Your job contains 1 sequence.
>psy11828
MQFIPIIWWKTNLKKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRK
RAEIRHKQKAAELLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL
SGCDYWTGIKGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQP
FGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLP
SALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYA
KVFPLTAILDMKVPAKWYRRIIGSIEVICGFSMATIPFNMKVPAKWYRRIIGSIEVICGF
SMATIPFILAGKAILDMKVPAKWYRRIIGSIEVICGFSMATIPFSTYYLLVCKLDEMILR
KNVQYTPAVIKQSYYYLHQTVKE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11828
(443 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015553 - symbol:tos "tosca" species:7227 "Drosoph... 214 1.9e-27 2
UNIPROTKB|F1S8P2 - symbol:EXO1 "Uncharacterized protein" ... 211 6.8e-24 2
UNIPROTKB|Q9UQ84 - symbol:EXO1 "Exonuclease 1" species:96... 208 2.0e-23 2
UNIPROTKB|E2QWL7 - symbol:EXO1 "Uncharacterized protein" ... 208 2.4e-23 2
UNIPROTKB|E1BF15 - symbol:EXO1 "Uncharacterized protein" ... 209 3.0e-23 2
RGD|1309465 - symbol:Exo1 "exonuclease 1" species:10116 "... 208 1.0e-22 2
MGI|MGI:1349427 - symbol:Exo1 "exonuclease 1" species:100... 208 1.3e-22 2
ZFIN|ZDB-GENE-040426-2828 - symbol:exo1 "exonuclease 1" s... 189 2.2e-22 2
UNIPROTKB|Q9W6K2 - symbol:exo1 "Exonuclease 1" species:83... 195 2.3e-20 2
UNIPROTKB|E1C1G7 - symbol:EXO1 "Uncharacterized protein" ... 201 1.4e-19 2
UNIPROTKB|G4NE19 - symbol:MGG_00841 "Exonuclease 1" speci... 207 5.3e-18 2
DICTYBASE|DDB_G0291570 - symbol:exo1 "5'3'-exonuclease N-... 174 2.8e-17 2
WB|WBGene00009731 - symbol:exo-1 species:6239 "Caenorhabd... 155 8.8e-17 2
TAIR|locus:2013633 - symbol:AT1G29630 species:3702 "Arabi... 177 1.8e-16 2
ASPGD|ASPL0000033989 - symbol:AN3035 species:162425 "Emer... 185 2.2e-16 2
POMBASE|SPBC29A10.05 - symbol:exo1 "exonuclease I Exo1" s... 187 1.2e-15 2
CGD|CAL0003631 - symbol:EXO1 species:5476 "Candida albica... 173 3.1e-12 2
SGD|S000005559 - symbol:EXO1 "5'-3' exonuclease and flap-... 147 8.5e-11 2
TAIR|locus:2194085 - symbol:AT1G18090 species:3702 "Arabi... 135 2.5e-10 2
SGD|S000002671 - symbol:DIN7 "Mitochondrial nuclease func... 138 6.3e-10 2
UNIPROTKB|Q5T399 - symbol:EXO1 "Exonuclease 1" species:96... 141 6.4e-09 1
GENEDB_PFALCIPARUM|PF07_0105 - symbol:PF07_0105 "exonucle... 89 1.0e-07 3
UNIPROTKB|Q8IBK1 - symbol:PF07_0105 "Exonuclease I, putat... 89 1.0e-07 3
GENEDB_PFALCIPARUM|PF10_0080 - symbol:PF10_0080 "endonucl... 124 9.6e-05 1
UNIPROTKB|Q8IJW1 - symbol:PF10_0080 "Endonuclease, putati... 124 9.6e-05 1
FB|FBgn0025832 - symbol:Fen1 "Flap endonuclease 1" specie... 115 0.00019 2
UNIPROTKB|Q5T398 - symbol:EXO1 "Exonuclease 1" species:96... 106 0.00085 1
UNIPROTKB|Q5T397 - symbol:EXO1 "Exonuclease 1" species:96... 106 0.00097 1
>FB|FBgn0015553 [details] [associations]
symbol:tos "tosca" species:7227 "Drosophila melanogaster"
[GO:0008852 "exodeoxyribonuclease I activity" evidence=ISS]
[GO:0004518 "nuclease activity" evidence=NAS] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006084 InterPro:IPR006085 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR019974 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 PROSITE:PS00841
PROSITE:PS00842 SMART:SM00279 SMART:SM00484 SMART:SM00485
GO:GO:0005634 EMBL:AE014134 GO:GO:0046872 GO:GO:0003677
GO:GO:0006298 GO:GO:0006310 eggNOG:COG0258
GeneTree:ENSGT00510000047676 PANTHER:PTHR11081 SUPFAM:SSF47807
KO:K10746 GO:GO:0048256 GO:GO:0045145 EMBL:X89021 EMBL:X89022
EMBL:AY051794 EMBL:BT058042 RefSeq:NP_477145.1 UniGene:Dm.4197
ProteinModelPortal:Q24558 SMR:Q24558 IntAct:Q24558 MINT:MINT-297328
STRING:Q24558 PRIDE:Q24558 EnsemblMetazoa:FBtr0081131 GeneID:35119
KEGG:dme:Dmel_CG10387 UCSC:CG10387-RA CTD:35119 FlyBase:FBgn0015553
InParanoid:Q24558 OMA:LAKACKF OrthoDB:EOG42JM78 PhylomeDB:Q24558
GenomeRNAi:35119 NextBio:791961 Bgee:Q24558 GermOnline:CG10387
GO:GO:0051908 Uniprot:Q24558
Length = 732
Score = 214 (80.4 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N A A Y+ITEDSDL +FGAK II+KLDL+G+ ++ EKL A+ K+ KFR
Sbjct: 159 NRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRR 218
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + G+GL KA ++ D
Sbjct: 219 MCILSGCDYLDSLPGIGLAKACKFILKTEQED 250
Score = 171 (65.3 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 32/58 (55%), Positives = 46/58 (79%)
Query: 20 LYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
+Y+ YC+KY+NMLL++ IK I+VFDG+HLPAK TE+ RR+ + + K++AAELL G
Sbjct: 54 VYIQYCLKYVNMLLSYDIKPILVFDGQHLPAKALTEK-RRRDSRKQSKERAAELLRLG 110
Score = 163 (62.4 bits), Expect = 9.9e-22, Sum P(2) = 9.9e-22
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 74 LHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMG 133
L +II+KLDL+G+ ++ EKL A+ K+ KFR MCILSGCDY + G+G
Sbjct: 176 LFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIG 235
Query: 134 LKKAKDYVFSIMDPDFENALRKINVY 159
L KA ++ D AL+KI Y
Sbjct: 236 LAKACKFILKTEQEDMRIALKKIPSY 261
>UNIPROTKB|F1S8P2 [details] [associations]
symbol:EXO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051908 "double-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=IEA] [GO:0048256 "flap
endonuclease activity" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] [GO:0045145 "single-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=IEA] [GO:0043566
"structure-specific DNA binding" evidence=IEA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0002455 "humoral immune response mediated by circulating
immunoglobulin" evidence=IEA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR008918 InterPro:IPR019974
InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853
PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279 SMART:SM00484
SMART:SM00485 GO:GO:0005634 GO:GO:0002455 GO:GO:0006298
GO:GO:0090305 GO:GO:0045190 GeneTree:ENSGT00510000047676
PANTHER:PTHR11081 SUPFAM:SSF47807 GO:GO:0016446 KO:K10746 CTD:9156
GO:GO:0048256 GO:GO:0045145 GO:GO:0051908 OMA:EPIHVRK GO:GO:0043566
EMBL:FP236465 EMBL:FP236767 RefSeq:XP_003130603.3
Ensembl:ENSSSCT00000011887 GeneID:100512301 KEGG:ssc:100512301
Uniprot:F1S8P2
Length = 836
Score = 211 (79.3 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 55/151 (36%), Positives = 78/151 (51%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEVDQARLGKCKQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKVFPLTAILDMKVPAKW 317
MCILSGCDY + ++G+GL KA + +PD VK K +++ VP +
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLRLANNPDI------VKVIKKIGHYLKMNITVPEDY 271
Query: 318 YRRIIGSIEVICGFSMATIPFNMK-VPAKWY 347
I + + + P N K +P Y
Sbjct: 272 IEGFIRANNTFL-YQLVFDPINRKLIPLNAY 301
Score = 158 (60.7 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 36/104 (34%), Positives = 61/104 (58%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + +
Sbjct: 172 SDLLAFGCKKVILKMDQFGNGLEVDQARLGKCKQLGDV-FTEEKFRYMCILSGCDYLSSL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+G+GL KA + +PD ++KI Y K+ + + ++++
