Query psy11832
Match_columns 494
No_of_seqs 360 out of 2440
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 20:07:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3glr_A NAD-dependent deacetyla 100.0 3.2E-60 1.1E-64 473.9 16.9 197 1-231 34-230 (285)
2 1j8f_A SIRT2, sirtuin 2, isofo 100.0 1.2E-57 4.3E-62 464.1 25.2 202 1-235 54-257 (323)
3 1q1a_A HST2 protein; ternary c 100.0 1.6E-54 5.6E-59 435.7 21.4 201 1-234 31-247 (289)
4 1q14_A HST2 protein; histone d 100.0 5.7E-54 1.9E-58 442.1 18.9 202 1-235 39-256 (361)
5 4iao_A NAD-dependent histone d 100.0 3.2E-53 1.1E-57 445.0 20.0 187 1-218 195-416 (492)
6 1yc5_A NAD-dependent deacetyla 100.0 7E-52 2.4E-56 407.6 16.3 203 1-243 24-226 (246)
7 1ma3_A SIR2-AF2, transcription 100.0 2.5E-51 8.5E-56 405.2 14.7 203 1-243 26-229 (253)
8 1m2k_A Silent information regu 100.0 1.2E-51 4E-56 406.7 10.2 202 1-244 23-224 (249)
9 3u31_A SIR2A, transcriptional 100.0 6.3E-51 2.1E-55 408.3 13.5 197 1-238 56-257 (290)
10 2hjh_A NAD-dependent histone d 100.0 3.9E-50 1.3E-54 414.0 17.3 202 1-236 57-293 (354)
11 3riy_A NAD-dependent deacetyla 100.0 1.6E-50 5.4E-55 403.4 11.0 208 1-247 32-262 (273)
12 1s5p_A NAD-dependent deacetyla 100.0 1.2E-49 3.9E-54 389.3 9.7 201 1-244 12-214 (235)
13 3k35_A NAD-dependent deacetyla 100.0 1.3E-44 4.3E-49 364.9 9.5 161 85-247 87-256 (318)
14 3pki_A NAD-dependent deacetyla 100.0 3.3E-44 1.1E-48 364.7 7.3 161 85-247 87-256 (355)
15 3glr_A NAD-dependent deacetyla 100.0 2.4E-36 8.2E-41 301.6 1.6 183 231-454 89-274 (285)
16 1j8f_A SIRT2, sirtuin 2, isofo 100.0 1.8E-34 6E-39 293.7 4.9 195 231-493 109-308 (323)
17 2hjh_A NAD-dependent histone d 100.0 1.5E-32 5.3E-37 282.9 9.6 182 231-454 111-330 (354)
18 4iao_A NAD-dependent histone d 100.0 9.7E-32 3.3E-36 282.4 6.3 178 231-450 249-461 (492)
19 3k35_A NAD-dependent deacetyla 100.0 6E-32 2.1E-36 272.6 3.6 166 232-404 89-274 (318)
20 1yc5_A NAD-dependent deacetyla 100.0 1.3E-31 4.3E-36 263.4 5.4 161 231-401 73-245 (246)
21 3pki_A NAD-dependent deacetyla 100.0 1.1E-31 3.7E-36 272.9 1.9 166 232-404 89-274 (355)
22 1ma3_A SIR2-AF2, transcription 100.0 1.8E-30 6.1E-35 256.2 4.7 158 232-399 76-246 (253)
23 1m2k_A Silent information regu 100.0 3.1E-30 1E-34 253.9 3.4 157 231-400 73-241 (249)
24 1q1a_A HST2 protein; ternary c 100.0 7.4E-30 2.5E-34 256.4 6.2 186 231-454 86-288 (289)
25 1s5p_A NAD-dependent deacetyla 100.0 5.1E-30 1.7E-34 250.3 2.2 155 232-399 65-230 (235)
26 1q14_A HST2 protein; histone d 100.0 2.6E-29 8.8E-34 258.7 6.6 189 231-457 94-299 (361)
27 3u31_A SIR2A, transcriptional 100.0 1.4E-29 4.9E-34 253.5 4.4 157 231-398 106-278 (290)
28 3riy_A NAD-dependent deacetyla 100.0 9.2E-30 3.1E-34 253.6 2.4 158 231-396 82-272 (273)
29 4ayb_P DNA-directed RNA polyme 82.2 0.53 1.8E-05 33.5 1.5 30 280-315 3-32 (48)
30 2lcq_A Putative toxin VAPC6; P 73.0 1.1 3.7E-05 40.2 1.2 28 136-171 132-159 (165)
31 3a43_A HYPD, hydrogenase nicke 72.6 1.3 4.3E-05 39.0 1.5 43 273-315 63-116 (139)
32 2k5c_A Uncharacterized protein 70.6 2.7 9.1E-05 33.4 2.8 53 135-193 7-78 (95)
33 6rxn_A Rubredoxin; electron tr 68.2 1.3 4.5E-05 31.5 0.5 35 134-169 2-39 (46)
34 3na7_A HP0958; flagellar bioge 65.3 4.8 0.00016 38.7 4.0 41 126-170 192-232 (256)
35 1lko_A Rubrerythrin all-iron(I 60.6 2.2 7.6E-05 39.3 0.7 27 134-169 153-180 (191)
36 2kdx_A HYPA, hydrogenase/ureas 58.9 3.4 0.00012 35.0 1.5 27 279-315 72-99 (119)
37 2kdx_A HYPA, hydrogenase/ureas 56.4 4.4 0.00015 34.3 1.7 27 135-169 72-99 (119)
38 2lcq_A Putative toxin VAPC6; P 54.7 3.9 0.00013 36.5 1.2 27 279-315 131-157 (165)
39 1twf_L ABC10-alpha, DNA-direct 53.9 10 0.00034 29.3 3.3 27 279-314 27-53 (70)
40 2gmg_A Hypothetical protein PF 52.8 8.5 0.00029 32.1 2.8 34 278-321 65-98 (105)
41 3hww_A 2-succinyl-5-enolpyruvy 52.5 16 0.00054 38.9 5.7 47 188-238 271-317 (556)
42 1yuz_A Nigerythrin; rubrythrin 49.0 7 0.00024 36.3 2.0 26 134-169 169-195 (202)
43 3a43_A HYPD, hydrogenase nicke 46.9 2.8 9.6E-05 36.7 -1.1 24 127-150 61-84 (139)
44 2k5c_A Uncharacterized protein 45.6 11 0.00038 29.9 2.3 26 275-300 3-28 (95)
45 3pwf_A Rubrerythrin; non heme 44.3 8.5 0.00029 34.8 1.7 26 135-169 137-162 (170)
46 2c31_A Oxalyl-COA decarboxylas 40.7 19 0.00065 38.3 4.1 47 190-238 267-313 (568)
47 1pno_A NAD(P) transhydrogenase 40.4 48 0.0016 29.9 5.9 69 322-399 84-179 (180)
48 2fsv_C NAD(P) transhydrogenase 39.8 55 0.0019 30.1 6.3 69 322-399 107-202 (203)
49 2bru_C NAD(P) transhydrogenase 39.6 28 0.00094 31.6 4.2 35 320-363 89-123 (186)
50 1d4o_A NADP(H) transhydrogenas 39.0 39 0.0013 30.6 5.1 70 322-400 83-179 (184)
51 2vk8_A Pyruvate decarboxylase 36.8 20 0.00069 38.0 3.5 48 188-239 271-318 (563)
52 1djl_A Transhydrogenase DIII; 34.8 48 0.0016 30.6 5.1 70 322-400 106-202 (207)
53 3lq1_A 2-succinyl-5-enolpyruvy 34.5 42 0.0014 35.7 5.5 44 191-238 285-328 (578)
54 2q28_A Oxalyl-COA decarboxylas 33.8 27 0.00093 37.0 3.9 45 190-238 265-309 (564)
55 1ovm_A Indole-3-pyruvate decar 33.7 23 0.00079 37.4 3.3 47 188-238 269-315 (552)
56 1ytl_A Acetyl-COA decarboxylas 31.9 29 0.00099 31.3 3.2 34 194-231 107-142 (174)
57 3cf4_G Acetyl-COA decarboxylas 31.5 25 0.00085 31.2 2.7 36 191-231 103-140 (170)
58 1e8j_A Rubredoxin; iron-sulfur 31.1 8.7 0.0003 27.9 -0.4 34 135-168 2-44 (52)
59 1lko_A Rubrerythrin all-iron(I 31.0 17 0.00058 33.3 1.5 28 278-315 153-180 (191)
60 1pgv_A TMD-1, tropomodulin TMD 30.7 19 0.00064 33.3 1.7 22 433-454 56-77 (197)
61 2vbi_A Pyruvate decarboxylase; 30.6 27 0.00091 37.1 3.2 45 189-237 270-314 (566)
62 1q6z_A BFD, BFDC, benzoylforma 30.6 28 0.00095 36.6 3.3 48 188-238 259-306 (528)
63 2gnr_A Conserved hypothetical 30.5 20 0.00067 31.5 1.7 29 275-315 42-70 (145)
64 4feg_A Pyruvate oxidase; carba 30.3 37 0.0013 36.3 4.3 44 189-238 270-313 (603)
65 2v3b_B Rubredoxin 2, rubredoxi 30.1 7.5 0.00026 28.5 -0.9 35 135-169 2-45 (55)
66 1dx8_A Rubredoxin; electron tr 30.0 25 0.00084 27.1 2.0 37 133-169 4-49 (70)
67 2kn9_A Rubredoxin; metalloprot 29.7 9.1 0.00031 30.4 -0.5 36 134-169 25-69 (81)
68 3h0g_L DNA-directed RNA polyme 29.7 26 0.00087 26.5 2.0 27 136-169 21-47 (63)
69 1ybh_A Acetolactate synthase, 29.2 45 0.0016 35.5 4.7 48 188-239 271-318 (590)
70 2vbf_A Branched-chain alpha-ke 28.2 32 0.0011 36.5 3.3 46 188-237 288-333 (570)
71 2wvg_A PDC, pyruvate decarboxy 28.1 26 0.00089 37.2 2.5 44 190-237 271-314 (568)
72 3l5o_A Uncharacterized protein 27.3 34 0.0012 33.2 3.0 71 188-264 179-251 (270)
73 3irb_A Uncharacterized protein 27.1 24 0.00083 30.8 1.7 28 276-315 43-70 (145)
74 4rxn_A Rubredoxin; electron tr 26.7 23 0.00077 25.9 1.2 35 135-169 2-45 (54)
75 2pgn_A Cyclohexane-1,2-dione h 26.6 43 0.0015 35.7 3.9 46 188-238 264-309 (589)
76 2pan_A Glyoxylate carboligase; 25.5 60 0.002 34.8 4.8 45 189-237 287-331 (616)
77 2h1q_A Hypothetical protein; Z 25.5 39 0.0013 32.8 3.0 69 189-263 180-250 (270)
78 3pwf_A Rubrerythrin; non heme 24.5 36 0.0012 30.6 2.4 26 279-315 137-162 (170)
79 1yk4_A Rubredoxin, RD; electro 24.0 36 0.0012 24.5 1.9 34 136-169 2-44 (52)
80 1s24_A Rubredoxin 2; electron 23.8 31 0.001 27.7 1.6 35 134-168 33-76 (87)
81 2uz1_A Benzaldehyde lyase; thi 23.5 48 0.0016 35.1 3.6 43 193-239 267-310 (563)
82 2iht_A Carboxyethylarginine sy 23.2 62 0.0021 34.3 4.4 46 189-239 281-327 (573)
83 2epq_A POZ-, at HOOK-, and zin 23.1 71 0.0024 20.5 3.2 38 130-167 4-45 (45)
84 2lv2_A Insulinoma-associated p 23.1 70 0.0024 24.9 3.6 45 270-314 18-64 (85)
85 2x7j_A 2-succinyl-5-enolpyruvy 23.0 88 0.003 33.4 5.5 44 191-239 306-349 (604)
86 3na7_A HP0958; flagellar bioge 22.2 56 0.0019 31.0 3.4 40 270-315 192-231 (256)
87 2nxw_A Phenyl-3-pyruvate decar 22.0 46 0.0016 35.3 3.1 46 188-237 282-327 (565)
88 2gnr_A Conserved hypothetical 21.8 27 0.00091 30.6 0.9 28 132-169 43-70 (145)
89 2jrp_A Putative cytoplasmic pr 21.4 19 0.00066 28.5 -0.1 24 136-170 18-41 (81)
90 3nw0_A Non-structural maintena 20.2 57 0.002 30.9 3.0 33 137-169 194-226 (238)
No 1
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=100.00 E-value=3.2e-60 Score=473.94 Aligned_cols=197 Identities=57% Similarity=1.039 Sum_probs=174.1
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|++.++..
T Consensus 34 ISteSGIPdFR~~~~Glw~~~~~~~l~~pe~~~~~~~f~~~P~~f~~~~~~~~~~------------------------- 88 (285)
T 3glr_A 34 ISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPG------------------------- 88 (285)
T ss_dssp GTGGGTCCCTTSSSSHHHHHHHTTCCSSGGGGGCHHHHHHCCHHHHHHHHHHSTT-------------------------
T ss_pred cchhhCCCCcccCCCccccchhccCCCCHHHHhCHHHHhhCcHHHHHHHHHhhhc-------------------------
Confidence 7899999999998459999988889888999999999999999999998877642
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI 160 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~ 160 (494)
+++||++|++|++|+++|++++||||||||||++||+|+++|+|+||++++.+|+.|++.|+.+++...+....+
T Consensus 89 -----~a~Pn~~H~~La~Le~~g~l~~viTQNIDgLh~rAG~~~~~VielHGs~~~~~C~~C~~~~~~~~~~~~i~~~~~ 163 (285)
T 3glr_A 89 -----NYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRV 163 (285)
T ss_dssp -----SCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEEEGGGGHHHHHTTCC
T ss_pred -----cCCCCHHHHHHHHHHHcCCCceEEeeeecchHhhcCCCcccEEEecCCCCeEEECCCCCcCCHHHHHHHhhcCCC
Confidence 456777777777799999999999999999999999999999999999999999999999988777666777789
Q ss_pred CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEe
Q psy11832 161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIM 231 (494)
Q Consensus 161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN 231 (494)
|+|+.|||.|||+||||||++|...+ .+.+++++||++|||||||+|+|+++++..+ ..++.+|+||
T Consensus 164 P~C~~Cgg~lrP~IV~FGE~lp~~~~-~~~~~~~~aDlllviGTSl~V~Paa~l~~~~---~~~~~~v~IN 230 (285)
T 3glr_A 164 PRCPVCTGVVKPDIVFFGEPLPQRFL-LHVVDFPMADLLLILGTSLEVEPFASLTEAV---RSSVPRLLIN 230 (285)
T ss_dssp CBCTTTCCBEEEEECCTTSBCCGGGG-GHHHHHHHCSEEEEESCCCCEETTGGGGGSS---CTTSCEEEEE
T ss_pred CCCCCCCCccCCcEEEeCCcCCHHHH-HHHHHHhcCCEEEEeCCCCccccHHHHHHHH---hCCCcEEEEC
Confidence 99999999999999999999999877 4577889999999999999999999998765 2344555555
No 2
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=100.00 E-value=1.2e-57 Score=464.05 Aligned_cols=202 Identities=64% Similarity=1.145 Sum_probs=180.5
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|++.++.
T Consensus 54 iSt~SGIPdfR~~~~Glw~~~~~~~l~~p~~~~~~~~f~~~p~~f~~~~r~~~~-------------------------- 107 (323)
T 1j8f_A 54 ISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYP-------------------------- 107 (323)
T ss_dssp GTGGGTCCCTTCSCSTTSTTTTTTCCSSGGGGGBHHHHHHCCHHHHHHHHHHSS--------------------------
T ss_pred hhHhhCCCcccCCCccHHHHhhhcCCCCHHHHcCHHHHhcCHHHHHHHHHHHhh--------------------------
Confidence 689999999999944999998888888899999999999999999999877653
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCC--CCcccchHHHHHHHhhc
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLT--CRKDYSVAWMKERIFAE 158 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~--C~~~~~~~~~~~~i~~~ 158 (494)
.+++||++|++|++|+++|++++||||||||||++||+|+++|+|+||+++..+|++ |++.|+.++..+.+...
T Consensus 108 ----~~a~Pn~~H~aLa~L~~~g~~~~viTQNIDgLh~~AG~~~~~VielHGs~~~~~C~~~~C~~~~~~~~~~~~i~~~ 183 (323)
T 1j8f_A 108 ----GQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE 183 (323)
T ss_dssp ----SSCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEESCTTTCCEECHHHHHHHHHTT
T ss_pred ----CcCCCCHHHHHHHHHHhcCCCcEEEeecccchHHHcCCCcccEEEeeCCcceeecCCCccCccccHHHHHHhhccC
Confidence 356777777788889999999999999999999999999999999999999999999 99999988887777777
Q ss_pred CCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832 159 VIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL 235 (494)
Q Consensus 159 ~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~ 235 (494)
.+|+||.|||.|||+||||||++|...++.+.+++++||++||||||++|+|+++|+.+++ .+...|+||.+++
T Consensus 184 ~~P~C~~Cgg~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V~P~a~l~~~~~---~~~~~v~IN~~~t 257 (323)
T 1j8f_A 184 VTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAP---LSTPRLLINKEKA 257 (323)
T ss_dssp CCCBCTTTCCBEEEEECCBTSCCCHHHHHHHHHGGGSCSEEEEESSCSCSHHHHHHHTTSC---TTCCEEEEESSCC
T ss_pred CCCCCcCCCCccCCCEEecCCcCCHHHHHHHHHHHhCCCEEEEEeeCcccHHHHHHHHHHH---cCCcEEEEeCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999872 2344566664433
No 3
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=100.00 E-value=1.6e-54 Score=435.74 Aligned_cols=201 Identities=47% Similarity=0.874 Sum_probs=173.4
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|+++++.
T Consensus 31 iSt~SGIPdfR~~~~Glw~~~~~~~l~~~e~~~~~~~f~~~p~~f~~~~~~~~~-------------------------- 84 (289)
T 1q1a_A 31 ISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYP-------------------------- 84 (289)
T ss_dssp GGGGGTCCCSSSTTTSGGGSCGGGCCSSGGGGGBHHHHHHCCHHHHHHHHHHCS--------------------------
T ss_pred eeHhhCCCCcCCCCCcccccccccCCCCHHHhcCHHHHhcCHHHHHHHHHHHhh--------------------------
Confidence 689999999999944999998888888899999999999999999999877652
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhh---
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFA--- 157 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~--- 157 (494)
.+++||++|++|++|+++|++++||||||||||++||+++++|+|+||+++..+|++|++.|+.++....+..
