BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11843
(325 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YFK|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YFK|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|C Chain C, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|D Chain D, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|E Chain E, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|F Chain F, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|G Chain G, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|H Chain H, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|I Chain I, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|J Chain J, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|K Chain K, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|L Chain L, Crystal Structure Of Human B Type Phosphoglycerate Mutase
Length = 262
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 82/126 (65%), Gaps = 8/126 (6%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+ TSV RA TL +L I Q LPV ++WRLNERHYGGLTGL+KA TAAK+GE Q
Sbjct: 53 DICFTSVQKRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQV 112
Query: 250 RVHRDTIGL------EDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVI 303
++ R + + DH +YSNI D RYA + ++++ P ESLK TI R LP+WN I
Sbjct: 113 KIWRRSYDVPPPPMEPDHPFYSNISKDRRYA-DLTEDQLPSCESLKDTIARALPFWNEEI 171
Query: 304 VPQYSD 309
VPQ +
Sbjct: 172 VPQIKE 177
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLS 31
MA Y +V++RHGES WN +N F GWYDA LS
Sbjct: 1 MAAYKLVLIRHGESAWNLENRFSGWYDADLS 31
>pdb|1E58|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Length = 249
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 79/124 (63%), Gaps = 12/124 (9%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D A+TSVL RA +TL +L + Q LPV KSW+LNERHYG L GL+KA TA KYG+EQ
Sbjct: 52 DFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQV 111
Query: 250 -------RVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNV 302
V + +D Y + DPRYA + S++E P+ ESL LTI+R +PYWN
Sbjct: 112 KQWRRGFAVTPPELTKDDERYPGH---DPRYA-KLSEKELPLTESLALTIDRVIPYWNET 167
Query: 303 IVPQ 306
I+P+
Sbjct: 168 ILPR 171
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKALC 36
+V+VR GES+WN++N F GWYD LSEK +
Sbjct: 5 LVLVRXGESQWNKENRFTGWYDVDLSEKGVS 35
>pdb|1E59|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Complexed With Vanadate
Length = 249
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 79/124 (63%), Gaps = 12/124 (9%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D A+TSVL RA +TL +L + Q LPV KSW+LNERHYG L GL+KA TA KYG+EQ
Sbjct: 52 DFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQV 111
Query: 250 -------RVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNV 302
V + +D Y + DPRYA + S++E P+ ESL LTI+R +PYWN
Sbjct: 112 KQWRRGFAVTPPELTKDDERYPGH---DPRYA-KLSEKELPLTESLALTIDRVIPYWNET 167
Query: 303 IVPQ 306
I+P+
Sbjct: 168 ILPR 171
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKALC 36
+V+VRHGES+WN++N F GWYD LSEK +
Sbjct: 5 LVLVRHGESQWNKENRFTGWYDVDLSEKGVS 35
>pdb|2HHJ|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate (15 Days)
pdb|2HHJ|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate (15 Days)
Length = 267
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+ TSVL R+ +T IL+ +GQE +PV SWRLNERHYG L GL++ A +GEEQ
Sbjct: 53 DLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQV 112
Query: 250 RVHRDTIGL------EDHAYYSNIVDDPRY-ASEPSKEEFPMFESLKLTIERTLPYWNNV 302
R+ R + + E H YY I +D RY + ++ P ESLK +ER LPYWN
Sbjct: 113 RLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNER 172
Query: 303 IVPQ 306
I P+
Sbjct: 173 IAPE 176
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKAL 35
M+KY ++M+R GE WN++N FC W D +L+ + +
Sbjct: 1 MSKYKLIMLRXGEGAWNKENRFCSWVDQKLNSEGM 35
>pdb|1T8P|A Chain A, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|1T8P|B Chain B, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|2A9J|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2A9J|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2F90|A Chain A, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2F90|B Chain B, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2H4X|A Chain A, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4X|B Chain B, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4Z|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H4Z|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H52|A Chain A, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|2H52|B Chain B, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|3NFY|A Chain A, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