Sbjct: 231 RGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYI 272
Score = 142 (55.0 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
>UNIPROTKB|Q9UQ84 [details] [associations]
symbol:EXO1 "Exonuclease 1" species:9606 "Homo sapiens"
[GO:0007126 "meiosis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0002455 "humoral immune response mediated by
circulating immunoglobulin" evidence=IEA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IEA] [GO:0043566
"structure-specific DNA binding" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] [GO:0051908 "double-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=IDA] [GO:0035312
"5'-3' exodeoxyribonuclease activity" evidence=IDA] [GO:0045145
"single-stranded DNA specific 5'-3' exodeoxyribonuclease activity"
evidence=IDA] [GO:0048256 "flap endonuclease activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006298 "mismatch repair" evidence=ISS;IDA;IMP;IPI] [GO:0008409
"5'-3' exonuclease activity" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0004527 "exonuclease
activity" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0004523 "ribonuclease H activity" evidence=TAS]
InterPro:IPR006084 InterPro:IPR006085 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR019974 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 PROSITE:PS00841
PROSITE:PS00842 SMART:SM00279 SMART:SM00484 SMART:SM00485
EMBL:AF042282 GO:GO:0005634 GO:GO:0007126 GO:GO:0002455
GO:GO:0046872 GO:GO:0003677 GO:GO:0006298 GO:GO:0006310
GO:GO:0045190 GO:GO:0004523 eggNOG:COG0258 PANTHER:PTHR11081
SUPFAM:SSF47807 GO:GO:0016446 BRENDA:3.1.11.1 KO:K10746 CTD:9156
HOVERGEN:HBG081488 OrthoDB:EOG4M91QT GO:GO:0048256 GO:GO:0045145
GO:GO:0051908 EMBL:AF084974 EMBL:AF091740 EMBL:AF091754
EMBL:AF091742 EMBL:AF091743 EMBL:AF091744 EMBL:AF091745
EMBL:AF091746 EMBL:AF091747 EMBL:AF091748 EMBL:AF091749
EMBL:AF091750 EMBL:AF091751 EMBL:AF091752 EMBL:AF091753
EMBL:AC004783 EMBL:AF060479 EMBL:AF549168 EMBL:AL365366
EMBL:BC007491 EMBL:AL080139 IPI:IPI00219173 IPI:IPI00556476
PIR:T12524 RefSeq:NP_003677.4 RefSeq:NP_006018.4 RefSeq:NP_569082.2
UniGene:Hs.498248 PDB:3QE9 PDB:3QEA PDB:3QEB PDBsum:3QE9
PDBsum:3QEA PDBsum:3QEB ProteinModelPortal:Q9UQ84 SMR:Q9UQ84
IntAct:Q9UQ84 STRING:Q9UQ84 PhosphoSite:Q9UQ84 DMDM:85700954
PaxDb:Q9UQ84 PRIDE:Q9UQ84 DNASU:9156 Ensembl:ENST00000348581
Ensembl:ENST00000366548 Ensembl:ENST00000518483 GeneID:9156
KEGG:hsa:9156 UCSC:uc001hzh.3 UCSC:uc021plk.1 GeneCards:GC01P242011
H-InvDB:HIX0022634 HGNC:HGNC:3511 MIM:606063 neXtProt:NX_Q9UQ84
PharmGKB:PA27923 InParanoid:Q9UQ84 OMA:EPIHVRK PhylomeDB:Q9UQ84
EvolutionaryTrace:Q9UQ84 GenomeRNAi:9156 NextBio:34349
ArrayExpress:Q9UQ84 Bgee:Q9UQ84 CleanEx:HS_EXO1
Genevestigator:Q9UQ84 GermOnline:ENSG00000174371 GO:GO:0043566
Uniprot:Q9UQ84
Length = 846
Score = 208 (78.3 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 44/92 (47%), Positives = 59/92 (64%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLRLANNPD 249
Score = 157 (60.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 36/104 (34%), Positives = 61/104 (58%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + +
Sbjct: 172 SDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+G+GL KA + +PD ++KI Y K+ + + ++++
Sbjct: 231 RGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYI 272
Score = 141 (54.7 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQA-NLLKGKQLLREG 110
>UNIPROTKB|E2QWL7 [details] [associations]
symbol:EXO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051908 "double-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=IEA] [GO:0048256 "flap
endonuclease activity" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] [GO:0045145 "single-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=IEA] [GO:0043566
"structure-specific DNA binding" evidence=IEA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0002455 "humoral immune response mediated by circulating
immunoglobulin" evidence=IEA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR008918 InterPro:IPR019974
InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853
PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279 SMART:SM00484
SMART:SM00485 GO:GO:0005634 GO:GO:0002455 GO:GO:0006298
GO:GO:0090305 GO:GO:0045190 GeneTree:ENSGT00510000047676
PANTHER:PTHR11081 SUPFAM:SSF47807 GO:GO:0016446 KO:K10746
GO:GO:0048256 GO:GO:0045145 GO:GO:0051908 OMA:EPIHVRK GO:GO:0043566
EMBL:AAEX03005244 RefSeq:XP_003639234.1 ProteinModelPortal:E2QWL7
Ensembl:ENSCAFT00000024978 GeneID:100855525 KEGG:cfa:100855525
NextBio:20863405 Uniprot:E2QWL7
Length = 836
Score = 208 (78.3 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 44/92 (47%), Positives = 59/92 (64%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKVLRLANNPD 249
Score = 157 (60.3 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 36/104 (34%), Positives = 61/104 (58%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + +
Sbjct: 172 SDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLSSL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+G+GL KA + +PD ++KI Y K+ + + ++++
Sbjct: 231 RGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYI 272
Score = 140 (54.3 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK +++FDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPVLIFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
Score = 37 (18.1 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 235 DREKLPSALKM-PLAKFTD 252
D EKLPS K PL+ D
Sbjct: 791 DSEKLPSCKKPDPLSPVKD 809
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 94 DREKLPSALKM-PLAKFTD 111
D EKLPS K PL+ D
Sbjct: 791 DSEKLPSCKKPDPLSPVKD 809
>UNIPROTKB|E1BF15 [details] [associations]
symbol:EXO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051908 "double-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=IEA] [GO:0048256 "flap
endonuclease activity" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] [GO:0045145 "single-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=IEA] [GO:0043566
"structure-specific DNA binding" evidence=IEA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0002455 "humoral immune response mediated by circulating
immunoglobulin" evidence=IEA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR008918 InterPro:IPR019974
InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853
PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279 SMART:SM00484
SMART:SM00485 GO:GO:0005634 GO:GO:0002455 GO:GO:0006298
GO:GO:0090305 GO:GO:0045190 GeneTree:ENSGT00510000047676
PANTHER:PTHR11081 SUPFAM:SSF47807 GO:GO:0016446 KO:K10746 CTD:9156
GO:GO:0048256 GO:GO:0045145 GO:GO:0051908 OMA:EPIHVRK GO:GO:0043566
EMBL:DAAA02042804 IPI:IPI00698763 RefSeq:XP_002694001.1
UniGene:Bt.62135 Ensembl:ENSBTAT00000012365 GeneID:506390
KEGG:bta:506390 NextBio:20867588 Uniprot:E1BF15
