Query psy11843
Match_columns 325
No_of_seqs 372 out of 2678
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 20:21:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11843.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11843hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14119 gpmA phosphoglyceromu 100.0 1.4E-37 3E-42 279.2 16.8 184 130-325 1-189 (228)
2 PRK14116 gpmA phosphoglyceromu 100.0 1.2E-37 2.5E-42 279.5 15.3 184 130-325 1-189 (228)
3 PRK14117 gpmA phosphoglyceromu 100.0 1.5E-36 3.2E-41 272.7 16.4 182 130-325 1-189 (230)
4 PRK01295 phosphoglyceromutase; 100.0 3.4E-36 7.3E-41 266.1 15.5 162 130-325 2-165 (206)
5 PRK14118 gpmA phosphoglyceromu 100.0 3.9E-36 8.5E-41 269.5 15.2 182 132-325 2-188 (227)
6 COG0588 GpmA Phosphoglycerate 100.0 2.2E-36 4.7E-41 258.9 11.6 182 130-325 1-189 (230)
7 PRK14115 gpmA phosphoglyceromu 100.0 1.7E-35 3.6E-40 268.2 16.4 181 131-325 1-188 (247)
8 PRK01112 phosphoglyceromutase; 100.0 1.3E-35 2.8E-40 266.0 14.5 161 130-325 1-188 (228)
9 TIGR01258 pgm_1 phosphoglycera 100.0 2.5E-35 5.4E-40 266.8 16.2 181 131-325 1-188 (245)
10 PRK13463 phosphatase PhoE; Pro 100.0 1.2E-35 2.5E-40 262.1 13.4 156 131-325 3-158 (203)
11 PRK14120 gpmA phosphoglyceromu 100.0 6.3E-35 1.4E-39 264.5 15.5 182 129-325 3-190 (249)
12 PRK15004 alpha-ribazole phosph 100.0 4.3E-35 9.3E-40 257.7 13.5 156 131-325 1-156 (199)
13 PRK03482 phosphoglycerate muta 100.0 2E-33 4.3E-38 250.0 15.0 157 130-325 1-157 (215)
14 TIGR03848 MSMEG_4193 probable 100.0 2.3E-33 4.9E-38 247.7 14.8 155 132-325 1-159 (204)
15 TIGR03162 ribazole_cobC alpha- 100.0 2.3E-33 5E-38 241.8 13.5 152 133-325 1-152 (177)
16 COG0406 phoE Broad specificity 100.0 3.7E-33 7.9E-38 246.8 14.9 159 130-325 2-160 (208)
17 PRK13462 acid phosphatase; Pro 100.0 2.9E-33 6.2E-38 246.8 14.1 150 129-325 4-154 (203)
18 KOG0235|consensus 100.0 3.1E-33 6.7E-38 244.0 13.1 169 128-325 3-171 (214)
19 smart00855 PGAM Phosphoglycera 100.0 4.3E-32 9.4E-37 229.1 16.2 154 132-325 1-155 (155)
20 PRK07238 bifunctional RNase H/ 100.0 3.8E-31 8.3E-36 253.8 16.1 157 130-325 171-327 (372)
21 PF00300 His_Phos_1: Histidine 100.0 9.1E-32 2E-36 226.2 8.7 157 132-324 1-157 (158)
22 PTZ00123 phosphoglycerate muta 100.0 8.3E-31 1.8E-35 236.3 14.7 166 157-325 4-176 (236)
23 PTZ00322 6-phosphofructo-2-kin 100.0 4.9E-29 1.1E-33 254.9 14.2 157 131-325 420-592 (664)
24 PTZ00122 phosphoglycerate muta 99.9 4E-23 8.7E-28 191.8 11.8 139 130-325 102-247 (299)
25 cd07067 HP_PGM_like Histidine 99.8 1.2E-20 2.7E-25 158.3 10.7 82 132-227 1-83 (153)
26 KOG4026|consensus 99.8 3.3E-20 7.2E-25 157.7 6.1 88 20-110 110-197 (207)
27 PRK14116 gpmA phosphoglyceromu 99.8 2.7E-19 5.9E-24 160.6 7.0 99 3-126 1-103 (228)
28 PRK14119 gpmA phosphoglyceromu 99.8 5.1E-19 1.1E-23 158.8 7.0 100 3-127 1-104 (228)
29 PRK06193 hypothetical protein; 99.8 1.3E-17 2.7E-22 146.3 13.9 123 130-324 42-169 (206)
30 cd07040 HP Histidine phosphata 99.8 5.1E-18 1.1E-22 141.7 10.7 70 132-212 1-70 (153)
31 PRK14117 gpmA phosphoglyceromu 99.7 2.4E-18 5.3E-23 154.6 6.6 100 3-127 1-104 (230)
32 PRK15416 lipopolysaccharide co 99.7 6.8E-17 1.5E-21 140.6 12.7 82 131-230 55-136 (201)
33 PRK14118 gpmA phosphoglyceromu 99.7 7E-18 1.5E-22 151.3 6.5 98 4-126 1-102 (227)
34 PRK13463 phosphatase PhoE; Pro 99.7 6.7E-18 1.5E-22 148.9 5.9 97 3-126 2-99 (203)
35 PRK14120 gpmA phosphoglyceromu 99.7 1E-17 2.2E-22 152.1 7.0 101 1-126 2-106 (249)
36 TIGR00249 sixA phosphohistidin 99.7 2E-16 4.2E-21 133.3 13.3 67 132-213 2-68 (152)
37 KOG3734|consensus 99.7 1.5E-16 3.3E-21 143.1 13.0 170 130-323 12-207 (272)
38 KOG4609|consensus 99.7 3.9E-17 8.4E-22 140.1 6.6 87 122-227 86-172 (284)
39 PRK01112 phosphoglyceromutase; 99.7 2.2E-17 4.9E-22 148.0 5.4 99 3-128 1-129 (228)
40 KOG4754|consensus 99.7 1.5E-16 3.2E-21 136.6 10.1 168 130-323 14-193 (248)
41 COG0406 phoE Broad specificity 99.7 4.8E-17 1.1E-21 143.7 6.4 102 2-128 1-103 (208)
42 PRK10848 phosphohistidine phos 99.7 7.1E-16 1.5E-20 130.8 12.3 67 132-213 2-68 (159)
43 PRK15004 alpha-ribazole phosph 99.7 8.3E-17 1.8E-21 141.5 6.8 95 4-125 1-96 (199)
44 PRK13462 acid phosphatase; Pro 99.7 1E-16 2.2E-21 141.4 6.7 94 2-126 4-101 (203)
45 KOG0234|consensus 99.7 2.4E-16 5.2E-21 149.6 9.5 151 130-325 239-390 (438)
46 PF10242 L_HGMIC_fpl: Lipoma H 99.7 1.3E-16 2.8E-21 138.0 6.0 76 20-98 106-181 (181)
47 PRK01295 phosphoglyceromutase; 99.6 1.8E-16 3.8E-21 140.2 6.0 99 4-127 3-105 (206)
48 PRK03482 phosphoglycerate muta 99.6 1.8E-16 4E-21 140.9 6.1 95 3-124 1-96 (215)
49 PRK14115 gpmA phosphoglyceromu 99.6 1.9E-16 4E-21 143.7 6.0 99 4-127 1-103 (247)
50 TIGR01258 pgm_1 phosphoglycera 99.6 2.9E-16 6.3E-21 142.3 7.0 98 4-126 1-102 (245)
51 TIGR03848 MSMEG_4193 probable 99.6 4.1E-16 8.8E-21 137.6 5.9 95 5-126 1-97 (204)
52 COG2062 SixA Phosphohistidine 99.6 1.3E-15 2.9E-20 128.2 7.5 71 130-213 1-71 (163)
53 KOG0235|consensus 99.6 9.6E-16 2.1E-20 134.2 5.3 99 1-126 3-107 (214)
54 COG0588 GpmA Phosphoglycerate 99.5 7E-15 1.5E-19 126.8 5.1 158 3-185 1-165 (230)
55 PRK07238 bifunctional RNase H/ 99.5 1.2E-14 2.7E-19 139.6 7.2 98 2-125 170-268 (372)
56 TIGR03162 ribazole_cobC alpha- 99.5 1E-14 2.2E-19 125.5 5.5 93 6-126 1-94 (177)
57 PTZ00322 6-phosphofructo-2-kin 99.5 2.5E-14 5.5E-19 146.8 5.3 112 3-127 419-535 (664)
58 smart00855 PGAM Phosphoglycera 99.4 4.2E-13 9.1E-18 112.9 6.5 95 5-124 1-96 (155)
59 PF00300 His_Phos_1: Histidine 99.3 1.2E-12 2.7E-17 109.5 3.0 99 5-128 1-100 (158)
60 PTZ00123 phosphoglycerate muta 99.0 4.5E-10 9.7E-15 101.4 4.6 87 16-127 1-91 (236)
61 cd07067 HP_PGM_like Histidine 98.8 6.6E-09 1.4E-13 86.9 5.9 81 5-110 1-83 (153)
62 PTZ00122 phosphoglycerate muta 98.6 5.2E-08 1.1E-12 90.8 6.8 80 4-110 103-189 (299)
63 PRK06193 hypothetical protein; 98.5 2E-07 4.4E-12 82.0 5.4 63 4-78 43-111 (206)
64 cd07040 HP Histidine phosphata 98.5 2.4E-07 5.2E-12 76.9 5.6 62 5-78 1-63 (153)
65 PRK10848 phosphohistidine phos 98.5 2.9E-07 6.4E-12 78.0 5.9 59 4-78 1-60 (159)
66 TIGR00249 sixA phosphohistidin 98.4 6.1E-07 1.3E-11 75.5 6.8 59 4-78 1-60 (152)
67 PRK15416 lipopolysaccharide co 98.2 9.5E-07 2.1E-11 77.2 3.9 106 3-140 54-161 (201)
68 COG2062 SixA Phosphohistidine 97.9 2E-05 4.2E-10 66.7 5.5 62 3-78 1-63 (163)
69 cd07061 HP_HAP_like Histidine 97.8 2.4E-05 5.2E-10 70.5 5.5 48 166-213 17-74 (242)
70 KOG4754|consensus 96.8 0.002 4.2E-08 56.4 4.7 66 5-80 16-89 (248)
71 KOG0234|consensus 96.8 0.00096 2.1E-08 64.4 3.1 96 5-128 241-336 (438)
72 PF00328 His_Phos_2: Histidine 96.8 0.0053 1.2E-07 57.4 8.1 46 168-213 63-117 (347)
73 PRK10173 glucose-1-phosphatase 96.5 0.019 4.1E-07 56.1 10.4 46 167-212 70-128 (413)
74 KOG3720|consensus 96.5 0.0073 1.6E-07 59.0 7.5 47 167-213 70-128 (411)
75 PRK10172 phosphoanhydride phos 96.4 0.07 1.5E-06 52.3 13.1 47 166-212 71-130 (436)
76 KOG4609|consensus 93.1 0.31 6.7E-06 42.9 6.5 54 6-78 97-151 (284)
77 KOG1057|consensus 90.0 0.43 9.4E-06 49.2 4.7 45 168-212 512-571 (1018)
78 KOG3734|consensus 89.1 0.99 2.2E-05 41.4 6.0 16 3-18 12-27 (272)
79 PF13903 Claudin_2: PMP-22/EMP 77.1 2.9 6.3E-05 34.8 3.6 61 33-93 111-171 (172)
80 PF09370 TIM-br_sig_trns: TIM- 50.9 21 0.00046 32.7 4.0 37 284-324 190-226 (268)
81 COG0529 CysC Adenylylsulfate k 48.3 1.3E+02 0.0027 26.2 8.0 63 166-230 70-136 (197)
82 smart00404 PTPc_motif Protein 46.4 37 0.00079 25.2 4.2 36 284-324 18-53 (105)
83 smart00012 PTPc_DSPc Protein t 46.4 37 0.00079 25.2 4.2 36 284-324 18-53 (105)
84 cd07061 HP_HAP_like Histidine 42.9 34 0.00075 30.3 4.1 55 5-78 5-66 (242)
85 PF07062 Clc-like: Clc-like; 39.4 41 0.00089 29.8 3.9 25 71-95 179-203 (211)
86 smart00195 DSPc Dual specifici 35.1 70 0.0015 25.5 4.4 36 285-324 57-92 (138)
87 PF13422 DUF4110: Domain of un 31.0 73 0.0016 24.5 3.6 23 283-305 13-35 (96)
88 PF14606 Lipase_GDSL_3: GDSL-l 30.6 45 0.00098 28.7 2.7 31 287-319 72-102 (178)
89 PF03742 PetN: PetN ; InterPr 28.0 93 0.002 18.3 2.8 16 70-85 5-20 (29)
90 PF00782 DSPc: Dual specificit 25.8 46 0.001 26.2 1.8 36 285-324 52-87 (133)
91 cd07397 MPP_DevT Myxococcus xa 25.5 1E+02 0.0022 27.8 4.1 34 285-323 126-159 (238)
92 TIGR00824 EIIA-man PTS system, 24.8 1.4E+02 0.0029 23.5 4.3 31 282-317 35-65 (116)
93 TIGR03729 acc_ester putative p 24.0 1.2E+02 0.0025 26.9 4.3 38 283-322 139-176 (239)
94 PF12273 RCR: Chitin synthesis 23.6 90 0.0019 25.1 3.1 19 72-90 1-19 (130)
95 PF01372 Melittin: Melittin; 22.7 1.1E+02 0.0023 17.4 2.3 22 78-99 4-25 (26)
96 KOG1382|consensus 21.3 1.7E+02 0.0037 29.0 5.0 47 168-214 133-184 (467)
No 1
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.4e-37 Score=279.16 Aligned_cols=184 Identities=35% Similarity=0.507 Sum_probs=143.8
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
|++|||||||| |.||.. ...+|+.|.|||+.|++||++++++|++.+.+||.|||||++||+|||++|+
T Consensus 1 m~~l~LvRHGe------T~~N~~-----~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~ 69 (228)
T PRK14119 1 MPKLILCRHGQ------SEWNAK-----NLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYIL 69 (228)
T ss_pred CCEEEEEeCCC------CCcccC-----CCccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHH
Confidence 45799999998 888763 5568899999999999999999999997667899999999999999999998
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCccccc----ccccccCCcccCCCCCCCCCCC
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGLEDHA----YYSNIVDDPRYASEPSKEEFPM 284 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~~~~~----~~~~~~~~~~y~~~~~~~~~p~ 284 (325)
+..+...+|+.++++|+|++||.|||++.+++.+++|+... .|.+.++....+ .......++.|.+ +....+|+
T Consensus 70 ~~~~~~~~~~~~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~p~ 148 (228)
T PRK14119 70 TESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNH-LDKRMMPY 148 (228)
T ss_pred HhcccCCCCeeECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccc-cccccCCC
Confidence 76543236888999999999999999999999999998755 787643210000 0000112233332 22345799
Q ss_pred CCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 285 FESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 285 gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
|||+.++.+|+..+|++++.....++++|||||||++||++
T Consensus 149 GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l 189 (228)
T PRK14119 149 SESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRAL 189 (228)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHH
Confidence 99999999999999999764433467899999999999864
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.2e-37 Score=279.54 Aligned_cols=184 Identities=36% Similarity=0.526 Sum_probs=141.7
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
|++|||||||+ |.||.. ...+|+.|.|||+.|++||+++++.|++.+.+||.|||||+.||+|||++|+
T Consensus 1 m~~l~LVRHGe------T~~N~~-----~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~ 69 (228)
T PRK14116 1 MAKLVLIRHGQ------SEWNLS-----NQFTGWVDVDLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYAL 69 (228)
T ss_pred CCEEEEEeCCC------CCCccc-----cCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHH
Confidence 46799999998 888763 5568899999999999999999999996557899999999999999999998
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCc-cc---ccccccccCCcccCCCCCCCCCCC
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGL-ED---HAYYSNIVDDPRYASEPSKEEFPM 284 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~-~~---~~~~~~~~~~~~y~~~~~~~~~p~ 284 (325)
+..+...+|+.++++|+|++||.|||++++++.+.+|+.+. .|.+++.. +. ...+.....+..|.. +....+|+
T Consensus 70 ~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg 148 (228)
T PRK14116 70 EESDQLWIPETKTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYAN-LDPRIIPG 148 (228)
T ss_pred HhcCcCCCCcccCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhc-cCccCCCC
Confidence 76543336888999999999999999999999999998755 77753220 00 000000001112211 22345799
Q ss_pred CCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 285 FESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 285 gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
|||+.++.+|+..+|++++....+++++|||||||++||++
T Consensus 149 GEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~l 189 (228)
T PRK14116 149 GENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRAL 189 (228)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHH
Confidence 99999999999999999663222467899999999999874
No 3
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.5e-36 Score=272.69 Aligned_cols=182 Identities=36% Similarity=0.552 Sum_probs=141.0
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
|++|||||||+ |.||.. ...+|+.|.|||+.|++||+.+++.|++...+||.|||||++||+|||++++