pdb|3NFY|B Chain B, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
Length = 267
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+ TSVL R+ +T IL+ +GQE +PV SWRLNERHYG L GL++ A +GEEQ
Sbjct: 53 DLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQV 112
Query: 250 RVHRDTIGL------EDHAYYSNIVDDPRY-ASEPSKEEFPMFESLKLTIERTLPYWNNV 302
R+ R + + E H YY I +D RY + ++ P ESLK +ER LPYWN
Sbjct: 113 RLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNER 172
Query: 303 IVPQ 306
I P+
Sbjct: 173 IAPE 176
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKAL 35
M+KY ++M+RHGE WN++N FC W D +L+ + +
Sbjct: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGM 35
>pdb|4EMB|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|B Chain B, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|C Chain C, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|D Chain D, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
Length = 274
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+A +S+L+RA +TL IL+ +GQ + V K+WRLNERHYG L GL+K+ TAAKYGE++
Sbjct: 77 DIAFSSLLSRANDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEDKV 136
Query: 250 ----RVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVIVP 305
R + D + + + DPRY P K E P E LK T+ R +PYW + I
Sbjct: 137 LIWRRSYDVPPXSLDESDDRHPIKDPRYKHIP-KRELPSTECLKDTVARVIPYWTDEIAK 195
Query: 306 Q 306
+
Sbjct: 196 E 196
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKAL 35
Y +V+VRHGESEWN++NLF GW D +LS+K +
Sbjct: 28 YKLVLVRHGESEWNKENLFTGWTDVKLSDKGI 59
>pdb|3FDZ|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
Length = 257
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+A+TSVL RA TL + + +PV SWRLNERHYG L+GL+KA TAAKYG+EQ
Sbjct: 59 DIAYTSVLKRAIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQV 118
Query: 250 ---RVHRDT--IGLE---DHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNN 301
R DT LE + A Y+ DPRYA P +E+ P+ E LK T+ R LP WN
Sbjct: 119 LVWRRSYDTPPPALEPGDERAPYA----DPRYAKVP-REQLPLTECLKDTVARVLPLWNE 173
Query: 302 VIVP 305
I P
Sbjct: 174 SIAP 177
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
Y +V++R GES WN++N F GW D L+E+
Sbjct: 10 YKLVLIRXGESTWNKENRFTGWVDVDLTEQG 40
>pdb|3LNT|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
pdb|3LNT|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
Length = 250
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+A+TSVL RA TL + + +PV SWRLNERHYG L+GL+KA TAAKYG+EQ
Sbjct: 52 DIAYTSVLKRAIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQV 111
Query: 250 ---RVHRDT--IGLE---DHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNN 301
R DT LE + A Y+ DPRYA P +E+ P+ E LK T+ R LP WN
Sbjct: 112 LVWRRSYDTPPPALEPGDERAPYA----DPRYAKVP-REQLPLTECLKDTVARVLPLWNE 166
Query: 302 VIVP 305
I P
Sbjct: 167 SIAP 170
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
Y +V++RHGES WN++N F GW D L+E+
Sbjct: 3 YKLVLIRHGESTWNKENRFTGWVDVDLTEQG 33
>pdb|3EZN|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3EZN|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3FDZ|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
pdb|3GP3|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|C Chain C, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|D Chain D, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP5|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GP5|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GW8|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
pdb|3GW8|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
Length = 257
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+A+TSVL RA TL + + +PV SWRLNERHYG L+GL+KA TAAKYG+EQ
Sbjct: 59 DIAYTSVLKRAIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQV 118
Query: 250 ---RVHRDT--IGLE---DHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNN 301
R DT LE + A Y+ DPRYA P +E+ P+ E LK T+ R LP WN
Sbjct: 119 LVWRRSYDTPPPALEPGDERAPYA----DPRYAKVP-REQLPLTECLKDTVARVLPLWNE 173
Query: 302 VIVP 305
I P
Sbjct: 174 SIAP 177
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
Y +V++RHGES WN++N F GW D L+E+
Sbjct: 10 YKLVLIRHGESTWNKENRFTGWVDVDLTEQG 40
