIWYINAPSEGEAQASYMCSKGIA-YA--AASQDYDTLLFG 183
Query: 218 AKKIIYKLDLSGNCCFMDREKLPSA------------LKMPLAKF--TDAKFRYMCILSG 263
+KK++ L LSG R KLP L L T K ++ IL G
Sbjct: 184 SKKVVRNLTLSG------RRKLPGKNVFVNVNPEMVDLDATLGSLGITRQKLIWIGILLG 237
Query: 264 CDYWTGIKGMGLKKA 278
D+ G+KG+G K A
Sbjct: 238 TDFNDGVKGVGPKTA 252
>gi|357117977|ref|XP_003560737.1| PREDICTED: exonuclease 1-like [Brachypodium distachyon]
Length = 220
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR 58
Y++Y M +IN+L HK+ ++VFDG +P K AT++DR
Sbjct: 58 YISYFMHHINLLRHHKVVPVVVFDGCSMPCKSATDKDR 95
>gi|170096514|ref|XP_001879477.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645845|gb|EDR10092.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 127
Score = 44.3 bits (103), Expect = 0.13, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAE 63
H YV+Y M + +L H I+ ++FDG LPAK+ TE +R+ R E
Sbjct: 20 HKYVDYAMHCMRLLQYHNIQPYIIFDGGPLPAKKNTEPNRKWRRE 64
>gi|304313993|ref|YP_003849140.1| flap structure-specific endonuclease [Methanothermobacter
marburgensis str. Marburg]
gi|302587452|gb|ADL57827.1| flap structure-specific endonuclease [Methanothermobacter
marburgensis str. Marburg]
Length = 328
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 242
A EG + S + R G A V ++D D L+FGA +++ L LSG + +L SA
Sbjct: 149 APGEGEAQASFIVRR---GDAWAVASQDYDCLLFGAPRVVRNLTLSGKLEEPEIIELESA 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLK------KAKDYVFSIMD 287
L+ T + + +L G D+ GIKG+G + K K VFS+++
Sbjct: 206 LRN--LSITHEQLVDLALLVGTDFNDGIKGIGARRGLKLIKEKGDVFSVIE 254
>gi|167536429|ref|XP_001749886.1| hypothetical protein [Monosiga brevicollis MX1]
gi|317374912|sp|A9VB27.1|FEN1_MONBE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|163771601|gb|EDQ85265.1| predicted protein [Monosiga brevicollis MX1]
Length = 368
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 19/79 (24%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP--------SALKMPLAKFTDAKFRYMC 259
TED D L FG ++ + F + K+P L+M + +F D MC
Sbjct: 177 TEDMDALTFGTTVLLRHM------TFSEARKMPIQEFRLQKGGLEMSMEEFID-----MC 225
Query: 260 ILSGCDYWTGIKGMGLKKA 278
IL GCDY IKG+G +KA
Sbjct: 226 ILLGCDYCDSIKGIGRQKA 244
>gi|448546419|ref|ZP_21626583.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|448548406|ref|ZP_21627673.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
gi|448557600|ref|ZP_21632789.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445702872|gb|ELZ54812.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|445714157|gb|ELZ65924.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445714501|gb|ELZ66263.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
Length = 326
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYM 258
G ADYV +ED D L+FGA + +L GN MD L L K T + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMD-------LDATLDKHGITHEQLVDI 218
Query: 259 CILSGCDYWTGIKGMGLKKA 278
+L G D+ GI G+G K A
Sbjct: 219 AMLCGTDFNEGITGIGPKTA 238
>gi|448568151|ref|ZP_21637728.1| flap endonuclease-1 [Haloferax lucentense DSM 14919]
gi|445727101|gb|ELZ78715.1| flap endonuclease-1 [Haloferax lucentense DSM 14919]
Length = 326
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYM 258
G ADYV +ED D L+FGA + +L GN MD L L K T + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMD-------LDATLDKHDITHEQLVDI 218
Query: 259 CILSGCDYWTGIKGMGLKKA 278
+L G D+ GI G+G K A
Sbjct: 219 AMLCGTDFNEGITGIGPKTA 238
>gi|29467052|dbj|BAC66965.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|37496995|dbj|BAC98428.1| flap endonuclease-1b [Oryza sativa Japonica Group]
Length = 412
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 206 VITEDSDLLVFGAKKIIYKL-DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL 261
+ +ED D L FGA++ + L DLS + K+ L + + +F D +CIL
Sbjct: 176 IASEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFID-----LCIL 230
Query: 262 SGCDYWTGIKGMGLKKA 278
SGCDY I+G+G ++A
Sbjct: 231 SGCDYCENIRGIGGQRA 247
>gi|288931681|ref|YP_003435741.1| flap structure-specific endonuclease [Ferroglobus placidus DSM
10642]
gi|288893929|gb|ADC65466.1| flap structure-specific endonuclease [Ferroglobus placidus DSM
10642]
Length = 336
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA------------LKMPLA 248
G ADY ++D D L+FG+ K+ L ++G + KLP L+ L
Sbjct: 162 GDADYTGSQDYDSLLFGSPKLARNLTVTG------KRKLPGKNVYVEIKPEIIDLEANLK 215
Query: 249 KF--TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMD 287
K T + + IL G DY G+KG+G KKA YV + D
Sbjct: 216 KLGITREQLIDVAILVGTDYNEGVKGIGAKKALKYVKTYGD 256
>gi|448622799|ref|ZP_21669448.1| flap endonuclease-1 [Haloferax denitrificans ATCC 35960]
gi|445753307|gb|EMA04724.1| flap endonuclease-1 [Haloferax denitrificans ATCC 35960]
Length = 326
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYM 258
G ADYV +ED D L+FGA + +L GN MD L L K T + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMD-------LDATLDKHDITHEQLVDI 218
Query: 259 CILSGCDYWTGIKGMGLKKA 278
+L G D+ GI G+G K A
Sbjct: 219 AMLCGTDFNEGITGIGPKTA 238
>gi|292656986|ref|YP_003536883.1| DNA repair flap endonuclease Fen1 [Haloferax volcanii DS2]
gi|448293584|ref|ZP_21483689.1| flap endonuclease-1 [Haloferax volcanii DS2]
gi|291370541|gb|ADE02768.1| DNA repair flap endonuclease Fen1 [Haloferax volcanii DS2]
gi|445570445|gb|ELY25008.1| flap endonuclease-1 [Haloferax volcanii DS2]
Length = 326
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD + + + D + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMDLDATLDKHDITYEQLVD-----IAM 220
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 221 LCGTDFNEGITGIGPKTA 238
>gi|448600910|ref|ZP_21656289.1| flap endonuclease-1 [Haloferax alexandrinus JCM 10717]
gi|445734923|gb|ELZ86479.1| flap endonuclease-1 [Haloferax alexandrinus JCM 10717]
Length = 326
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYM 258
G ADYV +ED D L+FGA + +L GN MD L L K T + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMD-------LDATLDKHDITHEQLVDI 218
Query: 259 CILSGCDYWTGIKGMGLKKA 278
+L G D+ GI G+G K A
Sbjct: 219 AMLCGTDFNEGITGIGPKTA 238
>gi|115456427|ref|NP_001051814.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|62510683|sp|Q75LI2.1|FEN12_ORYSJ RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B; AltName:
Full=OsFEN-1b
gi|317374867|sp|B8AMS4.1|FEN12_ORYSI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|40714676|gb|AAR88582.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|108711942|gb|ABF99737.1| Flap endonuclease-1b, putative, expressed [Oryza sativa Japonica
Group]
gi|113550285|dbj|BAF13728.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|215692762|dbj|BAG88230.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194043|gb|EEC76470.1| hypothetical protein OsI_14202 [Oryza sativa Indica Group]
gi|222626117|gb|EEE60249.1| hypothetical protein OsJ_13256 [Oryza sativa Japonica Group]
Length = 412
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 206 VITEDSDLLVFGAKKIIYKL-DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL 261
+ +ED D L FGA++ + L DLS + K+ L + + +F D +CIL
Sbjct: 176 IASEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFID-----LCIL 230
Query: 262 SGCDYWTGIKGMGLKKA 278
SGCDY I+G+G ++A
Sbjct: 231 SGCDYCENIRGIGGQRA 247
>gi|253744402|gb|EET00616.1| Flap structure-specific endonuclease [Giardia intestinalis ATCC
50581]
Length = 361
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRY 257
AG + V + D D+L FG+ +I L G D+E + L L + F+ +F
Sbjct: 170 AGLCEGVASSDLDVLAFGSPSLIRNLAQGG-----DKEIMEINLDTVLNELGFSYDEFLD 224
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY ++G+G K A
Sbjct: 225 LCILCGCDYANSLEGIGPKTA 245
>gi|19113794|ref|NP_592882.1| Fen1 family nuclease, XP-G family (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175380|sp|Q09708.1|YAGG_SCHPO RecName: Full=Uncharacterized protein C12G12.16c
gi|929887|emb|CAA90586.1| Fen1 family nuclease, XP-G family (predicted) [Schizosaccharomyces
pombe]
Length = 496
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 180 PFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN----CCFMD 235
P G E + SA+++ N+A YA V T+D+D+L+ G+ I LDL+ N MD
Sbjct: 296 PIGV--EAEAFASAISQNNLA-YA--VATQDTDVLLLGSSMISNFLDLNDNFHLPLQIMD 350
Query: 236 REKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
K+ L + F D C++ G D+ + I +G +A
Sbjct: 351 PRKIAQELNLTFDGFQD-----YCLMCGTDFTSRIPKIGPVRA 388
>gi|410909029|ref|XP_003967993.1| PREDICTED: flap endonuclease 1-like [Takifugu rubripes]
Length = 380
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVFATATEDMDGLTFGTNVLLRHLTAS------------EAKKLPIQEFHFSRVLQET 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T+ +F +CIL GCDY IKG+G K+A D +
Sbjct: 217 GLTNEQFIDLCILLGCDYCGTIKGIGPKRAIDLI 250
>gi|440296320|gb|ELP89147.1| hypothetical protein EIN_485090 [Entamoeba invadens IP1]
Length = 688
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
DYV + DSD+ VFGAK +I + G + A T K+ ++ +L G
Sbjct: 500 DYVASNDSDVFVFGAKNVIRNFLIDGEVA-----------TIHTANLTQEKYIFLALLLG 548
Query: 264 CDYWTGIKGMGLKKA 278
D+ G+ +G K+A
Sbjct: 549 SDFTEGVGKVGPKRA 563
>gi|433418201|ref|ZP_20404929.1| flap endonuclease-1 [Haloferax sp. BAB2207]
gi|432199801|gb|ELK55943.1| flap endonuclease-1 [Haloferax sp. BAB2207]
Length = 326
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYM 258
G ADYV +ED D L+FGA + +L GN MD L L K T + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMD-------LDATLDKHDITHEQLVDI 218
Query: 259 CILSGCDYWTGIKGMGLKKA 278
+L G D+ GI G+G K A
Sbjct: 219 AMLCGTDFNEGITGIGPKTA 238
>gi|448592407|ref|ZP_21651514.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
gi|445731412|gb|ELZ82996.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
Length = 326
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD + + + D + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMDLDATLDKHDITWEQLVD-----IAM 220
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 221 LCGTDFNEGISGVGPKTA 238
>gi|320165003|gb|EFW41902.1| flap endonuclease 1-B [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 21/81 (25%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRY 257
TED D L FG+K ++ L F + K+P LK+ + +F D
Sbjct: 177 TEDMDALTFGSKVLLRHL------TFSEARKMPIKEFNLDRALEGLKLTMEQFVD----- 225
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY IKG+G +A
Sbjct: 226 LCILLGCDYCESIKGIGPTRA 246
>gi|449435964|ref|XP_004135764.1| PREDICTED: flap endonuclease 1-like [Cucumis sativus]
Length = 377
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 23/80 (28%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FG+ + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGSPRFLRHL--------MD----PSSRKIPVMEFEVAKILEELNLTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY I+G+G
Sbjct: 224 FIDLCILSGCDYCDNIRGIG 243
>gi|440491836|gb|ELQ74443.1| 5'-3' exonuclease [Trachipleistophora hominis]
Length = 335
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 242
+ NE + +A+ + G DYV TED D L F A ++ K + + +++
Sbjct: 152 SENEAEAFCAALCRK---GIVDYVCTEDMDALCFRAP-VLLKNFVKDSVAEYRLDEILRD 207
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 279
+K+ +F D +CIL GCDY IKG+G KA+
Sbjct: 208 MKLEFDEFVD-----LCILLGCDYAGTIKGIGPMKAE 239
>gi|391334775|ref|XP_003741776.1| PREDICTED: flap endonuclease 1-like [Metaseiulus occidentalis]
Length = 379
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP-SALKMP--LAK--FTDAKFRYMCILS 262
TED D L FGA ++ + F + K+P +P LA+ FT +F +CIL
Sbjct: 177 TEDMDCLTFGASVLLRHM------TFSEARKMPIKEFNLPKILAELNFTQREFIDLCILL 230
Query: 263 GCDYWTGIKGMGLKKA 278
GCDY IKG+G K+A
Sbjct: 231 GCDYCGTIKGIGPKRA 246
>gi|449510827|ref|XP_004163772.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Cucumis
sativus]
Length = 382
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 23/80 (28%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FG+ + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGSPRFLRHL--------MD----PSSRKIPVMEFEVAKILEELNLTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMG 274
F +CILSGCDY I+G+G
Sbjct: 224 FIDLCILSGCDYCDNIRGIG 243
>gi|448578528|ref|ZP_21643963.1| flap endonuclease-1 [Haloferax larsenii JCM 13917]
gi|445727069|gb|ELZ78685.1| flap endonuclease-1 [Haloferax larsenii JCM 13917]
Length = 326
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD + + + D + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMDLDATLDKHDITWEQLVD-----IAM 220
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 221 LCGTDFNEGISGVGPKTA 238
>gi|448612021|ref|ZP_21662451.1| flap endonuclease-1 [Haloferax mucosum ATCC BAA-1512]
gi|445742782|gb|ELZ94276.1| flap endonuclease-1 [Haloferax mucosum ATCC BAA-1512]
Length = 326
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD + + + + D + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMDLDATLAKHDISWEQLID-----IAM 220
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 221 LCGTDFNEGITGVGPKTA 238
>gi|58390636|ref|XP_317855.2| AGAP011448-PA [Anopheles gambiae str. PEST]
gi|74802123|sp|Q7Q323.2|FEN1_ANOGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55237026|gb|EAA13029.2| AGAP011448-PA [Anopheles gambiae str. PEST]
Length = 383
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A KMP+ +F
Sbjct: 169 AGKVYATATEDMDALTFGSNILLRHLTFS------------EARKMPVQEFAYEKVLKGF 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKA 278
T +F +CIL GCDY I+G+G KKA
Sbjct: 217 ELTQDEFIDLCILLGCDYCDTIRGIGPKKA 246
>gi|443720454|gb|ELU10206.1| hypothetical protein CAPTEDRAFT_21886 [Capitella teleta]
Length = 377
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
G+ TED D L FG+ ++ L S A KMP+ +F+ K
Sbjct: 169 GGHVYATGTEDMDALTFGSTVLLRHLTFS------------EARKMPIKEFSLEKVLAGL 216
Query: 255 ------FRYMCILSGCDYWTGIKGMGLKKAKDYV 282
F +CIL GCDY I+G+G K+A D +
Sbjct: 217 ELSYEEFIDLCILLGCDYCDSIRGIGPKRAVDLI 250
>gi|300706556|ref|XP_002995534.1| hypothetical protein NCER_101536 [Nosema ceranae BRL01]
gi|239604679|gb|EEQ81863.1| hypothetical protein NCER_101536 [Nosema ceranae BRL01]
Length = 563
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKFRY 257
+G D VITEDSD+L+ G ++YK N D +K+ + + L +
Sbjct: 423 SGVVDGVITEDSDILLHGG--VVYKNFFRKNKYITKYDPKKIYEVMGLSLNDLISLGY-- 478
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFEN 292
+ G DY GIKG+G+KKA +Y+ S DF+N
Sbjct: 479 ---ILGSDYTVGIKGIGIKKAVEYIKS---EDFKN 507
>gi|348540973|ref|XP_003457961.1| PREDICTED: flap endonuclease 1-like [Oreochromis niloticus]
Length = 380
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVFATATEDMDGLTFGTNILLRHLTAS------------EAKKLPIQEFHFSRILQDI 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T+ +F +CIL GCDY IKG+G K+A D +
Sbjct: 217 GLTNEQFIDLCILLGCDYCGTIKGIGPKRAIDLI 250
>gi|281212257|gb|EFA86417.1| xeroderma pigmentosum group G family protein [Polysphondylium
pallidum PN500]
Length = 1515
Score = 43.9 bits (102), Expect = 0.18, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 201 GYADYVITEDSDLLVFG--AKKIIYK--LDLSGNCCFMDREKLPSALKMPLAKFTDAKFR 256
G D V+TEDSD L+FG + ++Y+ C D EK + L
Sbjct: 1035 GLIDGVVTEDSDTLLFGKSSDMVVYRHLFQQPEKYCMSDIEKTIGVNRDDLIN------- 1087
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAK 301
+ +L GCDY G+KG+G+ A + + +F+ +E+ K+ +
Sbjct: 1088 -LAMLLGCDYTAGVKGIGIVNAMEII-----SEFDTLEEFAKFIR 1126
>gi|110766831|ref|XP_395769.3| PREDICTED: flap endonuclease 1 [Apis mellifera]
Length = 379
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG TED D L FG ++ +L S A KMP+ +F K
Sbjct: 169 AGKVFATATEDMDALTFGCNILLRRLTFS------------EARKMPVQEFHQDKVLEGL 216
Query: 255 ------FRYMCILSGCDYWTGIKGMGLKKA 278
F +CI+ GCDY IKG+G K+A
Sbjct: 217 ELSHDEFIDLCIMLGCDYTNSIKGVGPKRA 246
>gi|339253602|ref|XP_003372024.1| flap endonuclease 1a [Trichinella spiralis]
gi|316967624|gb|EFV52031.1| flap endonuclease 1a [Trichinella spiralis]
Length = 381
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FG+ ++ L S A KMP+ +F T +F
Sbjct: 187 TEDMDTLTFGSDIMLRYLTFS------------EAKKMPIKEFRFDDVLHGLNMTHEEFV 234
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
CIL GCDY IKG+G KKA D +
Sbjct: 235 DFCILLGCDYCPTIKGVGPKKAYDLI 260
>gi|221053197|ref|XP_002257973.1| DNA repair endonuclease [Plasmodium knowlesi strain H]
gi|193807805|emb|CAQ38510.1| DNA repair endonuclease, putative [Plasmodium knowlesi strain H]
Length = 1431
Score = 43.9 bits (102), Expect = 0.18, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK----FTDA 253
N Y D +I++DSD+LVF K +I F +++K + L +
Sbjct: 1133 NCKNYCDAIISDDSDVLVFNGKTVIKN--------FFNKKKTVEVYERKLIEDKLGLYQD 1184
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKE 295
+ + +L GCDY G+ G+G+ A + + + P FE+ K+
Sbjct: 1185 ELINLSLLCGCDYTIGVHGVGIVNALEIIKAF--PTFEDLKK 1224
>gi|124512040|ref|XP_001349153.1| exonuclease I, putative [Plasmodium falciparum 3D7]
gi|23498921|emb|CAD50999.1| exonuclease I, putative [Plasmodium falciparum 3D7]
Length = 1347
Score = 43.9 bits (102), Expect = 0.18, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 80/211 (37%), Gaps = 69/211 (32%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSSI 80
Y+N+ K + + H IKV+ VFDG LP K +K IR +
Sbjct: 55 YLNFIEKMLVPIYNHNIKVVFVFDGEELPEK-------KKENMIRKNR------------ 95
Query: 81 IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDY 140
REK L+ ++K + + M +L C I+ + + K
Sbjct: 96 --------------REKAKMELQEIISKVKNPRTNEM-VLKKC-----IQAISVSK---- 131
Query: 141 VFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIA 200
I+D + RK N+ I Y E + LS +
Sbjct: 132 --EIID-SVKEFCRKKNIDYIISPY--------------------EADAQLSYLCR---M 165
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC 231
G+ I+EDSDLLV+G +++YKL +G C
Sbjct: 166 GFISCAISEDSDLLVYGCPRVLYKLKNTGEC 196
>gi|389848285|ref|YP_006350524.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|448618490|ref|ZP_21666727.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|388245591|gb|AFK20537.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|445746861|gb|ELZ98319.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
Length = 326
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G ADYV +ED D L+FGA + +L GN MD + + + D + +
Sbjct: 166 GDADYVGSEDYDTLLFGAPYTLRQLTSKGNPELMDLDATLEKHDISWEQLVD-----IAM 220
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ GI G+G K A
Sbjct: 221 LCGTDFNEGITGVGPKTA 238
>gi|383859686|ref|XP_003705323.1| PREDICTED: flap endonuclease 1-like [Megachile rotundata]
Length = 383
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG TED D L FG ++ +L S A KMP+ +F K
Sbjct: 169 AGKVFATATEDMDALTFGCNVLLRRLTFS------------EARKMPVQEFHHDKVLEGL 216
Query: 255 ------FRYMCILSGCDYWTGIKGMGLKKAKDYV 282
F +CI+ GCDY IKG+G K+A + +
Sbjct: 217 GLNQDEFIDLCIMLGCDYTNSIKGVGPKRAMELI 250
>gi|255717633|ref|XP_002555097.1| KLTH0G01298p [Lachancea thermotolerans]
gi|238936481|emb|CAR24660.1| KLTH0G01298p [Lachancea thermotolerans CBS 6340]
Length = 675
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 26/108 (24%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK----------- 249
G DYV++ DSD LVFGA +++ F E +P+ PL K
Sbjct: 184 GLVDYVLSNDSDTLVFGATRVLRNFSR-----FW--EDVPATYTGPLKKKDHKEMFITVV 236
Query: 250 -------FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF 290
+ + C L G DY GI+G+G KKA + P+F
Sbjct: 237 DMQQIRNWNRSSLVLYCTLLGADYNQGIRGLGSKKAAKLA-QLTTPNF 283
>gi|242014497|ref|XP_002427926.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