T Consensus 1 m~~l~LvRHG~------t~~n~~-----~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~ 69 (230)
T PRK14117 1 MVKLVFARHGE------SEWNKA-----NLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLAL 69 (230)
T ss_pred CCEEEEEeCcc------ccCccc-----CCcCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHH
Confidence 46799999998 888863 4568899999999999999999999986567899999999999999999987
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCcc-c-----ccccccccCCcccCCCCCCCCC
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGLE-D-----HAYYSNIVDDPRYASEPSKEEF 282 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~~-~-----~~~~~~~~~~~~y~~~~~~~~~ 282 (325)
+..+...+++.++++|+|++||.|||++.+++.+.+|+.+. .|..++... . +..... .+.+|.. +....+
T Consensus 70 ~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~ 146 (230)
T PRK14117 70 EASDQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAH--TDRRYAS-LDDSVI 146 (230)
T ss_pred HhcccCCCCceeCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCccccccccccc--ccccccc-cccCCC
Confidence 54332337888999999999999999999999999998755 777533210 0 000000 0111211 223467
Q ss_pred CCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 283 PMFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 283 p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
|+|||+.++.+|+..+|++++.+..+++++|||||||++||++
T Consensus 147 p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~l 189 (230)
T PRK14117 147 PDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRAL 189 (230)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHH
Confidence 9999999999999999999653333456889999999999864
No 4
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.4e-36 Score=266.06 Aligned_cols=162 Identities=36% Similarity=0.483 Sum_probs=136.2
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
.++|||||||+ |.||.. ...+|+.|.|||+.|++||+++++.|++.+.+||.|||||+.||+|||++|+
T Consensus 2 ~~~i~LVRHGe------t~~n~~-----~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~ 70 (206)
T PRK01295 2 SRTLVLVRHGQ------SEWNLK-----NLFTGWRDPDLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLIL 70 (206)
T ss_pred CceEEEEeCCC------Cccccc-----CCcCCCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHH
Confidence 36799999998 788763 3457789999999999999999999997667899999999999999999999
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCcccccccccccCCcccCCCCCCCCCCCCCCH
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESL 288 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~ 288 (325)
+.++.+.+++.++++|+|++||+|+|++.+++.+++|+... .|.+. ....+|+|||+
T Consensus 71 ~~~~~~~~~~~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~----------------------~~~~~p~GES~ 128 (206)
T PRK01295 71 EELGQPGLETIRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRS----------------------YDVPPPGGESL 128 (206)
T ss_pred HHcCCCCCCeEECCcccccccccccCCcHHHHHHHchHHHHHHhhcc----------------------cCCCCcCCCCH
Confidence 98865557899999999999999999999999999987655 55531 11357999999
Q ss_pred HHHHHhHHHHH-HHhhccccCCCCEEEEEecCCCccCC
Q psy11843 289 KLTIERTLPYW-NNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 289 ~~~~~Rv~~~l-~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
.+|.+|+..++ +.++ ....++++|||||||++||++
T Consensus 129 ~~~~~Rv~~~~~~~i~-~~~~~~~~vliVtHg~~ir~l 165 (206)
T PRK01295 129 KDTGARVLPYYLQEIL-PRVLRGERVLVAAHGNSLRAL 165 (206)
T ss_pred HHHHHHHHHHHHHHHH-HhccCCCeEEEEcChHHHHHH
Confidence 99999999985 4543 222356899999999999864
No 5
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.9e-36 Score=269.47 Aligned_cols=182 Identities=37% Similarity=0.572 Sum_probs=138.5
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHh
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKG 211 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~ 211 (325)
+|||||||+ |.||.. .+.+|+.|.|||+.|++||+.+++.|++...+||.|||||+.||+|||++|++.
T Consensus 2 ~l~LvRHG~------t~~n~~-----~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~ 70 (227)
T PRK14118 2 ELVFIRHGF------SEWNAK-----NLFTGWRDVNLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEE 70 (227)
T ss_pred EEEEEecCC------Cccccc-----cCcCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHh
Confidence 699999998 888863 456789999999999999999999999655689999999999999999999876
Q ss_pred cCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCc-cc--cccccc-ccCCcccCCCCCCCCCCCCC
Q psy11843 212 IGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGL-ED--HAYYSN-IVDDPRYASEPSKEEFPMFE 286 (325)
Q Consensus 212 ~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~-~~--~~~~~~-~~~~~~y~~~~~~~~~p~gE 286 (325)
.+...+|+.++++|+|++||.|||++.+++.+.+|+... .|...+.. |. ++..+. ...+.+|.. .....+|+||
T Consensus 71 ~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~GE 149 (227)
T PRK14118 71 SNQLWIPQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAH-LPADVVPDAE 149 (227)
T ss_pred cCCCCCCeecCCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhcc-CcCCCCCCCC
Confidence 542236788899999999999999999999999998654 67653221 00 000000 000001110 0123579999
Q ss_pred CHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 287 SLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 287 S~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
|+.++.+|+..+|++++....+++++|||||||++||++
T Consensus 150 s~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~l 188 (227)
T PRK14118 150 NLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRAL 188 (227)
T ss_pred CHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHH
Confidence 999999999999998664323467899999999999864
No 6
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-36 Score=258.94 Aligned_cols=182 Identities=40% Similarity=0.601 Sum_probs=164.9
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
+..++|+|||| |+||.. +.+.||.|.+||++|.+||...|+.|++.++.||.+|||-++||++|+.+++
T Consensus 1 ~~~Lvl~RHGq------SeWN~~-----NlFtGW~Dv~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L 69 (230)
T COG0588 1 MMKLVLLRHGQ------SEWNKE-----NLFTGWVDVDLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVL 69 (230)
T ss_pred CceEEEEecCc------hhhhhc-----CceeeeeecCcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHh
Confidence 35799999998 999974 6789999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCc------ccccccccccCCcccCCCCCCCCC
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGL------EDHAYYSNIVDDPRYASEPSKEEF 282 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~------~~~~~~~~~~~~~~y~~~~~~~~~ 282 (325)
+.++...+|+..+++|+|++||.++|++.++..++|++++. .|+++|+- ..+++++. .|++|.. ......
T Consensus 70 ~e~d~~~ipv~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~--~d~ry~~-~~~~~~ 146 (230)
T COG0588 70 EESDQLWIPVIKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPH--RDRRYAH-LDIGGL 146 (230)
T ss_pred hhhcccCcchhhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccc--ccccccc-ccccCC
Confidence 99977779999999999999999999999999999999988 99999982 23445554 6888876 556667
Q ss_pred CCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 283 PMFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 283 p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
|.+||+.++..|+..+|++.|.+...+|++||||+||+++||+
T Consensus 147 p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaL 189 (230)
T COG0588 147 PLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRAL 189 (230)
T ss_pred CccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHH
Confidence 8899999999999999999999988999999999999999974
No 7
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.7e-35 Score=268.25 Aligned_cols=181 Identities=45% Similarity=0.672 Sum_probs=142.0
Q ss_pred cceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHH
Q psy11843 131 HPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILK 210 (325)
Q Consensus 131 ~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 210 (325)
++|||||||+ |.||.. ...+|+.|.|||+.|++||+.+++.|++.+.+||.|||||++||+|||++|++
T Consensus 1 ~~i~LVRHGq------t~~n~~-----~~~~G~~D~pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~ 69 (247)
T PRK14115 1 TKLVLIRHGE------SQWNKE-----NRFTGWTDVDLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLD 69 (247)
T ss_pred CEEEEEECCC------cccccc-----cCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHH
Confidence 4699999998 888763 34578899999999999999999999876678999999999999999999998
Q ss_pred hcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCcc------cccccccccCCcccCCCCCCCCCC
Q psy11843 211 GIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGLE------DHAYYSNIVDDPRYASEPSKEEFP 283 (325)
Q Consensus 211 ~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~~------~~~~~~~~~~~~~y~~~~~~~~~p 283 (325)
.++...+|+.++++|+|++||.|||++++++.+++|+... .|.+.+... .++.++. .++.|.. .....+|
T Consensus 70 ~~~~~~~~~~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~p 146 (247)
T PRK14115 70 ELDQMWLPVEKSWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPG--HDPRYAK-LPEEELP 146 (247)
T ss_pred HcCCCCCCceECccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCccccccccccc--ccchhhc-ccCCCCC
Confidence 8763335888999999999999999999999999998645 777643310 0111110 1222321 1123579
Q ss_pred CCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 284 MFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 284 ~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+|||+.++.+|+..+|++++.....++++|||||||++||++
T Consensus 147 ~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l 188 (247)
T PRK14115 147 LTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRAL 188 (247)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHH
Confidence 999999999999999998664333567899999999999864
No 8
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.3e-35 Score=265.99 Aligned_cols=161 Identities=32% Similarity=0.422 Sum_probs=134.5
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
|++|||||||+ |.||.. ...+|+.|.|||+.|++||..++++|+ ..+||+|||||+.||+|||++|+
T Consensus 1 M~~L~LvRHGq------t~~n~~-----~~~~G~~D~~Lte~G~~Qa~~l~~~L~--~~~~d~iysSpl~Ra~qTA~~i~ 67 (228)
T PRK01112 1 MALLILLRHGQ------SVWNAK-----NLFTGWVDIPLSQQGIAEAIAAGEKIK--DLPIDCIFTSTLVRSLMTALLAM 67 (228)
T ss_pred CcEEEEEeCCC------Cccccc-----cccCCCCCCCcCHHHHHHHHHHHHHhh--cCCCCEEEEcCcHHHHHHHHHHH
Confidence 46899999998 888763 455788999999999999999999999 47899999999999999999998
Q ss_pred HhcC--------------------------CCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCccccc
Q psy11843 210 KGIG--------------------------QEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGLEDHA 262 (325)
Q Consensus 210 ~~~~--------------------------~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~~~~~ 262 (325)
+.++ ...+|+..+++|+|++||.|||++++++.+.+|+... .|.+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~------- 140 (228)
T PRK01112 68 TNHSSGKIPYIVHEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRS------- 140 (228)
T ss_pred HhhcccccccccccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCc-------
Confidence 5321 1126788899999999999999999999999988765 56541
Q ss_pred ccccccCCcccCCCCCCCCCCCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 263 YYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 263 ~~~~~~~~~~y~~~~~~~~~p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
....+|+|||+.++.+|+..+|++++......+++|||||||++||++
T Consensus 141 ---------------~~~~~p~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir~l 188 (228)
T PRK01112 141 ---------------YKTAPPQGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLRSL 188 (228)
T ss_pred ---------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHH
Confidence 123579999999999999999998654333456899999999999864
No 9
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=2.5e-35 Score=266.79 Aligned_cols=181 Identities=41% Similarity=0.596 Sum_probs=141.2
Q ss_pred cceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHH
Q psy11843 131 HPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILK 210 (325)
Q Consensus 131 ~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 210 (325)
++|||||||+ |.||.. +..+|+.|.|||+.|++||+.++++|+..+++||.|||||++||+|||++|++
T Consensus 1 ~~l~lVRHGq------t~~n~~-----~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~ 69 (245)
T TIGR01258 1 MKLVLVRHGE------SEWNAL-----NLFTGWVDVKLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALD 69 (245)
T ss_pred CEEEEEeCCC------cCcccc-----CCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHH
Confidence 3699999998 888763 45578899999999999999999999876678999999999999999999998