T Consensus 85 ----~~a~Pn~~H~~La~L~~~g~~~~viTQNVDgLh~~AG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~ 160 (289)
T 1q1a_A 85 ----GNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPI 160 (289)
T ss_dssp ----SSCCCCHHHHHHHHHHHTTCEEEEEECCSSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECHHHHHHHHTCSSC
T ss_pred ----CcCCCCHHHHHHHHHHhCCCccEEEecCccchHHHcCCCcccEEEecCCcCceEECCCCCCCcHHHHHHHHhhccC
Confidence 3567788888888899999999999999999999999988999999999999999999999988777666633
Q ss_pred cCCCCCCCCCCeeeeeEEecCCCCChHHHHHH-------------HhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCC
Q psy11832 158 EVIPTCEKCNGLVKPDIVFFGENLPSRYFHRV-------------DVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224 (494)
Q Consensus 158 ~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a-------------~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~ 224 (494)
..+|+||.|||.|||+||||||.+|...++.+ .+.+.+||++||||||++|+|+++|+..+ ..+
T Consensus 161 ~~~P~C~~Cgg~lrP~vv~FGE~lp~~~~~~~~~~~~~l~~~~~a~~~~~~~DlllviGTSl~V~Pa~~l~~~~---~~~ 237 (289)
T 1q1a_A 161 KDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI---PRK 237 (289)
T ss_dssp CSCCBCTTTCCBEEEEECCBTSBCCHHHHHHHHHHHHHHHHHHHC----CCCCEEEEESCCCCEETTTHHHHHS---CTT
T ss_pred CCCccCCCCCCEECCCEEEcCCCCCHHHHHHHHHhhhhhhhhhhHHHHhccCCEEEEEccCCChhhHHHHHHHH---hcC
Confidence 36899999999999999999999999865544 34578999999999999999999999887 247
Q ss_pred ceEEEEeccc
Q psy11832 225 ADLLLIMGTS 234 (494)
Q Consensus 225 a~lv~IN~~p 234 (494)
+++|+||.+|
T Consensus 238 ~~~v~IN~~~ 247 (289)
T 1q1a_A 238 VKRVLCNLET 247 (289)
T ss_dssp SEEEEESSSC
T ss_pred CCEEEEECCC
Confidence 7777777443
No 4
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=100.00 E-value=5.7e-54 Score=442.05 Aligned_cols=202 Identities=47% Similarity=0.846 Sum_probs=162.1
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+++|+|+++.++++++|++++++++|.+||+.||+|+++++
T Consensus 39 ISteSGIPdFR~~~~Glw~~~~~~~l~~pe~~~s~~~f~~~P~~f~~~~~~~~--------------------------- 91 (361)
T 1q14_A 39 ISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELY--------------------------- 91 (361)
T ss_dssp GTGGGC--------------CCCCCCSSGGGGGBHHHHHHCCHHHHHHHTTTS---------------------------
T ss_pred cchhcCCcccccCcchhhhcccccCCCCHHHhcCHHHHhcCHHHHHHHHHHHh---------------------------
Confidence 78999999999994499999888888889999999999999999999887644
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhh---
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFA--- 157 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~--- 157 (494)
+.+++||.+|++|++|+++|++++||||||||||++||+++++|+|+||+++.++|+.|++.|+.+++...+..
T Consensus 92 ---~~~a~Pn~~H~aLa~Le~~g~~~~ViTQNVDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~ 168 (361)
T 1q14_A 92 ---PGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPI 168 (361)
T ss_dssp ---CCCCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECTHHHHHHTTSSSC
T ss_pred ---hCcCCCCHHHHHHHHHHhcCCCcEEEecccchhHhHcCCCcceEEeccccccccCcCCCCccCcHHHHHHHHhhccc
Confidence 23567888888888899999999999999999999999988999999999999999999999988777665533
Q ss_pred cCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHh-------------HcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCC
Q psy11832 158 EVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDV-------------DFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPK 224 (494)
Q Consensus 158 ~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~-------------~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~ 224 (494)
..+|+||.|||.|||+||||||.+|...++.+.+ .+.+||++||||||+.|+|+++|+..+ ..+
T Consensus 169 ~~~P~Cp~Cgg~lrP~VV~FGE~lp~~~~~~~~~a~~~l~~~i~~~~~~~~aDllLviGTSl~V~Paa~l~~~~---~~g 245 (361)
T 1q14_A 169 KDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEI---PRK 245 (361)
T ss_dssp SCCCBCTTTCCBEEEEECCBTSCCCHHHHHHHHHHHHHHHHC--------CCCEEEEESCCCCSTTGGGHHHHS---CTT
T ss_pred CCCCCCcCCCCEeCCCcccccccCCHHHHHHHHHHHHhhhhcchhhhhhccCCEEEEECCCCCchhHHHHHHHH---hcC
Confidence 2479999999999999999999999988776665 578999999999999999999999987 247
Q ss_pred ceEEEEecccc
Q psy11832 225 ADLLLIMGTSL 235 (494)
Q Consensus 225 a~lv~IN~~p~ 235 (494)
+.+|+||.+|+
T Consensus 246 ~~~v~IN~~~t 256 (361)
T 1q14_A 246 VKRVLCNLETV 256 (361)
T ss_dssp SEEEEESSSCC
T ss_pred CeEEEEeCCCc
Confidence 77888885444
No 5
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-53 Score=444.96 Aligned_cols=187 Identities=41% Similarity=0.770 Sum_probs=168.8
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+ +|+|+++.++++.+|++++++++|.+||+.||++++..+.
T Consensus 195 ISTeSGIPDFRs~-~GLw~~~~~~gl~~Pe~v~s~~~F~~dP~~Fy~~~r~~~~-------------------------- 247 (492)
T 4iao_A 195 VSTSLGIPDFRSS-EGFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLP-------------------------- 247 (492)
T ss_dssp GGGGGTCCCSSST-TSHHHHHHTSCCSCGGGGGBHHHHHHCHHHHHHHGGGGCC--------------------------
T ss_pred cccccCCccccCc-hHHHHhhhhcCCCCHHHhcCHHHHhhChHHHHHHHHHhhC--------------------------
Confidence 7899999999999 6999998888888899999999999999999998765442
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI 160 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~ 160 (494)
..++||++|++|++|+++|++.+||||||||||++||+++++|+|+||++++.+|..|++.++.+++.+.+....+
T Consensus 248 ----~~~~Pn~aH~aLa~Le~~G~l~~VITQNIDgLHqrAG~~s~~ViELHGsl~~~~C~~Cg~~~~~e~i~~~i~~~~~ 323 (492)
T 4iao_A 248 ----PEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLEL 323 (492)
T ss_dssp ----CSSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTCCTTEEEETTTCCEEEGGGGHHHHHTTCC
T ss_pred ----CcCCCCHHHHHHHHHHHCCCCceeEeccccchHhhcCCChhhEEeecCccceeecCCCCCcCCHHHHHHHHhccCC
Confidence 3456777788888899999999999999999999999999999999999999999999999887766666656667
Q ss_pred CCCCCCC-----------------------------------CeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcC
Q psy11832 161 PTCEKCN-----------------------------------GLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTS 205 (494)
Q Consensus 161 P~C~~Cg-----------------------------------g~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTS 205 (494)
|+|+.|+ |.|||+||||||++|...++.+.+++++||++||||||
T Consensus 324 P~Cp~Cg~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~c~~cgG~LRPdIVfFGE~LP~~~~~~a~~~~~~aDLlLVIGTS 403 (492)
T 4iao_A 324 PLCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTS 403 (492)
T ss_dssp CBCTTTHHHHHHHSTTCCCCC--------CCTTCCTTCCTTTTBEEESSCCBTSBCCHHHHHHHHHHTTTCSEEEEESCC
T ss_pred CCCcccccccccccccccccccccccccccccccccccccCCCcCCCCEEECCCCCCHHHHHHHHHHHhhCCEEEEeccC
Confidence 8887774 99999999999999999999999999999999999999
Q ss_pred CChhhhhhhhhhh
Q psy11832 206 LVVQPFCSLVDKV 218 (494)
Q Consensus 206 l~V~pa~~lv~~~ 218 (494)
|+|+|+++|+..+
T Consensus 404 L~VyPaA~Lv~~a 416 (492)
T 4iao_A 404 LKVAPVSEIVNMV 416 (492)
T ss_dssp CCEETGGGHHHHS
T ss_pred CCccchhhHHHHH
Confidence 9999999999876
No 6
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=100.00 E-value=7e-52 Score=407.63 Aligned_cols=203 Identities=34% Similarity=0.599 Sum_probs=173.3
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+ +|+|+++ ++ +++++++|.+||+.||+|+++++.
T Consensus 24 iS~~SGIpdfR~~-~Glw~~~------~~-~~~~~~~f~~~p~~~~~~~~~~~~-------------------------- 69 (246)
T 1yc5_A 24 ISTPSGIPDFRGP-NGIYKKY------SQ-NVFDIDFFYSHPEEFYRFAKEGIF-------------------------- 69 (246)
T ss_dssp GTGGGTCCCC------------------C-CTTBHHHHHHCHHHHHHHHHHHTG--------------------------
T ss_pred eehhhCCCCccCC-CcccccC------CC-ceecHHHHhhCHHHHHHHHHHHHH--------------------------
Confidence 7899999999999 5999864 36 899999999999999999987642
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI 160 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~ 160 (494)
.+.+++||++|++|++|+++|+.++||||||||||++||+ ++|+|+||+++..+|+.|++.|+.+++...+....+
T Consensus 70 --~~~~~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG~--~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~ 145 (246)
T 1yc5_A 70 --PMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDV 145 (246)
T ss_dssp --GGGGCCCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEEHHHHHHHTTTCSS
T ss_pred --HhccCCCCHHHHHHHHHHhcCCCceEEeccccchHhHcCC--CcEEEecCccceeEcCCCCCCCcHHHHHHHhccCCC
Confidence 2346899999999999999999999999999999999996 899999999999999999999988776665555578
Q ss_pred CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832 161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF 240 (494)
Q Consensus 161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~ 240 (494)
|+||.|||.|||+||||||++|+..++.+.+++++||++||||||++|+|+++++..+ ..+++++|+||.+|+.....
T Consensus 146 p~C~~Cgg~lrP~vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V~P~~~l~~~a--~~~g~~~i~IN~~~~~~d~~ 223 (246)
T 1yc5_A 146 PLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLIT--VRSGGKLVIVNLGETPFDDI 223 (246)
T ss_dssp CBCTTTCCBEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHH--HHHTCEEEEECSSCCTTGGG
T ss_pred CCCCCCCCccCcceEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCcchhHHHHHHHH--HHcCCeEEEEeCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999887 35689999999999987655
Q ss_pred ccc
Q psy11832 241 CSL 243 (494)
Q Consensus 241 a~l 243 (494)
+.+
T Consensus 224 ~~~ 226 (246)
T 1yc5_A 224 ATL 226 (246)
T ss_dssp CSE
T ss_pred eeE
Confidence 543
No 7
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=100.00 E-value=2.5e-51 Score=405.23 Aligned_cols=203 Identities=30% Similarity=0.559 Sum_probs=172.2
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+ +|+|+++ +|++++++++|.+||+.||+|+++++.
T Consensus 26 iS~~SGIPdfR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~~~f~~~~~~-------------------------- 72 (253)
T 1ma3_A 26 ISAESGIPTFRGE-DGLWRKY------DPEEVASISGFKRNPRAFWEFSMEMKD-------------------------- 72 (253)
T ss_dssp GSCC-----------CCSCSS------CHHHHTBHHHHTTCHHHHHHHHHHTHH--------------------------
T ss_pred hhHhhCCCCcCCC-CcccccC------ChhheecHHHHhcCHHHHHHHHHHHHH--------------------------
Confidence 6899999999999 5999864 489999999999999999999876531
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI 160 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~ 160 (494)
.+. ++||++|++|++|+++|+.++||||||||||++||+ ++|+|+||+++..+|+.|++.|+.++....+....+
T Consensus 73 --~~~-~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG~--~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~ 147 (253)
T 1ma3_A 73 --KLF-AEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGS--RRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEI 147 (253)
T ss_dssp --HHT-CCCCHHHHHHHHHHHTTSEEEEEESCCSCHHHHHTC--CSEEETTEEEEEEEETTTCCEEEGGGTHHHHHTTCC
T ss_pred --hcc-CCCCHHHHHHHHHHhcCCCeEEEeccccccHhHhCC--CCEEEeCCCcCeeeeCCCCCcCcHHHHHHHhccCCC
Confidence 123 889999999999999999999999999999999996 899999999999999999999887766655555578
Q ss_pred CCCCCCCC-eeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832 161 PTCEKCNG-LVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP 239 (494)
Q Consensus 161 P~C~~Cgg-~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~ 239 (494)
|+||.||| .|||+||||||++|...++.+.+++++||++||||||++|+|+++|+..+ ..+++++|+||.+|+....
T Consensus 148 p~C~~Cgg~~lrP~Vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V~P~~~l~~~a--~~~g~~~i~iN~~~~~~d~ 225 (253)
T 1ma3_A 148 PRCRKCGSYYVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIA--KKAGAKMIIVNAEPTMADP 225 (253)
T ss_dssp CCCTTTCCSCEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHH--HHHTCEEEEEESSCCTTGG
T ss_pred CCCCCCCCccccceEEEeCCCCCHHHHHHHHHHHHhCCEEEEECCCceeccHHHHHHHH--HHcCCeEEEEeCCCCCCCC
Confidence 99999999 99999999999999999999999999999999999999999999999887 4568999999999998765
Q ss_pred cccc
Q psy11832 240 FCSL 243 (494)
Q Consensus 240 ~a~l 243 (494)
.+.+
T Consensus 226 ~~~~ 229 (253)
T 1ma3_A 226 IFDV 229 (253)
T ss_dssp GCSE
T ss_pred ceeE
Confidence 5443
No 8
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=100.00 E-value=1.2e-51 Score=406.70 Aligned_cols=202 Identities=27% Similarity=0.460 Sum_probs=178.8
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+ +|+|+++ ++++++++++|.+||+.||+|+++++.
T Consensus 23 iS~~SGIPdfR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~w~~~~~~~~-------------------------- 69 (249)
T 1m2k_A 23 VSAESGIPTFRGK-DGLWNRY------RPEELANPQAFAKDPEKVWKWYAWRME-------------------------- 69 (249)
T ss_dssp GGGGGTCCCSSST-TCHHHHS------CHHHHSSHHHHHHCHHHHHHHHHHHHH--------------------------
T ss_pred hhhhhCCCCccCC-CcCccCC------CHHhcccHHHHhcCHHHHHHHHHHHHH--------------------------
Confidence 6899999999999 5999874 489999999999999999999876531
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI 160 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~ 160 (494)
...+++||++|++|++|+++|+.++||||||||||++||. ++|+|+||+++..+|+.|++.|+.++. +....+
T Consensus 70 --~~~~~~Pn~~H~~La~L~~~g~~~~viTQNiDgLh~~AG~--~~v~elHG~~~~~~C~~C~~~~~~~~~---~~~~~~ 142 (249)
T 1m2k_A 70 --KVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGS--RNVIHLHGSLRVVRCTSCNNSFEVESA---PKIPPL 142 (249)
T ss_dssp --HHHHCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTC--CSEEETTEEEEEEEESSSSCEEECSSC---CCSSSC
T ss_pred --HhCcCCCCHHHHHHHHHHhCCCCcEEEECCccchhhhcCC--CcEEEecCCcceeEeCCCCCcccchhh---ccCCCC
Confidence 1235799999999999999999999999999999999995 899999999999999999998765432 223358
Q ss_pred CCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccc
Q psy11832 161 PTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPF 240 (494)
Q Consensus 161 P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~ 240 (494)
|+||.|||.+||+||||||++|+..++.+.+++++||++||||||++|+|+++|+..+ ..+++++|+||.+|+.....
T Consensus 143 p~C~~Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~~~adlllviGTSl~V~P~~~l~~~a--~~~g~~~i~IN~~~~~~d~~ 220 (249)
T 1m2k_A 143 PKCDKCGSLLRPGVVWAGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIV--KQRGGAIIEINPDETPLTPI 220 (249)
T ss_dssp CBCSSSSSBEEEEECCTTSCCCHHHHHHHHHHHHHCSEEEEESCCSCSTTGGGHHHHH--HHTTCEEEEECSSCCTTGGG
T ss_pred CCCCCCCCCcCCeEEecCCCCCHHHHHHHHHHHhcCCEEEEEccCCCccchHHHHHHH--HHcCCeEEEEeCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999887 46799999999999987665
Q ss_pred cccc
Q psy11832 241 CSLV 244 (494)
Q Consensus 241 a~l~ 244 (494)
+.+.
T Consensus 221 ~~~~ 224 (249)
T 1m2k_A 221 ADYS 224 (249)
T ss_dssp CSEE
T ss_pred eeEE
Confidence 5443
No 9
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=100.00 E-value=6.3e-51 Score=408.31 Aligned_cols=197 Identities=24% Similarity=0.413 Sum_probs=174.5
Q ss_pred CcccCCCCCccC-CCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhh
Q psy11832 1 MFGAAGIPDFRS-PGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHF 79 (494)
Q Consensus 1 ~~~~SGIPdFRg-~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~ 79 (494)
|||+|||||||| + +|+|+++ +|++++++.+|.+||+.||+|+++++.
T Consensus 56 iSt~SGIPdFR~~~-~Glw~~~------~p~~~~~~~~f~~~p~~~w~~~~~~~~------------------------- 103 (290)
T 3u31_A 56 TSAESNIPSFRGSS-NSIWSKY------DPRIYGTIWGFWKYPEKIWEVIRDISS------------------------- 103 (290)
T ss_dssp GTGGGTCCSCTTCT-TSGGGGS------CHHHHTBHHHHHHCHHHHHHHHHHHHH-------------------------
T ss_pred cccccCCccccccc-cchhhcC------CHHHhhCHHhhhhCHHHHHHHHHHHhh-------------------------
Confidence 689999999999 6 6999875 488999999999999999999876431
Q ss_pred cccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHH----HHH
Q psy11832 80 TQVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMK----ERI 155 (494)
Q Consensus 80 ~~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~----~~i 155 (494)
..+++||++|++|++|+++|++++||||||||||++||+ ++|+|+||+++..+|..|++.|+.+... ..+
T Consensus 104 ----~~~a~Pn~~H~aLa~Le~~g~~~~viTQNVDgLh~rAG~--~~vielHGs~~~~~C~~C~~~~~~~~~~~~~~~~~ 177 (290)
T 3u31_A 104 ----DYEIEINNGHVALSTLESLGYLKSVVTQNVDGLHEASGN--TKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHF 177 (290)
T ss_dssp ----HSCCCCCHHHHHHHHHHHTTCEEEEEESCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEECCTGGGSTTSST
T ss_pred ----hccCCCCHHHHHHHHHHHcCCCceEEEechHHHHHHcCC--CcEEEecCCcCcceeCCCCCcCChhHhhhcccccc
Confidence 146789999999999999999999999999999999996 7999999999999999999988754322 112
Q ss_pred hhcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832 156 FAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL 235 (494)
Q Consensus 156 ~~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~ 235 (494)
....+|+|| |||.+||+||||||++|...++.|.+++++||++||||||++|+|+++|+..+ ..+++++|+||.+|+
T Consensus 178 ~~~~~P~C~-Cgg~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTSl~V~Paa~l~~~a--~~~g~~~v~IN~~~t 254 (290)
T 3u31_A 178 MHQLPPECP-CGGIFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTVSTATNLCHFA--CKKKKKIVEINISKT 254 (290)
T ss_dssp TTSSSCBCT-TSCBEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCSHHHHHHHHHH--HHTTCCEEEEESSCC
T ss_pred cccCCCCCC-CCCEECCeEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCCcchhHHHHHHHH--HHcCCEEEEECCCCC
Confidence 234589999 99999999999999999999999999999999999999999999999999987 467899999999999
Q ss_pred ccc
Q psy11832 236 VVQ 238 (494)
Q Consensus 236 ~~h 238 (494)
...
T Consensus 255 ~~~ 257 (290)
T 3u31_A 255 YIT 257 (290)
T ss_dssp TTT
T ss_pred CCC
Confidence 864
No 10
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-50 Score=414.04 Aligned_cols=202 Identities=39% Similarity=0.717 Sum_probs=181.5
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+ +|+|+++.++++.+|++++++++|.+||+.||+|++..+.
