Query psy11834
Match_columns 230
No_of_seqs 145 out of 1494
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 20:09:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q91_A Uridine diphosphate glu 100.0 1.1E-31 3.7E-36 230.1 16.2 190 18-226 13-215 (218)
2 1g0s_A Hypothetical 23.7 kDa p 100.0 8.7E-30 3E-34 215.6 22.2 180 3-223 15-202 (209)
3 3o6z_A GDP-mannose pyrophospha 100.0 1.8E-28 6E-33 204.6 21.3 181 4-222 5-188 (191)
4 1vhz_A ADP compounds hydrolase 100.0 5.9E-28 2E-32 202.8 20.1 169 3-220 9-180 (198)
5 1mk1_A ADPR pyrophosphatase; n 100.0 3.2E-27 1.1E-31 199.1 20.3 175 4-224 6-182 (207)
6 2dsc_A ADP-sugar pyrophosphata 100.0 1.4E-26 4.8E-31 195.8 21.2 169 4-215 17-204 (212)
7 2yvp_A NDX2, MUTT/nudix family 99.9 7.6E-26 2.6E-30 185.6 19.0 170 1-218 1-172 (182)
8 1v8y_A ADP-ribose pyrophosphat 99.9 2.1E-25 7.2E-30 181.3 18.1 163 4-224 6-169 (170)
9 2w4e_A MUTT/nudix family prote 99.9 1.2E-24 4.2E-29 172.7 13.3 135 43-219 2-136 (145)
10 1sjy_A MUTT/nudix family prote 99.8 7.6E-19 2.6E-23 139.5 16.8 138 46-222 13-152 (159)
11 3shd_A Phosphatase NUDJ; nudix 99.8 1.5E-17 5.2E-22 131.6 16.7 106 108-222 28-134 (153)
12 2fkb_A Putative nudix hydrolas 99.8 6.9E-18 2.4E-22 137.4 14.3 134 46-225 37-171 (180)
13 3i7u_A AP4A hydrolase; nudix p 99.8 6.9E-18 2.4E-22 132.8 11.9 107 46-201 4-114 (134)
14 1q27_A Putative nudix hydrolas 99.8 7.5E-18 2.6E-22 136.1 12.4 132 46-219 34-167 (171)
15 3u53_A BIS(5'-nucleosyl)-tetra 99.7 4.5E-17 1.5E-21 130.0 14.8 90 109-203 36-129 (155)
16 3gg6_A Nudix motif 18, nucleos 99.7 4.5E-18 1.6E-22 135.2 8.9 116 48-206 22-137 (156)
17 2b0v_A Nudix hydrolase; struct 99.7 1.3E-16 4.3E-21 125.8 15.4 106 108-221 32-139 (153)
18 1hzt_A Isopentenyl diphosphate 99.7 2.1E-17 7.3E-22 136.3 11.3 134 46-221 32-172 (190)
19 3gwy_A Putative CTP pyrophosph 99.7 8.2E-17 2.8E-21 125.9 13.5 110 47-199 7-116 (140)
20 3grn_A MUTT related protein; s 99.7 7E-17 2.4E-21 128.1 13.0 111 46-199 8-119 (153)
21 3h95_A Nucleoside diphosphate- 99.7 2.6E-17 8.9E-22 137.2 10.9 123 42-205 22-146 (199)
22 1vcd_A NDX1; nudix protein, di 99.7 1.3E-16 4.6E-21 121.8 13.6 107 47-201 3-109 (126)
23 2jvb_A Protein PSU1, mRNA-deca 99.7 2.3E-17 8E-22 129.5 9.0 118 46-207 4-122 (146)
24 4dyw_A MUTT/nudix family prote 99.7 6.4E-17 2.2E-21 129.6 10.8 110 46-198 29-140 (157)
25 3son_A Hypothetical nudix hydr 99.7 4.6E-16 1.6E-20 122.7 15.4 116 44-202 3-127 (149)
26 1f3y_A Diadenosine 5',5'''-P1, 99.7 1.5E-16 5.2E-21 126.4 12.5 117 46-203 14-149 (165)
27 1ktg_A Diadenosine tetraphosph 99.7 2.2E-16 7.4E-21 122.4 12.7 88 108-201 29-120 (138)
28 3id9_A MUTT/nudix family prote 99.7 1.9E-16 6.5E-21 127.8 12.5 116 47-204 24-140 (171)
29 2rrk_A ORF135, CTP pyrophospho 99.7 1.1E-16 3.6E-21 124.3 10.1 84 108-199 34-117 (140)
30 2pbt_A AP4A hydrolase; nudix p 99.7 1.6E-16 5.6E-21 122.3 11.1 107 46-201 4-114 (134)
31 1rya_A GDP-mannose mannosyl hy 99.7 2.8E-16 9.7E-21 124.7 12.7 112 47-199 19-138 (160)
32 2a6t_A SPAC19A8.12; alpha/beta 99.7 2.3E-17 7.9E-22 145.1 6.6 118 45-205 100-218 (271)
33 3r03_A Nudix hydrolase; struct 99.7 1.9E-16 6.5E-21 123.6 11.1 117 47-205 9-125 (144)
34 3cng_A Nudix hydrolase; struct 99.7 8.7E-16 3E-20 126.9 14.9 124 27-197 18-144 (189)
35 1nqz_A COA pyrophosphatase (MU 99.7 1.3E-16 4.6E-21 131.7 9.8 89 108-200 63-152 (194)
36 2azw_A MUTT/nudix family prote 99.7 2.7E-16 9.2E-21 123.1 11.0 113 44-203 16-134 (148)
37 2o1c_A DATP pyrophosphohydrola 99.7 4.8E-16 1.6E-20 121.5 12.3 113 45-200 8-133 (150)
38 2fvv_A Diphosphoinositol polyp 99.7 8.7E-17 3E-21 134.4 8.3 91 110-206 67-157 (194)
39 3fcm_A Hydrolase, nudix family 99.7 4.4E-16 1.5E-20 129.4 12.4 121 43-206 42-174 (197)
40 3hhj_A Mutator MUTT protein; n 99.7 2.3E-16 7.9E-21 125.7 8.9 113 46-200 29-141 (158)
41 3oga_A Nucleoside triphosphata 99.7 6.4E-16 2.2E-20 124.0 11.5 87 108-199 54-149 (165)
42 3ees_A Probable pyrophosphohyd 99.7 3E-16 1E-20 123.2 9.1 85 107-199 46-130 (153)
43 3exq_A Nudix family hydrolase; 99.6 2.3E-16 8E-21 126.8 8.0 134 46-230 10-145 (161)
44 3eds_A MUTT/nudix family prote 99.6 1.4E-16 4.7E-21 127.0 6.1 109 46-201 21-137 (153)
45 3f6a_A Hydrolase, nudix family 99.6 5.1E-16 1.7E-20 124.0 8.8 108 45-199 5-133 (159)
46 3q1p_A Phosphohydrolase (MUTT/ 99.6 6.9E-16 2.4E-20 129.5 9.7 114 45-206 67-185 (205)
47 2yyh_A MUTT domain, 8-OXO-DGTP 99.6 2.3E-15 7.9E-20 117.3 11.9 79 111-197 39-119 (139)
48 2kdv_A RNA pyrophosphohydrolas 99.6 2.6E-15 8.8E-20 121.6 12.5 113 46-200 8-136 (164)
49 3q93_A 7,8-dihydro-8-oxoguanin 99.6 1.4E-15 4.8E-20 124.5 10.8 84 108-199 49-134 (176)
50 2b06_A MUTT/nudix family prote 99.6 3.7E-15 1.3E-19 118.0 10.8 105 111-229 38-143 (155)
51 1vk6_A NADH pyrophosphatase; 1 99.6 2.1E-15 7.3E-20 132.6 10.0 86 109-202 164-249 (269)
52 1mut_A MUTT, nucleoside tripho 99.6 1.5E-16 5.3E-21 121.5 1.8 85 107-199 29-113 (129)
53 3i9x_A MUTT/nudix family prote 99.6 1.6E-15 5.5E-20 124.8 7.5 89 107-199 65-155 (187)
54 2pqv_A MUTT/nudix family prote 99.6 7.8E-15 2.7E-19 116.2 9.5 86 110-199 40-129 (154)
55 3o8s_A Nudix hydrolase, ADP-ri 99.6 8.7E-15 3E-19 122.9 9.8 91 109-206 91-186 (206)
56 3dup_A MUTT/nudix family prote 99.6 3.3E-14 1.1E-18 127.0 13.9 138 45-221 117-264 (300)
57 3fk9_A Mutator MUTT protein; s 99.6 1.4E-14 4.9E-19 119.9 9.8 86 109-199 26-114 (188)
58 2fml_A MUTT/nudix family prote 99.5 1.4E-14 4.9E-19 127.1 9.8 88 108-200 69-158 (273)
59 1u20_A U8 snoRNA-binding prote 99.5 4.8E-15 1.6E-19 125.3 5.7 89 109-198 66-164 (212)
60 3f13_A Putative nudix hydrolas 99.5 1.2E-13 4E-18 112.2 13.7 72 110-193 38-109 (163)
61 2dho_A Isopentenyl-diphosphate 99.5 6.5E-14 2.2E-18 120.7 12.5 118 45-202 58-193 (235)
62 2fb1_A Conserved hypothetical 99.5 6.1E-15 2.1E-19 126.0 5.8 113 46-200 13-129 (226)
63 1x51_A A/G-specific adenine DN 99.5 2.2E-14 7.7E-19 113.9 8.3 85 107-199 47-133 (155)
64 2qjo_A Bifunctional NMN adenyl 99.5 1.6E-13 5.5E-18 122.0 14.1 112 47-199 204-322 (341)
65 2qjt_B Nicotinamide-nucleotide 99.5 1.1E-13 3.9E-18 123.8 13.1 114 46-199 208-329 (352)
66 3fjy_A Probable MUTT1 protein; 99.5 1.3E-13 4.4E-18 125.0 13.4 93 109-203 49-162 (364)
67 2pny_A Isopentenyl-diphosphate 99.5 9.1E-14 3.1E-18 120.7 11.7 118 45-202 69-204 (246)
68 3qsj_A Nudix hydrolase; struct 99.5 4.3E-13 1.5E-17 115.7 15.6 110 108-220 39-209 (232)
69 1k2e_A Nudix homolog; nudix/MU 99.5 6.6E-14 2.3E-18 111.6 9.3 32 110-141 24-55 (156)
70 3gz5_A MUTT/nudix family prote 99.5 5.7E-14 2E-18 121.1 8.5 85 108-198 50-138 (240)
71 3e57_A Uncharacterized protein 99.4 1.2E-13 4E-18 117.7 6.9 87 109-203 97-192 (211)
72 2xsq_A U8 snoRNA-decapping enz 99.4 2E-13 7E-18 116.2 5.1 89 109-197 75-171 (217)
73 3fsp_A A/G-specific adenine gl 99.3 1.2E-11 4E-16 112.8 8.9 81 107-199 265-345 (369)
74 1q33_A Pyrophosphatase, ADP-ri 99.2 1.2E-10 4E-15 103.3 11.6 90 109-198 150-261 (292)
75 3bho_A Cleavage and polyadenyl 98.7 8.3E-08 2.8E-12 81.1 10.4 59 110-170 84-161 (208)
76 3kvh_A Protein syndesmos; NUDT 98.7 8.3E-09 2.8E-13 86.8 4.1 83 108-193 53-143 (214)
77 3rh7_A Hypothetical oxidoreduc 98.7 7.2E-08 2.5E-12 86.6 9.9 91 111-223 204-295 (321)
78 3t3l_A Frataxin, mitochondrial 27.2 2E+02 0.007 21.7 7.4 45 96-141 71-118 (129)
No 1
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.98 E-value=1.1e-31 Score=230.12 Aligned_cols=190 Identities=30% Similarity=0.523 Sum_probs=127.5
Q ss_pred eeEEEEEEe-ecCeEeecccccceeeEeecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcc-----
Q psy11834 18 IQPYSVKFV-QEALIKENQYCHPQFLITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPE----- 91 (230)
Q Consensus 18 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~----- 91 (230)
+...++++. +||....| +++.++++|+|++++.+++++||+| |||++.+.+.++.
T Consensus 13 ~~~~~~~~~~~~G~~~~~------e~v~~~~aV~vl~~~~~~~~vlLvr-------------Q~R~~~~~~~~~~~~~~~ 73 (218)
T 3q91_A 13 LGTENLYFQSMNGAQKSW------DFMKTHDSVTVLLFNSSRRSLVLVK-------------QFRPAVYAGEVERRFPGS 73 (218)
T ss_dssp ----------------------------CCCEEEEEEEEGGGTEEEEEE-------------EECHHHHHHHTC------
T ss_pred cceeEEEEECCCCCEEEE------EEEEcCCeEEEEEEECCCCEEEEEE-------------cccccccccccccccccc
Confidence 556777877 79998899 9999999999999997789999999 9999986433211
Q ss_pred ----cccCCccccccCCCCCCcEEEeeeeecCC-CCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEE
Q psy11834 92 ----EDRTGSIDVTKYPAELGVTLEFCAGIVDK-NKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFF 166 (230)
Q Consensus 92 ----~~~~~~~~~~~~~~~~~~~~elPgG~VE~-GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~ 166 (230)
..+.-++.-.+||.+.+++|+||||++|+ ||++.+||+||++||||+.+.+..+..++.++++++.++..+++|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~ 153 (218)
T 3q91_A 74 LAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFY 153 (218)
T ss_dssp -------------------CCEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEE
T ss_pred ccccccccccccccccccCCCeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEE
Confidence 01111233446888889999999999999 9999999999999999999876789999999998888899999999
Q ss_pred EEEcCcccccC--CCCCCCceEEEEEEcHHHHHHHhhcCCCCChHHHHHHHHHHHHhhcCCc
Q psy11834 167 VEVTDDMKVNS--GGGVDEELIEVVEMGLEEAREYLAQDEVRSPSGFLFAMHWFLAAKAGQY 226 (230)
Q Consensus 167 a~~~~~~~~~~--~~~~~~E~~~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 226 (230)
+.+.....+.. ...+++|++++.|++++++.+++.+|++..+.+.++|++||+++|.+++
T Consensus 154 a~~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~i~~g~i~~~~~~l~al~W~~~~~~~~~ 215 (218)
T 3q91_A 154 TEVTDAQRSGPGGGLVEEGELIEVVHLPLEGAQAFADDPDIPKTLGVIFGVSWFLSQVAPNL 215 (218)
T ss_dssp EEECGGGBCC---------CCEEEEEEEGGGHHHHHHCTTSCBBHHHHHHHHHHHHHTGGGC
T ss_pred EEECCcccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCccHHHHHHHHHHHhcccccc
Confidence 99765433222 2346889999999999999999999999888888899999999998764
No 2
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.97 E-value=8.7e-30 Score=215.65 Aligned_cols=180 Identities=17% Similarity=0.285 Sum_probs=144.9
Q ss_pred cceEeEEEEeeecCeeeEEEEEEe---ecC---eEeecccccceeeEeecCeEEEEEEEcCCCEEEEEEecCCcCCcccc
Q psy11834 3 KITEAQIIETQSSQFIQPYSVKFV---QEA---LIKENQYCHPQFLITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVK 76 (230)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~---~~g---~~~~~~~~~~~~~~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~ 76 (230)
.++.++...++++ |+++++.+++ ++| ....+ +++.++++|+|++++..++++||+|
T Consensus 15 ~~~~~~~~~v~~g-~~~v~~~~~~~~~~~g~~~~~~~r------~~~~~~~av~vl~~~~~~~~vLLvr----------- 76 (209)
T 1g0s_A 15 DVEIIARETLYRG-FFSLDLYRFRHRLFNGQMSHEVRR------EIFERGHAAVLLPFDPVRDEVVLIE----------- 76 (209)
T ss_dssp GEEEEEEEEEEES-SSEEEEEEEEEBCTTSCBCCCEEE------EEEECCCEEEEEEEETTTTEEEEEE-----------
T ss_pred CcEEEEEEEEEee-eEEEEEEEEEEEcCCCCcceEEEE------EEEeCCCEEEEEEEECCCCEEEEEE-----------
Confidence 3555666777876 9999998886 466 34455 8889999999999986688999999
Q ss_pred ceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCC
Q psy11834 77 FVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVG 156 (230)
Q Consensus 77 ~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~ 156 (230)
|+|++.... ...++.|+||||++|+||++.+||+||++||||+.+ ..+..++.++++++
T Consensus 77 --q~R~~~~~~-----------------~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~--~~~~~l~~~~~~~g 135 (209)
T 1g0s_A 77 --QIRIAAYDT-----------------SETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIV--KRTKPVLSFLASPG 135 (209)
T ss_dssp --EECGGGGGG-----------------SSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCC--CCEEEEEEEESCTT
T ss_pred --eecccCCCC-----------------CCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCccc--CcEEEeEEEecCCC
Confidence 999876210 013689999999999999999999999999999999 88999999999998
Q ss_pred ccCeEEEEEEEEEcCcccccC--CCCCCCceEEEEEEcHHHHHHHhhcCCCCChHHHHHHHHHHHHhhc
Q psy11834 157 SAGDRQTLFFVEVTDDMKVNS--GGGVDEELIEVVEMGLEEAREYLAQDEVRSPSGFLFAMHWFLAAKA 223 (230)
Q Consensus 157 ~s~~~~~~y~a~~~~~~~~~~--~~~~~~E~~~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 223 (230)
.+++.+++|+|...... ... ...+++|.+++.|++++++.+++.+|++.+ +.+++|++|++.+++
T Consensus 136 ~~~~~~~~f~a~~~~~~-~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g~i~d-~~t~~al~~~~~~~~ 202 (209)
T 1g0s_A 136 GTSERSSIMVGEVDATT-ASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDN-AASVIALQWLQLHHQ 202 (209)
T ss_dssp TBCCEEEEEEEECCGGG-CC--------CCSCEEEEEEHHHHHHHHHTTSSCB-HHHHHHHHHHHHHHH
T ss_pred ccCcEEEEEEEEEcccc-ccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCC-HHHHHHHHHHHHhhH
Confidence 88889999999863221 111 123678899999999999999999999997 678999999888754
No 3
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.96 E-value=1.8e-28 Score=204.58 Aligned_cols=181 Identities=22% Similarity=0.410 Sum_probs=140.3
Q ss_pred ceEeEEEEeeecCeeeEEEEEEe---ecCeEeecccccceeeEeecCeEEEEEEEcCCCEEEEEEecCCcCCccccceec
Q psy11834 4 ITEAQIIETQSSQFIQPYSVKFV---QEALIKENQYCHPQFLITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQV 80 (230)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~ 80 (230)
++.++... ..++|+++++.+++ +||..... .++++.++++|+|++++.+++++||+| |+
T Consensus 5 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~----~r~~~~~~~av~v~~~~~~~~~vlLv~-------------~~ 66 (191)
T 3o6z_A 5 ITLIKDKI-LSDNYFTLHNITYDLTRKDGEVIRH----KREVYDRGNGATILLYNTKKKTVVLIR-------------QF 66 (191)
T ss_dssp EEEEEEEE-EECSSSEEEEEEEEEECTTSCEEEE----EEEEEECCCEEEEEEEETTTTEEEEEE-------------EE
T ss_pred eEEeEeEE-EecCcEEEEEEEEEEECCCCCEEEE----EEEEEecCCEEEEEEEECCCCEEEEEE-------------cC
Confidence 44444444 46699999988875 47754221 237889999999999997679999999 99
Q ss_pred ccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCe
Q psy11834 81 LLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGD 160 (230)
Q Consensus 81 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~ 160 (230)
|++.+.+..+ .++.|+||||++| ||++.+||+||++||||+.+ ..+..++.++..++..+.
T Consensus 67 r~~~~~~~~~----------------~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~--~~~~~l~~~~~~~~~~~~ 127 (191)
T 3o6z_A 67 RVATWVNGNE----------------SGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEV--GEVRKLFELYMSPGGVTE 127 (191)
T ss_dssp CHHHHTTTCT----------------TCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCC--SCEEEEEEEESCTTTBCC
T ss_pred CccccccCCC----------------CCeEEEecceEeC-CCCHHHHHHHHHHHHhCCcc--CcEEEEEEEEeCCCccCc
Confidence 9876422110 3688999999999 99999999999999999999 889999999999888888
Q ss_pred EEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q psy11834 161 RQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEVRSPSGFLFAMHWFLAAK 222 (230)
Q Consensus 161 ~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~~ 222 (230)
.+++|++..............++|++++.|++++++.+++.+|++.+ +.++.|++|+..+.
T Consensus 128 ~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g~i~d-~~t~~al~~~~~~~ 188 (191)
T 3o6z_A 128 LIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTGEIRD-GKTVLLLNYLQTSH 188 (191)
T ss_dssp EEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHSSCCB-HHHHHHHHHHHHHS
T ss_pred EEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCC-HHHHHHHHHHHHhC
Confidence 99999999654322221112377899999999999999999999997 78899998887653
No 4
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.96 E-value=5.9e-28 Score=202.83 Aligned_cols=169 Identities=17% Similarity=0.180 Sum_probs=142.6
Q ss_pred cceEeEEEEeeecCeeeEEEEEEe-ecCeEeecccccceeeEe--ecCeEEEEEEEcCCCEEEEEEecCCcCCcccccee
Q psy11834 3 KITEAQIIETQSSQFIQPYSVKFV-QEALIKENQYCHPQFLIT--QHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQ 79 (230)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~--~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q 79 (230)
.++.++...+++++|+++++.+++ ++|....| +++. ++++|+|++++. + ++||+| |
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~------~~~~~~~~~av~vl~~~~-~-~vLLvr-------------q 67 (198)
T 1vhz_A 9 KPTILNVETVARSRLFTVESVDLEFSNGVRRVY------ERMRPTNREAVMIVPIVD-D-HLILIR-------------E 67 (198)
T ss_dssp CCEEEEEEEEEECSSCEEEEEEEECTTSCEEEE------EEECCCCCCEEEEEEEET-T-EEEEEE-------------E
T ss_pred CcEEeeEEEEEECCEEEEEEEEEEcCCCCEEEE------EEEEeCCCCEEEEEEEEC-C-EEEEEE-------------c
Confidence 356778888899999999999998 58988888 6665 678899988874 3 999999 9
Q ss_pred cccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccC
Q psy11834 80 VLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAG 159 (230)
Q Consensus 80 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~ 159 (230)
+|.+. .++.|+||||++|+||++.+||+||++||||+.+ ..+..++.+...++..+
T Consensus 68 ~r~~~----------------------~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~--~~~~~l~~~~~~~~~~~ 123 (198)
T 1vhz_A 68 YAVGT----------------------ESYELGFSKGLIDPGESVYEAANRELKEEVGFGA--NDLTFLKKLSMAPSYFS 123 (198)
T ss_dssp EETTT----------------------TEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEE--EEEEEEEEEECCTTTCC
T ss_pred ccCCC----------------------CCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCc--CceEEEEEEeCCCCccC
Confidence 98765 4678999999999999999999999999999999 78888999888888888
Q ss_pred eEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q psy11834 160 DRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEVRSPSGFLFAMHWFLA 220 (230)
Q Consensus 160 ~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~ 220 (230)
..+++|++..... .....+++|.+++.|++++++.+++.++++.+ +.++.|++|++.