Q ss_pred hcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCccc------ccccccccCCcccCCCCCCCCCC
Q psy11843 211 GIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGLED------HAYYSNIVDDPRYASEPSKEEFP 283 (325)
Q Consensus 211 ~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~~~------~~~~~~~~~~~~y~~~~~~~~~p 283 (325)
.++...+|+.++++|+|++||.|||++.+++.+.||+.+. .|...+..+. ++.++. .++.|.. .....+|
T Consensus 70 ~~~~~~~~i~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~--~d~~y~~-~~~~~~p 146 (245)
T TIGR01258 70 ELDQLWIPVKKSWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPH--NDPRYAH-LDPKVLP 146 (245)
T ss_pred hcCCCCCCeeeCcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccc--cChhhhc-CCcccCC
Confidence 7763335778899999999999999999999999998655 6765433110 000000 1222321 1122478
Q ss_pred CCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 284 MFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 284 ~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+|||+.++.+|+..+|++++.....++++|||||||++||++
T Consensus 147 ~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l 188 (245)
T TIGR01258 147 LTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRAL 188 (245)
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHH
Confidence 999999999999999999764433467899999999999864
No 10
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=1.2e-35 Score=262.14 Aligned_cols=156 Identities=13% Similarity=0.141 Sum_probs=134.1
Q ss_pred cceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHH
Q psy11843 131 HPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILK 210 (325)
Q Consensus 131 ~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 210 (325)
++|||||||+ |.||.. ...+|+.|.|||+.|++||+.+++.|+ ..++|.|||||+.||+|||+++++
T Consensus 3 ~~i~lvRHG~------t~~n~~-----~~~~G~~d~~Lt~~G~~Qa~~~~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~ 69 (203)
T PRK13463 3 TTVYVTRHGE------TEWNVA-----KRMQGRKNSALTENGILQAKQLGERMK--DLSIHAIYSSPSERTLHTAELIKG 69 (203)
T ss_pred eEEEEEeCCC------Cccchh-----CcccCCCCCCcCHHHHHHHHHHHHHhc--CCCCCEEEECCcHHHHHHHHHHHh
Confidence 6799999998 777763 455788999999999999999999998 568999999999999999999988
Q ss_pred hcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHHH
Q psy11843 211 GIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKL 290 (325)
Q Consensus 211 ~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~~ 290 (325)
.++ +|+.++++|+|++||.|||++.+++.+.||+.+..|.. + +....+|+|||+.+
T Consensus 70 ~~~---~~~~~~~~l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~---------------~------~~~~~~~~gEs~~~ 125 (203)
T PRK13463 70 ERD---IPIIADEHFYEINMGIWEGQTIDDIERQYPDDIQLFWN---------------E------PHLFQSTSGENFEA 125 (203)
T ss_pred cCC---CCceECcCceeCCCCccCCCcHHHHhhhCHHHHHHHHh---------------C------hhccCCCCCeEHHH
Confidence 766 89999999999999999999999999999987654433 1 12235789999999
Q ss_pred HHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 291 TIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 291 ~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+.+|+..+|++++ ....+++|||||||++||++
T Consensus 126 ~~~R~~~~l~~i~--~~~~~~~vlvVsHg~~ir~~ 158 (203)
T PRK13463 126 VHKRVIEGMQLLL--EKHKGESILIVSHAAAAKLL 158 (203)
T ss_pred HHHHHHHHHHHHH--HhCCCCEEEEEeChHHHHHH
Confidence 9999999999865 33566889999999999864
No 11
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.3e-35 Score=264.52 Aligned_cols=182 Identities=36% Similarity=0.492 Sum_probs=140.0
Q ss_pred CccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHH
Q psy11843 129 NLHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAI 208 (325)
Q Consensus 129 ~~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i 208 (325)
.+++|||||||+ |.||.. ...+|+.|.|||+.|++||+.+++.|++.+..|+.|||||+.||+|||++|
T Consensus 3 ~m~~i~LVRHGq------t~~n~~-----~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i 71 (249)
T PRK14120 3 MTYTLVLLRHGE------SEWNAK-----NLFTGWVDVDLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLA 71 (249)
T ss_pred CCcEEEEEeCCC------Cccccc-----CCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHH
Confidence 457899999998 777763 455788999999999999999999999755679999999999999999999
Q ss_pred HHhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHH-HhhhccCccc-----ccccccccCCcccCCCCCCCCC
Q psy11843 209 LKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQR-VHRDTIGLED-----HAYYSNIVDDPRYASEPSKEEF 282 (325)
Q Consensus 209 ~~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~-~w~~~~~~~~-----~~~~~~~~~~~~y~~~~~~~~~ 282 (325)
++..+...+|+.++++|+|++||.|||++.+++.++||+... .|.+.+..+. +..|.. ..|+.|.. ...+
T Consensus 72 ~~~~~~~~~~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~-~~d~~~~~---~~~~ 147 (249)
T PRK14120 72 LDAADRLWIPVRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQ-DNDPRYAD---LGVG 147 (249)
T ss_pred HHhcccCCCCeEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCcccccccccc-ccCccccc---cCCC
Confidence 875543347888999999999999999999999999998533 7765332110 000000 01122211 1235
Q ss_pred CCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 283 PMFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 283 p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
|+|||+.++.+|+..+|++++....+++++|||||||++||++
T Consensus 148 p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l 190 (249)
T PRK14120 148 PRTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRAL 190 (249)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHH
Confidence 8999999999999999998543334567889999999999874
No 12
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=4.3e-35 Score=257.72 Aligned_cols=156 Identities=17% Similarity=0.142 Sum_probs=133.1
Q ss_pred cceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHH
Q psy11843 131 HPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILK 210 (325)
Q Consensus 131 ~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 210 (325)
++|||||||+ |.||.. ...+|+.|.|||+.|++||+.+++.|+ +.+||.|||||+.||+|||+++++
T Consensus 1 ~~i~lvRHG~------t~~n~~-----~~~~G~~d~pLt~~G~~Qa~~~~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~ 67 (199)
T PRK15004 1 MRLWLVRHGE------TQANVD-----GLYSGHAPTPLTARGIEQAQNLHTLLR--DVPFDLVLCSELERAQHTARLVLS 67 (199)
T ss_pred CeEEEEeCCC------CccccC-----CcEeCCCCCCcCHHHHHHHHHHHHHHh--CCCCCEEEECchHHHHHHHHHHHh
Confidence 3599999998 777763 445778999999999999999999998 578999999999999999999998
Q ss_pred hcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHHH
Q psy11843 211 GIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKL 290 (325)
Q Consensus 211 ~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~~ 290 (325)
.++ +++.++++|+|++||.|||++..++.+.+|+.+..|.... ....+|+|||+.+
T Consensus 68 ~~~---~~~~~~~~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~gEs~~~ 123 (199)
T PRK15004 68 DRQ---LPVHIIPELNEMFFGDWEMRHHRDLMQEDAENYAAWCNDW---------------------QHAIPTNGEGFQA 123 (199)
T ss_pred cCC---CCceeChhheeCCCcccCCCCHHHHHHHCHHHHHHHHhCh---------------------hhcCCCCCcCHHH
Confidence 776 8899999999999999999999999988887665665411 1124689999999
Q ss_pred HHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 291 TIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 291 ~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+.+|+..+++++. ...++++|||||||++||++
T Consensus 124 ~~~Rv~~~l~~l~--~~~~~~~iliVsHg~~i~~l 156 (199)
T PRK15004 124 FSQRVERFIARLS--AFQHYQNLLIVSHQGVLSLL 156 (199)
T ss_pred HHHHHHHHHHHHH--HhCCCCeEEEEcChHHHHHH
Confidence 9999999999965 33456789999999999863
No 13
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=2e-33 Score=250.00 Aligned_cols=157 Identities=14% Similarity=0.104 Sum_probs=128.8
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
|++|||||||+ |+||.. ...+|..|.|||+.|++||+.+++.|+ ..+++.|||||+.||+|||++|+
T Consensus 1 m~~i~lvRHG~------t~~n~~-----~~~~g~~d~~Lt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~i~ 67 (215)
T PRK03482 1 MLQVYLVRHGE------TQWNAE-----RRIQGQSDSPLTAKGEQQAMQVAERAK--ELGITHIISSDLGRTRRTAEIIA 67 (215)
T ss_pred CcEEEEEeCCC------cccccc-----cccCCCCCCCcCHHHHHHHHHHHHHHh--cCCCCEEEECCcHHHHHHHHHHH
Confidence 46899999998 777763 344678899999999999999999998 46899999999999999999999
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHH
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLK 289 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~ 289 (325)
+.++ +|+.++++|+|++||.|+|++.+++...++ .|...+. .. +....+|+|||+.
T Consensus 68 ~~~~---~~~~~~~~L~E~~~G~~eg~~~~~~~~~~~----~~~~~~~-----------~~------~~~~~~p~gEs~~ 123 (215)
T PRK03482 68 QACG---CDIIFDPRLRELNMGVLEKRHIDSLTEEEE----GWRRQLV-----------NG------TVDGRIPEGESMQ 123 (215)
T ss_pred HhcC---CCeeEChhccccCCccccCCcHHHHHhhHH----HHHHhhh-----------cC------CCccCCCCCccHH
Confidence 8887 789999999999999999999998865432 3443110 00 1123478999999
Q ss_pred HHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 290 LTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 290 ~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
++.+|+..+|++++ ..+++++|||||||++|+++
T Consensus 124 ~~~~Rv~~~l~~~~--~~~~~~~vliVsHg~~i~~l 157 (215)
T PRK03482 124 ELSDRMHAALESCL--ELPQGSRPLLVSHGIALGCL 157 (215)
T ss_pred HHHHHHHHHHHHHH--HhCCCCeEEEEeCcHHHHHH
Confidence 99999999999965 33456789999999999864
No 14
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=2.3e-33 Score=247.66 Aligned_cols=155 Identities=24% Similarity=0.232 Sum_probs=126.4
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCC-CCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHH
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARP-EYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILK 210 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~-d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 210 (325)
+|||||||| |.||.. ...+|+. |.|||+.|++||++++++|+ +.+||.|||||+.||+|||++|++
T Consensus 1 ~i~lvRHG~------t~~n~~-----~~~~g~~~d~~Lt~~G~~qa~~l~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~ 67 (204)
T TIGR03848 1 TVILVRHGR------STANTA-----GTLAGRTPGVDLDERGREQAAALAERLA--DLPIAAIVSSPLERCRETAEPIAE 67 (204)
T ss_pred CEEEEeCCC------CCcccc-----ccccCCCCCCCcCHHHHHHHHHHHHHHh--cCCCCEEEeCcHHHHHHHHHHHHH
Confidence 489999998 788763 3456677 59999999999999999998 578999999999999999999998
Q ss_pred hcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHHH
Q psy11843 211 GIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKL 290 (325)
Q Consensus 211 ~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~~ 290 (325)
.++ +|+.++++|+|++||.|+|++.+++.+. +.+..|.. + +....+|+|||+.+
T Consensus 68 ~~~---~~~~~~~~L~E~~~G~~eG~~~~e~~~~--~~~~~~~~---------------~------~~~~~~p~gEs~~~ 121 (204)
T TIGR03848 68 ARG---LPPRVDERLGECDYGDWTGRELKELAKE--PLWPVVQA---------------H------PSAAVFPGGESLAQ 121 (204)
T ss_pred hcC---CCceECcccccCCCCeeCCcCHHHHhCc--HHHHHHhc---------------C------cccCCCCCCCCHHH
Confidence 887 7899999999999999999999998753 11113332 0 12235789999999
Q ss_pred HHHhHHHHHHHhhcc---ccCCCCEEEEEecCCCccCC
Q psy11843 291 TIERTLPYWNNVIVP---QYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 291 ~~~Rv~~~l~~ii~~---~~~~~~~vLvVsHg~~ir~~ 325 (325)
+.+|+..++++++.. ..+.+++|||||||++||++
T Consensus 122 ~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir~l 159 (204)
T TIGR03848 122 VQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIKSV 159 (204)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHHHH
Confidence 999999999986522 11356789999999999864
No 15
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=2.3e-33 Score=241.81 Aligned_cols=152 Identities=18% Similarity=0.228 Sum_probs=128.4
Q ss_pred eEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHhc
Q psy11843 133 VMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGI 212 (325)
Q Consensus 133 i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~ 212 (325)
|||||||| |.||.. ... |+.|.|||+.|++||+.+++.|+ +.+++.|||||+.||+|||+++++.+
T Consensus 1 i~lvRHg~------t~~n~~-----~~~-g~~d~~Lt~~G~~qa~~l~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~~~ 66 (177)
T TIGR03162 1 LYLIRHGE------TDVNAG-----LCY-GQTDVPLAEKGAEQAAALREKLA--DVPFDAVYSSPLSRCRELAEILAERR 66 (177)
T ss_pred CEEEeCCC------CccCCC-----cee-CCCCCCcChhHHHHHHHHHHHhc--CCCCCEEEECchHHHHHHHHHHHhhc
Confidence 69999998 777763 233 67899999999999999999998 57899999999999999999999888
Q ss_pred CCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHHHHH
Q psy11843 213 GQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTI 292 (325)
Q Consensus 213 ~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~~~~ 292 (325)
+ +++.++++|+|+++|.|+|++.+++.+.+| ....|..+ +....+|+|||+.++.