>pdb|1XQ9|A Chain A, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
pdb|1XQ9|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
Length = 258
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 73/125 (58%), Gaps = 14/125 (11%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
DV +TSVL RA T +LK +PV K+WRLNERHYG L GL+K+ TA KYGEEQ
Sbjct: 61 DVVYTSVLKRAICTAWNVLKTADLLHVPVVKTWRLNERHYGSLQGLNKSETAKKYGEEQV 120
Query: 250 RVHRDTIGL-------EDHAYYS-NIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNN 301
++ R + + ED+ + N+V Y + P K+ P E LK T+ER LP+W +
Sbjct: 121 KIWRRSYDIPPPKLDKEDNRWPGHNVV----YKNVP-KDALPFTECLKDTVERVLPFWFD 175
Query: 302 VIVPQ 306
I P
Sbjct: 176 HIAPD 180
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
M Y +V++RHGES WN++N F GW D LSEK
Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKG 42
>pdb|3D8H|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
pdb|3D8H|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
Length = 267
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
DV +TSVL RA T +LK +G + P+ WRLNERHYG L GL+K+ TA+K+GE+Q
Sbjct: 70 DVVYTSVLKRAIMTTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETASKFGEDQV 129
Query: 250 RVHRDTIGLEDHAYYSNIVDDPRYASE--------PSKEEFPMFESLKLTIERTLPYWNN 301
++ R + + + DPR+ PS P E LK T+ER PY+ +
Sbjct: 130 KIWRRSFDVPPPVLEKS---DPRWPGNELIYKGICPSC--LPTTECLKDTVERVKPYFED 184
Query: 302 VIVP 305
VI P
Sbjct: 185 VIAP 188
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 2 AKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKAL 35
+ Y + ++RHGESEWN++N F GW D LSE+ +
Sbjct: 19 STYKLTLIRHGESEWNKENRFTGWTDVSLSEQGV 52
>pdb|3KKK|A Chain A, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|B Chain B, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|C Chain C, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|D Chain D, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
Length = 258
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 14/125 (11%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
DV +TSVL RA T +LK +PV K+WRLNERH G L GL+K+ TA KYGEEQ
Sbjct: 61 DVVYTSVLKRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEEQV 120
Query: 250 RVHRDTIGL-------EDHAYYS-NIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNN 301
++ R + + ED+ + N+V Y + P K+ P E LK T+ER LP+W +
Sbjct: 121 KIWRRSYDIPPPKLDKEDNRWPGHNVV----YKNVP-KDALPFTECLKDTVERVLPFWFD 175
Query: 302 VIVPQ 306
I P
Sbjct: 176 HIAPD 180
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
M Y +V++RHGES WN++N F GW D LSEK
Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKG 42
>pdb|1RII|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|C Chain C, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|D Chain D, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
Length = 265
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
DV +TS+L RA T L + +PV +SWRLNERHYG L GLDKA T A+YGEEQ
Sbjct: 54 DVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQF 113
Query: 250 ---RVHRDT--IGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVIV 304
R DT +E + +S DPRYA P+ E L + R LPY+ +VIV
Sbjct: 114 MAWRRSYDTPPPPIERGSQFSQDA-DPRYADIGGG---PLTECLADVVARFLPYFTDVIV 169
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
+V++RHGES+WN NLF GW D L++K
Sbjct: 7 LVLLRHGESDWNALNLFTGWVDVGLTDKG 35
>pdb|4EO9|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpm1 From
Mycobacterium Leprae
Length = 268
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
DV +TS+L RA T L +PV +SWRLNERHYG L GLDKA T A+YGEE+
Sbjct: 77 DVLYTSLLRRAITTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERF 136
Query: 250 ---RVHRDT--IGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVIV 304
R DT +E + +S DPRY P+ E L + R LPY+ +VIV
Sbjct: 137 MAWRRSYDTPPPPIEKGSEFSQDA-DPRYTDIGGG---PLTECLADVVTRFLPYFTDVIV 192
Query: 305 PQ 306
P
Sbjct: 193 PD 194
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 5 VIVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
++++RHGES+WN +NLF GW D L++K
Sbjct: 29 TLILLRHGESDWNARNLFTGWVDVGLTDKG 58
>pdb|1QHF|A Chain A, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
pdb|1QHF|B Chain B, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
Length = 240
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
DV +TS L+RA T L+ + +PV++SWRLNERHYG L G DKA T K+GEE+
Sbjct: 50 DVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKF 109