T Consensus 124 ~~~~~f~a~~~~~---~~~~~~~~E~~~~~w~~~~el~~~~~~~~i~~-~~~~~al~~~~~ 180 (198)
T 1vhz_A 124 SKMNIVVAQDLYP---ESLEGDEPEPLPQVRWPLAHMMDLLEDPDFNE-ARNVSALFLVRE 180 (198)
T ss_dssp CEEEEEEEEEEEE---CCCCCCCSSCCCEEEEEGGGGGGGGGCTTTCB-HHHHHHHHHHHH
T ss_pred cEEEEEEEEeCCc---ccCCCCCCceEEEEEEEHHHHHHHHHcCCCCC-HHHHHHHHHHHH
Confidence 8899999985432 12234678889999999999999999999997 678888877654
No 5
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.95 E-value=3.2e-27 Score=199.06 Aligned_cols=175 Identities=13% Similarity=0.079 Sum_probs=138.2
Q ss_pred ceEeEEEEeeecCeeeEEEEEEe-ecCeEeecccccceeeEeecCeEEEEEEEcCCCEEEEEEecCCcCCccccceeccc
Q psy11834 4 ITEAQIIETQSSQFIQPYSVKFV-QEALIKENQYCHPQFLITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLL 82 (230)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~ 82 (230)
++.++...+++++|+++++.+++ ++|....| +++.++++|++++++ .++++||+| |+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~G~~~~~------~~~~~~~av~v~i~~-~~~~vLLvr-------------r~r~ 65 (207)
T 1mk1_A 6 FETISSETLHTGAIFALRRDQVRMPGGGIVTR------EVVEHFGAVAIVAMD-DNGNIPMVY-------------QYRH 65 (207)
T ss_dssp CCEEEEEEEEECSSEEEEEEEEC-----CEEE------EEEEECCEEEEEECC-TTSEEEEEE-------------EEET
T ss_pred cEEEeEEEEEeCCEEEEEEEEEECCCCCEEEE------EEEeCCCEEEEEEEc-CCCEEEEEE-------------eecC
Confidence 56678888899999999999998 58887778 888899999999987 588999999 9887
Q ss_pred ceeccCCcccccCCccccccCCCCCCcEEEeeeeecC-CCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeE
Q psy11834 83 SVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVD-KNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDR 161 (230)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE-~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~ 161 (230)
+. .+..|+||||++| +||++.+||+||++||||+.+ ..+..++.++..++...+.
T Consensus 66 ~~----------------------~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~ 121 (207)
T 1mk1_A 66 TY----------------------GRRLWELPAGLLDVAGEPPHLTAARELREEVGLQA--STWQVLVDLDTAPGFSDES 121 (207)
T ss_dssp TT----------------------TEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEE--EEEEEEEEECSCTTTBCCC
T ss_pred CC----------------------CCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcc--cccEEEEEEEcCCCccccE
Confidence 65 4678999999999 999999999999999999999 7788888887777777667
Q ss_pred EEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCCCChHHHHHHHHHHHHhhcC
Q psy11834 162 QTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEVRSPSGFLFAMHWFLAAKAG 224 (230)
Q Consensus 162 ~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 224 (230)
+++|++....... .....+++|+.++.|++++++.+++..+++.+ +.++.+++|++.+++|
T Consensus 122 ~~~f~~~~~~~~~-~~~~~~~~E~~~~~Wv~~~el~~~~~~~~i~~-~~~~~al~~~~~~~~~ 182 (207)
T 1mk1_A 122 VRVYLATGLREVG-RPEAHHEEADMTMGWYPIAEAARRVLRGEIVN-SIAIAGVLAVHAVTTG 182 (207)
T ss_dssp EEEEEEEEEEECC-C----------CEEEEEHHHHHHHHHTTSCCC-HHHHHHHHHHHHHHTT
T ss_pred EEEEEEEccccCC-CCCCCCCCceEEEEEEEHHHHHHHHHcCCcCC-HHHHHHHHHHHHHhcc
Confidence 8899988543211 11113577899999999999999999999997 6778899888887666
No 6
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.95 E-value=1.4e-26 Score=195.80 Aligned_cols=169 Identities=14% Similarity=0.139 Sum_probs=135.7
Q ss_pred ceEeEEEEeeecCeeeEEEEEEe-ecCeEeecccccceeeEee-------cCeEEEEEEEcCC---CEEEEEEecCCcCC
Q psy11834 4 ITEAQIIETQSSQFIQPYSVKFV-QEALIKENQYCHPQFLITQ-------HKDYYIVMNKITE---AQIIETRSSQFIQP 72 (230)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~-------~~~v~vl~~~~~~---~~vll~r~~~~~~~ 72 (230)
++.++...+++++|+++++.+++ ++|..+.| +++.+ +++|+|+++...+ +++||+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~------~~v~~~~~~~~~~~av~v~~v~~~~~~~~~vlLv~------- 83 (212)
T 2dsc_A 17 QYIISEELISEGKWVKLEKTTYMDPTGKTRTW------ESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVK------- 83 (212)
T ss_dssp CEEEEEEEEEECSSEEEEEEEEECTTSCEEEE------EEEEETTCCTTSCSEEEEEEEEECTTSCCEEEEEE-------
T ss_pred ceEeeEEEEeeCCEEEEEEEEEECCCCCEEEE------EEEEeeccCCCCCCEEEEEEEEeCCCCCcEEEEEE-------
Confidence 56677778899999999999998 69998999 77765 7899888765432 4899999
Q ss_pred ccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEE
Q psy11834 73 YSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFR 152 (230)
Q Consensus 73 ~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~ 152 (230)
|+|++. .++.|+||||++|+||++.+||+||++||||+.+ ..+..++.++
T Consensus 84 ------q~R~~~----------------------~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~--~~~~~l~~~~ 133 (212)
T 2dsc_A 84 ------QFRPPM----------------------GGYCIEFPAGLIDDGETPEAAALRELEEETGYKG--DIAECSPAVC 133 (212)
T ss_dssp ------EEEGGG----------------------TEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCC--EEEEECCCEE
T ss_pred ------eecCCC----------------------CCcEEECCccccCCCCCHHHHHHHHHHHHhCCCc--cceEEeccEE
Confidence 999875 4678999999999999999999999999999998 6677666778
Q ss_pred cCCCccCeEEEEEEEEEcCcccc---cCCCCCCCceEEEEEEcHHHHHHHhh-----cCCCCChHHHHHHH
Q psy11834 153 SGVGSAGDRQTLFFVEVTDDMKV---NSGGGVDEELIEVVEMGLEEAREYLA-----QDEVRSPSGFLFAM 215 (230)
Q Consensus 153 ~~~~~s~~~~~~y~a~~~~~~~~---~~~~~~~~E~~~v~wv~~eE~~~~~~-----~~~~~~~~~~~~a~ 215 (230)
..++.++..+++|++.+...... .....+++|.+++.|++++++.+++. +|.+.++....+++
T Consensus 134 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~g~i~~a~~~~~a~ 204 (212)
T 2dsc_A 134 MDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDALVAEEHLTVDARVYSYAL 204 (212)
T ss_dssp SCTTTBCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHHHHHHHHCCEEBHHHHHHHH
T ss_pred cCCCccCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHHhccccCCEEEEHHHHHHHH
Confidence 88888888899999886532211 12234678999999999999999998 78877644333333
No 7
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.94 E-value=7.6e-26 Score=185.57 Aligned_cols=170 Identities=18% Similarity=0.173 Sum_probs=138.4
Q ss_pred CCcceEeEEEEeeecCeeeEEEEEEe-ecCeE-eecccccceeeEeecCeEEEEEEEcCCCEEEEEEecCCcCCccccce
Q psy11834 1 MNKITEAQIIETQSSQFIQPYSVKFV-QEALI-KENQYCHPQFLITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFV 78 (230)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~ 78 (230)
|+.++.++...+++++ +++++.+++ ++|.. ..| +++.+++++++++++ .++++||+|
T Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~------~~~~~~~~v~v~i~~-~~~~vLL~~------------- 59 (182)
T 2yvp_A 1 MSPWERILLEEILSEP-VRLVKERVRTHTGRELTYV------YRPGPVAASFVLPVT-ERGTALLVR------------- 59 (182)
T ss_dssp CCSSEEEEEEEEECSS-SCEEEEEEECTTSCEEEEE------EBCSSCEEEEEEEBC-TTSEEEEEE-------------
T ss_pred CCCceEeeeEEEEeCc-EEEEEEEEECCCCCEeeEE------EEEecCCEEEEEEEc-CCCEEEEEE-------------
Confidence 4667888888889999 999999988 58876 677 778888899998887 478999999
Q ss_pred ecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCcc
Q psy11834 79 QVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSA 158 (230)
Q Consensus 79 q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s 158 (230)
++|.+. .+..|+||||++|+||++.+||+||++||||+.+ ..+..++.+++.++..
T Consensus 60 r~~~~~----------------------~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~ 115 (182)
T 2yvp_A 60 QYRHPT----------------------GKFLLEVPAGKVDEGETPEAAARRELREEVGAEA--ETLIPLPSFHPQPSFT 115 (182)
T ss_dssp EEEGGG----------------------TEEEEECCEEECCTTCCHHHHHHHHHHHHHCEEC--SCEEECCCBCSCTTTB
T ss_pred eccCCC----------------------CCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCc--ccEEEEEEEeCCCCcc
Confidence 887654 4578999999999999999999999999999999 7888888777776666
Q ss_pred CeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCCCChHHHHHHHHHH
Q psy11834 159 GDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEVRSPSGFLFAMHWF 218 (230)
Q Consensus 159 ~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~ 218 (230)
+..+++|++..... ......+++|..++.|++++++.+++..+.+.+ +.++.|+.++
T Consensus 116 ~~~~~~f~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~-~~~~~al~~~ 172 (182)
T 2yvp_A 116 AVVFHPFLALKARV--VTPPTLEEGELLESLELPLTEVYALLAKGEIQD-ASTALTLFYA 172 (182)
T ss_dssp CCEEEEEEECSCEE--CSCCCCCTTCCEEEEEEEHHHHHHHHHTTCCCC-HHHHHHHHHH
T ss_pred ccEEEEEEEecccc--CCCCCCCCCceEEEEEEEHHHHHHHHHcCCcCC-hHHHHHHHHH
Confidence 77888888873211 112223678899999999999999999999987 5667776543
No 8
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.94 E-value=2.1e-25 Score=181.30 Aligned_cols=163 Identities=21% Similarity=0.229 Sum_probs=126.6
Q ss_pred ceEeEEEEeeecCeeeEEEEEEeecCeEeecccccceeeEeecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccc
Q psy11834 4 ITEAQIIETQSSQFIQPYSVKFVQEALIKENQYCHPQFLITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLS 83 (230)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~ 83 (230)
++.++...+++++|+++++. ..| +++.++++|++++++ ++++||+| |+|.+
T Consensus 6 ~~~~~~~~~~~~~~~~v~~~--------~~~------~~~~~~~~v~vii~~--~~~vLL~~-------------~~r~~ 56 (170)
T 1v8y_A 6 YGGVERTYLYRGRILNLALE--------GRY------EIVEHKPAVAVIALR--EGRMLFVR-------------QMRPA 56 (170)
T ss_dssp -----CEEEEECSSEEEEEE--------TTE------EEEEECCEEEEEEEE--TTEEEEEE-------------CCBTT
T ss_pred eEEEeEEEEEECCeEEEEEE--------eeE------EEEecCCeEEEEEEE--CCEEEEEE-------------EEeCC
Confidence 55667778899999999887 334 778888899999988 78999999 88876
Q ss_pred eeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEE
Q psy11834 84 VYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQT 163 (230)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~ 163 (230)
. .+..|++|||++|+||++.+||+||++||||+ + ..+..++.++..++..+...+
T Consensus 57 ~----------------------~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~--~~~~~l~~~~~~~~~~~~~~~ 111 (170)
T 1v8y_A 57 V----------------------GLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-S--GDLTYLFSYFVSPGFTDEKTH 111 (170)
T ss_dssp T----------------------TBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-E--EEEEEEEEEESCTTTBCCEEE
T ss_pred C----------------------CCCEEECCccccCCCCCHHHHHHHHHHHHHCC-C--cCceeeEEEecCCCccccEEE
Confidence 4 34678999999999999999999999999999 7 888888888877777777888
Q ss_pred EEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCCC-ChHHHHHHHHHHHHhhcC
Q psy11834 164 LFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEVR-SPSGFLFAMHWFLAAKAG 224 (230)
Q Consensus 164 ~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~ 224 (230)
+|++..... .....+++|..++.|++++++.+++.++.+. + +.+++|+.+++..+++
T Consensus 112 ~f~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~-~~~~~al~~~~~~~~~ 169 (170)
T 1v8y_A 112 VFLAENLKE---VEAHPDEDEAIEVVWMRPEEALERHQRGEVEFS-ATGLVGVLYYHAFLRG 169 (170)
T ss_dssp EEEEEEEEE---CC--------CEEEEECHHHHHHHHHTTSCCBC-HHHHHHHHHHHHHCC-
T ss_pred EEEEEeccc---cCCCCCCCceEEEEEEEHHHHHHHHHCCCEecC-HHHHHHHHHHHHHhhc
Confidence 999885422 1122356788899999999999999999998 6 6889999888877653
No 9
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.92 E-value=1.2e-24 Score=172.69 Aligned_cols=135 Identities=19% Similarity=0.166 Sum_probs=105.2
Q ss_pred EeecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCC
Q psy11834 43 ITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNK 122 (230)
Q Consensus 43 ~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GE 122 (230)
+.++++|++++++ .++++||++ |+|.+. .++.|+||||++|+||
T Consensus 2 ~~~~~~v~vi~~~-~~~~vLLv~-------------~~r~~~----------------------~~~~w~~PgG~ve~gE 45 (145)
T 2w4e_A 2 PRGPRAVFILPVT-AQGEAVLIR-------------QFRYPL----------------------RATITEIVAGGVEKGE 45 (145)
T ss_dssp CCCCEEEEEEEEE-TTSEEEEEE-------------EEETTT----------------------TEEEEECEEEECCTTC
T ss_pred eeeCCEEEEEEEc-CCCEEEEEE-------------EEecCC----------------------CCCEEEeCCccCCCCC
Confidence 4567889999988 478999999 888754 3568999999999999
Q ss_pred CHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhc
Q psy11834 123 SLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQ 202 (230)
Q Consensus 123 s~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~ 202 (230)
|+.+||+||++||||+.+ ..+..++.++..++..+..+++|++..... +....+++|..++.|++++++.+++.+
T Consensus 46 t~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~~E~~~~~w~~~~el~~~~~~ 120 (145)
T 2w4e_A 46 DLGAAAARELLEEVGGAA--SEWVPLPGFYPQPSISGVVFYPLLALGVTL---GAAQLEDTETIERVVLPLAEVYRMLEA 120 (145)
T ss_dssp CHHHHHHHHHHHHHCEEC--SEEEECCCBBSCTTTCCCEEEEEEEEEEEE---C--------CEEEEEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCcc--CeEEEEecCcCCCCccCceEEEEEEEeccc---CCCCCCCCCeEEEEEEeHHHHHHHHHc
Confidence 999999999999999998 778888777777666677888898874321 122236778999999999999999999
Q ss_pred CCCCChHHHHHHHHHHH
Q psy11834 203 DEVRSPSGFLFAMHWFL 219 (230)
Q Consensus 203 ~~~~~~~~~~~a~~~~~ 219 (230)
+++.+ +.++.|+.++.
T Consensus 121 ~~~~~-~~~~~a~~~~~ 136 (145)
T 2w4e_A 121 GEIQD-GPSSLTLWQAR 136 (145)
T ss_dssp TCCCB-HHHHHHHHHHH
T ss_pred CCcCc-HHHHHHHHHHH
Confidence 99987 56777775444
No 10
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.81 E-value=7.6e-19 Score=139.49 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=98.7
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+.++++++++ .++++||+| +.+.+.. ...+..|+||||++|+||++.
T Consensus 13 ~~~~~~vi~~-~~~~vLl~~-------------r~~~~~~-------------------~~~~~~w~~PgG~ve~gE~~~ 59 (159)
T 1sjy_A 13 LRAAGVVLLN-ERGDILLVQ-------------EKGIPGH-------------------PEKAGLWHIPSGAVEDGENPQ 59 (159)
T ss_dssp EEEEEEEEBC-TTCCEEEEE-------------ESCC-----------------------CCCCCEECSEEECCTTSCHH
T ss_pred EEeEEEEEEe-CCCCEEEEE-------------ecccCcC-------------------CCCCCeEECCccccCCCCCHH
Confidence 4567777776 478999999 7652110 003467899999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEEEcC-CCccCeEEEEEEEEEcCcccccCCCC-CCCceEEEEEEcHHHHHHHhhcC
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTFRSG-VGSAGDRQTLFFVEVTDDMKVNSGGG-VDEELIEVVEMGLEEAREYLAQD 203 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~~~~-~~~s~~~~~~y~a~~~~~~~~~~~~~-~~~E~~~v~wv~~eE~~~~~~~~ 203 (230)
+||+||++||||+.+ ..+..++.+... +.......++|.+....... ... +++|+.++.|++++++.+++..+
T Consensus 60 ~aa~RE~~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~~f~~~~~~~~~---~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 60 DAAVREACEETGLRV--RPVKFLGAYLGRFPDGVLILRHVWLAEPEPGQT---LAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp HHHHHHHHHHHSCCE--EEEEEEEEEEEECTTSCEEEEEEEEEEECSSCC---CCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCccc--eeeEEEEEEecccCCCceEEEEEEEEEccCCCc---cccCCCCceeEEEEecHHHHHHhhhcc
Confidence 999999999999999 666666654432 11144567888888643210 222 56789999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHhh
Q psy11834 204 EVRSPSGFLFAMHWFLAAK 222 (230)
Q Consensus 204 ~~~~~~~~~~a~~~~~~~~ 222 (230)
.++.. .+..++..+++++
T Consensus 135 ~~~~~-~~~~~~~~~~~~~ 152 (159)
T 1sjy_A 135 QIRMY-QTKLFYADALREK 152 (159)
T ss_dssp CBSCT-HHHHHHHHHHHHH
T ss_pred cchhh-hhHHHHHHHHhcC
Confidence 99874 4455555555443
No 11
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.77 E-value=1.5e-17 Score=131.57 Aligned_cols=106 Identities=19% Similarity=0.183 Sum_probs=74.4
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEE-EcCCCccCeEEEEEEEEEcCcccccCCCCCCCceE
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTF-RSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELI 186 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~-~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~ 186 (230)
+..|++|||++|+|||+.+||+||++||||+.+ .....++.+ +..++......++|.+...... ....++.|+.
T Consensus 28 ~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~~~~E~~ 102 (153)
T 3shd_A 28 KALWNQPAGHLEADETLVEAAARELWEETGISA--QPQHFIRMHQWIAPDKTPFLRFLFAIELEQIC---PTQPHDSDID 102 (153)
T ss_dssp EEEEECSEEECCTTCCHHHHHHHHHHHHHCCCC--CCCEEEEEEEECCTTSCCEEEEEEEEECSSCC---CCCCCSTTCC
T ss_pred CCCEECCeEEeCCCCCHHHHHHHHHHHHHCccc--ccCcEEEEEEEecCCCceEEEEEEEEEccccC---cCCCCcccce
Confidence 467999999999999999999999999999999 555555554 3444455556678888765321 1233577889
Q ss_pred EEEEEcHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q psy11834 187 EVVEMGLEEAREYLAQDEVRSPSGFLFAMHWFLAAK 222 (230)
Q Consensus 187 ~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~~ 222 (230)
++.|++++++ ........| ...-++..+++.+
T Consensus 103 ~~~W~~~~el---~~~~~~~~~-~~~~~l~~~~~~~ 134 (153)
T 3shd_A 103 CCRWVSAEEI---LQASNLRSP-LVAESIRCYQSGQ 134 (153)
T ss_dssp EEEEECHHHH---HTCSCBSST-HHHHHHHHHHHTC
T ss_pred eeEEecHHHh---hccccccCc-hHHHHHHHHHhCC
Confidence 9999999999 333344443 3345555555543
No 12
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.77 E-value=6.9e-18 Score=137.36 Aligned_cols=134 Identities=22% Similarity=0.200 Sum_probs=95.2
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEe-eeeecCCCCCH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEF-CAGIVDKNKSL 124 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el-PgG~VE~GEs~ 124 (230)
+.++++++++ .++++||.+ +..... ..+..|+| |||++++||++
T Consensus 37 ~~~~~v~i~~-~~~~vLl~~-------------R~~~~~---------------------~~~g~w~l~pGG~ve~gE~~ 81 (180)
T 2fkb_A 37 HRATYIVVHD-GMGKILVQR-------------RTETKD---------------------FLPGMLDATAGGVVQADEQL 81 (180)
T ss_dssp EEEEEEEEEC-SSSCEEEEE-------------ECSSCS---------------------SSTTCEESSBCCBCBTTCCH
T ss_pred eeEEEEEEEC-CCCEEEEEE-------------CCCCCc---------------------cCCCcEEeecCCCCCCCCCH
Confidence 4577888877 467888877 322111 02456999 99999999999
Q ss_pred HHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCC
Q psy11834 125 AEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDE 204 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~ 204 (230)
.+||+||++||||+.+ ..+..++.+....+......++|++... .....++.|+.++.|++++++.+++. .