T Consensus 57 ISt~SGIPdFR~~-~Glw~~~~~~~l~~p~~~~~~~~F~~~P~~f~~~~~~~~~-------------------------- 109 (354)
T 2hjh_A 57 VSTSLGIPDFRSS-EGFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLP-------------------------- 109 (354)
T ss_dssp GGGGGTCCCSSST-TSHHHHTGGGCCSSGGGGGBHHHHHHCTHHHHHHGGGGCC--------------------------
T ss_pred hhHhhCCCcccCc-chHHHHHHhhcCCCHHHhCCHHHHhcCHHHHHHHHHHHcc--------------------------
Confidence 6899999999999 6999998888887899999999999999999998755432
Q ss_pred ccccCCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhcCC
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVI 160 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~ 160 (494)
..++||++|++|++|+++|++++||||||||||++||+++++|+|+|||++..+|++|+..|+.+.+.+.+....+
T Consensus 110 ----~~~~Pn~~H~aLa~Le~~g~l~~viTQNVDgLh~rAG~~~~~vielHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~ 185 (354)
T 2hjh_A 110 ----PEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLEL 185 (354)
T ss_dssp ----CCSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTEEEEEEEETTTCCEEEGGGGHHHHHTTCC
T ss_pred ----ccCCCCHHHHHHHHHHHcCCceEEEecccCcHHHHcCCCccCEEEecCCcCccccCCCCCcCCHHHHHHHhhccCC
Confidence 2456788888888899999999999999999999999998999999999999999999998887766666655578
Q ss_pred CCCCCC-----------------------------------CCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcC
Q psy11832 161 PTCEKC-----------------------------------NGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTS 205 (494)
Q Consensus 161 P~C~~C-----------------------------------gg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTS 205 (494)
|+||.| +|.+||+||||||++|...++.+.+++++||++||||||
T Consensus 186 P~Cp~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTS 265 (354)
T 2hjh_A 186 PLCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTS 265 (354)
T ss_dssp CBCTTTHHHHHHHCCC-----------------CCTTSCTTTTBEEEEECCBTSBCCHHHHHHHHHHTTTCCEEEEESCC
T ss_pred CcCccccccccccccccccccccccccccccccccccccccCCeeCCChhhccccCCHHHHHHHHHHHhhCCEEEEECcC
Confidence 888877 489999999999999999999999999999999999999
Q ss_pred CChhhhhhhhhhhhhcCCCceEEEEeccccc
Q psy11832 206 LVVQPFCSLVDKVDVDFPKADLLLIMGTSLV 236 (494)
Q Consensus 206 l~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~ 236 (494)
|+|+|+++|+..+ ..++.+|+||.+|+.
T Consensus 266 L~V~Paa~lv~~~---~~~~~~v~IN~~~t~ 293 (354)
T 2hjh_A 266 LKVAPVSEIVNMV---PSHVPQVLINRDPVK 293 (354)
T ss_dssp CCEETGGGHHHHS---CTTSCEEEEESSCCT
T ss_pred CCchhHHHHHHHH---hcCCcEEEEcCCCCC
Confidence 9999999999887 347889999999986
No 11
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=100.00 E-value=1.6e-50 Score=403.37 Aligned_cols=208 Identities=26% Similarity=0.405 Sum_probs=175.6
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+ +|+|+++. +++++++++|.+||+.||.||....
T Consensus 32 iSt~SGIPdFR~~-~Glw~~~~------~~~l~~~~~f~~~p~~~w~fy~~~~--------------------------- 77 (273)
T 3riy_A 32 VSAESGVPTFRGA-GGYWRKWQ------AQDLATPLAFAHNPSRVWEFYHYRR--------------------------- 77 (273)
T ss_dssp GTGGGTCCCSSSG-GGEETTEE------HHHHSSHHHHHHCHHHHHHHHHHHH---------------------------
T ss_pred cchhhCCCccccc-cchhhhCC------hhhcCCHHHHhhCHHHHHHHHHHHH---------------------------
Confidence 7899999999999 69998763 7889999999999999999875431
Q ss_pred ccccCCCCCChhHHHHHHHHh----cCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHH-----
Q psy11832 81 QVYWGSFKPTPCHYFLKLLHQ----KNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWM----- 151 (494)
Q Consensus 81 ~~~~~~~~Pn~~H~~La~L~~----~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~----- 151 (494)
..+.+++||++|++|++|++ +|++++||||||||||++||+ ++|+|+||++++.+|++|++.|+....
T Consensus 78 -~~~~~~~Pn~~H~~La~Le~~~~~~g~~~~viTQNiDgLh~~AG~--~~vielHG~~~~~~C~~C~~~~~~~~~p~~~~ 154 (273)
T 3riy_A 78 -EVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGT--KNLLEIHGSLFKTRCTSCGVVAENYKSPICPA 154 (273)
T ss_dssp -HHHTTCCCCHHHHHHHHHHHHHHTTTCEEEEEESCCSCHHHHHTC--CSEEETTEEEEEEEETTTCCEEECCCSSSSGG
T ss_pred -HHhhhCCCCHHHHHHHHHHHhhhhcCceeEEEEecccchHhhcCC--CCEEEecCcCCeeEcCCCCCcccccccchhhh
Confidence 01236788888888888884 589999999999999999996 799999999999999999998642210
Q ss_pred -H-----------HHHhhcCCCCC--CCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhh
Q psy11832 152 -K-----------ERIFAEVIPTC--EKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDK 217 (494)
Q Consensus 152 -~-----------~~i~~~~~P~C--~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~ 217 (494)
. ..+....+|+| |.|||.|||+||||||++|+..++.|.+++++||++||||||++|+|+++|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~P~C~~~~Cgg~lrP~VV~FGE~lp~~~~~~a~~~~~~aDl~lviGTSl~V~Paa~l~~~ 234 (273)
T 3riy_A 155 LSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQ 234 (273)
T ss_dssp GTTCCCCSTTCCCCCCCGGGSCBCCGGGCCCBEEEEECCTTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHH
T ss_pred hhcccCCcccccccccccCCCCCCCCCCCCCeeCCcEEEeCCcCCHHHHHHHHHHHhcCCEEEEEeeCCcchhHHHhHHH
Confidence 0 01223458999 789999999999999999999999999999999999999999999999999987
Q ss_pred hhhcCCCceEEEEecccccccccccccccc
Q psy11832 218 VDVDFPKADLLLIMGTSLVVQPFCSLVDKT 247 (494)
Q Consensus 218 ~~~~~~~a~lv~IN~~p~~~h~~a~l~~~~ 247 (494)
+ ..+++++|+||.+|+.....+.+.-.+
T Consensus 235 a--~~~g~~~v~IN~~~t~~d~~~~~~i~g 262 (273)
T 3riy_A 235 V--AARGVPVAEFNTETTPATNRFRFHFQG 262 (273)
T ss_dssp H--HHTTCCEEEEESSCCTTGGGSSEEEES
T ss_pred H--HHCCCEEEEECCCCCCCCcceeEEEeC
Confidence 6 357999999999999987766554333
No 12
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=100.00 E-value=1.2e-49 Score=389.28 Aligned_cols=201 Identities=21% Similarity=0.298 Sum_probs=164.6
Q ss_pred CcccCCCCCccCCCCccccccccCCCCCcchhcchhHHhhChHHHHHHHHHHCCCCCCCChhHHHHHHHhhhhhhhhhhc
Q psy11832 1 MFGAAGIPDFRSPGSGLYDNLEKYKLPHPMAIFELDYFKHRPEAFYTLAKELYPGSFKPTPCHYFLKLLHQKNLLLRHFT 80 (494)
Q Consensus 1 ~~~~SGIPdFRg~~~Glw~~~~~~~~~~~~~~~~~~~f~~~P~~f~~~~~~~~~~~~~Pn~~h~~l~~l~~~~~~~~~~~ 80 (494)
|||+||||||||+ +|+|+++ ++++++++++|.+||+.||.||.....
T Consensus 12 iS~~SGIPdfR~~-~Glw~~~------~~~~~~~~~~f~~~p~~~~~f~~~~~~-------------------------- 58 (235)
T 1s5p_A 12 ISAESGIRTFRAA-DGLWEEH------RVEDVATPEGFDRDPELVQAFYNARRR-------------------------- 58 (235)
T ss_dssp HHHTTTCCCCCSS-SCEETTE------EHHHHSSHHHHHHCHHHHHHHHHHHHH--------------------------
T ss_pred hhhhhCCCCCCCC-CCCccCC------CHhHcccHHHHhhCHHHHHHHHHHHHH--------------------------
Confidence 6899999999999 6999875 389999999999999999998865320
Q ss_pred cccc-CCCCCChhHHHHHHHHh-cCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHhhc
Q psy11832 81 QVYW-GSFKPTPCHYFLKLLHQ-KNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAE 158 (494)
Q Consensus 81 ~~~~-~~~~Pn~~H~~La~L~~-~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~ 158 (494)
.++ .+++||++|++|++|++ .|+.++||||||||||++|| +++|+|+||+++..+|++|++.|+.+. .+...
T Consensus 59 -~~~~~~a~Pn~~H~~La~L~~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~---~~~~~ 132 (235)
T 1s5p_A 59 -QLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG--NTNVIHMHGELLKVRCSQSGQVLDWTG---DVTPE 132 (235)
T ss_dssp -HHTSTTCCCCHHHHHHHHHHHHHGGGEEEEESCCSSHHHHHT--CCSCEETTEEEEEEEETTTCCEEECCS---CCCSS
T ss_pred -HhhhcCCCCCHHHHHHHHHHHhhCCceEEEeccccchhhhcC--CCcEEEecCCceEEEeCCCCCcccchh---hccCC
Confidence 011 35889999999999999 69999999999999999999 589999999999999999999876543 13344
Q ss_pred CCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 159 VIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 159 ~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
.+|+|+.|||.|||+||||||+ |. .++++.+++++||++||||||++|+|+++|+..+ ...++++|+||.+|+...
T Consensus 133 ~~p~c~~Cgg~lrP~vv~FGE~-p~-~~~~a~~~~~~adl~lviGTSl~V~Pa~~l~~~a--~~~g~~~i~iN~~~t~~~ 208 (235)
T 1s5p_A 133 DKCHCCQFPAPLRPHVVWFGEM-PL-GMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEA--KLHGAHTVELNLEPSQVG 208 (235)
T ss_dssp CCC-------CEEEEECCTTSC-CS-SHHHHHHHHHHCSEEEEESCCTTEETGGGHHHHH--HHTTCEEEEEESSSCC--
T ss_pred CCCCCCCCCCeecCcEEEeCCC-HH-HHHHHHHHHhcCCEEEEECcCCchhhHHHHHHHH--HHcCCeEEEEECCCCCCC
Confidence 6899999999999999999999 74 6899999999999999999999999999999988 345899999999999876
Q ss_pred cccccc
Q psy11832 239 PFCSLV 244 (494)
Q Consensus 239 ~~a~l~ 244 (494)
..+.+.
T Consensus 209 ~~~~~~ 214 (235)
T 1s5p_A 209 NEFAEK 214 (235)
T ss_dssp -CCSEE
T ss_pred ccccEE
Confidence 655443
No 13
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=364.93 Aligned_cols=161 Identities=26% Similarity=0.373 Sum_probs=136.0
Q ss_pred CCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh-hcCCCCC
Q psy11832 85 GSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF-AEVIPTC 163 (494)
Q Consensus 85 ~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~-~~~~P~C 163 (494)
.+++||.+|++|++|+++|++++||||||||||++||+++++|+|+|||+++.+|+.|++.|+.+.+..... ....|.|
T Consensus 87 ~~a~Pn~~H~aLa~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~p~~~~C 166 (318)
T 3k35_A 87 ESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLC 166 (318)
T ss_dssp TTCCCCHHHHHHHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSSCEEEEEC
T ss_pred hhCCCCHHHHHHHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhcccCCCCCcC
Confidence 467888888999999999999999999999999999998899999999999999999999876543221110 0112355
Q ss_pred --------CCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832 164 --------EKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL 235 (494)
Q Consensus 164 --------~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~ 235 (494)
+.|||.|||+||||||++|...++.|.+++++||++|||||||+|+|+++|+..+ ...++++|+||.+|+
T Consensus 167 ~~~~~~~c~~CgG~LRPdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL~V~Paa~l~~~a--~~~G~~vviIN~~~t 244 (318)
T 3k35_A 167 TVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLAT--KRRGGRLVIVNLQPT 244 (318)
T ss_dssp CC--------CCCEEEECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCCCSTTGGGHHHHH--HHTTCEEEEECSSCC
T ss_pred cccccccccCcCCeeCCCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCCCchhhhhhHHHH--HhcCCEEEEECCCCC
Confidence 5799999999999999999999999999999999999999999999999999887 467899999999999
Q ss_pred cccccccccccc
Q psy11832 236 VVQPFCSLVDKT 247 (494)
Q Consensus 236 ~~h~~a~l~~~~ 247 (494)
.....+.+.-.+
T Consensus 245 ~~d~~adl~i~g 256 (318)
T 3k35_A 245 KHDRHADLRIHG 256 (318)
T ss_dssp TTGGGCSEEECS
T ss_pred CCCCcccEEEeC
Confidence 887766654433
No 14
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=100.00 E-value=3.3e-44 Score=364.75 Aligned_cols=161 Identities=26% Similarity=0.373 Sum_probs=136.7
Q ss_pred CCCCCChhHHHHHHHHhcCCccEEEeccccchHHhcCCCCCCEEEecCCcCccccCCCCcccchHHHHHHHh-hcCCCCC
Q psy11832 85 GSFKPTPCHYFLKLLHQKNLLLRHFTQNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKERIF-AEVIPTC 163 (494)
Q Consensus 85 ~~~~Pn~~H~~La~L~~~~~~~~iiTQNIDgLh~kAG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~-~~~~P~C 163 (494)
.+++||.+|++|++|+++|++++||||||||||++||+++++|+|+||+++..+|+.|++.|..+.+...+. ....|.|
T Consensus 87 ~~a~Pn~~H~aLa~Le~~g~l~~viTQNIDgLh~rAG~~~~~VieLHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~~~~C 166 (355)
T 3pki_A 87 ESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLC 166 (355)
T ss_dssp TTCCCCHHHHHHHHHHHTTCCSEEEECCCSCHHHHEEEEGGGEEETTCCTTEEEETTTCCEEEBSSCCSCCSSCEEEEEC
T ss_pred hhCCCCHHHHHHHHHHHcCCCcEEEEecccchHhhcCCCcccEEEeCCCCCceeeCCCCCccchHHhhhhcccCCCCCcc
Confidence 467888889999999999999999999999999999998889999999999999999999876543221110 0112345
Q ss_pred --------CCCCCeeeeeEEecCCCCChHHHHHHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccc
Q psy11832 164 --------EKCNGLVKPDIVFFGENLPSRYFHRVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSL 235 (494)
Q Consensus 164 --------~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~ 235 (494)
+.|||.|||+||||||++|...++.|.+++++||++|||||||+|+|+++|+..+ ...++++|+||.+|+
T Consensus 167 ~~~~~~~~~~CgG~LRPdVV~FGE~lP~~~~~~A~~~~~~aDllLViGTSL~V~Paa~Lp~~a--~~~G~~vviIN~~pT 244 (355)
T 3pki_A 167 TVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLAT--KRRGGRLVIVNLQPT 244 (355)
T ss_dssp CCCCBTTBCCCCCEEEECCCCTTSCCCHHHHHHHHHHHHHCSEEEEESCCCCSTTGGGTTHHH--HHTTCEEEEECSSCC
T ss_pred ccccccccccCCCccCCCEEECCCcCCHHHHHHHHHHHhcCCEEEEEeeCCCchhhhhhHHHH--HhcCCEEEEECCCCC
Confidence 5899999999999999999999999999999999999999999999999999887 457889999999999
Q ss_pred cccccccccccc
Q psy11832 236 VVQPFCSLVDKT 247 (494)
Q Consensus 236 ~~h~~a~l~~~~ 247 (494)
.....+.+.-.+
T Consensus 245 ~~d~~adl~i~g 256 (355)
T 3pki_A 245 KHDRHADLRIHG 256 (355)
T ss_dssp TTGGGCSEEECS
T ss_pred CCCCccCEEEeC
Confidence 877666554333
No 15
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=100.00 E-value=2.4e-36 Score=301.60 Aligned_cols=183 Identities=26% Similarity=0.345 Sum_probs=149.5
Q ss_pred ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832 231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG 309 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c 309 (494)
+.+|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.++++..+... .+|.|
T Consensus 89 ~a~Pn~~H~~La~Le~~g~l~~viTQNIDgLh~rAG~~~~~VielHGs~~~~~C~~C~~~~~~~~~~~~i~~~--~~P~C 166 (285)
T 3glr_A 89 NYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMAD--RVPRC 166 (285)
T ss_dssp SCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEEEGGGGHHHHHTT--CCCBC
T ss_pred cCCCCHHHHHHHHHHHcCCCceEEeeeecchHhhcCCCcccEEEecCCCCeEEECCCCCcCCHHHHHHHhhcC--CCCCC
Confidence 45788888765 6888899999999999999999999999999999999999999999999998887766543 35889
Q ss_pred CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCCCCCCCcccEEEeCC
Q psy11832 310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLEGD 387 (494)
Q Consensus 310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~ 387 (494)
+.|+| ++||+||| |++|..+. .+.+++++||++|||||||+| +|+++|+.... ....-
T Consensus 167 ~~Cgg---~lrP~IV~FGE~lp~~~~-~~~~~~~~aDlllviGTSl~V---~Paa~l~~~~~-------~~~~~------ 226 (285)
T 3glr_A 167 PVCTG---VVKPDIVFFGEPLPQRFL-LHVVDFPMADLLLILGTSLEV---EPFASLTEAVR-------SSVPR------ 226 (285)
T ss_dssp TTTCC---BEEEEECCTTSBCCGGGG-GHHHHHHHCSEEEEESCCCCE---ETTGGGGGSSC-------TTSCE------
T ss_pred CCCCC---ccCCcEEEeCCcCCHHHH-HHHHHHhcCCEEEEeCCCCcc---ccHHHHHHHHh-------CCCcE------
Confidence 99998 58899988 56777666 446677899999999999999 99999985321 01111
Q ss_pred hhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhhc
Q psy11832 388 CDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLG 454 (494)
Q Consensus 388 ~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~~ 454 (494)
.++|+++...|...++.+|++++||||+++.+|+++|||++||++|+.