Query: 250 RVHRDTIG-----LEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVI 303
+R + ++ + +S D+ +P+ P ESL L I+R LPYW +VI
Sbjct: 110 NTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNV--LPETESLALVIDRLLPYWQDVI 166
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
+V+VRHG+SEWN+KNLF GW D +LS K
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKG 31
>pdb|4PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|1BQ3|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ4|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|5PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|F Chain F, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|G Chain G, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|H Chain H, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|E Chain E, Saccharomyces Cerevisiae Phosphoglycerate Mutase
Length = 246
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
DV +TS L+RA T L+ + +PV++SWRLNERHYG L G DKA T K+GEE+
Sbjct: 50 DVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKF 109
Query: 250 RVHRDTIG-----LEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVI 303
+R + ++ + +S D+ +P+ P ESL L I+R LPYW +VI
Sbjct: 110 NTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNV--LPETESLALVIDRLLPYWQDVI 166
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
+V+VRHG+SEWN+KNLF GW D +LS K
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKG 31
>pdb|3PGM|A Chain A, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
pdb|3PGM|B Chain B, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
Length = 244
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 192 VAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ-R 250
V +TS L+RA T L+ + +PV++SWRLNERHYG L G DKA T K+GEE+
Sbjct: 51 VDYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKFGEEKFN 110
Query: 251 VHRDTIG-----LEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVI 303
+R + ++ + +S D+ +P+ P ESL L I+R LPYW +VI
Sbjct: 111 TYRRSFDVPPPPIDASSPFSQKGDERYKYVDPN--VLPETESLALVIDRLLPYWQDVI 166
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
+V+VRHG+SEWN+KNLF GW D +LS K
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKG 31
>pdb|1FZT|A Chain A, Solution Structure And Dynamics Of An Open B-Sheet,
Glycolytic Enzyme-Monomeric 23.7 Kda Phosphoglycerate
Mutase From Schizosaccharomyces Pombe
Length = 211
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 23/116 (19%)
Query: 191 DVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQ- 249
D+A TS L RAQ T + IL+ +G+ +L KS +LNER+YG L GL+K K+G EQ
Sbjct: 57 DIAFTSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQV 116
Query: 250 RVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVIVP 305
++ R + Y P P ESLK T ER LPY+ + IVP
Sbjct: 117 QIWRRS-----------------YDIAP-----PNGESLKDTAERVLPYYKSTIVP 150
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 2 AKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKAL 35
A ++V+ RHGESEWN+ NLF GW D LSE +
Sbjct: 6 APNLLVLTRHGESEWNKLNLFTGWKDPALSETGI 39
>pdb|1EBB|A Chain A, Bacillus Stearothermophilus Yhfr
Length = 202
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKA 34
+ + RHGE++WN + GW D+ L+EK
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSPLTEKG 32
>pdb|1H2E|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Phosphate
pdb|1H2F|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Trivanadate
Length = 207
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+ RHGE++WN + GW D+ L+EK
Sbjct: 6 LTRHGETKWNVERRMQGWQDSPLTEKG 32
>pdb|2P2Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
MVRHGE+ WN++ GW D L+ +
Sbjct: 5 MVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P6O|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P6O|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETMWNREGRLLGWTDLPLTAEG 31
>pdb|2EOA|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
pdb|2EOA|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
Length = 177
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P6M|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P6M|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDMPLTAEG 31
>pdb|1V37|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Thermus Thermophilus Hb8
pdb|1V37|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Thermus Thermophilus Hb8
pdb|1V7Q|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Thermus Thermophilus Hb8