Length = 835
Score = 209 (78.6 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 45/92 (48%), Positives = 59/92 (64%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARLGMCKQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSLRGIGLAKACKLLRLANNPD 249
Score = 158 (60.7 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 37/104 (35%), Positives = 61/104 (58%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY + +
Sbjct: 172 SDLLAFGCKKVILKMDQFGNGLEVDQARLGMCKQLGDV-FTEEKFRYMCILSGCDYLSSL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
+G+GL KA + +PD +RKI Y K+ + + ++++
Sbjct: 231 RGIGLAKACKLLRLANNPDILKVVRKIGHYLKMN--ITVPEDYI 272
Score = 138 (53.6 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK +NMLL+H IK I+VFDG LP+K+ E+ RR+R + + K +LL G
Sbjct: 55 YVGFCMKLVNMLLSHGIKPILVFDGCTLPSKKEVEKSRRERRQA-NLLKGKQLLREG 110
Score = 37 (18.1 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 235 DREKLPSALKM-PLAKFTD 252
D EKLPS K PL+ D
Sbjct: 791 DSEKLPSCKKPDPLSPVKD 809
Score = 37 (18.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 94 DREKLPSALKM-PLAKFTD 111
D EKLPS K PL+ D
Sbjct: 791 DSEKLPSCKKPDPLSPVKD 809
>RGD|1309465 [details] [associations]
symbol:Exo1 "exonuclease 1" species:10116 "Rattus norvegicus"
[GO:0002455 "humoral immune response mediated by circulating
immunoglobulin" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=ISO] [GO:0035312 "5'-3' exodeoxyribonuclease
activity" evidence=ISO] [GO:0043566 "structure-specific DNA
binding" evidence=ISO] [GO:0045145 "single-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=ISO] [GO:0045190
"isotype switching" evidence=ISO] [GO:0048256 "flap endonuclease
activity" evidence=ISO] [GO:0051908 "double-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=ISO]
InterPro:IPR006084 InterPro:IPR006085 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR019974 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 PROSITE:PS00841
PROSITE:PS00842 SMART:SM00279 SMART:SM00484 SMART:SM00485
RGD:1309465 GO:GO:0005634 GO:GO:0002455 GO:GO:0006298 GO:GO:0090305
GO:GO:0045190 GeneTree:ENSGT00510000047676 PANTHER:PTHR11081
SUPFAM:SSF47807 GO:GO:0016446 OrthoDB:EOG4M91QT GO:GO:0048256
GO:GO:0045145 GO:GO:0051908 GO:GO:0043566 IPI:IPI00768759
Ensembl:ENSRNOT00000005314 UCSC:RGD:1309465 Uniprot:D3ZEB0
Length = 836
Score = 208 (78.3 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARLGMCKQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLASLRGIGLAKACKVLRLANNPD 249
Score = 161 (61.7 bits), Expect = 3.2e-17, Sum P(3) = 3.2e-17
Identities = 37/105 (35%), Positives = 61/105 (58%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY +
Sbjct: 172 SDLLAFGCKKVILKMDQFGNGLEVDQARLGMCKQLGDV-FTEEKFRYMCILSGCDYLASL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+G+GL KA + +PD ++KI Y K+ + + ++++T
Sbjct: 231 RGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMN--ITVPEDYIT 273
Score = 134 (52.2 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL++ +K I+VFDG LP+K+ E RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSYGVKPILVFDGCTLPSKKEVERSRRERRQ-SNLLKGKQLLREG 110
Score = 40 (19.1 bits), Expect = 3.2e-17, Sum P(3) = 3.2e-17
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 235 DREKLPSALKMPLAKFTD 252
D EKLPS K PL+ D
Sbjct: 793 DSEKLPSC-KKPLSPVKD 809
Score = 40 (19.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 94 DREKLPSALKMPLAKFTD 111
D EKLPS K PL+ D
Sbjct: 793 DSEKLPSC-KKPLSPVKD 809
>MGI|MGI:1349427 [details] [associations]
symbol:Exo1 "exonuclease 1" species:10090 "Mus musculus"
[GO:0002455 "humoral immune response mediated by circulating
immunoglobulin" evidence=IMP] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=ISA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006298
"mismatch repair" evidence=ISO] [GO:0006310 "DNA recombination"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0008409
"5'-3' exonuclease activity" evidence=ISA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0035312 "5'-3'
exodeoxyribonuclease activity" evidence=ISO] [GO:0043566
"structure-specific DNA binding" evidence=IDA] [GO:0045145
"single-stranded DNA specific 5'-3' exodeoxyribonuclease activity"
evidence=ISO] [GO:0045190 "isotype switching" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048256 "flap
endonuclease activity" evidence=ISO] [GO:0051908 "double-stranded
DNA specific 5'-3' exodeoxyribonuclease activity" evidence=ISO]
InterPro:IPR006084 InterPro:IPR006085 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR019974 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 PROSITE:PS00841
PROSITE:PS00842 SMART:SM00279 SMART:SM00484 SMART:SM00485
MGI:MGI:1349427 GO:GO:0005634 GO:GO:0007126 GO:GO:0002455
GO:GO:0046872 GO:GO:0006298 GO:GO:0045190 eggNOG:COG0258
GeneTree:ENSGT00510000047676 PANTHER:PTHR11081 SUPFAM:SSF47807
GO:GO:0016446 KO:K10746 CTD:9156 HOGENOM:HOG000112413
HOVERGEN:HBG081488 OrthoDB:EOG4M91QT GO:GO:0048256 GO:GO:0045145
GO:GO:0051908 OMA:EPIHVRK GO:GO:0043566 EMBL:AJ238213 EMBL:AK028728
EMBL:AK166425 EMBL:BC006671 IPI:IPI00331190 RefSeq:NP_036142.2
UniGene:Mm.283046 ProteinModelPortal:Q9QZ11 SMR:Q9QZ11
STRING:Q9QZ11 PhosphoSite:Q9QZ11 PRIDE:Q9QZ11
Ensembl:ENSMUST00000039725 GeneID:26909 KEGG:mmu:26909
UCSC:uc007dtu.2 InParanoid:Q9QZ11 NextBio:304777 Bgee:Q9QZ11
CleanEx:MM_EXO1 Genevestigator:Q9QZ11 GermOnline:ENSMUSG00000039748
Uniprot:Q9QZ11
Length = 837
Score = 208 (78.3 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N AG VITEDSDLL FG KK+I K+D GN +D+ +L ++ FT+ KFRY
Sbjct: 159 NKAGIVQAVITEDSDLLAFGCKKVILKMDQFGNGLEVDQARLGMCKQLGDV-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY ++G+GL KA + +PD
Sbjct: 218 MCILSGCDYLASLRGIGLAKACKVLRLANNPD 249
Score = 158 (60.7 bits), Expect = 8.8e-17, Sum P(3) = 8.8e-17
Identities = 36/105 (34%), Positives = 61/105 (58%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +D+ +L ++ FT+ KFRYMCILSGCDY +
Sbjct: 172 SDLLAFGCKKVILKMDQFGNGLEVDQARLGMCKQLGDV-FTEEKFRYMCILSGCDYLASL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLT 174
+G+GL KA + +PD ++KI Y ++ + + ++++T
Sbjct: 231 RGIGLAKACKVLRLANNPDIVKVIKKIGHYLRMN--ITVPEDYIT 273
Score = 133 (51.9 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL++ +K I++FDG LP+K+ E RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSYGVKPILIFDGCTLPSKKEVERSRRERRQ-SNLLKGKQLLREG 110
Score = 40 (19.1 bits), Expect = 8.8e-17, Sum P(3) = 8.8e-17
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 235 DREKLPSALKMPLAKFTD 252
D EKLPS K PL+ D
Sbjct: 794 DSEKLPSC-KKPLSPVKD 810
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 94 DREKLPSALKMPLAKFTD 111
D EKLPS K PL+ D
Sbjct: 794 DSEKLPSC-KKPLSPVKD 810
>ZFIN|ZDB-GENE-040426-2828 [details] [associations]
symbol:exo1 "exonuclease 1" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0045145 "single-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0048256 "flap endonuclease