gi|212512410|gb|EEB15188.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
Length = 380
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA---LKMPLAKF--TDAK 254
AG TED D L FG+ I+ L F + K+P L LA+ T +
Sbjct: 169 AGKVYATATEDMDALTFGSNIILRHL------TFSEARKMPVQEIYLDKVLAELEMTQNE 222
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G K+A
Sbjct: 223 FIDLCILLGCDYCDSIKGIGPKRA 246
>gi|242091235|ref|XP_002441450.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
gi|317374865|sp|C5YUK3.1|FEN11_SORBI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|241946735|gb|EES19880.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
Length = 380
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPRFLRHL--------MD----PSSKKIPVMEFDVAKVLEELELTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G + A
Sbjct: 224 FIDLCILCGCDYCDSIKGIGGQTA 247
>gi|317374910|sp|B4FHY0.1|FEN1_MAIZE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194695278|gb|ACF81723.1| unknown [Zea mays]
Length = 379
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPRFLRHL--------MD----PSSKKIPVMEFDVAKVLEELELTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G + A
Sbjct: 224 FIDLCILCGCDYCDSIKGIGGQTA 247
>gi|407034393|gb|EKE37191.1| flap nuclease, putative [Entamoeba nuttalli P19]
Length = 376
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
AG TED D L G++ ++ K S N RE S++ + FT +F +C
Sbjct: 170 AGKCYATATEDMDALTLGSEHVVRKFSASDNKKDPIREYSLSSI-LEETGFTMEQFIDLC 228
Query: 260 ILSGCDYWTGIKGMG 274
IL GCDY IKG+G
Sbjct: 229 ILLGCDYCETIKGVG 243
>gi|303270955|ref|XP_003054839.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462813|gb|EEH60091.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 237
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCC-FMDREKLPSALKMPLAKFTDAKFRYMC 259
G+ D VIT+DSD +FGAK I + S F D ++ + L + AK +
Sbjct: 34 GFVDAVITDDSDAFLFGAKTIYRNVFESKKYVEFYDANRVDADLGLDRAKMA-----QLA 88
Query: 260 ILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKY 299
+L G DY G+ G+G+ A + V + P E ++ ++
Sbjct: 89 LLLGSDYTEGVTGVGIVNALEVVLNF--PGVEGLTKFAEW 126
>gi|380015033|ref|XP_003691516.1| PREDICTED: flap endonuclease 1-like [Apis florea]
Length = 383
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----- 254
AG TED D L FG ++ +L S A KMP+ +F K
Sbjct: 169 AGKVFATATEDMDALTFGCNILLRRLTFS------------EARKMPVQEFHQDKVLEGL 216
Query: 255 ------FRYMCILSGCDYWTGIKGMGLKKA 278
F +CI+ GCDY IKG+G K+A
Sbjct: 217 ELSHDEFIDLCIMLGCDYTNSIKGVGPKRA 246
>gi|350416440|ref|XP_003490949.1| PREDICTED: flap endonuclease 1-like [Bombus impatiens]
Length = 381
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ +L S A KMP+ +F
Sbjct: 169 AGKVFATATEDMDALTFGCNVLLRRLTFS------------EARKMPVQEFHFDKVLKDL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F +CI+ GCDY + IKG+G K+A
Sbjct: 217 GLNHDEFIDLCIMLGCDYTSSIKGVGPKRA 246
>gi|401409161|ref|XP_003884029.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
gi|325118446|emb|CBZ53997.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
Length = 1924
Score = 43.5 bits (101), Expect = 0.21, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 22/107 (20%)
Query: 180 PF-GARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK 238
PF A E + + T +N+A D VI++DSD LVFGA++I F + +K
Sbjct: 1445 PFVTAPGEAEATAAYFTAQNLA---DAVISDDSDALVFGAREIYRN--------FFENKK 1493
Query: 239 LPSALKMPLAKFTDAKFR-------YMCILSGCDYWTGIKGMGLKKA 278
+++M A F K + +L GCDY G+KG+G+ A
Sbjct: 1494 ---SVEMYEASFIAHKLGLDQQQLILLAMLLGCDYTLGVKGIGIVNA 1537
>gi|448431107|ref|ZP_21584935.1| flap endonuclease-1 [Halorubrum tebenquichense DSM 14210]
gi|445688254|gb|ELZ40519.1| flap endonuclease-1 [Halorubrum tebenquichense DSM 14210]
Length = 325
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G AD+ +ED D L+FGA + +L G+ MD S L + DA +
Sbjct: 166 GTADHAGSEDYDALLFGAPTTLRQLTSKGDPELMDLAATLSDLDLDRQGLVDA-----AM 220
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G D+ G++G+G K A
Sbjct: 221 LCGTDFNEGVRGIGPKTA 238
>gi|209878979|ref|XP_002140930.1| DNA-repair protein UVH3 [Cryptosporidium muris RN66]
gi|209556536|gb|EEA06581.1| DNA-repair protein UVH3, putative [Cryptosporidium muris RN66]
Length = 1017
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 137 AKDYVFSIMDPDFENALRKINVYGKIGSYVKITKE--FLTSGAPQPFG-----ARNEGRS 189
A D + SI++ + + + K V + + +ITKE F Q FG + E +
Sbjct: 710 ADDNIISILEEEHDKIMSKFQVQRRY-TNAEITKEIQFQVRMLLQAFGIPWIDSPGEAEA 768
Query: 190 LLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK 249
S +T+ G D V+++DSD ++FGA K +Y+ G + +K+ +
Sbjct: 769 QASILTQ---LGLCDGVLSDDSDCILFGA-KCVYRNFFCGTT-------VEKYVKVDIEN 817
Query: 250 FTDAK-FRYMCILS---GCDYWTGIKGMG 274
F K MCIL+ GCDY G+ G+G
Sbjct: 818 FLGIKNHDQMCILALLLGCDYTVGVSGVG 846
>gi|441432364|ref|YP_007354406.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
moumouvirus]
gi|440383444|gb|AGC01970.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
moumouvirus]
Length = 431
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 189 SLLSAVTERNIAGYADYVITEDSDLLVFGA----KKIIYKLDLSGNCCFMDREKLPSALK 244
S L+A + N Y V ++DSD+L GA K ++ + + + K +
Sbjct: 164 SWLAARRDENGDRYVKGVCSDDSDMLALGAPYLFKDMLKFMSKNKEVTIISLNKTLTKTG 223
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ + +FTD +C+L GCDY IKG+G K A
Sbjct: 224 LTMRQFTD-----LCVLLGCDYCDNIKGIGPKTA 252
>gi|413946273|gb|AFW78922.1| flap endonuclease 1a [Zea mays]
Length = 523
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 320 VASEDMDSLTFGAPRFLRHL--------MD----PSSKKIPVMEFDVAKVLEELELTMDQ 367
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G + A
Sbjct: 368 FIDLCILCGCDYCDSIKGIGGQTA 391
>gi|195629924|gb|ACG36603.1| flap endonuclease 1a [Zea mays]
Length = 379
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK----------- 254
V +ED D L FGA + + L MD PS+ K+P+ +F AK
Sbjct: 176 VASEDMDSLTFGAPRXLRHL--------MD----PSSKKIPVMEFDVAKVLEELELTMDQ 223
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G + A
Sbjct: 224 FIDLCILCGCDYCDSIKGIGGQTA 247
>gi|198417766|ref|XP_002129714.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 380
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L F + +++ L S A KMP+ +F T +F
Sbjct: 177 TEDMDALTFHSSRLLRHLTFS------------EARKMPIQEFVYEKVLEEMEMTHEQFV 224
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G K+A D +
Sbjct: 225 DLCILLGCDYCEHIRGVGPKRAYDLI 250
>gi|405964237|gb|EKC29743.1| Flap endonuclease GEN-like protein 1 [Crassostrea gigas]
Length = 417
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G D V+T DSD L++GA+ Y +DL +R L M T M +
Sbjct: 77 GLVDGVLTSDSDALLYGARTFDYAVDLYEMSVIEER------LGM-----TRETLVAMAM 125
Query: 261 LSGCDYWTGIKGMGLKKAKD 280
L GCDY GI+ +G++KA++
Sbjct: 126 LVGCDYDEGIRDIGIEKAQE 145
>gi|403222552|dbj|BAM40684.1| 5'-3' exonuclease [Theileria orientalis strain Shintoku]
Length = 824
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 205 YVITEDSDLLVFGAKKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
+V +ED+D L FG ++ + S N +D +K L + +F D CIL
Sbjct: 176 FVASEDTDTLAFGGGYLLRNVTASSNKKIVKVDLQKALKGLDLTFEQFVD-----FCILC 230
Query: 263 GCDYWTGIKGMGLKKA 278
GCDY ++G+G K A
Sbjct: 231 GCDYCDTLEGVGPKTA 246
>gi|255552654|ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3, putative [Ricinus communis]
Length = 1641
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 255
+A D V+T+DSD+ +FGA+ + + F DR+ + + + + T K
Sbjct: 997 LANLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYVETYFMKDIERELGLTREKL 1049
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYV 297
M +L G DY GI G+G+ A + V + + D E +E++
Sbjct: 1050 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLEKFREWI 1092
>gi|451927433|gb|AGF85311.1| endonuclease of the XPG family [Moumouvirus goulette]
Length = 431
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 189 SLLSAVTERNIAGYADYVITEDSDLLVFGA----KKIIYKLDLSGNCCFMDREKLPSALK 244
S L+A + N Y V ++DSD+L GA K ++ + + + K +
Sbjct: 164 SWLAARRDENGKRYVKGVCSDDSDMLALGAPYLFKDMLKFMSKNKEVTIISLNKTLTKTG 223
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ + +FTD +C+L GCDY IKG+G K A
Sbjct: 224 LTMRQFTD-----LCVLLGCDYCDNIKGVGPKTA 252
>gi|340717150|ref|XP_003397050.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Bombus
terrestris]
Length = 381
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ +L S A KMP+ +F
Sbjct: 169 AGKVFATATEDMDALTFGCNILLRRLTFS------------EARKMPVQEFHFDKVLEDL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F +CI+ GCDY + IKG+G K+A
Sbjct: 217 GLNHNEFIDLCIMLGCDYTSSIKGVGPKRA 246
>gi|401414008|ref|XP_003886451.1| hypothetical protein NCLIV_068500 [Neospora caninum Liverpool]
gi|325120871|emb|CBZ56426.1| hypothetical protein NCLIV_068500 [Neospora caninum Liverpool]
Length = 620
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 37/158 (23%)
Query: 19 HLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG- 77
H + +C+ I +L + I+ +VF+G L AK E RR E RH +A +G
Sbjct: 102 HQILRFCLGKIRLLTSFGIRPFLVFEGGQLEAKAPANESRRLTRE-RHAVQAVAAHRAGD 160
Query: 78 ---------SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF-------------- 114
+I L L N F + P + + A DA+
Sbjct: 161 VGSARRHAVGAISVSLSLR-NFVFRKLQSSPGVICIAAAYEADAQMARLAADGLVDAVLT 219
Query: 115 -----------RYMCILSGCDYWTGIKGMGLKKAKDYV 141
+ +C+L+GCDY I G+G++ A V
Sbjct: 220 EDGDLLAYQARKLICVLAGCDYAPNIPGVGVRTAARLV 257
>gi|284162570|ref|YP_003401193.1| XPG I domain-containing protein [Archaeoglobus profundus DSM 5631]
gi|284012567|gb|ADB58520.1| XPG I domain protein [Archaeoglobus profundus DSM 5631]
Length = 335
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 34/127 (26%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA------------LKMPLA 248
G ADY ++D D L+FG+ ++ L ++G R KLP L+ L
Sbjct: 161 GDADYTGSQDYDSLLFGSPRLARNLAITG------RRKLPGKNVYTEVKPEVIDLEYNLK 214
Query: 249 KF--TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLT 306
K T + + +L G DY G++G+G+KKA YV + Y +F +
Sbjct: 215 KLGITREQLIDIALLVGTDYNEGVEGIGVKKAYKYVKA--------------YGDIFKVL 260
Query: 307 AILDMKV 313
+L +KV
Sbjct: 261 RVLKVKV 267
>gi|389583279|dbj|GAB66014.1| endonuclease, partial [Plasmodium cynomolgi strain B]
Length = 434
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D V+++D D L FGA +I + +++++L + L + +F D CILSG
Sbjct: 305 DIVVSDDMDALAFGAPNLIRFIMNKKKRHIINKDELLNELNINYEQFID-----FCILSG 359
Query: 264 CDYWTGIKGMGLKKA 278
CDY I G+G KA
Sbjct: 360 CDYSAKIPGIGPVKA 374
>gi|357122637|ref|XP_003563021.1| PREDICTED: flap endonuclease 1-B-like [Brachypodium distachyon]
Length = 413
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 197 RNIAGYADYVITEDSDLLVFGAKKIIYKL-DLSGNCCFMDREKLPSALK---MPLAKFTD 252
+N YA V +ED D L FG+ + + + DLS + ++P L+ + + +F D
Sbjct: 169 KNHKAYA--VASEDMDSLTFGSLRFLRHITDLSFKRSPVTEFEVPKVLEELGLTMDQFID 226
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKA 278
+CILSGCDY IKG+G ++A
Sbjct: 227 -----LCILSGCDYCENIKGIGGQRA 247
>gi|124800975|ref|XP_001349570.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
gi|3845138|gb|AAC71842.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
Length = 1516
Score = 43.1 bits (100), Expect = 0.27, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL-----PSALKMPLAKFTD 252
N Y D +I++DSD+LVF K +I F +++K A++ L + +
Sbjct: 1241 NNKNYCDAIISDDSDVLVFSGKTVIKN--------FFNKKKTVEVYEKKAIEEKLGLYQE 1292
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRK 294
+ + +L GCDY G+ G+G+ A + + + P+FE+ K
Sbjct: 1293 -ELINISLLCGCDYTIGVHGIGIVNALEIIKAF--PNFEDLK 1331
>gi|399217224|emb|CCF73911.1| unnamed protein product [Babesia microti strain RI]
Length = 895
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 14/78 (17%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK-----LPSALKMPLAKFTDAKFRYMCI 260
VI++DSD LVFGA +++ F ++++ +K L T K + +
Sbjct: 647 VISDDSDTLVFGAIRVVKN--------FFNKQRNLELYQSQNIKQTLG-LTREKLALIAL 697
Query: 261 LSGCDYWTGIKGMGLKKA 278
L GCDY +G+KG+G+ A
Sbjct: 698 LCGCDYTSGVKGIGIVNA 715
>gi|328865755|gb|EGG14141.1| hypothetical protein DFA_11908 [Dictyostelium fasciculatum]
Length = 1098
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 201 GYADYVITEDSDLLVFGAKK--IIYKLDLSGNCCFMDREK-LPSALKMPLAKFTDAKFRY 257
G+ D V+T+DSD+L+F ++ +Y+ N D +K P +K L
Sbjct: 819 GFVDGVVTDDSDILLFASQPDMAVYR-----NLFQHDPQKYQPKEIKR-LMGLERQDLIS 872
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKY 299
+ +L GCDY G+ G+G+ A + + +FEN +++ KY
Sbjct: 873 LALLLGCDYTPGVHGIGIVNAMEIL-----AEFENLQDFKKY 909
>gi|448678733|ref|ZP_21689740.1| flap endonuclease-1 [Haloarcula argentinensis DSM 12282]
gi|445772720|gb|EMA23765.1| flap endonuclease-1 [Haloarcula argentinensis DSM 12282]
Length = 326
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG S + R G DYV TED D L+FGA + ++ G+ MD +
Sbjct: 154 EGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFAATLERHDL 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA-KDY-----VFSIMDPDFENRKEYVKY 299
+ DA IL G D+ GI G+G K A KD +++++ E R E++ +
Sbjct: 211 SWEQLVDA-----AILMGTDFNEGISGIGPKTAVKDLHEHGDLYAVL----EARGEHIDH 261
Query: 300 AK 301
A
Sbjct: 262 AD 263
>gi|390371157|dbj|GAB65038.1| DNA repair endonuclease [Plasmodium cynomolgi strain B]
Length = 1505
Score = 43.1 bits (100), Expect = 0.28, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 16/103 (15%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA-----LKMPLAKFTD 252
N Y D +I++DSD+LVF K +I F +R+K ++ L + D
Sbjct: 1198 NCKNYCDAIISDDSDVLVFNGKTVIKN--------FFNRKKTVEVYERKHIEDKLGLYQD 1249
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKE 295
+ + +L GCDY G+ G+G+ A + + + P F++ K+
Sbjct: 1250 -ELINLSLLCGCDYTIGVHGVGIVNALEIIKAF--PTFDDLKK 1289
>gi|320202935|ref|NP_001188509.1| flap endonuclease-1 [Bombyx mori]
gi|268044461|gb|ACY92094.1| flap endonuclease-1 [Bombyx mori]
Length = 380
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FGA ++ L S A KMP+ +F +F
Sbjct: 177 TEDMDALTFGAPVLLRHLTFS------------EARKMPVQEFHLNNVLQGLELKQNEFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G K+A D +
Sbjct: 225 DLCILLGCDYCGSIRGVGPKRAIDLI 250
>gi|76802527|ref|YP_327535.1| flap endonuclease-1 [Natronomonas pharaonis DSM 2160]
gi|121696716|sp|Q3IPG8.1|FEN_NATPD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|76558392|emb|CAI49983.1| flap endonuclease Fen1 [Natronomonas pharaonis DSM 2160]
Length = 328
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 164 SYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIY 223
+ V+ T+E L A EG + + + R G ADYV +ED D L+ GA +
Sbjct: 134 TIVETTRELLARLDVPVVEAPAEGEAQAAHMARR---GDADYVGSEDYDALLLGAPYTLR 190
Query: 224 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
L +G+ MD E S + DA IL G D+ G+ G+G K A
Sbjct: 191 GLTSNGDPECMDFEATLSTHDLSWEGLVDA-----AILMGTDFNEGLSGVGPKTA 240
>gi|371944946|gb|AEX62767.1| putative endonuclease of the XPG family [Moumouvirus Monve]
Length = 343
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 189 SLLSAVTERNIAGYADYVITEDSDLLVFGA----KKIIYKLDLSGNCCFMDREKLPSALK 244
S L+A + N Y V ++DSD+L GA K ++ + + + K +
Sbjct: 164 SWLAARRDENGDRYVKGVCSDDSDMLALGAPYLFKDMLKFMSKNKEVTIISLNKTLTKTG 223
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ + +FTD +C+L GCDY IKG+G K A
Sbjct: 224 LTMRQFTD-----LCVLLGCDYCDNIKGIGPKTA 252
>gi|156553807|ref|XP_001603401.1| PREDICTED: flap endonuclease 1-like [Nasonia vitripennis]
Length = 381
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 23/82 (28%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK-----------FTDAKFR 256
TED D L FG ++ +L S A KMP+ + T +F
Sbjct: 177 TEDMDALTFGCNVLLRRLTFS------------EARKMPIQEIQYDKVLNGLGLTRDEFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
+CI+ GCDY T IKG+G K+A
Sbjct: 225 DLCIMLGCDYTTSIKGVGPKRA 246
>gi|145546103|ref|XP_001458735.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426556|emb|CAK91338.1| unnamed protein product [Paramecium tetraurelia]
Length = 872
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYK-LDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
G D VITEDSD+ +FGA K++ + + + D + + L + + Y+
Sbjct: 594 GLVDCVITEDSDVFLFGATKVLKGFFESKTSLVYYDTQYIKEDLGLNRDQLI-----YLA 648
Query: 260 ILSGCDYWTGIKGMGLKKAKDYV 282
+ G DY GIKG+G+ A + V
Sbjct: 649 LFLGSDYTLGIKGVGIVNAMEIV 671
>gi|268564494|ref|XP_002639126.1| C. briggsae CBR-CRN-1 protein [Caenorhabditis briggsae]
gi|317374879|sp|A8XL25.1|FEN1_CAEBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 382
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ C + P A K+P+ +F
Sbjct: 169 AGKVYGTATEDMDALTFGS------------CVLLRHLLAPEAKKIPIKEFHLARVLEEM 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY I+G+G KKA + +
Sbjct: 217 QLTKDQFIDLCILLGCDYCGTIRGIGPKKAVELI 250
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 88 GNCCFMDREKLPSALKMPLAKF-----------TDAKFRYMCILSGCDYWTGIKGMGLKK 136
G+C + P A K+P+ +F T +F +CIL GCDY I+G+G KK
Sbjct: 186 GSCVLLRHLLAPEAKKIPIKEFHLARVLEEMQLTKDQFIDLCILLGCDYCGTIRGIGPKK 245
Query: 137 AKDYV 141
A + +
Sbjct: 246 AVELI 250
>gi|157169412|ref|XP_001651504.1| flap endonuclease-1 [Aedes aegypti]
gi|122094730|sp|Q178M1.1|FEN1_AEDAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|108878396|gb|EAT42621.1| AAEL005870-PA [Aedes aegypti]
Length = 380
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FG+ ++ L S A KMP+ +F T +F
Sbjct: 177 TEDMDALTFGSNILLRHLTFS------------EARKMPVQEFNYDKILQGLELTRDEFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G KKA + +
Sbjct: 225 DLCILLGCDYCDSIRGIGPKKAVELI 250
>gi|291242835|ref|XP_002741315.1| PREDICTED: flap endonuclease 1-like [Saccoglossus kowalevskii]
Length = 334
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDR-EKLPSALKMPLAKFTDAKFR 256
N G D V TED D ++GAKK+ L N +D + L K+ L + K
Sbjct: 141 NKEGLVDGVFTEDGDAFLYGAKKVYKNLTAGSNGSHVDVYDMLDIEEKLTLNR---NKLI 197
Query: 257 YMCILSGCDYWT-GIKGMGLKKAKDYVFSIMDPDFENR 293
M +L GCDY + G+ +G A + S+ D D R
Sbjct: 198 AMALLMGCDYLSDGVPSVGKTNATQLMHSLGDIDVLER 235
>gi|11497880|ref|NP_069102.1| flap endonuclease-1 [Archaeoglobus fulgidus DSM 4304]
gi|28380012|sp|O29975.1|FEN_ARCFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|42543625|pdb|1RXV|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543626|pdb|1RXV|B Chain B, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543629|pdb|1RXW|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|2650376|gb|AAB90967.1| DNA repair protein RAD2 (rad2) [Archaeoglobus fulgidus DSM 4304]
Length = 336
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 160 GKIGSYVKITKEFLTSGAPQPF-GARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGA 218
G++ Y+ + + L S PF A +EG + + + + G +Y ++D D L+FG+
Sbjct: 124 GRVDEYIVDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAK---GDVEYTGSQDYDSLLFGS 180
Query: 219 KK------IIYKLDLSGNCCFMDREKLPSALKMPLAKF--TDAKFRYMCILSGCDYWTGI 270
+ I K L G ++D + L+ L + T + + IL G DY G+
Sbjct: 181 PRLARNLAITGKRKLPGKNVYVDVKPEIIILESNLKRLGLTREQLIDIAILVGTDYNEGV 240
Query: 271 KGMGLKKAKDYVFSIMD 287
KG+G+KKA +Y+ + D
Sbjct: 241 KGVGVKKALNYIKTYGD 257
>gi|291239422|ref|XP_002739622.1| PREDICTED: flap structure-specific endonuclease 1-like
[Saccoglossus kowalevskii]
Length = 379
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGN----CCFMDREKLPSALKMPLAKFTDAKF 255
AG TED D L FG+ ++ + S C + + + L++ +F D
Sbjct: 169 AGKVYATATEDMDSLTFGSSTVVRHMTFSEARKMPCQEYNLNNILAELELSQDEFID--- 225
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G K+A D +
Sbjct: 226 --LCILLGCDYCDSIRGIGPKRAIDLI 250