T Consensus 82 ~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~f~~~~~-----~~~~~~~~E~~~~~W~~~~el~~~~~--~ 152 (180)
T 2fkb_A 82 LESARREAEEELGIAG--VPFAEHGQFYFEDKNCRVWGALFSCVSH-----GPFALQEDEVSEVCWLTPEEITARCD--E 152 (180)
T ss_dssp HHHHHHHHHHHHCCBS--CCCEEEEEEEEEETTEEEEEEEEEEECC-----CCCCCCTTTEEEEEEECHHHHHTTGG--G
T ss_pred HHHHHHHHHHHHCCCc--cceEEEEEEEecCCCceEEEEEEEEecC-----CCcCCChhHhheEEEecHHHHHHHHH--H
Confidence 9999999999999988 6777777766555555556778887732 12223578899999999999999876 4
Q ss_pred CCChHHHHHHHHHHHHhhcCC
Q psy11834 205 VRSPSGFLFAMHWFLAAKAGQ 225 (230)
Q Consensus 205 ~~~~~~~~~a~~~~~~~~~~~ 225 (230)
+. +.+..++..+++.....
T Consensus 153 ~~--~~~~~~l~~~~~~~~~~ 171 (180)
T 2fkb_A 153 FT--PDSLKALALWMKRNAKN 171 (180)
T ss_dssp BC--HHHHHHHHHHHHHC---
T ss_pred hC--CcHHHHHHHHHHhhcCC
Confidence 43 45566676666655443
No 13
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.75 E-value=6.9e-18 Score=132.82 Aligned_cols=107 Identities=18% Similarity=0.168 Sum_probs=76.1
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+-++++|+++ ++++||+| +. ...|+||||++|+|||+.
T Consensus 4 ~~aag~vv~~--~~~vLL~~-------------r~---------------------------~g~W~~PgG~ve~gEt~~ 41 (134)
T 3i7u_A 4 EFSAGGVLFK--DGEVLLIK-------------TP---------------------------SNVWSFPKGNIEPGEKPE 41 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEE-------------CT---------------------------TSCEECCEEECCTTCCHH
T ss_pred EEEEEEEEEE--CCEEEEEE-------------eC---------------------------CCcEECCeeEecCCCCHH
Confidence 4467777776 68999999 31 134889999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEE---EcCCCc-cCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhh
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTF---RSGVGS-AGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLA 201 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~---~~~~~~-s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~ 201 (230)
+||+||++||||+.+ ..+..++.+ +...+. ....+++|++...... . ..+.|+.++.|++++++.+++.
T Consensus 42 ~aa~RE~~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~----~-~~~~E~~~~~W~~~~e~~~~l~ 114 (134)
T 3i7u_A 42 ETAVREVWEETGVKG--EILDYIGEIHYWYTLKGERIFKTVKYYLMKYKEGE----P-RPSWEVKDAKFFPIKEAKKLLK 114 (134)
T ss_dssp HHHHHHHHHHHSEEE--EEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEC----C-CCCTTSSEEEEEEHHHHHHHBC
T ss_pred HHHHHHHHHhcCceE--EEeeeeeeeeEEecCCCceEEEEEEEEEEEEcCCc----C-cCChhheEEEEEEHHHHhhhcC
Confidence 999999999999998 555555532 222222 1223466777754321 1 1245788999999999999864
No 14
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.75 E-value=7.5e-18 Score=136.07 Aligned_cols=132 Identities=11% Similarity=0.044 Sum_probs=94.9
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEE-eeeeecCCCCCH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLE-FCAGIVDKNKSL 124 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-lPgG~VE~GEs~ 124 (230)
+.++++++++. ++++||+| +..... ..+..|+ +|||++++||++
T Consensus 34 ~~~v~v~i~~~-~~~vLl~~-------------r~~~~~---------------------~~~g~w~~~PgG~ve~gEs~ 78 (171)
T 1q27_A 34 VRVVNAFLRNS-QGQLWIPR-------------RSPSKS---------------------LFPNALDVSVGGAVQSGETY 78 (171)
T ss_dssp CEEEEEEEEET-TTEEEECC-------------SCCSSS---------------------CCCCSCCCSEEEECSSSSCH
T ss_pred ceEEEEEEECC-CCeEEEEE-------------ecCCCC---------------------CCCCccccccCccccCCCCH
Confidence 66788888874 78999987 321111 1246788 999999999999
Q ss_pred HHHHHHHHHhhhCCccCCCceEEEEEEE-cCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcC
Q psy11834 125 AEIAREEVLEECGYDVPVEKLEKIQTFR-SGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQD 203 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l~~l~~~~-~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~ 203 (230)
.+||+||++||||+.+....+..++.+. .... .....++|.+... . ....++.|..++.|++++++.+++...
T Consensus 79 ~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~-~~~~~~~f~~~~~-~----~~~~~~~E~~~~~W~~~~el~~~~~~~ 152 (171)
T 1q27_A 79 EEAFRREAREELNVEIDALSWRPLASFSPFQTT-LSSFMCVYELRSD-A----TPIFNPNDISGGEWLTPEHLLARIAAG 152 (171)
T ss_dssp HHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSC-CSSEEEEEEEECC-C----CCCSCTTTCSCCEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcccccceEEEEEEeccCCC-CccEEEEEEEEEC-C----ccccCchhhheEEEecHHHHHHHHhcC
Confidence 9999999999999999655578888776 3322 2237778888752 1 122345678889999999999998887
Q ss_pred CCCChHHHHHHHHHHH
Q psy11834 204 EVRSPSGFLFAMHWFL 219 (230)
Q Consensus 204 ~~~~~~~~~~a~~~~~ 219 (230)
.... ..++-++..++
T Consensus 153 ~~~~-~~~~~~l~~~~ 167 (171)
T 1q27_A 153 EAAK-GDLAELVRRCY 167 (171)
T ss_dssp SSCC-HHHHHHHHHHH
T ss_pred CCCc-hhHHHHHHHHH
Confidence 7765 45455554443
No 15
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.74 E-value=4.5e-17 Score=130.03 Aligned_cols=90 Identities=22% Similarity=0.168 Sum_probs=63.2
Q ss_pred cEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEE----cCCCccCeEEEEEEEEEcCcccccCCCCCCCc
Q psy11834 109 VTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFR----SGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEE 184 (230)
Q Consensus 109 ~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~----~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E 184 (230)
..|.||||++|+|||+.+||.||++||||+.+ .....+..+. ...........+|++...... .....++|
T Consensus 36 ~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~E 110 (155)
T 3u53_A 36 HHWTPPKGHVEPGEDDLETALRETQEEAGIEA--GQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYD---VEIRLSHE 110 (155)
T ss_dssp CCEECSEEECCSSCCHHHHHHHHHHHHHCCCG--GGEEEEEEEEEEEEEEETTEEEEEEEEEEEESCTT---CCCCCCTT
T ss_pred CCEECCeeeccCCCCHHHHHHHHHHHHHCCcc--ccceeeeeEeeeeecCCCcceeEEEEEEEEEeccC---CccCCCcc
Confidence 45899999999999999999999999999998 5554443321 112223334556666654321 11124568
Q ss_pred eEEEEEEcHHHHHHHhhcC
Q psy11834 185 LIEVVEMGLEEAREYLAQD 203 (230)
Q Consensus 185 ~~~v~wv~~eE~~~~~~~~ 203 (230)
+.++.|++++|+.+++...
T Consensus 111 ~~~~~W~~~~ea~~~~~~~ 129 (155)
T 3u53_A 111 HQAYRWLGLEEACQLAQFK 129 (155)
T ss_dssp EEEEEEECHHHHHHHHCSH
T ss_pred eeEEEEeEHHHHHHHcCCH
Confidence 9999999999999987643
No 16
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.74 E-value=4.5e-18 Score=135.22 Aligned_cols=116 Identities=14% Similarity=0.132 Sum_probs=86.6
Q ss_pred eEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHHH
Q psy11834 48 DYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAEI 127 (230)
Q Consensus 48 ~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~eA 127 (230)
.+++++++ .++++||+| +.+.+ ....|+||||++|+||++.+|
T Consensus 22 ~v~~~i~~-~~~~vLl~~-------------r~~~~-----------------------~~~~w~~PgG~ve~gE~~~~a 64 (156)
T 3gg6_A 22 VVLAVFLS-EQDEVLLIQ-------------EAKRE-----------------------CRGSWYLPAGRMEPGETIVEA 64 (156)
T ss_dssp EEEEECBC-TTSEEEEEE-------------CCCTT-----------------------STTCEECSEEECCTTCCHHHH
T ss_pred EEEEEEEe-CCCEEEEEE-------------ecCCC-----------------------CCCEEECCeeeccCCCCHHHH
Confidence 44555555 478999999 65433 245789999999999999999
Q ss_pred HHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCCC
Q psy11834 128 AREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEVR 206 (230)
Q Consensus 128 A~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~~ 206 (230)
|+||++||||+.+ .....++.+.... ....++|++....... .....+++|+.++.|++++++.+++..+.+.
T Consensus 65 a~REl~EEtGl~~--~~~~~~~~~~~~~---~~~~~~f~~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~ 137 (156)
T 3gg6_A 65 LQREVKEEAGLHC--EPETLLSVEERGP---SWVRFVFLARPTGGIL-KTSKEADAESLQAAWYPRTSLPTPLRAHDIL 137 (156)
T ss_dssp HHHHHHHHHCEEE--EEEEEEEEEESST---TEEEEEEEEEEEEECC-CCGGGCSSSCSEEEEEETTSCCSSBSCTHHH
T ss_pred HHHHHHHhhCcee--EeeeEEEEEcCCC---CEEEEEEEEEeeCCee-ccCCCCCcceeeeEEEcHHHCcccccchhHH
Confidence 9999999999999 7777777666532 3456788887643321 1112256788999999999999988877765
No 17
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.73 E-value=1.3e-16 Score=125.83 Aligned_cols=106 Identities=16% Similarity=0.149 Sum_probs=71.1
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEE-EcCCC-ccCeEEEEEEEEEcCcccccCCCCCCCce
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTF-RSGVG-SAGDRQTLFFVEVTDDMKVNSGGGVDEEL 185 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~-~~~~~-~s~~~~~~y~a~~~~~~~~~~~~~~~~E~ 185 (230)
+..|+||||++++||++.+||+||++||||+.+ .....++.+ +..++ ......++|.+...... .....+.|+
T Consensus 32 ~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~~~~e~ 106 (153)
T 2b0v_A 32 AIKLNQPAGHLEPGESIIQACSREVLEETGHSF--LPEVLTGIYHWTCASNGTTYLRFTFSGQVVSFD---PDRKLDTGI 106 (153)
T ss_dssp CCEEECSEEECCTTSCHHHHHHHHHHHHHSEEE--EEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEC---TTSCCCTTE
T ss_pred CCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEe--ccceEEEEEEEeCCCCCcEEEEEEEEEEeCCCC---CCCCCCCCe
Confidence 457999999999999999999999999999999 555555543 22222 22234456777754321 112346788
Q ss_pred EEEEEEcHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q psy11834 186 IEVVEMGLEEAREYLAQDEVRSPSGFLFAMHWFLAA 221 (230)
Q Consensus 186 ~~v~wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~ 221 (230)
.++.|++++++.++. ..... +...-++..+++.
T Consensus 107 ~~~~W~~~~el~~~~--~~~~~-~~~~~~l~~~~~~ 139 (153)
T 2b0v_A 107 VRAAWFSIDEIRAKQ--AMHRT-PLVMQCIEDYHAG 139 (153)
T ss_dssp EEEEEEEHHHHHHTG--GGBSS-THHHHHHHHHHTT
T ss_pred eeEEEecHHHHhhhh--cccCc-HHHHHHHHHHHhC
Confidence 999999999999972 22222 3344455555543
No 18
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.73 E-value=2.1e-17 Score=136.27 Aligned_cols=134 Identities=13% Similarity=0.071 Sum_probs=90.9
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEe-eeeecCCCCCH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEF-CAGIVDKNKSL 124 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el-PgG~VE~GEs~ 124 (230)
+.+|++++++ .++++||+| +..... ..+..|++ |||++++||++
T Consensus 32 ~~~v~~~i~~-~~g~vLl~~-------------R~~~~~---------------------~~~g~w~~~PgG~ve~gEt~ 76 (190)
T 1hzt_A 32 HLAFSSWLFN-AKGQLLVTR-------------RALSKK---------------------AWPGVWTNSVCGHPQLGESN 76 (190)
T ss_dssp EECEEEEEEC-TTCCEEEEE-------------ECTTCS---------------------SSTTCEEESEEECCCTTCCH
T ss_pred EEEEEEEEEc-CCCEEEEEE-------------eCCCCC---------------------CCCCcccCcccccCCCCCCH
Confidence 3478888887 478899988 432111 02467999 99999999999
Q ss_pred HHHHHHHHHhhhCCccCCCce-EEEEEEEc---CC-Cc-cCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHH
Q psy11834 125 AEIAREEVLEECGYDVPVEKL-EKIQTFRS---GV-GS-AGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEARE 198 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l-~~l~~~~~---~~-~~-s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~ 198 (230)
.+||+||++||||+.+ ..+ ..++.+.. .+ +. .....++|++.... ....+++|+.++.|++++++.+
T Consensus 77 ~~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-----~~~~~~~E~~~~~W~~~~el~~ 149 (190)
T 1hzt_A 77 EDAVIRRCRYELGVEI--TPPESIYPDFRYRATDPSGIVENEVCPVFAARTTS-----ALQINDDEVMDYQWCDLADVLH 149 (190)
T ss_dssp HHHHHHHHHHHHCCCB--SCCEEEETTCEEEEECTTSCEEEEECCEEEEEBCS-----CCCCCTTTEEEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHCCCc--hhhheeeeeEEEEeeCCCCCcceEEEEEEEEecCC-----CCcCCccceeeEEEecHHHHHH
Confidence 9999999999999999 555 44433211 11 11 23445677777432 1223567899999999999999
Q ss_pred HhhcCCCCChHHHHHHHHHHHHh
Q psy11834 199 YLAQDEVRSPSGFLFAMHWFLAA 221 (230)
Q Consensus 199 ~~~~~~~~~~~~~~~a~~~~~~~ 221 (230)
++..+...-.+.+..++..+++.
T Consensus 150 ~~~~~~~~~~p~~~~~~~~~~~~ 172 (190)
T 1hzt_A 150 GIDATPWAFSPWMVMQATNREAR 172 (190)
T ss_dssp HHHHCGGGBCHHHHHHHHSHHHH
T ss_pred HHHcChhhcCchHHHHHHHHHHH
Confidence 99988732224445555444443
No 19
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.72 E-value=8.2e-17 Score=125.92 Aligned_cols=110 Identities=19% Similarity=0.141 Sum_probs=79.8
Q ss_pred CeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHH
Q psy11834 47 KDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAE 126 (230)
Q Consensus 47 ~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~e 126 (230)
..+++++.+ ++++||+| +.+.+.. ..+..|+||||++++||++.+
T Consensus 7 ~~v~~vi~~--~~~vLL~~-------------r~~~~~~--------------------~~~g~w~lPgG~ve~gE~~~~ 51 (140)
T 3gwy_A 7 EVVAAVIRL--GEKYLCVQ-------------RGQTKFS--------------------YTSFRYEFPGGKVEEGESLQE 51 (140)
T ss_dssp EEEEEEEEE--TTEEEEEE-------------C-----------------------------CCEECSEEECCTTCCHHH
T ss_pred EEEEEEEEe--CCEEEEEE-------------ecCCCCC--------------------CCCCeEECCCccCCCCCCHHH
Confidence 345666665 78999999 5544320 024568999999999999999
Q ss_pred HHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHH
Q psy11834 127 IAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREY 199 (230)
Q Consensus 127 AA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~ 199 (230)
||.||++||||+.+ .....++.+...........++|.+..... .....|..++.|++++++.++
T Consensus 52 aa~REl~EE~Gl~~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~------~~~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 52 ALQREIMEEMDYVI--EVGEKLLTVHHTYPDFEITMHAFLCHPVGQ------RYVLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp HHHHHHHHHHCCCE--EEEEEEEEEECCCSSCCEEEEEEEEEECCS------CCCCCSSCEEEEECHHHHTTS
T ss_pred HHHHHHHHhhCcEE--EeceEEEEEEEEeCCceEEEEEEEEEecCC------cccccccceeEeccHHHHhhC
Confidence 99999999999999 777777766555445566778888886532 223467889999999999875
No 20
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.72 E-value=7e-17 Score=128.12 Aligned_cols=111 Identities=16% Similarity=0.073 Sum_probs=79.6
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceeccc-ceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLL-SVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSL 124 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~ 124 (230)
+.+|++++++ .++++||++ +.+. +. .+..|+||||++++||++
T Consensus 8 ~~~v~~vi~~-~~~~vLL~~-------------r~~~~~~----------------------~~g~w~~PgG~ve~gE~~ 51 (153)
T 3grn_A 8 IISVYALIRN-EKGEFLLLR-------------RSENSRT----------------------NAGKWDLPGGKVNPDESL 51 (153)
T ss_dssp EEEEEEEEEC-TTCCEEEEE-------------ECTTCSS----------------------STTCEECSEEECCTTCCH
T ss_pred EEEEEEEEEc-CCCcEEEEE-------------EcCCCCC----------------------CCCeEECceeecCCCCCH
Confidence 3466777776 478999998 5543 22 356799999999999999
Q ss_pred HHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHH
Q psy11834 125 AEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREY 199 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~ 199 (230)
.+||+||++||||+.+ .....++.+...........++|++...... .....|..++.|++++++.++
T Consensus 52 ~~aa~REl~EE~Gl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 52 KEGVAREVWEETGITM--VPGDIAGQVNFELTEKKVIAIVFDGGYVVAD-----VKLSYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp HHHHHHHHHHHHCCCC--CCCSEEEEEEEECSSCEEEEEEEEEEECCCC-----CCCCTTEEEEEEECHHHHTTC
T ss_pred HHHHHhhhhhhhCcEe--ecceEEEEEEEecCCceEEEEEEEEEecCCc-----EecCCCcceEEEEEHHHhhhc
Confidence 9999999999999999 4444455443333334455677777654221 112478889999999999764
No 21
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.72 E-value=2.6e-17 Score=137.21 Aligned_cols=123 Identities=14% Similarity=0.145 Sum_probs=78.6
Q ss_pred eEeecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCC
Q psy11834 42 LITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKN 121 (230)
Q Consensus 42 ~~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~G 121 (230)
.....-+|++++++..+++|||+| + +.+ .+..|+||||++|+|
T Consensus 22 ~~~~~v~v~~~v~~~~~~~vLL~~-------------r-~~~-----------------------~~g~w~lPGG~ve~g 64 (199)
T 3h95_A 22 SMSHQVGVAGAVFDESTRKILVVQ-------------D-RNK-----------------------LKNMWKFPGGLSEPE 64 (199)
T ss_dssp ----CCEEEEEEEETTTTEEEEEE-------------E-SSS-----------------------STTSBBCCEEECCTT
T ss_pred cCcccceEEEEEEeCCCCEEEEEE-------------E-cCC-----------------------CCCCEECCccccCCC
Confidence 345567788888886678999988 3 221 134678999999999
Q ss_pred CCHHHHHHHHHHhhhCCccCCCceEEEE--EEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHH
Q psy11834 122 KSLAEIAREEVLEECGYDVPVEKLEKIQ--TFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREY 199 (230)
Q Consensus 122 Es~~eAA~REl~EETGl~v~~~~l~~l~--~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~ 199 (230)
|++.+||+||++||||+.+ .....++ ..+..++.......+|++...... .....+++|+.++.|++++++.++
T Consensus 65 Es~~~aA~REl~EEtGl~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~ 140 (199)
T 3h95_A 65 EDIGDTAVREVFEETGIKS--EFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYS--FTINFCQEECLRCEWMDLNDLAKT 140 (199)
T ss_dssp CCHHHHHHHHHHHHHCCCE--EEEEEEEEEECC---------CEEEEEEEEESC--CCCCCCTTTEEEEEEEEHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCCcc--ccceEEEEEeeecCCCCceeEEEEEEEEEcCCC--cccCCCccceeeeEEEeHHHHhhh
Confidence 9999999999999999998 4333333 223333333333344555543211 122346789999999999999998
Q ss_pred hhcCCC
Q psy11834 200 LAQDEV 205 (230)
Q Consensus 200 ~~~~~~ 205 (230)
...+.+
T Consensus 141 ~~~~~~ 146 (199)
T 3h95_A 141 ENTTPI 146 (199)
T ss_dssp SSBCHH
T ss_pred hhcChH
Confidence 655544
No 22
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.71 E-value=1.3e-16 Score=121.77 Aligned_cols=107 Identities=23% Similarity=0.192 Sum_probs=79.5
Q ss_pred CeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHH
Q psy11834 47 KDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAE 126 (230)
Q Consensus 47 ~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~e 126 (230)
-++++++++ .++++||+| +.+ ..|++|||++++||++.+
T Consensus 3 ~~~~~vi~~-~~~~vLl~~-------------r~~---------------------------g~w~~PgG~ve~gE~~~~ 41 (126)
T 1vcd_A 3 LGAGGVVFN-AKREVLLLR-------------DRM---------------------------GFWVFPKGHPEPGESLEE 41 (126)
T ss_dssp EEEEEEEEC-TTSCEEEEE-------------CTT---------------------------SCEECCEECCCTTCCHHH
T ss_pred eEEEEEEEc-CCCEEEEEE-------------ECC---------------------------CCccCCcCcCCCCCCHHH
Confidence 367778777 467999998 432 248899999999999999
Q ss_pred HHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhh
Q psy11834 127 IAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLA 201 (230)
Q Consensus 127 AA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~ 201 (230)
||.||++||||+.+ .....++.+..........+++|++...... ...+.|..++.|++++++.+++.