T Consensus 227 -------------------v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~lgw~~el~~~~~ 274 (285)
T 3glr_A 227 -------------------LLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELLGWTEEMRDLVQ 274 (285)
T ss_dssp -------------------EEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred -------------------EEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHhCCHHHHHHHHH
Confidence 134555544444345779999999999999999999999999999985
No 16
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=100.00 E-value=1.8e-34 Score=293.66 Aligned_cols=195 Identities=32% Similarity=0.506 Sum_probs=148.3
Q ss_pred ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCC--CCCccchHHHHhhhccCCCCCC
Q psy11832 231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLT--CRKDYSVAWMKEGNLLGRMGIT 307 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~--C~~~y~~~~~~~~i~~~~~~~p 307 (494)
+.+|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++ |++.|+.+++.+.+... ..|
T Consensus 109 ~a~Pn~~H~aLa~L~~~g~~~~viTQNIDgLh~~AG~~~~~VielHGs~~~~~C~~~~C~~~~~~~~~~~~i~~~--~~P 186 (323)
T 1j8f_A 109 QFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE--VTP 186 (323)
T ss_dssp SCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEESCTTTCCEECHHHHHHHHHTT--CCC
T ss_pred cCCCCHHHHHHHHHHhcCCCcEEEeecccchHHHcCCCcccEEEeeCCcceeecCCCccCccccHHHHHHhhccC--CCC
Confidence 45777777655 67888999999999999999999999999999999999999999 99999999887766544 358
Q ss_pred ccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCCCCCCCcccEEEe
Q psy11832 308 LGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGFDNENNVRDVFLE 385 (494)
Q Consensus 308 ~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~ 385 (494)
.|+.|+| ++||+||| |++|..++..+.+.+++||++||+||||+| +|++.++..+.. ...-+
T Consensus 187 ~C~~Cgg---~lrP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V---~P~a~l~~~~~~-------~~~~v--- 250 (323)
T 1j8f_A 187 KCEDCQS---LVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQV---QPFASLISKAPL-------STPRL--- 250 (323)
T ss_dssp BCTTTCC---BEEEEECCBTSCCCHHHHHHHHHGGGSCSEEEEESSCSCS---HHHHHHHTTSCT-------TCCEE---
T ss_pred CCcCCCC---ccCCCEEecCCcCCHHHHHHHHHHHhCCCEEEEEeeCccc---HHHHHHHHHHHc-------CCcEE---
Confidence 8999998 58888888 667888888888888999999999999999 999999854310 01111
Q ss_pred CChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhhcccCCCCCcccc
Q psy11832 386 GDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNEN 465 (494)
Q Consensus 386 g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~~~~~~~~~~~~~ 465 (494)
++|.++... .+ .+. .-++..+++++|+..+
T Consensus 251 ----------------------~IN~~~t~~-------~~--------~~~-------------~~~~~~~~~~~~~~~~ 280 (323)
T 1j8f_A 251 ----------------------LINKEKAGQ-------SD--------PFL-------------GMIMGLGGGMDFDSKK 280 (323)
T ss_dssp ----------------------EEESSCCCC-------CC--------HHH-------------HHHHHHHTCCCSSSTT
T ss_pred ----------------------EEeCCCCCC-------Cc--------ccc-------------cccccccccccccccc
Confidence 223222111 00 000 1123456677888777
Q ss_pred ccccceeccccchhHHHHHHHhccCccc
Q psy11832 466 NVRDVFLEGDCDSGCQKLADMLGWGKDI 493 (494)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (494)
+.+|+.+.|||+.+..+|++.|||..|+
T Consensus 281 ~~~d~~i~gd~~~~l~~L~~~lgw~~~l 308 (323)
T 1j8f_A 281 AYRDVAWLGECDQGCLALAELLGWKKEL 308 (323)
T ss_dssp CCSEEEEESCHHHHHHHHHHHTTCHHHH
T ss_pred cceeEEEeCCHHHHHHHHHHHcCCchHH
Confidence 7888888888888888888888887664
No 17
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-32 Score=282.88 Aligned_cols=182 Identities=24% Similarity=0.254 Sum_probs=142.8
Q ss_pred eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832 231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG 309 (494)
Q Consensus 231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c 309 (494)
+..|+..|.. +.|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+.+.+... .+|.|
T Consensus 111 ~~~Pn~~H~aLa~Le~~g~l~~viTQNVDgLh~rAG~~~~~vielHGsl~~~~C~~C~~~~~~~~~~~~~~~~--~~P~C 188 (354)
T 2hjh_A 111 EKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNL--ELPLC 188 (354)
T ss_dssp CSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTEEEEEEEETTTCCEEEGGGGHHHHHTT--CCCBC
T ss_pred cCCCCHHHHHHHHHHHcCCceEEEecccCcHHHHcCCCccCEEEecCCcCccccCCCCCcCCHHHHHHHhhcc--CCCcC
Confidence 3467777755 47888899999999999999999999999999999999999999999999988877665332 35777
Q ss_pred CCCC--------------------------------CCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEecccccc
Q psy11832 310 LHAG--------------------------------GLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGV 355 (494)
Q Consensus 310 ~~C~--------------------------------g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V 355 (494)
+.|+ .|.+++||+||| |++|..++..+.+.+.+||++|||||||+|
T Consensus 189 p~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTSL~V 268 (354)
T 2hjh_A 189 PYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKV 268 (354)
T ss_dssp TTTHHHHHHHCCC-----------------CCTTSCTTTTBEEEEECCBTSBCCHHHHHHHHHHTTTCCEEEEESCCCCE
T ss_pred ccccccccccccccccccccccccccccccccccccccCCeeCCChhhccccCCHHHHHHHHHHHhhCCEEEEECcCCCc
Confidence 7774 123578999998 567878888888999999999999999999
Q ss_pred CCCCcchhhhcccCCCCCCCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHH
Q psy11832 356 GSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSG 435 (494)
Q Consensus 356 ~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~ 435 (494)
+|++.++..+. .. +.+ .++|.++... ...|+.+.||||++
T Consensus 269 ---~Paa~lv~~~~-------~~-~~~------------------------v~IN~~~t~~-----~~~dl~i~g~~~~v 308 (354)
T 2hjh_A 269 ---APVSEIVNMVP-------SH-VPQ------------------------VLINRDPVKH-----AEFDLSLLGYCDDI 308 (354)
T ss_dssp ---ETGGGHHHHSC-------TT-SCE------------------------EEEESSCCTT-----SCCSEEEESCHHHH
T ss_pred ---hhHHHHHHHHh-------cC-CcE------------------------EEEcCCCCCC-----CCcCEEEeCCHHHH
Confidence 99998875331 00 111 2345544321 23899999999999
Q ss_pred HHHHHHHcCCch---hhhhhhc
Q psy11832 436 CQKLADMLGWGI---PLMGLLG 454 (494)
Q Consensus 436 ~~~l~~~lgW~~---el~~l~~ 454 (494)
+.+|++.|||+. ++++|..
T Consensus 309 l~~L~~~lgw~~p~~~~~~~~~ 330 (354)
T 2hjh_A 309 AAMVAQKCGWTIPHKKWNDLKN 330 (354)
T ss_dssp HHHHHHHHTCCCCSTTHHHHHT
T ss_pred HHHHHHHcCCCCchHHHHHhhc
Confidence 999999999995 4455543
No 18
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.7e-32 Score=282.37 Aligned_cols=178 Identities=25% Similarity=0.285 Sum_probs=142.2
Q ss_pred ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832 231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG 309 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c 309 (494)
+..|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|+++|+.+++.+.+.... +|.|
T Consensus 249 ~~~Pn~aH~aLa~Le~~G~l~~VITQNIDgLHqrAG~~s~~ViELHGsl~~~~C~~Cg~~~~~e~i~~~i~~~~--~P~C 326 (492)
T 4iao_A 249 EKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLE--LPLC 326 (492)
T ss_dssp SSCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCTTTEEETTCCTTEEEETTTCCEEEGGGGHHHHHTTC--CCBC
T ss_pred cCCCCHHHHHHHHHHHCCCCceeEeccccchHhhcCCChhhEEeecCccceeecCCCCCcCCHHHHHHHHhccC--CCCC
Confidence 35677777765 68889999999999999999999999999999999999999999999999888776654433 4667
Q ss_pred CCCC--------------------------------CCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEecccccc
Q psy11832 310 LHAG--------------------------------GLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGV 355 (494)
Q Consensus 310 ~~C~--------------------------------g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V 355 (494)
+.|+ .|.+++||+||| |++|..++..+.+++++||+||||||||+|
T Consensus 327 p~Cg~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~c~~cgG~LRPdIVfFGE~LP~~~~~~a~~~~~~aDLlLVIGTSL~V 406 (492)
T 4iao_A 327 PYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKV 406 (492)
T ss_dssp TTTHHHHHHHSTTCCCCC--------CCTTCCTTCCTTTTBEEESSCCBTSBCCHHHHHHHHHHTTTCSEEEEESCCCCE
T ss_pred cccccccccccccccccccccccccccccccccccccCCCcCCCCEEECCCCCCHHHHHHHHHHHhhCCEEEEeccCCCc
Confidence 7774 233578898888 677888888888999999999999999999
Q ss_pred CCCCcchhhhcccCCCCCCCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHH
Q psy11832 356 GSRNPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSG 435 (494)
Q Consensus 356 ~~~~P~a~l~~~~~g~~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~ 435 (494)
+|+++|+..+.+ ... ..++|+++... ...|+.++|+||++
T Consensus 407 ---yPaA~Lv~~a~~-------~~p-------------------------~ViIN~ept~~-----~~~Dl~l~G~cdev 446 (492)
T 4iao_A 407 ---APVSEIVNMVPS-------HVP-------------------------QVLINRDPVKH-----AEFDLSLLGYCDDI 446 (492)
T ss_dssp ---ETGGGHHHHSBT-------TSC-------------------------EEEEESSCCTT-----SCCSEEEESCHHHH
T ss_pred ---cchhhHHHHHhc-------CCc-------------------------EEEEcCCCCCC-----CCccEEEeCCHHHH
Confidence 999998754310 001 12455554332 23799999999999
Q ss_pred HHHHHHHcCCchhhh
Q psy11832 436 CQKLADMLGWGIPLM 450 (494)
Q Consensus 436 ~~~l~~~lgW~~el~ 450 (494)
+.+||++|||+..-+
T Consensus 447 v~~L~~~LGw~ip~~ 461 (492)
T 4iao_A 447 AAMVAQKCGWTIPHK 461 (492)
T ss_dssp HHHHHHHTTCCCCST
T ss_pred HHHHHHHhCCCCChH
Confidence 999999999996433
No 19
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=99.97 E-value=6e-32 Score=272.57 Aligned_cols=166 Identities=20% Similarity=0.177 Sum_probs=132.0
Q ss_pred cccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc-
Q psy11832 232 GTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG- 309 (494)
Q Consensus 232 ~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c- 309 (494)
.+|+..|... +|+++|++.+||||||||||++||.++++|+|+|||+++.+|++|++.|+.+.+...+.. ....+.|
T Consensus 89 a~Pn~~H~aLa~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~-~p~~~~C~ 167 (318)
T 3k35_A 89 ARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGL-KATGRLCT 167 (318)
T ss_dssp CCCCHHHHHHHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSS-CEEEEECC
T ss_pred CCCCHHHHHHHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhccc-CCCCCcCc
Confidence 4677777654 788889999999999999999999888999999999999999999999987654322110 0001234
Q ss_pred -------CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------
Q psy11832 310 -------LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL------- 371 (494)
Q Consensus 310 -------~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~------- 371 (494)
+.|+| ++||+||| |++|..++..+.+.+++||++||+||||+| +|+++|+..+ .|.
T Consensus 168 ~~~~~~c~~CgG---~LRPdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL~V---~Paa~l~~~a~~~G~~vviIN~ 241 (318)
T 3k35_A 168 VAKARGLRACRG---ELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQI---RPSGNLPLATKRRGGRLVIVNL 241 (318)
T ss_dssp C--------CCC---EEEECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCCCS---TTGGGHHHHHHHTTCEEEEECS
T ss_pred ccccccccCcCC---eeCCCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCCCc---hhhhhhHHHHHhcCCEEEEECC
Confidence 45666 68888887 678888889999999999999999999999 9999997543 233
Q ss_pred CCCCCCCcccEEEeCChhHHHHHHHHHhCCCch
Q psy11832 372 GFDNENNVRDVFLEGDCDSGCQKLADMLGWGIP 404 (494)
Q Consensus 372 ~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~ 404 (494)
+.+..++.+|++|+|++++++++|++.|||.-+
T Consensus 242 ~~t~~d~~adl~i~g~~~evl~~L~~~Lg~~iP 274 (318)
T 3k35_A 242 QPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIP 274 (318)
T ss_dssp SCCTTGGGCSEEECSCHHHHHHHHHHHHTCCCC
T ss_pred CCCCCCCcccEEEeCCHHHHHHHHHHHhCCCCC
Confidence 345556789999999999999999999998644
No 20
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=99.97 E-value=1.3e-31 Score=263.36 Aligned_cols=161 Identities=18% Similarity=0.205 Sum_probs=134.6
Q ss_pred ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832 231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG 309 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c 309 (494)
+.+|+..|... +|+++|++.+||||||||||++|| +++|+|+|||+++.+|+.|++.|+.+++.+.+..+ ..|.|
T Consensus 73 ~~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~--~~p~C 148 (246)
T 1yc5_A 73 QAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG--SKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESS--DVPLC 148 (246)
T ss_dssp GCCCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTT--CSCEEETTEEEEEEEETTTCCEEEHHHHHHHTTTC--SSCBC
T ss_pred cCCCCHHHHHHHHHHhcCCCceEEeccccchHhHcC--CCcEEEecCccceeEcCCCCCCCcHHHHHHHhccC--CCCCC
Confidence 45777887655 688889999999999999999999 69999999999999999999999998877654322 46889
Q ss_pred CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC--CC-------CCCCCCC
Q psy11832 310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE--GL-------GFDNENN 378 (494)
Q Consensus 310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~--g~-------~~~~~~~ 378 (494)
+.|+| ++||+||| |++|...+..+.+.+++||++||+||||+| +|++.++..+. |. +.+..+.
T Consensus 149 ~~Cgg---~lrP~vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V---~P~~~l~~~a~~~g~~~i~IN~~~~~~d~ 222 (246)
T 1yc5_A 149 DDCNS---LIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVV---YPAAELPLITVRSGGKLVIVNLGETPFDD 222 (246)
T ss_dssp TTTCC---BEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHHHHHHHTCEEEEECSSCCTTGG
T ss_pred CCCCC---ccCcceEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCcc---hhHHHHHHHHHHcCCeEEEEeCCCCCCCc
Confidence 99998 57888888 667887888888888899999999999999 99998865442 33 2333456
Q ss_pred cccEEEeCChhHHHHHHHHHhCC
Q psy11832 379 VRDVFLEGDCDSGCQKLADMLGW 401 (494)
Q Consensus 379 ~~dl~i~g~~~~~~~~L~~~lg~ 401 (494)
.+|+.|.|++++++++|++.||+
T Consensus 223 ~~~~~i~~~~~~~l~~l~~~lg~ 245 (246)
T 1yc5_A 223 IATLKYNMDVVEFARRVMEEGGI 245 (246)
T ss_dssp GCSEEECSCHHHHHHHHHHHHTC
T ss_pred ceeEEEeCCHHHHHHHHHHHcCC
Confidence 78999999999999999999984
No 21
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=99.96 E-value=1.1e-31 Score=272.94 Aligned_cols=166 Identities=20% Similarity=0.181 Sum_probs=132.6
Q ss_pred cccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc-
Q psy11832 232 GTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG- 309 (494)
Q Consensus 232 ~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c- 309 (494)
.+|+..|... +|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+...+.. ....+.|
T Consensus 89 a~Pn~~H~aLa~Le~~g~l~~viTQNIDgLh~rAG~~~~~VieLHGsl~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~C~ 167 (355)
T 3pki_A 89 ARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGL-KATGRLCT 167 (355)
T ss_dssp CCCCHHHHHHHHHHHTTCCSEEEECCCSCHHHHEEEEGGGEEETTCCTTEEEETTTCCEEEBSSCCSCCSS-CEEEEECC
T ss_pred CCCCHHHHHHHHHHHcCCCcEEEEecccchHhhcCCCcccEEEeCCCCCceeeCCCCCccchHHhhhhccc-CCCCCccc
Confidence 4677777654 788889999999999999999999888899999999999999999999987654332110 0001223
Q ss_pred -------CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------
Q psy11832 310 -------LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL------- 371 (494)
Q Consensus 310 -------~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~------- 371 (494)
+.|+| ++||+||| |++|..++..+.+.+++||+||||||||+| +|+++|+..+ .|.
T Consensus 168 ~~~~~~~~~CgG---~LRPdVV~FGE~lP~~~~~~A~~~~~~aDllLViGTSL~V---~Paa~Lp~~a~~~G~~vviIN~ 241 (355)
T 3pki_A 168 VAKARGLRACRG---ELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQI---RPSGNLPLATKRRGGRLVIVNL 241 (355)
T ss_dssp CCCBTTBCCCCC---EEEECCCCTTSCCCHHHHHHHHHHHHHCSEEEEESCCCCS---TTGGGTTHHHHHTTCEEEEECS
T ss_pred cccccccccCCC---ccCCCEEECCCcCCHHHHHHHHHHHhcCCEEEEEeeCCCc---hhhhhhHHHHHhcCCEEEEECC
Confidence 45666 68888887 678888888888889999999999999999 9999997553 233
Q ss_pred CCCCCCCcccEEEeCChhHHHHHHHHHhCCCch
Q psy11832 372 GFDNENNVRDVFLEGDCDSGCQKLADMLGWGIP 404 (494)
Q Consensus 372 ~~~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~ 404 (494)
+.+..+..+|++|.|++++++++|++.|||.-+
T Consensus 242 ~pT~~d~~adl~i~g~a~evl~~L~~~Lg~~iP 274 (355)
T 3pki_A 242 QPTKHDRHADLRIHGYVDEVMTRLMEHLGLEIP 274 (355)
T ss_dssp SCCTTGGGCSEEECSCHHHHHHHHHHHTTCCCC
T ss_pred CCCCCCCccCEEEeCCHHHHHHHHHHHhCCCCC
Confidence 344556789999999999999999999998643
No 22
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=99.96 E-value=1.8e-30 Score=256.15 Aligned_cols=158 Identities=20% Similarity=0.244 Sum_probs=130.4
Q ss_pred cccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCccC
Q psy11832 232 GTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGL 310 (494)
Q Consensus 232 ~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~ 310 (494)
.+|+..|... +|+++|++.+||||||||||++|| +++|+|+|||+++.+|+.|++.|+.+++.+.+... ..|.|+
T Consensus 76 ~~Pn~~H~~La~L~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~--~~p~C~ 151 (253)
T 1ma3_A 76 AEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAG--SRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKG--EIPRCR 151 (253)
T ss_dssp CCCCHHHHHHHHHHHTTSEEEEEESCCSCHHHHHT--CCSEEETTEEEEEEEETTTCCEEEGGGTHHHHHTT--CCCCCT
T ss_pred CCCCHHHHHHHHHHhcCCCeEEEeccccccHhHhC--CCCEEEeCCCcCeeeeCCCCCcCcHHHHHHHhccC--CCCCCC
Confidence 4677777655 688889999999999999999999 69999999999999999999999988776554332 358899
Q ss_pred CCCC-CCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC--CC-------CCCCCCC
Q psy11832 311 HAGG-LSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE--GL-------GFDNENN 378 (494)
Q Consensus 311 ~C~g-~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~--g~-------~~~~~~~ 378 (494)
.|+| . +||+||| |++|...+..+.+.+++||++||+||||+| +|++.|+..+. |. +.+..+.