>gi|84994172|ref|XP_951808.1| 5'-3' exonuclease [Theileria annulata strain Ankara]
gi|74952859|sp|Q4UFP0.1|FEN1_THEAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|65301969|emb|CAI74076.1| 5'-3' exonuclease, putative [Theileria annulata]
Length = 506
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 162 IGSYVKITKEFLTS--------GAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDL 213
+G VK+TK+ S G P A E + + + +N+ + V +ED+D
Sbjct: 129 VGRTVKVTKDMNDSAKKLLRLMGIP-VIEALEEAEAQCAYLVTKNLCHF---VASEDTDT 184
Query: 214 LVFGAKKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 271
LVFG ++ + S N +D +K+ L+ +F D CIL GCDY ++
Sbjct: 185 LVFGGWFLLRNVTSSANKKIVKVDLQKVLDGLEFNFDQFVD-----FCILCGCDYCDTLE 239
Query: 272 GMGLKKA 278
G+G K A
Sbjct: 240 GVGPKTA 246
>gi|348560389|ref|XP_003465996.1| PREDICTED: flap endonuclease 1-like [Cavia porcellus]
Length = 380
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRVLQAL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T A+F +CIL G DY I+G+G K+A D +
Sbjct: 217 DLTQAQFVDLCILLGSDYCESIRGIGPKRAVDLI 250
>gi|300120156|emb|CBK19710.2| unnamed protein product [Blastocystis hominis]
Length = 370
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNC-------CFMDREKLPSALKMPLAKFTDAKFRYMCI 260
+ED D L FG +I L S +D ++ A+K+ + +F D +CI
Sbjct: 181 SEDMDSLTFGTPVLIRHLTKSQGAKKDAQSILEVDLAEVLEAMKLSMDEFID-----LCI 235
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
L GCDY GI+G+G KA ++
Sbjct: 236 LCGCDYCDGIRGIGQVKAYQFI 257
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 64 IRHKQKAAELLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGC 123
IRH K+ SI+ ++DL+ ++ A+K+ + +F D +CIL GC
Sbjct: 195 IRHLTKSQGAKKDAQSIL-EVDLA---------EVLEAMKLSMDEFID-----LCILCGC 239
Query: 124 DYWTGIKGMGLKKAKDYV 141
DY GI+G+G KA ++
Sbjct: 240 DYCDGIRGIGQVKAYQFI 257
>gi|409044610|gb|EKM54091.1| hypothetical protein PHACADRAFT_185071 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1025
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 153 LRKINVYGKIGSYVKITKEFLTSGAPQPFG-----ARNEGRSLLSAVTERNIAGYADYVI 207
L++ + GK G++ +T+EF + FG AR E + L+ + N G D +I
Sbjct: 97 LKRGSRVGKSGTH-NLTQEF--KAMIECFGMEWRMARGEAEAELAYL---NAQGIIDAII 150
Query: 208 TEDSDLLVFGAKKIIYK--LDLSGNCCFMDREKLPSALKM-------------PLAKFTD 252
T+D D LVFGA+ +I + L+GN + L P T
Sbjct: 151 TDDVDTLVFGARTVIRNSSITLAGNRNNPATDALGQKSDQHTMVFTSDRIGSHPNIGLTR 210
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKA 278
+ +LSG DY G+KG+G K A
Sbjct: 211 GGMVLIALLSGGDYDNGVKGLGPKIA 236
>gi|393243595|gb|EJD51109.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 645
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 185 NEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK 244
+EG + SA+ AG ADYV +ED+D+LV+ A + +L + ++ AL
Sbjct: 437 HEGEAFASALVH---AGVADYVASEDTDVLVYEAPLLRGLTNLRSPLTVISGSEVREALG 493
Query: 245 MPLAKFTDAKFRYMCILSGCDYWTGIKGMG 274
+ A F D +L G D+ ++G+G
Sbjct: 494 LSRAAFVD-----FALLLGTDFSRRLRGLG 518
>gi|82187497|sp|Q6TNU4.1|FEN1A_DANRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|37362214|gb|AAQ91235.1| flap structure-specific endonuclease 1 [Danio rerio]
gi|47940409|gb|AAH71488.1| Fen1 protein [Danio rerio]
Length = 380
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVYATATEDMDGLTFGTTVLLRHLTAS------------EAKKLPIQEFHFSRILQDM 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY IKG+G K+A D +
Sbjct: 217 ELTHQQFIDLCILLGCDYCGTIKGIGPKRAIDLI 250
>gi|348500556|ref|XP_003437839.1| PREDICTED: probable flap endonuclease 1 homolog [Oreochromis
niloticus]
Length = 348
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYM 258
G V +ED D L FGA +I +L+ + ++ KL L++ +F D +
Sbjct: 139 GTVHAVASEDMDTLPFGANILIRQLNAKKDSEVIEYSLPKLLEKLQIGHKEFVD-----L 193
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CIL GCDY I G+G K+A
Sbjct: 194 CILLGCDYCEKIPGLGPKRA 213
>gi|448651213|ref|ZP_21680282.1| flap endonuclease-1 [Haloarcula californiae ATCC 33799]
gi|445770740|gb|EMA21798.1| flap endonuclease-1 [Haloarcula californiae ATCC 33799]
Length = 326
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG S + R G DYV TED D L+FGA + ++ G+ MD +
Sbjct: 154 EGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFAATLEHHDL 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ DA IL G D+ GI G+G K A
Sbjct: 211 TWEQLVDA-----AILMGTDFNEGISGIGPKTA 238
>gi|74824687|sp|Q9GZ01.1|FEN1_PLAFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|9885425|gb|AAG01445.1| flap endonuclease-1 [Plasmodium falciparum]
Length = 650
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGN---------------CCFMDREKLPSALKMPL 247
A TED+D LVFG K +I L+ + ++ E++ L + +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTM 233
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F D CIL GCDY IKG+G K A
Sbjct: 234 DEFID-----FCILCGCDYCDTIKGIGSKTA 259
>gi|257388818|ref|YP_003178591.1| flap endonuclease-1 [Halomicrobium mukohataei DSM 12286]
gi|257171125|gb|ACV48884.1| XPG I domain protein [Halomicrobium mukohataei DSM 12286]
Length = 326
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG + + + +N+ DYV TED D L+ GA + +L SG+ MD + +
Sbjct: 154 EGEAQAAHMARQNVV---DYVGTEDYDALLLGAPLTLRQLTSSGDPELMDFQATLDHHGI 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ DA IL G D+ GI G+G K A
Sbjct: 211 TWEQLVDA-----AILMGTDFNPGIDGVGPKTA 238
>gi|84996213|ref|XP_952828.1| exonuclease 1 [Theileria annulata strain Ankara]
gi|65303826|emb|CAI76203.1| exonuclease 1, putative [Theileria annulata]
Length = 868
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSG 229
G AD+ I+EDSDL+V+G KIIYKL+ G
Sbjct: 471 TGVADFAISEDSDLIVYGCPKIIYKLNKEG 500
>gi|225543341|ref|NP_001017611.2| probable flap endonuclease 1 homolog [Danio rerio]
gi|317374871|sp|B0UXL7.1|FEN1B_DANRE RecName: Full=Probable flap endonuclease 1 homolog; Short=FEN-1
homolog; AltName: Full=Flap structure-specific
endonuclease 1 homolog
Length = 350
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYM 258
G + V +ED D L FG ++ +L+ + + KL AL++ +F D +
Sbjct: 142 GTVNAVASEDMDTLAFGGTVLLRQLNAKRDSEITEYSLPKLLEALQLKYEEFVD-----L 196
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CIL GCDY I G+G +A
Sbjct: 197 CILLGCDYCDKIGGLGPSRA 216
>gi|71031676|ref|XP_765480.1| flap endonuclease 1 [Theileria parva strain Muguga]
gi|122052062|sp|Q4N3S6.1|FEN1_THEPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|68352436|gb|EAN33197.1| flap endonuclease 1, putative [Theileria parva]
Length = 494
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 162 IGSYVKITKEFLTS--------GAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDL 213
+G VK++KE S G P A E + + + +N+ + V +ED+D
Sbjct: 129 VGRTVKVSKEMNESAKKLLRLMGVP-VIEALEEAEAQCAYLVTKNLCRF---VASEDTDT 184
Query: 214 LVFGAKKIIYKLDLSGNCCFM--DREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIK 271
LVFG ++ + S + + D +K+ L+ +F D CIL GCDY ++
Sbjct: 185 LVFGGAFLLRNVASSSSKKILKVDLQKVLDGLEFNFDQFID-----FCILCGCDYCDTLE 239
Query: 272 GMGLKKA 278
G+G K A
Sbjct: 240 GVGPKTA 246
>gi|448640877|ref|ZP_21677664.1| flap endonuclease-1 [Haloarcula sinaiiensis ATCC 33800]
gi|445761402|gb|EMA12650.1| flap endonuclease-1 [Haloarcula sinaiiensis ATCC 33800]
Length = 326
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG S + R G DYV TED D L+FGA + ++ G+ MD +
Sbjct: 154 EGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFAATLEHHDL 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ DA IL G D+ GI G+G K A
Sbjct: 211 TWEQLVDA-----AILMGTDFNEGISGIGPKTA 238
>gi|37719664|gb|AAR01941.1| flap endonuclease 1 [Plasmodium falciparum]
Length = 648
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGN---------------CCFMDREKLPSALKMPL 247
A TED+D LVFG K +I L+ + ++ E++ L + +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTM 233
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F D CIL GCDY IKG+G K A
Sbjct: 234 DEFID-----FCILCGCDYCDTIKGIGSKTA 259
>gi|55376971|ref|YP_134821.1| flap endonuclease-1 [Haloarcula marismortui ATCC 43049]
gi|74520713|sp|Q5V5T7.1|FEN_HALMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55229696|gb|AAV45115.1| DNA repair protein Rad2 [Haloarcula marismortui ATCC 43049]
Length = 326
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG S + R G DYV TED D L+FGA + ++ G+ MD +
Sbjct: 154 EGEGQASVMARR---GDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFAATLEHHDL 210
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ DA IL G D+ GI G+G K A
Sbjct: 211 TWEQLVDA-----AILMGTDFNEGISGIGPKTA 238
>gi|392566068|gb|EIW59244.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 406
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 21/81 (25%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRY 257
+ED D L FGA I+Y+ + F + K P L+M +++FT+
Sbjct: 178 SEDMDTLTFGAP-ILYR-----HLTFSEARKTPISEINLQKALEGLEMNMSQFTE----- 226
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY IKG+G K A
Sbjct: 227 LCILLGCDYLEPIKGVGPKSA 247
>gi|47227957|emb|CAF97586.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKII--YKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
G D V +ED D L FGA +I +K G KL L++ +F D +
Sbjct: 16 GTVDAVASEDMDTLPFGANILIRQFKSKKDGEVIEYSLTKLLERLQINHQEFVD-----L 70
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CIL GCDY I G+G ++A
Sbjct: 71 CILLGCDYCEKICGLGPRRA 90
>gi|308504826|ref|XP_003114596.1| CRE-CRN-1 protein [Caenorhabditis remanei]
gi|308258778|gb|EFP02731.1| CRE-CRN-1 protein [Caenorhabditis remanei]
Length = 382
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ C + P + K+P+ +F
Sbjct: 169 AGKVFGTATEDMDALTFGS------------CVLLRHLLAPESKKIPIKEFHLARILEEM 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T+ +F +CIL GCDY I+G+G K+A + +
Sbjct: 217 KLTEEEFIDLCILLGCDYCGTIRGVGPKRAVELI 250
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 62 AEIRHKQKAAELLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------T 110
A+ H KA ++ + + + L G+C + P + K+P+ +F T
Sbjct: 161 AQCAHLVKAGKVFGTATEDMDALTF-GSCVLLRHLLAPESKKIPIKEFHLARILEEMKLT 219
Query: 111 DAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 141
+ +F +CIL GCDY I+G+G K+A + +
Sbjct: 220 EEEFIDLCILLGCDYCGTIRGVGPKRAVELI 250
>gi|62203342|gb|AAH92837.1| Zgc:110269 [Danio rerio]
gi|182888906|gb|AAI64364.1| Zgc:110269 protein [Danio rerio]
Length = 333
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE--KLPSALKMPLAKFTDAKFRYM 258
G + V +ED D L FG ++ +L+ + + KL AL++ +F D +
Sbjct: 125 GTVNAVASEDMDTLAFGGTVLLRQLNAKRDSEITEYSLPKLLEALQLKYEEFVD-----L 179
Query: 259 CILSGCDYWTGIKGMGLKKA 278
CIL GCDY I G+G +A
Sbjct: 180 CILLGCDYCDKIGGLGPSRA 199
>gi|67470614|ref|XP_651270.1| FEN-1 nuclease [Entamoeba histolytica HM-1:IMSS]
gi|317374901|sp|C4M6G8.1|FEN1_ENTHI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56467989|gb|EAL45884.1| FEN-1 nuclease, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710440|gb|EMD49517.1| Flap endonuclease, putative [Entamoeba histolytica KU27]
Length = 376
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
AG TED D L G++ ++ K + N RE S++ + FT +F +C
Sbjct: 170 AGKCYATATEDMDALTLGSEHVVRKFSANDNKKDPIREYSLSSI-LEETGFTMEQFIDLC 228
Query: 260 ILSGCDYWTGIKGMG 274
IL GCDY IKG+G
Sbjct: 229 ILLGCDYCETIKGVG 243
>gi|321473340|gb|EFX84308.1| hypothetical protein DAPPUDRAFT_47502 [Daphnia pulex]
Length = 374
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A KMP+ +F
Sbjct: 169 AGKVYATATEDMDSLTFGSNVLLRYLTYS------------EAKKMPIKEFHLDKILDGL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CI+ GCDY IKG+G K+AK+ +
Sbjct: 217 SYTMDEFIDLCIMLGCDYCDTIKGIGAKRAKELI 250
>gi|432927428|ref|XP_004081007.1| PREDICTED: flap endonuclease 1-like [Oryzias latipes]
Length = 380
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FG ++ L S A K+P+ +F T +F
Sbjct: 177 TEDMDGLTFGTNVLLRHLTAS------------EAKKLPIQEFHFNRILQDMDLTKEQFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY IKG+G K+A D +
Sbjct: 225 DLCILLGCDYCGTIKGIGPKRAVDLI 250
>gi|317376191|sp|B9EMY6.1|FEN1_SALSA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|221220444|gb|ACM08883.1| Flap endonuclease 1-B [Salmo salar]
gi|221221934|gb|ACM09628.1| Flap endonuclease 1-B [Salmo salar]
Length = 380
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVFATATEDMDGLTFGTGVLLRHLTAS------------EAKKLPIQEFQFTRLLQDI 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY IKG+G K+A D +
Sbjct: 217 NLTHEQFIDLCILLGCDYCGTIKGIGPKRAIDLI 250
>gi|68488322|ref|XP_711995.1| hypothetical protein CaO19.652 [Candida albicans SC5314]
gi|46433350|gb|EAK92794.1| hypothetical protein CaO19.652 [Candida albicans SC5314]
Length = 684
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 28/105 (26%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKL---------------DLSGNCCF------MDREKL 239
G DYVI++D D LVFGA++++ D++ + MD+ +
Sbjct: 155 GIVDYVISQDVDALVFGARRVLRNFSRFAEDIGKSPPKSSDITARSSYYVTPVDMDKVEQ 214
Query: 240 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 284
+ L T ++ ++ L G DY G K MG+ AK+ S
Sbjct: 215 ETGL-------TTSRLVFLASLRGGDYSVGAKKMGIVNAKNLALS 252
>gi|156398094|ref|XP_001638024.1| predicted protein [Nematostella vectensis]
gi|317374916|sp|A7RRJ0.1|FEN1_NEMVE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156225141|gb|EDO45961.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FG ++ L S A KMP+ +F + +F
Sbjct: 177 TEDMDALTFGTTVMLRHLTFS------------EAKKMPIKEFHLQNVLSEAGLSQDEFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY IKG+G K++ D +
Sbjct: 225 DLCILLGCDYCDSIKGIGPKRSVDLI 250
>gi|196004300|ref|XP_002112017.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
gi|317376198|sp|B3RVF0.1|FEN1_TRIAD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190585916|gb|EDV25984.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
Length = 377
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA---LKMPLAK--FTDAK 254
AG TED D L FG+ ++ L F + K+P LK L + F+ +
Sbjct: 169 AGKVYATGTEDMDALTFGSNVMLRHL------TFSEARKMPIQEFHLKNALQELNFSMEQ 222
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY IKG+G K+A
Sbjct: 223 FIDLCILLGCDYCDSIKGVGPKRA 246
>gi|193659550|ref|XP_001944971.1| PREDICTED: flap endonuclease 1 [Acyrthosiphon pisum]
Length = 380
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ + S A KMP+ +F
Sbjct: 169 AGKVYATATEDMDALTFGSPVLLRHMTFS------------EARKMPIQEFQLDSVLETM 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+ +F +CIL GCDY IKG+G K+A
Sbjct: 217 EMSRDEFIDLCILLGCDYCNSIKGVGPKRA 246
>gi|332021297|gb|EGI61676.1| Flap endonuclease 1-B [Acromyrmex echinatior]
Length = 381
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 21/89 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAK 249
AG TED D L FG ++ +L F + KLP + L++ +
Sbjct: 169 AGKVFATATEDMDALTFGCNVLLRRL------TFSEARKLPVQEIHFDKVLAGLELNHNE 222
Query: 250 FTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
F D +CI+ GCDY IKG+G K+A
Sbjct: 223 FID-----LCIMLGCDYTNSIKGVGPKRA 246
>gi|260944896|ref|XP_002616746.1| hypothetical protein CLUG_03987 [Clavispora lusitaniae ATCC 42720]
gi|238850395|gb|EEQ39859.1| hypothetical protein CLUG_03987 [Clavispora lusitaniae ATCC 42720]
Length = 737
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP---------SALKM----PL 247
G DYV+++DSD LVFGA ++ L + + D + P + + M
Sbjct: 161 GIVDYVVSDDSDTLVFGASQM---LRMFNRVKYFDEDNKPVLSSTDYYVTPVNMDHITER 217
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKD 280
+ + + +L G DY +G +G+G+ +AK+
Sbjct: 218 TGLSKERLLLVAVLRGGDYSSGTEGIGITRAKE 250
>gi|429965038|gb|ELA47035.1| hypothetical protein VCUG_01480 [Vavraia culicis 'floridensis']
Length = 335
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 242
+ NE + + + + G DYV TED D L F A ++ K + +++
Sbjct: 152 SENEAEAFCATLCRK---GIVDYVCTEDMDALCFRAP-VLLKNFVKDTVAEYRLDEILRD 207
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAK 279
+K+ + F D +CIL GCDY IKG+G KA+
Sbjct: 208 MKLEFSAFMD-----LCILLGCDYAGTIKGIGPMKAE 239
>gi|307173481|gb|EFN64391.1| Flap endonuclease 1-B [Camponotus floridanus]
Length = 382
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE----KLPSALKMPLAKFTDAKF 255
AG TED D L FG ++ +L LS +E K+ + L++ +F D
Sbjct: 169 AGKVFATATEDMDALTFGCDILLRRLTLSEARKLPVQEIHMDKVLTGLELNHDEFID--- 225
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYV--FSIMDPDFEN 292
+CI+ GCDY IKG+G K+A + + + +D EN
Sbjct: 226 --LCIMLGCDYTGSIKGVGPKRAIELIKNYRSLDKIIEN 262
>gi|241958698|ref|XP_002422068.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223645413|emb|CAX40069.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 686
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 28/105 (26%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKL---------------DLSGNCCF------MDREKL 239
G DYVI++D D LVFGA++++ D++ + MD+ +
Sbjct: 155 GIVDYVISQDVDALVFGARQVLRNFSRFAEDIGKSPPKTSDITARSSYYVTPVDMDKVEQ 214
Query: 240 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 284
+ L T ++ ++ L G DY G K MG+ AK+ S
Sbjct: 215 ETGL-------TTSRLIFLASLRGGDYSVGAKKMGIVNAKNLALS 252
>gi|68062082|ref|XP_673044.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490604|emb|CAI01886.1| hypothetical protein PB300433.00.0 [Plasmodium berghei]
Length = 375
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGN---------------CCFMDREKLPSALKMPL 247
A TED+D LVFG K +I L+ + + ++ E++ LK+ +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTM 233
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F D CIL GCDY IKG+G K A
Sbjct: 234 DEFID-----FCILCGCDYCDTIKGIGSKTA 259
>gi|82231650|sp|Q5I4H3.1|FEN1_XIPMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57639537|gb|AAW55636.1| flap endonuclease-1 [Xiphophorus maculatus]
gi|57639539|gb|AAW55637.1| flap endonuclease-1 [Xiphophorus maculatus]
Length = 380
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FG ++ L S A K+P+ +F T +F
Sbjct: 177 TEDMDGLTFGTNVLLRHLTAS------------EAKKLPVQEFHFNRILQDIGLTSEQFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY IKG+G K+A D +
Sbjct: 225 DLCILLGCDYCGTIKGIGPKRAIDLI 250
>gi|124505315|ref|XP_001351399.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
gi|74876406|sp|Q7K734.1|FEN1_PLAF7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|11559508|gb|AAG37989.1|AF093702_1 flap endonuclease 1 [Plasmodium falciparum]
gi|6562723|emb|CAB62862.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
Length = 672
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGN---------------CCFMDREKLPSALKMPL 247
A TED+D LVFG K +I L+ + ++ E++ L + +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTM 233
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F D CIL GCDY IKG+G K A
Sbjct: 234 DEFID-----FCILCGCDYCDTIKGIGSKTA 259
>gi|410722033|ref|ZP_11361349.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
gi|410597930|gb|EKQ52534.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
Length = 328
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCC---FMDREKL 239
A+ EG + S + R G A V ++D D ++FGA +++ L +SG ++ EK+
Sbjct: 149 AKGEGEAQASYMVAR---GDAWCVASQDYDCMLFGAPRMVKNLTISGTQNTPELIELEKI 205
Query: 240 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
L + + D + I+ G D+ GIKG+G KK
Sbjct: 206 LGTLDITREQLVD-----LAIMVGTDFNQGIKGIGAKKG 239
>gi|336364544|gb|EGN92901.1| hypothetical protein SERLA73DRAFT_190513 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388587|gb|EGO29731.1| hypothetical protein SERLADRAFT_457914 [Serpula lacrymans var.