activity" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019734 InterPro:IPR019974 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 PROSITE:PS00841
PROSITE:PS00842 SMART:SM00279 SMART:SM00484 SMART:SM00485
ZFIN:ZDB-GENE-040426-2828 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006298 GO:GO:0006310 eggNOG:COG0258 PANTHER:PTHR11081
SUPFAM:SSF47807 KO:K10746 EMBL:BC044187 IPI:IPI00614375
RefSeq:NP_998634.1 UniGene:Dr.17858 ProteinModelPortal:Q803U7
STRING:Q803U7 PRIDE:Q803U7 GeneID:406778 KEGG:dre:406778 CTD:9156
HOGENOM:HOG000112413 HOVERGEN:HBG081488 InParanoid:Q803U7
OrthoDB:EOG4M91QT NextBio:20818292 ArrayExpress:Q803U7
GO:GO:0048256 GO:GO:0045145 Uniprot:Q803U7
Length = 806
Score = 189 (71.6 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 46/106 (43%), Positives = 62/106 (58%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N + A VITEDSDLL FG KK+I K+D GN +++ L + FT+ KFRY
Sbjct: 159 NKSDIAQAVITEDSDLLAFGCKKVILKMDKQGNGLEIEQCHLGRCKSLGNI-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPDF-ENRKEYVKYAKV 302
MCILSGCDY + G+GL KA + +PD + K+ +Y K+
Sbjct: 218 MCILSGCDYLQSLYGIGLGKACKLLRMANNPDILKVIKKMGQYLKM 263
Score = 151 (58.2 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 28/57 (49%), Positives = 43/57 (75%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV+YCMK+++MLL+ +K I+VFDGR+LP+K+ E+ RR+R + + QK +LL G
Sbjct: 55 YVSYCMKFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQA-NLQKGKQLLREG 110
Score = 142 (55.0 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G +I K+D GN +++ L + FT+ KFRYMCILSGCDY +
Sbjct: 172 SDLLAFGCKKVILKMDKQGNGLEIEQCHLGRCKSLGNI-FTEEKFRYMCILSGCDYLQSL 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFL 173
G+GL KA + +PD ++K+ Y K+ + + +E++
Sbjct: 231 YGIGLGKACKLLRMANNPDILKVIKKMGQYLKMD--ISVPEEYI 272
>UNIPROTKB|Q9W6K2 [details] [associations]
symbol:exo1 "Exonuclease 1" species:8355 "Xenopus laevis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0006298 "mismatch repair"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0045145 "single-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=ISS] [GO:0048256 "flap
endonuclease activity" evidence=ISS] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019974 InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279
SMART:SM00484 SMART:SM00485 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006298 GO:GO:0006310 PANTHER:PTHR11081
SUPFAM:SSF47807 KO:K10746 CTD:9156 HOVERGEN:HBG081488 GO:GO:0048256
GO:GO:0045145 EMBL:AF134570 EMBL:BC084102 RefSeq:NP_001083827.1
UniGene:Xl.489 ProteinModelPortal:Q9W6K2 GeneID:399140
KEGG:xla:399140 Xenbase:XB-GENE-982081 Uniprot:Q9W6K2
Length = 734
Score = 195 (73.7 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 41/88 (46%), Positives = 55/88 (62%)
Query: 202 YADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCIL 261
+A+ +ITEDSDLL FG KK++ K+D GN +D+ + + FT+ KFRYMCIL
Sbjct: 163 FAEAIITEDSDLLAFGCKKVLLKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCIL 221
Query: 262 SGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
SGCDY I G+GL KA + +PD
Sbjct: 222 SGCDYLPSIHGIGLAKACKLLKVANNPD 249
Score = 146 (56.5 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G ++ K+D GN +D+ + + FT+ KFRYMCILSGCDY I
Sbjct: 172 SDLLAFGCKKVLLKMDKFGNGLEIDQARFGMCRSLGDV-FTEEKFRYMCILSGCDYLPSI 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGK 161
G+GL KA + +PD ++KI Y K
Sbjct: 231 HGIGLAKACKLLKVANNPDITKVIQKIGQYLK 262
Score = 124 (48.7 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK ++MLL+ +K I+VFDG LP+K+ E+ RR++ + + QK +LL G
Sbjct: 55 YVQFCMKLVHMLLSFGVKPILVFDGCTLPSKKDVEKARREKRQT-NLQKGKQLLREG 110
>UNIPROTKB|E1C1G7 [details] [associations]
symbol:EXO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002455 "humoral immune response mediated by
circulating immunoglobulin" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IEA] [GO:0043566 "structure-specific DNA binding"
evidence=IEA] [GO:0045145 "single-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] [GO:0048256 "flap endonuclease activity"
evidence=IEA] [GO:0051908 "double-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=IEA] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019974 InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279
SMART:SM00484 SMART:SM00485 GO:GO:0005634 GO:GO:0002455
GO:GO:0006298 GO:GO:0006310 GO:GO:0090305
GeneTree:ENSGT00510000047676 PANTHER:PTHR11081 SUPFAM:SSF47807
GO:GO:0048256 GO:GO:0045145 GO:GO:0051908 OMA:EPIHVRK GO:GO:0043566
EMBL:AADN02011750 IPI:IPI00593066 Ensembl:ENSGALT00000017486
Uniprot:E1C1G7
Length = 798
Score = 201 (75.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 43/92 (46%), Positives = 57/92 (61%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRY 257
N G +ITEDSDLL FG KK+ K+D GN +D+ +L + ++ FT+ KFRY
Sbjct: 159 NKTGVVQAIITEDSDLLAFGCKKVFLKIDKFGNGLEIDQARLGNCKQLGNI-FTEEKFRY 217
Query: 258 MCILSGCDYWTGIKGMGLKKAKDYVFSIMDPD 289
MCILSGCDY + I G+GL KA + +PD
Sbjct: 218 MCILSGCDYLSSIHGIGLAKACKLLKLANNPD 249
Score = 157 (60.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 45/152 (29%), Positives = 78/152 (51%)
Query: 71 AELLHSGSSIIY-KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G ++ K+D GN +D+ +L + ++ FT+ KFRYMCILSGCDY + I
Sbjct: 172 SDLLAFGCKKVFLKIDKFGNGLEIDQARLGNCKQLGNI-FTEEKFRYMCILSGCDYLSSI 230
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTSGAPQPFGARNEG-- 187
G+GL KA + +PD ++K+ Y K+ + +++E++ Q F N
Sbjct: 231 HGIGLAKACKLLKLANNPDIIKVIKKMGHYLKMN--ITVSEEYI-----QGFTRANNTFL 283
Query: 188 RSLLSAVTERNIAGYADYVITEDSDLLVFGAK 219
L+ +R + DY D + L++ +
Sbjct: 284 YQLVFDPIKRKLVPLNDYADDIDPETLLYAGR 315
Score = 111 (44.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK ++MLL+ IK ++VFDG LP+K+ E+ RR++ + + K +L G
Sbjct: 55 YVVFCMKLVDMLLSFGIKPVLVFDGCTLPSKKEVEKARREKRQA-NLLKGKQLFREG 110
>UNIPROTKB|G4NE19 [details] [associations]
symbol:MGG_00841 "Exonuclease 1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR008918 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 SMART:SM00279
SMART:SM00484 SMART:SM00485 EMBL:CM001235 GO:GO:0003677
GO:GO:0006281 GO:GO:0004527 GO:GO:0090305 PANTHER:PTHR11081
SUPFAM:SSF47807 KO:K10746 RefSeq:XP_003718138.1
ProteinModelPortal:G4NE19 EnsemblFungi:MGG_00841T0 GeneID:2674671
KEGG:mgr:MGG_00841 Uniprot:G4NE19
Length = 780
Score = 207 (77.9 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 196 ERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKF 255
ERN GY +I+EDSDLLVFGAK+++ KLD G C ++R + + ++ L +TDA+F
Sbjct: 159 ERN--GYVSGIISEDSDLLVFGAKRLLTKLDQHGQCIEVNRREFCAVREISLTGWTDAEF 216
Query: 256 RYMCILSGCDYWTGIKGMGLKKA 278
R M I SGCDY GI MGLK A
Sbjct: 217 RQMAIFSGCDYLDGINKMGLKTA 239
Score = 142 (55.0 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 71 AELLHSGSS-IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G+ ++ KLD G C ++R + + ++ L +TDA+FR M I SGCDY GI