T Consensus 67 ~---~~~~~~~~L~E~~~G~~~g~~~~~~~~~~~-~~~~~~~~---------------------~~~~~~~~gEs~~~~~ 121 (177)
T TIGR03162 67 G---LPIIKDPRLREMDFGDWEGRSWDEIPEAYP-ELDAWAAD---------------------WQHARPPGGESFADFY 121 (177)
T ss_pred C---CCceECCccccccCCccCCCCHHHHHHhCH-HHHHHHhC---------------------cccCCCcCCCCHHHHH
Confidence 7 789999999999999999999999998887 33345431 1123478999999999
Q ss_pred HhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 293 ERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 293 ~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+|+..+++++. ...++++|||||||++++++
T Consensus 122 ~R~~~~~~~l~--~~~~~~~vlvVsHg~~i~~l 152 (177)
T TIGR03162 122 QRVSEFLEELL--KAHEGDNVLIVTHGGVIRAL 152 (177)
T ss_pred HHHHHHHHHHH--HhCCCCeEEEEECHHHHHHH
Confidence 99999999965 23456899999999999863
No 16
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=3.7e-33 Score=246.83 Aligned_cols=159 Identities=23% Similarity=0.243 Sum_probs=136.7
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
+++|||||||| |.||.. ...+|+.|+|||+.|++||+.+++.|+.....|+.|||||+.||+|||++++
T Consensus 2 ~~~i~lvRHGq------t~~n~~-----~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a 70 (208)
T COG0406 2 MMRLYLVRHGE------TEWNVE-----GRLQGWTDSPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLA 70 (208)
T ss_pred ceEEEEEecCC------cccccc-----ccccCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHH
Confidence 57899999998 888753 4556788999999999999999999997667999999999999999999999
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHH
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLK 289 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~ 289 (325)
+.++ +++.+++.|+|+++|.|||++.+++.+.+|.....|... +....+|+|||+.
T Consensus 71 ~~~~---~~~~~~~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~---------------------~~~~~~~~gEs~~ 126 (208)
T COG0406 71 EELG---LPLEVDDRLREIDFGDWEGLTIDELAEEPPEELAAWLAD---------------------PYLAPPPGGESLA 126 (208)
T ss_pred HhcC---CCceecCCeeEeecccccCCcHHHHHHhCHHHHHHHhcC---------------------ccccCCCCCCCHH
Confidence 9998 678899999999999999999999999998877666541 1223467799999
Q ss_pred HHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 290 LTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 290 ~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
++.+|+..+++++. ..+.+++|||||||++||++
T Consensus 127 ~~~~R~~~~~~~~~--~~~~~~~vlvVsHg~~ir~l 160 (208)
T COG0406 127 DVSKRVVAALAELL--RSPPGNNVLVVSHGGVIRAL 160 (208)
T ss_pred HHHHHHHHHHHHHH--HhcCCCeEEEEEChHHHHHH
Confidence 99999999999966 33444489999999999853
No 17
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=2.9e-33 Score=246.79 Aligned_cols=150 Identities=23% Similarity=0.185 Sum_probs=123.0
Q ss_pred CccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHH
Q psy11843 129 NLHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAI 208 (325)
Q Consensus 129 ~~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i 208 (325)
.+++|||||||+ |+||.. .+.+|+.|.|||+.|++||+.+++.|++..+.++.|||||+.||+|||+++
T Consensus 4 ~~~~i~LvRHG~------t~~n~~-----~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i 72 (203)
T PRK13462 4 RNHRLLLLRHGE------TEWSKS-----GRHTGRTELELTETGRTQAELAGQALGELELDDPLVISSPRRRALDTAKLA 72 (203)
T ss_pred cccEEEEEeCCC------CCcccC-----CCccCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCEEEECchHHHHHHHHHh
Confidence 467899999998 888763 456788999999999999999999998543333389999999999999987
Q ss_pred HHhcCCCCCC-ccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCC
Q psy11843 209 LKGIGQEDLP-VHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFES 287 (325)
Q Consensus 209 ~~~~~~~~~~-i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES 287 (325)
+ .+ +.++++|+|++||.|+|++..++.+.+|+. ..|.. .+|+|||
T Consensus 73 ----~---~~~~~~~~~LrE~~~G~~eG~~~~ei~~~~~~~-~~~~~--------------------------~~p~gES 118 (203)
T PRK13462 73 ----G---LTVDEVSGLLAEWDYGSYEGLTTPQIRESEPDW-LVWTH--------------------------GCPGGES 118 (203)
T ss_pred ----c---CcccccCccccccCCccccCCcHHHHHHhCchH-HhhcC--------------------------CCCCCcc
Confidence 2 23 367899999999999999999999888752 12321 2479999
Q ss_pred HHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 288 LKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 288 ~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+.++.+|+..++++++ ..+++++|||||||++||++
T Consensus 119 ~~~~~~Rv~~~l~~i~--~~~~~~~vliVsHg~vir~l 154 (203)
T PRK13462 119 VAQVNERADRAVALAL--EHMESRDVVFVSHGHFSRAV 154 (203)
T ss_pred HHHHHHHHHHHHHHHH--HhCCCCCEEEEeCCHHHHHH
Confidence 9999999999999965 33456789999999999863
No 18
>KOG0235|consensus
Probab=100.00 E-value=3.1e-33 Score=244.02 Aligned_cols=169 Identities=36% Similarity=0.530 Sum_probs=148.0
Q ss_pred CCccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHH
Q psy11843 128 LNLHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKA 207 (325)
Q Consensus 128 ~~~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~ 207 (325)
++..+++|||||| |+||.. +.++|+.|.+||+.|++||.++++.|++.++.||.+||||++||+|||++
T Consensus 3 ~~~~~lvlvRHGe------s~wN~e-----~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~ 71 (214)
T KOG0235|consen 3 SNTFRLVLVRHGE------SEWNKE-----NIFQGWIDAPLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAEL 71 (214)
T ss_pred CcceEEEEEecCc------hhhhhh-----CcccccccCccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHH
Confidence 4567899999998 999985 57789999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCC
Q psy11843 208 ILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFES 287 (325)
Q Consensus 208 i~~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES 287 (325)
|++..+...+|+..+++|+|++||+++|+...|+.+.+|++.. . .+++|.+ .....+|.|||
T Consensus 72 il~~~~~~~~pv~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~---~--------------~~~r~~~-~~~~~~p~~Es 133 (214)
T KOG0235|consen 72 ILEELKQKKVPVLYTWRLNERHYGDLQGLNKRETAKRYGEEQV---Y--------------EDPRLSD-LDEIPLPDGES 133 (214)
T ss_pred HHHhhccCCcceEechhhchhhhccccCccHHHHHHHcchhcc---c--------------cchhhcc-CCcCCCCCCcc
Confidence 9999987779999999999999999999999999999997632 0 1122221 12345789999
Q ss_pred HHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 288 LKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 288 ~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+.++.+|+..+|++.+.++...|++||||+||+++|+|
T Consensus 134 L~~~~~R~~~~~~e~i~~~~~~gk~Vli~aHGnsLR~i 171 (214)
T KOG0235|consen 134 LKDCLDRLLPFWNEEIAKESKEGKNVLIVAHGNSLRAI 171 (214)
T ss_pred HHHHHHHHHHHHHHhhhhhhcCCcEEEEEcCcHHHHHH
Confidence 99999999999999898888889999999999999875
No 19
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=100.00 E-value=4.3e-32 Score=229.05 Aligned_cols=154 Identities=26% Similarity=0.250 Sum_probs=125.7
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHc-CCCcCEEEecCcHHHHHHHHHHHH
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKA-GFKFDVAHTSVLTRAQNTLKAILK 210 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~-~~~~~~i~sSpl~Ra~qTA~~i~~ 210 (325)
+|||||||+ |.+|.. ....|..|.|||+.|++||+.+++.|+.. ..+|+.|||||+.||+|||+++++
T Consensus 1 ~i~lvRHG~------s~~n~~-----~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~ 69 (155)
T smart00855 1 RLYLIRHGE------TEANRE-----GRLTGWTDSPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAI 69 (155)
T ss_pred CEEEEeCCC------Cccccc-----CeEcCCCCCCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHH
Confidence 589999998 677653 12234589999999999999999999864 468999999999999999999998
Q ss_pred hcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHHH
Q psy11843 211 GIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKL 290 (325)
Q Consensus 211 ~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~~ 290 (325)
.++ .++ +++.|+|+++|.|+|++.+++.+.+++....| ....+|+|||+.+
T Consensus 70 ~~~---~~~-~~~~L~E~~~G~~~g~~~~~~~~~~~~~~~~~-------------------------~~~~~~~gEs~~~ 120 (155)
T smart00855 70 ALG---LGE-VDPRLRERDYGAWEGLTKEEERAKAWTRPADW-------------------------LGAAPPGGESLAD 120 (155)
T ss_pred hcC---CCC-CChhhhhcccceecCCcHHHHHHHHHHHHhcc-------------------------CCCCCcCCCCHHH
Confidence 887 454 78999999999999999999887766532211 1235789999999
Q ss_pred HHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 291 TIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 291 ~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+..|+.++++++.......+++|||||||++||++
T Consensus 121 ~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 121 VVERLVRALEELIATHDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred HHHHHHHHHHHHHHhcccCCCeEEEEECCcccccC
Confidence 99999999999653222356789999999999975
No 20
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.97 E-value=3.8e-31 Score=253.79 Aligned_cols=157 Identities=25% Similarity=0.213 Sum_probs=134.3
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
+++|||||||+ |.||.. ...+|..|.|||+.|++||+.+++.|+... +||.|||||+.||+|||++++
T Consensus 171 ~~~i~LvRHGe------t~~n~~-----~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~~-~~d~i~sSpl~Ra~qTA~~i~ 238 (372)
T PRK07238 171 PTRLLLLRHGQ------TELSVQ-----RRYSGRGNPELTEVGRRQAAAAARYLAARG-GIDAVVSSPLQRARDTAAAAA 238 (372)
T ss_pred ceEEEEEeCCC------CCcccC-----CeeeCCCCCCcCHHHHHHHHHHHHHHhccC-CCCEEEECChHHHHHHHHHHH
Confidence 57899999998 777753 344678899999999999999999998432 899999999999999999999
Q ss_pred HhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHH
Q psy11843 210 KGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLK 289 (325)
Q Consensus 210 ~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~ 289 (325)
+.++ +++.++++|+|++||.|+|++.+++.+.+|+.+..|.. ++ ...+|+|||+.
T Consensus 239 ~~~~---~~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~---------------~~-------~~~~p~gEs~~ 293 (372)
T PRK07238 239 KALG---LDVTVDDDLIETDFGAWEGLTFAEAAERDPELHRAWLA---------------DT-------SVAPPGGESFD 293 (372)
T ss_pred HhcC---CCcEECccceeCCCCccCCCCHHHHHHHCHHHHHHHHh---------------CC-------CCCCcCCCCHH
Confidence 9887 78999999999999999999999999999887666764 11 12468999999
Q ss_pred HHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 290 LTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 290 ~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
++.+|+..++++++ ..+++++|||||||++||++
T Consensus 294 ~~~~Rv~~~l~~l~--~~~~~~~vlvVtHg~~ir~l 327 (372)
T PRK07238 294 AVARRVRRARDRLI--AEYPGATVLVVSHVTPIKTL 327 (372)
T ss_pred HHHHHHHHHHHHHH--HHCCCCeEEEEEChHHHHHH
Confidence 99999999999965 33566889999999999864
No 21
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.97 E-value=9.1e-32 Score=226.18 Aligned_cols=157 Identities=20% Similarity=0.202 Sum_probs=131.1
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHh
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKG 211 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~ 211 (325)
+|||||||+ +.+|.. ....++.|.|||+.|++||+.++..|++...+++.|||||+.||+|||+++++.