T Consensus 152 ~Cgg~~---lrP~Vv~FgE~lp~~~~~~a~~~~~~adl~lviGTSl~V---~P~~~l~~~a~~~g~~~i~iN~~~~~~d~ 225 (253)
T 1ma3_A 152 KCGSYY---VKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVV---YPAAELPYIAKKAGAKMIIVNAEPTMADP 225 (253)
T ss_dssp TTCCSC---EEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHHHHHHHTCEEEEEESSCCTTGG
T ss_pred CCCCcc---ccceEEEeCCCCCHHHHHHHHHHHHhCCEEEEECCCcee---ccHHHHHHHHHHcCCeEEEEeCCCCCCCC
Confidence 9988 5 6788887 667887888888888899999999999999 99998865432 33 2333456
Q ss_pred cccEEEeCChhHHHHHHHHHh
Q psy11832 379 VRDVFLEGDCDSGCQKLADML 399 (494)
Q Consensus 379 ~~dl~i~g~~~~~~~~L~~~l 399 (494)
.+|+.|.|++++++++|++.+
T Consensus 226 ~~~~~i~~~~~~~l~~l~~~l 246 (253)
T 1ma3_A 226 IFDVKIIGKAGEVLPKIVEEV 246 (253)
T ss_dssp GCSEEEESCHHHHHHHHHHHH
T ss_pred ceeEEEeCCHHHHHHHHHHHH
Confidence 789999999999999998765
No 23
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=99.96 E-value=3.1e-30 Score=253.92 Aligned_cols=157 Identities=15% Similarity=0.178 Sum_probs=128.4
Q ss_pred ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832 231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG 309 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c 309 (494)
+.+|+..|... +|+++|++.+||||||||||++|| +++|+|+|||+++.+|+.|++.|+.++. +.. ...|.|
T Consensus 73 ~~~Pn~~H~~La~L~~~g~~~~viTQNiDgLh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~~---~~~--~~~p~C 145 (249)
T 1m2k_A 73 NAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAG--SRNVIHLHGSLRVVRCTSCNNSFEVESA---PKI--PPLPKC 145 (249)
T ss_dssp HCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTT--CCSEEETTEEEEEEEESSSSCEEECSSC---CCS--SSCCBC
T ss_pred cCCCCHHHHHHHHHHhCCCCcEEEECCccchhhhcC--CCcEEEecCCcceeEeCCCCCcccchhh---ccC--CCCCCC
Confidence 45677777654 688889999999999999999999 7999999999999999999999877653 211 135889
Q ss_pred CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCCCCC
Q psy11832 310 LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDNENN 378 (494)
Q Consensus 310 ~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~~~~ 378 (494)
+.|+| ++||+||| |++|...+..+.+.+++||++||+||||+| +|++.|+..+ .|. +.+..+.
T Consensus 146 ~~Cgg---~lrP~Vv~FgE~lp~~~~~~a~~~~~~adlllviGTSl~V---~P~~~l~~~a~~~g~~~i~IN~~~~~~d~ 219 (249)
T 1m2k_A 146 DKCGS---LLRPGVVWAGEMLPPDVLDRAMREVERADVIIVAGTSAVV---QPAASLPLIVKQRGGAIIEINPDETPLTP 219 (249)
T ss_dssp SSSSS---BEEEEECCTTSCCCHHHHHHHHHHHHHCSEEEEESCCSCS---TTGGGHHHHHHHTTCEEEEECSSCCTTGG
T ss_pred CCCCC---CcCCeEEecCCCCCHHHHHHHHHHHhcCCEEEEEccCCCc---cchHHHHHHHHHcCCeEEEEeCCCCCCCc
Confidence 99998 58888888 677888888888888899999999999999 9999886543 233 2333356
Q ss_pred cccEEEeCChhHHHHHHHHHhC
Q psy11832 379 VRDVFLEGDCDSGCQKLADMLG 400 (494)
Q Consensus 379 ~~dl~i~g~~~~~~~~L~~~lg 400 (494)
.+|+.|.|++++++++|++.+.
T Consensus 220 ~~~~~i~~~~~~~l~~l~~~l~ 241 (249)
T 1m2k_A 220 IADYSLRGKAGEVMDELVRHVR 241 (249)
T ss_dssp GCSEEECSCHHHHHHHHHHHHH
T ss_pred ceeEEEeCCHHHHHHHHHHHHH
Confidence 7899999999999999987653
No 24
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=99.96 E-value=7.4e-30 Score=256.36 Aligned_cols=186 Identities=24% Similarity=0.297 Sum_probs=141.5
Q ss_pred ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccC-CCCCCc
Q psy11832 231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLG-RMGITL 308 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~-~~~~p~ 308 (494)
+.+|+..|... +|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+...+... ...+|.
T Consensus 86 ~a~Pn~~H~~La~L~~~g~~~~viTQNVDgLh~~AG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~ 165 (289)
T 1q1a_A 86 NFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVK 165 (289)
T ss_dssp SCCCCHHHHHHHHHHHTTCEEEEEECCSSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECHHHHHHHHTCSSCCSCCB
T ss_pred cCCCCHHHHHHHHHHhCCCccEEEecCccchHHHcCCCcccEEEecCCcCceEECCCCCCCcHHHHHHHHhhccCCCCcc
Confidence 45677777665 6788899999999999999999999889999999999999999999999998877665432 124588
Q ss_pred cCCCCCCCCCCCCcEEe--ccCChhHHHhh-------------hcCCCCCCeEEEeccccccCCCCcchhhhcccCCCCC
Q psy11832 309 GLHAGGLSSIPGGAEVF--SALCLEFGVHS-------------ASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGF 373 (494)
Q Consensus 309 c~~C~g~~~i~~p~ivf--e~l~~~~~~~~-------------~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~ 373 (494)
|+.|+| ++||+||| |++|..+...+ .+...+||++||+|||++| +|++.|+..+.
T Consensus 166 C~~Cgg---~lrP~vv~FGE~lp~~~~~~~~~~~~~l~~~~~a~~~~~~~DlllviGTSl~V---~Pa~~l~~~~~---- 235 (289)
T 1q1a_A 166 CDVCGE---LVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAV---YPFASLPEEIP---- 235 (289)
T ss_dssp CTTTCC---BEEEEECCBTSBCCHHHHHHHHHHHHHHHHHHHC----CCCCEEEEESCCCCE---ETTTHHHHHSC----
T ss_pred CCCCCC---EECCCEEEcCCCCCHHHHHHHHHhhhhhhhhhhHHHHhccCCEEEEEccCCCh---hhHHHHHHHHh----
Confidence 999998 57888888 56676654433 3568899999999999999 89998875431
Q ss_pred CCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhh
Q psy11832 374 DNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLL 453 (494)
Q Consensus 374 ~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~ 453 (494)
..+.++ ++|.++...|.......|+.+.|||++++.+|++.|||++||++|+
T Consensus 236 ----~~~~~v------------------------~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l~~~~~~~~~~ 287 (289)
T 1q1a_A 236 ----RKVKRV------------------------LCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKIL 287 (289)
T ss_dssp ----TTSEEE------------------------EESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ----cCCCEE------------------------EEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHHcCCHHHHHHHh
Confidence 011111 2344332212112345899999999999999999999999999987
Q ss_pred c
Q psy11832 454 G 454 (494)
Q Consensus 454 ~ 454 (494)
.
T Consensus 288 ~ 288 (289)
T 1q1a_A 288 T 288 (289)
T ss_dssp T
T ss_pred h
Confidence 4
No 25
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=99.95 E-value=5.1e-30 Score=250.29 Aligned_cols=155 Identities=14% Similarity=-0.007 Sum_probs=117.6
Q ss_pred cccccccccc-cccc-cccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCcc
Q psy11832 232 GTSLVVQPFC-SLVD-KTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLG 309 (494)
Q Consensus 232 ~~p~~~h~~a-~l~~-~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c 309 (494)
.+|+..|... +|++ +|++.+||||||||||++|| +++|+|+|||+++.+|++|++.|+.+. .+. ..+.|.|
T Consensus 65 a~Pn~~H~~La~L~~~~g~~~~viTQNvD~Lh~~AG--~~~v~elHG~~~~~~C~~C~~~~~~~~---~~~--~~~~p~c 137 (235)
T 1s5p_A 65 IQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG--NTNVIHMHGELLKVRCSQSGQVLDWTG---DVT--PEDKCHC 137 (235)
T ss_dssp CCCCHHHHHHHHHHHHHGGGEEEEESCCSSHHHHHT--CCSCEETTEEEEEEEETTTCCEEECCS---CCC--SSCCC--
T ss_pred CCCCHHHHHHHHHHHhhCCceEEEeccccchhhhcC--CCcEEEecCCceEEEeCCCCCcccchh---hcc--CCCCCCC
Confidence 5677777655 6887 59999999999999999999 899999999999999999999988654 122 2346788
Q ss_pred CCCCCCCCCCCCcEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhcccC--CC-------CCCCCCCcc
Q psy11832 310 LHAGGLSSIPGGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLSE--GL-------GFDNENNVR 380 (494)
Q Consensus 310 ~~C~g~~~i~~p~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~--g~-------~~~~~~~~~ 380 (494)
+.|+| ++||+||||++....+..+.+.+++||++||+|||++| +|++.|+..+. |. +.+..+..+
T Consensus 138 ~~Cgg---~lrP~vv~FGE~p~~~~~a~~~~~~adl~lviGTSl~V---~Pa~~l~~~a~~~g~~~i~iN~~~t~~~~~~ 211 (235)
T 1s5p_A 138 CQFPA---PLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHV---YPAAGFVHEAKLHGAHTVELNLEPSQVGNEF 211 (235)
T ss_dssp --------CEEEEECCTTSCCSSHHHHHHHHHHCSEEEEESCCTTE---ETGGGHHHHHHHTTCEEEEEESSSCC---CC
T ss_pred CCCCC---eecCcEEEeCCCHHHHHHHHHHHhcCCEEEEECcCCch---hhHHHHHHHHHHcCCeEEEEECCCCCCCccc
Confidence 88988 58899999554334567777888899999999999999 99999876642 33 234445678
Q ss_pred cEEEeCChhHHHHHHHHHh
Q psy11832 381 DVFLEGDCDSGCQKLADML 399 (494)
Q Consensus 381 dl~i~g~~~~~~~~L~~~l 399 (494)
|+.|.|++++++++|++.+
T Consensus 212 ~~~i~~~~~~~l~~l~~~l 230 (235)
T 1s5p_A 212 AEKYYGPASQVVPEFVEKL 230 (235)
T ss_dssp SEEEESCHHHHHHHHHHHH
T ss_pred cEEEeCCHHHHHHHHHHHH
Confidence 9999999999999998765
No 26
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=99.95 E-value=2.6e-29 Score=258.65 Aligned_cols=189 Identities=24% Similarity=0.289 Sum_probs=143.5
Q ss_pred ecccccccccc-cccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHhhhccCC-CCCCc
Q psy11832 231 MGTSLVVQPFC-SLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGR-MGITL 308 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~-~~~p~ 308 (494)
+..|+..|... .|+++|++.+||||||||||++||+++++|+|+|||+++.+|++|++.|+.+.+...+.... ..+|.
T Consensus 94 ~a~Pn~~H~aLa~Le~~g~~~~ViTQNVDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~ 173 (361)
T 1q14_A 94 NFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVK 173 (361)
T ss_dssp CCCCCHHHHHHHHHHHTTCEEEEEECCCSCHHHHTTCCGGGEEETTEEEEEEEETTTCCEECTHHHHHHTTSSSCSCCCB
T ss_pred cCCCCHHHHHHHHHHhcCCCcEEEecccchhHhHcCCCcceEEeccccccccCcCCCCccCcHHHHHHHHhhcccCCCCC
Confidence 56788887665 67788999999999999999999998899999999999999999999999988776654321 23588
Q ss_pred cCCCCCCCCCCCCcEEe--ccCChhHHHhhhc-------------CCCCCCeEEEeccccccCCCCcchhhhcccCCCCC
Q psy11832 309 GLHAGGLSSIPGGAEVF--SALCLEFGVHSAS-------------APPHCPRLLINKEKVGVGSRNPLMGLLGLSEGLGF 373 (494)
Q Consensus 309 c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~-------------~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~~g~~~ 373 (494)
||.|+| ++||+||| |++|...+..+.+ ...+||++||+|||++| +|++.|+..+.
T Consensus 174 Cp~Cgg---~lrP~VV~FGE~lp~~~~~~~~~a~~~l~~~i~~~~~~~~aDllLviGTSl~V---~Paa~l~~~~~---- 243 (361)
T 1q14_A 174 CDVCGE---LVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAV---YPFASLPEEIP---- 243 (361)
T ss_dssp CTTTCC---BEEEEECCBTSCCCHHHHHHHHHHHHHHHHC--------CCCEEEEESCCCCS---TTGGGHHHHSC----
T ss_pred CcCCCC---EeCCCcccccccCCHHHHHHHHHHHHhhhhcchhhhhhccCCEEEEECCCCCc---hhHHHHHHHHh----
Confidence 999998 57888888 5677766554443 67899999999999999 99998875431
Q ss_pred CCCCCcccEEEeCChhHHHHHHHHHhCCCchHHHhhcCccccCCCCCCCccceEEeCCcHHHHHHHHHHcCCchhhhhhh
Q psy11832 374 DNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLLGLSEGLGFDNENNVRDVFLEGDCDSGCQKLADMLGWGIPLMGLL 453 (494)
Q Consensus 374 ~~~~~~~dl~i~g~~~~~~~~L~~~lg~~~~~~~l~~~~~~~~f~~~~~~~Dv~~lgdcD~~~~~l~~~lgW~~el~~l~ 453 (494)
..+.++ ++|.++...|.......|+.+.|||++++.+|++.|||++||++|+
T Consensus 244 ----~g~~~v------------------------~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~Lg~~~~l~~~~ 295 (361)
T 1q14_A 244 ----RKVKRV------------------------LCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKIL 295 (361)
T ss_dssp ----TTSEEE------------------------EESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ----cCCeEE------------------------EEeCCCccccccCcccccEEEeCCHHHHHHHHHHHcCChhHHHHHH
Confidence 011122 2333332111111245899999999999999999999999999998
Q ss_pred cccC
Q psy11832 454 GLSE 457 (494)
Q Consensus 454 ~~~~ 457 (494)
.-+.
T Consensus 296 ~~~~ 299 (361)
T 1q14_A 296 TAQG 299 (361)
T ss_dssp HHC-
T ss_pred Hhhh
Confidence 6443
No 27
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=99.95 E-value=1.4e-29 Score=253.55 Aligned_cols=157 Identities=15% Similarity=0.170 Sum_probs=123.8
Q ss_pred eccccccccc-ccccccccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHHHh---hhccCCCCC
Q psy11832 231 MGTSLVVQPF-CSLVDKTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWMKE---GNLLGRMGI 306 (494)
Q Consensus 231 N~~p~~~h~~-a~l~~~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~~~---~i~~~~~~~ 306 (494)
+.+|+..|.. ++|+++|++.+||||||||||++|| +++|+|+|||+++.+|++|++.|+.+.... .... ....
T Consensus 106 ~a~Pn~~H~aLa~Le~~g~~~~viTQNVDgLh~rAG--~~~vielHGs~~~~~C~~C~~~~~~~~~~~~~~~~~~-~~~~ 182 (290)
T 3u31_A 106 EIEINNGHVALSTLESLGYLKSVVTQNVDGLHEASG--NTKVISLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFM-HQLP 182 (290)
T ss_dssp CCCCCHHHHHHHHHHHTTCEEEEEESCCSCHHHHTT--CSCEEETTEEEEEEEETTTCCEEECCTGGGSTTSSTT-TSSS
T ss_pred cCCCCHHHHHHHHHHHcCCCceEEEechHHHHHHcC--CCcEEEecCCcCcceeCCCCCcCChhHhhhccccccc-ccCC
Confidence 4578887765 4788889999999999999999999 689999999999999999999998765431 1111 1235
Q ss_pred CccCCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhccc--CCC-------CCCC
Q psy11832 307 TLGLHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLGLS--EGL-------GFDN 375 (494)
Q Consensus 307 p~c~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~~~--~g~-------~~~~ 375 (494)
|.|+ |+| ++||+||| |++|..++..+.+.+++||++||+||||+| +|++.|+..+ .|. +.+.
T Consensus 183 P~C~-Cgg---~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTSl~V---~Paa~l~~~a~~~g~~~v~IN~~~t~ 255 (290)
T 3u31_A 183 PECP-CGG---IFKPNIILFGEVVSSDLLKEAEEEIAKCDLLLVIGTSSTV---STATNLCHFACKKKKKIVEINISKTY 255 (290)
T ss_dssp CBCT-TSC---BEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCS---HHHHHHHHHHHHTTCCEEEEESSCCT
T ss_pred CCCC-CCC---EECCeEEEcCCCCCHHHHHHHHHHHhcCCEEEEECcCCcc---hhHHHHHHHHHHcCCEEEEECCCCCC
Confidence 7888 988 58888888 677888888888888899999999999999 9999998663 233 2233
Q ss_pred C-CCcccEEEeCChhHHHHHHHHH
Q psy11832 376 E-NNVRDVFLEGDCDSGCQKLADM 398 (494)
Q Consensus 376 ~-~~~~dl~i~g~~~~~~~~L~~~ 398 (494)
. +..+|++|.|+++++++ |++.
T Consensus 256 ~~~~~~d~~i~g~a~~vl~-~~~~ 278 (290)
T 3u31_A 256 ITNKMSDYHVCAKFSELTK-VANI 278 (290)
T ss_dssp TTTTTCSEEEESCGGGHHH-HHHH
T ss_pred CCCccceEEEECCHHHHHH-HHHH
Confidence 2 34689999999999654 5443
No 28
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=99.95 E-value=9.2e-30 Score=253.56 Aligned_cols=158 Identities=17% Similarity=0.128 Sum_probs=123.3
Q ss_pred ecccccccccc-cccc----cccccCCCCcchhhhhHhhCCCCCceeeccCccceeecCCCCCccchHHH--Hhhhc---
Q psy11832 231 MGTSLVVQPFC-SLVD----KTNIRGSDSDNIDNLERIAGLPDDKLVEAHGSFHTSHCLTCRKDYSVAWM--KEGNL--- 300 (494)
Q Consensus 231 N~~p~~~h~~a-~l~~----~~~l~~v~TQNID~Le~~AG~~~~~vvE~HGs~~~~~C~~C~~~y~~~~~--~~~i~--- 300 (494)
+.+|+..|... +|++ +|++.+||||||||||++|| +++|+|+|||+++.+|++|++.|+.+.. ...+.
T Consensus 82 ~~~Pn~~H~~La~Le~~~~~~g~~~~viTQNiDgLh~~AG--~~~vielHG~~~~~~C~~C~~~~~~~~~p~~~~~~~~~ 159 (273)
T 3riy_A 82 SKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAG--TKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKG 159 (273)
T ss_dssp TCCCCHHHHHHHHHHHHHHTTTCEEEEEESCCSCHHHHHT--CCSEEETTEEEEEEEETTTCCEEECCCSSSSGGGTTCC
T ss_pred hCCCCHHHHHHHHHHHhhhhcCceeEEEEecccchHhhcC--CCCEEEecCcCCeeEcCCCCCcccccccchhhhhhccc
Confidence 35677777655 5663 68899999999999999999 6899999999999999999999853210 00000
Q ss_pred -------c---CCCCCCcc--CCCCCCCCCCCCcEEe--ccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhhhc
Q psy11832 301 -------L---GRMGITLG--LHAGGLSSIPGGAEVF--SALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGLLG 366 (494)
Q Consensus 301 -------~---~~~~~p~c--~~C~g~~~i~~p~ivf--e~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l~~ 366 (494)
. .....|.| +.|+| ++||+||| |++|..++..+.+.+++||++||+||||+| +|++.|+.