Sbjct: 172 SDLLVFGAKRLLTKLDQHGQCIEVNRREFCAVREISLTGWTDAEFRQMAIFSGCDYLDGI 231
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEFLTS 175
MGLK A + P E +R++ GK KI++ +L +
Sbjct: 232 NKMGLKTAYRMIRKHKTP--EKVIRQLQFEGKH----KISENYLAA 271
Score = 89 (36.4 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV++ M + M+ +VFDG LP+K TE R KR E K+ ELL +G
Sbjct: 55 YVDFAMHRVRMVKYFGATPYIVFDGDFLPSKALTEASRAKRRE-ESKKAGMELLKAG 110
>DICTYBASE|DDB_G0291570 [details] [associations]
symbol:exo1 "5'3'-exonuclease N- and
I-domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR006084 InterPro:IPR006085 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR019734 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 SMART:SM00279
SMART:SM00484 SMART:SM00485 dictyBase:DDB_G0291570 GO:GO:0005634
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0004519
GO:GO:0008409 eggNOG:COG0258 PANTHER:PTHR11081 SUPFAM:SSF47807
KO:K10746 RefSeq:XP_635308.1 ProteinModelPortal:Q54ED2
EnsemblProtists:DDB0232997 GeneID:8628252 KEGG:ddi:DDB_G0291570
OMA:KSQANIC Uniprot:Q54ED2
Length = 1046
Score = 174 (66.3 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 45/112 (40%), Positives = 58/112 (51%)
Query: 194 VTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALK--MPLAKFT 251
+T +I G D +ITEDSDL+ FGA II+K+D G + E L S K F
Sbjct: 155 LTYLSITGQVDAIITEDSDLVAFGATHIIFKMDKYGYAQEIKTEDLGSCKKDGYDFIDFN 214
Query: 252 DAKFRYMCILSGCDYWTGIKGMGLKKAKDYVFSIMDP--DFENRKEYVKYAK 301
R MCILSGCDY + GMGLK + F ++ D E +Y+K K
Sbjct: 215 QTMLRQMCILSGCDYLPSLSGMGLKTS----FKLLKQHRDIEKVFKYLKREK 262
Score = 121 (47.7 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 36/112 (32%), Positives = 65/112 (58%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKRAEIRHKQKA--AELLHSG 77
Y+NY + I ML+++K+ +++FDG LP K+ E++R R R E ++K KA E S
Sbjct: 55 YINYFISRIKMLISYKVIPVVIFDGGPLPNKKLKEQERLRHREEYKNKAKAYLLEGNKSQ 114
Query: 78 SSIIYK--LDLSGNCCFMDREKLPSALKMP--LAKF-TDAKFRYMCILSGCD 124
++I ++ +D++ F+ ++L ALK+ +A + DA+ Y+ I D
Sbjct: 115 ANICFQKAVDITPRMAFLLIKEL-RALKVEYLVAPYEADAQLTYLSITGQVD 165
>WB|WBGene00009731 [details] [associations]
symbol:exo-1 species:6239 "Caenorhabditis elegans"
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853
SMART:SM00279 SMART:SM00484 SMART:SM00485 GO:GO:0003677
GO:GO:0006281 GO:GO:0090305 GO:GO:0004518 EMBL:Z93382
eggNOG:COG0258 GeneTree:ENSGT00510000047676 PANTHER:PTHR11081
SUPFAM:SSF47807 KO:K10746 PIR:T22235 RefSeq:NP_499770.1
ProteinModelPortal:O62245 SMR:O62245 IntAct:O62245 MINT:MINT-117279
STRING:O62245 PaxDb:O62245 EnsemblMetazoa:F45G2.3 GeneID:176765
KEGG:cel:CELE_F45G2.3 UCSC:F45G2.3 CTD:176765 WormBase:F45G2.3
HOGENOM:HOG000022038 InParanoid:O62245 OMA:IHMGEET NextBio:893914
Uniprot:O62245
Length = 639
Score = 155 (59.6 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 44/107 (41%), Positives = 58/107 (54%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLD-LSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCI 260
D VITEDSDL+VFG + I +K +G C ++ L + L KF KFR +CI
Sbjct: 166 DAVITEDSDLIVFGCEMIYFKWQSATGECSVYEKCNLKNCFTGELGGDKFDFVKFRRICI 225
Query: 261 LSGCDYW-TGIKGMGLKKAKDY--VFSIMDPDFENRK--EYVKYAKV 302
LSGCDY G+ G+GL A + + SI D RK Y+K K+
Sbjct: 226 LSGCDYLQAGLPGVGLSTAAKFFSMTSIKDLRTLLRKVPSYLKNPKL 272
Score = 131 (51.2 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 30/55 (54%), Positives = 37/55 (67%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKA-AELL 74
YVNY KY+ LL V+MVFDGR LPAK+ T E+RR E+R K+K AE+L
Sbjct: 55 YVNYVNKYVKELLGMGCHVVMVFDGRPLPAKKGTNEERR---ELREKRKEHAEML 106
Score = 115 (45.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 71 AELLHSGSSIIY-KLD-LSGNCCFMDREKLPSALKMPLA--KFTDAKFRYMCILSGCDYW 126
++L+ G +IY K +G C ++ L + L KF KFR +CILSGCDY
Sbjct: 173 SDLIVFGCEMIYFKWQSATGECSVYEKCNLKNCFTGELGGDKFDFVKFRRICILSGCDYL 232
Query: 127 -TGIKGMGLKKAKDYVFSIMD-PDFENALRKINVYGK 161
G+ G+GL A + FS+ D LRK+ Y K
Sbjct: 233 QAGLPGVGLSTAAKF-FSMTSIKDLRTLLRKVPSYLK 268
>TAIR|locus:2013633 [details] [associations]
symbol:AT1G29630 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA;ISS] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0031048 "chromatin silencing by small
RNA" evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR008918 InterPro:IPR019974
InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853
PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279 SMART:SM00484
SMART:SM00485 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0004527
GO:GO:0090305 GO:GO:0004519 EMBL:AC068667 eggNOG:COG0258
PANTHER:PTHR11081 SUPFAM:SSF47807 EMBL:AY140055 IPI:IPI00532766
IPI:IPI00852240 PIR:E86419 RefSeq:NP_001077624.1 RefSeq:NP_174256.2
UniGene:At.40698 HSSP:P39748 ProteinModelPortal:Q8L6Z7 SMR:Q8L6Z7
PRIDE:Q8L6Z7 EnsemblPlants:AT1G29630.2 GeneID:839840
KEGG:ath:AT1G29630 TAIR:At1g29630 HOGENOM:HOG000064704
InParanoid:Q8L6Z7 KO:K10746 OMA:LEHEANG PhylomeDB:Q8L6Z7
ProtClustDB:CLSN2699050 Genevestigator:Q8L6Z7 Uniprot:Q8L6Z7
Length = 735
Score = 177 (67.4 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 39/104 (37%), Positives = 57/104 (54%)
Query: 199 IAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYM 258
I D +ITEDSDL+ FG +II+K+D G+ KLP + L+ F+ M
Sbjct: 160 ITKQVDAIITEDSDLIPFGCLRIIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEM 219
Query: 259 CILSGCDYWTGIKGMGLKKAKDYVFSIMDPDFENRKEYVKYAKV 302
CILSGCDY + GMGLK+A + ++ +++KY+ V
Sbjct: 220 CILSGCDYLQSLPGMGLKRAHALITKFKS--YDRVIKHLKYSTV 261
Score = 119 (46.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 80 IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKA 137
II+K+D G+ KLP + L+ F+ MCILSGCDY + GMGLK+A
Sbjct: 182 IIFKMDKFGHGVEFQASKLPKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRA 239
Score = 106 (42.4 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGSS 79
++ YCM +N+L H +K IMVFDG LP K +E++R R+ + +A E +G+S
Sbjct: 55 HIQYCMHRVNLLRHHGVKPIMVFDGGPLPMK-LEQENKRARSRKENLARALEHEANGNS 112
>ASPGD|ASPL0000033989 [details] [associations]
symbol:AN3035 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019974 InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00841 SMART:SM00279 SMART:SM00484
SMART:SM00485 GO:GO:0005634 GO:GO:0003677 GO:GO:0006281
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0004527 GO:GO:0090305
GO:GO:0004519 eggNOG:COG0258 OrthoDB:EOG44QX8J PANTHER:PTHR11081
SUPFAM:SSF47807 KO:K10746 RefSeq:XP_660639.1
ProteinModelPortal:Q5B8U5 STRING:Q5B8U5
EnsemblFungi:CADANIAT00010044 GeneID:2874467 KEGG:ani:AN3035.2
HOGENOM:HOG000196065 OMA:KTAYRSI Uniprot:Q5B8U5
Length = 761
Score = 185 (70.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCI 260
G+ D +I+EDSDLLVFGAK+++ KLD G ++R + ++ +TDA FR MCI
Sbjct: 162 GFIDGIISEDSDLLVFGAKRLLSKLDQHGELIEINRADFTACREVSFVGWTDADFRRMCI 221
Query: 261 LSGCDYWTGIKGMGLKKA 278
+SGCDY I +GLK A
Sbjct: 222 MSGCDYLPNIARVGLKTA 239
Score = 116 (45.9 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 71 AELLHSGSS-IIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGI 129