T Consensus 1 ~i~liRHg~------~~~n~~-----~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~ 69 (158)
T PF00300_consen 1 RIYLIRHGE------SEFNAE-----GRVQGDSDPPLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEG 69 (158)
T ss_dssp EEEEEE-S-------BHHHHT-----TBCGTTSSTGBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEEECCc------cccccC-----CCcCCCCCccccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhcc
Confidence 589999998 666643 334567777999999999999999999777899999999999999999999998
Q ss_pred cCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCHHHH
Q psy11843 212 IGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLT 291 (325)
Q Consensus 212 ~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~~~~ 291 (325)
++ .++.+++.|+|+++|.|+|++.+++.+.++.....|.... ....+|+|||+.++
T Consensus 70 ~~---~~~~~~~~l~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~Es~~~~ 125 (158)
T PF00300_consen 70 LG---IEIIVDPRLREIDFGDWEGRPFDEIEEKFPDEFEAWWSDP---------------------YFYRPPGGESWEDF 125 (158)
T ss_dssp HT---SEEEEEGGGSCCGCGGGTTSBHHHHHHHHHHHHHHHHHHT---------------------SSCGSTTSHHHHHH
T ss_pred cc---cccccccccccccchhhcccchhhHHhhhhcccchhhccc---------------------cccccccCCCHHHH
Confidence 88 7899999999999999999999999999986655565411 12346899999999
Q ss_pred HHhHHHHHHHhhccccCCCCEEEEEecCCCccC
Q psy11843 292 IERTLPYWNNVIVPQYSDETCYLATVTWNKNKK 324 (325)
Q Consensus 292 ~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~ 324 (325)
..|+..+++.++. ...++++|||||||++||+
T Consensus 126 ~~R~~~~~~~l~~-~~~~~~~vliVsHg~~i~~ 157 (158)
T PF00300_consen 126 QQRVKQFLDELIA-YKRPGENVLIVSHGGFIRA 157 (158)
T ss_dssp HHHHHHHHHHHHH-HHHTTSEEEEEE-HHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCCEEEEEecHHHHHh
Confidence 9999999999652 2457889999999999986
No 22
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.97 E-value=8.3e-31 Score=236.27 Aligned_cols=166 Identities=41% Similarity=0.628 Sum_probs=130.3
Q ss_pred CCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHhcCCCCCCccccccchhhccCCCCCC
Q psy11843 157 KSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGL 236 (325)
Q Consensus 157 ~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~i~~~~~L~E~~~G~~eG~ 236 (325)
+++.+|+.|.|||+.|++||+++++.|+..+.+||.|||||+.||+|||++|++.++.+.+|+.++++|+|++||.|||+
T Consensus 4 ~~~~qG~~D~pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~~EG~ 83 (236)
T PTZ00123 4 ENRFTGWTDVPLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGALQGL 83 (236)
T ss_pred cCceeCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhcccccccCC
Confidence 34568899999999999999999999987678899999999999999999999887644468888999999999999999
Q ss_pred cHHHHHHhhchhHH-HhhhccCcc------cccccccccCCcccCCCCCCCCCCCCCCHHHHHHhHHHHHHHhhccccCC
Q psy11843 237 DKAATAAKYGEEQR-VHRDTIGLE------DHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVIVPQYSD 309 (325)
Q Consensus 237 ~~~e~~~~~~~~~~-~w~~~~~~~------~~~~~~~~~~~~~y~~~~~~~~~p~gES~~~~~~Rv~~~l~~ii~~~~~~ 309 (325)
+.+++.+.+|+... .|...+..+ .+..|+. .+..|.. .....+|+|||+.++.+|+..+|++++.....+
T Consensus 84 ~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~ 160 (236)
T PTZ00123 84 NKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPG--NDPVYKD-IPKDALPNTECLKDTVERVLPYWEDHIAPDILA 160 (236)
T ss_pred CHHHHHHHccHHHHHHHhcccCCCCCCcccccccccc--cchhhhc-cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999998755 666543311 0111111 1111211 123467999999999999999999866444456
Q ss_pred CCEEEEEecCCCccCC
Q psy11843 310 ETCYLATVTWNKNKKV 325 (325)
Q Consensus 310 ~~~vLvVsHg~~ir~~ 325 (325)
+++|||||||++||++
T Consensus 161 ~~~vliVsHG~vir~l 176 (236)
T PTZ00123 161 GKKVLVAAHGNSLRAL 176 (236)
T ss_pred CCeEEEEeCHHHHHHH
Confidence 7899999999999864
No 23
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.96 E-value=4.9e-29 Score=254.90 Aligned_cols=157 Identities=12% Similarity=-0.001 Sum_probs=128.1
Q ss_pred cceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHc-CCCcCEEEecCcHHHHHHHHHHH
Q psy11843 131 HPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKA-GFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 131 ~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~-~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
++|||||||| |.||.. ++.+| |+|||+.|++||++++++|++. ..+++.|||||++||+|||+++.
T Consensus 420 m~i~LiRHGe------T~~n~~-----~r~~G--d~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~ 486 (664)
T PTZ00322 420 MNLYLTRAGE------YVDLLS-----GRIGG--NSRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFA 486 (664)
T ss_pred ceEEEEeccc------chhhhc-----CccCC--CCccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHH
Confidence 5799999998 889874 34455 7899999999999999999864 34578999999999999999997
Q ss_pred Hhc--------------CCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCC
Q psy11843 210 KGI--------------GQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYAS 275 (325)
Q Consensus 210 ~~~--------------~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~ 275 (325)
+.. +...+|+..+++|+|++||.|||++.+++.+.||+.+..|.. |
T Consensus 487 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~---------------d----- 546 (664)
T PTZ00322 487 EESILQQSTASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKA---------------D----- 546 (664)
T ss_pred hccccccccccccccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHh---------------C-----
Confidence 531 011267889999999999999999999999999988766664 1
Q ss_pred CCCCCCCCCCCCHHHHH-HhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 276 EPSKEEFPMFESLKLTI-ERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 276 ~~~~~~~p~gES~~~~~-~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
+....+|+|||+.++. .|+..+++++. ...++|||||||++||++
T Consensus 547 -~~~~~~P~GES~~d~~~~R~~~~i~~l~----~~~~~ilvVsHg~vir~l 592 (664)
T PTZ00322 547 -PYYTAWPNGECIHQVFNARLEPHIHDIQ----ASTTPVLVVSHLHLLQGL 592 (664)
T ss_pred -CCcCCCCCCcCHHHHHHHHHHHHHHHHH----ccCCCEEEEeCcHHHHHH
Confidence 1123579999999976 79999999953 223679999999999864
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.89 E-value=4e-23 Score=191.84 Aligned_cols=139 Identities=14% Similarity=0.055 Sum_probs=98.4
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcC------CCcCEEEecCcHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAG------FKFDVAHTSVLTRAQN 203 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~------~~~~~i~sSpl~Ra~q 203 (325)
.++|||||||| +.++.. ....+.+||+.|++||+.++++|++.. .+||+||||||.||+|
T Consensus 102 ~~~L~LVRHGq------~~~~~~--------~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~q 167 (299)
T PTZ00122 102 QRQIILVRHGQ------YINESS--------NDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKE 167 (299)
T ss_pred eeEEEEEECCC------CCCCCC--------CCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHH
Confidence 38999999997 222110 112234599999999999999999631 2899999999999999
Q ss_pred HHHHHHHhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCC
Q psy11843 204 TLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFP 283 (325)
Q Consensus 204 TA~~i~~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p 283 (325)
||++|++.++ .+|+.++++|+| |++..+. + . +....++
T Consensus 168 TAeiIa~~~~--~~~v~~d~~LrE-------G~~~~~~----~-------------------------~----~~~~~~~ 205 (299)
T PTZ00122 168 TAEIISEAFP--GVRLIEDPNLAE-------GVPCAPD----P-------------------------P----SRGFKPT 205 (299)
T ss_pred HHHHHHHhCC--CCCceeCccccc-------CCccccC----c-------------------------c----ccccCCC
Confidence 9999998763 278999999999 2221110 0 0 0012245
Q ss_pred CCCCHHHHHHhHHHHHHHhhccccC-CCCEEEEEecCCCccCC
Q psy11843 284 MFESLKLTIERTLPYWNNVIVPQYS-DETCYLATVTWNKNKKV 325 (325)
Q Consensus 284 ~gES~~~~~~Rv~~~l~~ii~~~~~-~~~~vLvVsHg~~ir~~ 325 (325)
++|+ .++.+|+..++++++..... .++++||||||++||++
T Consensus 206 gee~-~~~~~Rv~~al~~i~~r~~~~~~~~vLVVsHGgvIR~l 247 (299)
T PTZ00122 206 IEEI-LEDMKRIEAAFEKYFHRPVEDEDSVEIIVCHGNVIRYL 247 (299)
T ss_pred cchH-HHHHHHHHHHHHHHHHhcccCCCCeEEEEeCChHHHHH
Confidence 5555 67799999999996532211 24578999999999864
No 25
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.84 E-value=1.2e-20 Score=158.33 Aligned_cols=82 Identities=33% Similarity=0.433 Sum_probs=67.0
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHh
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKG 211 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~ 211 (325)
+|||||||+ +.+|.. ....++.|.|||+.|++||+.+++.|+..+.+++.|||||+.||+|||+++++.
T Consensus 1 ~i~liRHg~------~~~~~~-----~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~ 69 (153)
T cd07067 1 RLYLVRHGE------SEWNAE-----GRFQGWTDVPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEE 69 (153)
T ss_pred CEEEEECCC------Cccccc-----CcccCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHh
Confidence 489999998 555542 223468899999999999999999999766689999999999999999999987
Q ss_pred c-CCCCCCccccccchh
Q psy11843 212 I-GQEDLPVHKSWRLNE 227 (325)
Q Consensus 212 ~-~~~~~~i~~~~~L~E 227 (325)
+ + +++..++.|+|
T Consensus 70 ~~~---~~~~~~~~L~e 83 (153)
T cd07067 70 LPG---LPVEVDPRLRE 83 (153)
T ss_pred cCC---CCceeCccchH
Confidence 7 3 56666655555
No 26
>KOG4026|consensus
Probab=99.80 E-value=3.3e-20 Score=157.72 Aligned_cols=88 Identities=45% Similarity=0.976 Sum_probs=81.4
Q ss_pred CcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy11843 20 NLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCDIKWAYILAIIGCLDVIVLAILAFILATRH 99 (325)
Q Consensus 20 ~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~~~~a~~~a~~~~~~~~~~~~l~~i~~~r~ 99 (325)
.+++||+.. .+|+++..|+.+||.||+++++|++||+.+++|++|+|+++|||++||+|++|+++||+++|.+++|+
T Consensus 110 ~~~cg~~q~---~a~l~milGc~lyP~GW~s~~vr~~CG~~a~ky~lG~CsIgWaY~lAIig~~daliL~~lsf~l~~k~ 186 (207)
T KOG4026|consen 110 FNMCGWMQG---IAGLCMILGCALYPDGWDSPEVRRMCGAKAGKYYLGDCSIGWAYYLAIIGILDALILAFLSFVLGTKQ 186 (207)
T ss_pred hhhhHHHHH---HHHHHHHHHHHhcCCccCCHHHHHHhccccCCccCccccccHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 357888864 57889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccc
Q psy11843 100 IKLQPEPLYGE 110 (325)
Q Consensus 100 ~~~~~~~~~~E 110 (325)
.+..+++...|
T Consensus 187 ~~~~p~~~~~~ 197 (207)
T KOG4026|consen 187 QRLLPEESKAE 197 (207)
T ss_pred CCcccchhhhc
Confidence 99999886544
No 27
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=99.78 E-value=2.7e-19 Score=160.57 Aligned_cols=99 Identities=22% Similarity=0.283 Sum_probs=81.4
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
|++|||||||+|+||..++++||.|+|||+.|+.||..+. ..+++. ..+|+..+|| +.||..||
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~--------~~L~~~----~~~~d~i~sSpL~Ra~qTA--- 65 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAG--------RLIKEA----GLEFDQAYTSVLTRAIKTL--- 65 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCCCcCHHHHHHHHHHH--------HHHHhc----CCCCCEEEECChHHHHHHH---
Confidence 5789999999999999999999999999999999998885 555541 1346666788 99999999
Q ss_pred HHHHHHHHHHHHHHhhc---cCCCCCCccccccccCCCCCCCccCCCC
Q psy11843 82 CLDVIVLAILAFILATR---HIKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 82 ~~~~~~~~~l~~i~~~r---~~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..++... ..++..++.++|+|||.|||++..+..+
T Consensus 66 ----------~~i~~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~ 103 (228)
T PRK14116 66 ----------HYALEESDQLWIPETKTWRLNERHYGALQGLNKKETAE 103 (228)
T ss_pred ----------HHHHHhcCcCCCCcccCcccccccchhhcCCCHHHHHH
Confidence 6555432 3567778899999999999999887654
No 28
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=99.77 E-value=5.1e-19 Score=158.83 Aligned_cols=100 Identities=26% Similarity=0.349 Sum_probs=81.1
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
|++|||||||||+||.+++++||+|+|||+.|+.||..+. +.+++. ...++..+|| +.||..||
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~--------~~L~~~----~~~~d~i~sSpL~Ra~~TA--- 65 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAG--------EKVREN----NIAIDVAFTSLLTRALDTT--- 65 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCCCCcCHHHHHHHHHHH--------HHHHhc----CCCCCEEEeCccHHHHHHH---
Confidence 5789999999999999999999999999999999999886 455531 1345566788 99999999
Q ss_pred HHHHHHHHHHHHHHhhc---cCCCCCCccccccccCCCCCCCccCCCCC
Q psy11843 82 CLDVIVLAILAFILATR---HIKLQPEPLYGEINNAYGDNNSVAGSRKS 127 (325)
Q Consensus 82 ~~~~~~~~~l~~i~~~r---~~~~~~~~~~~E~~~g~~~~~s~~~~r~~ 127 (325)
..+.... ..++..++.++|+|||.|||++..+....
T Consensus 66 ----------~~i~~~~~~~~~~~~~~~~LrE~~fG~weG~~~~ei~~~ 104 (228)
T PRK14119 66 ----------HYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKE 104 (228)
T ss_pred ----------HHHHHhcccCCCCeeECCCccccccccccCCcHHHHHHH
Confidence 5554432 35677788999999999999988876543
No 29
>PRK06193 hypothetical protein; Provisional
Probab=99.76 E-value=1.3e-17 Score=146.35 Aligned_cols=123 Identities=15% Similarity=0.017 Sum_probs=89.8
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCC-----CCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYAR-----PEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNT 204 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~-----~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qT 204 (325)
...|||||||+ +++|.. ....++ .|.|||++|++||..+++.|++.+++||.|||||+.||+||
T Consensus 42 ~~~L~LvRHGe------t~~n~~-----~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qT 110 (206)
T PRK06193 42 GGYVIYFRHAA------TDRSQA-----DQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWET 110 (206)
T ss_pred CCEEEEEeCcc------CCCCcc-----CCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHH
Confidence 46799999998 555432 111223 36899999999999999999987889999999999999999
Q ss_pred HHHHHHhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCC
Q psy11843 205 LKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPM 284 (325)
Q Consensus 205 A~~i~~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~ 284 (325)
|++++.... .++ ++++ .. ...|.