T Consensus 160 ~~~~~~~~~~~~~~~~P~C~~~~Cgg---~lrP~VV~FGE~lp~~~~~~a~~~~~~aDl~lviGTSl~V---~Paa~l~~ 233 (273)
T 3riy_A 160 APEPGTQDASIPVEKLPRCEEAGCGG---LLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVV---YPAAMFAP 233 (273)
T ss_dssp CCSTTCCCCCCCGGGSCBCCGGGCCC---BEEEEECCTTSBCCHHHHHHHHHHHHHCSEEEEESCCSCE---ETGGGHHH
T ss_pred CCcccccccccccCCCCCCCCCCCCC---eeCCcEEEeCCcCCHHHHHHHHHHHhcCCEEEEEeeCCcc---hhHHHhHH
Confidence 0 01124778 77988 58899888 677888888888888999999999999999 99999975
Q ss_pred cc--CCC-------CCCCCCCcccEEEeCChhHHHHHHH
Q psy11832 367 LS--EGL-------GFDNENNVRDVFLEGDCDSGCQKLA 396 (494)
Q Consensus 367 ~~--~g~-------~~~~~~~~~dl~i~g~~~~~~~~L~ 396 (494)
.+ .|. +.+..+..+|+.|.|++++++|+|+
T Consensus 234 ~a~~~g~~~v~IN~~~t~~d~~~~~~i~g~~~~~l~~l~ 272 (273)
T 3riy_A 234 QVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEAL 272 (273)
T ss_dssp HHHHTTCCEEEEESSCCTTGGGSSEEEESCHHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCCCCcceeEEEeCCHHHHHHHHh
Confidence 32 333 3444567899999999999999884
No 29
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=82.19 E-value=0.53 Score=33.48 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=21.3
Q ss_pred eeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832 280 TSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315 (494)
Q Consensus 280 ~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~ 315 (494)
.-.|.+||++++.++++- .|.-+||-||--
T Consensus 3 iY~C~rCg~~fs~~el~~------lP~IrCpyCGyr 32 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKV------LPGVRCPYCGYK 32 (48)
T ss_dssp --CCCCTTTTCCCCCSCC------CSSSCCTTTCCS
T ss_pred EEEeeccCCCccHHHHhh------CCCcccCccCcE
Confidence 457999999999887542 345679999853
No 30
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=73.00 E-value=1.1 Score=40.23 Aligned_cols=28 Identities=25% Similarity=0.581 Sum_probs=20.2
Q ss_pred ccccCCCCcccchHHHHHHHhhcCCCCCCCCCCeee
Q psy11832 136 TSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLVK 171 (494)
Q Consensus 136 ~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~lr 171 (494)
..+|..|++.|... .....||.||+.++
T Consensus 132 ~y~C~~Cg~~~~~~--------~~~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 132 RYVCIGCGRKFSTL--------PPGGVCPDCGSKVK 159 (165)
T ss_dssp CEEESSSCCEESSC--------CGGGBCTTTCCBEE
T ss_pred EEECCCCCCcccCC--------CCCCcCCCCCCcce
Confidence 56899999987532 11248999998764
No 31
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=72.63 E-value=1.3 Score=39.01 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=27.7
Q ss_pred eccCccceeecCCCCCccchHHHHhhhccCCC-C----------CCccCCCCCC
Q psy11832 273 EAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRM-G----------ITLGLHAGGL 315 (494)
Q Consensus 273 E~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~-~----------~p~c~~C~g~ 315 (494)
++.-.-...+|.+||+.+..+.+++++..... + .-.||.|++.
T Consensus 63 ~i~~~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~ 116 (139)
T 3a43_A 63 EFVEEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSH 116 (139)
T ss_dssp EEEEECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCC
T ss_pred EEEecCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCC
Confidence 33334457899999999998775544432211 1 3569999984
No 32
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=70.65 E-value=2.7 Score=33.41 Aligned_cols=53 Identities=25% Similarity=0.481 Sum_probs=37.6
Q ss_pred CccccCCCCcccchHHHHHHH-------------------hhcCCCCCCCCCCeeeeeEEecCCCCChHHHHHHHhHc
Q psy11832 135 HTSHCLTCRKDYSVAWMKERI-------------------FAEVIPTCEKCNGLVKPDIVFFGENLPSRYFHRVDVDF 193 (494)
Q Consensus 135 ~~~~C~~C~~~~~~~~~~~~i-------------------~~~~~P~C~~Cgg~lrP~Vv~FgE~~~~~~~~~a~~~~ 193 (494)
+-..|.-|+...+...+.+++ ..+-+-+||.||.. |+|..+|.+.-+...+.+
T Consensus 7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEE------FyG~~Lp~~EaeKVFELL 78 (95)
T 2k5c_A 7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEE------FYGKTLPRREAEKVFELL 78 (95)
T ss_dssp -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCE------EETTSSCTTTHHHHHHHH
T ss_pred ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHH------HhcccCChHHHHHHHHHH
Confidence 346899999988777665443 11246789999985 899999987666665554
No 33
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=68.21 E-value=1.3 Score=31.46 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=21.1
Q ss_pred cCccccCCCCcccchHHHHHHHhhcCCC---CCCCCCCe
Q psy11832 134 FHTSHCLTCRKDYSVAWMKERIFAEVIP---TCEKCNGL 169 (494)
Q Consensus 134 ~~~~~C~~C~~~~~~~~~~~~i~~~~~P---~C~~Cgg~ 169 (494)
+...+|..|++.|+.+.-...-+. .+| +||.||..
T Consensus 2 m~~y~C~vCGyvyd~~~Gd~t~f~-~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 2 MQKYVCNVCGYEYDPAEHDNVPFD-QLPDDWCCPVCGVS 39 (46)
T ss_dssp CCCEEETTTCCEECGGGGTTCCGG-GSCTTCBCTTTCCB
T ss_pred CCEEECCCCCeEEeCCcCCCcchh-hCCCCCcCcCCCCc
Confidence 456799999999874321101111 233 79999963
No 34
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=65.32 E-value=4.8 Score=38.71 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=29.5
Q ss_pred CEEEecCCcCccccCCCCcccchHHHHHHHhhcCCCCCCCCCCee
Q psy11832 126 KLVEAHGSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLV 170 (494)
Q Consensus 126 ~v~elHG~~~~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~l 170 (494)
-|+.++|. .|..|+-..+...+..-.....+..||.||.+|
T Consensus 192 avv~v~~~----~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 192 SIVTIKKQ----ACGGCFIRLNDKIYTEVLTSGDMITCPYCGRIL 232 (256)
T ss_dssp SEEECBTT----BCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEE
T ss_pred eEEEeeCC----ccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeE
Confidence 47777775 799999988765544322345689999999864
No 35
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=60.65 E-value=2.2 Score=39.32 Aligned_cols=27 Identities=19% Similarity=0.319 Sum_probs=20.3
Q ss_pred cCccccCCCCcccchHHHHHHHhhcCCC-CCCCCCCe
Q psy11832 134 FHTSHCLTCRKDYSVAWMKERIFAEVIP-TCEKCNGL 169 (494)
Q Consensus 134 ~~~~~C~~C~~~~~~~~~~~~i~~~~~P-~C~~Cgg~ 169 (494)
....+|..||+.|+.+ ..| .||.||..
T Consensus 153 ~~~~~C~~CG~~~~g~---------~~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHEGT---------GAPELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEEEE---------ECCSBCTTTCCB
T ss_pred CceEEECCCCCEeeCC---------CCCCCCCCCcCC
Confidence 3478999999998632 234 89999974
No 36
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=58.92 E-value=3.4 Score=35.04 Aligned_cols=27 Identities=7% Similarity=-0.010 Sum_probs=20.5
Q ss_pred ceeecCCCCCccchHHHHhhhccCCCCCC-ccCCCCCC
Q psy11832 279 HTSHCLTCRKDYSVAWMKEGNLLGRMGIT-LGLHAGGL 315 (494)
Q Consensus 279 ~~~~C~~C~~~y~~~~~~~~i~~~~~~~p-~c~~C~g~ 315 (494)
...+|.+||+.|..+. +.. .||.|++.
T Consensus 72 ~~~~C~~CG~~~e~~~----------~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPNA----------LDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSCC----------STTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCCC----------CCCCcCccccCC
Confidence 4689999999987631 235 69999984
No 37
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=56.37 E-value=4.4 Score=34.33 Aligned_cols=27 Identities=22% Similarity=0.518 Sum_probs=20.7
Q ss_pred CccccCCCCcccchHHHHHHHhhcCCC-CCCCCCCe
Q psy11832 135 HTSHCLTCRKDYSVAWMKERIFAEVIP-TCEKCNGL 169 (494)
Q Consensus 135 ~~~~C~~C~~~~~~~~~~~~i~~~~~P-~C~~Cgg~ 169 (494)
-..+|.+|++.+..+ .... .||.||+.
T Consensus 72 ~~~~C~~CG~~~e~~--------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN--------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC--------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC--------CCCCCcCccccCC
Confidence 367999999987642 2356 79999987
No 38
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=54.74 E-value=3.9 Score=36.50 Aligned_cols=27 Identities=15% Similarity=0.271 Sum_probs=19.5
Q ss_pred ceeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832 279 HTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315 (494)
Q Consensus 279 ~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~ 315 (494)
+.-+|..||+.|+.. .+...||.||+.
T Consensus 131 ~~y~C~~Cg~~~~~~----------~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 131 WRYVCIGCGRKFSTL----------PPGGVCPDCGSK 157 (165)
T ss_dssp CCEEESSSCCEESSC----------CGGGBCTTTCCB
T ss_pred EEEECCCCCCcccCC----------CCCCcCCCCCCc
Confidence 457899999998643 122469999985
No 39
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=53.92 E-value=10 Score=29.30 Aligned_cols=27 Identities=15% Similarity=0.227 Sum_probs=19.3
Q ss_pred ceeecCCCCCccchHHHHhhhccCCCCCCccCCCCC
Q psy11832 279 HTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGG 314 (494)
Q Consensus 279 ~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g 314 (494)
..-.|.+||.++++.. .....|+.|+.
T Consensus 27 v~Y~C~~CG~~~e~~~---------~d~irCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLSR---------TDAVRCKDCGH 53 (70)
T ss_dssp CCEECSSSCCEECCCT---------TSTTCCSSSCC
T ss_pred EEEECCCCCCcceeCC---------CCCccCCCCCc
Confidence 4457999999876541 12357999998
No 40
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=52.83 E-value=8.5 Score=32.09 Aligned_cols=34 Identities=9% Similarity=-0.007 Sum_probs=22.5
Q ss_pred cceeecCCCCCccchHHHHhhhccCCCCCCccCCCCCCCCCCCC
Q psy11832 278 FHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGLSSIPGG 321 (494)
Q Consensus 278 ~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~~~i~~p 321 (494)
++-..|.+||..| . + ....+..||.|++- .+.+|
T Consensus 65 v~p~~C~~CG~~F-~----~----~~~kPsrCP~CkSe-~Ie~P 98 (105)
T 2gmg_A 65 IKPAQCRKCGFVF-K----A----EINIPSRCPKCKSE-WIEEP 98 (105)
T ss_dssp ECCCBBTTTCCBC-C----C----CSSCCSSCSSSCCC-CBCCC
T ss_pred EECcChhhCcCee-c----c----cCCCCCCCcCCCCC-ccCCc
Confidence 4567899999987 1 1 12345789999874 34444
No 41
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=52.49 E-value=16 Score=38.87 Aligned_cols=47 Identities=9% Similarity=0.201 Sum_probs=35.0
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
.+.+.+++||++|++|+.+.-.+...+...+ +..++|.|+.+|....
T Consensus 271 ~~~~~~~~aDlvl~iG~~~~~~~~~~~~~~~----~~~~~i~id~d~~~~~ 317 (556)
T 3hww_A 271 KATSELQQAQIVVQLGSSLTGKRLLQWQASC----EPEEYWIVDDIEGRLD 317 (556)
T ss_dssp HHHHHHTTCSEEEEESBCCCCHHHHHHHHHC----CCSEEEEEESSCSCCC
T ss_pred hhhhcccCCCEEEEcCCCcccHHHHHHHhcC----CCCeEEEECCCCccCC
Confidence 4556788999999999999765655555544 4458899998887654
No 42
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=49.01 E-value=7 Score=36.34 Aligned_cols=26 Identities=15% Similarity=0.056 Sum_probs=20.3
Q ss_pred cCccccCCCCcccchHHHHHHHhhcCCC-CCCCCCCe
Q psy11832 134 FHTSHCLTCRKDYSVAWMKERIFAEVIP-TCEKCNGL 169 (494)
Q Consensus 134 ~~~~~C~~C~~~~~~~~~~~~i~~~~~P-~C~~Cgg~ 169 (494)
...++|..|++.|+. ..| .||.||..
T Consensus 169 ~~~~~C~~CG~i~~g----------~~p~~CP~C~~~ 195 (202)
T 1yuz_A 169 DKFHLCPICGYIHKG----------EDFEKCPICFRP 195 (202)
T ss_dssp CCEEECSSSCCEEES----------SCCSBCTTTCCB
T ss_pred CcEEEECCCCCEEcC----------cCCCCCCCCCCC
Confidence 467899999999863 244 89999964
No 43
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=46.91 E-value=2.8 Score=36.73 Aligned_cols=24 Identities=13% Similarity=0.219 Sum_probs=16.0
Q ss_pred EEEecCCcCccccCCCCcccchHH
Q psy11832 127 LVEAHGSFHTSHCLTCRKDYSVAW 150 (494)
Q Consensus 127 v~elHG~~~~~~C~~C~~~~~~~~ 150 (494)
-+++.-.=-..+|.+|++.+....
T Consensus 61 ~L~i~~~p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 61 EIEFVEEEAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp EEEEEEECCEEEETTTCCEEEGGG
T ss_pred EEEEEecCCcEECCCCCCEEeccc
Confidence 334444445789999999876543
No 44
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=45.57 E-value=11 Score=29.90 Aligned_cols=26 Identities=23% Similarity=0.365 Sum_probs=17.0
Q ss_pred cCccceeecCCCCCccchHHHHhhhc
Q psy11832 275 HGSFHTSHCLTCRKDYSVAWMKEGNL 300 (494)
Q Consensus 275 HGs~~~~~C~~C~~~y~~~~~~~~i~ 300 (494)
|-.-+.+.|+-||+..+++++-++++
T Consensus 3 ~~~~~~~~~PlCG~~L~W~eLIeQML 28 (95)
T 2k5c_A 3 HHHHHMAKCPICGSPLKWEELIEEML 28 (95)
T ss_dssp -----CEECSSSCCEECHHHHHHHST
T ss_pred ccccccccCCcCCCccCHHHHHHHHH
Confidence 33456688999999999887766544
No 45
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=44.27 E-value=8.5 Score=34.78 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=19.1
Q ss_pred CccccCCCCcccchHHHHHHHhhcCCCCCCCCCCe
Q psy11832 135 HTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGL 169 (494)
Q Consensus 135 ~~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~ 169 (494)
..++|..||+.|.. .....||.||.+
T Consensus 137 ~~~~C~~CG~i~~~---------~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 137 KVYICPICGYTAVD---------EAPEYCPVCGAP 162 (170)
T ss_dssp CEEECTTTCCEEES---------CCCSBCTTTCCB
T ss_pred CeeEeCCCCCeeCC---------CCCCCCCCCCCC
Confidence 46789999999862 223489999964
No 46
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=40.73 E-value=19 Score=38.27 Aligned_cols=47 Identities=9% Similarity=-0.028 Sum_probs=31.5
Q ss_pred HhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 190 DVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 190 ~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
.+.++++|++|++|+.+.-.........+ ..+++++|.|+.+|....
T Consensus 267 ~~~l~~aDlvl~iG~~~~~~~~~~~~~~~--~~~~~~ii~id~d~~~~~ 313 (568)
T 2c31_A 267 AFALAQCDVCVLIGARLNWLMQHGKGKTW--GDELKKYVQIDIQANEMD 313 (568)
T ss_dssp HHHHHHCSEEEEESCCCSGGGGGGCSGGG--TTSCCEEEEEESCGGGTT
T ss_pred HhhhccCCEEEEECCCCccccccCccccc--CCCCCeEEEEeCCHHHhc
Confidence 34567899999999998643332222233 115788999998887653
No 47
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=40.37 E-value=48 Score=29.92 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=43.3
Q ss_pred cEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchh---------hhccc-------------CCCCCCCC---
Q psy11832 322 AEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMG---------LLGLS-------------EGLGFDNE--- 376 (494)
Q Consensus 322 ~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~---------l~~~~-------------~g~~~~~~--- 376 (494)
|+|||+ ..+..+|+++|+.||+|..=+| .|+|. +|-+. -+..|..-
T Consensus 84 d~v~EM------deIN~df~~tDv~lVIGANDvv---NpaA~~dp~SpI~GMPvl~v~kAk~ViV~KRsm~~GyAgv~Np 154 (180)
T 1pno_A 84 DEVFEL------EEINSSFQTADVAFVIGANDVT---NPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENE 154 (180)
T ss_dssp GGEEEH------HHHGGGGGGCSEEEEESCCGGG---CGGGTTCTTSTTTTCCCCCGGGSSEEEEEESSSCCCTTCCCCG
T ss_pred HHHhhH------HHHhhhhhhcCEEEEecccccc---CchhccCCCCCcCCCeeechhhCCEEEEEECCCCCCcCCCcCc
Confidence 666653 4567789999999999999988 66654 22110 01112111
Q ss_pred --CCcccEEEeCChhHHHHHHHHHh
Q psy11832 377 --NNVRDVFLEGDCDSGCQKLADML 399 (494)
Q Consensus 377 --~~~~dl~i~g~~~~~~~~L~~~l 399 (494)
-......+-|++.+.+.+|.+.+
T Consensus 155 LF~~~nt~MlfGDAK~~~~~l~~~l 179 (180)
T 1pno_A 155 LFFRNNTMMLFGDAKKMTEQIVQAM 179 (180)
T ss_dssp GGTSTTEEEEESCHHHHHHHHHHHH
T ss_pred ceecCCceEEeccHHHHHHHHHHHh
Confidence 12234577899988888887654
No 48
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=39.83 E-value=55 Score=30.14 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=43.4
Q ss_pred cEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchh---------hhccc-------------CCCCCCCCC--
Q psy11832 322 AEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMG---------LLGLS-------------EGLGFDNEN-- 377 (494)
Q Consensus 322 ~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~---------l~~~~-------------~g~~~~~~~-- 377 (494)
|+||| +..+..+|+++|+.||+|..=+| .|+|. +|-+. -+..|.--+
T Consensus 107 d~v~E------MdeIN~df~~tDv~lVIGANDvV---NPaA~~dp~SpI~GMPvL~v~kAk~ViV~KRsm~~GyAgv~Np 177 (203)
T 2fsv_C 107 DEVFE------LEEINSSFQTADVAFVIGANDVT---NPAAKTDPSSPIYGMPILDVWKAGTVLFIKRSMASGYAGVENE 177 (203)
T ss_dssp GGEEE------HHHHGGGSTTCSEEEEESCCGGG---CGGGTSCTTSTTTTCCCCCGGGSSEEEEEESSSCCCTTCCCCG
T ss_pred HHHhh------HHHHhhhhhhcCEEEEecccccc---CchhhcCCCCCcCCCeeeccccCCEEEEEECCCCCCcCCCcCc
Confidence 56665 34567789999999999999998 66654 22110 011121111
Q ss_pred ---CcccEEEeCChhHHHHHHHHHh
Q psy11832 378 ---NVRDVFLEGDCDSGCQKLADML 399 (494)
Q Consensus 378 ---~~~dl~i~g~~~~~~~~L~~~l 399 (494)
......+-|++.+.+.+|++.+
T Consensus 178 LF~~~nt~MlfGDAK~~~~~l~~~l 202 (203)
T 2fsv_C 178 LFFRNNTMMLFGDAKKMTEQIVQAM 202 (203)
T ss_dssp GGGSTTEEEEESCHHHHHHHHHHHC
T ss_pred ceecCCceEEeccHHHHHHHHHHHh
Confidence 1234567899988888887654
No 49
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=39.57 E-value=28 Score=31.60 Aligned_cols=35 Identities=14% Similarity=0.003 Sum_probs=25.4
Q ss_pred CCcEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchh
Q psy11832 320 GGAEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMG 363 (494)
Q Consensus 320 ~p~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~ 363 (494)
|=|+|||+. .+..+|+++|+.||+|..=+| .|+|.