++LL G+ ++ KLD G ++R + ++ +TDA FR MCI+SGCDY I
Sbjct: 172 SDLLVFGAKRLLSKLDQHGELIEINRADFTACREVSFVGWTDADFRRMCIMSGCDYLPNI 231
Query: 130 KGMGLKKAKDYVFSIMDPDFENALRKINVYG 160
+GLK A + E ALR + G
Sbjct: 232 ARVGLKTAYRSIRKYKS--VEKALRMLQFEG 260
Score = 97 (39.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAA--ELLHSG 77
++++ + + MLL +K +VFDG +LP+K TE DR++R RH+ K EL G
Sbjct: 55 HIDFVLSRVRMLLFFGVKPYLVFDGDNLPSKSGTELDRQQR---RHESKTLGMELYRKG 110
>POMBASE|SPBC29A10.05 [details] [associations]
symbol:exo1 "exonuclease I Exo1" species:4896
"Schizosaccharomyces pombe" [GO:0000706 "meiotic DNA double-strand
break processing" evidence=TAS] [GO:0000723 "telomere maintenance"
evidence=TAS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0006298 "mismatch repair"
evidence=IGI;IMP] [GO:0006312 "mitotic recombination" evidence=TAS]
[GO:0008409 "5'-3' exonuclease activity" evidence=IMP] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0043570
"maintenance of DNA repeat elements" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019974 InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279
SMART:SM00484 SMART:SM00485 PomBase:SPBC29A10.05 GO:GO:0005634
GO:GO:0005819 GO:GO:0046872 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0006298 GO:GO:0003690 GO:GO:0006312 GO:GO:0000723
GO:GO:0000706 GO:GO:0043570 GO:GO:0017108 GO:GO:0008409
eggNOG:COG0258 OrthoDB:EOG44QX8J PANTHER:PTHR11081 SUPFAM:SSF47807
KO:K10746 EMBL:L35174 PIR:T43288 RefSeq:NP_596050.1
ProteinModelPortal:P53695 STRING:P53695 EnsemblFungi:SPBC29A10.05.1
GeneID:2540348 KEGG:spo:SPBC29A10.05 NextBio:20801476
Uniprot:P53695
Length = 571
Score = 187 (70.9 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 38/85 (44%), Positives = 54/85 (63%)
Query: 204 DYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSG 263
D +ITEDSD+LVFGA+ +++K+D GNC + R + +A + L + K R+M I SG
Sbjct: 165 DGIITEDSDMLVFGAQTVLFKMDGFGNCITIRRNDIANAQDLNL-RLPIEKLRHMAIFSG 223
Query: 264 CDYWTGIKGMGLKKAKDYVFSIMDP 288
CDY G+ GMGLK A Y+ +P
Sbjct: 224 CDYTDGVAGMGLKTALRYLQKYPEP 248
Score = 138 (53.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 73 LLHSGSSIIYKLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGM 132
L+ ++++K+D GNC + R + +A + L + K R+M I SGCDY G+ GM
Sbjct: 175 LVFGAQTVLFKMDGFGNCITIRRNDIANAQDLNL-RLPIEKLRHMAIFSGCDYTDGVAGM 233
Query: 133 GLKKAKDYVFSIMDPDFENALRKINVYGKIGSYVKITKEF 172
GLK A Y+ +P A+R + + + V KEF
Sbjct: 234 GLKTALRYLQKYPEP--RAAIRAMRLDKSLKVPVSFEKEF 271
Score = 84 (34.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAEL 73
Y+ Y + ML + +K ++VFDG LP K +TE+ R++R +Q+A EL
Sbjct: 55 YLKYAIHQALMLQYYGVKPLIVFDGGPLPCKASTEQKRKER-----RQEAFEL 102
>CGD|CAL0003631 [details] [associations]
symbol:EXO1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0031292 "gene conversion at
mating-type locus, DNA double-strand break processing"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR008918 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 SMART:SM00279
SMART:SM00484 SMART:SM00485 CGD:CAL0003631 GO:GO:0003677
GO:GO:0006281 GO:GO:0090305 GO:GO:0004518 EMBL:AACQ01000063
EMBL:AACQ01000062 eggNOG:COG0258 PANTHER:PTHR11081 SUPFAM:SSF47807
KO:K10746 RefSeq:XP_716765.1 RefSeq:XP_716825.1
ProteinModelPortal:Q5A520 STRING:Q5A520 GeneID:3641527
GeneID:3641583 KEGG:cal:CaO19.8541 KEGG:cal:CaO19.926
Uniprot:Q5A520
Length = 699
Score = 173 (66.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSALKMP-LAKFTDAKFRYMC 259
G D +++EDSDLL+FG KK+I KL G C ++R+K ++P L ++ + R +
Sbjct: 162 GIVDGILSEDSDLLIFGCKKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVA 221
Query: 260 ILSGCDYWTGIKGMGLKKA 278
+LSGCDY G+ G+GLK A
Sbjct: 222 MLSGCDYTKGVPGIGLKTA 240
Score = 69 (29.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAEIRHKQKAAELLHSGS- 78
Y+ + I ML I VFDG LP K+ T +R+ KR E K+ A + + + +
Sbjct: 55 YITAILNKIQMLNHFGITPYFVFDGASLPTKQETNRERQLKRQEA--KELAEKYIAANNR 112
Query: 79 SIIYK 83
+ YK
Sbjct: 113 KLAYK 117
>SGD|S000005559 [details] [associations]
symbol:EXO1 "5'-3' exonuclease and flap-endonuclease"
species:4932 "Saccharomyces cerevisiae" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0031292 "gene conversion
at mating-type locus, DNA double-strand break processing"
evidence=IMP] [GO:0031860 "telomeric 3' overhang formation"
evidence=IGI] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IGI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IMP] [GO:0000729 "DNA double-strand break
processing" evidence=IGI;IMP] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0000723 "telomere maintenance" evidence=IGI] [GO:0017108
"5'-flap endonuclease activity" evidence=IDA] [GO:0008409 "5'-3'
exonuclease activity" evidence=IDA] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019974 InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00841 PROSITE:PS00842 SMART:SM00279
SMART:SM00484 SMART:SM00485 SGD:S000005559 GO:GO:0005634
EMBL:X87331 EMBL:BK006948 GO:GO:0046872 GO:GO:0003677 GO:GO:0006298
GO:GO:0000706 GO:GO:0017108 GO:GO:0031292 GO:GO:0008409
GO:GO:0031860 eggNOG:COG0258 GeneTree:ENSGT00510000047676
OrthoDB:EOG44QX8J PANTHER:PTHR11081 SUPFAM:SSF47807 BRENDA:3.1.11.1
KO:K10746 EMBL:U86134 EMBL:Z74941 EMBL:S69545 PIR:S62169
RefSeq:NP_014676.1 ProteinModelPortal:P39875 SMR:P39875
DIP:DIP-2421N IntAct:P39875 MINT:MINT-553509 STRING:P39875
EnsemblFungi:YOR033C GeneID:854198 KEGG:sce:YOR033C CYGD:YOR033c
HOGENOM:HOG000112416 NextBio:976029 Genevestigator:P39875
GermOnline:YOR033C Uniprot:P39875
Length = 702
Score = 147 (56.8 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 40/100 (40%), Positives = 55/100 (55%)
Query: 186 EGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE---KLPSA 242
E S + + ++NI +I+EDSDLLVFG +++I KL+ G C + R+ KLP
Sbjct: 150 EADSQMVYLEQKNIV---QGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK- 205
Query: 243 LKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV 282
K PL T+ + M LSGCDY GI +GL A V
Sbjct: 206 -KFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLV 244
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 71 AELLHSGSS-IIYKLDLSGNCCFMDRE---KLPSALKMPLAKFTDAKFRYMCILSGCDYW 126
++LL G +I KL+ G C + R+ KLP K PL T+ + M LSGCDY
Sbjct: 172 SDLLVFGCRRLITKLNDYGECLEICRDNFIKLPK--KFPLGSLTNEEIITMVCLSGCDYT 229
Query: 127 TGIKGMGLKKAKDYV 141
GI +GL A V
Sbjct: 230 NGIPKVGLITAMKLV 244
Score = 83 (34.3 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRR-KRAE 63
Y+ + +K ++L K++ +VFDG +P K++TE RR KR E
Sbjct: 55 YLQFFIKRFSLLKTFKVEPYLVFDGDAIPVKKSTESKRRDKRKE 98
>TAIR|locus:2194085 [details] [associations]
symbol:AT1G18090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA;ISS] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019974 InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00842 SMART:SM00279 SMART:SM00484