T Consensus 111 A~il~~~~~---~~~----~l~~-------------------------~~-------------------------~~~~~ 133 (206)
T PRK06193 111 AQLAFGRHE---KEI----RLNF-------------------------LN-------------------------SEPVP 133 (206)
T ss_pred HHHHhcccc---cCc----cccc-------------------------cc-------------------------ccCCC
Confidence 998764322 110 0000 00 01234
Q ss_pred CCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccC
Q psy11843 285 FESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKK 324 (325)
Q Consensus 285 gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~ 324 (325)
+|+.+.+.+|+..+++.+ ..++++||||+|+..|+.
T Consensus 134 ~~~~~~y~~~l~~~I~~l----~~~~~~vLlVgHnp~i~~ 169 (206)
T PRK06193 134 AERNALLKAGLRPLLTTP----PDPGTNTVLVGHDDNLEA 169 (206)
T ss_pred hhhHHHHHHHHHHHHhhC----CCCCCeEEEEeCchHHHH
Confidence 688888899999999873 256778999999988764
No 30
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.75 E-value=5.1e-18 Score=141.71 Aligned_cols=70 Identities=27% Similarity=0.287 Sum_probs=59.1
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHh
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKG 211 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~ 211 (325)
.|+|||||+ +.++.. ....++.|.|||+.|++||..+++.|++...+++.|||||+.||+|||++++..
T Consensus 1 ~i~liRHg~------~~~~~~-----~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~ 69 (153)
T cd07040 1 VLYLVRHGE------REPNAE-----GRFTGWGDGPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEG 69 (153)
T ss_pred CEEEEeCCC------CccccC-----CCccCCCCCCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHH
Confidence 489999998 444432 223568999999999999999999999755589999999999999999999887
Q ss_pred c
Q psy11843 212 I 212 (325)
Q Consensus 212 ~ 212 (325)
+
T Consensus 70 ~ 70 (153)
T cd07040 70 L 70 (153)
T ss_pred h
Confidence 6
No 31
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=99.74 E-value=2.4e-18 Score=154.59 Aligned_cols=100 Identities=26% Similarity=0.344 Sum_probs=80.1
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
|++|||||||+|+||.++++|||.|+|||++|+.||..+. +.+++. ..+++..+|| +.||..||
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~--------~~l~~~----~~~~~~i~sSpl~Ra~~TA--- 65 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAG--------KLIKEA----GIEFDLAFTSVLKRAIKTT--- 65 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCCCCcCHHHHHHHHHHH--------HHHHHc----CCCCCEEEECCcHHHHHHH---
Confidence 5789999999999999999999999999999999998885 445431 1334555677 99999999
Q ss_pred HHHHHHHHHHHHHHh---hccCCCCCCccccccccCCCCCCCccCCCCC
Q psy11843 82 CLDVIVLAILAFILA---TRHIKLQPEPLYGEINNAYGDNNSVAGSRKS 127 (325)
Q Consensus 82 ~~~~~~~~~l~~i~~---~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~~ 127 (325)
.+++. ..+.++..++.++|+|||.|||++..+....
T Consensus 66 ----------~~i~~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~ 104 (230)
T PRK14117 66 ----------NLALEASDQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQ 104 (230)
T ss_pred ----------HHHHHhcccCCCCceeCCccccccchhhcCCCHHHHHHH
Confidence 44432 2346777788999999999999998886543
No 32
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.72 E-value=6.8e-17 Score=140.60 Aligned_cols=82 Identities=13% Similarity=0.041 Sum_probs=60.3
Q ss_pred cceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHH
Q psy11843 131 HPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILK 210 (325)
Q Consensus 131 ~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~ 210 (325)
.+||||||||.+ .|+.. ....+. .|||++|++||+.++++|++.. ..|.|||||+.||+|||+++++
T Consensus 55 ~~L~LiRHGet~-----~~~~~------~~~sD~-RpLTerG~~qA~~lg~~L~~~~-~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 55 PVVVLFRHAERC-----DRSDN------QCLSDK-TGITVKGTQDARELGKAFSADI-PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CEEEEEeCcccc-----CccCC------CCCCCC-CCCCHHHHHHHHHHHHHHhCCC-CCCEEEECCCHHHHHHHHHHhc
Confidence 569999999821 33211 111123 7899999999999999998533 3489999999999999999976
Q ss_pred hcCCCCCCccccccchhhcc
Q psy11843 211 GIGQEDLPVHKSWRLNERHY 230 (325)
Q Consensus 211 ~~~~~~~~i~~~~~L~E~~~ 230 (325)
+ .++.++++|.|.+.
T Consensus 122 --~---~~v~~~~~Lye~~~ 136 (201)
T PRK15416 122 --G---KKLTVDKRLSDCGN 136 (201)
T ss_pred --C---CCcEecHHHhhcCc
Confidence 2 45666766666554
No 33
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=99.72 E-value=7e-18 Score=151.32 Aligned_cols=98 Identities=23% Similarity=0.338 Sum_probs=79.3
Q ss_pred eEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGC 82 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~ 82 (325)
|+|||||||+|+||.+++++|++|+|||+.|+.||..+. ..+++.. ..++..+|| +.||..||
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~--------~~l~~~~----~~~d~i~sSpl~Ra~~TA---- 64 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKAAG--------KKLKEAG----YEFDIAFTSVLTRAIKTC---- 64 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCCCCCCHHHHHHHHHHH--------HHHHhcC----CCCCEEEEeChHHHHHHH----
Confidence 479999999999999999999999999999999998886 4555421 345556777 99999999
Q ss_pred HHHHHHHHHHHHHhhc---cCCCCCCccccccccCCCCCCCccCCCC
Q psy11843 83 LDVIVLAILAFILATR---HIKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 83 ~~~~~~~~l~~i~~~r---~~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..+.... ..+++.++.++|||||.|||++..+..+
T Consensus 65 ---------~~i~~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~ 102 (227)
T PRK14118 65 ---------NIVLEESNQLWIPQVKNWRLNERHYGALQGLDKKATAE 102 (227)
T ss_pred ---------HHHHHhcCCCCCCeecCCccccccCccccCCcHHHHHH
Confidence 6655433 2566777889999999999998877643
No 34
>PRK13463 phosphatase PhoE; Provisional
Probab=99.71 E-value=6.7e-18 Score=148.92 Aligned_cols=97 Identities=19% Similarity=0.290 Sum_probs=81.1
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
|++|||||||+|+||.+++++|+.|+|||+.|+.||..+. +.+++ .+++..+|| +.||..||
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~--------~~l~~------~~~~~i~sSpl~Ra~qTA--- 64 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGRKNSALTENGILQAKQLG--------ERMKD------LSIHAIYSSPSERTLHTA--- 64 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCCCCCCcCHHHHHHHHHHH--------HHhcC------CCCCEEEECCcHHHHHHH---
Confidence 5889999999999999999999999999999999998886 44443 234555677 99999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCC
Q psy11843 82 CLDVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 82 ~~~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..+....+.++..++.++|+|||.|||.+..+..+
T Consensus 65 ----------~~i~~~~~~~~~~~~~l~E~~~G~~eG~~~~e~~~ 99 (203)
T PRK13463 65 ----------ELIKGERDIPIIADEHFYEINMGIWEGQTIDDIER 99 (203)
T ss_pred ----------HHHHhcCCCCceECcCceeCCCCccCCCcHHHHhh
Confidence 55555567788888999999999999998777643
No 35
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.71 E-value=1e-17 Score=152.08 Aligned_cols=101 Identities=28% Similarity=0.363 Sum_probs=81.5
Q ss_pred CCceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHH
Q psy11843 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAI 79 (325)
Q Consensus 1 ~~~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~ 79 (325)
|+|++|||||||+|+||..++++|+.|+|||+.|+.||..+. ..+++. ...++..+|| +.||..||
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a--------~~l~~~----~~~~~~IysSpl~Ra~qTA- 68 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFTGWVDVDLTEKGEAEAKRGG--------ELLAEA----GVLPDVVYTSLLRRAIRTA- 68 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHH--------HHHHhc----CCCCCEEEecChHHHHHHH-
Confidence 788899999999999999999999999999999999998875 445431 1234556788 99999999
Q ss_pred HHHHHHHHHHHHHHHHhh---ccCCCCCCccccccccCCCCCCCccCCCC
Q psy11843 80 IGCLDVIVLAILAFILAT---RHIKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 80 ~~~~~~~~~~~l~~i~~~---r~~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..++.. ..+++..++.++|+|||.|||++..+.++
T Consensus 69 ------------~~i~~~~~~~~~~i~~~~~L~E~~fG~~eG~~~~ei~~ 106 (249)
T PRK14120 69 ------------NLALDAADRLWIPVRRSWRLNERHYGALQGKDKAETKA 106 (249)
T ss_pred ------------HHHHHhcccCCCCeEECCCcccccccccCCCCHHHHHH
Confidence 444332 23567677899999999999999888654
No 36
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.70 E-value=2e-16 Score=133.30 Aligned_cols=67 Identities=16% Similarity=0.247 Sum_probs=59.2
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHh
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKG 211 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~ 211 (325)
+|||||||+ ++|+.. ++.|.|||++|++||+.++++|++.+..||.|||||+.||+|||+++++.
T Consensus 2 ~l~LvRHg~------a~~~~~---------~d~dr~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~ 66 (152)
T TIGR00249 2 QLFIMRHGD------AALDAA---------SDSVRPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDC 66 (152)
T ss_pred EEEEEeCCC------cccccC---------CCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHH
Confidence 699999998 555431 47789999999999999999999877789999999999999999999988
Q ss_pred cC
Q psy11843 212 IG 213 (325)
Q Consensus 212 ~~ 213 (325)
++
T Consensus 67 ~~ 68 (152)
T TIGR00249 67 LN 68 (152)
T ss_pred cC
Confidence 76
No 37
>KOG3734|consensus
Probab=99.70 E-value=1.5e-16 Score=143.14 Aligned_cols=170 Identities=18% Similarity=0.147 Sum_probs=117.3
Q ss_pred ccceEEecCCCcccccccc-cccccc-----------CC------CCCC--CCCCCCCCChhhHHHHHHHHHHHHHcCCC
Q psy11843 130 LHPVMLMPQGVHEQDRFSE-FSNRTA-----------NS------KSSR--YARPEYPSSLNSVNEAEAAGVALAKAGFK 189 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~-~n~~~~-----------~~------~~~~--~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~ 189 (325)
.+.|++|||||..++.+.. |-..-. |. +.++ .-..|+|||+.|.-|++..|+.|...+..
T Consensus 12 ~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~~ 91 (272)
T KOG3734|consen 12 PRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGIA 91 (272)
T ss_pred CceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCCC
Confidence 4789999999966645544 422110 00 0011 12468899999999999999999999999
Q ss_pred cCEEEecCcHHHHHHHHHHHHhcC-CCCCCccccccchhhccCC----CCCC-cHHHHHHhhchhHHHhhhccCcccccc
Q psy11843 190 FDVAHTSVLTRAQNTLKAILKGIG-QEDLPVHKSWRLNERHYGG----LTGL-DKAATAAKYGEEQRVHRDTIGLEDHAY 263 (325)
Q Consensus 190 ~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~i~~~~~L~E~~~G~----~eG~-~~~e~~~~~~~~~~~w~~~~~~~~~~~ 263 (325)
+|.|||||..||+|||..+.+.++ ...+.+.++|.|-|...=. +... +.+++... ++.
T Consensus 92 i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is~~el~~~----------~~~------ 155 (272)
T KOG3734|consen 92 IDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFISPDELKFP----------GFP------ 155 (272)
T ss_pred cceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCCHHHHhcc----------CCC------
Confidence 999999999999999999999887 2347788899998875321 1111 12222211 111
Q ss_pred cccccCCcccCCCCCCCCCCCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCcc
Q psy11843 264 YSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNK 323 (325)
Q Consensus 264 ~~~~~~~~~y~~~~~~~~~p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir 323 (325)
.|..|.. .....+-.+||++++.+|+...++.|+ ...+++++|||+||.++-
T Consensus 156 -----VD~~y~P-~~~~~~~~~es~e~~~~R~~~~~k~i~--~k~~~~~lLIV~H~~sv~ 207 (272)
T KOG3734|consen 156 -----VDLNYDP-VYKETPRWGESLEDCNDRIQKVFKAIA--DKYPNENLLIVAHGSSVD 207 (272)
T ss_pred -----cccccch-hhhhcccccccHHHHHHHHHHHHHHHH--HhcCCCceEEEeccchHH
Confidence 1222221 001235579999999999999999977 446778899999998764
No 38
>KOG4609|consensus
Probab=99.69 E-value=3.9e-17 Score=140.11 Aligned_cols=87 Identities=28% Similarity=0.291 Sum_probs=71.6
Q ss_pred cCCCCCCCccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHH
Q psy11843 122 AGSRKSLNLHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRA 201 (325)
Q Consensus 122 ~~~r~~~~~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra 201 (325)
-+..|+.+.++|+||||||... .|..+ .||+.|++||+.+|++|.+.+++||.|..|.|.||
T Consensus 86 le~~kakatRhI~LiRHgeY~~-----------------~g~~~-hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA 147 (284)
T KOG4609|consen 86 LEEKKAKATRHIFLIRHGEYHV-----------------DGSLE-HLTELGREQAELTGKRLAELGLKFDKVVASTMVRA 147 (284)
T ss_pred HHHhhhhhhceEEEEeccceec-----------------cCchh-hcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhh
Confidence 4456677889999999997221 11222 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCccccccchh
Q psy11843 202 QNTLKAILKGIGQEDLPVHKSWRLNE 227 (325)
Q Consensus 202 ~qTA~~i~~~~~~~~~~i~~~~~L~E 227 (325)
++||.||+++++ +++.....+.|+|
T Consensus 148 ~ETadIIlk~l~-d~lk~~s~~ll~E 172 (284)
T KOG4609|consen 148 TETADIILKHLP-DDLKRVSCPLLRE 172 (284)
T ss_pred HHHHHHHHHhCC-Cccceeccccccc
Confidence 999999999997 4466666676776
No 39
>PRK01112 phosphoglyceromutase; Provisional
Probab=99.68 E-value=2.2e-17 Score=148.05 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=80.4
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
|++|||||||+|+||..++++||.|+|||+.|+.||..+. +.+++ .+++..+|| +.||..||
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~--------~~L~~------~~~d~iysSpl~Ra~qTA--- 63 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAG--------EKIKD------LPIDCIFTSTLVRSLMTA--- 63 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCCCCcCHHHHHHHHHHH--------HHhhc------CCCCEEEEcCcHHHHHHH---
Confidence 6789999999999999999999999999999999999886 44554 456666788 99999999
Q ss_pred HHHHHHHHHHHHHHh-----------------------------hccCCCCCCccccccccCCCCCCCccCCCCCC
Q psy11843 82 CLDVIVLAILAFILA-----------------------------TRHIKLQPEPLYGEINNAYGDNNSVAGSRKSL 128 (325)
Q Consensus 82 ~~~~~~~~~l~~i~~-----------------------------~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~~~ 128 (325)
..+.. ....+++.++.++|+|||.|||++..+..+..