T Consensus 42 aa~RE~~EE~Gl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~w~~~~el~~~~~ 109 (126)
T 1vcd_A 42 AAVREVWEETGVRA--EVLLPLYPTRYVNPKGVEREVHWFLMRGEGA-----PRLEEGMTGAGWFSPEEARALLA 109 (126)
T ss_dssp HHHHHHHHHHCCEE--EEEEEEEEEEEECTTSCEEEEEEEEEEEESC-----CCCCTTCCEEEEECHHHHHHHBC
T ss_pred HHHHHHHHhhCcEe--eeccEEeEEEEecCCceEEEEEEEEEEcCCC-----CCCCcceeeeEEcCHHHHHHhhc
Confidence 99999999999999 6666666543322333456677877654221 22456788999999999998754
No 23
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.3e-17 Score=129.52 Aligned_cols=118 Identities=13% Similarity=0.158 Sum_probs=82.4
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
.+.+++++++..++++||+| +.+ ...|++|||++++|||+.
T Consensus 4 i~~~~~~i~~~~~~~vLl~~-------------r~~--------------------------~g~w~~PgG~ve~gEs~~ 44 (146)
T 2jvb_A 4 IPVRGAAIFNENLSKILLVQ-------------GTE--------------------------SDSWSFPRGKISKDENDI 44 (146)
T ss_dssp SCCEEEEEBCTTSSEEEEEC-------------CSS--------------------------SSCCBCCEECCCSSSCHH
T ss_pred eEEEEEEEEeCCCCEEEEEE-------------EcC--------------------------CCcEECCcccCCCCCCHH
Confidence 45677777774458999998 432 235789999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCC-CCCceEEEEEEcHHHHHHHhhcCC
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGG-VDEELIEVVEMGLEEAREYLAQDE 204 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~-~~~E~~~v~wv~~eE~~~~~~~~~ 204 (230)
+||.||++||||+.+ ..+..+..++.. ...+...++|++...... ..... +++|+.++.|++++++.+++..+.
T Consensus 45 ~aa~RE~~EEtGl~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 119 (146)
T 2jvb_A 45 DCCIREVKEEIGFDL--TDYIDDNQFIER-NIQGKNYKIFLISGVSEV--FNFKPQVRNEIDKIEWFDFKKISKTMYKSN 119 (146)
T ss_dssp HHHHHHHHHHTSCCC--SSSSCSSCEEEE-EETTEEEEEEEECCCCSS--SCCCCCCSSSCCCEEEEEHHHHHTGGGCSS
T ss_pred HHHHHHHHHHHCCCc--hHhccccccccc-ccCCceEEEEEEEecccc--ccCCcCCcchhheeEEeEHHHHHhhhcccc
Confidence 999999999999988 443333333322 123345666666532211 11122 467889999999999999999887
Q ss_pred CCC
Q psy11834 205 VRS 207 (230)
Q Consensus 205 ~~~ 207 (230)
++.
T Consensus 120 ~~~ 122 (146)
T 2jvb_A 120 IKY 122 (146)
T ss_dssp CCC
T ss_pred hhh
Confidence 763
No 24
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.70 E-value=6.4e-17 Score=129.56 Aligned_cols=110 Identities=9% Similarity=0.036 Sum_probs=78.2
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+-+|++++++ +++|||+| +.+.+ .+..|+||||++++||++.
T Consensus 29 ~~~v~~vi~~--~~~vLL~~-------------r~~~~-----------------------~~~~w~lPgG~ve~gEs~~ 70 (157)
T 4dyw_A 29 RVGCGAAIVR--DGRILLIK-------------RKRAP-----------------------EAGCWGLPGGKVDWLEPVE 70 (157)
T ss_dssp EEEEEEEEEE--TTEEEEEE-------------ECSSS-----------------------STTCEECCEEECCTTCCHH
T ss_pred eeEEEEEEEE--CCEEEEEE-------------ecCCC-----------------------CCCEEECCcccCCCCCCHH
Confidence 3466677776 68999999 65533 2467899999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEEEcC--CCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHH
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTFRSG--VGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEARE 198 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~~~~--~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~ 198 (230)
+||+||++||||+.+ .....++.+... ........++|++...... ....+++|+.++.|++++++.+
T Consensus 71 ~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 71 RAVCREIEEELGIAL--ERATLLCVVDHIDAANGEHWVAPVYLAHAFSGE---PRVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp HHHHHHHHHHHSCEE--ESCEEEEEEEEEETTTTEEEEEEEEEESEEESC---CCCSCTTTEEEEEEEETTSCCS
T ss_pred HHHHHHHHHHHCccc--ccCcEEEEEEeeccCCCcEEEEEEEEEEEcCCC---cccCCCCcEeEEEEECHHHccc
Confidence 999999999999999 555555443322 1233345567777654221 1122567899999999999875
No 25
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.70 E-value=4.6e-16 Score=122.67 Aligned_cols=116 Identities=18% Similarity=0.107 Sum_probs=78.4
Q ss_pred eecCeEEEEEEEc--CCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCC
Q psy11834 44 TQHKDYYIVMNKI--TEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKN 121 (230)
Q Consensus 44 ~~~~~v~vl~~~~--~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~G 121 (230)
.++.+|.|+++.. .++++||+| +.+ +..|++|||++|+|
T Consensus 3 ~~~~~v~vvi~~~~~~~~~vLl~~-------------r~~--------------------------~g~w~~PgG~ve~g 43 (149)
T 3son_A 3 RQPFQVLVIPFIKTEANYQFGVLH-------------RTD--------------------------ADVWQFVAGGGEDE 43 (149)
T ss_dssp -CCCEEEEEEEEECSSSEEEEEEE-------------ESS--------------------------SSCEECEEEECCTT
T ss_pred CCceEEEEEEEEecCCCeEEEEEE-------------EcC--------------------------CCCEeCCccccCCC
Confidence 3466787777643 356899998 432 24588999999999
Q ss_pred CCHHHHHHHHHHhhhCCccCCCceEEEEEEEc------C-CCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHH
Q psy11834 122 KSLAEIAREEVLEECGYDVPVEKLEKIQTFRS------G-VGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLE 194 (230)
Q Consensus 122 Es~~eAA~REl~EETGl~v~~~~l~~l~~~~~------~-~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~e 194 (230)
|++.+||+||++||||+.+... ...+..++. . ++......++|.+...... ..... ..|..++.|++++
T Consensus 44 E~~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~-~~E~~~~~W~~~~ 119 (149)
T 3son_A 44 EAISETAKRESIEELNLDVDVK-MYSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTSCS--YQVTL-SLEHSELRWVSYE 119 (149)
T ss_dssp CCHHHHHHHHHHHHHTCCSCCC-EEEEEEEEEEEGGGTCSSSCSEEEEEEEEEECTTTG--GGCCC-CTTEEEEEEECHH
T ss_pred CCHHHHHHHHHHHHhCCCcccc-eEEEEeeecccceeeccCCceEeEEEEEEEEcCCCC--CcccC-CCceeeEEEeCHH
Confidence 9999999999999999998542 112222111 1 2223345677888764211 11112 4789999999999
Q ss_pred HHHHHhhc
Q psy11834 195 EAREYLAQ 202 (230)
Q Consensus 195 E~~~~~~~ 202 (230)
++.+++..
T Consensus 120 el~~~~~~ 127 (149)
T 3son_A 120 SAIQLLEW 127 (149)
T ss_dssp HHHHHCCC
T ss_pred HHHHHhcC
Confidence 99988653
No 26
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.70 E-value=1.5e-16 Score=126.42 Aligned_cols=117 Identities=15% Similarity=0.162 Sum_probs=81.7
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+.++++++++ .++++||+| +.+. +..|++|||++++|||+.
T Consensus 14 ~~~v~~~i~~-~~~~vLl~~-------------r~~~-------------------------~g~w~~PgG~ve~gE~~~ 54 (165)
T 1f3y_A 14 RRNVGICLMN-NDKKIFAAS-------------RLDI-------------------------PDAWQMPQGGIDEGEDPR 54 (165)
T ss_dssp CCEEEEEEEC-TTSCEEEEE-------------ETTE-------------------------EEEEECCEEECCTTCCHH
T ss_pred eeeEEEEEEC-CCCcEEEEe-------------cCCC-------------------------CCcEECCeeccCCCCCHH
Confidence 6788888887 478999999 5432 246999999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEEEcCCC----------------ccCeEEEEEEEEEcCcc-cccC--CCCCCCceE
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTFRSGVG----------------SAGDRQTLFFVEVTDDM-KVNS--GGGVDEELI 186 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~~~~~~----------------~s~~~~~~y~a~~~~~~-~~~~--~~~~~~E~~ 186 (230)
+||+||++||||+.+ ..+........... ..+...++|++...... .+.. ...++.|+.
T Consensus 55 ~aa~RE~~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~ 132 (165)
T 1f3y_A 55 NAAIRELREETGVTS--AEVIAEVPYWLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFG 132 (165)
T ss_dssp HHHHHHHHHHHCCCS--EEEEEECSSCCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEE
T ss_pred HHHHHHHHHhhCCCh--hhhhcccccceeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhh
Confidence 999999999999987 44433221111111 11235678888865432 1111 111467999
Q ss_pred EEEEEcHHHHHHHhhcC
Q psy11834 187 EVVEMGLEEAREYLAQD 203 (230)
Q Consensus 187 ~v~wv~~eE~~~~~~~~ 203 (230)
++.|++++++.+++...
T Consensus 133 ~~~W~~~~el~~~~~~~ 149 (165)
T 1f3y_A 133 EWSWVTPEQLIDLTVEF 149 (165)
T ss_dssp EEEEECHHHHHHHBCGG
T ss_pred eeEEecHHHHHHHhhhh
Confidence 99999999999987543
No 27
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.70 E-value=2.2e-16 Score=122.42 Aligned_cols=88 Identities=16% Similarity=0.058 Sum_probs=63.8
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEE----EEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCC
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKI----QTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDE 183 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l----~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~ 183 (230)
+..|++|||++++||++.+||+||++||||+.+ ..+..+ +.+...........++|++..... .....+.
T Consensus 29 ~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~ 102 (138)
T 1ktg_A 29 PHHWTPPKGHVDPGEDEWQAAIRETKEEANITK--EQLTIHEDCHETLFYEAKGKPKSVKYWLAKLNNP----DDVQLSH 102 (138)
T ss_dssp TCCEESSEEECCTTCCHHHHHHHHHHHHHCCCG--GGEEEEEEEEEEEEEEETTEEEEEEEEEEEECSC----CCCCCCT
T ss_pred CCcEeCCccccCCCCCHHHHHHHHHHHHHCCCc--cceEEeccccceEEEEeCCCceEEEEEEEEecCC----cccCCCc
Confidence 346899999999999999999999999999976 443332 222221123345677888886532 1123567
Q ss_pred ceEEEEEEcHHHHHHHhh
Q psy11834 184 ELIEVVEMGLEEAREYLA 201 (230)
Q Consensus 184 E~~~v~wv~~eE~~~~~~ 201 (230)
|..++.|++++++.+++.
T Consensus 103 e~~~~~W~~~~el~~~~~ 120 (138)
T 1ktg_A 103 EHQNWKWCELEDAIKIAD 120 (138)
T ss_dssp TEEEEEEECHHHHHHHHC
T ss_pred hhcEeEeccHHHHHHhhc
Confidence 899999999999999864
No 28
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.69 E-value=1.9e-16 Score=127.80 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=76.3
Q ss_pred CeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHH
Q psy11834 47 KDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAE 126 (230)
Q Consensus 47 ~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~e 126 (230)
..|++++++ ++++||+| +.+. +..|+||||++|+||++.+
T Consensus 24 ~~v~~ii~~--~~~vLL~~-------------r~~~-------------------------~~~w~~PgG~ve~gEs~~~ 63 (171)
T 3id9_A 24 VRVTGILIE--DEKVLLVK-------------QKVA-------------------------NRDWSLPGGRVENGETLEE 63 (171)
T ss_dssp EEEEEEEEE--TTEEEEEE-------------CSST-------------------------TCCEECCEEECCTTCCHHH
T ss_pred EEEEEEEEE--CCEEEEEE-------------EECC-------------------------CCeEECCCccCCCCCCHHH
Confidence 355666665 68999999 6542 3468999999999999999
Q ss_pred HHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccc-cCCCCCCCceEEEEEEcHHHHHHHhhcCC
Q psy11834 127 IAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKV-NSGGGVDEELIEVVEMGLEEAREYLAQDE 204 (230)
Q Consensus 127 AA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~-~~~~~~~~E~~~v~wv~~eE~~~~~~~~~ 204 (230)
||+||++||||+.+ .....++.+............+|++........ .....++.|..++.|++++++.++.....
T Consensus 64 aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~ 140 (171)
T 3id9_A 64 AMIREMREETGLEV--KIKKLLYVCDKPDASPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSET 140 (171)
T ss_dssp HHHHHHHHHHCCCE--EEEEEEEEEEETTSSSCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTT
T ss_pred HHHHHHHHHHCCcc--ccceEEEEEcccCCCCcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHH
Confidence 99999999999998 555555544443333333445566665432211 11122567888999999999998754433
No 29
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.69 E-value=1.1e-16 Score=124.26 Aligned_cols=84 Identities=21% Similarity=0.155 Sum_probs=61.0
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEE
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIE 187 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~ 187 (230)
+..|+||||++++||++.+||.||++||||+.+ ..+..++.+.+........+++|.+..... .....|+.+
T Consensus 34 ~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~~ 105 (140)
T 2rrk_A 34 AGLWEFAGGKVEPDESQRQALVRELREELGIEA--TVGEYVASHQREVSGRIIHLHAWHVPDFHG------TLQAHEHQA 105 (140)
T ss_dssp CCCEECCEEECCTTSCHHHHHHHHHHHHSCEEE--ECCEEEEEEEEEETTEEEEEEEEEESEEEE------CCCCSSCSC
T ss_pred CCEEECCceecCCCCCHHHHHHHHHHHHHCCee--ecccEEEEEEEecCCcEEEEEEEEEEeeCC------CcCCCccce
Confidence 467999999999999999999999999999998 555666554332222334556777764321 122446668
Q ss_pred EEEEcHHHHHHH
Q psy11834 188 VVEMGLEEAREY 199 (230)
Q Consensus 188 v~wv~~eE~~~~ 199 (230)
+.|++++++.++
T Consensus 106 ~~W~~~~el~~~ 117 (140)
T 2rrk_A 106 LVWCSPEEALQY 117 (140)
T ss_dssp EEEECHHHHTTS
T ss_pred eEEeCHHHHhhC
Confidence 999999999875
No 30
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.69 E-value=1.6e-16 Score=122.32 Aligned_cols=107 Identities=18% Similarity=0.153 Sum_probs=77.6
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
..++++++++ ++++||+| +.+ ..|++|||++++|||+.
T Consensus 4 ~~~~~~vi~~--~~~vLl~~-------------r~~---------------------------~~w~~PgG~ve~gE~~~ 41 (134)
T 2pbt_A 4 EFSAGGVLFK--DGEVLLIK-------------TPS---------------------------NVWSFPKGNIEPGEKPE 41 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEE-------------CTT---------------------------SCEECCEEECCTTCCHH
T ss_pred ceEEEEEEEE--CCEEEEEE-------------eCC---------------------------CcEECCccccCCCCCHH
Confidence 4567777776 57999999 432 35889999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEE---EcCCC-ccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhh
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTF---RSGVG-SAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLA 201 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~---~~~~~-~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~ 201 (230)
+||.||++||||+.+ .....++.+ +..++ ......++|.+...... ....+ |..++.|++++++.+++.
T Consensus 42 ~aa~RE~~EE~Gl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-e~~~~~W~~~~el~~~~~ 114 (134)
T 2pbt_A 42 ETAVREVWEETGVKG--EILDYIGEIHYWYTLKGERIFKTVKYYLMKYKEGE----PRPSW-EVKDAKFFPIKEAKKLLK 114 (134)
T ss_dssp HHHHHHHHHHHSEEE--EEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEC----CCCCT-TSSEEEEEEHHHHHHHCC
T ss_pred HHHHHHHHHHHCCcc--EEeeeeeEEEEEeeCCCcEEEEEEEEEEEEecCCC----cCCCc-ceeEEEEEcHHHHHhhhc
Confidence 999999999999998 666655543 22222 23345677777764321 11222 888999999999998754
No 31
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.69 E-value=2.8e-16 Score=124.67 Aligned_cols=112 Identities=11% Similarity=0.048 Sum_probs=78.1
Q ss_pred CeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHH
Q psy11834 47 KDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAE 126 (230)
Q Consensus 47 ~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~e 126 (230)
.++++++++ .++++||+| +.+.+ .+..|+||||++++||++.+
T Consensus 19 ~~v~~vi~~-~~~~vLl~~-------------r~~~~-----------------------~~g~w~~PgG~ve~gE~~~~ 61 (160)
T 1rya_A 19 VSLDFIVEN-SRGEFLLGK-------------RTNRP-----------------------AQGYWFVPGGRVQKDETLEA 61 (160)
T ss_dssp EEEEEEEEC-TTSCEEEEE-------------ECSSS-----------------------STTSEECCEEECCTTCCHHH
T ss_pred EEEEEEEEc-CCCEEEEEe-------------ccCCC-----------------------CCCEEECCccccCCCCCHHH
Confidence 366777776 478999998 54422 24568999999999999999
Q ss_pred HHHHHHHhhhCCccCCCceEEEEEE---EcCC--C---ccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHH
Q psy11834 127 IAREEVLEECGYDVPVEKLEKIQTF---RSGV--G---SAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEARE 198 (230)
Q Consensus 127 AA~REl~EETGl~v~~~~l~~l~~~---~~~~--~---~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~ 198 (230)
||+||++||||+.+....+..++.+ +... + ......++|.+..... ....++.|..++.|++++++.+
T Consensus 62 aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~e~~~~~W~~~~el~~ 137 (160)
T 1rya_A 62 AFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEE----ELLLPDEQHDDYRWLTSDALLA 137 (160)
T ss_dssp HHHHHHHHHHSSCCCGGGSEEEEEEEEEESSBTTBSSSCEEEEEEEEEEECCGG----GCCCCSSSEEEEEEECHHHHHH
T ss_pred HHHHHHHHHHCCCCCcccceEEEEEeEEEcccccCCCcCcEEEEEEEEEEcCcc----ccccCCCccceEEEecHHHHhh
Confidence 9999999999999633455555543 2221 0 1134556777775422 1123467889999999999987
Q ss_pred H
Q psy11834 199 Y 199 (230)
Q Consensus 199 ~ 199 (230)
+
T Consensus 138 ~ 138 (160)
T 1rya_A 138 S 138 (160)
T ss_dssp C
T ss_pred c
Confidence 4
No 32
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.68 E-value=2.3e-17 Score=145.11 Aligned_cols=118 Identities=16% Similarity=0.118 Sum_probs=78.6
Q ss_pred ecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCH
Q psy11834 45 QHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSL 124 (230)
Q Consensus 45 ~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~ 124 (230)
+..++++++++..++++||+| +++.+ ..|++|||++|+||++
T Consensus 100 ~v~~v~avv~~~~~~~vLLv~-------------r~~~~-------------------------g~W~lPgG~ve~gEs~ 141 (271)
T 2a6t_A 100 RIPVRGAIMLDMSMQQCVLVK-------------GWKAS-------------------------SGWGFPKGKIDKDESD 141 (271)
T ss_dssp CCCEEEEEEBCSSSSEEEEEE-------------ESSTT-------------------------CCCBCSEEECCTTCCH
T ss_pred CCCeEEEEEEECCCCEEEEEE-------------EeCCC-------------------------CeEECCcccCCCCcCH
Confidence 346778888875568999999 76532 3478999999999999
Q ss_pred HHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCC-CCCCceEEEEEEcHHHHHHHhhcC
Q psy11834 125 AEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGG-GVDEELIEVVEMGLEEAREYLAQD 203 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~-~~~~E~~~v~wv~~eE~~~~~~~~ 203 (230)
.+||+||++||||+.+ ..+..+.. +..++..+..+++|++...... .... .+++|+.++.|++++++.++...+
T Consensus 142 ~eAA~REl~EEtGl~~--~~l~~~~~-~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 216 (271)
T 2a6t_A 142 VDCAIREVYEETGFDC--SSRINPNE-FIDMTIRGQNVRLYIIPGISLD--TRFESRTRKEISKIEWHNLMDLPTFKKNK 216 (271)
T ss_dssp HHHHHHHHHHHHCCCC--TTTCCTTC-EEEEEETTEEEEEEEECCCCTT--CCCC------EEEEEEEEGGGSTTCC---
T ss_pred HHHHHHHHHHHhCCCc--eeeeeeee-eccCCcCCceEEEEEEEEecCc--ccCCCCCccceeEEEEEEHHHHHHHHhcC
Confidence 9999999999999998 44433322 2222334556778887643211 1112 256799999999999999987776
Q ss_pred CC
Q psy11834 204 EV 205 (230)
Q Consensus 204 ~~ 205 (230)
.+
T Consensus 217 ~~ 218 (271)
T 2a6t_A 217 PQ 218 (271)
T ss_dssp --
T ss_pred cc
Confidence 54
No 33
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.68 E-value=1.9e-16 Score=123.60 Aligned_cols=117 Identities=14% Similarity=0.065 Sum_probs=82.4
Q ss_pred CeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHH
Q psy11834 47 KDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAE 126 (230)
Q Consensus 47 ~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~e 126 (230)
..+++++++ .++++||+| +.+.+. .+..|+||||++++||++.+
T Consensus 9 ~~~~~vi~~-~~~~vLl~~-------------r~~~~~----------------------~~g~w~lPgG~ve~gE~~~~ 52 (144)
T 3r03_A 9 LVTAAALID-PDGRVLLAQ-------------RPPGKS----------------------LAGLWEFPGGKLEPGETPEA 52 (144)
T ss_dssp EEEEEEEBC-TTSCEEEEE-------------CCTTSS----------------------STTCEECSEEECCTTCCHHH
T ss_pred EEEEEEEEc-CCCEEEEEE-------------eCCCCC----------------------CCCcEECCCcEecCCCCHHH
Confidence 445556665 478999998 543332 35679999999999999999
Q ss_pred HHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCC
Q psy11834 127 IAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEV 205 (230)
Q Consensus 127 AA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~ 205 (230)
||.||++||||+.+....+..+..+..........+++|.+..... .....|..++.|++++++.++......