SMART:SM00485 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0006281 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0258 PANTHER:PTHR11081 SUPFAM:SSF47807 KO:K10746
UniGene:At.48205 UniGene:At.70260 EMBL:AY050420 EMBL:AY113038
IPI:IPI00541706 RefSeq:NP_564047.1 ProteinModelPortal:Q94A33
SMR:Q94A33 PaxDb:Q94A33 PRIDE:Q94A33 EnsemblPlants:AT1G18090.1
GeneID:838389 KEGG:ath:AT1G18090 TAIR:At1g18090
HOGENOM:HOG000131774 InParanoid:Q94A33 OMA:ETFETTE
ProtClustDB:CLSN2687850 Genevestigator:Q94A33 Uniprot:Q94A33
Length = 577
Score = 135 (52.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 206 VITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSG 263
VITEDSDLL +G K +I+K+D G + + + A+ K F F MC+L+G
Sbjct: 174 VITEDSDLLAYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAG 233
Query: 264 CDYWTGIKGMGLKKAKDYV 282
CD+ + G+G+ +A ++
Sbjct: 234 CDFLPSVPGVGISRAHAFI 252
Score = 89 (36.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 11 TNLKKLLQHLYVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDR-RKR 61
T+ KK L+ Y++Y M +N+L ++I ++V DG ++P K AT ++R RKR
Sbjct: 50 TDGKKKLR--YIDYFMHRVNLLQHYEIIPVVVLDGGNMPCKAATGDERHRKR 99
Score = 85 (35.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWT 127
++LL G ++I+K+D G + + + A+ K F F MC+L+GCD+
Sbjct: 179 SDLLAYGCKAVIFKMDRYGKGEELVLDNVFQAVDQKPSFQNFDQELFTAMCVLAGCDFLP 238
Query: 128 GIKGMGLKKAKDYV 141
+ G+G+ +A ++
Sbjct: 239 SVPGVGISRAHAFI 252
>SGD|S000002671 [details] [associations]
symbol:DIN7 "Mitochondrial nuclease functioning in DNA repair
and replication" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;ISS;IDA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA;ISS] [GO:0090305
"nucleic acid phosphodiester bond hydrolysis" evidence=IEA]
InterPro:IPR006084 InterPro:IPR006085 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR019974 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 PROSITE:PS00841
PROSITE:PS00842 SMART:SM00279 SMART:SM00484 SMART:SM00485
SGD:S000002671 GO:GO:0005739 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 EMBL:BK006938 GO:GO:0004519 EMBL:Z70202
EMBL:Z68290 GO:GO:0004518 RefSeq:NP_010553.3 GeneID:851860
KEGG:sce:YDR267C EMBL:X90707 PIR:S61118 RefSeq:NP_010549.3
ProteinModelPortal:Q12086 SMR:Q12086 DIP:DIP-5214N IntAct:Q12086
MINT:MINT-493226 STRING:Q12086 EnsemblFungi:YDR263C GeneID:851856
KEGG:sce:YDR263C CYGD:YDR263c eggNOG:COG0258
GeneTree:ENSGT00510000047676 OrthoDB:EOG44QX8J NextBio:969788
Genevestigator:Q12086 GermOnline:YDR263C PANTHER:PTHR11081
SUPFAM:SSF47807 Uniprot:Q12086
Length = 430
Score = 138 (53.6 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 40/109 (36%), Positives = 61/109 (55%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYM 258
G +I+EDSDLLVFG K +I KL+ G + ++ SAL PL + ++ +FR +
Sbjct: 162 GLIQGIISEDSDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNL 220
Query: 259 CILSGCDYWTGIKGMGLKKAKDYV--FSIM-DPDFE-NRKEYVKYAKVF 303
L+GCDY +GI +G+ A V +S M D + R E + ++K F
Sbjct: 221 VCLAGCDYTSGIWKVGVVTAMKIVKRYSEMKDILIQIERTEKLCFSKAF 269
Score = 83 (34.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 71 AELLHSG-SSIIYKLDLSGNCCFMDREKLPSAL--KMPLAKFTDAKFRYMCILSGCDYWT 127
++LL G ++I KL+ G + ++ SAL PL + ++ +FR + L+GCDY +
Sbjct: 172 SDLLVFGCKTLITKLNDQGKALEISKDDF-SALPENFPLGELSEQQFRNLVCLAGCDYTS 230
Query: 128 GIKGMGLKKAKDYV 141
GI +G+ A V
Sbjct: 231 GIWKVGVVTAMKIV 244
Score = 78 (32.5 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSGS 78
Y+ + +K + +L KIK +VFDG L K TE RRK+ + ++ A +L +G+
Sbjct: 55 YLQFFIKRLQLLKRLKIKPYIVFDGDSLFVKNHTETRRRKK-RLENEMIAKKLWSAGN 111
>UNIPROTKB|Q5T399 [details] [associations]
symbol:EXO1 "Exonuclease 1" species:9606 "Homo sapiens"
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0002455 "humoral immune response mediated
by circulating immunoglobulin" evidence=IEA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IEA] [GO:0043566
"structure-specific DNA binding" evidence=IEA] [GO:0045190 "isotype
switching" evidence=IEA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR019974 Pfam:PF00752 PRINTS:PR00853 PROSITE:PS00841
SMART:SM00485 GO:GO:0002455 GO:GO:0006281 GO:GO:0004527
GO:GO:0090305 GO:GO:0045190 PANTHER:PTHR11081 GO:GO:0016446
HOGENOM:HOG000112413 EMBL:AL365366 UniGene:Hs.498248 HGNC:HGNC:3511
GO:GO:0043566 IPI:IPI01012173 SMR:Q5T399 STRING:Q5T399
Ensembl:ENST00000450748 Uniprot:Q5T399
Length = 135
Score = 141 (54.7 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELLHSG 77
YV +CMK++NMLL+H IK I+VFDG LP+K+ E RR+R + + K +LL G
Sbjct: 55 YVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQA-NLLKGKQLLREG 110
>GENEDB_PFALCIPARUM|PF07_0105 [details] [associations]
symbol:PF07_0105 "exonuclease i, putative"
species:5833 "Plasmodium falciparum" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006298 "mismatch repair" evidence=ISS] InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR020045
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 SMART:SM00484
SMART:SM00485 GO:GO:0005634 GO:GO:0003677 GO:GO:0006281
GO:GO:0004527 GO:GO:0090305 EMBL:AL844506 PANTHER:PTHR11081
SUPFAM:SSF47807 KO:K10746 RefSeq:XP_001349153.1
ProteinModelPortal:Q8IBK1 IntAct:Q8IBK1 MINT:MINT-1547666
EnsemblProtists:PF07_0105:mRNA GeneID:2655158 KEGG:pfa:PF07_0105
EuPathDB:PlasmoDB:PF3D7_0725000 Uniprot:Q8IBK1
Length = 1347
Score = 89 (36.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELL 74
Y+N+ K + + H IKV+ VFDG LP K+ R+ R E + K + E++
Sbjct: 55 YLNFIEKMLVPIYNHNIKVVFVFDGEELPEKKKENMIRKNRRE-KAKMELQEII 107
Score = 87 (35.7 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC 231
G+ I+EDSDLLV+G +++YKL +G C
Sbjct: 166 GFISCAISEDSDLLVYGCPRVLYKLKNTGEC 196
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 247 LAKFTDAKFRYMCILSGCDYWTG--IKGMGLKKAKDYVF 283
L F F MC+LSGCDY I GMG+K A + +F
Sbjct: 330 LQYFNIDMFLTMCVLSGCDYSNDFHITGMGIKTAYNLIF 368
>UNIPROTKB|Q8IBK1 [details] [associations]
symbol:PF07_0105 "Exonuclease I, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR006084 InterPro:IPR006085 InterPro:IPR006086
InterPro:IPR020045 Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853
SMART:SM00484 SMART:SM00485 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0004527 GO:GO:0090305 EMBL:AL844506
PANTHER:PTHR11081 SUPFAM:SSF47807 KO:K10746 RefSeq:XP_001349153.1
ProteinModelPortal:Q8IBK1 IntAct:Q8IBK1 MINT:MINT-1547666
EnsemblProtists:PF07_0105:mRNA GeneID:2655158 KEGG:pfa:PF07_0105
EuPathDB:PlasmoDB:PF3D7_0725000 Uniprot:Q8IBK1
Length = 1347
Score = 89 (36.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 21 YVNYCMKYINMLLAHKIKVIMVFDGRHLPAKEATEEDRRKRAEIRHKQKAAELL 74
Y+N+ K + + H IKV+ VFDG LP K+ R+ R E + K + E++
Sbjct: 55 YLNFIEKMLVPIYNHNIKVVFVFDGEELPEKKKENMIRKNRRE-KAKMELQEII 107
Score = 87 (35.7 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 201 GYADYVITEDSDLLVFGAKKIIYKLDLSGNC 231
G+ I+EDSDLLV+G +++YKL +G C
Sbjct: 166 GFISCAISEDSDLLVYGCPRVLYKLKNTGEC 196