T Consensus 64 ----------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~ 129 (228)
T PRK01112 64 ----------LLAMTNHSSGKIPYIVHEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKF 129 (228)
T ss_pred ----------HHHHHhhcccccccccccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHC
Confidence 33321 23456667789999999999999888865433
No 40
>KOG4754|consensus
Probab=99.68 E-value=1.5e-16 Score=136.55 Aligned_cols=168 Identities=11% Similarity=-0.012 Sum_probs=118.6
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCC--cCEEEecCcHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFK--FDVAHTSVLTRAQNTLKA 207 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~--~~~i~sSpl~Ra~qTA~~ 207 (325)
-|+|||||||+..++.-.+-+- ..+....+.|+.||+.|++|+..++..+...+++ ++.|++|||+||+|||.+
T Consensus 14 ~KtiyLvRHgQg~HNV~g~~~h----~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~ 89 (248)
T KOG4754|consen 14 CKTIYLVRHGQGIHNVAGEEDH----KAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVI 89 (248)
T ss_pred ceEEEEEeccccccccCcccch----hhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHH
Confidence 4789999999855444311111 1122234789999999999999999998877676 999999999999999999
Q ss_pred HHHhcC----CCCCCccccccc----hh-h-ccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCC
Q psy11843 208 ILKGIG----QEDLPVHKSWRL----NE-R-HYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEP 277 (325)
Q Consensus 208 i~~~~~----~~~~~i~~~~~L----~E-~-~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~ 277 (325)
...... ...+|+.+.|.+ +| + +..+-.|....+..+.||...+ ....+. .++.|
T Consensus 90 ~f~~~~~e~g~~~~p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~~DF------s~~~~d------v~~~~---- 153 (248)
T KOG4754|consen 90 AFGGYLAEDGEDPAPVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPAYDF------SLCETD------VDPLK---- 153 (248)
T ss_pred HhcceeccCCCcCCceeecchHHHHHHHHhCCCcccccchhHHHHhhcccccc------eeeccC------cchhc----
Confidence 876553 234788889998 77 2 4455566778888887774322 111110 11222
Q ss_pred CCCCCCCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCcc
Q psy11843 278 SKEEFPMFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNK 323 (325)
Q Consensus 278 ~~~~~p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir 323 (325)
.+-..|+.++...|-..+++.+. ..+.+.|.||||++-++
T Consensus 154 ---~pdy~ed~e~~a~r~re~~~~l~---~r~ek~iavvths~fl~ 193 (248)
T KOG4754|consen 154 ---KPDYREDDEESAARSREFLEWLA---KRPEKEIAVVTHSGFLR 193 (248)
T ss_pred ---cCcchhhHHHHHHhHHHHHHHHH---hCccceEEEEEehHHHH
Confidence 23457999999999999999843 23456799999999876
No 41
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.68 E-value=4.8e-17 Score=143.69 Aligned_cols=102 Identities=19% Similarity=0.263 Sum_probs=85.9
Q ss_pred CceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHH
Q psy11843 2 AKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAII 80 (325)
Q Consensus 2 ~~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~ 80 (325)
+|++|||||||||.||..+++||+.|+|||+.|+.||..+. +.++.. ...++..+|| +.||..||
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~--------~~l~~~----~~~~~~i~sS~l~Ra~~TA-- 66 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQGWTDSPLTEEGRAQAEALA--------ERLAAR----DIGFDAIYSSPLKRAQQTA-- 66 (208)
T ss_pred CceEEEEEecCCccccccccccCCCCCCCCHHHHHHHHHHH--------HHHhhc----CCCCCEEEECchHHHHHHH--
Confidence 47789999999999999999999999999999999999986 555531 1445555677 99999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCCCC
Q psy11843 81 GCLDVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRKSL 128 (325)
Q Consensus 81 ~~~~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~~~ 128 (325)
..++.....++..++.++|+|+|.|||.+..+..+..
T Consensus 67 -----------~~~a~~~~~~~~~~~~l~E~~~G~~eg~~~~e~~~~~ 103 (208)
T COG0406 67 -----------EPLAEELGLPLEVDDRLREIDFGDWEGLTIDELAEEP 103 (208)
T ss_pred -----------HHHHHhcCCCceecCCeeEeecccccCCcHHHHHHhC
Confidence 8888787777888999999999999999888876543
No 42
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.67 E-value=7.1e-16 Score=130.83 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=59.0
Q ss_pred ceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHh
Q psy11843 132 PVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKG 211 (325)
Q Consensus 132 ~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~ 211 (325)
+|||||||+ +.|+. .++.|.|||++|++||+.++.+|++.++.+|.|||||+.||+|||+++++.
T Consensus 2 ~l~lvRHg~------a~~~~---------~~d~~rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~ 66 (159)
T PRK10848 2 QVFIMRHGD------AALDA---------ASDSVRPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGEC 66 (159)
T ss_pred EEEEEeCCC------CCCCC---------CCCcCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHH
Confidence 599999998 65653 136678999999999999999999877789999999999999999999988
Q ss_pred cC
Q psy11843 212 IG 213 (325)
Q Consensus 212 ~~ 213 (325)
++
T Consensus 67 ~~ 68 (159)
T PRK10848 67 LN 68 (159)
T ss_pred hC
Confidence 76
No 43
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=99.67 E-value=8.3e-17 Score=141.46 Aligned_cols=95 Identities=18% Similarity=0.269 Sum_probs=79.2
Q ss_pred eEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGC 82 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~ 82 (325)
|+|||||||+|+||..++++|+.|+|||+.|+.||..+. ..++. .+++..+|| +.||..||
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~--------~~l~~------~~~~~i~sSpl~Ra~qTA---- 62 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAPTPLTARGIEQAQNLH--------TLLRD------VPFDLVLCSELERAQHTA---- 62 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCCCCcCHHHHHHHHHHH--------HHHhC------CCCCEEEECchHHHHHHH----
Confidence 579999999999999999999999999999999998886 44443 344555777 99999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCC
Q psy11843 83 LDVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSR 125 (325)
Q Consensus 83 ~~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r 125 (325)
..+....++++..++.++|+|||.|||++..+..
T Consensus 63 ---------~~i~~~~~~~~~~~~~L~E~~~G~~eg~~~~~~~ 96 (199)
T PRK15004 63 ---------RLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLM 96 (199)
T ss_pred ---------HHHHhcCCCCceeChhheeCCCcccCCCCHHHHH
Confidence 6665556677778889999999999999876543
No 44
>PRK13462 acid phosphatase; Provisional
Probab=99.66 E-value=1e-16 Score=141.42 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=74.4
Q ss_pred CceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCcccc--CCCcc-chHHHHHH
Q psy11843 2 AKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYN--LGQCD-IKWAYILA 78 (325)
Q Consensus 2 ~~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~--~g~c~-~~~a~~~a 78 (325)
-|++|||||||||+||.+++++|+.|+|||+.|+.||..+. +.+++ ..++ ..+|| +.||..||
T Consensus 4 ~~~~i~LvRHG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~--------~~l~~------~~~~~~~i~sSpl~Ra~qTA 69 (203)
T PRK13462 4 RNHRLLLLRHGETEWSKSGRHTGRTELELTETGRTQAELAG--------QALGE------LELDDPLVISSPRRRALDTA 69 (203)
T ss_pred cccEEEEEeCCCCCcccCCCccCCCCCCCCHHHHHHHHHHH--------HHHHh------CCCCCCEEEECchHHHHHHH
Confidence 47899999999999999999999999999999999998886 44443 1222 24666 99999998
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCC-CCCccccccccCCCCCCCccCCCC
Q psy11843 79 IIGCLDVIVLAILAFILATRHIKL-QPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 79 ~~~~~~~~~~~~l~~i~~~r~~~~-~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..+ +.+. ..++.++|+|||.|||++..+..+
T Consensus 70 -------------~~i----~~~~~~~~~~LrE~~~G~~eG~~~~ei~~ 101 (203)
T PRK13462 70 -------------KLA----GLTVDEVSGLLAEWDYGSYEGLTTPQIRE 101 (203)
T ss_pred -------------HHh----cCcccccCccccccCCccccCCcHHHHHH
Confidence 332 1222 457889999999999998877543
No 45
>KOG0234|consensus
Probab=99.66 E-value=2.4e-16 Score=149.58 Aligned_cols=151 Identities=19% Similarity=0.169 Sum_probs=117.5
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcC-EEEecCcHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFD-VAHTSVLTRAQNTLKAI 208 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~-~i~sSpl~Ra~qTA~~i 208 (325)
.+.|+|.|||| +++|.. .+ +..|++|+++|.+-|+.+.+++.+.. ..| .||||++.||+|||+.
T Consensus 239 pR~i~l~r~ge------S~~n~~-----gr--iggds~ls~~g~~ya~~l~~f~~~~~-~~dl~vwts~~~rti~ta~~- 303 (438)
T KOG0234|consen 239 PRTIYLTRHGE------SEFNVE-----GR--IGGDSPLSERGSQYAKSLIKFVEEQS-SSDLDVWTSQRKRTIQTAEG- 303 (438)
T ss_pred CceEEEEecCC------Cccccc-----cc--cCCcccccHHHHHHHHHHHHHHhhhc-ccCceeccchHHHHhhhHhh-
Confidence 46899999998 666553 22 25578999999999999999998753 455 8999999999999983
Q ss_pred HHhcCCCCCCccccccchhhccCCCCCCcHHHHHHhhchhHHHhhhccCcccccccccccCCcccCCCCCCCCCCCCCCH
Q psy11843 209 LKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESL 288 (325)
Q Consensus 209 ~~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~p~gES~ 288 (325)
++.. ..+..+..|+|++.|.++|++.+++.+.||+++..-. ...| ....|+||||
T Consensus 304 ---l~~~-~~~~~~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~----------------~dky-----~yry~~gESy 358 (438)
T KOG0234|consen 304 ---LKLD-YSVEQWKALDEIDAGVCEGLTYEEIETNYPEEFALRD----------------KDKY-----RYRYPGGESY 358 (438)
T ss_pred ---cCcc-hhhhhHhhcCcccccccccccHHHHHHhCchhhhhcc----------------CCcc-----eeecCCCCCH
Confidence 3311 1246778899999999999999999999998764111 1112 2356899999
Q ss_pred HHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccCC
Q psy11843 289 KLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKKV 325 (325)
Q Consensus 289 ~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~~ 325 (325)
.|+..|+...+.++- ...+|||+||..++|++
T Consensus 359 ~D~v~RlePvImElE-----r~~~Vlvi~Hqavircl 390 (438)
T KOG0234|consen 359 SDLVQRLEPVIMELE-----RQENVLVITHQAVIRCL 390 (438)
T ss_pred HHHHHhhhhHhHhhh-----hcccEEEEecHHHHHHH
Confidence 999999999998832 22449999999999864
No 46
>PF10242 L_HGMIC_fpl: Lipoma HMGIC fusion partner-like protein; InterPro: IPR019372 This is a group of proteins expressed from a series of genes referred to as Lipoma HGMIC fusion partner-like. The proteins carry four highly conserved transmembrane domains. In certain instances, as in LHFPL5, mutations cause deafness in humans [] or hypospadias []. LHFPL1 is transcribed in six liver tumour cell lines [].
Probab=99.65 E-value=1.3e-16 Score=137.97 Aligned_cols=76 Identities=42% Similarity=1.066 Sum_probs=71.7
Q ss_pred CcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy11843 20 NLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCDIKWAYILAIIGCLDVIVLAILAFILATR 98 (325)
Q Consensus 20 ~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~~~~a~~~a~~~~~~~~~~~~l~~i~~~r 98 (325)
.+++||... .+|.....++.+||.||++++||++||+.+++|++|+|++||||++|++|++++++|+++++++++|
T Consensus 106 ~~i~g~~Q~---~A~l~~~~g~~~yP~Gw~s~~v~~~CG~~s~~y~~g~C~~gwa~~la~~~~~~~~~l~~~~~~l~~~ 181 (181)
T PF10242_consen 106 FKICGWLQF---VAGLCLLLGCLLYPAGWDSPEVRQLCGPDSDPYKLGDCSLGWAYYLAIIGVADALLLSFLAFVLSNR 181 (181)
T ss_pred eeechHHHH---HHHHHHHHhheeecCccCCcHHHhhhcCCCCceeCCCCCCChHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 478899863 6899999999999999999999999999999999999999999999999999999999999999875
No 47
>PRK01295 phosphoglyceromutase; Provisional
Probab=99.64 E-value=1.8e-16 Score=140.21 Aligned_cols=99 Identities=24% Similarity=0.398 Sum_probs=80.1
Q ss_pred eEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGC 82 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~ 82 (325)
.+|||||||+|++|..++++||.|+|||+.|+.||..+. ..+++. ..+++..+|| +.||..||
T Consensus 3 ~~i~LVRHGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~--------~~L~~~----~~~~d~i~sSpl~Ra~qTA---- 66 (206)
T PRK01295 3 RTLVLVRHGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAG--------RKLKAA----GLKFDIAFTSALSRAQHTC---- 66 (206)
T ss_pred ceEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHH--------HHHHhC----CCCCCEEEeCCcHHHHHHH----
Confidence 359999999999999999999999999999999998886 445431 1345556677 99999999
Q ss_pred HHHHHHHHHHHHHhhcc---CCCCCCccccccccCCCCCCCccCCCCC
Q psy11843 83 LDVIVLAILAFILATRH---IKLQPEPLYGEINNAYGDNNSVAGSRKS 127 (325)
Q Consensus 83 ~~~~~~~~l~~i~~~r~---~~~~~~~~~~E~~~g~~~~~s~~~~r~~ 127 (325)
..+....+ .++..++.++|+|||.|+|++..+.++.