T Consensus 89 PYd~v~EMd------eIN~df~~tDv~lVIGANDvV---NPaA~ 123 (186)
T 2bru_C 89 PYDIVLEMD------EINDDFADTDTVLVIGANDTV---NPAAQ 123 (186)
T ss_dssp CTTTEEESC------CCHHHHHHCSEEEECBCGGGG---CGGGT
T ss_pred CHHHHhhHH------HHhcccccCCEEEEecccccc---Ccccc
Confidence 336777653 234567789999999999998 66654
No 50
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=38.99 E-value=39 Score=30.62 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=44.6
Q ss_pred cEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhh---------hccc-------------CCCCCCCCC--
Q psy11832 322 AEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGL---------LGLS-------------EGLGFDNEN-- 377 (494)
Q Consensus 322 ~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l---------~~~~-------------~g~~~~~~~-- 377 (494)
|+|||+ ..+..+|+++|+.||+|..=+| .|+|.- |-+. -+..|..-+
T Consensus 83 d~v~EM------deIN~df~~tDv~lVIGANDvV---NPaA~~dp~SpI~GMPvl~v~kAk~ViV~KRsm~~GyAgv~Np 153 (184)
T 1d4o_A 83 DIVLEM------DEINHDFPDTDLVLVIGANDTV---NSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNP 153 (184)
T ss_dssp GGEEEH------HHHGGGGGGCSEEEEESCSGGG---CTHHHHCTTSTTTTCCCCCGGGSSCEEEEESSSCCCTTCCCCG
T ss_pred HHHHhH------HHHhhhhhhcCEEEEecCCccC---CCccccCCCCCccCCeeeehhhCCEEEEEECCCCCCcCCCcCc
Confidence 566653 4567789999999999999999 666643 2110 011221111
Q ss_pred ---CcccEEEeCChhHHHHHHHHHhC
Q psy11832 378 ---NVRDVFLEGDCDSGCQKLADMLG 400 (494)
Q Consensus 378 ---~~~dl~i~g~~~~~~~~L~~~lg 400 (494)
......+-|++.+.+.+|.+.+.
T Consensus 154 LF~~~nt~MlfGDAK~~~~~l~~~l~ 179 (184)
T 1d4o_A 154 IFYKPNTAMLLGDAKKTCDALQAKVR 179 (184)
T ss_dssp GGGSTTEEEEESCHHHHHHHHHHHHH
T ss_pred ceecCCceEEeccHHHHHHHHHHHHH
Confidence 22345778999999998877653
No 51
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=36.83 E-value=20 Score=37.98 Aligned_cols=48 Identities=17% Similarity=0.213 Sum_probs=33.8
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP 239 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~ 239 (494)
.+.+.++++|++|++|+.+.-.+...+... .+++++|.|+.+|....+
T Consensus 271 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~----~~~~~~i~id~d~~~~~~ 318 (563)
T 2vk8_A 271 EVKEAVESADLILSVGALLSDFNTGSFSYS----YKTKNIVEFHSDHMKIRN 318 (563)
T ss_dssp HHHHHHHTCSEEEEESCCCCTTTTTTTCCC----CCCSCEEEECSSEEEETT
T ss_pred HHHHHHHhCCEEEEECCCCccccccccccC----CCCCeEEEEeCCceEECC
Confidence 345567889999999998865555444322 356789999988876543
No 52
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=34.78 E-value=48 Score=30.64 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=44.7
Q ss_pred cEEeccCChhHHHhhhcCCCCCCeEEEeccccccCCCCcchhh---------hccc-------------CCCCCCCCC--
Q psy11832 322 AEVFSALCLEFGVHSASAPPHCPRLLINKEKVGVGSRNPLMGL---------LGLS-------------EGLGFDNEN-- 377 (494)
Q Consensus 322 ~ivfe~l~~~~~~~~~~~~~~~Dlliv~GTSl~V~~~~P~a~l---------~~~~-------------~g~~~~~~~-- 377 (494)
|+|||+ ..+..+|+++|+.||+|..=+| .|+|.- |-+. -+..|.--+
T Consensus 106 d~v~EM------deIN~df~~tDv~lVIGANDvV---NPaA~~dp~SpI~GMPvL~v~kAk~ViV~KRsm~~GyAgv~Np 176 (207)
T 1djl_A 106 DIVLEM------DEINHDFPDTDLVLVIGANDTV---NSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNP 176 (207)
T ss_dssp GGEEEH------HHHGGGGGGCSEEEEESCCGGG---CTHHHHCTTSTTTTCCCCCGGGSSEEEEEESSSCCCTTCCCCG
T ss_pred HHHhhH------HHHhhhhhhcCEEEEecccccc---CCccccCCCCCccCCeeecceecCEEEEEECCCCCCcCCCcCc
Confidence 566653 4567789999999999999999 666642 2110 011221111
Q ss_pred ---CcccEEEeCChhHHHHHHHHHhC
Q psy11832 378 ---NVRDVFLEGDCDSGCQKLADMLG 400 (494)
Q Consensus 378 ---~~~dl~i~g~~~~~~~~L~~~lg 400 (494)
......+-|++.+.+.+|++.+.
T Consensus 177 LF~~~nt~MlfGDAK~~~~~l~~~l~ 202 (207)
T 1djl_A 177 IFYKPNTAMLLGDAKKTCDALQAKVR 202 (207)
T ss_dssp GGGSTTEEEEESCHHHHHHHHHHHHH
T ss_pred ceecCCceEEeccHHHHHHHHHHHHH
Confidence 22345778999999998877653
No 53
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=34.54 E-value=42 Score=35.75 Aligned_cols=44 Identities=9% Similarity=0.242 Sum_probs=32.1
Q ss_pred hHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 191 VDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 191 ~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
..+.+||++|++|+.+.-.+...|... .+++++|.|+.+|....
T Consensus 285 ~~~~~aDlvl~~G~~~~~~~~~~~~~~----~~~~~~i~id~d~~~~~ 328 (578)
T 3lq1_A 285 IDKLTPEVVIRFGSMPVSKPLKNWLEQ----LSDIRFYVVDPGAAWKD 328 (578)
T ss_dssp HHHTCCSEEEEESSCCSCHHHHHHHHH----CCSSEEEEECTTCCCCC
T ss_pred cccCCCCEEEEeCCcccchhHHHHHhc----CCCCEEEEECCCCCcCC
Confidence 357899999999997765555555433 36788999998886543
No 54
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=33.79 E-value=27 Score=36.98 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=30.3
Q ss_pred HhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 190 DVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 190 ~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
.+.++++|++|++|+.+.-...... ..+ .+++++|.|+.+|....
T Consensus 265 ~~~l~~aDlvl~iG~~~~~~~~~~~-~~~---~~~~~~i~id~d~~~~~ 309 (564)
T 2q28_A 265 SFALANADVVMLVGARLNWLLAHGK-KGW---AADTQFIQLDIEPQEID 309 (564)
T ss_dssp HHHHHHCSEEEEESCCCSGGGGGGT-TTS---CTTCEEEEEESCGGGTT
T ss_pred HhHhhcCCEEEEECCcccccccccc-ccc---CCCCeEEEEeCCHHHhc
Confidence 3456789999999998853322111 112 36788999998887654
No 55
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=33.73 E-value=23 Score=37.40 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=33.8
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
.+.+.++++|++|++|+.+...+...+... .++.++|.|+.+|....
T Consensus 269 ~~~~~l~~aD~vl~iG~~~~~~~~~~~~~~----~~~~~~i~id~d~~~~~ 315 (552)
T 1ovm_A 269 AVKEAIEGADTVLCVGTRFTDTLTAGFTHQ----LTPAQTIEVQPHAARVG 315 (552)
T ss_dssp HHHHHHHTSSEEEEESCCCCTTTTTTTCCC----CCTTTEEEECSSEEEET
T ss_pred HHHHHHHhCCEEEEECCCCCcccccccccC----CCCCeEEEEeCChheeC
Confidence 455667889999999998876665554322 35678899988877653
No 56
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=31.93 E-value=29 Score=31.30 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=22.2
Q ss_pred CCCCeEEEeCcCCC--hhhhhhhhhhhhhcCCCceEEEEe
Q psy11832 194 PKADLLLIMGTSLV--VQPFCSLVDKVDVDFPKADLLLIM 231 (494)
Q Consensus 194 ~~aDlllvvGTSl~--V~pa~~lv~~~~~~~~~a~lv~IN 231 (494)
++|||+|+||+.+. ... .+-...+ .|++++|.|+
T Consensus 107 ~~aDLvI~iG~rf~~~~~~-t~~~~~f---ap~akii~Id 142 (174)
T 1ytl_A 107 GNYDLVLMLGSIYYHGSQM-LAAIKNF---APHIRALAID 142 (174)
T ss_dssp CCCSEEEEESCCHHHHHHH-HHHHHHH---CTTCEEEECS
T ss_pred CCCCEEEEECCcCCccccc-ccccccc---CCCCeEEEeC
Confidence 89999999999874 221 1222333 3677777774
No 57
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=31.52 E-value=25 Score=31.23 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=22.9
Q ss_pred hHcCCCCeEEEeCcCC--ChhhhhhhhhhhhhcCCCceEEEEe
Q psy11832 191 VDFPKADLLLIMGTSL--VVQPFCSLVDKVDVDFPKADLLLIM 231 (494)
Q Consensus 191 ~~~~~aDlllvvGTSl--~V~pa~~lv~~~~~~~~~a~lv~IN 231 (494)
+.+++||++|++||.+ .-.....+-.. .+ +++|.++
T Consensus 103 ~~~~~aDlvl~iG~~~~~~~~~t~~~~~~----~~-~~iI~i~ 140 (170)
T 3cf4_G 103 DGNGNYDMIITIGFKKFYINQVLSAAKNF----SN-LKTIAIE 140 (170)
T ss_dssp SSSCCCSEEEEESCCHHHHHHHHHHHHHH----CC-CCEEECS
T ss_pred HHhhcCCEEEEECCccCcccccccccccc----CC-CeEEEEC
Confidence 4578999999999988 54433333222 24 6666554
No 58
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=31.08 E-value=8.7 Score=27.85 Aligned_cols=34 Identities=26% Similarity=0.522 Sum_probs=20.5
Q ss_pred CccccCCCCcccchHHH--HHHHhh----cCCC---CCCCCCC
Q psy11832 135 HTSHCLTCRKDYSVAWM--KERIFA----EVIP---TCEKCNG 168 (494)
Q Consensus 135 ~~~~C~~C~~~~~~~~~--~~~i~~----~~~P---~C~~Cgg 168 (494)
...+|..|++.|+.+.- ...|.. ..+| +||.||.
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 2 DIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGA 44 (52)
T ss_dssp CCEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCC
T ss_pred CcEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCC
Confidence 46799999999874321 011111 2345 5999986
No 59
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=31.02 E-value=17 Score=33.28 Aligned_cols=28 Identities=11% Similarity=-0.046 Sum_probs=19.8
Q ss_pred cceeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832 278 FHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315 (494)
Q Consensus 278 ~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~ 315 (494)
.....|..||..|+.+ .++-.||.|+..
T Consensus 153 ~~~~~C~~CG~~~~g~----------~~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHEGT----------GAPELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEEEE----------ECCSBCTTTCCB
T ss_pred CceEEECCCCCEeeCC----------CCCCCCCCCcCC
Confidence 3468899999998732 122379999874
No 60
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=30.72 E-value=19 Score=33.26 Aligned_cols=22 Identities=5% Similarity=-0.133 Sum_probs=15.3
Q ss_pred HHHHHHHHHHcCCchhhhhhhc
Q psy11832 433 DSGCQKLADMLGWGIPLMGLLG 454 (494)
Q Consensus 433 D~~~~~l~~~lgW~~el~~l~~ 454 (494)
|+|++.||+.|.=..-|..|-.
T Consensus 56 d~ga~~la~aL~~N~~L~~L~L 77 (197)
T 1pgv_A 56 KERIRSLIEAACNSKHIEKFSL 77 (197)
T ss_dssp HHHHHHHHHHHTTCSCCCEEEC
T ss_pred HHHHHHHHHHHhhCCCcCEEEc
Confidence 7888888888865555555543
No 61
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=30.64 E-value=27 Score=37.09 Aligned_cols=45 Identities=13% Similarity=0.048 Sum_probs=32.5
Q ss_pred HHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832 189 VDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV 237 (494)
Q Consensus 189 a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~ 237 (494)
+.+.++++|++|++|+.+.-.....+... .+++++|.|+.+|...
T Consensus 270 ~~~~l~~aDlvl~iG~~~~~~~~~~~~~~----~~~~~~i~id~d~~~~ 314 (566)
T 2vbi_A 270 VQELVETSDALLCIAPVFNDYSTVGWSAW----PKGPNVILAEPDRVTV 314 (566)
T ss_dssp HHHHHHTCSEEEEESCCCBTTTTTTTTSC----CCSTTEEEECSSEEEE
T ss_pred HHHHHHhCCEEEEECCCcccccccccccc----CCCCcEEEEeCChhee
Confidence 34457789999999998866655554432 3677889998888764
No 62
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=30.56 E-value=28 Score=36.56 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=34.0
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
.+.+.++++|++|++|+.+.-.....+...+ .+++++|.|+.+|....
T Consensus 259 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~~---~~~~~~i~id~d~~~~~ 306 (528)
T 1q6z_A 259 AISQLLEGHDVVLVIGAPVFRYHQYDPGQYL---KPGTRLISVTCDPLEAA 306 (528)
T ss_dssp HHHHHHTTCSEEEEESSCTTCCCSCCCSCSS---CTTCEEEEEESCHHHHH
T ss_pred HHHHHHhcCCEEEEECCCCccccccCcCCcC---CCCCeEEEEeCCHHHhC
Confidence 4556788999999999987665554443322 24778999998886643
No 63
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=30.53 E-value=20 Score=31.51 Aligned_cols=29 Identities=14% Similarity=0.157 Sum_probs=21.8
Q ss_pred cCccceeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832 275 HGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315 (494)
Q Consensus 275 HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~ 315 (494)
-|.+.-.+|.+||+.+- .|.+.|++|++.
T Consensus 42 ~g~L~~~rC~~CG~~~f------------PPr~~Cp~C~s~ 70 (145)
T 2gnr_A 42 QNKIIGSKCSKCGRIFV------------PARSYCEHCFVK 70 (145)
T ss_dssp TTCCEEEECTTTCCEEE------------SCCSEETTTTEE
T ss_pred CCEEEEEEECCCCcEEe------------CCCCCCCCCCCC
Confidence 46788899999998541 345679999863
No 64
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=30.26 E-value=37 Score=36.35 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=31.0
Q ss_pred HHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 189 VDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 189 a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
+.+.+++||++|++|+.+.. ..+...+ .+++++|.|+.+|....
T Consensus 270 ~~~~l~~aDlvl~iG~~~~~---~~~~~~~---~~~~~~i~id~d~~~~~ 313 (603)
T 4feg_A 270 ANEALAQADVVLFVGNNYPF---AEVSKAF---KNTRYFLQIDIDPAKLG 313 (603)
T ss_dssp HHHHHHHCSEEEEESCCCTT---TTTTTTT---TTCSEEEEEESCGGGTT
T ss_pred HHHHHHhCCEEEEECCCCCc---ccccccC---CCCCeEEEEeCCHHHhC
Confidence 44567789999999998863 2232222 24788999998887754
No 65
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=30.07 E-value=7.5 Score=28.53 Aligned_cols=35 Identities=34% Similarity=0.518 Sum_probs=20.8
Q ss_pred CccccCCCCcccchHHH--HHHHhh----cCCC---CCCCCCCe
Q psy11832 135 HTSHCLTCRKDYSVAWM--KERIFA----EVIP---TCEKCNGL 169 (494)
Q Consensus 135 ~~~~C~~C~~~~~~~~~--~~~i~~----~~~P---~C~~Cgg~ 169 (494)
...+|..|++.|+.+.- ...|.. ..+| +||.||..
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 2 RKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVG 45 (55)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCC
T ss_pred CcEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 46789999999864320 011111 1245 69999963
No 66
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=30.03 E-value=25 Score=27.06 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=22.3
Q ss_pred CcCccccCCCCcccchHHH--HHHHhh----cCCC---CCCCCCCe
Q psy11832 133 SFHTSHCLTCRKDYSVAWM--KERIFA----EVIP---TCEKCNGL 169 (494)
Q Consensus 133 ~~~~~~C~~C~~~~~~~~~--~~~i~~----~~~P---~C~~Cgg~ 169 (494)
.+...+|..|++.|+.+.- ...|.. ..+| +||.||..
T Consensus 4 ~m~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 4 DEGKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp CSSCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred CCceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCC
Confidence 4567899999999874320 011111 1245 69999963
No 67
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=29.70 E-value=9.1 Score=30.43 Aligned_cols=36 Identities=28% Similarity=0.682 Sum_probs=22.2
Q ss_pred cCccccCCCCcccchHHH--HHHHhh----cCCC---CCCCCCCe
Q psy11832 134 FHTSHCLTCRKDYSVAWM--KERIFA----EVIP---TCEKCNGL 169 (494)
Q Consensus 134 ~~~~~C~~C~~~~~~~~~--~~~i~~----~~~P---~C~~Cgg~ 169 (494)
+...+|..|++.|+.+.- ...|.. ..+| +||.||..
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 567899999999874320 011111 2355 69999963
No 68
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=29.68 E-value=26 Score=26.48 Aligned_cols=27 Identities=19% Similarity=0.520 Sum_probs=19.7
Q ss_pred ccccCCCCcccchHHHHHHHhhcCCCCCCCCCCe
Q psy11832 136 TSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGL 169 (494)
Q Consensus 136 ~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~ 169 (494)
...|..|+...+.. ....-+|+.||..
T Consensus 21 ~Y~C~~Cg~~~~l~-------~~~~iRC~~CG~R 47 (63)
T 3h0g_L 21 IYLCADCGARNTIQ-------AKEVIRCRECGHR 47 (63)
T ss_dssp CCBCSSSCCBCCCC-------SSSCCCCSSSCCC
T ss_pred EEECCCCCCeeecC-------CCCceECCCCCcE
Confidence 56899999986533 2346789999964
No 69
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=29.16 E-value=45 Score=35.50 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=32.5
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP 239 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~ 239 (494)
.+.+.+.++|++|++|+.+.-..... ...+ .+++++|.|+.+|....+
T Consensus 271 ~~~~~l~~aDlvl~iG~~~~~~~~~~-~~~~---~~~~~~i~id~d~~~~~~ 318 (590)
T 1ybh_A 271 YANYAVEHSDLLLAFGVRFDDRVTGK-LEAF---ASRAKIVHIDIDSAEIGK 318 (590)
T ss_dssp HHHHHHHHCSEEEEESCCCCHHHHSS-GGGT---TTTSEEEEEESCTTTTTS
T ss_pred HHHHHHHhCCEEEEEcCCCCccccCc-cccc---CCCCeEEEEECCHHHhCC
Confidence 34556788999999999886432222 2222 357789999988877543
No 70
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=28.16 E-value=32 Score=36.51 Aligned_cols=46 Identities=11% Similarity=0.211 Sum_probs=32.3
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV 237 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~ 237 (494)
.+.+.++++|++|++|+.+.-.....+... .+++++|.|+.+|...