pdb|2HIA|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P9Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P9Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2ENW|A Chain A, Mutant Y92h Structure Of Tthb049 From Thermus
Thermophilus Hb8
pdb|2ENW|B Chain B, Mutant Y92h Structure Of Tthb049 From Thermus
Thermophilus Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2OWE|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2OWD|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2OWD|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P9Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P9Y|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P9F|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P9F|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P79|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P79|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P78|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P78|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P77|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P77|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P75|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P75|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P30|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2P2Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P2Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2ENU|A Chain A, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
pdb|2ENU|B Chain B, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2EKZ|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
pdb|2EKZ|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
Length = 177
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEG 31
>pdb|2EKB|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
pdb|2EKB|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
Length = 177
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D L+ +
Sbjct: 5 LVRHGETLWNREGRMLGWTDLPLTAEG 31
>pdb|3DCY|A Chain A, Crystal Structure A Tp53-Induced Glycolysis And
Apoptosis Regulator Protein From Homo Sapiens
Length = 275
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 AKYVIVMVRHGESEWNQKNLFCGW-YDAQLSEKALCMIASVVIY 44
A++ + +VRHGE+ +N++ + G D LSE A+ I+
Sbjct: 7 ARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIF 50
>pdb|2PA0|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2PA0|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 8 MVRHGESEWNQKNLFCGWYDAQLSEKA 34
+VRHGE+ WN++ GW D ++ +
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPMTAEG 31
>pdb|3L2J|A Chain A, Dimeric Structure Of The Ligand-Free Extracellular Domain
Of Parathyroid Hormone Receptor (Pth1r)
pdb|3L2J|B Chain B, Dimeric Structure Of The Ligand-Free Extracellular Domain
Of Parathyroid Hormone Receptor (Pth1r)
Length = 535
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 24 GWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCDIKWAYIL 77
GW A S K AS +YP E +A PT SRY C +W +IL
Sbjct: 410 GWTSASTSGKPRKDKASGKLYPESEEDKEA-----PTGSRYRGRPCLPEWDHIL 458
>pdb|3C4M|A Chain A, Structure Of Human Parathyroid Hormone In Complex With The
Extracellular Domain Of Its G-Protein-Coupled Receptor
(Pth1r)
pdb|3C4M|B Chain B, Structure Of Human Parathyroid Hormone In Complex With The
Extracellular Domain Of Its G-Protein-Coupled Receptor
(Pth1r)
pdb|3H3G|A Chain A, Crystal Structure Of The Extracellular Domain Of The Human
Parathyroid Hormone Receptor (Pth1r) In Complex With
Parathyroid Hormone-Related Protein (Pthrp)
Length = 539
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 24 GWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCDIKWAYIL 77
GW A S K AS +YP E +A PT SRY C +W +IL
Sbjct: 414 GWTSASTSGKPRKDKASGKLYPESEEDKEA-----PTGSRYRGRPCLPEWDHIL 462
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,170,200
Number of Sequences: 62578
Number of extensions: 341623
Number of successful extensions: 613
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 530
Number of HSP's gapped (non-prelim): 68
length of query: 325
length of database: 14,973,337
effective HSP length: 99
effective length of query: 226
effective length of database: 8,778,115
effective search space: 1983853990
effective search space used: 1983853990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)