T Consensus 53 aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~~~~~~~ 125 (144)
T 3r03_A 53 ALVRELAEELGVDTRASCLAPLAFASHSYDTFHLLMPLYACRSWRG------RATAREGQTLAWVRAERLREYPMPPAD 125 (144)
T ss_dssp HHHHHHHHHHCCBCCGGGCEEEEEEEEECSSSEEEEEEEEECCCBS------CCCCCSSCEEEEECGGGGGGSCCCTTT
T ss_pred HHHHHHHHHhCceeeccceEEEEeeeccCCCeEEEEEEEEEEecCC------ccCCCCcceEEEEeHHHhccCCCCcch
Confidence 9999999999999965555666554444344445566777764321 223566778999999999886544333
No 34
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.68 E-value=8.7e-16 Score=126.94 Aligned_cols=124 Identities=19% Similarity=0.090 Sum_probs=83.3
Q ss_pred ecCeEeecccccceee--Eee-cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccC
Q psy11834 27 QEALIKENQYCHPQFL--ITQ-HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKY 103 (230)
Q Consensus 27 ~~g~~~~~~~~~~~~~--~~~-~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~ 103 (230)
++|....+..|..-.. ..+ ..++++++++ +++|||+| +.+.+.
T Consensus 18 ~~G~~~~~~~~~~~~~~~~~~~~~~v~~ii~~--~~~vLL~~-------------r~~~~~------------------- 63 (189)
T 3cng_A 18 PEGDTLPRYICPKCHTIHYQNPKVIVGCIPEW--ENKVLLCK-------------RAIAPY------------------- 63 (189)
T ss_dssp CTTCSSCEEEETTTTEEECCCCEEEEEEEEEE--TTEEEEEE-------------ESSSSS-------------------
T ss_pred ccCCCCcceECCCCCCccCCCCceEEEEEEEe--CCEEEEEE-------------ccCCCC-------------------
Confidence 4666655543432211 111 2255666665 78999999 665432
Q ss_pred CCCCCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCC
Q psy11834 104 PAELGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDE 183 (230)
Q Consensus 104 ~~~~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~ 183 (230)
...|+||||++|+||++.+||+||++||||+.+ .....+.. +..+. .....++|++...... ...+.
T Consensus 64 ----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~~~~-~~~~~-~~~~~~~f~~~~~~~~-----~~~~~ 130 (189)
T 3cng_A 64 ----RGKWTLPAGFMENNETLVQGAARETLEEANARV--EIRELYAV-YSLPH-ISQVYMLFRAKLLDLD-----FFPGI 130 (189)
T ss_dssp ----TTCEECSEEECCTTCCHHHHHHHHHHHHHCCCE--EEEEEEEE-EEEGG-GTEEEEEEEEEECCSC-----CCCCT
T ss_pred ----CCeEECceeeccCCCCHHHHHHHHHHHHHCCcc--ccceeEEE-EecCC-CcEEEEEEEEEeCCCc-----cCCCc
Confidence 346899999999999999999999999999998 43333332 22222 3567788888865321 11367
Q ss_pred ceEEEEEEcHHHHH
Q psy11834 184 ELIEVVEMGLEEAR 197 (230)
Q Consensus 184 E~~~v~wv~~eE~~ 197 (230)
|..++.|++++++.
T Consensus 131 E~~~~~W~~~~el~ 144 (189)
T 3cng_A 131 ESLEVRLFGEQEIP 144 (189)
T ss_dssp TEEEEEEECTTTCC
T ss_pred cceeEEEECHHHcC
Confidence 89999999999986
No 35
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.68 E-value=1.3e-16 Score=131.70 Aligned_cols=89 Identities=17% Similarity=0.162 Sum_probs=68.6
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEE
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIE 187 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~ 187 (230)
...|+||||++|+||++.+||+||++||||+.+ ..+..++.+....+..+..+++|++....... ....+++|+.+
T Consensus 63 ~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~~~~~E~~~ 138 (194)
T 1nqz_A 63 KGQIAFPGGSLDAGETPTQAALREAQEEVALDP--AAVTLLGELDDVFTPVGFHVTPVLGRIAPEAL--DTLRVTPEVAQ 138 (194)
T ss_dssp CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCG--GGCEEEEECCCEEETTTEEEEEEEEEECGGGG--GGCCCCTTEEE
T ss_pred CCeEECCcccCCCCCCHHHHHHHHHHHHHCCCc--cceEEEEEccCccCCCCeEEEEEEEEecCCcc--ccCCCccceeE
Confidence 356899999999999999999999999999999 77777776544333456678889888653211 02346778999
Q ss_pred EEEEcHHHH-HHHh
Q psy11834 188 VVEMGLEEA-REYL 200 (230)
Q Consensus 188 v~wv~~eE~-~~~~ 200 (230)
+.|++++++ .+.+
T Consensus 139 ~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 139 IITPTLAELRAVPL 152 (194)
T ss_dssp EECCBHHHHHHSCC
T ss_pred EEEEEHHHhccCCC
Confidence 999999999 6643
No 36
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.67 E-value=2.7e-16 Score=123.07 Aligned_cols=113 Identities=17% Similarity=0.122 Sum_probs=78.9
Q ss_pred eecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCC
Q psy11834 44 TQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKS 123 (230)
Q Consensus 44 ~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs 123 (230)
..+.++++++++..++++||+| + + ...|+||||++++||+
T Consensus 16 ~~~~~~~~vi~~~~~~~vLl~~-------------r--~-------------------------~g~w~~PgG~ve~gE~ 55 (148)
T 2azw_A 16 QTRYAAYIIVSKPENNTMVLVQ-------------A--P-------------------------NGAYFLPGGEIEGTET 55 (148)
T ss_dssp EECCEEEEECEEGGGTEEEEEE-------------C--T-------------------------TSCEECSEEECCTTCC
T ss_pred eeeeEEEEEEECCCCCeEEEEE-------------c--C-------------------------CCCEeCCCcccCCCCC
Confidence 3466777777774478999998 3 2 1358899999999999
Q ss_pred HHHHHHHHHHhhhCCccCCCceEEEEEE----EcCCCc--cCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHH
Q psy11834 124 LAEIAREEVLEECGYDVPVEKLEKIQTF----RSGVGS--AGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAR 197 (230)
Q Consensus 124 ~~eAA~REl~EETGl~v~~~~l~~l~~~----~~~~~~--s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~ 197 (230)
+.+||+||++||||+.+ .....++.+ +...+. .....++|.+...... ....+|..++.|++++++.
T Consensus 56 ~~~aa~RE~~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~ 128 (148)
T 2azw_A 56 KEEAIHREVLEELGISV--EIGCYLGEADEYFYSNHRQTAYYNPGYFYVANTWRQL-----SEPLERTNTLHWVAPEEAV 128 (148)
T ss_dssp HHHHHHHHHHHHHSEEE--EEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEC-----SSCC-CCSEEEEECHHHHH
T ss_pred HHHHHHHHHHHHhCCee--EeeeEEEEEEEEEcCCCCCcceEEEEEEEEEEcCcCC-----cCCCCceeeEEEeeHHHHH
Confidence 99999999999999998 555555442 222222 2234677777754321 1123456689999999999
Q ss_pred HHhhcC
Q psy11834 198 EYLAQD 203 (230)
Q Consensus 198 ~~~~~~ 203 (230)
+++..+
T Consensus 129 ~~~~~~ 134 (148)
T 2azw_A 129 RLLKRG 134 (148)
T ss_dssp HHBSCH
T ss_pred hhhcch
Confidence 986543
No 37
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.67 E-value=4.8e-16 Score=121.48 Aligned_cols=113 Identities=18% Similarity=0.164 Sum_probs=78.7
Q ss_pred ecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCH
Q psy11834 45 QHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSL 124 (230)
Q Consensus 45 ~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~ 124 (230)
.+.++++++++.+++++||+| +.+. +..|++|||++|+||++
T Consensus 8 ~~~~v~~~i~~~~~~~vLl~~-------------r~~~-------------------------~g~w~~PgG~ve~gE~~ 49 (150)
T 2o1c_A 8 RPVSILVVIYAQDTKRVLMLQ-------------RRDD-------------------------PDFWQSVTGSVEEGETA 49 (150)
T ss_dssp CSEEEEEEEEETTTCEEEEEE-------------CSSS-------------------------TTCEESEEEECCTTCCH
T ss_pred CceEEEEEEEeCCCCEEEEEE-------------ecCC-------------------------CCceECCccccCCCCCH
Confidence 345788888885458999998 4221 23688999999999999
Q ss_pred HHHHHHHHHhhhCCccCCCceEEEEE-----E--Ec------CCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEE
Q psy11834 125 AEIAREEVLEECGYDVPVEKLEKIQT-----F--RS------GVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEM 191 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l~~l~~-----~--~~------~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv 191 (230)
.+||+||++||||+.+....+..++. + .. ..+......++|.+...... .....|..++.|+
T Consensus 50 ~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-----~~~~~E~~~~~W~ 124 (150)
T 2o1c_A 50 PQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHER-----QIVFTEHLAYKWL 124 (150)
T ss_dssp HHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCC-----CCCCSSSSCEEEE
T ss_pred HHHHHHHHHHHhCCCccccceeEEeeeceeeeeeecccccccCCCCcceEEEEEEEEcCCCC-----CcChhHhhccEee
Confidence 99999999999999984332333321 1 10 11223456778888865321 1123677889999
Q ss_pred cHHHHHHHh
Q psy11834 192 GLEEAREYL 200 (230)
Q Consensus 192 ~~eE~~~~~ 200 (230)
+++++.++.
T Consensus 125 ~~~el~~~~ 133 (150)
T 2o1c_A 125 DAPAAAALT 133 (150)
T ss_dssp EHHHHHHHC
T ss_pred cHHHHHhhh
Confidence 999999875
No 38
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.67 E-value=8.7e-17 Score=134.43 Aligned_cols=91 Identities=15% Similarity=0.058 Sum_probs=66.7
Q ss_pred EEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEE
Q psy11834 110 TLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVV 189 (230)
Q Consensus 110 ~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~ 189 (230)
.|+||||++|+||++.+||+||++||||+.+ ..+..++.+.... .....++|++.+... .........+..++.
T Consensus 67 ~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~--~~~~~l~~~~~~~--~~~~~~~f~~~~~~~--~~~~~~~~e~~~~~~ 140 (194)
T 2fvv_A 67 RWIVPGGGMEPEEEPSVAAVREVCEEAGVKG--TLGRLVGIFENQE--RKHRTYVYVLIVTEV--LEDWEDSVNIGRKRE 140 (194)
T ss_dssp SEECSEEECCTTCCHHHHHHHHHHHHHCEEE--EEEEEEEEEEETT--TTEEEEEEEEEEEEE--CSSCHHHHHHCCCEE
T ss_pred cEECCCCcCCCCcCHHHHHHHHHHHHhCCcc--ccceEEEEEEcCC--CceEEEEEEEEEccc--cCCCCCcccccceEE
Confidence 5889999999999999999999999999998 6677777766432 345677888775321 111001112345799
Q ss_pred EEcHHHHHHHhhcCCCC
Q psy11834 190 EMGLEEAREYLAQDEVR 206 (230)
Q Consensus 190 wv~~eE~~~~~~~~~~~ 206 (230)
|++++++.+++..+...
T Consensus 141 W~~~~el~~~l~~~~~~ 157 (194)
T 2fvv_A 141 WFKIEDAIKVLQYHKPV 157 (194)
T ss_dssp EEEHHHHHHHHTTTCHH
T ss_pred EEEHHHHHHHHhcCcHH
Confidence 99999999998877554
No 39
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.67 E-value=4.4e-16 Score=129.36 Aligned_cols=121 Identities=14% Similarity=0.131 Sum_probs=76.6
Q ss_pred EeecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCC
Q psy11834 43 ITQHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNK 122 (230)
Q Consensus 43 ~~~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GE 122 (230)
...|.++++++++.+++++||+| +.+ ...|++|||++|+||
T Consensus 42 ~~~h~~~~~vv~~~~~~~vLL~~-------------r~~--------------------------~g~w~lPgG~ve~gE 82 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKERNKFLMIH-------------HNI--------------------------YNSWAWTGGHSDNEK 82 (197)
T ss_dssp SSEEEEEEEEEECTTSCEEEEEE-------------ETT--------------------------TTEEECEEEECTTCC
T ss_pred CCccEEEEEEEEECCCCEEEEEE-------------ecC--------------------------CCCEECCccccCCCC
Confidence 34567888888886556999999 432 236899999999999
Q ss_pred CHHHHHHHHHHhhhCCc-cCCC--ceEEEEEEEcCCCc---------cCeEEEEEEEEEcCcccccCCCCCCCceEEEEE
Q psy11834 123 SLAEIAREEVLEECGYD-VPVE--KLEKIQTFRSGVGS---------AGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVE 190 (230)
Q Consensus 123 s~~eAA~REl~EETGl~-v~~~--~l~~l~~~~~~~~~---------s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~w 190 (230)
|+.+||+||++||||+. +... .+..+. ++..++. .......|++..... .....+++|+.++.|
T Consensus 83 s~~eaa~REl~EEtGl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~~~W 158 (197)
T 3fcm_A 83 DQLKVAIKELKEETGVKNPTPLLDKAFALD-VLTVNGHIKRGKYVSSHLHLNLTYLIECSED---ETLMLKEDENSGVMW 158 (197)
T ss_dssp BHHHHHHHHHHHHHCCSSCEESCSSCSEEE-EEEECCEEETTEEECCEEEEEEEEEEECCTT---SCCCCCC----CEEE
T ss_pred CHHHHHHHHHHHHHCCCcccccCCCceEEE-EeeecCccccCcccCCceeEEEEEEEEeCCC---cccCCCcccccceEE
Confidence 99999999999999997 4211 111221 2211110 111224455553321 112235688999999
Q ss_pred EcHHHHHHHhhcCCCC
Q psy11834 191 MGLEEAREYLAQDEVR 206 (230)
Q Consensus 191 v~~eE~~~~~~~~~~~ 206 (230)
++++++.+++....+.
T Consensus 159 ~~~~el~~~~~~~~~~ 174 (197)
T 3fcm_A 159 IPFNEISKYCSEPHMI 174 (197)
T ss_dssp EEGGGHHHHCCCGGGH
T ss_pred ccHHHHHhhcCCHHHH
Confidence 9999999998766553
No 40
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.66 E-value=2.3e-16 Score=125.73 Aligned_cols=113 Identities=16% Similarity=0.118 Sum_probs=79.7
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
...+++++++ .++++||+| +.+.+. .+..|+||||++|+||++.
T Consensus 29 ~~~~~~~i~~-~~~~vLL~~-------------r~~~~~----------------------~~g~w~~PgG~ve~gE~~~ 72 (158)
T 3hhj_A 29 LIVVACALLD-QDNRVLLTQ-------------RPEGKS----------------------LAGLWEFPGGKVEQGETPE 72 (158)
T ss_dssp EEEEEEEEBC-TTSEEEEEE-------------CCCTTS----------------------CCCCCBCCEEECCTTCCHH
T ss_pred EEEEEEEEEe-CCCEEEEEE-------------eCCCCC----------------------CCCEEECCceeecCCCCHH
Confidence 3455556665 478999999 544333 3467899999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHh
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYL 200 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~ 200 (230)
+||.||++||||+.+....+..++.+...........++|.+.... +.....|..++.|++++++.++.
T Consensus 73 ~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~e~~~~~W~~~~el~~~~ 141 (158)
T 3hhj_A 73 ASLIRELEEELGVHVQADNLFPLTFASHGYETFHLLMPLYFCSHYK------GVAQGREGQNLKWIFINDLDKYP 141 (158)
T ss_dssp HHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSCEEEEEEEEESCCB------SCCCCTTSCEEEEEEGGGGGGSC
T ss_pred HHHHHHHHHHhCcEeecceEEEEEEEeeccCCcEEEEEEEEEEECC------CccCCccccceEEEcHHHHhhCC
Confidence 9999999999999996555555655444333334455666665332 12345677789999999997754
No 41
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.66 E-value=6.4e-16 Score=123.99 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=55.2
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEE------EEEcCCCccC-e--EEEEEEEEEcCcccccCC
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQ------TFRSGVGSAG-D--RQTLFFVEVTDDMKVNSG 178 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~------~~~~~~~~s~-~--~~~~y~a~~~~~~~~~~~ 178 (230)
+..|++|||++++||++.+||+||++||||+.+....+..+. .+....+... . ...+|.+..... .
T Consensus 54 ~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 128 (165)
T 3oga_A 54 PGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYADGRQEEIYMIYLIFDCVSANR-----D 128 (165)
T ss_dssp -CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--CCEEEEEEEEEEEEEEESCC-----C
T ss_pred CCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCCCCceeEEEEEEEEEeeccCC-----C
Confidence 467999999999999999999999999999998433332211 1111111111 1 123344443211 1
Q ss_pred CCCCCceEEEEEEcHHHHHHH
Q psy11834 179 GGVDEELIEVVEMGLEEAREY 199 (230)
Q Consensus 179 ~~~~~E~~~v~wv~~eE~~~~ 199 (230)
...++|..++.|++++++.++
T Consensus 129 ~~~~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 129 ICINDEFQDYAWVKPEELALY 149 (165)
T ss_dssp CCCCTTEEEEEEECGGGGGGS
T ss_pred ccCCchheeeEEccHHHHhhC
Confidence 123468899999999999875
No 42
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.65 E-value=3e-16 Score=123.19 Aligned_cols=85 Identities=18% Similarity=0.135 Sum_probs=61.1
Q ss_pred CCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceE
Q psy11834 107 LGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELI 186 (230)
Q Consensus 107 ~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~ 186 (230)
.+..|+||||++++||++.+||.||+.||||+.+ .....++.+..........+++|.+..... .....|..
T Consensus 46 ~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~ 117 (153)
T 3ees_A 46 LAGQWEFPGGKIENGETPEEALARELNEELGIEA--EVGELKLACTHSYGDVGILILFYEILYWKG------EPRAKHHM 117 (153)
T ss_dssp TTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEE--ECCCEEEEEEEEETTEEEEEEEEEECEEES------CCCCSSSS
T ss_pred CCCeEECCceeeCCCCCHHHHHHHHHHHHHCCcc--ccCceEEEEEEecCCCeEEEEEEEEEECCC------CcCCCccc
Confidence 3567999999999999999999999999999998 444444443332223334456666664321 23456677
Q ss_pred EEEEEcHHHHHHH
Q psy11834 187 EVVEMGLEEAREY 199 (230)
Q Consensus 187 ~v~wv~~eE~~~~ 199 (230)
++.|++++++.++
T Consensus 118 ~~~W~~~~el~~~ 130 (153)
T 3ees_A 118 MLEWIHPEELKHR 130 (153)
T ss_dssp EEEEECGGGGGGS
T ss_pred eEEEecHHHhhhC
Confidence 8999999998865
No 43
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.65 E-value=2.3e-16 Score=126.79 Aligned_cols=134 Identities=12% Similarity=0.023 Sum_probs=85.1
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+.++++++.+..++++||+| +.+.+ ....|+||||++++||++.
T Consensus 10 ~~~v~~vi~~~~~~~vLL~~-------------r~~~~-----------------------~~g~w~lPgG~ve~gEs~~ 53 (161)
T 3exq_A 10 ELVTMVMVTDPETQRVLVED-------------KVNVP-----------------------WKAGHSFPGGHVEVGEPCA 53 (161)
T ss_dssp EEEEEEEEBCTTTCCEEEEC-------------CCCCT-----------------------TTCSBBCCCCBCCTTSCHH
T ss_pred eEEEEEEEEeCCCCEEEEEE-------------ccCCC-----------------------CCCCEEccceecCCCCCHH
Confidence 44566677664336999998 44321 2234789999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEEEcCC--CccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcC
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTFRSGV--GSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQD 203 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~~~~~--~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~ 203 (230)
+||+||++||||+.+ ..+..++.+.... .......++|.+..... .....|..++.|++++++.++...
T Consensus 54 ~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~~~~- 124 (161)
T 3exq_A 54 TAAIREVFEETGLRL--SGVTFCGTCEWFDDDRQHRKLGLLYRASNFTG------TLKASAEGQLSWLPITALTRENSA- 124 (161)
T ss_dssp HHHHHHHHHHHCCEE--SCCEEEEEEEEECSSCSSEEEEEEEEECCEES------CCCGGGTTTEEEECGGGCCTTTBC-
T ss_pred HHHHHHHHHhhCcEe--cCCcEEEEEecccCCCCeEEEEEEEEEeccCC------ccCCCccceEEEeeHHHhhhCccC-
Confidence 999999999999999 5555555543332 22333445555543211 123445567999999998765332
Q ss_pred CCCChHHHHHHHHHHHHhhcCCceecC
Q psy11834 204 EVRSPSGFLFAMHWFLAAKAGQYVWRY 230 (230)
Q Consensus 204 ~~~~~~~~~~a~~~~~~~~~~~~~~~~ 230 (230)
....-.+..+++ +...+.|.|
T Consensus 125 -----~~~~~~l~~~~~-~~~e~~~~~ 145 (161)
T 3exq_A 125 -----ASLPEFLQVFTG-TASTLVSDS 145 (161)
T ss_dssp -----TTHHHHHHHHTT-SCSEEEESS
T ss_pred -----hHHHHHHHHHhh-cceeEEEEe
Confidence 233334455555 556566643
No 44
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.64 E-value=1.4e-16 Score=126.96 Aligned_cols=109 Identities=19% Similarity=0.182 Sum_probs=72.3
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+.++++++++ .++++||+| +. . ..|+||||++++||++.
T Consensus 21 ~~~v~~ii~~-~~~~vLL~~-------------r~---~------------------------~~w~lPgG~ve~gEs~~ 59 (153)
T 3eds_A 21 XPSVAAVIKN-EQGEILFQY-------------PG---G------------------------EYWSLPAGAIELGETPE 59 (153)
T ss_dssp EEEEEEEEBC-TTCCEEEEC-------------C------------------------------CBBCSEEECCTTSCHH
T ss_pred eeeEEEEEEc-CCCeEEEEE-------------cC---C------------------------CcEECCccccCCCCCHH
Confidence 5577777776 478999987 32 1 34779999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEE-------EcCCCc-cCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHH
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTF-------RSGVGS-AGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAR 197 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~-------~~~~~~-s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~ 197 (230)
+||+||++||||+.+ ..+..++.+ ....+. .....++|.+..... ....+++|..++.|++++++.