lacrymans S7.9]
Length = 629
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 180 PFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 239
PF A SL+ I G+ADYV +ED+D+LV+ A I + G + +
Sbjct: 447 PFEAEALASSLV-------INGFADYVASEDTDVLVYEAPLIRNIANREGPLIVVSGSDV 499
Query: 240 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
S L++ + + D +L G D+ IK +G ++A ++
Sbjct: 500 RSVLQLERSSYID-----FALLLGTDFSQRIKNVGPQRALKFI 537
>gi|395330939|gb|EJF63321.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 429
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L FGA ++ L S + EK L+M +++FT+ +CIL G
Sbjct: 196 SEDMDTLTFGAPILLRHLTFSEARKTPISEISLEKALEGLEMDMSQFTE-----LCILLG 250
Query: 264 CDYWTGIKGMGLKKA 278
CDY IKG+G K A
Sbjct: 251 CDYLEPIKGVGPKGA 265
>gi|432330136|ref|YP_007248279.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
gi|432136845|gb|AGB01772.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
Length = 333
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 205 YVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA------KFTDAKFRYM 258
YVI++D D L+FGA ++ L +SG R+ + ++ LA K T + +
Sbjct: 169 YVISQDYDTLLFGAPTLVRNLTVSGKRKIRGRQITVNPERIVLAETLAGLKLTREQLIEI 228
Query: 259 CILSGCDYWTGIKGMGLK 276
IL G D+ G++G+G K
Sbjct: 229 GILVGTDFNPGVEGVGAK 246
>gi|308159723|gb|EFO62244.1| Flap structure-specific endonuclease [Giardia lamblia P15]
Length = 361
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSG 263
V + D D+L FG+ +I L G DRE + L + L + F+ +F +CIL G
Sbjct: 176 VASSDLDVLAFGSPCLIRNLAQGG-----DREIMEINLNIVLKELGFSYDEFLDLCILCG 230
Query: 264 CDYWTGIKGMGLKKA 278
CDY ++G+G K A
Sbjct: 231 CDYANSLEGIGPKTA 245
>gi|327278874|ref|XP_003224185.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Anolis
carolinensis]
Length = 515
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FG+ ++ L S A K+P+ +F T +F
Sbjct: 310 TEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRILQDLSLTQEEFV 357
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G K+A + +
Sbjct: 358 DLCILLGCDYCESIRGIGPKRAVELI 383
>gi|68074223|ref|XP_679026.1| flap exonuclease [Plasmodium berghei strain ANKA]
gi|74991237|sp|Q4Z015.1|FEN1_PLABA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56499663|emb|CAH96377.1| flap exonuclease, putative [Plasmodium berghei]
Length = 478
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGN---------------CCFMDREKLPSALKMPL 247
A TED+D LVFG K +I L+ + + ++ E++ LK+ +
Sbjct: 173 AHATATEDADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTM 232
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F D CIL GCDY IKG+G K A
Sbjct: 233 DEFID-----FCILCGCDYCDTIKGIGSKTA 258
>gi|388854784|emb|CCF51677.1| probable DNA repair endonuclease rad2 [Ustilago hordei]
Length = 374
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 17/114 (14%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCF-MDREKLPSALK---MPLAKFTDAKFRYMCILSG 263
+ED D L FG ++ L S + + LP AL+ M +A+F D +CIL G
Sbjct: 178 SEDMDTLTFGTPILLKHLTASEQKKLPVHQVDLPKALEGLGMDMAQFID-----LCILLG 232
Query: 264 CDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKW 317
CDY IKG+G K A + K K + F A +++P W
Sbjct: 233 CDYLDPIKGIGPKTALKLI--------REHKTLEKVVEHFKEEAKKSVQIPEHW 278
>gi|356498232|ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
max]
Length = 1707
Score = 42.0 bits (97), Expect = 0.65, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKFRYMCI 260
D V+T+DSD+L+FGA+ + + F DR+ + + + K T K M +
Sbjct: 1058 DGVVTDDSDVLLFGARSVYKNI-------FDDRKYVETYFMEDIEKELGLTREKLIRMAL 1110
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
L G DY G+ G+G+ A + V + + D
Sbjct: 1111 LLGSDYTEGVSGIGIVNAIEVVNAFPEED 1139
>gi|71023659|ref|XP_762059.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
gi|74699231|sp|Q4P1V1.1|FEN1_USTMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46101624|gb|EAK86857.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
Length = 374
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCF----MDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L FG ++ L S +D K L+M +A+F D +CIL G
Sbjct: 178 SEDMDTLTFGTPILLKHLTASEQKKLPVHQVDLAKALEGLQMTMAQFID-----LCILLG 232
Query: 264 CDYWTGIKGMGLKKA 278
CDY IKG+G K A
Sbjct: 233 CDYLDPIKGIGPKTA 247
>gi|67610024|ref|XP_667077.1| flap endonuclease 1 [Cryptosporidium hominis TU502]
gi|54658174|gb|EAL36849.1| flap endonuclease 1 [Cryptosporidium hominis]
Length = 454
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFT------D---AK 254
V+TED+D L FG I +L+ S + + +K PS K M + K + D +
Sbjct: 141 VVTEDADSLTFGTPIQIKQLNFSESSNKIS-DKSPSKQKNGMQIIKLSLILSELDINMDQ 199
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G A
Sbjct: 200 FIDLCILSGCDYCGTIRGIGTSTA 223
>gi|83286314|ref|XP_730108.1| Flap endonuclease-1 [Plasmodium yoelii yoelii 17XNL]
gi|74882336|sp|Q7RME3.1|FEN1_PLAYO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|23489735|gb|EAA21673.1| flap endonuclease-1-related [Plasmodium yoelii yoelii]
Length = 480
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGN---------------CCFMDREKLPSALKMPL 247
A TED+D LVFG K +I L+ + + ++ E++ LK+ +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTM 233
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F D CIL GCDY IKG+G K A
Sbjct: 234 DEFID-----FCILCGCDYCDTIKGIGSKTA 259
>gi|347601761|gb|AEP16246.1| flap endonuclease 1 [Emiliania huxleyi virus 208]
Length = 358
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS---ALKMPLAKF--TDAK 254
G A TED D L FG+ +I ++ + D++K P+ +L L T +
Sbjct: 167 TGKAYATATEDMDSLTFGSTYVIRHINST------DQKKQPTVEYSLPNILNDMGITMDQ 220
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G +A
Sbjct: 221 FIEICILSGCDYTKTIKGIGPTRA 244
>gi|347482295|gb|AEO98236.1| flap endonuclease-1 [Emiliania huxleyi virus 203]
gi|347601360|gb|AEP15846.1| flap structure-specific endonuclease 1 [Emiliania huxleyi virus
207]
gi|357972633|gb|AET97906.1| flap endonuclease-1 [Emiliania huxleyi virus 201]
Length = 358
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS---ALKMPLAKF--TDAK 254
G A TED D L FG+ +I ++ + D++K P+ +L L T +
Sbjct: 167 TGKAYATATEDMDSLTFGSTYVIRHINST------DQKKQPTVEYSLPNILNDMGITMDQ 220
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G +A
Sbjct: 221 FIEICILSGCDYTKTIKGIGPTRA 244
>gi|126653087|ref|XP_001388383.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
gi|317374887|sp|A3FPN7.1|FEN1_CRYPI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126117476|gb|EAZ51576.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
Length = 490
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFT------D---AK 254
V+TED+D L FG I +L+ S + + +K PS K M + K + D +
Sbjct: 177 VVTEDADSLTFGTPIQIKQLNFSESSNKI-TDKSPSKQKNGMQIIKLSLILSELDINMDQ 235
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY I+G+G A
Sbjct: 236 FIDLCILSGCDYCGTIRGIGTSTA 259
>gi|312137188|ref|YP_004004525.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
gi|311224907|gb|ADP77763.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
Length = 327
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 132 MGLKKAKDYVFSIMDPDFENALRKINVYGKIG-SYVKITKEFLTSGAPQPFGARNEGRSL 190
M L+ K + ++ D E A + + +I ++ +KE L + A NEG +
Sbjct: 97 MRLEAEKRWKEALKKKDLEKARKYASRASRISKEIIESSKELLDAMGIPYIQAPNEGEAQ 156
Query: 191 LSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG--NCCFMDREKLPSALKMPLA 248
+ + G A V ++D D L+FGA ++I L +S N ++ +K+ L +
Sbjct: 157 AVYLVKN---GDAWAVASQDYDCLLFGAPRVIRNLAISSDINLELLELDKILKKLGISRE 213
Query: 249 KFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ D + +L G D+ G+KG+G K+ + +
Sbjct: 214 QLID-----IALLVGTDFNPGVKGIGAKRGLELI 242
>gi|449454486|ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449472478|ref|XP_004153607.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449516535|ref|XP_004165302.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
Length = 606
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG----NCCFMDREK 238
A+ E +L + E N G+ D IT DSD +FGAK +I + + C FM
Sbjct: 137 AKGEAEALCA---ELNQKGFVDACITADSDAFLFGAKCVIKSFNPNSKEPLECYFM---- 189
Query: 239 LPSALKMPLAKFTDAKFRYMCILSGCDY-WTGIKGMGLKKAKDYVFSIMDPDFENRKEYV 297
S ++ L F + +L G D+ G++G+GL A +V D + N+ +
Sbjct: 190 --SDIEAALG-FNRNHLIAISLLVGNDHDLNGVQGVGLDTAVCFVQDYTDDEILNKLYEI 246
Query: 298 KYAKVFPLTAILDM 311
PL + L++
Sbjct: 247 GNEDTTPLQSGLEL 260
>gi|73852488|ref|YP_293772.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|72415204|emb|CAI65441.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|347481843|gb|AEO97829.1| flap endonuclease-1 [Emiliania huxleyi virus 84]
gi|347600467|gb|AEP14954.1| endonuclease [Emiliania huxleyi virus 88]
Length = 358
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS---ALKMPLAKF--TDAK 254
G A TED D L FG+ +I ++ + D++K P+ +L L T +
Sbjct: 167 TGKAYATATEDMDSLTFGSTYVIRHINST------DQKKQPTVEYSLPNILNDMGITMDQ 220
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G +A
Sbjct: 221 FIEICILSGCDYTKTIKGIGPTRA 244
>gi|333986804|ref|YP_004519411.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
gi|333824948|gb|AEG17610.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
Length = 328
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 17/114 (14%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG---NCCFMDREKL 239
A EG + S + E+ G A V ++D D ++FGA +++ L ++G N ++ +K+
Sbjct: 149 AMGEGEAQASYMVEK---GDAWCVGSQDYDCVLFGATRMVKNLTITGGKANLELIELKKV 205
Query: 240 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA----KDY--VFSIMD 287
L++ + D + IL+G D+ G+KG+G KK K++ +F+I+D
Sbjct: 206 LERLEITREQLID-----VAILAGTDFNEGVKGIGAKKGLKLVKEHGDIFNILD 254
>gi|355570852|ref|ZP_09042122.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
gi|354826134|gb|EHF10350.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
Length = 333
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 135 KKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPF-GARNEGRSLLSA 193
K + + +++ D E A R+ +I + T L + P+ A +EG + +
Sbjct: 101 KAGEKWKEALLRGDTEEAYRQARSSSRIDEEIIATSRQLITLLGLPWIQAPSEGEAQAAY 160
Query: 194 VTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDR------EKLPSALKMPL 247
+ R G A YV+++D D L+FGA ++ L +SG R E++ + +
Sbjct: 161 MVMR---GDARYVVSQDYDTLLFGAPVLVRNLTVSGKRKVRGRTLAIMPERIVLSSVLTG 217
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFEN----RKEYVKYAKVF 303
+ + + +L G D+ GI+G+G K A + + + +FE R+ V + ++F
Sbjct: 218 LEISREDLIRVGLLVGTDFNPGIRGVGAKTA---LRMVRNGEFEQVMRERQPGVDWEEIF 274
>gi|283481241|emb|CAZ69357.1| putative endonuclease [Emiliania huxleyi virus 99B1]
Length = 358
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS---ALKMPLAKF--TDAK 254
G A TED D L FG+ +I ++ + D++K P+ +L L T +
Sbjct: 167 TGKAYATATEDMDSLTFGSTYVIRHINST------DQKKQPTVEYSLPNILNDMGITMDQ 220
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CILSGCDY IKG+G +A
Sbjct: 221 FIEICILSGCDYTKTIKGIGPTRA 244
>gi|449685242|ref|XP_002159259.2| PREDICTED: flap endonuclease 1-like, partial [Hydra magnipapillata]
Length = 230
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 23/78 (29%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
+ED D L FGA ++ L S A KMP+ +F T +F
Sbjct: 81 SEDMDSLTFGANILLRHLTFS------------EARKMPIQEFHYSKVLEELELTKEQFV 128
Query: 257 YMCILSGCDYWTGIKGMG 274
+CIL GCDY IKG+G
Sbjct: 129 DLCILLGCDYCASIKGVG 146
>gi|452822684|gb|EME29701.1| flap endonuclease-1 [Galdieria sulphuraria]
Length = 377
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA----KFTDAKFRYMCILSG 263
+ED D L FG+ K+I +L + + P + A F+ +F +CIL G
Sbjct: 177 SEDMDSLTFGSSKVIRQLWVGATSTAEKKGIHPLEFSLEKALLELNFSYEQFIDLCILCG 236
Query: 264 CDYWTGIKGMGLKKA 278
CDY I+G+G KA
Sbjct: 237 CDYLDSIRGIGPYKA 251
>gi|50302247|ref|XP_451057.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640188|emb|CAH02645.1| KLLA0A01320p [Kluyveromyces lactis]
Length = 584
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 26/117 (22%)
Query: 179 QPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK 238
Q A EG + + + + G D+V++ D+D+L FGA K++ G +
Sbjct: 136 QTINAPGEGEAQCAFL---QLVGQVDFVLSNDADVLSFGASKVLKNYSKHG------WQD 186
Query: 239 LPSALKMPLAKFTDAKF---------------RYMC--ILSGCDYWTGIKGMGLKKA 278
LP++ P+ + +F R++ +L G DY G+KG+G K+A
Sbjct: 187 LPNSSNSPVKSKQNERFVTFVDLDIIKDWDRDRFVLFNLLVGSDYNGGVKGLGGKRA 243
>gi|317374918|sp|C1BM18.1|FEN1_OSMMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|225708450|gb|ACO10071.1| Flap endonuclease 1-B [Osmerus mordax]
Length = 380
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVFATATEDMDGLTFGTGVLLRHLTAS------------EAKKLPIQEFHFSRILQDI 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ +F +CIL GCDY IKG+G K+A D +
Sbjct: 217 GLSHEQFIDLCILLGCDYCGTIKGIGPKRAMDLI 250
>gi|351699147|gb|EHB02066.1| Flap endonuclease 1 [Heterocephalus glaber]
Length = 380
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EARKLPIQEFHLSRILQAL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL G DY I+G+G K+A D +
Sbjct: 217 NLTQEQFVDLCILLGSDYCESIRGIGPKRAVDLI 250
>gi|260798636|ref|XP_002594306.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
gi|317374877|sp|C3ZBT0.1|FEN1_BRAFL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229279539|gb|EEN50317.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
Length = 380
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 23/82 (28%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D+L FG ++ L S A KMP+ ++ T +F
Sbjct: 177 TEDMDVLTFGTNIMLRHLTFS------------EARKMPIKEYYYDRLLAELDLTQDQFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY I+G+G K+A
Sbjct: 225 DLCILLGCDYCDSIRGIGPKRA 246
>gi|70942151|ref|XP_741275.1| flap exonuclease [Plasmodium chabaudi chabaudi]
gi|74978262|sp|Q4XXP8.1|FEN1_PLACH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56519555|emb|CAH78313.1| flap exonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 479
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGN---------------CCFMDREKLPSALKMPL 247
A TED+D LVFG K +I L+ + + ++ E++ LK+ +
Sbjct: 174 AHATATEDADALVFGTKILIRNLNANASSNKNKNKNSSKRGYILTEINLEQVLKGLKLTM 233
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
+F D CIL GCDY IKG+G K A
Sbjct: 234 DEFID-----FCILCGCDYCDTIKGIGSKTA 259
>gi|221052892|ref|XP_002261169.1| exonuclease I [Plasmodium knowlesi strain H]
gi|194247173|emb|CAQ38357.1| exonuclease I, putative [Plasmodium knowlesi strain H]
Length = 1205
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC---CFM 234
GY VI+EDSDLLV+G +++YKL +G C C M
Sbjct: 166 GYISCVISEDSDLLVYGCPRVLYKLKNTGECDEICLM 202
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHS 76
Y+++ K + + H IKVI VFDG LP K A R +R E + K++A E++ S
Sbjct: 55 YLSFIEKMLECIYEHNIKVIFVFDGEELPEKRAENVIRNERRE-KAKKEAQEIIKS 109
>gi|365984110|ref|XP_003668888.1| hypothetical protein NDAI_0B06130 [Naumovozyma dairenensis CBS 421]
gi|343767655|emb|CCD23645.1| hypothetical protein NDAI_0B06130 [Naumovozyma dairenensis CBS 421]
Length = 774
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-------- 250
+ GY D+V T DSD+ +FG K+I N M P + PL K
Sbjct: 192 VHGYVDFVWTNDSDIFIFGGTKVIKNYSKFVNDIGMTAS--PKKVSSPLRKAKEYFITVI 249
Query: 251 --------TDAKFR-----YMCILSGCDYWTGIKGMGLKKAKDYVFSIMD-PDFENR 293
T+ K + +L G DY G+KG+G K K S ++ P+F N+
Sbjct: 250 DLNEVIRKTNGKINQWSLLFFSVLLGADYNKGVKGLG--KTKALQLSQLEYPNFSNQ 304
>gi|392562036|gb|EIW55217.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 525
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 180 PFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 239
PF A SL+ I GYADYV +ED+D+LV+ A I SG + +
Sbjct: 341 PFEAEALAASLV-------IHGYADYVASEDTDVLVYEAPLIRNITSSSGPLVLISGADV 393
Query: 240 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ L++ + D +L G D+ IK +G +A ++
Sbjct: 394 RTVLQLDRPGYID-----FALLLGTDFSQRIKNVGPARALKFI 431
>gi|68488283|ref|XP_712017.1| hypothetical protein CaO19.8267 [Candida albicans SC5314]
gi|46433375|gb|EAK92818.1| hypothetical protein CaO19.8267 [Candida albicans SC5314]
Length = 684
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 30/158 (18%)
Query: 149 FENALRK---INVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADY 205
+E+ L++ I+ Y + +V+ K L++ + A EG + + + + G DY
Sbjct: 103 YEDELQRLALISNYSENNPFVEQLKIELSNNKIEYVQAPGEGEAQCAYLQK---LGIVDY 159
Query: 206 VITEDSDLLVFGAKKIIYKL---------------DLSGNCCF----MDREKLPSALKMP 246
VI++D D LVFGA++++ D++ + +D +K+ +
Sbjct: 160 VISQDVDALVFGARRVLRNFSRFAEDIGKSPPKSSDITARSSYYVTPVDMDKVEQETGLA 219
Query: 247 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 284
++ ++ L G DY G K MG+ AK+ S
Sbjct: 220 TSRLV-----FLASLRGGDYSVGAKKMGIVNAKNLALS 252
>gi|409042314|gb|EKM51798.1| hypothetical protein PHACADRAFT_102664 [Phanerochaete carnosa
HHB-10118-sp]
Length = 384
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLS----GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L F + ++ L S ++ EK+ L+M +++F D +CIL G
Sbjct: 178 SEDMDTLTFNSAILLRHLTFSEARKAPISEINLEKVLEGLEMSMSQFID-----LCILLG 232
Query: 264 CDYWTGIKGMGLKKA 278
CDY IKG+G K A
Sbjct: 233 CDYLEPIKGVGPKSA 247
>gi|395545349|ref|XP_003774565.1| PREDICTED: flap endonuclease 1 [Sarcophilus harrisii]
Length = 380
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRVLQGL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL G DY I+G+G K+A D +
Sbjct: 217 GLTQEQFVDLCILLGSDYCESIRGIGPKRAMDLI 250
