BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11842
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus
norvegicus GN=Elovl7 PE=3 SV=1
Length = 281
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
D V+NW LM P IL LY+ FV +GP M+NRKP LK M+ YN F LF+ Y
Sbjct: 22 DPRVENWLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVY 81
Query: 121 IV 122
+
Sbjct: 82 MC 83
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens
GN=ELOVL4 PE=1 SV=1
Length = 314
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
+ D+ V+NW LMQ WP ++I LYL FV +GP +M++R+P ++ +++ YN L N
Sbjct: 32 IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90
Query: 119 AYIVSYIF 126
+I +F
Sbjct: 91 LFIFRELF 98
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca
mulatta GN=ELOVL4 PE=3 SV=1
Length = 314
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
+ D+ V+NW LMQ WP ++I LYL FV +GP +M++R+P ++ +++ YN L N
Sbjct: 32 IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90
Query: 119 AYIVSYIF 126
+I +F
Sbjct: 91 FFIFRELF 98
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca
fascicularis GN=ELOVL4 PE=2 SV=1
Length = 314
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
+ D+ V+NW LMQ WP ++I LYL FV +GP +M++R+P ++ +++ YN L N
Sbjct: 32 IADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90
Query: 119 AYIVSYIF 126
+I +F
Sbjct: 91 FFIFRELF 98
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus
GN=Elovl4 PE=1 SV=2
Length = 312
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 59 LEDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFN 118
+ D+ V +W LMQ WP I+I LYL FV +GP +M++R+P ++ +++ YN L N
Sbjct: 32 IADKRVADWPLMQSPWPTISISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90
Query: 119 AYIVSYIF 126
+I +F
Sbjct: 91 LFIFRELF 98
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens
GN=ELOVL7 PE=1 SV=1
Length = 281
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
D V++W LM P +L Y+ FV +GP M+NRKP LK M+ YN F LF+ Y
Sbjct: 22 DPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVY 81
Query: 121 IV 122
+
Sbjct: 82 MC 83
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus
GN=ELOVL7 PE=2 SV=1
Length = 281
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
D V++W LM P IL Y+ FV +GP M+NRKP LK +M+ YN LF+ Y
Sbjct: 22 DPRVEDWLLMSSPLPQTIILGFYVYFVTSLGPKLMENRKPFELKKVMITYNFSIVLFSVY 81
Query: 121 I 121
+
Sbjct: 82 M 82
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus
GN=Elovl7 PE=2 SV=1
Length = 281
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
D V+++ LM P IL LY+ FV +GP M+NRKP LK M+ YN F LF+ Y
Sbjct: 22 DPRVEDYLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVY 81
Query: 121 IV 122
+
Sbjct: 82 MC 83
>sp|Q32NI8|ELOV5_XENLA Elongation of very long chain fatty acids protein 5 OS=Xenopus
laevis GN=elovl5 PE=2 SV=1
Length = 295
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
+D V W L+ P I LYL F++ GP YMQNR+P+S + I++ YNL TL +
Sbjct: 19 KDPRVKGWLLLDNYVPTIFFTALYL-FIVWRGPKYMQNRQPVSCRSILVVYNLGLTLLSF 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q5M8U1|ELOV5_XENTR Elongation of very long chain fatty acids protein 5 OS=Xenopus
tropicalis GN=elovl5 PE=2 SV=1
Length = 295
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
+D V W L+ P I LYL F++ GP YMQNR P+S + I++ YNL TL +
Sbjct: 19 KDPRVRGWLLLDNYVPTILFTALYL-FIVWRGPKYMQNRPPVSCRGILVVYNLGLTLLSL 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q2KJD9|ELOV5_BOVIN Elongation of very long chain fatty acids protein 5 OS=Bos taurus
GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V+ WFL+ P + +LYL ++ +GP YM+ R+P S + I++ YNL TL +
Sbjct: 19 RDTRVEGWFLLDNYVPTLVCSILYL-LIVWLGPKYMKTRQPFSCRGILVVYNLGLTLLSL 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q920L7|ELOV5_RAT Elongation of very long chain fatty acids protein 5 OS=Rattus
norvegicus GN=Elovl5 PE=2 SV=1
Length = 299
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V WFL+ P +YL ++ +GP YM+NR+P S + I++ YNL TL +
Sbjct: 19 RDTRVKGWFLLDNYIPTFVCSAIYL-LIVWLGPKYMKNRQPFSCRGILVVYNLGLTLLSL 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q4R516|ELOV5_MACFA Elongation of very long chain fatty acids protein 5 OS=Macaca
fascicularis GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V WFL+ P V+YL V +GP YM+N++P S + I++ YNL TL +
Sbjct: 19 RDTRVKGWFLLDNYIPTFICSVIYLLIVW-LGPKYMRNKQPFSCRGILVVYNLGLTLLSL 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q5RFL5|ELOV5_PONAB Elongation of very long chain fatty acids protein 5 OS=Pongo abelii
GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V WFL+ P V+YL V +GP YM+N++P S + I++ YNL TL +
Sbjct: 19 RDTRVKGWFLLDNYIPTFICSVIYLLIVW-LGPKYMRNKQPFSCRGILVVYNLGLTLLSL 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q8BHI7|ELOV5_MOUSE Elongation of very long chain fatty acids protein 5 OS=Mus musculus
GN=Elovl5 PE=1 SV=1
Length = 299
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V WFL+ P V+YL ++ +GP YM+NR+P S + I+ YNL TL +
Sbjct: 19 RDTRVKGWFLLDNYIPTFVCSVIYL-LIVWLGPKYMKNRQPFSCRGILQLYNLGLTLLSL 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q9NYP7|ELOV5_HUMAN Elongation of very long chain fatty acids protein 5 OS=Homo sapiens
GN=ELOVL5 PE=1 SV=1
Length = 299
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V WFL+ P V+YL V +GP YM+N++P S + I++ YNL TL +
Sbjct: 19 RDTRVKGWFLLDNYIPTFICSVIYLLIVW-LGPKYMRNKQPFSCRGILVVYNLGLTLLSL 77
Query: 120 YI 121
Y+
Sbjct: 78 YM 79
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004
OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2
Length = 358
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
D +W LM +P + + + Y+ V +GP M+NRKP L+ ++ YN Q +F+A+
Sbjct: 20 DPRTKDWPLMSSPFPTLALCLGYVYLVKVLGPRLMENRKPFQLRNTLILYNFVQVVFSAW 79
Query: 121 I 121
+
Sbjct: 80 L 80
>sp|Q9NXB9|ELOV2_HUMAN Elongation of very long chain fatty acids protein 2 OS=Homo sapiens
GN=ELOVL2 PE=2 SV=2
Length = 296
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V WF++ P + V+YL + +G YM+NR +SL+ I+ YNL TL +A
Sbjct: 22 RDSRVRGWFMLDSYLPTFFLTVMYL-LSIWLGNKYMKNRPALSLRGILTLYNLGITLLSA 80
Query: 120 YIVS 123
Y+++
Sbjct: 81 YMLA 84
>sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus musculus
GN=Elovl2 PE=2 SV=1
Length = 292
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 60 EDETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNA 119
D V WFL+ P + + YL + +G YM+NR +SL+ I+ YNL TL +A
Sbjct: 22 RDSRVRGWFLLDSYLPTFILTITYLLSIW-LGNKYMKNRPALSLRGILTLYNLAITLLSA 80
Query: 120 YIV 122
Y++
Sbjct: 81 YML 83
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus
GN=Elovl1 PE=2 SV=1
Length = 279
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 61 DETVDNWFLMQYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAY 120
D + ++ LM + +IL+ Y+ F+L +GP M NRKP L+ M+ YN + + Y
Sbjct: 16 DPRIQSYPLMGSPLLITSILLTYVYFILSLGPRIMANRKPFQLRGFMIVYNFSLVILSLY 75
Query: 121 IV 122
IV
Sbjct: 76 IV 77
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens
GN=ELOVL1 PE=1 SV=1
Length = 279
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 78 TILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYNLFQTLFNAYIV 122
+IL+ Y+ FVL +GP M NRKP L+ M+ YN + YIV
Sbjct: 33 SILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFSLVALSLYIV 77
>sp|Q03574|ELO4_CAEEL Putative fatty acid elongation protein 4 OS=Caenorhabditis elegans
GN=elo-4 PE=3 SV=1
Length = 291
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 71 QYQWPVITILVLYLAFVLKIGPAYMQNRKPMSLKYIMLAYN 111
+Y + ITI VLY ++K+ +M+NRKP +LKY ++ +N
Sbjct: 50 KYWYHSITISVLYF-ILIKVIQKFMENRKPFTLKYPLILWN 89
>sp|O88917|LPHN1_RAT Latrophilin-1 OS=Rattus norvegicus GN=Lphn1 PE=1 SV=1
Length = 1515
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 30 LGKVQFILVLIYALSLVAFQCLPRMSSILLEDET-VDNWFLMQYQWPVITILVLY-LAFV 87
+G V F++V+ +V + R SS+L D + +DN W + I +L+ L
Sbjct: 1007 IGPVSFVIVVNLVFLMVTLHKMIRSSSVLKPDSSRLDNI----KSWALGAIALLFLLGLT 1062
Query: 88 LKIGPAYMQNRKPMSLKYIMLAYNLFQTLF 117
G ++ N++ + + Y+ +N FQ +F
Sbjct: 1063 WAFGLLFI-NKESVVMAYLFTTFNAFQGVF 1091
>sp|O97831|LPHN1_BOVIN Latrophilin-1 OS=Bos taurus GN=LPHN1 PE=2 SV=1
Length = 1472
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 30 LGKVQFILVLIYALSLVAFQCLPRMSSILLEDET-VDNWFLMQYQWPVITILVLY-LAFV 87
+G V F++V+ +V + R SS+L D + +DN W + I +L+ L
Sbjct: 1007 IGPVSFVIVVNLVFLMVTLHKMVRSSSVLKPDSSRLDNI----KSWALGAIALLFLLGLT 1062
Query: 88 LKIGPAYMQNRKPMSLKYIMLAYNLFQTLF 117
G ++ N++ + + Y+ +N FQ +F
Sbjct: 1063 WAFGLLFI-NKESVVMAYLFTTFNAFQGVF 1091
>sp|Q80TR1|LPHN1_MOUSE Latrophilin-1 OS=Mus musculus GN=Lphn1 PE=1 SV=2
Length = 1466
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 30 LGKVQFILVLIYALSLVAFQCLPRMSSILLEDET-VDNWFLMQYQWPVITILVLY-LAFV 87
+G V F++V+ +V + R SS+L D + +DN W + I +L+ L
Sbjct: 1002 IGPVSFVIVVNLVFLMVTLHKMIRSSSVLKPDSSRLDNI----KSWALGAIALLFLLGLT 1057
Query: 88 LKIGPAYMQNRKPMSLKYIMLAYNLFQTLF 117
G ++ N++ + + Y+ +N FQ +F
Sbjct: 1058 WAFGLLFI-NKESVVMAYLFTTFNAFQGVF 1086
>sp|O94910|LPHN1_HUMAN Latrophilin-1 OS=Homo sapiens GN=LPHN1 PE=1 SV=1
Length = 1474
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 30 LGKVQFILVLIYALSLVAFQCLPRMSSILLEDET-VDNWFLMQYQWPVITILVLY-LAFV 87
+G V F++V+ +V + R SS+L D + +DN W + I +L+ L
Sbjct: 1008 IGPVSFVIVVNLVFLMVTLHKMIRSSSVLKPDSSRLDNI----KSWALGAIALLFLLGLT 1063
Query: 88 LKIGPAYMQNRKPMSLKYIMLAYNLFQTLF 117
G ++ N++ + + Y+ +N FQ +F
Sbjct: 1064 WAFGLLFI-NKESVVMAYLFTTFNAFQGVF 1092
>sp|O14123|NAH2_SCHPO Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1
Length = 759
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 59 LEDETVDNWFLMQYQWPVITILVL 82
+E+ + NW+ +Q WPV+ LVL
Sbjct: 398 IENPEIPNWYCIQVMWPVVCFLVL 421
>sp|P49190|PTH2R_HUMAN Parathyroid hormone 2 receptor OS=Homo sapiens GN=PTH2R PE=1 SV=1
Length = 550
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 25 REYPKLGKVQFILVLIYALSLVAFQCLP 52
++Y KL K +LVL++ + + F CLP
Sbjct: 356 KQYRKLAKSTLVLVLVFGVHYIVFVCLP 383
>sp|Q6C2Q7|NOP12_YARLI Nucleolar protein 12 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=NOP12 PE=3 SV=1
Length = 509
Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 110 YNLFQTLFNAY--IVSYIFSPGSFSYLKPMSLKYIMLAYNLFQTLFNAYIVSYN 161
YN F+ LF A + S F SFS L P + +I ++ + NAYIV N
Sbjct: 186 YNNFKALFAAIGTVASVRFRSISFSKLLPRKVAFISQQFHSKRDTVNAYIVFKN 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.142 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,837,807
Number of Sequences: 539616
Number of extensions: 1818260
Number of successful extensions: 4970
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4907
Number of HSP's gapped (non-prelim): 67
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 56 (26.2 bits)