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 247 LAKFTDAKFRYMCILSGCDYWTG--IKGMGLKKAKDYVF 283
L F F MC+LSGCDY I GMG+K A + +F
Sbjct: 330 LQYFNIDMFLTMCVLSGCDYSNDFHITGMGIKTAYNLIF 368
>GENEDB_PFALCIPARUM|PF10_0080 [details] [associations]
symbol:PF10_0080 "endonuclease, putative"
species:5833 "Plasmodium falciparum" [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR006084 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR020045 Pfam:PF00867 PRINTS:PR00853
SMART:SM00279 GO:GO:0005739 GO:GO:0003677 GO:GO:0006281
GO:GO:0090305 GO:GO:0004519 EMBL:AE014185 PANTHER:PTHR11081
SUPFAM:SSF47807 HSSP:O29975 RefSeq:XP_001347365.1
ProteinModelPortal:Q8IJW1 EnsemblProtists:PF10_0080:mRNA
GeneID:810238 KEGG:pfa:PF10_0080 EuPathDB:PlasmoDB:PF3D7_1008200
HOGENOM:HOG000283088 ProtClustDB:CLSZ2431727 Uniprot:Q8IJW1
Length = 388
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 52/189 (27%), Positives = 83/189 (43%)
Query: 123 CDYWTGIKGMGLKK---AKDYVFSIMDPDFENALRKINVYGKIGSYVK--ITKEFLTSGA 177
CD I + KK K+ + I+D D + L K N++ KI S I L
Sbjct: 178 CDQKNNISNICEKKNLKKKNQMEIIVDEDGIHDLFKKNIFIKINSKTANDIYNYLLLENI 237
Query: 178 PQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE 237
P F +N+ + D V+++D+D L FGA +I + +++E
Sbjct: 238 PI-FITKNDAEKECAIQCSHE----RDIVVSDDTDALAFGAPNLIRFITNKKKRHIINKE 292
Query: 238 KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV--FSIMDPDFE-NRK 294
+L + L + +F D CILSGCDY I G+G KA + + + ++ E N
Sbjct: 293 ELLNELNINYEQFID-----FCILSGCDYSAKIPGIGPVKAHEIIKKYKTIETFLESNAF 347
Query: 295 EYVKYAKVF 303
K +K+F
Sbjct: 348 NKYKNSKLF 356
>UNIPROTKB|Q8IJW1 [details] [associations]
symbol:PF10_0080 "Endonuclease, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR006084 InterPro:IPR006086
InterPro:IPR008918 InterPro:IPR020045 Pfam:PF00867 PRINTS:PR00853
SMART:SM00279 GO:GO:0005739 GO:GO:0003677 GO:GO:0006281
GO:GO:0090305 GO:GO:0004519 EMBL:AE014185 PANTHER:PTHR11081
SUPFAM:SSF47807 HSSP:O29975 RefSeq:XP_001347365.1
ProteinModelPortal:Q8IJW1 EnsemblProtists:PF10_0080:mRNA
GeneID:810238 KEGG:pfa:PF10_0080 EuPathDB:PlasmoDB:PF3D7_1008200
HOGENOM:HOG000283088 ProtClustDB:CLSZ2431727 Uniprot:Q8IJW1
Length = 388
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 52/189 (27%), Positives = 83/189 (43%)
Query: 123 CDYWTGIKGMGLKK---AKDYVFSIMDPDFENALRKINVYGKIGSYVK--ITKEFLTSGA 177
CD I + KK K+ + I+D D + L K N++ KI S I L
Sbjct: 178 CDQKNNISNICEKKNLKKKNQMEIIVDEDGIHDLFKKNIFIKINSKTANDIYNYLLLENI 237
Query: 178 PQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDRE 237
P F +N+ + D V+++D+D L FGA +I + +++E
Sbjct: 238 PI-FITKNDAEKECAIQCSHE----RDIVVSDDTDALAFGAPNLIRFITNKKKRHIINKE 292
Query: 238 KLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYV--FSIMDPDFE-NRK 294
+L + L + +F D CILSGCDY I G+G KA + + + ++ E N
Sbjct: 293 ELLNELNINYEQFID-----FCILSGCDYSAKIPGIGPVKAHEIIKKYKTIETFLESNAF 347
Query: 295 EYVKYAKVF 303
K +K+F
Sbjct: 348 NKYKNSKLF 356
>FB|FBgn0025832 [details] [associations]
symbol:Fen1 "Flap endonuclease 1" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC] [GO:0048256 "flap
endonuclease activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0004519 "endonuclease activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] HAMAP:MF_00614 InterPro:IPR003583 InterPro:IPR006084
InterPro:IPR006085 InterPro:IPR006086 InterPro:IPR008918
InterPro:IPR019974 InterPro:IPR020045 InterPro:IPR023426
Pfam:PF00752 Pfam:PF00867 PRINTS:PR00853 PROSITE:PS00841
PROSITE:PS00842 SMART:SM00278 SMART:SM00279 SMART:SM00484
SMART:SM00485 EMBL:AE013599 GO:GO:0005739 GO:GO:0005654
GO:GO:0005730 GO:GO:0022008 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0004527 GO:GO:0004519
eggNOG:COG0258 PANTHER:PTHR11081 SUPFAM:SSF47807 EMBL:AL031863
CTD:2237 GeneTree:ENSGT00640000091478 KO:K04799 OMA:DYDSLLF
EMBL:BT100031 PIR:T13692 RefSeq:NP_523765.1 UniGene:Dm.23253
HSSP:O50123 ProteinModelPortal:Q7K7A9 SMR:Q7K7A9 STRING:Q7K7A9
PaxDb:Q7K7A9 PRIDE:Q7K7A9 EnsemblMetazoa:FBtr0087075 GeneID:36887
KEGG:dme:Dmel_CG8648 UCSC:CG8648-RA FlyBase:FBgn0025832
InParanoid:Q7K7A9 OrthoDB:EOG4W0VVR PhylomeDB:Q7K7A9
GenomeRNAi:36887 NextBio:800894 Bgee:Q7K7A9 Uniprot:Q7K7A9
Length = 385
Score = 115 (45.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/124 (33%), Positives = 58/124 (46%)
Query: 165 YVKITKEFLT-SGAPQPFGARNEGRSLLSAVTERNIAGYADYVITEDSDLLVFGAKKIIY 223
+ K KE LT G P A E + +A+ + AG TED D L FG+ K++
Sbjct: 137 HAKEAKELLTLMGVPY-VDAPCEAEAQCAALVK---AGKVYATATEDMDALTFGSTKLLR 192
Query: 224 KLDLSGNCCFMDREKLPSALKMPLAKFTDAKFRYMCILSGCDYWTGIKGMGLKKAKDYVF 283
L S +E L LA + +F +CIL GCDY IKG+G K+A + +
Sbjct: 193 YLTYSEARKMPVKEFSYDKLLEGLA-INNREFIDLCILLGCDYCESIKGIGPKRAIELIN 251
Query: 284 SIMD 287
+ D
Sbjct: 252 TYRD 255
Score = 48 (22.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 32 LLAHKIKVIMVFDGR--HLPAKE-ATEEDRRKRAE 63
LL + IK + VFDG+ L + E A +RR+ AE
Sbjct: 74 LLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAE 108
>UNIPROTKB|Q5T398 [details] [associations]
symbol:EXO1 "Exonuclease 1" species:9606 "Homo sapiens"
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR019974 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00842 SMART:SM00484 SMART:SM00485
GO:GO:0006281 GO:GO:0004527 GO:GO:0090305 PANTHER:PTHR11081
EMBL:AL365366 UniGene:Hs.498248 HGNC:HGNC:3511 HOGENOM:HOG000264445
IPI:IPI00644243 SMR:Q5T398 STRING:Q5T398 Ensembl:ENST00000437497
Uniprot:Q5T398
Length = 166
Score = 106 (42.4 bits), Expect = 0.00085, P = 0.00085
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 239
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L
Sbjct: 116 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARL 157
>UNIPROTKB|Q5T397 [details] [associations]
symbol:EXO1 "Exonuclease 1" species:9606 "Homo sapiens"
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR006084 InterPro:IPR006085
InterPro:IPR006086 InterPro:IPR019974 Pfam:PF00752 Pfam:PF00867
PRINTS:PR00853 PROSITE:PS00842 SMART:SM00484 SMART:SM00485
GO:GO:0006281 GO:GO:0004527 GO:GO:0090305 PANTHER:PTHR11081
EMBL:AL365366 UniGene:Hs.498248 HGNC:HGNC:3511 IPI:IPI00844071
SMR:Q5T397 STRING:Q5T397 Ensembl:ENST00000423131
HOGENOM:HOG000264445 Uniprot:Q5T397
Length = 169
Score = 106 (42.4 bits), Expect = 0.00097, P = 0.00097
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 198 NIAGYADYVITEDSDLLVFGAKKIIYKLDLSGNCCFMDREKL 239
N AG +ITEDSDLL FG KK+I K+D GN +D+ +L
Sbjct: 119 NKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARL 160
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.140 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 443 443 0.00090 118 3 11 22 0.45 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 613 (65 KB)
Total size of DFA: 267 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.06u 0.08s 37.14t Elapsed: 00:00:13
Total cpu time: 37.07u 0.08s 37.15t Elapsed: 00:00:13
Start: Thu Aug 15 11:20:45 2013 End: Thu Aug 15 11:20:58 2013