>gi|403347306|gb|EJY73073.1| hypothetical protein OXYTRI_05797 [Oxytricha trifallax]
Length = 1055
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFR-- 256
I G D V+TEDSD+L+FGA+K+ + DR K M + + R
Sbjct: 785 INGLVDGVVTEDSDVLLFGARKVYRNI--------FDRNKFAEKYDMKIIEREMGLDRDD 836
Query: 257 --YMCILSGCDYWTGIKGMG 274
M + G DY G++G+
Sbjct: 837 LIKMALFMGSDYTMGVRGIA 856
>gi|167391034|ref|XP_001739610.1| Flap endonuclease 1-A [Entamoeba dispar SAW760]
gi|317374900|sp|B0EN90.1|FEN1_ENTDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|165896655|gb|EDR24004.1| Flap endonuclease 1-A, putative [Entamoeba dispar SAW760]
Length = 376
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
AG TED D L G++ ++ K S N RE S++ + F+ +F +C
Sbjct: 170 AGKCYATATEDMDALTLGSEYVVRKFSASDNKKEPIREYSLSSI-LEETGFSMEQFIDLC 228
Query: 260 ILSGCDYWTGIKGMG 274
IL GCDY IKG+G
Sbjct: 229 ILLGCDYCDTIKGVG 243
>gi|170093544|ref|XP_001877993.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646447|gb|EDR10692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 633
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 9/132 (6%)
Query: 154 RKINVYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDL 213
R +NV V TKE + FG + + N G D V++ED D
Sbjct: 101 RGVNVLTAEHWAVDPTKEIADAFG---FGTHQAPGEAEAELAYLNSIGILDAVMSEDGDA 157
Query: 214 LVFGAKKIIYKLDLSGNCCFMDREKL----PSALK-MPLAKFTDAKFRYMCILSGCDYWT 268
LVFGA+ +I K L+G D + + +A++ P T +L G DY T
Sbjct: 158 LVFGAQVVIRKPHLNGEKIKWDGDTVKIYTSTAIRSTPSVSLTQGDMVLYALLCGGDYDT 217
Query: 269 -GIKGMGLKKAK 279
G+KG G A+
Sbjct: 218 VGLKGCGKVTAQ 229
>gi|126179869|ref|YP_001047834.1| flap endonuclease-1 [Methanoculleus marisnigri JR1]
gi|166973702|sp|A3CWV2.1|FEN_METMJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|125862663|gb|ABN57852.1| flap endonuclease 1 [Methanoculleus marisnigri JR1]
Length = 333
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 143 SIMDPDFENALRKINVYGKIGSY-VKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAG 201
++ + D E A ++ + +I S+ + ++E L A +EG + + + + G
Sbjct: 109 ALREGDMEEAYKQASASARIDSHTIASSRELLDLLGIPWVQAPSEGEAQAAYMARQ---G 165
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTD------AKF 255
Y +++D D L+FG+ ++ L +SG R + ++ L+ F D +
Sbjct: 166 KVTYAVSQDYDSLLFGSPVLVRNLTVSGRRKTRGRTITVNPERIVLSSFLDRLGVTREQL 225
Query: 256 RYMCILSGCDYWTGIKGMGLKKAK--------DYVFSIMDPDFENRKEYVKYAKVFPLTA 307
+ IL G D+ GI+G+G K A + V + PDF N + P+T
Sbjct: 226 VKIGILVGTDFNPGIRGVGGKTALKIVRNGEFESVIAEKQPDF-NPAPIRDFFLNPPVTD 284
Query: 308 --ILDMKVPAKWYRRIIGSIEVICG 330
L+ + P + G +E++CG
Sbjct: 285 DYTLEWRTPD-----VEGVVEMLCG 304
>gi|159118360|ref|XP_001709399.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
gi|317374902|sp|A8B672.1|FEN1_GIAIC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157437515|gb|EDO81725.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
Length = 361
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK--FTDAKFRYMCILSG 263
V + D D+L FG+ +I L G DRE + L L + F+ +F +CIL G
Sbjct: 176 VASSDLDVLAFGSPCLIRNLAQGG-----DREIVEINLNTVLKELGFSYDEFLDLCILCG 230
Query: 264 CDYWTGIKGMGLKKA 278
CDY ++G+G K A
Sbjct: 231 CDYANSLEGIGPKTA 245
>gi|50287803|ref|XP_446331.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525638|emb|CAG59255.1| unnamed protein product [Candida glabrata]
Length = 992
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGN-CCFMDREKLPSALKMPLAKFTDAKFRYMCILS 262
D +IT+DSD+ +FG KK+ + N + D E + L + T + L
Sbjct: 768 DGIITDDSDVFLFGGKKVYKNMFQEKNYVEYYDSEDIYQGLGL-----TRETMIELAQLL 822
Query: 263 GCDYWTGIKGMG 274
G DY TGIKGMG
Sbjct: 823 GSDYTTGIKGMG 834
>gi|170087736|ref|XP_001875091.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650291|gb|EDR14532.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 582
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D V +EDSDL+V GA ++ N + + + K FTD F + +
Sbjct: 153 GYIDAVASEDSDLIVLGAAVVLRNFLHEDNNEKVTVYRAEAIRKHAALGFTDTDFLVIAL 212
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G DY G++ G++ A
Sbjct: 213 LVGGDYDGGLEWCGIRIA 230
>gi|317376190|sp|D3BN56.1|FEN1_POLPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|281203217|gb|EFA77418.1| XPG [Polysphondylium pallidum PN500]
Length = 388
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA------KFRYMCIL 261
+ED D L G ++ +L F + KLP +++ L K D +F +CIL
Sbjct: 178 SEDMDSLTLGTTILLRRL------TFSEARKLP-IMEIELEKVLDGLDLTHDQFVDLCIL 230
Query: 262 SGCDYWTGIKGMGLKKAKDYV 282
GCDY IKG+G KK+ D +
Sbjct: 231 LGCDYCDTIKGIGPKKSFDMI 251
>gi|407851500|gb|EKG05394.1| hypothetical protein TCSYLVIO_003532 [Trypanosoma cruzi]
Length = 393
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V TED D L FGA ++ L S A K P+A+F T +
Sbjct: 179 VATEDMDALTFGAPVMLRHLTYS------------EAKKRPIAEFHLDEILGITGLTMTQ 226
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY I G+G +KA
Sbjct: 227 FIDLCILLGCDYVPKISGIGPQKA 250
>gi|340367941|ref|XP_003382511.1| PREDICTED: flap endonuclease 1-like [Amphimedon queenslandica]
Length = 373
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE----KLPSALKMPLAKFTDAKF 255
AG TED D L FG+ ++ L S RE K + L M ++F D
Sbjct: 169 AGKVYATATEDMDALTFGSSILVRNLTASEARKLPVREINLSKALTELDMDQSQFID--- 225
Query: 256 RYMCILSGCDYWTGIKGMG 274
+CIL GCDY IKG+G
Sbjct: 226 --LCILLGCDYCDSIKGIG 242
>gi|242211748|ref|XP_002471711.1| predicted protein [Postia placenta Mad-698-R]
gi|220729267|gb|EED83145.1| predicted protein [Postia placenta Mad-698-R]
Length = 642
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
E +L SA+ + GYADYV +ED+D+LV+ A I + G + + L++
Sbjct: 461 EAEALASALV---LNGYADYVASEDTDVLVYDAPLIRNITNRKGPLVVISGTDVREHLRL 517
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ F D ++ G D+ IK +G +A ++
Sbjct: 518 DRSSFVD-----FALMLGTDFSQRIKNVGPARALKFI 549
>gi|84489880|ref|YP_448112.1| flap endonuclease-1 [Methanosphaera stadtmanae DSM 3091]
gi|121717163|sp|Q2NFD4.1|FEN_METST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|84373199|gb|ABC57469.1| flap structure-specific endonuclease [Methanosphaera stadtmanae DSM
3091]
Length = 328
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSG----NCCFMDREK 238
AR EG + S + +N A +A V+++D D L FGA ++I L LS N + EK
Sbjct: 149 ARTEGEAQASYMVSQNDA-WA--VVSQDYDCLQFGATRMIRNLKLSKSNSKNLELISLEK 205
Query: 239 LPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
L + + D + +L G D+ G+ G+G KK
Sbjct: 206 TLKELNLTREQLVD-----VAMLVGTDFNKGVYGIGAKKG 240
>gi|326527491|dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1503
Score = 40.8 bits (94), Expect = 1.4, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 255
I D V+T+DSD+ +FGA+ + + F DR+ + + L + T +
Sbjct: 906 INNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYVETYLMKDIESELGLTREQL 958
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVK 298
M +L G DY GI G+G+ A + V + + D + +E+++
Sbjct: 959 IRMAMLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQQFREWIE 1002
>gi|307214986|gb|EFN89831.1| Flap endonuclease 1-B [Harpegnathos saltator]
Length = 380
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 21/89 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAK 249
AG TED D L FG ++ +L F + KLP L++ +
Sbjct: 169 AGKVFATATEDMDALTFGCNVLLRRL------TFSEARKLPVQEIHFDKVLGGLELNHNE 222
Query: 250 FTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
F D +CI+ GCDY IKG+G K+A
Sbjct: 223 FID-----LCIMLGCDYTGSIKGVGPKRA 246
>gi|41614884|ref|NP_963382.1| flap endonuclease-1 [Nanoarchaeum equitans Kin4-M]
gi|48427872|sp|P61942.1|FEN_NANEQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40068608|gb|AAR38943.1| NEQ088 [Nanoarchaeum equitans Kin4-M]
Length = 339
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 47/218 (21%)
Query: 111 DAKFRYMCILSGCDYWT-GIKGMGLKKAKDYVFSIMDPDFE------------------- 150
D+K R LSG Y T + G+K YVF P F+
Sbjct: 50 DSKGRITSHLSGLFYRTINLLEYGIKPI--YVFDGTPPKFKIVAWEKRKKHKEQLESKYK 107
Query: 151 NALRKINVY---------GKIGSY-VKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIA 200
AL+K N+ GK+ SY V+ K+ L + A +EG + + +T++
Sbjct: 108 EALKKGNIQEAIKYAKSLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKK--- 164
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLS------GNCCFMDREKLPSALKMPLA----KF 250
G +DY ++D D L+FG+ +++ + +S G ++ E P +++ K
Sbjct: 165 GVSDYCGSQDYDSLLFGSPRVVRNITISEKRKLPGKNIYV--EVKPEVIELEAVLNYWKI 222
Query: 251 TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDP 288
T + + +L G DY + G+G K A + V DP
Sbjct: 223 TREQLIAIAMLLGTDYNEKVPGIGPKTAIEIVKRFGDP 260
>gi|170593271|ref|XP_001901388.1| Flap endonuclease-1 [Brugia malayi]
gi|317374878|sp|A8QCH0.1|FEN1_BRUMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158591455|gb|EDP30068.1| Flap endonuclease-1, putative [Brugia malayi]
Length = 378
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE-KLPSALK---MPLAKFTDAKF 255
AG ++ED D L FG+ ++ ++ S +E L LK M + +F D
Sbjct: 169 AGKVFATVSEDMDALTFGSPILLRQMIASEAKKLPVKEMNLNQVLKDFGMNMGQFVD--- 225
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY + I+G+G KKA
Sbjct: 226 --LCILLGCDYVSTIRGIGPKKA 246
>gi|366998731|ref|XP_003684102.1| hypothetical protein TPHA_0A05940 [Tetrapisispora phaffii CBS 4417]
gi|357522397|emb|CCE61668.1| hypothetical protein TPHA_0A05940 [Tetrapisispora phaffii CBS 4417]
Length = 740
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 201 GYADYVITEDSDLLVFGAKKII-----YKLDLSGNCCFMDREKLPSALKMPLAKFTD--- 252
+ D+V++ DSD ++FG KI+ Y+ D+ D + K D
Sbjct: 184 NFVDFVLSNDSDNILFGCTKILKNYSRYREDIGSTHVTKDNRPVRRNSKETYVTVVDMDK 243
Query: 253 ----AKFRY-------MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENR 293
A R+ + + G DY GIKG+G +K+ + S+ +PDF N+
Sbjct: 244 IALLANERFDKPAILLLTVFLGADYNKGIKGLGKEKSI-ILSSLRNPDFSNQ 294
>gi|407414008|gb|EKF35678.1| hypothetical protein MOQ_002324 [Trypanosoma cruzi marinkellei]
Length = 393
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V TED D L FGA ++ L S A K P+A+F T +
Sbjct: 179 VATEDMDALTFGAPVMLRHLTYS------------EAKKRPIAEFHLDEILGITGLTMTQ 226
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY I G+G +KA
Sbjct: 227 FIDLCILLGCDYVPKIPGIGPQKA 250
>gi|348670592|gb|EGZ10413.1| hypothetical protein PHYSODRAFT_355246 [Phytophthora sojae]
Length = 165
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
YV Y M I LL + + +VFDG LP K+ TEE+RRK +QK EL
Sbjct: 55 YVTYFMDRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKA-----RQKNREL 102
>gi|402580560|gb|EJW74510.1| hypothetical protein WUBG_14580, partial [Wuchereria bancrofti]
Length = 266
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP-------SALK---MPLAK 249
AG ++ED D L FG+ ++ ++ S + +KLP LK M + +
Sbjct: 169 AGKVFATVSEDMDALTFGSPILLRQMIAS------EAKKLPVKEMNLNQVLKDFGMNMGQ 222
Query: 250 FTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
F D +CIL GCDY + I+G+G KKA
Sbjct: 223 FVD-----LCILLGCDYVSTIRGIGPKKA 246
>gi|15778123|dbj|BAB68507.1| FEN-1 nuclease [Gallus gallus]
Length = 381
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLNRVLQDL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY I+G+G K+A + +
Sbjct: 217 GLTWEQFVDLCILLGCDYCESIRGIGPKRAVELI 250
>gi|19173066|ref|NP_597617.1| STRUCTURE-SPECIFIC ENDONUCLEASE OF THE XPG/RAD2 FAMILY
[Encephalitozoon cuniculi GB-M1]
gi|74621278|sp|Q8SS91.1|FEN1_ENCCU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19168733|emb|CAD26252.1| STRUCTURE-SPECIFIC ENDONUCLEASE OF THE XPG/RAD2 FAMILY
[Encephalitozoon cuniculi GB-M1]
Length = 345
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 23/129 (17%)
Query: 206 VITEDSDLLVFGAKKIIYKLD--LSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
V TED D L FG+ ++ + S M+ LP L+ ++F +CIL G
Sbjct: 174 VATEDMDALTFGSPVVLRNFNGTQSKRLPVME-HNLPQILED--LSLDHSEFIDLCILLG 230
Query: 264 CDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWY----R 319
CDY + +KG+G KKA + K+ + + D++VP W +
Sbjct: 231 CDYCSTLKGIGPKKALGLI--------------KKHRSIGNILKNEDLEVPGDWRYSDAQ 276
Query: 320 RIIGSIEVI 328
+I GS+ I
Sbjct: 277 KIFGSLAEI 285
>gi|341882587|gb|EGT38522.1| hypothetical protein CAEBREN_12338 [Caenorhabditis brenneri]
gi|341895701|gb|EGT51636.1| hypothetical protein CAEBREN_24192 [Caenorhabditis brenneri]
Length = 382
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L P + K+P+ +F
Sbjct: 169 AGKVFGTATEDMDALTFGSSVLLRHL------------LAPESKKIPIKEFHLARVLEEM 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
++ +F +CIL GCDY I+G+G KKA + +
Sbjct: 217 KLSEDEFIDLCILLGCDYCGTIRGVGPKKAVELI 250
>gi|71652611|ref|XP_814958.1| flap endonuclease-1 (FEN-1) [Trypanosoma cruzi strain CL Brener]
gi|122023721|sp|Q4DKQ5.1|FEN1_TRYCC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|70879977|gb|EAN93107.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma cruzi]
Length = 393
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V TED D L FGA ++ L S A K P+A+F T +
Sbjct: 179 VATEDMDALTFGAPVMLRHLTYS------------EAKKRPIAEFHLDEILGITGLTMTQ 226
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F +CIL GCDY I G+G +KA
Sbjct: 227 FIDLCILLGCDYVPKIPGIGPQKA 250
>gi|118405170|ref|NP_001072959.1| flap endonuclease 1 [Gallus gallus]
gi|82082625|sp|Q5ZLN4.1|FEN1_CHICK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53129083|emb|CAG31359.1| hypothetical protein RCJMB04_5g12 [Gallus gallus]
Length = 381
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLNRVLQDL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY I+G+G K+A + +
Sbjct: 217 GLTWEQFVDLCILLGCDYCESIRGIGPKRAVELI 250
>gi|448508200|ref|XP_003865895.1| Yen1 protein [Candida orthopsilosis Co 90-125]
gi|380350233|emb|CCG20454.1| Yen1 protein [Candida orthopsilosis Co 90-125]
Length = 616
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Query: 148 DFENALRKIN---VYGKIGSYVKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYAD 204
D+E L K + + +V+ K+ L + A E + + + + G D
Sbjct: 100 DYEEELEKFQHMVYFSEPNEFVEQLKDSLKVNKIEYLQAAGEAEAQCAYIQK---LGIVD 156
Query: 205 YVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM-------------PLAKFT 251
+VIT D D L+FGA +++ K + LK +
Sbjct: 157 FVITNDVDSLIFGATQVLRNYSRFVEDIGHSPSKKSATLKQRYYVTPVNMKRIEEITGLN 216
Query: 252 DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFS 284
A+ ++ L G DY +G+K MG+ AK+ S
Sbjct: 217 RARLVFLASLRGGDYSSGVKRMGITNAKNLALS 249
>gi|449329677|gb|AGE95947.1| structure-specific endonuclease of the XPG/RAD2 family
[Encephalitozoon cuniculi]
Length = 345
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 23/129 (17%)
Query: 206 VITEDSDLLVFGAKKIIYKLD--LSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
V TED D L FG+ ++ + S M+ LP L+ ++F +CIL G
Sbjct: 174 VATEDMDALTFGSPVVLRNFNGTQSKRLPVME-HNLPQILED--LSLDHSEFIDLCILLG 230
Query: 264 CDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKWY----R 319
CDY + +KG+G KKA + K+ + + D++VP W +
Sbjct: 231 CDYCSTLKGIGPKKALGLI--------------KKHRSIGNILKNEDLEVPGDWRYSDAQ 276
Query: 320 RIIGSIEVI 328
+I GS+ I
Sbjct: 277 KIFGSLAEI 285
>gi|348688657|gb|EGZ28471.1| hypothetical protein PHYSODRAFT_294028 [Phytophthora sojae]
Length = 390
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDRE-KLPSALKMPLAKFTDAKFRYMCILSGCDY 266
TED D L FG + +L +S E +L AL+ + T +F +CIL GCDY
Sbjct: 183 TEDMDALTFGVPVLYRRLTVSPAKKIPILEIRLERALQE--LELTQEQFVDLCILCGCDY 240
Query: 267 WTGIKGMGLKKA 278
I+G+G KKA
Sbjct: 241 CDSIRGVGPKKA 252
>gi|156395868|ref|XP_001637332.1| predicted protein [Nematostella vectensis]
gi|156224443|gb|EDO45269.1| predicted protein [Nematostella vectensis]
Length = 250
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKI---IYKLDLSGNC--CFMDREKLPSALKMPLAKFTD 252
++ G D IT+DSD+ +FG +++ I+ + C C E + L + +K
Sbjct: 155 DMTGQTDGTITDDSDVFLFGGRRVYKNIFNQNKHAECYTC----EDIDKGLALSRSKMIK 210
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKE 295
F ++G DY GI+G+G A + + F KE
Sbjct: 211 LAF-----VTGSDYTEGIQGLGAVSAMEVLHEFSQDGFAALKE 248
>gi|297815070|ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321256|gb|EFH51677.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1463
Score = 40.4 bits (93), Expect = 1.8, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKFRYMCI 260
D ++T+DSD+ +FGA+ + + F DR+ + + + K + K M +
Sbjct: 956 DGIVTDDSDVFLFGARSVYKNI-------FDDRKYVETYFMKDIEKELGLSRDKIIRMAM 1008
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVKYAKVFPLTAILDMKVPAK 316
L G DY GI G+G+ A + V + + D +E+V+ P IL +K+ +
Sbjct: 1009 LLGSDYTEGISGIGIVNAIEVVTAFPEEDGLHKFREWVES----PDPTILGLKIKKR 1061
>gi|226478114|emb|CAX72750.1| Flap endonuclease 1 [Schistosoma japonicum]
Length = 389
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 23/88 (26%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA-----------K 254
V TED D L FG ++ L S A KM + +F A +
Sbjct: 175 VGTEDMDALAFGTPVLLRHLTFS------------EARKMAIQEFNLASVLEGLSLTMDQ 222
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYV 282
F +CIL GCDY I+G+G KKA D +
Sbjct: 223 FVDLCILLGCDYVDTIRGIGPKKALDLL 250
>gi|126344550|ref|XP_001362314.1| PREDICTED: flap endonuclease 1-like [Monodelphis domestica]
Length = 380
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRVLQGL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL G DY I+G+G K+A D +
Sbjct: 217 GLTQEQFVDLCILLGSDYCESIRGIGPKRAIDLI 250
>gi|336365482|gb|EGN93832.1| hypothetical protein SERLA73DRAFT_188945 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378041|gb|EGO19200.1| hypothetical protein SERLADRAFT_479560 [Serpula lacrymans var.