T Consensus 60 ~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~E~~~~~W~~~~el~ 133 (153)
T 3eds_A 60 EAVVREVWEETGLKV--QVKKQKGVFGGKEYRYTYSNGDEVEYIVVVFECEVTSG----ELRSIDGESLKLQYFSLSEKP 133 (153)
T ss_dssp HHHHHHHHHHHCEEE--EEEEEEEEECSGGGEEECTTSCEEEEEEEEEEEEEEEE----CCC-------CEEEECGGGCC
T ss_pred HHHHHHHHHHHCccc--eeeeEEEEecccceeeecCCCCeEEEEEEEEEEEecCC----ccccCCCcEEEEEEECHHHCc
Confidence 999999999999999 666655543 111111 123456777775432 122356788899999999998
Q ss_pred HHhh
Q psy11834 198 EYLA 201 (230)
Q Consensus 198 ~~~~ 201 (230)
++..
T Consensus 134 ~l~~ 137 (153)
T 3eds_A 134 PLAL 137 (153)
T ss_dssp CBSS
T ss_pred hhcc
Confidence 8754
No 45
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.64 E-value=5.1e-16 Score=124.04 Aligned_cols=108 Identities=12% Similarity=0.072 Sum_probs=75.1
Q ss_pred ecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCH
Q psy11834 45 QHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSL 124 (230)
Q Consensus 45 ~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~ 124 (230)
++.++++++++ ++++||+| +.+ ...|+||||++|+|||+
T Consensus 5 ~~~~v~~vi~~--~~~vLL~~-------------r~~--------------------------~g~w~lPgG~ve~gEs~ 43 (159)
T 3f6a_A 5 RHFTVSVFIVC--KDKVLLHL-------------HKK--------------------------AKKMLPLGGHIEVNELP 43 (159)
T ss_dssp SCEEEEEEEEE--TTEEEEEE-------------CSS--------------------------SCCEECEEEECCTTCCH
T ss_pred ceEEEEEEEEE--CCEEEEEE-------------cCC--------------------------CCeEECCccCccCCCCH
Confidence 46677888886 68999999 543 23578999999999999
Q ss_pred HHHHHHHHHhhhCCccCCCceEEEE------------EEEcCC---------CccCeEEEEEEEEEcCcccccCCCCCCC
Q psy11834 125 AEIAREEVLEECGYDVPVEKLEKIQ------------TFRSGV---------GSAGDRQTLFFVEVTDDMKVNSGGGVDE 183 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l~~l~------------~~~~~~---------~~s~~~~~~y~a~~~~~~~~~~~~~~~~ 183 (230)
.+||+||++||||+.+ ..+..++ ..+..+ ........+|++..... ....+++
T Consensus 44 ~~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~ 117 (159)
T 3f6a_A 44 EEACIREAKEEAGLNV--TLYNPIDINLKKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSF----ETSPEIG 117 (159)
T ss_dssp HHHHHHHHHHHHCCCC--EECCCCCHHHHHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCS----CCCCCTT
T ss_pred HHHHHHHHHHHhCCCc--eecccccccccccccccccccccCccccccccCCCCceEEEEEEEEEeCCC----CcCCCCC
Confidence 9999999999999988 3333321 111111 11223446777775432 1122567
Q ss_pred ceEEEEEEcHHHHHHH
Q psy11834 184 ELIEVVEMGLEEAREY 199 (230)
Q Consensus 184 E~~~v~wv~~eE~~~~ 199 (230)
|..++.|++++++.++
T Consensus 118 E~~~~~W~~~~el~~~ 133 (159)
T 3f6a_A 118 ESKILKWYSKEDLKNA 133 (159)
T ss_dssp SCCCEEEECSSSSTTC
T ss_pred cccceEEeeHHHHhhC
Confidence 8889999999998865
No 46
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.63 E-value=6.9e-16 Score=129.51 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=79.7
Q ss_pred ecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCH
Q psy11834 45 QHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSL 124 (230)
Q Consensus 45 ~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~ 124 (230)
...+|.+++++ ++++||+| +.. ...|+||||++|+||++
T Consensus 67 ~~~~v~~vv~~--~~~vLLv~-------------r~~--------------------------~g~w~lPgG~ve~gEs~ 105 (205)
T 3q1p_A 67 PKVDIRAVVFQ--NEKLLFVK-------------EKS--------------------------DGKWALPGGWADVGYTP 105 (205)
T ss_dssp CEEEEEEEEEE--TTEEEEEE-------------C-----------------------------CCEECSEEECCTTCCH
T ss_pred CcceEEEEEEE--CCEEEEEE-------------EcC--------------------------CCcEECCcCccCCCCCH
Confidence 34566667776 68999999 431 23588999999999999
Q ss_pred HHHHHHHHHhhhCCccCCCceEEEEEEEcC----CC-ccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHH
Q psy11834 125 AEIAREEVLEECGYDVPVEKLEKIQTFRSG----VG-SAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREY 199 (230)
Q Consensus 125 ~eAA~REl~EETGl~v~~~~l~~l~~~~~~----~~-~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~ 199 (230)
.+||.||++||||+.+ .....++.+... ++ .......+|.+...... .. .+.|..++.|++++++..+
T Consensus 106 ~~aa~REl~EEtGl~v--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 106 TEVAAKEVFEETGYEV--DHFKLLAIFDKEKHQPSPSATHVYKIFIGCEIIGGE----KK-TSIETEEVEFFGENELPNL 178 (205)
T ss_dssp HHHHHHHHHHHHSEEE--EEEEEEEEEEHHHHSCCCCSSCEEEEEEEEEEEEEC----CC-CCTTSCCEEEECTTSCCCB
T ss_pred HHHHHHHHHHHHCCcc--ccceEEEEEeccccCCCCCCceEEEEEEEEEecCCc----cC-CCCcceEEEEEeHHHhhhc
Confidence 9999999999999999 555555554321 22 23344556666654221 11 2378889999999999887
Q ss_pred hhcCCCC
Q psy11834 200 LAQDEVR 206 (230)
Q Consensus 200 ~~~~~~~ 206 (230)
.......
T Consensus 179 ~~~~~~~ 185 (205)
T 3q1p_A 179 SIARNTE 185 (205)
T ss_dssp CTTTCCH
T ss_pred CCCccHH
Confidence 6665543
No 47
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.63 E-value=2.3e-15 Score=117.29 Aligned_cols=79 Identities=19% Similarity=0.224 Sum_probs=59.3
Q ss_pred EEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCC--ccCeEEEEEEEEEcCcccccCCCCCCCceEEE
Q psy11834 111 LEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVG--SAGDRQTLFFVEVTDDMKVNSGGGVDEELIEV 188 (230)
Q Consensus 111 ~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~--~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v 188 (230)
|+||||++++|||+.+||+||++||||+.+ .....++.+..... ......++|.+... . . ...++|..++
T Consensus 39 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~----~-~~~~~e~~~~ 110 (139)
T 2yyh_A 39 LALPGGFVEVGERVEEAAAREMREETGLEV--RLHKLMGVYSDPERDPRAHVVSVVWIGDAQ-G----E-PKAGSDAKKV 110 (139)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHCCCC--EEEEEEEEECCTTSCTTSCEEEEEEEEEEE-S----C-CCCCTTEEEE
T ss_pred EECccccCCCCCCHHHHHHHHHHHHHCCCc--ccceEEEEECCCCcCCCceEEEEEEEEecC-C----c-cCCCCCcceE
Confidence 899999999999999999999999999998 55555554433211 13345677888763 1 1 1245688999
Q ss_pred EEEcHHHHH
Q psy11834 189 VEMGLEEAR 197 (230)
Q Consensus 189 ~wv~~eE~~ 197 (230)
.|++++++.
T Consensus 111 ~W~~~~el~ 119 (139)
T 2yyh_A 111 KVYRLEEIP 119 (139)
T ss_dssp EEECTTSCC
T ss_pred EEEEHHHCC
Confidence 999999988
No 48
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.63 E-value=2.6e-15 Score=121.59 Aligned_cols=113 Identities=14% Similarity=0.153 Sum_probs=80.4
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+.+|++++++. ++++||++ +.+ ...|++|||++++||++.
T Consensus 8 ~~~v~~~i~~~-~~~vLl~~-------------r~~--------------------------~~~w~~p~G~~e~gE~~~ 47 (164)
T 2kdv_A 8 RPNVGIVICNR-QGQVMWAR-------------RFG--------------------------QHSWQFPQGGINPGESAE 47 (164)
T ss_dssp EEEEEEEEECT-TSEEEEEE-------------ETT--------------------------CCCEECCEEECCTTCCHH
T ss_pred CcEEEEEEEcc-CCEEEEEE-------------EcC--------------------------CCeEECCeeecCCCCCHH
Confidence 56788888874 68999998 543 135889999999999999
Q ss_pred HHHHHHHHhhhCCccCCCceEEEEEE-----EcCCC----------ccCeEEEEEEEEEcCcc-cccCCCCCCCceEEEE
Q psy11834 126 EIAREEVLEECGYDVPVEKLEKIQTF-----RSGVG----------SAGDRQTLFFVEVTDDM-KVNSGGGVDEELIEVV 189 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~l~~l~~~-----~~~~~----------~s~~~~~~y~a~~~~~~-~~~~~~~~~~E~~~v~ 189 (230)
+||.||++||||+.+ ..+..++.+ +..+. ..+...++|++...... .+......+.|+.++.
T Consensus 48 ~aa~RE~~EE~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~ 125 (164)
T 2kdv_A 48 QAMYRELFEEVGLSR--KDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWR 125 (164)
T ss_dssp HHHHHHHHHHHCCCG--GGEEEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEE
T ss_pred HHHHHHHHHHHCCCc--cceEEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEE
Confidence 999999999999999 667766653 22221 12335678888875432 1111111356899999
Q ss_pred EEcHHHHHHHh
Q psy11834 190 EMGLEEAREYL 200 (230)
Q Consensus 190 wv~~eE~~~~~ 200 (230)
|++++++.+.+
T Consensus 126 W~~~~e~~~~l 136 (164)
T 2kdv_A 126 WVSYWYPVRQV 136 (164)
T ss_dssp EEETTTGGGGS
T ss_pred EecHHHhhhhh
Confidence 99999886643
No 49
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.63 E-value=1.4e-15 Score=124.50 Aligned_cols=84 Identities=18% Similarity=0.191 Sum_probs=60.8
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCc--cCeEEEEEEEEEcCcccccCCCCCCCce
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGS--AGDRQTLFFVEVTDDMKVNSGGGVDEEL 185 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~--s~~~~~~y~a~~~~~~~~~~~~~~~~E~ 185 (230)
+..|+||||++|+||++.+||+||++||||+.+ ..+..++.+...... .....++|.+.... +.....|.
T Consensus 49 ~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~------~~~~~~e~ 120 (176)
T 3q93_A 49 AGRWNGFGGKVQEGETIEDGARRELQEESGLTV--DALHKVGQIVFEFVGEPELMDVHVFCTDSIQ------GTPVESDE 120 (176)
T ss_dssp TTSEECEEEECCTTSCHHHHHHHHHHHHHSCEE--SCCEEEEEEEEEETTCSCEEEEEEEEESCEE------SCCCCCSS
T ss_pred CCeEECceecCCCCCCHHHHHHHHHHHHHCCcc--eeeEEEEEEEEEcCCCCcEEEEEEEEEECCC------CCcCCCcc
Confidence 456899999999999999999999999999999 677777664332222 22344666665321 12234566
Q ss_pred EEEEEEcHHHHHHH
Q psy11834 186 IEVVEMGLEEAREY 199 (230)
Q Consensus 186 ~~v~wv~~eE~~~~ 199 (230)
.++.|++++++..+
T Consensus 121 ~~~~W~~~~el~~~ 134 (176)
T 3q93_A 121 MRPCWFQLDQIPFK 134 (176)
T ss_dssp EEEEEEETTCCCGG
T ss_pred eeeEEeeHHHcccc
Confidence 78899999998865
No 50
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.61 E-value=3.7e-15 Score=117.98 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=69.5
Q ss_pred EEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcC-CCccCeEEEEEEEEEcCcccccCCCCCCCceEEEE
Q psy11834 111 LEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSG-VGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVV 189 (230)
Q Consensus 111 ~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~-~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~ 189 (230)
|++|||++++||++.+||+||++||||+.+ .....++.+... ........++|.+..... .....|..++.
T Consensus 38 w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~~~~ 109 (155)
T 2b06_A 38 YAFPGGHVENDEAFAESVIREIYEETGLTI--QNPQLVGIKNWPLDTGGRYIVICYKATEFSG------TLQSSEEGEVS 109 (155)
T ss_dssp EECCCCBCCTTSCHHHHHHHHHHHHHSEEE--ESCEEEEEEEEECTTSCEEEEEEEEECEEEE------CCCCBTTBEEE
T ss_pred EeccceecCCCCCHHHHHHHHHHHHhCccc--cCCcEEEEEeeccCCCceEEEEEEEEEecCC------CCCCCcceeeE
Confidence 789999999999999999999999999999 444444432221 122344556676654321 12235677899
Q ss_pred EEcHHHHHHHhhcCCCCChHHHHHHHHHHHHhhcCCceec
Q psy11834 190 EMGLEEAREYLAQDEVRSPSGFLFAMHWFLAAKAGQYVWR 229 (230)
Q Consensus 190 wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 229 (230)
|++++++.++.... ...-.+..++.++...+.|.
T Consensus 110 W~~~~el~~~~~~~------~~~~~l~~~~~~~~~~~~~~ 143 (155)
T 2b06_A 110 WVQKDQIPNLNLAY------DMLPLMEMMEAPDKSEFFYP 143 (155)
T ss_dssp EEEGGGGGGSCBCT------THHHHHHHHHCTTCCEEECC
T ss_pred EeeHHHhhhCCCCh------hHHHHHHHHhCCCceeeEec
Confidence 99999998764432 22223445666666555543
No 51
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.60 E-value=2.1e-15 Score=132.65 Aligned_cols=86 Identities=20% Similarity=0.159 Sum_probs=66.1
Q ss_pred cEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEE
Q psy11834 109 VTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEV 188 (230)
Q Consensus 109 ~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v 188 (230)
..|++|||++|+|||+++||+||++||||+.+ ..+.+++.+... ..+....+|++..... ....+++|+.++
T Consensus 164 g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v--~~~~~~~~~~~~--~~~~~~~~f~a~~~~~----~~~~~~~E~~~~ 235 (269)
T 1vk6_A 164 GVHTVLAGFVEVGETLEQAVAREVMEESGIKV--KNLRYVTSQPWP--FPQSLMTAFMAEYDSG----DIVIDPKELLEA 235 (269)
T ss_dssp SCCBCEEEECCTTCCHHHHHHHHHHHHHCCEE--EEEEEEEEEEEE--TTEEEEEEEEEEEEEC----CCCCCTTTEEEE
T ss_pred CcEECCcCcCCCCCCHHHHHHHHHHHHhCcee--eeEEEEEEEecC--CCCEEEEEEEEEECCC----CcCCCCcceEEE
Confidence 35789999999999999999999999999999 778777765432 2334667788876432 122356789999
Q ss_pred EEEcHHHHHHHhhc
Q psy11834 189 VEMGLEEAREYLAQ 202 (230)
Q Consensus 189 ~wv~~eE~~~~~~~ 202 (230)
.|++++++..+...
T Consensus 236 ~W~~~~el~~l~~~ 249 (269)
T 1vk6_A 236 NWYRYDDLPLLPPP 249 (269)
T ss_dssp EEEETTSCCSCCCT
T ss_pred EEEEHHHhhhcccC
Confidence 99999998765433
No 52
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.60 E-value=1.5e-16 Score=121.48 Aligned_cols=85 Identities=15% Similarity=0.112 Sum_probs=60.4
Q ss_pred CCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceE
Q psy11834 107 LGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELI 186 (230)
Q Consensus 107 ~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~ 186 (230)
.+..|+||||++++||++.+||.||++||||+.+ ..+..++.+.+........+++|.+..... .....|..
T Consensus 29 ~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~ 100 (129)
T 1mut_A 29 MANKLEFPGGKIEMGETPEQAVVRELQEEVGITP--QHFSLFEKLEYEFPDRHITLWFWLVERWEG------EPWGKEGQ 100 (129)
T ss_dssp SSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSS--CEECCCCCCBCCCSSCEEECCCEEEEECSS------CCCCCSSC
T ss_pred CCCeEECCccCcCCCCCHHHHHHHHHHHHhCCcc--ccceEEEEEEEecCCceEEEEEEEEEccCC------ccCCcccc
Confidence 3567999999999999999999999999999998 544444443332222223446777775422 12345677
Q ss_pred EEEEEcHHHHHHH
Q psy11834 187 EVVEMGLEEAREY 199 (230)
Q Consensus 187 ~v~wv~~eE~~~~ 199 (230)
++.|++++++.++
T Consensus 101 ~~~W~~~~el~~~ 113 (129)
T 1mut_A 101 PGEWMSLVGLNAD 113 (129)
T ss_dssp CCEEEESSSCCTT
T ss_pred eeEEeCHHHcccc
Confidence 8999999998765
No 53
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.59 E-value=1.6e-15 Score=124.81 Aligned_cols=89 Identities=20% Similarity=0.170 Sum_probs=61.4
Q ss_pred CCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCc--cCeEEEEEEEEEcCcccccCCCCCCCc
Q psy11834 107 LGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGS--AGDRQTLFFVEVTDDMKVNSGGGVDEE 184 (230)
Q Consensus 107 ~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~--s~~~~~~y~a~~~~~~~~~~~~~~~~E 184 (230)
.+..|++|||++|+||++.+||+||++||||+.+ ..+..++.+...... ......+|++....... . .....+|
T Consensus 65 ~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~E 140 (187)
T 3i9x_A 65 EGGKWAVPGGFVDENESAEQAAERELEEETSLTD--IPLIPFGVFDKPGRDPRGWIISRAFYAIVPPEAL-E-KRAAGDD 140 (187)
T ss_dssp TTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCS--CCCEEEEEECCTTSSTTSSEEEEEEEEECCHHHH-H-HHHHSTT
T ss_pred CCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCC--cceEEEEEEcCCccCCCCCEEEEEEEEEEcCccc-C-CcCCCCc
Confidence 3567999999999999999999999999999988 777777665432211 12334556555432211 0 0112456
Q ss_pred eEEEEEEcHHHHHHH
Q psy11834 185 LIEVVEMGLEEAREY 199 (230)
Q Consensus 185 ~~~v~wv~~eE~~~~ 199 (230)
..++.|++++++..+
T Consensus 141 ~~~~~W~~~~el~~~ 155 (187)
T 3i9x_A 141 AAEIGLFPMTEALEL 155 (187)
T ss_dssp TTTEEEEEHHHHTTS
T ss_pred eeEEEEEeHHHcccC
Confidence 667999999999864
No 54
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.57 E-value=7.8e-15 Score=116.16 Aligned_cols=86 Identities=16% Similarity=0.127 Sum_probs=58.9
Q ss_pred EEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEE---EcCCCcc-CeEEEEEEEEEcCcccccCCCCCCCce
Q psy11834 110 TLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTF---RSGVGSA-GDRQTLFFVEVTDDMKVNSGGGVDEEL 185 (230)
Q Consensus 110 ~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~---~~~~~~s-~~~~~~y~a~~~~~~~~~~~~~~~~E~ 185 (230)
.|+||||++++||++.+||+||++||||+.+ .....++.+ +...+.. ....++|.+....... ....+++|.
T Consensus 40 ~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~~~~~e~ 115 (154)
T 2pqv_A 40 KYYTIGGAIQVNESTEDAVVREVKEELGVKA--QAGQLAFVVENRFEVDGVSYHNIEFHYLVDLLEDAP--LTMQEDEKR 115 (154)
T ss_dssp EEECEEEECBTTCCHHHHHHHHHHHHHCCCE--EEEEEEEEEEEEEEETTEEEEEEEEEEEEEESSCCC--SEEEETTEE
T ss_pred eEECcccCcCCCCCHHHHHHHHHHHHhCCee--eeceEEEEEeeeecCCCCcceEEEEEEEEEecCCCC--cccCCCCce
Confidence 5789999999999999999999999999998 444433322 2222221 2244577777543211 001145678
Q ss_pred EEEEEEcHHHHHHH
Q psy11834 186 IEVVEMGLEEAREY 199 (230)
Q Consensus 186 ~~v~wv~~eE~~~~ 199 (230)
.++.|++++++..+
T Consensus 116 ~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 116 QPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEEEEGGGGGGS
T ss_pred eeEEEeEHHHHhhc
Confidence 89999999999875
No 55
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.57 E-value=8.7e-15 Score=122.87 Aligned_cols=91 Identities=14% Similarity=0.146 Sum_probs=63.9
Q ss_pred cEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEE----cCCC-ccCeEEEEEEEEEcCcccccCCCCCCC
Q psy11834 109 VTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFR----SGVG-SAGDRQTLFFVEVTDDMKVNSGGGVDE 183 (230)
Q Consensus 109 ~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~----~~~~-~s~~~~~~y~a~~~~~~~~~~~~~~~~ 183 (230)
..|+||||++|+||++.+||.||++||||+.+ .....++.+. ..++ .......+|.+...... .. .+.
T Consensus 91 g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~ 163 (206)
T 3o8s_A 91 GLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDV--EAQRVVAILDKHKNNPAKSAHRVTKVFILCRLLGGE----FQ-PNS 163 (206)
T ss_dssp SCEECSEEECCTTSCHHHHHHHHHHHHHCEEE--EEEEEEEEEEHHHHCC-----CEEEEEEEEEEEEEC----CC-CCS
T ss_pred CeEECCeeccCCCCCHHHHHHHHHHHHHCCcc--eeeeEEEEEeccccCCCCCCceEEEEEEEEEecCCe----ec-CCC
Confidence 35789999999999999999999999999999 6666666554 2222 22334456666654221 11 237
Q ss_pred ceEEEEEEcHHHHHHHhhcCCCC
Q psy11834 184 ELIEVVEMGLEEAREYLAQDEVR 206 (230)
Q Consensus 184 E~~~v~wv~~eE~~~~~~~~~~~ 206 (230)
|..++.|++++++..+.....+.