T Consensus 288 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~----~~~~~~i~id~d~~~~ 333 (570)
T 2vbf_A 288 SLKNFVESADFILMLGVKLTDSSTGAFTHH----LDENKMISLNIDEGII 333 (570)
T ss_dssp HHHHHHHHCSEEEEESCCCCGGGTTTTCCC----CCGGGEEEECSSCEEE
T ss_pred HHHHHHHhCCEEEEECCCcccccccccccC----CCCCeEEEEeCCHHHh
Confidence 344567789999999998865555444322 3567889998887654
No 71
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=28.14 E-value=26 Score=37.21 Aligned_cols=44 Identities=18% Similarity=0.165 Sum_probs=31.2
Q ss_pred HhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832 190 DVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV 237 (494)
Q Consensus 190 ~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~ 237 (494)
.+.++++|++|++|+.+.-.....+... .+++++|.|+.+|...
T Consensus 271 ~~~l~~aDlvl~iG~~~~~~~~~~~~~~----~~~~~~i~id~d~~~~ 314 (568)
T 2wvg_A 271 EKTMKEADAVIALAPVFNDYSTTGWTDI----PDPKKLVLAEPRSVVV 314 (568)
T ss_dssp HHHHHHCSEEEEESCCCBTTTTTTTTCC----CCTTTEEEECSSEEEE
T ss_pred HHHHHhCCEEEEECCCcccccccccccC----CCCCcEEEEeCChhhc
Confidence 3456789999999998865554444332 3677889999888764
No 72
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=27.30 E-value=34 Score=33.17 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=48.7
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccccccccccc--ccCCCCcchhhhhHhh
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTN--IRGSDSDNIDNLERIA 264 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~a~l~~~~~--l~~v~TQNID~Le~~A 264 (494)
.+...+.+||++++-|||+.=.....+++.+ +++..|.+-.-.++.++ .+.+.|. +..+.-.|.|.+-+..
T Consensus 179 ~~~~~lp~~D~viiTgstlvN~Tl~~lL~~~----~~a~~vvl~GPStp~~P--~lf~~Gv~~laG~~V~d~~~~~~~i 251 (270)
T 3l5o_A 179 ASEFILPECDYVYITCASVVDKTLPRLLELS----RNARRITLVGPGTPLAP--VLFEHGLQELSGFMVKDNARAFRIV 251 (270)
T ss_dssp GHHHHGGGCSEEEEETHHHHHTCHHHHHHHT----TTSSEEEEESTTCCCCG--GGGGTTCSEEEEEEESCHHHHHHHH
T ss_pred HHHHhhccCCEEEEEeehhhcCCHHHHHhhC----CCCCEEEEECCCchhhH--HHHhcCcCEEEEEEEcCHHHHHHHH
Confidence 4566889999999999999999999999887 55555555544455555 3555553 3344555677666543
No 73
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=27.14 E-value=24 Score=30.81 Aligned_cols=28 Identities=14% Similarity=0.148 Sum_probs=20.8
Q ss_pred CccceeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832 276 GSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315 (494)
Q Consensus 276 Gs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~ 315 (494)
|-|.-.+|.+||+.+- .|.+.||+|++.
T Consensus 43 grL~~~rC~~CG~~~~------------PPr~~Cp~C~s~ 70 (145)
T 3irb_A 43 NKIIGSKCSKCGRIFV------------PARSYCEHCFVK 70 (145)
T ss_dssp TCCEEEECTTTCCEEE------------SCCSEETTTTEE
T ss_pred CeEEEEEeCCCCcEEc------------CchhhCcCCCCC
Confidence 5677899999998541 345679999863
No 74
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=26.68 E-value=23 Score=25.90 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=20.9
Q ss_pred CccccCCCCcccchHHH--HHHHhh----cCCC---CCCCCCCe
Q psy11832 135 HTSHCLTCRKDYSVAWM--KERIFA----EVIP---TCEKCNGL 169 (494)
Q Consensus 135 ~~~~C~~C~~~~~~~~~--~~~i~~----~~~P---~C~~Cgg~ 169 (494)
...+|..|+..|+.+.- ...|.. ..+| +||.||..
T Consensus 2 ~~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 2 KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVG 45 (54)
T ss_dssp CCEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred CceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCc
Confidence 46789999999874321 011111 1234 69999974
No 75
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=26.61 E-value=43 Score=35.74 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=31.7
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQ 238 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h 238 (494)
.+.+.++++|++|++|+.+.-.... + ..+ .+++++|.|+.+|....
T Consensus 264 ~~~~~l~~aDlvl~iG~~~~~~~~~-~-~~~---~~~~~~i~id~d~~~~~ 309 (589)
T 2pgn_A 264 SANDMMAAADFVLVLGSRLSDWGIA-Q-GYI---TKMPKFVHVDTDPAVLG 309 (589)
T ss_dssp HHHHHHHHCSEEEEESCCCCTTTTT-T-TTT---CCCCSEEEEESCGGGTT
T ss_pred HHHHHHhhCCEEEEECCCccccccc-c-ccc---CCCCeEEEEeCCHHHHC
Confidence 3445667899999999987544333 2 222 36778999998887654
No 76
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=25.51 E-value=60 Score=34.78 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=30.5
Q ss_pred HHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832 189 VDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV 237 (494)
Q Consensus 189 a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~ 237 (494)
+.+.++++|++|++|+.+.-.....+ ..+ .+++++|.|+.+|...
T Consensus 287 ~~~~l~~aDlvl~iG~~~~~~~~~~~-~~~---~~~~~~i~id~d~~~~ 331 (616)
T 2pan_A 287 GNATLLASDMVFGIGNRFANRHTGSV-EKY---TEGRKIVHIDIEPTQI 331 (616)
T ss_dssp HHHHHHHCSEEEEESCCCCHHHHSSH-HHH---HTTCEEEEEESCGGGT
T ss_pred HHHHHHhCCEEEEECCCCcccccCcc-ccc---CCCCeEEEEeCCHHHh
Confidence 44566789999999998764322222 222 2567889999888664
No 77
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=25.48 E-value=39 Score=32.77 Aligned_cols=69 Identities=19% Similarity=0.268 Sum_probs=46.7
Q ss_pred HHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEeccccccccccccccccc--ccCCCCcchhhhhHh
Q psy11832 189 VDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQPFCSLVDKTN--IRGSDSDNIDNLERI 263 (494)
Q Consensus 189 a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~~a~l~~~~~--l~~v~TQNID~Le~~ 263 (494)
+...+..||++++-|||+.=.....++..+ ++++.+++-...+..++ .|.+.|. +..+.-.+.|.+-+.
T Consensus 180 ~e~ll~~aD~viiTGsTlvN~Ti~~lL~~~----~~a~~vvl~GPS~p~~P--~lf~~Gv~~l~G~~V~D~~~~~~~ 250 (270)
T 2h1q_A 180 SEFILPECDYVYITCASVVDKTLPRLLELS----RNARRITLVGPGTPLAP--VLFEHGLQELSGFMVKDNARAFRI 250 (270)
T ss_dssp HHHHGGGCSEEEEETHHHHHTCHHHHHHHT----TTSSEEEEESTTCCCCG--GGGGTTCSEEEEEEESCHHHHHHH
T ss_pred HHHHhhcCCEEEEEeeeeecCCHHHHHHhC----ccCCeEEEEecChhhhH--HHHhcCcCEEEEeEecCHHHHHHH
Confidence 344789999999999999999999999888 44534444444456555 3555553 334444566666553
No 78
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=24.50 E-value=36 Score=30.60 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=18.4
Q ss_pred ceeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832 279 HTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315 (494)
Q Consensus 279 ~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~ 315 (494)
....|..||..|.. ..+..||.|+..
T Consensus 137 ~~~~C~~CG~i~~~-----------~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 137 KVYICPICGYTAVD-----------EAPEYCPVCGAP 162 (170)
T ss_dssp CEEECTTTCCEEES-----------CCCSBCTTTCCB
T ss_pred CeeEeCCCCCeeCC-----------CCCCCCCCCCCC
Confidence 34669999998861 123479999864
No 79
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=23.99 E-value=36 Score=24.49 Aligned_cols=34 Identities=24% Similarity=0.408 Sum_probs=20.1
Q ss_pred ccccCCCCcccchHHH--HHHHhh----cCCC---CCCCCCCe
Q psy11832 136 TSHCLTCRKDYSVAWM--KERIFA----EVIP---TCEKCNGL 169 (494)
Q Consensus 136 ~~~C~~C~~~~~~~~~--~~~i~~----~~~P---~C~~Cgg~ 169 (494)
..+|..|++.|+.+.- ...|.. ..+| +||.||..
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAP 44 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCC
Confidence 4689999999864310 011111 1345 69999963
No 80
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=23.85 E-value=31 Score=27.74 Aligned_cols=35 Identities=31% Similarity=0.580 Sum_probs=21.4
Q ss_pred cCccccCCCCcccchHHH--HHHHh----hcCCC---CCCCCCC
Q psy11832 134 FHTSHCLTCRKDYSVAWM--KERIF----AEVIP---TCEKCNG 168 (494)
Q Consensus 134 ~~~~~C~~C~~~~~~~~~--~~~i~----~~~~P---~C~~Cgg 168 (494)
+...+|..|++.|+.+.- ...|. -..+| +||.||.
T Consensus 33 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 76 (87)
T 1s24_A 33 YLKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGA 76 (87)
T ss_dssp CCEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCC
T ss_pred CceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCC
Confidence 567899999999864310 00111 11345 5999996
No 81
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=23.50 E-value=48 Score=35.07 Aligned_cols=43 Identities=14% Similarity=0.174 Sum_probs=30.8
Q ss_pred cCCCCeEEEeCcCCChhhhhhhhhhhhhcCC-CceEEEEecccccccc
Q psy11832 193 FPKADLLLIMGTSLVVQPFCSLVDKVDVDFP-KADLLLIMGTSLVVQP 239 (494)
Q Consensus 193 ~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~-~a~lv~IN~~p~~~h~ 239 (494)
++++|++|++|+.+.-.....+-.. .+ ++++|.|+.+|....+
T Consensus 267 ~~~aDlvl~iG~~~~~~~~~~~~~~----~~~~~~~i~id~d~~~~~~ 310 (563)
T 2uz1_A 267 DAAPDLVLMLGARFGLNTGHGSGQL----IPHSAQVIQVDPDACELGR 310 (563)
T ss_dssp TCCCSEEEEESCCSSGGGTTTSCSS----SCTTSEEEEECSCGGGTTS
T ss_pred hcCCCEEEEECCCCccccccccccc----CCCCCeEEEEECCHHHhCC
Confidence 7889999999998876554333222 24 6789999988876543
No 82
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=23.22 E-value=62 Score=34.27 Aligned_cols=46 Identities=15% Similarity=0.011 Sum_probs=31.7
Q ss_pred HHhHcCCCCeEEEeCcC-CChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832 189 VDVDFPKADLLLIMGTS-LVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP 239 (494)
Q Consensus 189 a~~~~~~aDlllvvGTS-l~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~ 239 (494)
+.+.++++|++|++|+. +.-.....+. . .+++++|.|+.+|....+
T Consensus 281 ~~~~l~~aDlvl~iG~~~~~~~~~~~~~--~---~~~~~~i~id~d~~~~~~ 327 (573)
T 2iht_A 281 LQTMFAPVDLVLTVGYDYAEDLRPSMWQ--K---GIEKKTVRISPTVNPIPR 327 (573)
T ss_dssp HHHHHTTCCEEEEETCCGGGCCCHHHHC--C---SSCCEEEEEESSCCSCTT
T ss_pred HHHHHhhCCEEEEECCCccccccccccC--C---CCCCeEEEEeCCHHHhCC
Confidence 44567899999999998 6433333332 1 257789999988876543
No 83
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.12 E-value=71 Score=20.46 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=23.3
Q ss_pred ecCCcCccccCCCCcccchHH-HHHH--Hhh-cCCCCCCCCC
Q psy11832 130 AHGSFHTSHCLTCRKDYSVAW-MKER--IFA-EVIPTCEKCN 167 (494)
Q Consensus 130 lHG~~~~~~C~~C~~~~~~~~-~~~~--i~~-~~~P~C~~Cg 167 (494)
.|-.-....|..|++.+.... +... +.. .....|+.||
T Consensus 4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg 45 (45)
T 2epq_A 4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG 45 (45)
T ss_dssp CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence 355556778999999875433 2222 222 2355699986
No 84
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=23.08 E-value=70 Score=24.91 Aligned_cols=45 Identities=9% Similarity=0.033 Sum_probs=29.1
Q ss_pred ceeeccCccceeecCCCCCccchH-HHHhhhccC-CCCCCccCCCCC
Q psy11832 270 KLVEAHGSFHTSHCLTCRKDYSVA-WMKEGNLLG-RMGITLGLHAGG 314 (494)
Q Consensus 270 ~vvE~HGs~~~~~C~~C~~~y~~~-~~~~~i~~~-~~~~p~c~~C~g 314 (494)
..+.+|.+-..-.|..|++.|... .++..+..- ...+-.|+.|+.
T Consensus 18 ~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k 64 (85)
T 2lv2_A 18 GVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPA 64 (85)
T ss_dssp SCCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSC
T ss_pred CCCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCC
Confidence 356677777777899999999754 455554322 223345888875
No 85
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=22.98 E-value=88 Score=33.38 Aligned_cols=44 Identities=16% Similarity=0.244 Sum_probs=30.3
Q ss_pred hHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccccc
Q psy11832 191 VDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVVQP 239 (494)
Q Consensus 191 ~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~h~ 239 (494)
+.++ +|++|++|+.+.-.....|.... +++++|.|+.+|....+
T Consensus 306 ~~~~-~Dlvl~iG~~~~~~~~~~~~~~~----~~~~~i~id~d~~~~~~ 349 (604)
T 2x7j_A 306 RKLR-PDVVIRFGPMPVSKPVFLWLKDD----PTIQQIVIDEDGGWRDP 349 (604)
T ss_dssp HHHC-CSEEEEESSCCSCHHHHHHHHHC----TTSEEEEECTTCCCCCT
T ss_pred hhcC-CCEEEEECCcCccHHHHHHHhhC----CCCeEEEECCCCCccCC
Confidence 3455 89999999988655444444332 36788999988876543
No 86
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=22.19 E-value=56 Score=31.04 Aligned_cols=40 Identities=15% Similarity=0.121 Sum_probs=28.3
Q ss_pred ceeeccCccceeecCCCCCccchHHHHhhhccCCCCCCccCCCCCC
Q psy11832 270 KLVEAHGSFHTSHCLTCRKDYSVAWMKEGNLLGRMGITLGLHAGGL 315 (494)
Q Consensus 270 ~vvE~HGs~~~~~C~~C~~~y~~~~~~~~i~~~~~~~p~c~~C~g~ 315 (494)
-|+.++| ..|..|+...|...+.+- .. ...+..||+||-.
T Consensus 192 avv~v~~----~~C~GC~~~lppq~~~~i-~~-~~~Iv~Cp~CgRI 231 (256)
T 3na7_A 192 SIVTIKK----QACGGCFIRLNDKIYTEV-LT-SGDMITCPYCGRI 231 (256)
T ss_dssp SEEECBT----TBCTTTCCBCCHHHHHHH-HH-SSSCEECTTTCCE
T ss_pred eEEEeeC----CccCCCCeeeCHHHHHHH-HC-CCCEEECCCCCee
Confidence 3677766 489999999998776442 22 2345789999873
No 87
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=21.99 E-value=46 Score=35.27 Aligned_cols=46 Identities=13% Similarity=0.197 Sum_probs=30.5
Q ss_pred HHHhHcCCCCeEEEeCcCCChhhhhhhhhhhhhcCCCceEEEEecccccc
Q psy11832 188 RVDVDFPKADLLLIMGTSLVVQPFCSLVDKVDVDFPKADLLLIMGTSLVV 237 (494)
Q Consensus 188 ~a~~~~~~aDlllvvGTSl~V~pa~~lv~~~~~~~~~a~lv~IN~~p~~~ 237 (494)
.+.+.++++|++|++|+.+.-.+...+.... +..++|.|+.++...
T Consensus 282 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~~----~~~~~i~i~~d~~~~ 327 (565)
T 2nxw_A 282 EITRLVEESDGLFLLGAILSDTNFAVSQRKI----DLRKTIHAFDRAVTL 327 (565)
T ss_dssp HHHHHHHTCSEEEEESCCBCSSTTSBCTTTS----CGGGEEEEETTEEEE
T ss_pred HHHHHHHhCCEEEEECCCccccccccccccC----CCCcEEEEeCCceee
Confidence 3445678899999999987665554443332 345678887766553
No 88
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=21.76 E-value=27 Score=30.65 Aligned_cols=28 Identities=21% Similarity=0.458 Sum_probs=20.4
Q ss_pred CCcCccccCCCCcccchHHHHHHHhhcCCCCCCCCCCe
Q psy11832 132 GSFHTSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGL 169 (494)
Q Consensus 132 G~~~~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~ 169 (494)
|.+.-.+|..|++.+- ...+.||.|++.
T Consensus 43 g~L~~~rC~~CG~~~f----------PPr~~Cp~C~s~ 70 (145)
T 2gnr_A 43 NKIIGSKCSKCGRIFV----------PARSYCEHCFVK 70 (145)
T ss_dssp TCCEEEECTTTCCEEE----------SCCSEETTTTEE
T ss_pred CEEEEEEECCCCcEEe----------CCCCCCCCCCCC
Confidence 4566779999998641 134679999976
No 89
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=21.37 E-value=19 Score=28.53 Aligned_cols=24 Identities=42% Similarity=0.938 Sum_probs=15.3
Q ss_pred ccccCCCCcccchHHHHHHHhhcCCCCCCCCCCee
Q psy11832 136 TSHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGLV 170 (494)
Q Consensus 136 ~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~l 170 (494)
..+|..|+..|.. .+.||.||.+|
T Consensus 18 ~~~C~~C~~~~~~-----------~afCPeCgq~L 41 (81)
T 2jrp_A 18 TAHCETCAKDFSL-----------QALCPDCRQPL 41 (81)
T ss_dssp EEECTTTCCEEEE-----------EEECSSSCSCC
T ss_pred ceECccccccCCC-----------cccCcchhhHH
Confidence 4568888876542 24688887654
No 90
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=20.16 E-value=57 Score=30.85 Aligned_cols=33 Identities=21% Similarity=0.534 Sum_probs=21.5
Q ss_pred cccCCCCcccchHHHHHHHhhcCCCCCCCCCCe
Q psy11832 137 SHCLTCRKDYSVAWMKERIFAEVIPTCEKCNGL 169 (494)
Q Consensus 137 ~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~ 169 (494)
.+|.+|+..+...=+...+.....+.||.|+..
T Consensus 194 ~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 194 QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDY 226 (238)
T ss_dssp EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCB
T ss_pred cccCccChHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 578888887665444433333446899999863
Done!