lacrymans S7.9]
Length = 407
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLS----GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L F A ++ L S ++ ++ L+M ++ FTD +CIL G
Sbjct: 178 SEDMDTLTFSAPILLRHLTFSEARKAPISEINLQRALEGLEMDMSLFTD-----LCILLG 232
Query: 264 CDYWTGIKGMGLKKA 278
CDY IKG+G K A
Sbjct: 233 CDYLEPIKGVGPKSA 247
>gi|145349446|ref|XP_001419144.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|317374919|sp|A4S1G4.1|FEN1_OSTLU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|144579375|gb|ABO97437.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 389
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
AG V TED D L F A ++ L D +K+ + L + +F D
Sbjct: 170 AGLVWAVATEDMDTLTFAAPRLARNLMAPKSQDKPVLEFDYDKVLAGLGLTPEQFID--- 226
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
MCIL GCDY I+G+G K A
Sbjct: 227 --MCILCGCDYCDTIRGIGPKTA 247
>gi|332376861|gb|AEE63570.1| unknown [Dendroctonus ponderosae]
Length = 380
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA---LKMPLAKF--TDAK 254
AG TED D L FG+ ++ L F + K+P LK+ L + + +
Sbjct: 169 AGKIYATATEDMDALTFGSDIVLRHL------TFSEARKMPIQEIHLKIVLQELNLSQTE 222
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
F CIL GCDY I+G+G KK+
Sbjct: 223 FIDFCILMGCDYTDSIRGIGPKKS 246
>gi|71028278|ref|XP_763782.1| exonuclease I [Theileria parva strain Muguga]
gi|68350736|gb|EAN31499.1| exonuclease I, putative [Theileria parva]
Length = 550
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSG 229
G AD+ I+EDSDL+V+G KII+KL+ G
Sbjct: 175 TGIADFAISEDSDLIVYGCPKIIFKLNKEG 204
>gi|156084190|ref|XP_001609578.1| Rad2 endonuclease [Babesia bovis T2Bo]
gi|154796830|gb|EDO06010.1| Rad2 endonuclease, putative [Babesia bovis]
Length = 1002
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCC---FMDREKLPSALKMPLAKFTDAK 254
N G VI++DSD L FGAK++ +K SGN DR ++ L + +
Sbjct: 715 NNTGLCFGVISDDSDTLAFGAKRV-FKNFYSGNVFEVYVADR----ILHELGLGR---NE 766
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYA 300
+ IL GCDY G++G+G+ A + + + P F++ E+ ++A
Sbjct: 767 IALLAILCGCDYTPGVRGIGVVNALEVIKAF--PTFDDLYEFRRWA 810
>gi|343427426|emb|CBQ70953.1| probable DNA repair endonuclease rad2 [Sporisorium reilianum SRZ2]
Length = 374
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCF----MDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L FG ++ L S +D K L+M + +F D +CIL G
Sbjct: 178 SEDMDTLTFGTPILLKHLTASEQKKLPVHQVDLPKALEGLQMSMPQFID-----LCILLG 232
Query: 264 CDYWTGIKGMGLKKA 278
CDY IKG+G K A
Sbjct: 233 CDYLDPIKGIGPKTA 247
>gi|222445719|ref|ZP_03608234.1| hypothetical protein METSMIALI_01361 [Methanobrevibacter smithii
DSM 2375]
gi|222435284|gb|EEE42449.1| XPG I-region [Methanobrevibacter smithii DSM 2375]
Length = 187
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLS---GNCCFMDREKL 239
A EG + + + E G A V ++D D L+FGAK+++ L ++ GN + + +++
Sbjct: 9 AYGEGEAQAAYLVEN---GDAWAVASQDYDCLLFGAKRVVRNLAINSNLGNLEYYNLKRV 65
Query: 240 PSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
L + + D M IL G D+ G+KG+G K A
Sbjct: 66 LDELDINREQLID-----MGILIGTDFSEGLKGVGAKTA 99
>gi|18977786|ref|NP_579143.1| flap endonuclease-1 [Pyrococcus furiosus DSM 3638]
gi|397651906|ref|YP_006492487.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
gi|28380014|sp|O93634.1|FEN_PYRFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|6980604|pdb|1B43|A Chain A, Fen-1 From P. Furiosus
gi|6980605|pdb|1B43|B Chain B, Fen-1 From P. Furiosus
gi|4102602|gb|AAD01514.1| endo/exonuclease [Pyrococcus furiosus DSM 3638]
gi|18893531|gb|AAL81538.1| flap structure-specific endonuclease [Pyrococcus furiosus DSM 3638]
gi|393189497|gb|AFN04195.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
Length = 340
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPS-----ALKMPL---------AKFTDA 253
++D D L+FGA +++ L ++G + KLP +K L K T
Sbjct: 171 SQDYDSLLFGAPRLVRNLTITG------KRKLPGKNVYVEIKPELIILEEVLKELKLTRE 224
Query: 254 KFRYMCILSGCDYWTG-IKGMGLKKAKDYVFSIMDP 288
K + IL G DY G IKG+GLKKA + V DP
Sbjct: 225 KLIELAILVGTDYNPGGIKGIGLKKALEIVRHSKDP 260
>gi|410076602|ref|XP_003955883.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
gi|372462466|emb|CCF56748.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
Length = 988
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGN-CCFMDREKLPSALKMPLAKFTDAKFRYMC 259
G D +IT+DSD+ +FG K+ L F + + + +L + K + +
Sbjct: 760 GLVDGIITDDSDVFLFGGTKVYKNLFQDKKYVEFYNYDTIEKSLGIDRKKMIE-----LA 814
Query: 260 ILSGCDYWTGIKGMG 274
+L G DY TGIKGMG
Sbjct: 815 LLLGSDYTTGIKGMG 829
>gi|318055766|ref|NP_001187811.1| flap endonuclease 1-b [Ictalurus punctatus]
gi|308324033|gb|ADO29152.1| flap endonuclease 1-b [Ictalurus punctatus]
Length = 380
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMC 259
AG A TED D L FG ++ L S +E S + ++ + +F +C
Sbjct: 169 AGKAYATATEDMDGLTFGTSVLLRHLTASEAKKLSIQEFHFSRVLQEMS-LSHQQFIDLC 227
Query: 260 ILSGCDYWTGIKGMGLKKAKDYV 282
IL GCDY IKG+G K+A D +
Sbjct: 228 ILLGCDYCGTIKGIGPKRAIDLI 250
>gi|410083313|ref|XP_003959234.1| hypothetical protein KAFR_0J00310 [Kazachstania africana CBS 2517]
gi|372465825|emb|CCF60099.1| hypothetical protein KAFR_0J00310 [Kazachstania africana CBS 2517]
Length = 675
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYK----------LDLSGNC---- 231
EG + VT++ + DYV + DSD+L+FG K++ +++G+
Sbjct: 118 EGEAYCCWVTKQ-LNDQLDYVWSNDSDVLLFGGMKVLKNYSRFVNDIGVTNVNGDTNEKN 176
Query: 232 -----CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIM 286
F+D ++L KM + + +L G DY G+KG+G K V +
Sbjct: 177 HENLITFVDYDELTRKHKM----LNRERLLFYSVLLGADYNQGVKGLGKDKCLKIV-QLT 231
Query: 287 DPDFENR 293
+PDF R
Sbjct: 232 NPDFAMR 238
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 91 CFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFE 150
F+D ++L KM + + +L G DY G+KG+G K V + +PDF
Sbjct: 182 TFVDYDELTRKHKM----LNRERLLFYSVLLGADYNQGVKGLGKDKCLKIV-QLTNPDF- 235
Query: 151 NALRKINVYG--------KIGSYVKITKEFLT---SGAPQPFGARNEGRSLLSAVTERNI 199
A+R N++ K Y+K K+ + + FG RN ++LLSA + N
Sbjct: 236 -AMRFYNIFSNTRSNDSTKTSKYIKFQKDLFAYCQKNSVELFG-RNYSKTLLSAERD-NF 292
Query: 200 AGY 202
G+
Sbjct: 293 EGW 295
>gi|403358237|gb|EJY78757.1| Flap endonuclease 1-1 [Oxytricha trifallax]
Length = 967
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMC 259
G A +ED D L FG K ++ + +D E++ M +F D +C
Sbjct: 175 GLAFATASEDMDSLTFGTKVLLRGFNSKKEPIIQIDLEEVLEGFMMNHDQFID-----LC 229
Query: 260 ILSGCDYWTGIKGMGLKKAKDYV 282
IL GCDY T I G+G KA Y+
Sbjct: 230 ILCGCDYTTSITGIGPIKAYQYL 252
>gi|224050601|ref|XP_002192880.1| PREDICTED: flap endonuclease 1 [Taeniopygia guttata]
Length = 386
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAK 249
AG TED D L FG+ ++ L S + +KLP L++ +
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------ETKKLPIQEFHLNRILQDLQLTWEQ 222
Query: 250 FTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
F D +CIL GCDY I+G+G K+A + +
Sbjct: 223 FVD-----LCILLGCDYCASIRGIGPKRAVELI 250
>gi|299742046|ref|XP_001832210.2| hypothetical protein CC1G_02472 [Coprinopsis cinerea okayama7#130]
gi|298405004|gb|EAU89583.2| hypothetical protein CC1G_02472 [Coprinopsis cinerea okayama7#130]
Length = 250
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N+ G DYV+T D D+ +FGA +I + N ++ +P+ + + A +
Sbjct: 148 NLTGQIDYVLTSDVDVFIFGATSVIRRPLNKDNYDEVEIYHVPTLQAYERVRLSRAGLIF 207
Query: 258 MCILSGCDY-WTGIKGMGLKKA 278
+ I G DY G+KG ++ A
Sbjct: 208 IAIFGGGDYDPDGLKGFTVESA 229
>gi|301117906|ref|XP_002906681.1| flap endonuclease 1 [Phytophthora infestans T30-4]
gi|317374909|sp|D0MY34.1|FEN1_PHYIT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|262108030|gb|EEY66082.1| flap endonuclease 1 [Phytophthora infestans T30-4]
Length = 389
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGN----CCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
TED D L FG + +L +S + E+ L+M +F D +CIL G
Sbjct: 183 TEDMDALTFGVPVLYRRLTVSPAKKIPILEIRLERALQELEMTHEQFVD-----LCILCG 237
Query: 264 CDYWTGIKGMGLKKA 278
CDY I+G+G KKA
Sbjct: 238 CDYCDSIRGVGPKKA 252
>gi|443894995|dbj|GAC72341.1| hypothetical protein PANT_7d00055 [Pseudozyma antarctica T-34]
Length = 373
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCF----MDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L FG ++ L S +D K L+M + +F D +CIL G
Sbjct: 178 SEDMDTLTFGTPILLKHLTASEQKKLPVHQVDLPKALEGLQMDMPQFID-----LCILLG 232
Query: 264 CDYWTGIKGMGLKKA 278
CDY IKG+G K A
Sbjct: 233 CDYLDPIKGIGPKTA 247
>gi|392591810|gb|EIW81137.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 437
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKLDLS----GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L F A ++ L S + E+ L+M +++F D +CIL G
Sbjct: 209 SEDMDTLTFHAPVLLRHLTFSEAKKAPISEIHLERALQGLEMDMSQFID-----LCILLG 263
Query: 264 CDYWTGIKGMGLKKA 278
CDY IKG+G K A
Sbjct: 264 CDYLEPIKGVGPKSA 278
>gi|18405624|ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog;
AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
AltName: Full=XPG homolog
gi|13649704|gb|AAK37472.1| UV hypersensitive protein [Arabidopsis thaliana]
gi|332643872|gb|AEE77393.1| DNA repair protein UVH3 [Arabidopsis thaliana]
Length = 1479
Score = 40.0 bits (92), Expect = 2.5, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKFRYMCI 260
D ++T+DSD+ +FGA+ + + F DR+ + + + K + K M +
Sbjct: 961 DGIVTDDSDVFLFGARSVYKNI-------FDDRKYVETYFMKDIEKELGLSRDKIIRMAM 1013
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVK 298
L G DY GI G+G+ A + V + + D + +E+V+
Sbjct: 1014 LLGSDYTEGISGIGIVNAIEVVTAFPEEDGLQKFREWVE 1052
>gi|164662529|ref|XP_001732386.1| hypothetical protein MGL_0161 [Malassezia globosa CBS 7966]
gi|159106289|gb|EDP45172.1| hypothetical protein MGL_0161 [Malassezia globosa CBS 7966]
Length = 150
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 21/77 (27%)
Query: 212 DLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRYMCIL 261
D L FGA ++ L S +++KLP L MP+ +F D +C+L
Sbjct: 2 DTLTFGAPILLKNLTAS------EQKKLPVTEVHLGKALEELDMPMEQFVD-----LCML 50
Query: 262 SGCDYWTGIKGMGLKKA 278
GCDY ++G+G KKA
Sbjct: 51 LGCDYLDPVRGVGPKKA 67
>gi|11994123|dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]
Length = 1522
Score = 40.0 bits (92), Expect = 2.5, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKFRYMCI 260
D ++T+DSD+ +FGA+ + + F DR+ + + + K + K M +
Sbjct: 1001 DGIVTDDSDVFLFGARSVYKNI-------FDDRKYVETYFMKDIEKELGLSRDKIIRMAM 1053
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVK 298
L G DY GI G+G+ A + V + + D + +E+V+
Sbjct: 1054 LLGSDYTEGISGIGIVNAIEVVTAFPEEDGLQKFREWVE 1092
>gi|209879882|ref|XP_002141381.1| Flap endonuclease 1 [Cryptosporidium muris RN66]
gi|317374886|sp|B6AFP1.1|FEN1_CRYMR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|209556987|gb|EEA07032.1| Flap endonuclease 1, putative [Cryptosporidium muris RN66]
Length = 472
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 24/103 (23%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLS--------GNC----CFMDREKLPSALKMPLAKFTDA 253
V TED+D L FG +I L+ S GN + + S L + + +F D
Sbjct: 177 VATEDADSLTFGTPLVIRHLNFSDGKFSDSKGNSKNSLQVIKLSTVLSDLGLSMQQFVD- 235
Query: 254 KFRYMCILSGCDYWTGIKGMG-------LKKAKDYVFSIMDPD 289
+CIL GCDY I+G+G LKK KD I + D
Sbjct: 236 ----LCILCGCDYCGTIRGIGALTAYKLLKKHKDIETIINELD 274
>gi|405953608|gb|EKC21238.1| Flap endonuclease 1-A [Crassostrea gigas]
Length = 376
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAKFR 256
TED D L FG ++ L ++ A K+P+ ++ T +F
Sbjct: 177 TEDMDALTFGTTVLLRNLTVA------------EARKLPIKEYYYNRVLEELGLTKDEFI 224
Query: 257 YMCILSGCDYWTGIKGMGLKKAKDYV 282
+CIL GCDY I+G+G K+A D +
Sbjct: 225 DLCILLGCDYCDSIRGIGPKRAIDLI 250
>gi|242041837|ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
gi|241922167|gb|EER95311.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
Length = 1489
Score = 39.7 bits (91), Expect = 2.7, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 255
I D V+T+DSD+ +FGA+ + + F DR+ + + + T +
Sbjct: 900 INNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYVETYFMKDIESELGLTREQL 952
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVK 298
M +L G DY G+ G+G+ A + V + + D + KE+++
Sbjct: 953 IRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQKFKEWIE 996
>gi|156093472|ref|XP_001612775.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801649|gb|EDL43048.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1247
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC 231
GY I+EDSDLLV+G +++YKL +G C
Sbjct: 193 GYISCAISEDSDLLVYGCPRVLYKLKSTGEC 223
>gi|312082398|ref|XP_003143428.1| flap endonuclease-1 [Loa loa]
gi|307761410|gb|EFO20644.1| flap endonuclease-1 [Loa loa]
Length = 345
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE-KLPSALK---MPLAKFTDAKF 255
AG ++ED D L FG+ ++ ++ S +E L LK M + +F D
Sbjct: 169 AGKVFATVSEDMDALTFGSPILLRQMIASEAKKLPVKEMNLNQVLKDFGMNMEQFID--- 225
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY + I+G+G KKA
Sbjct: 226 --LCILLGCDYVSTIRGIGPKKA 246
>gi|308806964|ref|XP_003080793.1| FEN-1 (ISS) [Ostreococcus tauri]
gi|116059254|emb|CAL54961.1| FEN-1 (ISS) [Ostreococcus tauri]
Length = 428
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
AG V TED D L F A ++ L D EK + L + +F D
Sbjct: 209 AGLVWAVGTEDMDTLTFAAPRVARNLMAPKSAEKPVLEFDYEKTIAGLGLTADQFID--- 265
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY I+G+G K A
Sbjct: 266 --LCILCGCDYTDTIRGVGPKTA 286
>gi|317374922|sp|Q013G9.2|FEN1_OSTTA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 389
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
AG V TED D L F A ++ L D EK + L + +F D
Sbjct: 170 AGLVWAVGTEDMDTLTFAAPRVARNLMAPKSAEKPVLEFDYEKTIAGLGLTADQFID--- 226
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY I+G+G K A
Sbjct: 227 --LCILCGCDYTDTIRGVGPKTA 247
>gi|13506617|gb|AAK01853.1| flap endonuclease-1 [Mus musculus]
Length = 378
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 167 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRVLQEL 214
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+F +CIL G DY I+G+G K+A D +
Sbjct: 215 GLNQEQFVDLCILLGSDYCESIRGIGAKRAVDLI 248
>gi|124485183|ref|YP_001029799.1| flap endonuclease-1 [Methanocorpusculum labreanum Z]
gi|166973701|sp|A2SQC6.1|FEN_METLZ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|124362724|gb|ABN06532.1| flap endonuclease 1 [Methanocorpusculum labreanum Z]
Length = 333
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 143 SIMDPDFENALRKINVYGKIGSYV-KITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAG 201
++ + D E+A + KI +++ +KE L++ A EG + S +T+ G
Sbjct: 109 ALKEGDEESARKYAMASSKIDAFIIDSSKELLSALGIAWIQAPEEGEAQSSFMTKN---G 165
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGN--------CCFMDREKLPSALKMPLAKFTDA 253
Y +++D D L+FGA ++ + +SG + +R +L L T
Sbjct: 166 DVTYAVSQDYDSLLFGAPDLVRNITVSGKKRIRGKVLSVYPERLRLEEVLTG--LSVTQE 223
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKA 278
+ + +L G DY +G+ G+G K A
Sbjct: 224 ELIQIALLIGTDYNSGVPGVGPKTA 248
>gi|320167228|gb|EFW44127.1| DNA-repair protein rad13 [Capsaspora owczarzaki ATCC 30864]
Length = 1235
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGN--CCFMDREKLPSALKMPLAKFTDAKF 255
++AG D ITEDSD+ +FGA++ +Y+ + N F + S L + K D
Sbjct: 919 DLAGITDGTITEDSDVFLFGARR-VYRNFFNPNKYAEFYASSAIESYLALDREKLID--- 974
Query: 256 RYMCILSGCDYWTGIKGMG 274
+ +L G DY +G++ +G
Sbjct: 975 --LALLLGSDYTSGVERIG 991
>gi|91085979|ref|XP_971921.1| PREDICTED: similar to flap endonuclease-1 [Tribolium castaneum]
gi|270009935|gb|EFA06383.1| hypothetical protein TcasGA2_TC009261 [Tribolium castaneum]