T Consensus 164 E~~~~~w~~~~el~~l~~~~~~~ 186 (206)
T 3o8s_A 164 ETVASGFFSLDDLPPLYLGKNTA 186 (206)
T ss_dssp SCSEEEEECTTSCCCBCTTTCCH
T ss_pred CceEEEEEeHHHhhhccCCCchH
Confidence 88899999999998876655443
No 56
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.56 E-value=3.3e-14 Score=127.02 Aligned_cols=138 Identities=13% Similarity=0.075 Sum_probs=99.9
Q ss_pred ecCeEEEEEEEcCCC---EEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEE-EeeeeecCC
Q psy11834 45 QHKDYYIVMNKITEA---QIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTL-EFCAGIVDK 120 (230)
Q Consensus 45 ~~~~v~vl~~~~~~~---~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-elPgG~VE~ 120 (230)
.+.+|.+.+++. ++ ++++.| |.... ..| +..| ++|||++++
T Consensus 117 ~~~~vh~~~~~~-~~~~~~lll~r---------------Rs~~K---------------~~~----PG~wd~svaG~i~~ 161 (300)
T 3dup_A 117 RAYGVHLNGYVG-AGADLHLWIGR---------------RSPDK---------------SVA----PGKLDNMVAGGQPA 161 (300)
T ss_dssp CEEEEEEEEEES-CGGGCEEEEEE---------------ECTTC---------------SSS----TTCEEESEEEECCT
T ss_pred EEEEEEEEEEEe-cCCeeEEEEEe---------------CCCcc---------------cCC----CCccccccccCCCC
Confidence 367888888885 44 888877 44331 123 3456 699999999
Q ss_pred CCCHHHHHHHHHHhhhCCccCC-CceEEEEE--E--EcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHH
Q psy11834 121 NKSLAEIAREEVLEECGYDVPV-EKLEKIQT--F--RSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEE 195 (230)
Q Consensus 121 GEs~~eAA~REl~EETGl~v~~-~~l~~l~~--~--~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE 195 (230)
||++.+||+||+.||+|+.... ..+..++. | ..+.+...+.+++|.+.+..+. ....+++|+.++.|++++|
T Consensus 162 GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~---~p~~~~~EV~~~~~v~~~E 238 (300)
T 3dup_A 162 DLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDF---RPHNTDGEMADFMLWPAAK 238 (300)
T ss_dssp TSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEEECCTTC---CCCCTTSSEEEEEEEEHHH
T ss_pred CCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEEEecCCC---cCCCCchHhheEEEECHHH
Confidence 9999999999999999998731 13444433 2 2233455667788877754321 1234788999999999999
Q ss_pred HHHHhhc-CCCCChHHHHHHHHHHHHh
Q psy11834 196 AREYLAQ-DEVRSPSGFLFAMHWFLAA 221 (230)
Q Consensus 196 ~~~~~~~-~~~~~~~~~~~a~~~~~~~ 221 (230)
+.+++.+ ++++ |...++++.||+.+
T Consensus 239 l~~~l~~pg~F~-p~~~lV~ldfl~Rh 264 (300)
T 3dup_A 239 VVEAVRTTEAFK-FNVNLTVIDFAIRH 264 (300)
T ss_dssp HHHHHHHCCCBC-TTHHHHHHHHHHHT
T ss_pred HHHHHhcCCCcC-ccHHHHHHHHHHHh
Confidence 9999999 9997 46778888888876
No 57
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.55 E-value=1.4e-14 Score=119.87 Aligned_cols=86 Identities=15% Similarity=-0.026 Sum_probs=55.4
Q ss_pred cEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCcc---CeEEEEEEEEEcCcccccCCCCCCCce
Q psy11834 109 VTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSA---GDRQTLFFVEVTDDMKVNSGGGVDEEL 185 (230)
Q Consensus 109 ~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s---~~~~~~y~a~~~~~~~~~~~~~~~~E~ 185 (230)
..|++|||++++||++.+||+||++||||+.+....+..+..+....+.. ....++|.+..... . .....|.
T Consensus 26 g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~----~-~~~~~e~ 100 (188)
T 3fk9_A 26 GWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATEHEG----E-MLKQSPE 100 (188)
T ss_dssp CCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEEEEEEEEEESCEES----C-CCSEETT
T ss_pred CeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEEEEEEEEEEECCCC----C-CcCCCCC
Confidence 45899999999999999999999999999999433333333332221111 11445666653211 1 1122344
Q ss_pred EEEEEEcHHHHHHH
Q psy11834 186 IEVVEMGLEEAREY 199 (230)
Q Consensus 186 ~~v~wv~~eE~~~~ 199 (230)
.++.|++++++..+
T Consensus 101 ~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 101 GKLEWKKKDEVLEL 114 (188)
T ss_dssp EEEEEEEGGGGGGS
T ss_pred EeEEEEEHHHhhhC
Confidence 58999999998654
No 58
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.54 E-value=1.4e-14 Score=127.06 Aligned_cols=88 Identities=17% Similarity=0.212 Sum_probs=66.1
Q ss_pred CcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCc--cCeEEEEEEEEEcCcccccCCCCCCCce
Q psy11834 108 GVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGS--AGDRQTLFFVEVTDDMKVNSGGGVDEEL 185 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~--s~~~~~~y~a~~~~~~~~~~~~~~~~E~ 185 (230)
...|+||||++|+||++.+||.||++||||+.+....+..++.+...... .....++|++.+... . ...++|.
T Consensus 69 ~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~~~~~~~r~~~~~~~~~~y~a~~~~~----~-~~~~~E~ 143 (273)
T 2fml_A 69 RNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSRPDRDPRGWVVTVSYLAFIGEE----P-LIAGDDA 143 (273)
T ss_dssp TTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEEEECCTTSSTTSSEEEEEEEEECCCC----C-CCCCTTE
T ss_pred CCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEEEEcCCCCCCCceEEEEEEEEEeCCC----C-CCCCcce
Confidence 35689999999999999999999999999988755678888776543221 224556777765422 1 2356788
Q ss_pred EEEEEEcHHHHHHHh
Q psy11834 186 IEVVEMGLEEAREYL 200 (230)
Q Consensus 186 ~~v~wv~~eE~~~~~ 200 (230)
.++.|++++++.+++
T Consensus 144 ~~~~W~~~~e~~~~~ 158 (273)
T 2fml_A 144 KEVHWFNLERHGQHI 158 (273)
T ss_dssp EEEEEEEEEEETTEE
T ss_pred eeEEEEEhhHhhhhh
Confidence 999999999987766
No 59
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.53 E-value=4.8e-15 Score=125.33 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=63.5
Q ss_pred cEEEeeeeecCCCC-CHHHHHHHHHHhhhCCccCCCce---EEEEEEEcCCCccCeEEEEEEEEEcCccccc------CC
Q psy11834 109 VTLEFCAGIVDKNK-SLAEIAREEVLEECGYDVPVEKL---EKIQTFRSGVGSAGDRQTLFFVEVTDDMKVN------SG 178 (230)
Q Consensus 109 ~~~elPgG~VE~GE-s~~eAA~REl~EETGl~v~~~~l---~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~------~~ 178 (230)
..|+||||++|+|| ++.+||.||++||||+.+....+ ..++.+..... ....+++|++......... ..
T Consensus 66 g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~e~~~~~~ 144 (212)
T 1u20_A 66 GRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QKCVTHFYIKELKLEEIERIEAEAVNA 144 (212)
T ss_dssp SCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SCEEEEEEEEECCHHHHHHHHHHHTTS
T ss_pred CeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-CcEEEEEEEEEecCCCccccccccccc
Confidence 45899999999999 99999999999999999843322 24555544333 5667888988864321100 11
Q ss_pred CCCCCceEEEEEEcHHHHHH
Q psy11834 179 GGVDEELIEVVEMGLEEARE 198 (230)
Q Consensus 179 ~~~~~E~~~v~wv~~eE~~~ 198 (230)
..++.|..++.|+|++++.+
T Consensus 145 ~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 145 KDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp TTBTTTEEEEEECCCSBCTT
T ss_pred ccCCcceEEEEEEEHHHhhh
Confidence 12467899999999998854
No 60
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.53 E-value=1.2e-13 Score=112.24 Aligned_cols=72 Identities=8% Similarity=0.160 Sum_probs=54.0
Q ss_pred EEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEE
Q psy11834 110 TLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVV 189 (230)
Q Consensus 110 ~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~ 189 (230)
.|++|||++++||++.+||+||++||||+.+ ..+..++.+.... ...++|++...+ ... ..+|+.++.
T Consensus 38 ~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~--~~~~~l~~~~~~~----~~~~~f~~~~~~-----~~~-~~~E~~~~~ 105 (163)
T 3f13_A 38 RYNLPGGKANRGELRSQALIREIREETGLRI--NSMLYLFDHITPF----NAHKVYLCIAQG-----QPK-PQNEIERIA 105 (163)
T ss_dssp -BBCSEEECCTTCCHHHHHHHHHHHHHCCCC--CEEEEEEEEECSS----EEEEEEEEEC-C-----CCC-CCTTCCEEE
T ss_pred eEECCceeCCCCCCHHHHHHHHHHHHHCccc--ceeEEEEEEecCC----eEEEEEEEEECC-----cCc-cCCCceEEE
Confidence 5789999999999999999999999999999 7777776654432 566778886431 111 223788999
Q ss_pred EEcH
Q psy11834 190 EMGL 193 (230)
Q Consensus 190 wv~~ 193 (230)
|++.
T Consensus 106 W~~~ 109 (163)
T 3f13_A 106 LVSS 109 (163)
T ss_dssp EESS
T ss_pred EECc
Confidence 9983
No 61
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.53 E-value=6.5e-14 Score=120.70 Aligned_cols=118 Identities=12% Similarity=0.131 Sum_probs=83.2
Q ss_pred ecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEee-eeecCCC--
Q psy11834 45 QHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFC-AGIVDKN-- 121 (230)
Q Consensus 45 ~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elP-gG~VE~G-- 121 (230)
.|.+++|++++ .++++||.| |.... .. .+..|++| ||++++|
T Consensus 58 ~h~av~v~v~~-~~g~lLLq~---------------R~~~k---------------~~----~pg~W~~p~gG~v~~Ge~ 102 (235)
T 2dho_A 58 LHRAFSVFLFN-TENKLLLQQ---------------RSDAK---------------IT----FPGCFTNTCCSHPLSNPA 102 (235)
T ss_dssp CEEEEEEEEEC-TTCCEEEEE---------------ECTTC---------------SS----STTCEESSEEECCBSSHH
T ss_pred eEEEEEEEEEc-CCCEEEEEE---------------ecCcC---------------CC----CCCcEEeccCceecCCCc
Confidence 36788998887 477899877 43220 00 23568898 5999999
Q ss_pred ----CC---HHHHHHHHHHhhhCCccC---CCceEEEEEEEc-CC---C-ccCeEEEEEEEEEcCcccccCCCCCCCceE
Q psy11834 122 ----KS---LAEIAREEVLEECGYDVP---VEKLEKIQTFRS-GV---G-SAGDRQTLFFVEVTDDMKVNSGGGVDEELI 186 (230)
Q Consensus 122 ----Es---~~eAA~REl~EETGl~v~---~~~l~~l~~~~~-~~---~-~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~ 186 (230)
|+ +.+||+||++||||+.+. ...+..++.+.. .+ + ..++.+++|++..+. ....+++|..
T Consensus 103 E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~-----~~~~~~~Ev~ 177 (235)
T 2dho_A 103 ELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNV-----TLNPDPNEIK 177 (235)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCC-----CCCCCTTTEE
T ss_pred ccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECC-----CCcCChHHEE
Confidence 88 499999999999999862 124677776432 11 1 123456788887421 2234678999
Q ss_pred EEEEEcHHHHHHHhhc
Q psy11834 187 EVVEMGLEEAREYLAQ 202 (230)
Q Consensus 187 ~v~wv~~eE~~~~~~~ 202 (230)
++.|++++++.+++.+
T Consensus 178 ~~~wv~~~el~~~l~~ 193 (235)
T 2dho_A 178 SYCYVSKEELKELLKK 193 (235)
T ss_dssp EEEEECHHHHHHHHHH
T ss_pred EEEEEcHHHHHHHHhh
Confidence 9999999999999987
No 62
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.53 E-value=6.1e-15 Score=126.01 Aligned_cols=113 Identities=10% Similarity=0.067 Sum_probs=77.7
Q ss_pred cCeEEEEEEE--cCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCC
Q psy11834 46 HKDYYIVMNK--ITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKS 123 (230)
Q Consensus 46 ~~~v~vl~~~--~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs 123 (230)
.-+|.++++. ..+++|||++ +.+.+ ....|++|||++|+|||
T Consensus 13 ~v~v~~vi~~~~~~~~~vLLv~-------------r~~~~-----------------------~~g~w~lPGG~ve~gEs 56 (226)
T 2fb1_A 13 YLGIDCIIFGFNEGEISLLLLK-------------RNFEP-----------------------AMGEWSLMGGFVQKDES 56 (226)
T ss_dssp EEEEEEEEEEEETTEEEEEEEE-------------CSSSS-----------------------STTCEECEEEECCTTSC
T ss_pred eEEEEEEEEEEeCCCCEEEEEE-------------CcCCC-----------------------CCCCEECCeeccCCCCC
Confidence 3456666663 3467999999 55432 23468999999999999
Q ss_pred HHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCc--cCeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHh
Q psy11834 124 LAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGS--AGDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYL 200 (230)
Q Consensus 124 ~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~--s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~ 200 (230)
+.+||+||++||||+.+ ..+..++.+...... .......|++.+... .....+.|..++.|++++++.++.
T Consensus 57 ~~~Aa~REl~EEtGl~~--~~~~~l~~~~~~~r~~~~~~v~~~y~a~~~~~----~~~~~~~e~~~~~W~~~~el~~l~ 129 (226)
T 2fb1_A 57 VDDAAKRVLAELTGLEN--VYMEQVGAFGAIDRDPGERVVSIAYYALININ----EYDRELVQKHNAYWVNINELPALI 129 (226)
T ss_dssp HHHHHHHHHHHHHCCCS--CEEEEEEEECCTTSSSSSCEEEEEEEEECCTT----SSCHHHHHHTTEEEEETTSCCCBS
T ss_pred HHHHHHHHHHHHHCCCC--CceEEEEEeCCCCcCCCceEEEEEEEEEecCc----ccccCCccccceEEEEHHHhhhcc
Confidence 99999999999999998 777777776532211 122334567764321 111134567789999999987543
No 63
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.52 E-value=2.2e-14 Score=113.95 Aligned_cols=85 Identities=12% Similarity=0.032 Sum_probs=59.0
Q ss_pred CCcEEEeeeeecCCCCCHH-HHHHHHHHhhhC-CccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCc
Q psy11834 107 LGVTLEFCAGIVDKNKSLA-EIAREEVLEECG-YDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEE 184 (230)
Q Consensus 107 ~~~~~elPgG~VE~GEs~~-eAA~REl~EETG-l~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E 184 (230)
.+..|+||||.+++||++. +||.||+.|||| +.+ ..+..++.+.+........+++|.+..... .....|
T Consensus 47 ~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e 118 (155)
T 1x51_A 47 LAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPA--THLRHLGEVVHTFSHIKLTYQVYGLALEGQ------TPVTTV 118 (155)
T ss_dssp TCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCS--TTCEECCCBCCBCSSCEEEEEEEEEECSSC------CCCCCC
T ss_pred CCceecCCccccCCCCCHHHHHHHHHHHHHhCCcce--eeeeecceEEEecCCccEEEEEEEEEEcCC------CCCCCC
Confidence 3567999999999999996 999999999999 877 555555544333222223456777764321 112234
Q ss_pred eEEEEEEcHHHHHHH
Q psy11834 185 LIEVVEMGLEEAREY 199 (230)
Q Consensus 185 ~~~v~wv~~eE~~~~ 199 (230)
..++.|++++++.++
T Consensus 119 ~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 119 PPGARWLTQEEFHTA 133 (155)
T ss_dssp CTTEEEEEHHHHHHS
T ss_pred CCccEEccHHHhhhc
Confidence 456899999999874
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.51 E-value=1.6e-13 Score=121.95 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=71.7
Q ss_pred CeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHHH
Q psy11834 47 KDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLAE 126 (230)
Q Consensus 47 ~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~e 126 (230)
.+|++++++ ++++||+| +.+.+ .+..|++|||++|+||++.+
T Consensus 204 ~~v~~vi~~--~~~vLL~~-------------r~~~~-----------------------~~g~w~lPgG~ve~gE~~~~ 245 (341)
T 2qjo_A 204 ITTDAVVVQ--AGHVLMVR-------------RQAKP-----------------------GLGLIALPGGFIKQNETLVE 245 (341)
T ss_dssp EEEEEEEEE--TTEEEEEE-------------CCSSS-----------------------STTCEECSEEECCTTSCHHH
T ss_pred eEEEEEEEe--CCEEEEEE-------------ecCCC-----------------------CCCeEECCCCcCCCCCCHHH
Confidence 456666664 78999999 54321 24568999999999999999
Q ss_pred HHHHHHHhhhCCccCCCc----eEEEEEEEcCCCcc---CeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHH
Q psy11834 127 IAREEVLEECGYDVPVEK----LEKIQTFRSGVGSA---GDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREY 199 (230)
Q Consensus 127 AA~REl~EETGl~v~~~~----l~~l~~~~~~~~~s---~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~ 199 (230)
||+||++||||+.+.... +..... +..++.. ....++|++...... . ....+++|+.++.|++++++.++
T Consensus 246 aa~REl~EEtGl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~~~~~~~-~-~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 246 GMLRELKEETRLKVPLPVLRGSIVDSHV-FDAPGRSLRGRTITHAYFIQLPGGE-L-PAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp HHHHHHHHHHCCSSCHHHHHHTEEEEEE-ECCTTSCTTSCEEEEEEEEECCSSS-C-CCCC------CEEEEEHHHHHHT
T ss_pred HHHHHHhhhhCCccccccccccccceEE-EeCCCCCCCCcEEEEEEEEEecCCC-c-CccCCCCceeeEEEeeHHHHhhh
Confidence 999999999999984222 222222 3323221 234567888754321 0 11135678889999999999985
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.51 E-value=1.1e-13 Score=123.76 Aligned_cols=114 Identities=8% Similarity=0.012 Sum_probs=77.5
Q ss_pred cCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeeeeecCCCCCHH
Q psy11834 46 HKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCAGIVDKNKSLA 125 (230)
Q Consensus 46 ~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPgG~VE~GEs~~ 125 (230)
+.++++++++ ++++||+| +.+.+ .+..|++|||++|+|||+.
T Consensus 208 ~~~v~~vv~~--~~~vLL~~-------------r~~~~-----------------------~~g~w~lPgG~ve~gEt~~ 249 (352)
T 2qjt_B 208 FVTVDALVIV--NDHILMVQ-------------RKAHP-----------------------GKDLWALPGGFLECDETIA 249 (352)
T ss_dssp EEEEEEEEEE--TTEEEEEE-------------ESSSS-----------------------STTCEECSEEECCTTSCHH
T ss_pred ceEEEEEEEE--CCEEEEEE-------------EcCCC-----------------------CCCeEECCCCcCCCCCCHH
Confidence 4566777764 78999999 54422 2356899999999999999
Q ss_pred HHHHHHHHhhhCCccCCCc----eEEEEEEEcCCCcc---CeEEEEEEEEEcCcccccCCCCCCCceEEEEEEcH-HHHH
Q psy11834 126 EIAREEVLEECGYDVPVEK----LEKIQTFRSGVGSA---GDRQTLFFVEVTDDMKVNSGGGVDEELIEVVEMGL-EEAR 197 (230)
Q Consensus 126 eAA~REl~EETGl~v~~~~----l~~l~~~~~~~~~s---~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~-eE~~ 197 (230)
+||.||++||||+.+.... +.... .+..++.. ....++|++....... .....+++|+.++.|+++ +++.
T Consensus 250 ~aa~REl~EEtGl~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~~~~E~~~~~W~~~~~el~ 327 (352)
T 2qjt_B 250 QAIIRELFEETNINLTHEQLAIAKRCEK-VFDYPDRSVRGRTISHVGLFVFDQWPS-LPEINAADDAKDVKWISLGSNIK 327 (352)
T ss_dssp HHHHHHHHHHHCCSCCHHHHHHHEEEEE-EECCTTSCTTSEEEEEEEEEEECSCSS-CCCCCCCTTEEEEEEEESSHHHH
T ss_pred HHHHHHHHHhhCCCcccchhcceeeeeE-EecCCCCCCCccEEEEEEEEEEeCCCC-CCccCCCccceEEEEecHHHHHH
Confidence 9999999999999984222 22222 23333221 1355677787643210 011124678999999999 9999
Q ss_pred HH
Q psy11834 198 EY 199 (230)
Q Consensus 198 ~~ 199 (230)
++
T Consensus 328 ~~ 329 (352)
T 2qjt_B 328 NI 329 (352)
T ss_dssp HT
T ss_pred hh
Confidence 86
No 66
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.51 E-value=1.3e-13 Score=124.99 Aligned_cols=93 Identities=16% Similarity=0.171 Sum_probs=64.7
Q ss_pred cEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEc--CC-C----------ccCeEEEEEEEEEcCccc-
Q psy11834 109 VTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRS--GV-G----------SAGDRQTLFFVEVTDDMK- 174 (230)
Q Consensus 109 ~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~--~~-~----------~s~~~~~~y~a~~~~~~~- 174 (230)
..|+||||++|+||++.+||+||++||||+.+ .....++.+.. .. + .....+++|++.......
T Consensus 49 g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~--~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 126 (364)
T 3fjy_A 49 DDWSWPKGKLEQNETHRHAAVREIGEETGSPV--KLGPYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDA 126 (364)
T ss_dssp TEEECCEEECCTTCCHHHHHHHHHHHHHSCCE--EEEEEEEEEC---------------------CEEEEEEEECCHHHH
T ss_pred CCEECCcCCCCCCCCHHHHHHHHHHHHhCCee--eeccccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccc
Confidence 56899999999999999999999999999998 55555553222 11 1 123567788888654321
Q ss_pred ------ccCC-CCCCCceEEEEEEcHHHHHHHhhcC
Q psy11834 175 ------VNSG-GGVDEELIEVVEMGLEEAREYLAQD 203 (230)
Q Consensus 175 ------~~~~-~~~~~E~~~v~wv~~eE~~~~~~~~ 203 (230)
..+. ..+++|+.++.|++++++.+++...