Length = 381
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 23/82 (28%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FR 256
TED D L FG+ ++ L S A KMP+ + +K F
Sbjct: 177 TEDMDALTFGSNVLLRHLTFS------------EARKMPVQEIHLSKVLEGLELDQKAFV 224
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY I+G+G K+A
Sbjct: 225 DLCILLGCDYTESIRGIGPKRA 246
>gi|729476|sp|P39749.1|FEN1_MOUSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|499649|gb|AAC37664.1| endonuclease-1 [Mus musculus]
Length = 378
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 167 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRVLQEL 214
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+F +CIL G DY I+G+G K+A D +
Sbjct: 215 GLNQEQFVDLCILLGSDYCESIRGIGAKRAVDLI 248
>gi|388583596|gb|EIM23897.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 433
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 21/81 (25%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRY 257
+ED D L FGA ++ L F +++K P + L+M +FTD
Sbjct: 178 SEDMDTLTFGAPILLRHL------TFSEQKKEPISHYYLEEALTGLEMGREQFTD----- 226
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY +KG+G A
Sbjct: 227 LCILLGCDYLEPVKGVGPSTA 247
>gi|429964650|gb|ELA46648.1| hypothetical protein VCUG_01874 [Vavraia culicis 'floridensis']
Length = 720
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 25/108 (23%)
Query: 204 DYVITEDSDLLVFGAKKI---------IYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK 254
D VITED+D+ +FGA +I +Y + N ++RE L
Sbjct: 576 DAVITEDNDVFLFGASRIYKDYFRGPKLYTMQNIKNKLNLEREDLIK------------- 622
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKV 302
+ + G DY GI+G+G KKA + + ++ R ++YAKV
Sbjct: 623 ---LSVFMGNDYTVGIRGIGPKKALEILKCESKTSYDQRIFNLEYAKV 667
>gi|75775305|gb|AAI05256.1| Flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRILQEL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+F +CIL G DY I+G+G K+A D +
Sbjct: 217 GLNQEQFVDLCILLGSDYCESIRGIGPKRAMDLI 250
>gi|294909525|ref|XP_002777787.1| hypothetical protein Pmar_PMAR008722 [Perkinsus marinus ATCC 50983]
gi|239885749|gb|EER09582.1| hypothetical protein Pmar_PMAR008722 [Perkinsus marinus ATCC 50983]
Length = 937
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFM-DREKLPSALKMPLAKFTDAKFRYMC 259
G AD VI++DSD L++GA+ ++ +L M ++P L+ A + +
Sbjct: 793 GLADGVISDDSDTLMYGAEVVLRRLYFDAMYVEMYSSSRMPDRLRDHDAMVS------LA 846
Query: 260 ILSGCDYWTGIKGMG 274
+L GCDY G+ G+G
Sbjct: 847 MLLGCDYTPGVLGIG 861
>gi|168066677|ref|XP_001785260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374868|sp|A9U328.1|FEN12_PHYPA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|162663130|gb|EDQ49912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 206 VITEDSDLLVFGAKKIIYKL--DLSGNCCFM--DREKLPSALKMPLAKFTDAKFRYMCIL 261
V +ED D L FG+ + + L +S M D K+ L + + +F D +CIL
Sbjct: 176 VASEDMDSLTFGSTRFLRHLMEPVSRKLPVMEFDMNKVLEGLSLTMDQFVD-----LCIL 230
Query: 262 SGCDYWTGIKGMGLKKA 278
GCDY I+G+G + A
Sbjct: 231 CGCDYIDTIRGIGAQTA 247
>gi|78042574|ref|NP_001030285.1| flap endonuclease 1 [Bos taurus]
gi|61553249|gb|AAX46374.1| flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRILQEL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+F +CIL G DY I+G+G K+A D +
Sbjct: 217 GLNQEQFVDLCILLGSDYCESIRGIGPKRAMDLI 250
>gi|393232393|gb|EJD39975.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 400
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 13/81 (16%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA------KFRYMCIL 261
+ED D L FGA I+Y+ + F + +K P + ++ L K D +F +C+L
Sbjct: 178 SEDMDTLTFGAP-ILYR-----HLTFSEAKKQPIS-EIDLQKALDGLNMTMDQFIELCLL 230
Query: 262 SGCDYWTGIKGMGLKKAKDYV 282
GCDY IKG+G K A Y+
Sbjct: 231 LGCDYLEPIKGVGPKSALKYM 251
>gi|392585015|gb|EIW74356.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 285
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 183 ARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSA 242
A E + L+A++ N+ D V+T DSD+++FGAK +I +L S + ++ +
Sbjct: 38 APGEAEAELAAMSCHNLL---DGVLTTDSDVILFGAKHVIRELPESDGNKRSHQVEIFTE 94
Query: 243 LKMPLAKFTDAKFRYMCILSGCDY-WTGIKGMGLKKA 278
+ + + + + +LSG DY +G++G G+K A
Sbjct: 95 ESIRKSGWDCHRLLLVALLSGADYDMSGVQGCGIKVA 131
>gi|299742372|ref|XP_001832419.2| hypothetical protein CC1G_07679 [Coprinopsis cinerea okayama7#130]
gi|298405154|gb|EAU89453.2| hypothetical protein CC1G_07679 [Coprinopsis cinerea okayama7#130]
Length = 516
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKM 245
EG L S++ + G AD+V++ED+D+LV+GA + + + + + L++
Sbjct: 333 EGEGLASSIV---LHGDADFVVSEDTDVLVYGAPLLRNLTSMHEPLEIICSQTIRQCLEL 389
Query: 246 PLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
F D +L G D+ IK +G +A +V
Sbjct: 390 DPVSFLD-----FALLLGTDFTQRIKNVGPARALQFV 421
>gi|357113521|ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824635 [Brachypodium
distachyon]
Length = 1460
Score = 39.7 bits (91), Expect = 3.5, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 255
I D V+T+DSD+ +FGA+ + + F DR+ + + + T +
Sbjct: 899 INNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYVETYFMKDIESELGLTRDQL 951
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVK 298
M +L G DY GI G+G+ A + V + + D + +E+++
Sbjct: 952 IRMALLLGSDYTEGISGIGIVNAIEVVHAFSEEDGLQKFREWIE 995
>gi|49619155|gb|AAT68162.1| flap structure specific endonuclease 1 [Danio rerio]
Length = 380
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVYATATEDMAGLTFGTTVLLRHLTAS------------EAKKLPIQEFHFSRILQDM 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY IKG+G K+A D +
Sbjct: 217 ELTHQQFIDLCILLGCDYCGTIKGIGPKRAIDLI 250
>gi|17510005|ref|NP_491168.1| Protein CRN-1 [Caenorhabditis elegans]
gi|75023012|sp|Q9N3T2.1|FEN1_CAEEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
gi|31747251|gb|AAP57297.1| cell death-related nuclease 1 [Caenorhabditis elegans]
gi|373220153|emb|CCD72553.1| Protein CRN-1 [Caenorhabditis elegans]
Length = 382
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDA------ 253
AG +TED D L FG+ ++ F+ P A K+P+ +F +
Sbjct: 169 AGKVFGTVTEDMDALTFGSTVLLRH--------FL----APVAKKIPIKEFNLSLALEEM 216
Query: 254 -----KFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+F +CIL GCDY I+G+G KKA + +
Sbjct: 217 KLSVEEFIDLCILLGCDYCGTIRGVGPKKAVELI 250
>gi|70953099|ref|XP_745672.1| DNA repair endonuclease [Plasmodium chabaudi chabaudi]
gi|56526070|emb|CAH76802.1| DNA repair endonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 1281
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL-----PSALKMPLAKFTD 252
N Y D +I++DSD++VF K II F +++K + ++ L + D
Sbjct: 987 NNNNYCDAIISDDSDVIVFSGKTIIKN--------FFNKKKTVEVYEKNLIERKLGLYQD 1038
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ +L GCDY G+ G+G+ A + V
Sbjct: 1039 DLIN-ISMLCGCDYTVGVHGIGIVNALEVV 1067
>gi|2674207|gb|AAB88707.1| flap endonuclease 1 [Xenopus laevis]
gi|115528353|gb|AAI24978.1| Fen1-A protein [Xenopus laevis]
Length = 382
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDALTFGTPVLLRHLTAS------------EAKKLPIQEFHLNRVIQDI 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL G DY I+G+G K+A D +
Sbjct: 217 GITHEQFVDLCILLGSDYCETIRGIGPKRAIDLI 250
>gi|148230426|ref|NP_001080960.1| flap endonuclease 1-A [Xenopus laevis]
gi|82071385|sp|P70040.1|FEN1A_XENLA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A;
Short=xFEN-1a
gi|1490870|gb|AAB06176.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|4106358|gb|AAD02814.1| flap endonuclease 1 [Xenopus laevis]
gi|213623454|gb|AAI69765.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|213625072|gb|AAI69761.1| 5' nuclease xFEN1a [Xenopus laevis]
Length = 382
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDALTFGTPVLLRHLTAS------------EAKKLPIQEFHLNRVIQDI 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL G DY I+G+G K+A D +
Sbjct: 217 GITHEQFVDLCILLGSDYCETIRGIGPKRAIDLI 250
>gi|444513068|gb|ELV10260.1| Flap endonuclease 1 [Tupaia chinensis]
Length = 380
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S A K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------EAKKLPIQEFHLSRILQEL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
+ +F +CIL G DY I+G+G K+A D +
Sbjct: 217 GLSQEQFVDLCILLGSDYCESIRGIGPKRAVDLI 250
>gi|343471550|emb|CCD16055.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK-----MPLAKFTDAKFRYMCI 260
V TED D L FGA+ ++ L + + +K P A + LA T +F +CI
Sbjct: 219 VGTEDMDALAFGARVMLRHL------TYGEAKKRPIAEYHLEDILELAGMTMEQFIDLCI 272
Query: 261 LSGCDYWTGIKGMGLKKA 278
L GCDY I G+G KA
Sbjct: 273 LLGCDYVPKIPGIGPHKA 290
>gi|68076243|ref|XP_680041.1| DNA repair endonuclease [Plasmodium berghei strain ANKA]
gi|56500911|emb|CAH98970.1| DNA repair endonuclease, putative [Plasmodium berghei]
Length = 1262
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL-----PSALKMPLAKFTD 252
N Y D +I++DSD++VF K II F +++K + ++ L + D
Sbjct: 969 NNNNYCDAIISDDSDVIVFSGKTIIKN--------FFNKKKTVEVYEKNLIERKLGLYQD 1020
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKA 278
+ +L GCDY G+ G+G+ A
Sbjct: 1021 DLIN-ISMLCGCDYTVGVHGVGIVNA 1045
>gi|156555588|ref|XP_001605190.1| PREDICTED: flap endonuclease GEN-like [Nasonia vitripennis]
Length = 736
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIY----------KLDLSGNCCFMDREKLPSALKMPL 247
N G D I++DSD L++GA KI+Y + SG+ EK+ +
Sbjct: 142 NEDGLVDGCISQDSDCLLYGA-KIVYRNFCTSTQGNRTTSSGSIDEYSMEKIQQVFNLGR 200
Query: 248 AKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
K + ++ GCDY G+ G+G K+A +F I+D D
Sbjct: 201 NKMI-----ALALMCGCDYDEGLSGVG-KEAALKLFKIVDDD 236
>gi|326919868|ref|XP_003206199.1| PREDICTED: flap endonuclease 1-like [Meleagris gallopavo]
Length = 381
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------ETKKLPIQEFHLNRILQDL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY I+G+G K+A + +
Sbjct: 217 GLTWEQFVDLCILLGCDYCESIRGIGPKRAVELI 250
>gi|409978729|gb|AFV50340.1| nuclease-VHS inhibit celluar gene expression [Heliothis virescens
ascovirus 3g]
Length = 330
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 204 DYVITEDSDLLVF-GAKKIIYKLDLSGNCCF--MDREKLPSALKMPLAKFTDAKFRYMCI 260
D V + D D+L + G +++Y + L C + +D EKL +K+ +F D CI
Sbjct: 207 DAVYSRDYDMLAYTGVDRVLYSISLP-RCTYTCVDVEKLLRLMKLSREQFID-----FCI 260
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G DY + GM KKA
Sbjct: 261 LCGTDYNKSVPGMHPKKA 278
>gi|387594628|gb|EIJ89652.1| hypothetical protein NEQG_00422 [Nematocida parisii ERTm3]
Length = 503
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMCIL 261
D VITEDSD+L+F K + + R LP + ++T + + L
Sbjct: 325 TDGVITEDSDMLIFSTKPVFRHV--------FKRALLPKVFAEKDTVEYTQTELHILAWL 376
Query: 262 SGCDYWTGIKGMGLKKAKDYV 282
G DY G+ G+G KAK +
Sbjct: 377 LGNDYVPGVSGVGPAKAKQII 397
>gi|387596525|gb|EIJ94146.1| hypothetical protein NEPG_00813 [Nematocida parisii ERTm1]
Length = 503
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 203 ADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL-KMPLAKFTDAKFRYMCIL 261
D VITEDSD+L+F K + + R LP + ++T + + L
Sbjct: 325 TDGVITEDSDMLIFSTKPVFRHV--------FKRALLPKVFAEKDTVEYTQTELHILAWL 376
Query: 262 SGCDYWTGIKGMGLKKAKDYV 282
G DY G+ G+G KAK +
Sbjct: 377 LGNDYVPGVSGVGPAKAKQII 397
>gi|297600506|ref|NP_001049313.2| Os03g0205400 [Oryza sativa Japonica Group]
gi|255674294|dbj|BAF11227.2| Os03g0205400 [Oryza sativa Japonica Group]
Length = 1470
Score = 39.3 bits (90), Expect = 4.2, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKFRYMCI 260
D V+T+DSD+ +FGA+ + + F DR+ + + L + T + M +
Sbjct: 892 DGVVTDDSDVFLFGARNVYKNI-------FDDRKYVETYLMKDIESELGLTREQLIRMAM 944
Query: 261 LSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVK 298
L G DY GI G+G+ A + + + D + +E+V+
Sbjct: 945 LLGSDYTEGISGIGIVNAIEVAHAFPEEDGLQKFREWVE 983
>gi|389582322|dbj|GAB64877.1| exonuclease I [Plasmodium cynomolgi strain B]
Length = 1312
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC 231
GY I+EDSDLLV+G +++YKL +G C
Sbjct: 166 GYISCAISEDSDLLVYGCPRVLYKLKSTGEC 196
>gi|148642785|ref|YP_001273298.1| flap endonuclease-1 [Methanobrevibacter smithii ATCC 35061]
gi|166973703|sp|A5UL52.1|FEN_METS3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148551802|gb|ABQ86930.1| DNA repair flap structure-specific 5'-3' endonuclease
[Methanobrevibacter smithii ATCC 35061]
Length = 327
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 166 VKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKL 225
++ +K+ LT A EG + + + E G A V ++D D L+FGAK+++ L
Sbjct: 132 IESSKKLLTMMGIPYIEAYGEGEAQAAYLVEN---GDAWAVASQDYDCLLFGAKRVVRNL 188
Query: 226 DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
++ G+ + + +++ L + + D M IL G D+ G+KG+G K A
Sbjct: 189 AINSNLGDLEYYNLKRVLDELDINREQLID-----MGILIGTDFSEGLKGVGAKTA 239
>gi|134287236|ref|YP_001110932.1| nuclease-VHS inhibit celluar gene expression [Heliothis virescens
ascovirus 3e]
gi|133722144|gb|ABO37266.1| nuclease-VHS inhibit celluar gene expression [Heliothis virescens
ascovirus 3e]
Length = 330
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 204 DYVITEDSDLLVF-GAKKIIYKLDLSGNCCF--MDREKLPSALKMPLAKFTDAKFRYMCI 260
D V + D D+L + G +++Y + L C + +D EKL +K+ +F D CI
Sbjct: 207 DAVYSRDYDMLAYTGVDRVLYSISLP-RCTYTCVDVEKLLRLMKLSREQFID-----FCI 260
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G DY + GM KKA
Sbjct: 261 LCGTDYNKSVPGMHPKKA 278
>gi|406608120|emb|CCH40554.1| Flap endonuclease [Wickerhamomyces ciferrii]
Length = 778
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKII-----YKLDLSGNCCFMDREK------LPSALKMPLAK 249
G DYV++ DSD ++FGA KI+ ++ D M + P L+ ++
Sbjct: 173 GIVDYVLSNDSDSIIFGATKILRNFSKFEDDKPAGASMMKCKSSSYYWVTPIDLRKITSR 232
Query: 250 FTDAKFRYM--CILSGCDYWTGIKGMGLKKAKDYVFS 284
++R + IL G DY G+KG+G ++A S
Sbjct: 233 TGFDQWRVLLYSILVGADYNHGVKGLGSERASQVALS 269
>gi|261349732|ref|ZP_05975149.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
gi|288861687|gb|EFC93985.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
Length = 327
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 166 VKITKEFLTSGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKL 225
++ +K+ LT A EG + + + E G A V ++D D L+FGAK+++ L
Sbjct: 132 IESSKKLLTMMGIPYIEAYGEGEAQAAYLVEN---GDAWAVASQDYDCLLFGAKRVVRNL 188
Query: 226 DLS---GNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 278
++ G+ + + +++ L + + D M IL G D+ G+KG+G K A
Sbjct: 189 AINSNLGDLEYYNLKRVLDELDINREQLID-----MGILIGTDFSEGLKGVGAKTA 239
>gi|393213357|gb|EJC98853.1| PIN domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 403
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 21/81 (25%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRY 257
+ED D L F A I+Y+ + F + +K P L+M +++F D
Sbjct: 178 SEDMDTLTFNAP-ILYR-----HLTFSEAKKQPISEINLQKALEGLEMNMSQFID----- 226
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY IKG+G K A
Sbjct: 227 LCILLGCDYLEPIKGIGPKSA 247
>gi|328773336|gb|EGF83373.1| hypothetical protein BATDEDRAFT_22008 [Batrachochytrium
dendrobatidis JAM81]
Length = 388
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 23/82 (28%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAK-----------FR 256
+ED D L FGA ++ L S A K+P+++F K F
Sbjct: 178 SEDMDTLTFGAPVLLRHLTFS------------EAKKIPISEFNTQKVLEGLNFSHDEFI 225
Query: 257 YMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY I+G+G +A
Sbjct: 226 DLCILLGCDYCDSIRGIGPHRA 247
>gi|82914773|ref|XP_728841.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485391|gb|EAA20406.1| XPG I-region, putative [Plasmodium yoelii yoelii]
Length = 1274
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL-----PSALKMPLAKFTD 252
N Y D +I++DSD++VF K II F +++K + ++ L + D
Sbjct: 959 NNNNYCDAIISDDSDVIVFSGKTIIKN--------FFNKKKTVEVYEKNLIERKLGLYQD 1010
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAI 308
+ +L GCDY G+ G+G+ A + + + P FE+ K ++K PL I
Sbjct: 1011 DLIN-ISMLCGCDYTIGVHGVGIVNALEIIKAF--PTFEDLK-FLKEIVSNPLRHI 1062
>gi|146090657|ref|XP_001466297.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|398017392|ref|XP_003861883.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
gi|317374906|sp|A4I2L4.1|FEN1_LEIIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134070659|emb|CAM69008.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|322500111|emb|CBZ35186.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
Length = 395
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL-----KMPLAKFTDAKF 255
G A V TED D L FG+ ++ L++S D +K P A + + + +F
Sbjct: 174 GKAWAVGTEDMDALTFGSTVMLRHLNIS------DAKKRPIAEIHLDEVLQITGLSMGQF 227
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY + G+G +KA
Sbjct: 228 VDLCILLGCDYVPKVPGIGPQKA 250
>gi|336122204|ref|YP_004576979.1| Flap structure-specific endonuclease [Methanothermococcus
okinawensis IH1]
gi|334856725|gb|AEH07201.1| Flap structure-specific endonuclease [Methanothermococcus
okinawensis IH1]
Length = 324
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 180 PF-GARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCC-FMDRE 237
PF A +EG + S + ++ G V+++D D L++GA + + + S ++ +
Sbjct: 145 PFINAPSEGEAQCSYMAKK---GDVYAVVSQDYDALLYGAPRTVRNITASNKPLELIELD 201
Query: 238 KLPSALKMPLAKFTDAKFRYMCILSGCDYWTG-IKGMGLKKAKDYV 282
++ AL + L D M IL G DY G +KG+G KKA D V
Sbjct: 202 EVLGALNITLDNLID-----MAILIGTDYNIGGVKGIGPKKALDIV 242
>gi|307102466|gb|EFN50740.1| hypothetical protein CHLNCDRAFT_37697 [Chlorella variabilis]
Length = 389
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 25/85 (29%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLA------------KFTDA 253
+ TED D L FG K+I L PS+ K PLA + T+
Sbjct: 176 ISTEDMDSLTFGTPKLIRHL------------MAPSSQK-PLAMEFDHELVLKELELTED 222
Query: 254 KFRYMCILSGCDYWTGIKGMGLKKA 278
+F +CIL GCDY I G+G +A
Sbjct: 223 QFIDLCILCGCDYTAKISGIGAVRA 247
>gi|317374875|sp|C3KJE6.1|FEN1_ANOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229367576|gb|ACQ58768.1| Flap endonuclease 1-A [Anoplopoma fimbria]
Length = 380
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG ++ L S A K+P+ +
Sbjct: 169 AGKVFATATEDMDGLTFGTNVLLRHLTAS------------EAKKLPIQELHYSRILQDI 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T+ +F +CI GCDY IKG+G K+A D +
Sbjct: 217 GLTNEQFIDLCIPLGCDYCGTIKGIGPKRAIDLI 250
>gi|402466077|gb|EJW01645.1| hypothetical protein EDEG_03812 [Edhazardia aedis USNM 41457]
Length = 856
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRY 257
+ D VITED+D+ +FG KKI +G N D ++ + +
Sbjct: 671 LKNIVDAVITEDNDIFLFGGKKIYRNYFKNGKNIDLYDINEIKKIISRD-------EMIM 723
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYV 282
+ ++ G DY GIKG GLKK+ D +
Sbjct: 724 ISLILGSDYCDGIKGFGLKKSLDLI 748
>gi|256064183|ref|XP_002570412.1| flap endonuclease-1 [Schistosoma mansoni]
Length = 241
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 23/88 (26%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF-----------TDAK 254
V TED D L FG ++ L S A KM + +F T +
Sbjct: 28 VGTEDMDALAFGTPVLLRHLTFS------------EARKMAIQEFNLTSVLEGLGLTMDQ 75
Query: 255 FRYMCILSGCDYWTGIKGMGLKKAKDYV 282
F +CIL GCDY I+G+G KKA D +
Sbjct: 76 FIDLCILLGCDYVDTIRGIGPKKALDLL 103
>gi|170111324|ref|XP_001886866.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638224|gb|EDR02503.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 446
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
GY D V +EDSDL+V GA ++ N + + K FTD F + +
Sbjct: 17 GYIDAVASEDSDLIVLGAVVVLRNFLHEDNDEKVTVYCAEAIRKHAALGFTDTDFLVIAL 76
Query: 261 LSGCDYWTGIKGMGLKKA 278
L G DY G+K G++ A
Sbjct: 77 LVGGDYDDGLKRCGIRIA 94
>gi|427786261|gb|JAA58582.1| Putative xp-g/rad2 dna repair endonuclease [Rhipicephalus
pulchellus]
Length = 778
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTD------AKFRY 257
D IT+D D ++GAK + KL C D++ P L ++ K
Sbjct: 3 DGCITQDGDAFLYGAKTVYRKL------CVEDKD--PHVLSYKISDIESKLGLDREKLVA 54
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+ +L+GCDY++G++ +G + A
Sbjct: 55 LAVLAGCDYFSGVRNVGKETA 75
>gi|167540341|ref|XP_001733568.1| exonuclease [Entamoeba dispar SAW760]
gi|165893425|gb|EDR21682.1| exonuclease, putative [Entamoeba dispar SAW760]
Length = 258
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 22 VNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKR 61
VN ++Y+ HKI I VFDG LP+K+ EE+R KR
Sbjct: 56 VNGMLEYLKFFNIHKIIPIFVFDGATLPSKKLIEEERLKR 95
>gi|449283444|gb|EMC90086.1| Flap endonuclease 1 [Columba livia]
Length = 382
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKF--------- 250
AG TED D L FG+ ++ L S K+P+ +F
Sbjct: 169 AGKVYAAATEDMDCLTFGSPVLMRHLTAS------------ETKKLPIQEFHLNRILQDL 216
Query: 251 --TDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
T +F +CIL GCDY I+G+G K+A + +
Sbjct: 217 GLTWEQFVDLCILLGCDYCESIRGIGPKRAVELI 250
>gi|363539876|ref|YP_004894560.1| mg509 gene product [Megavirus chiliensis]
gi|350611041|gb|AEQ32485.1| putative endonuclease of the xpg family [Megavirus chiliensis]
Length = 443
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 19/86 (22%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK------LPSALK---MPLAKFTD 252
Y V ++DSD+L GA + + FM + K L + LK + + +FTD
Sbjct: 184 YVTGVCSDDSDMLALGAPYLFKDM-----LKFMTKNKDVTVISLRTTLKSTGLTMRQFTD 238
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKA 278
+C+L GCDY IKG+G K A
Sbjct: 239 -----LCVLLGCDYCDNIKGIGPKTA 259
>gi|448825476|ref|YP_007418407.1| putative endonuclease of the xpg family [Megavirus lba]
gi|444236661|gb|AGD92431.1| putative endonuclease of the xpg family [Megavirus lba]
Length = 443
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 19/86 (22%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREK------LPSALK---MPLAKFTD 252
Y V ++DSD+L GA + + FM + K L + LK + + +FTD
Sbjct: 184 YVTGVCSDDSDMLALGAPYLFKDM-----LKFMTKNKDVTVISLRTTLKSTGLTMRQFTD 238
Query: 253 AKFRYMCILSGCDYWTGIKGMGLKKA 278
+C+L GCDY IKG+G K A
Sbjct: 239 -----LCVLLGCDYCDNIKGIGPKTA 259
>gi|414865352|tpg|DAA43909.1| TPA: hypothetical protein ZEAMMB73_723390 [Zea mays]
Length = 1531
Score = 38.5 bits (88), Expect = 6.9, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAK---FTDAKF 255
I D V+T+DSD+ +FGA+ + + F DR+ + + + + +
Sbjct: 947 INNLVDGVVTDDSDVFLFGARNVYKNI-------FDDRKYVETYFMKDIESELGLSREQL 999
Query: 256 RYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD-FENRKEYVK 298
M +L G DY G+ G+G+ A + V + + D + KE+++
Sbjct: 1000 IRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQKFKEWIE 1043
>gi|403347702|gb|EJY73284.1| FEN-1 nuclease [Oxytricha trifallax]
Length = 392
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G A ++ED D L FG+ +I + ++ ++ ++ + + K T +F +CI
Sbjct: 166 GKAFATVSEDMDSLTFGSPFMIRGMSMAKQKAGIELMQIELSKVLFSLKLTYEEFVDLCI 225
Query: 261 LSGCDYWTGIKGMGLKKAKDYV 282
+ GCDY I G+G KA ++
Sbjct: 226 ICGCDYTATITGIGAVKAYKFI 247
>gi|328874795|gb|EGG23160.1| XPG [Dictyostelium fasciculatum]
Length = 308
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 208 TEDSDLLVFGAKKIIYKL---DLSGNCCF-MDREKLPSALKMPLAKFTDAKFRYMCILSG 263
+ED D L FG K ++ L D N + D EKL + FT +F +CIL G
Sbjct: 193 SEDMDSLAFGTKILLRNLTASDQKKNPLWEFDHEKL-----LYGTGFTHDQFIDLCILLG 247
Query: 264 CDYWTGIKGMGLKKA 278
CDY I+G+G +A
Sbjct: 248 CDYCESIRGIGPVRA 262
>gi|224006087|ref|XP_002292004.1| exonuclease [Thalassiosira pseudonana CCMP1335]
gi|317376197|sp|B8C6S5.1|FEN1_THAPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220972523|gb|EED90855.1| exonuclease [Thalassiosira pseudonana CCMP1335]
Length = 390
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYW 267
TED D L F + ++ K+ + N D +++ + + T +F +CIL GCDY
Sbjct: 184 TEDMDALTFRSPVMVRKMTFA-NASKSDVQQIFYDKAIEGLEITHDQFVDLCILLGCDYC 242
Query: 268 TGIKGMGLKKA 278
IKG+G K A
Sbjct: 243 DTIKGIGPKTA 253
>gi|45358876|ref|NP_988433.1| flap endonuclease-1 [Methanococcus maripaludis S2]
gi|45047742|emb|CAF30869.1| flap endonuclease [Methanococcus maripaludis S2]
Length = 324
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 143 SIMDPDFENALRKINVYGKIGSY-----VKITKEFLTSGAPQPFGARNEGRSLLSAVTER 197
S M+ +N L ++ Y K ++ V +K+ L A +EG + + + +
Sbjct: 104 SYMEAKEQNNLEEMQKYAKRANFLDKKTVDNSKKLLELMGIPYVNAPSEGEAQCAELVK- 162
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFR 256
A A VI++D D +++GA+ ++ + S + ++ EK S L + + DA
Sbjct: 163 --ANNAFCVISQDYDSILYGAENVVKNITSSNKDIELIELEKTLSGLNISRDQLIDA--- 217
Query: 257 YMCILSGCDYWTG-IKGMGLKKAKDYV 282
IL G DY G +KG G KKA D V
Sbjct: 218 --AILIGTDYNPGGLKGFGPKKAIDTV 242
>gi|424513647|emb|CCO66269.1| DNA excision repair protein Rad2 [Bathycoccus prasinos]
Length = 1311
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G D V T DSD+ +FGA + + M + S ++ L +
Sbjct: 904 NRTGKVDGVFTNDSDVFLFGATLVFRNAFENTKAIQMYK---SSRIEKQLG-LNRERMIQ 959
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVF 303
+ +L G DY GI G+G+ A + + D D EN E ++ K F
Sbjct: 960 LAMLLGSDYTVGIDGIGIVNAMEVLAGFSDADKENGAESLEGLKQF 1005
>gi|67937671|gb|AAY83298.1| unknown [Babesia sp. WA1]
Length = 954
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAK 254
N +G VI++DSD L FGA++I+ F R L S +K L + +
Sbjct: 673 NQSGEVYAVISDDSDTLPFGARRILKNF-------FNSRVFEIYLSSRIKSELG-LSQEQ 724
Query: 255 FRYMCILSGCDYWTGIKGMGLKKA 278
+ I+ GCDY G+ G+G+ A
Sbjct: 725 LALLAIICGCDYTDGVCGIGIVNA 748
>gi|159905743|ref|YP_001549405.1| flap endonuclease-1 [Methanococcus maripaludis C6]
gi|159887236|gb|ABX02173.1| XPG I domain protein [Methanococcus maripaludis C6]
Length = 324
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGC 264
VI++D D +++GA+ ++ + S + ++ EK S L + L + D + IL G
Sbjct: 169 VISQDYDSILYGAENVVKNITSSNKDIELIELEKTLSELNVSLDQLID-----VAILIGT 223
Query: 265 DYWTG-IKGMGLKKAKDYV 282
DY G +KG G KKA D V
Sbjct: 224 DYNPGGLKGFGPKKAIDTV 242
>gi|403223884|dbj|BAM42014.1| uncharacterized protein TOT_040000390 [Theileria orientalis strain
Shintoku]
Length = 784
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCD 265
VI++DSD LVFGA+ ++ E++ L + + + ++ GCD
Sbjct: 515 VISDDSDALVFGARCLLKNFYNDNVFELYTAERIRKELGIGRKQLA-----LIAVICGCD 569
Query: 266 YWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYA 300
Y G++G+G+ A + + + P FE+ E+ +A
Sbjct: 570 YTNGVRGIGVVNALEVIKAY--PKFEDLHEFKHWA 602
>gi|449283697|gb|EMC90302.1| Flap endonuclease GEN like protein 1, partial [Columba livia]
Length = 542
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G+ D IT D D+ ++GA + ++ ++D + S++K L ++
Sbjct: 78 NAKGHVDGCITNDGDVFLYGAHTVYRNFAMNAKDPYLDCYTM-SSIKETLGCDRES-LIG 135
Query: 258 MCILSGCDYWT-GIKGMGLKKAKDYVFSIMDPD----FENRKEYVKYAKVFPL 305
+ +L GCDY G+ G+G ++A + ++ + FE KE ++Y PL
Sbjct: 136 LAVLLGCDYLPKGVPGVGKEQALKLIDTLQGQNLLQRFEQWKEQLQYDNNPPL 188
>gi|84996925|ref|XP_953184.1| endonuclease (xp-g/RAD2 homologue) [Theileria annulata strain
Ankara]
gi|65304180|emb|CAI76559.1| endonuclease (xp-g/RAD2 homologue), putative [Theileria annulata]
Length = 899
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 29/114 (25%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKII-----------YKLDLSGNCCFMDREKLPSALKMP 246
N +G VI++DSD LVFGAK ++ YKLD + R++L AL
Sbjct: 618 NRSGKCYAVISDDSDSLVFGAKCLLKNFYNDKVFELYKLDRIRRELGIGRKQL--AL--- 672
Query: 247 LAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYA 300
+ I+ GCDY G+KG+G+ A + + + P FE+ ++ +A
Sbjct: 673 -----------IAIICGCDYTNGVKGIGIVNALEVIKAY--PTFEDLYDFRDWA 713
>gi|402218593|gb|EJT98669.1| PIN domain-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 399
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 21/81 (25%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP----------SALKMPLAKFTDAKFRY 257
+ED D L F ++ L F + +K+P L+M ++KF D
Sbjct: 178 SEDMDTLTFNTPILLRHL------TFSEAKKMPISEISLELALEGLEMNMSKFID----- 226
Query: 258 MCILSGCDYWTGIKGMGLKKA 278
+CIL GCDY IKG+G K A
Sbjct: 227 LCILLGCDYLEPIKGIGPKSA 247
>gi|134045325|ref|YP_001096811.1| flap endonuclease-1 [Methanococcus maripaludis C5]
gi|132662950|gb|ABO34596.1| flap endonuclease 1 [Methanococcus maripaludis C5]
Length = 324
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSG-NCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGC 264
VI++D D +++GA+ ++ + S + ++ EK S L + L + D + IL G
Sbjct: 169 VISQDYDSILYGAENVVKNITSSNKDIELIELEKTLSELNVSLDQLID-----VAILIGT 223
Query: 265 DYWTG-IKGMGLKKAKDYV 282
DY G +KG G KKA D V
Sbjct: 224 DYNPGGLKGFGPKKAIDTV 242
>gi|440301029|gb|ELP93476.1| Flap endonuclease, putative [Entamoeba invadens IP1]
Length = 374
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 208 TEDSDLLVFGAKKIIYKLDLSGNCCFMDRE-KLPSALKMPLAKFTDAKFRYMCILSGCDY 266
TED D L G+ ++ K S N RE L S L+ FT F +CIL GCDY
Sbjct: 178 TEDMDALTLGSDIVLRKFSASDNKKEPIREYSLKSILEE--TGFTMDMFIDLCILLGCDY 235
Query: 267 WTGIKGMG 274
IKG+G
Sbjct: 236 CETIKGIG 243
>gi|412993680|emb|CCO14191.1| predicted protein [Bathycoccus prasinos]
Length = 390
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 200 AGYADYVITEDSDLLVFGAKKIIYKL----DLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
AG TED D L F ++I L + D +K+ L + +F D
Sbjct: 170 AGLVHGAATEDMDTLTFACPRLIRNLMAPASQKKDIAEYDFDKVLKGLDLDYDQFID--- 226
Query: 256 RYMCILSGCDYWTGIKGMG 274
+CIL GCDY I+G+G
Sbjct: 227 --LCILCGCDYTDSIRGIG 243
>gi|156082429|ref|XP_001608699.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis T2Bo]
gi|317374876|sp|A7AX58.1|FEN1_BABBO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154795948|gb|EDO05131.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis]
Length = 672
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 16/120 (13%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ V +ED+D LVF ++ L S ++ A + L + T +F CI
Sbjct: 172 GFVTAVGSEDADALVFRCGVLLKNLTASNKPVV----RVDLAKALELLELTHEQFTDFCI 227
Query: 261 LSGCDYWTGIKGMGLKKAKDY------------VFSIMDPDFENRKEYVKYAKVFPLTAI 308
L GCDY +KG+G K A + V S +E +EY + KV +T I
Sbjct: 228 LCGCDYCGTLKGVGPKTAYNLIKKHGSISRILEVRSETLEGYEAAQEYFRDPKVRDITTI 287
>gi|71029044|ref|XP_764165.1| DNA repair protein Rad2 [Theileria parva strain Muguga]
gi|68351119|gb|EAN31882.1| DNA repair protein rad2, putative [Theileria parva]
Length = 835
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKL--DLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
N +G VI++DSD LVFGAK ++ D +DR ++ L +
Sbjct: 557 NRSGKCYAVISDDSDSLVFGAKCLLKNFYNDKVFELYTLDR------IRRELG-IGRKQL 609
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
+ I+ GCDY TG+KG+G+ A
Sbjct: 610 ALIAIICGCDYTTGVKGIGIVNA 632
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.140 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,870,632,316
Number of Sequences: 23463169
Number of extensions: 287508532
Number of successful extensions: 1045141
Number of sequences better than 100.0: 939
Number of HSP's better than 100.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 493
Number of HSP's that attempted gapping in prelim test: 1042734
Number of HSP's gapped (non-prelim): 2487
length of query: 443
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 297
effective length of database: 8,933,572,693
effective search space: 2653271089821
effective search space used: 2653271089821
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)