T Consensus 127 ~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 162 (364)
T 3fjy_A 127 EHLLDAFGPVHRADVGEINDIVWVSVREARKILSHS 162 (364)
T ss_dssp HTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCH
T ss_pred cccccccCccccCCccceeeeecCcHHHHHHHhcch
Confidence 1111 2356789999999999999987543
No 67
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.51 E-value=9.1e-14 Score=120.66 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=82.9
Q ss_pred ecCeEEEEEEEcCCCEEEEEEecCCcCCccccceecccceeccCCcccccCCccccccCCCCCCcEEEeee-eecCCC--
Q psy11834 45 QHKDYYIVMNKITEAQIIETRSSQFIQPYSVKFVQVLLSVYINSIPEEDRTGSIDVTKYPAELGVTLEFCA-GIVDKN-- 121 (230)
Q Consensus 45 ~~~~v~vl~~~~~~~~vll~r~~~~~~~~~~~~~q~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elPg-G~VE~G-- 121 (230)
.|.+++|++++ .++++||.| |.... .. .+..|++|+ |++++|
T Consensus 69 ~h~av~v~v~~-~~g~lLLqr---------------Rs~~K---------------~~----~pG~W~~p~gG~v~~G~~ 113 (246)
T 2pny_A 69 LHRAFSVVLFN-TKNRILIQQ---------------RSDTK---------------VT----FPGYFTDSCSSHPLYNPA 113 (246)
T ss_dssp CEEEEEEEEEC-TTCCEEEEE---------------ECTTC---------------SS----STTCBCCSEEECCBSSHH
T ss_pred EEEEEEEEEEe-CCCEEEEEE---------------ecCCC---------------CC----CCCceEeccCceeccCCc
Confidence 36788998887 477898877 43220 01 234577885 999999
Q ss_pred ----CCH---HHHHHHHHHhhhCCccC---CCceEEEEEEEc-CC---C-ccCeEEEEEEEEEcCcccccCCCCCCCceE
Q psy11834 122 ----KSL---AEIAREEVLEECGYDVP---VEKLEKIQTFRS-GV---G-SAGDRQTLFFVEVTDDMKVNSGGGVDEELI 186 (230)
Q Consensus 122 ----Es~---~eAA~REl~EETGl~v~---~~~l~~l~~~~~-~~---~-~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~ 186 (230)
|++ .+||+||++||||+.+. ...+.+++.+.. .+ + ..++.+++|++..+. ....+++|+.
T Consensus 114 E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~-----~~~~~~~Ev~ 188 (246)
T 2pny_A 114 ELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNV-----TLNPDPSETK 188 (246)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCC-----CCCCCTTTEE
T ss_pred ccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECC-----CCCCChHHee
Confidence 887 99999999999999862 124677766432 11 1 123456788887421 2234678999
Q ss_pred EEEEEcHHHHHHHhhc
Q psy11834 187 EVVEMGLEEAREYLAQ 202 (230)
Q Consensus 187 ~v~wv~~eE~~~~~~~ 202 (230)
++.|++++++.+++.+
T Consensus 189 ~~~wv~~eel~~~l~~ 204 (246)
T 2pny_A 189 SILYLSQEELWELLER 204 (246)
T ss_dssp EEEEECHHHHHHHHHH
T ss_pred EEEEEeHHHHHHHHHh
Confidence 9999999999999988
No 68
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=4.3e-13 Score=115.66 Aligned_cols=110 Identities=17% Similarity=0.137 Sum_probs=80.1
Q ss_pred CcEEEeeeeecCCCCC--------------------HHHHHHHHHHhhhCCccCC-------------------------
Q psy11834 108 GVTLEFCAGIVDKNKS--------------------LAEIAREEVLEECGYDVPV------------------------- 142 (230)
Q Consensus 108 ~~~~elPgG~VE~GEs--------------------~~eAA~REl~EETGl~v~~------------------------- 142 (230)
+..|.||||++|++|+ +..||+||++||||+.+..
T Consensus 39 ~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~ 118 (232)
T 3qsj_A 39 PGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGD 118 (232)
T ss_dssp TTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTT
T ss_pred CCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCch
Confidence 4568899999999887 5899999999999996521
Q ss_pred ---------------CceEEEEEEEcCCCccCeE-EEEEEEEEcCcccccCCCCCCCceEEEEEEcHHHHHHHhhcCCCC
Q psy11834 143 ---------------EKLEKIQTFRSGVGSAGDR-QTLFFVEVTDDMKVNSGGGVDEELIEVVEMGLEEAREYLAQDEVR 206 (230)
Q Consensus 143 ---------------~~l~~l~~~~~~~~~s~~~-~~~y~a~~~~~~~~~~~~~~~~E~~~v~wv~~eE~~~~~~~~~~~ 206 (230)
..|.......+.++...-. .++|++... . ......+..|..++.|++++++.+...+|++.
T Consensus 119 ~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lp-q--~~~v~~d~~E~~~~~W~~p~eal~~~~~G~i~ 195 (232)
T 3qsj_A 119 ALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQ-H--LGEPRLHGAELDAALWTPARDMLTRIQSGELP 195 (232)
T ss_dssp HHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECS-S--CCCCCCCSSSEEEEEEEEHHHHHHHHHTTSSC
T ss_pred hHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECC-C--CCCCCCCCCceEEEEEEcHHHHHHHHHcCCce
Confidence 1234455555555544433 345555543 1 11113478999999999999999999999998
Q ss_pred ChHHHHHHHHHHHH
Q psy11834 207 SPSGFLFAMHWFLA 220 (230)
Q Consensus 207 ~~~~~~~a~~~~~~ 220 (230)
.++.+.+-|..+..
T Consensus 196 L~pPT~~~L~~L~~ 209 (232)
T 3qsj_A 196 AVRPTIAVLKALVA 209 (232)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred echhHHHHHHHHHc
Confidence 88888888766554
No 69
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.50 E-value=6.6e-14 Score=111.64 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=30.2
Q ss_pred EEEeeeeecCCCCCHHHHHHHHHHhhhCCccC
Q psy11834 110 TLEFCAGIVDKNKSLAEIAREEVLEECGYDVP 141 (230)
Q Consensus 110 ~~elPgG~VE~GEs~~eAA~REl~EETGl~v~ 141 (230)
.|++|||++|+||++.+||.||++||||+.+.
T Consensus 24 ~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 55 (156)
T 1k2e_A 24 VYIYPGGHVEHNETPIEAVKREFEEETGIVVE 55 (156)
T ss_dssp SEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred cEECCeeecCCCCCHHHHHHHHHHHHHCCcce
Confidence 48899999999999999999999999999884
No 70
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.48 E-value=5.7e-14 Score=121.07 Aligned_cols=85 Identities=11% Similarity=0.025 Sum_probs=61.1
Q ss_pred CcEEEeeeeecCC--CCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCC--ccCeEEEEEEEEEcCcccccCCCCCCC
Q psy11834 108 GVTLEFCAGIVDK--NKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVG--SAGDRQTLFFVEVTDDMKVNSGGGVDE 183 (230)
Q Consensus 108 ~~~~elPgG~VE~--GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~--~s~~~~~~y~a~~~~~~~~~~~~~~~~ 183 (230)
...|++|||++++ |||+.+||+||++||||+.+ ..+..++.+..... ........|++.+...... ...+
T Consensus 50 ~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~--~~~~~l~~~~~~~r~~~~~~~~~~y~a~~~~~~~~----~~~~ 123 (240)
T 3gz5_A 50 LGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVP--PYIEQLCTVGNNSRDARGWSVTVCYTALMSYQACQ----IQIA 123 (240)
T ss_dssp TTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCC--SEEEEEEEEEESSSSTTSCEEEEEEEEECCHHHHH----HHHT
T ss_pred CCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCC--CceeeEEEeCCCccCCCceEEEEEEEEEecccccC----CCCC
Confidence 3568999999999 99999999999999999998 77877777655321 2234456667665422111 1234
Q ss_pred ceEEEEEEcHHHHHH
Q psy11834 184 ELIEVVEMGLEEARE 198 (230)
Q Consensus 184 E~~~v~wv~~eE~~~ 198 (230)
|..++.|++++++..
T Consensus 124 e~~~~~W~~~~el~~ 138 (240)
T 3gz5_A 124 SVSDVKWWPLADVLQ 138 (240)
T ss_dssp TCTTEEEEEHHHHTT
T ss_pred cccceEEecHHHccc
Confidence 556799999999863
No 71
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.44 E-value=1.2e-13 Score=117.73 Aligned_cols=87 Identities=20% Similarity=0.113 Sum_probs=61.3
Q ss_pred cEEEe-eeeecCCCCC--H----HHHHHHHHHhhhCCccCCCceEEEEEEEcCC--CccCeEEEEEEEEEcCcccccCCC
Q psy11834 109 VTLEF-CAGIVDKNKS--L----AEIAREEVLEECGYDVPVEKLEKIQTFRSGV--GSAGDRQTLFFVEVTDDMKVNSGG 179 (230)
Q Consensus 109 ~~~el-PgG~VE~GEs--~----~eAA~REl~EETGl~v~~~~l~~l~~~~~~~--~~s~~~~~~y~a~~~~~~~~~~~~ 179 (230)
..|++ |||++|+||+ + .+||+||++||||+.+ ..+..++.+.... ........+|.|.... +.
T Consensus 97 g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v--~~~~~ig~~~~~~~~~~~~~l~~~f~~~~~~------g~ 168 (211)
T 3e57_A 97 NLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSL--RELEFLGLINSSTTEVSRVHLGALFLGRGKF------FS 168 (211)
T ss_dssp --CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEE--EEEEEEEEEECCSSHHHHTEEEEEEEEEEEE------EE
T ss_pred CCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCee--eccEEEEEEeccCCCCCeEEEEEEEEEEeCC------ce
Confidence 35668 9999999999 5 9999999999999988 7777776654321 1122233467777442 12
Q ss_pred CCCCceEEEEEEcHHHHHHHhhcC
Q psy11834 180 GVDEELIEVVEMGLEEAREYLAQD 203 (230)
Q Consensus 180 ~~~~E~~~v~wv~~eE~~~~~~~~ 203 (230)
..+.|..++.|++++++.++..+-
T Consensus 169 ~~~~E~~~~~W~~~~eL~~~~~~l 192 (211)
T 3e57_A 169 VKEKDLFEWELIKLEELEKFSGVM 192 (211)
T ss_dssp ESCTTTCEEEEEEHHHHHHHGGGC
T ss_pred eCCCCeEEEEEEEHHHHHHhHhhc
Confidence 234566789999999999986543
No 72
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.39 E-value=2e-13 Score=116.24 Aligned_cols=89 Identities=25% Similarity=0.247 Sum_probs=59.0
Q ss_pred cEEEeeeeecCCCC-CHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCc-cCeEEEEEEEEEcCccc--c----cCCCC
Q psy11834 109 VTLEFCAGIVDKNK-SLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGS-AGDRQTLFFVEVTDDMK--V----NSGGG 180 (230)
Q Consensus 109 ~~~elPgG~VE~GE-s~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~-s~~~~~~y~a~~~~~~~--~----~~~~~ 180 (230)
..|+||||++|+|| ++.+||+||++||||+.+....+..+..+...++. .....++|++.+..... . .....
T Consensus 75 g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~e~~~~~~~~ 154 (217)
T 2xsq_A 75 GRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTLEELLAVEAGATRAKD 154 (217)
T ss_dssp SCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCHHHHHHHHHHGGGSTT
T ss_pred CeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEeccccceecccccccccc
Confidence 45899999999999 99999999999999999843233322222222222 24455666666542211 0 00122
Q ss_pred CCCceEEEEEEcHHHHH
Q psy11834 181 VDEELIEVVEMGLEEAR 197 (230)
Q Consensus 181 ~~~E~~~v~wv~~eE~~ 197 (230)
++.|.+++.|+|++++.
T Consensus 155 ~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 155 HGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp BTTTEEEEEECCCSBCT
T ss_pred cCCceeeEEEEEHHHhh
Confidence 46789999999998875
No 73
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.25 E-value=1.2e-11 Score=112.85 Aligned_cols=81 Identities=21% Similarity=0.113 Sum_probs=56.7
Q ss_pred CCcEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceE
Q psy11834 107 LGVTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELI 186 (230)
Q Consensus 107 ~~~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~ 186 (230)
.+..|+||||++|+| ++.+|+.||+.||||+.+ .....++.+.+.........++|.+..... ..|..
T Consensus 265 ~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v--~~~~~l~~~~h~~~h~~~~~~~~~~~~~~~---------~~e~~ 332 (369)
T 3fsp_A 265 LANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQV--ELTEPIVSFEHAFSHLVWQLTVFPGRLVHG---------GPVEE 332 (369)
T ss_dssp TTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCE--EECCCCCEEEEECSSEEEEEEEEEEEECCS---------SCCCT
T ss_pred cCCcccCCCcccCCC-CcHHHHHHHHHHHhCCce--eeecccccEEEEcceEEEEEEEEEEEEcCC---------CCCcc
Confidence 457899999999999 999999999999999988 433344443332222334456676665321 23445
Q ss_pred EEEEEcHHHHHHH
Q psy11834 187 EVVEMGLEEAREY 199 (230)
Q Consensus 187 ~v~wv~~eE~~~~ 199 (230)
++.|++++++..+
T Consensus 333 ~~~Wv~~~el~~~ 345 (369)
T 3fsp_A 333 PYRLAPEDELKAY 345 (369)
T ss_dssp TEEEEEGGGGGGS
T ss_pred ccEEeeHHHhhhC
Confidence 6899999998763
No 74
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.19 E-value=1.2e-10 Score=103.28 Aligned_cols=90 Identities=11% Similarity=0.046 Sum_probs=55.4
Q ss_pred cEEEeeeeecCCCCCHHHHHHHHHHhhhCCccCC------------CceE-----EEE-EEEcCCCccC---eEEEEEEE
Q psy11834 109 VTLEFCAGIVDKNKSLAEIAREEVLEECGYDVPV------------EKLE-----KIQ-TFRSGVGSAG---DRQTLFFV 167 (230)
Q Consensus 109 ~~~elPgG~VE~GEs~~eAA~REl~EETGl~v~~------------~~l~-----~l~-~~~~~~~~s~---~~~~~y~a 167 (230)
..|+||||++|+||++.+||+||++||||+.+.. ..+. .+. .+...+..+. ....+|++
T Consensus 150 g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~ 229 (292)
T 1q33_A 150 GEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNY 229 (292)
T ss_dssp CSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEE
T ss_pred CcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEE
Confidence 3588999999999999999999999999998311 1111 111 1222232221 12345555
Q ss_pred EEcCcccccCCC-CCCCceEEEEEEcHHHHHH
Q psy11834 168 EVTDDMKVNSGG-GVDEELIEVVEMGLEEARE 198 (230)
Q Consensus 168 ~~~~~~~~~~~~-~~~~E~~~v~wv~~eE~~~ 198 (230)
.......+.... ..++|+.++.|++++++..
T Consensus 230 ~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~ 261 (292)
T 1q33_A 230 HDETGEIMDNLMLEAGDDAGKVKWVDINDKLK 261 (292)
T ss_dssp EESSSTTTTTCCCCCCTTCSEEEEEECCTTCC
T ss_pred EeCCCccccccccCCCCccceEEEEEcccCcc
Confidence 543222111111 2467888999999999874
No 75
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.70 E-value=8.3e-08 Score=81.10 Aligned_cols=59 Identities=15% Similarity=0.162 Sum_probs=43.9
Q ss_pred EEEeeeeecCCCCCHHHHHHHHHHhhhCC------ccCCCceEEEEEEEcCC-------------CccCeEEEEEEEEEc
Q psy11834 110 TLEFCAGIVDKNKSLAEIAREEVLEECGY------DVPVEKLEKIQTFRSGV-------------GSAGDRQTLFFVEVT 170 (230)
Q Consensus 110 ~~elPgG~VE~GEs~~eAA~REl~EETGl------~v~~~~l~~l~~~~~~~-------------~~s~~~~~~y~a~~~ 170 (230)
.|+||||++++||++++|++|||.||+|. .. ..-..++.++... ....+...+|++...
T Consensus 84 ~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~--eIge~lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp 161 (208)
T 3bho_A 84 FFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDW--VIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ 161 (208)
T ss_dssp EEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----C--EEEEEEEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECC
T ss_pred cEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccE--EEhheEEEEecCCCCCcCCCCCCcccCchhhheeeeeEecC
Confidence 68999999999999999999999999994 33 3345566655431 223566778888754
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.70 E-value=8.3e-09 Score=86.76 Aligned_cols=83 Identities=16% Similarity=0.105 Sum_probs=54.0
Q ss_pred CcEEEeeeeecCCCC-CHHHHHHHHHHhhhCC-ccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccc------cCCC
Q psy11834 108 GVTLEFCAGIVDKNK-SLAEIAREEVLEECGY-DVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKV------NSGG 179 (230)
Q Consensus 108 ~~~~elPgG~VE~GE-s~~eAA~REl~EETGl-~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~------~~~~ 179 (230)
+..|+||||+||+|| |+++|+.||+.||+|+ .+ ....++.+...... .....++|.|.....+.. ....
T Consensus 53 ~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V--~~~~y~~s~~~~yp-~~V~LHfY~crl~~Ge~~~lE~~A~~A~ 129 (214)
T 3kvh_A 53 DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRL--TEADYLSSHLTEGP-HRVVAHLYARQLTLEQLHAVEISAVHSR 129 (214)
T ss_dssp TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CC--CGGGEEEEEEC-----CEEEEEEEEECCHHHHHHHHHHHHTST
T ss_pred CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeee--eeeeeEEEEeccCC-CEEEEEEEEEEeeCCccchhhhcccCCc
Confidence 356999999999999 9999999999999997 46 44444444443322 345778998886543310 0111
Q ss_pred CCCCceEEEEEEcH
Q psy11834 180 GVDEELIEVVEMGL 193 (230)
Q Consensus 180 ~~~~E~~~v~wv~~ 193 (230)
...-|....+.+|+
T Consensus 130 d~G~EvlGlvRVPl 143 (214)
T 3kvh_A 130 DHGLEVLGLVRVPL 143 (214)
T ss_dssp TBTTTEEEEEEECC
T ss_pred ccCceecceEEeee
Confidence 23567888888874
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.68 E-value=7.2e-08 Score=86.63 Aligned_cols=91 Identities=13% Similarity=0.128 Sum_probs=58.3
Q ss_pred EEeeeeecCCCCCHHHHHHHHHHhhh-CCccCCCceEEEEEEEcCCCccCeEEEEEEEEEcCcccccCCCCCCCceEEEE
Q psy11834 111 LEFCAGIVDKNKSLAEIAREEVLEEC-GYDVPVEKLEKIQTFRSGVGSAGDRQTLFFVEVTDDMKVNSGGGVDEELIEVV 189 (230)
Q Consensus 111 ~elPgG~VE~GEs~~eAA~REl~EET-Gl~v~~~~l~~l~~~~~~~~~s~~~~~~y~a~~~~~~~~~~~~~~~~E~~~v~ 189 (230)
|.||||.++.+++ ++|+||++||| |+.+ . +..+...+..+.. .....+|.|...+. . ..++.
T Consensus 204 W~LPG~~~~~~~~--~~a~RE~~EEttGl~v--~-~~~L~~v~~~~~~-~~~~i~f~~~~~~g------~-----~~e~~ 266 (321)
T 3rh7_A 204 LSLPNCTVEGGDP--ARTLAAYLEQLTGLNV--T-IGFLYSVYEDKSD-GRQNIVYHALASDG------A-----PRQGR 266 (321)
T ss_dssp EBCCEEEESSSCH--HHHHHHHHHHHHSSCE--E-EEEEEEEEECTTT-CCEEEEEEEEECSS------C-----CSSSE
T ss_pred ccCCcccCCCChh--HHHHHHHHHHhcCCEE--e-eceEEEEEEcCCC-ceEEEEEEEEeCCC------C-----eeeeE
Confidence 8899987765554 59999999997 9999 3 4445555554443 23334667765321 1 24689
Q ss_pred EEcHHHHHHHhhcCCCCChHHHHHHHHHHHHhhc
Q psy11834 190 EMGLEEAREYLAQDEVRSPSGFLFAMHWFLAAKA 223 (230)
Q Consensus 190 wv~~eE~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 223 (230)
|++++++..+ ++.. +..-..|.+|+..+.
T Consensus 267 ~f~~~elp~~----~~~~-~~~~~~L~~y~~e~~ 295 (321)
T 3rh7_A 267 FLRPAELAAA----KFSS-SATADIINRFVLESS 295 (321)
T ss_dssp EECHHHHTTC----EESS-HHHHHHHHHHHHTTS
T ss_pred EECHHHCCCc----ccCC-HHHHHHHHHHHHHhh
Confidence 9999998864 3444 344555666666543
No 78
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=27.19 E-value=2e+02 Score=21.71 Aligned_cols=45 Identities=16% Similarity=0.158 Sum_probs=31.8
Q ss_pred CccccccCCCCCCcEEEeeeee-c--CCCCCHHHHHHHHHHhhhCCccC
Q psy11834 96 GSIDVTKYPAELGVTLEFCAGI-V--DKNKSLAEIAREEVLEECGYDVP 141 (230)
Q Consensus 96 ~~~~~~~~~~~~~~~~elPgG~-V--E~GEs~~eAA~REl~EETGl~v~ 141 (230)
..||++- |.+++..+..-+|. + ..|+++.+...||+.+.+|-.+.
T Consensus 71 ~QIWLAS-p~SGp~hfd~~~~~Wi~~rdg~~L~~~L~~el~~~~g~~v~ 118 (129)
T 3t3l_A 71 KAIWLSS-PSSGPKRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLD 118 (129)
T ss_dssp TEEEEEC-SSSCCEEEEECSSSEEETTTCCBHHHHHHHHHHHHHTSCCC
T ss_pred hHhheeC-CCCCCeeeEecCCEEEECCCCchHHHHHHHHHHHHhCCcee
Confidence 4555553 32466667676664 2 23899999999999999998773
Done!