T Consensus 67 ---------~~i~~~~~~~~~~~~~~~~L~E~~~G~~eg~~~~e~~~~ 105 (206)
T PRK01295 67 ---------QLILEELGQPGLETIRDQALNERDYGDLSGLNKDDARAK 105 (206)
T ss_pred ---------HHHHHHcCCCCCCeEECCcccccccccccCCcHHHHHHH
Confidence 66655443 6677788999999999999988776543
No 48
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.64 E-value=1.8e-16 Score=140.91 Aligned_cols=95 Identities=20% Similarity=0.235 Sum_probs=78.6
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
|++|||||||+|+||..++++|+.|+|||+.|+.||..+. ..+++ ..++..+|| +.||..||
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~--------~~l~~------~~~~~I~sSpl~Ra~qTA--- 63 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVA--------ERAKE------LGITHIISSDLGRTRRTA--- 63 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCCCCcCHHHHHHHHHHH--------HHHhc------CCCCEEEECCcHHHHHHH---
Confidence 5789999999999999999999999999999999998886 44443 233445677 99999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCC
Q psy11843 82 CLDVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGS 124 (325)
Q Consensus 82 ~~~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~ 124 (325)
..+....+.++..++.++|+|+|.|||.+..+.
T Consensus 64 ----------~~i~~~~~~~~~~~~~L~E~~~G~~eg~~~~~~ 96 (215)
T PRK03482 64 ----------EIIAQACGCDIIFDPRLRELNMGVLEKRHIDSL 96 (215)
T ss_pred ----------HHHHHhcCCCeeEChhccccCCccccCCcHHHH
Confidence 555555567777889999999999999977553
No 49
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.64 E-value=1.9e-16 Score=143.73 Aligned_cols=99 Identities=23% Similarity=0.333 Sum_probs=80.1
Q ss_pred eEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGC 82 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~ 82 (325)
|+|||||||+|.||..++++|+.|+|||+.|+.||..+. +.+++. ...++..+|| +.||..||
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D~pLte~G~~QA~~la--------~~L~~~----~~~~d~IysSpl~Ra~qTA---- 64 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTDVDLSEKGVSEAKAAG--------KLLKEE----GYTFDVAYTSVLKRAIRTL---- 64 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCCCCcCHHHHHHHHHHH--------HHHHhc----CCCCCEEEEcCCHHHHHHH----
Confidence 579999999999999999999999999999999999886 444431 1244556777 99999999
Q ss_pred HHHHHHHHHHHHHhhcc---CCCCCCccccccccCCCCCCCccCCCCC
Q psy11843 83 LDVIVLAILAFILATRH---IKLQPEPLYGEINNAYGDNNSVAGSRKS 127 (325)
Q Consensus 83 ~~~~~~~~l~~i~~~r~---~~~~~~~~~~E~~~g~~~~~s~~~~r~~ 127 (325)
..+....+ +++..++.++|+|||.|||++..+..+.
T Consensus 65 ---------~~i~~~~~~~~~~~~~~~~L~E~~fG~~eG~~~~ei~~~ 103 (247)
T PRK14115 65 ---------WIVLDELDQMWLPVEKSWRLNERHYGALQGLNKAETAAK 103 (247)
T ss_pred ---------HHHHHHcCCCCCCceECccccccccccccCCCHHHHHHH
Confidence 66655444 3666788999999999999998877543
No 50
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.64 E-value=2.9e-16 Score=142.29 Aligned_cols=98 Identities=28% Similarity=0.339 Sum_probs=78.6
Q ss_pred eEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGC 82 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~ 82 (325)
|+|||||||||+||..++++|+.|+|||+.|+.||..+. +.+++. ...++..+|| +.||..||
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la--------~~L~~~----~~~~d~iysSpl~Ra~qTA---- 64 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVDVKLSEKGQQEAKRAG--------ELLKEE----GYEFDVAYTSLLKRAIHTL---- 64 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCCCCcCHHHHHHHHHHH--------HHHHhc----CCCCCEEEEcChHHHHHHH----
Confidence 579999999999999999999999999999999998886 445431 1234555777 99999999
Q ss_pred HHHHHHHHHHHHHhhcc---CCCCCCccccccccCCCCCCCccCCCC
Q psy11843 83 LDVIVLAILAFILATRH---IKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 83 ~~~~~~~~l~~i~~~r~---~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..+....+ .++..++.++|+|||.|||.+..+...
T Consensus 65 ---------~ii~~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~ei~~ 102 (245)
T TIGR01258 65 ---------NIALDELDQLWIPVKKSWRLNERHYGALQGLNKAETAA 102 (245)
T ss_pred ---------HHHHHhcCCCCCCeeeCcccccccCCCCcCCCHHHHHH
Confidence 55544443 456667889999999999998887654
No 51
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.62 E-value=4.1e-16 Score=137.57 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=79.2
Q ss_pred EEEEEecCCCcccccCcEEEec-CCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHH
Q psy11843 5 VIVMVRHGESEWNQKNLFCGWY-DAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGC 82 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~~~~G~~-d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~ 82 (325)
+|||||||||+||.+++++|+. |+|||+.|+.||..+. +.++. .+++..+|| +.||..||
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~--------~~l~~------~~~~~i~sSpl~Ra~qTA---- 62 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALA--------ERLAD------LPIAAIVSSPLERCRETA---- 62 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHH--------HHHhc------CCCCEEEeCcHHHHHHHH----
Confidence 5899999999999999999999 5999999999999886 44443 345556777 99999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCC
Q psy11843 83 LDVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 83 ~~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..+....+.++..++.++|+|||.|||++..+..+
T Consensus 63 ---------~~i~~~~~~~~~~~~~L~E~~~G~~eG~~~~e~~~ 97 (204)
T TIGR03848 63 ---------EPIAEARGLPPRVDERLGECDYGDWTGRELKELAK 97 (204)
T ss_pred ---------HHHHHhcCCCceECcccccCCCCeeCCcCHHHHhC
Confidence 66665566788888999999999999998777543
No 52
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.61 E-value=1.3e-15 Score=128.19 Aligned_cols=71 Identities=25% Similarity=0.310 Sum_probs=63.1
Q ss_pred ccceEEecCCCccccccccccccccCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHH
Q psy11843 130 LHPVMLMPQGVHEQDRFSEFSNRTANSKSSRYARPEYPSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAIL 209 (325)
Q Consensus 130 ~~~i~lvRHGe~~~~~~t~~n~~~~~~~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~ 209 (325)
|++|||||||+ ++|...+ ..+.|.|||++|+++++.+|++|++.++.||.|+|||..||+|||++++
T Consensus 1 m~~L~LmRHgk------A~~~~~~-------~~D~dR~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~ 67 (163)
T COG2062 1 MMRLYLMRHGK------AEWAAPG-------IADFDRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVA 67 (163)
T ss_pred CceEEEeeccc------ccccCCC-------CCCccCcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHH
Confidence 46899999998 5554421 3388999999999999999999999999999999999999999999999
Q ss_pred HhcC
Q psy11843 210 KGIG 213 (325)
Q Consensus 210 ~~~~ 213 (325)
++++
T Consensus 68 ~~~~ 71 (163)
T COG2062 68 EHLG 71 (163)
T ss_pred HhhC
Confidence 9987
No 53
>KOG0235|consensus
Probab=99.59 E-value=9.6e-16 Score=134.25 Aligned_cols=99 Identities=27% Similarity=0.410 Sum_probs=81.6
Q ss_pred CCceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCc--c-chHHHHH
Q psy11843 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQC--D-IKWAYIL 77 (325)
Q Consensus 1 ~~~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c--~-~~~a~~~ 77 (325)
|...+++|||||||+||.+++||||.|.+||+.|..||.... ..+++ ..+....| | +.||..|
T Consensus 3 ~~~~~lvlvRHGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~--------~~l~~------~~~~~~~~~tS~l~RakqT 68 (214)
T KOG0235|consen 3 SNTFRLVLVRHGESEWNKENIFQGWIDAPLTEKGEEQAKAAA--------QRLKD------LNIEFDVCYTSDLKRAKQT 68 (214)
T ss_pred CcceEEEEEecCchhhhhhCcccccccCccChhhHHHHHHHH--------HHHHh------cCCcccEEecCHHHHHHHH
Confidence 567889999999999999999999999999999999988875 55665 22222233 5 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc---CCCCCCccccccccCCCCCCCccCCCC
Q psy11843 78 AIIGCLDVIVLAILAFILATRH---IKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 78 a~~~~~~~~~~~~l~~i~~~r~---~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
| ..|+.... +++..+..++|=++|.++|+...+..+
T Consensus 69 ~-------------~~il~~~~~~~~pv~~~~~L~ER~yG~l~Gl~~~e~~~ 107 (214)
T KOG0235|consen 69 A-------------ELILEELKQKKVPVLYTWRLNERHYGDLQGLNKRETAK 107 (214)
T ss_pred H-------------HHHHHhhccCCcceEechhhchhhhccccCccHHHHHH
Confidence 8 77777666 788888999999999999998776654
No 54
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.53 E-value=7e-15 Score=126.78 Aligned_cols=158 Identities=18% Similarity=0.242 Sum_probs=110.1
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
|++|+|+||||++||.+++|+||.|++||++|..+|.... ..+++.| ..|+.++.| |.||..|.
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag--------~llk~~~----~~~dia~TS~L~RAi~T~--- 65 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVDVDLTEKGISEAKAAG--------KLLKEEG----LEFDIAYTSVLKRAIKTL--- 65 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeeecCcchhhHHHHHHHH--------HHHHHcC----CCcceeehHHHHHHHHHH---
Confidence 6789999999999999999999999999999999998874 7888877 667777777 99998876
Q ss_pred HHHHHHHHHHHHHHhhc---cCCCCCCccccccccCCCCCCCccCCCCCCCccceEEecCCC-ccccccccccccccCC-
Q psy11843 82 CLDVIVLAILAFILATR---HIKLQPEPLYGEINNAYGDNNSVAGSRKSLNLHPVMLMPQGV-HEQDRFSEFSNRTANS- 156 (325)
Q Consensus 82 ~~~~~~~~~l~~i~~~r---~~~~~~~~~~~E~~~g~~~~~s~~~~r~~~~~~~i~lvRHGe-~~~~~~t~~n~~~~~~- 156 (325)
-+++... -+++..+-++.|=+.|.+-|...++..+.-....|.+.|-.. ..+.....-+......
T Consensus 66 ----------~i~L~e~d~~~ipv~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d 135 (230)
T COG0588 66 ----------NIVLEESDQLWIPVIKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRD 135 (230)
T ss_pred ----------HHHhhhhcccCcchhhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccccc
Confidence 6666554 455555668899999999999888877666555555554442 1111111111100000
Q ss_pred -CCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q psy11843 157 -KSSRYARPEYPSSLNSVNEAEAAGVALAK 185 (325)
Q Consensus 157 -~~~~~g~~d~~Lt~~G~~qa~~~~~~l~~ 185 (325)
.+..-.....|+||.++.-.+++--++.+
T Consensus 136 ~ry~~~~~~~~p~~EsLkdt~~Rv~Pyw~~ 165 (230)
T COG0588 136 RRYAHLDIGGLPLTESLKDTVERVLPYWED 165 (230)
T ss_pred cccccccccCCCccchHHHHHHHhhHHHHH
Confidence 11112234567888888888877766664
No 55
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.53 E-value=1.2e-14 Score=139.59 Aligned_cols=98 Identities=13% Similarity=0.087 Sum_probs=80.4
Q ss_pred CceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHH
Q psy11843 2 AKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAII 80 (325)
Q Consensus 2 ~~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~ 80 (325)
+|++|||||||+|++|..++++|+.|.|||+.|+.||..+. ..+++. .+++..+|| +.||..||
T Consensus 170 ~~~~i~LvRHGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~--------~~l~~~-----~~~d~i~sSpl~Ra~qTA-- 234 (372)
T PRK07238 170 TPTRLLLLRHGQTELSVQRRYSGRGNPELTEVGRRQAAAAA--------RYLAAR-----GGIDAVVSSPLQRARDTA-- 234 (372)
T ss_pred CceEEEEEeCCCCCcccCCeeeCCCCCCcCHHHHHHHHHHH--------HHHhcc-----CCCCEEEECChHHHHHHH--
Confidence 56889999999999999999999999999999999998885 444442 134455667 99999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCC
Q psy11843 81 GCLDVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSR 125 (325)
Q Consensus 81 ~~~~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r 125 (325)
..+....+.++..++.++|++||.|||++..+..
T Consensus 235 -----------~~i~~~~~~~~~~~~~L~E~~~G~~eg~~~~ei~ 268 (372)
T PRK07238 235 -----------AAAAKALGLDVTVDDDLIETDFGAWEGLTFAEAA 268 (372)
T ss_pred -----------HHHHHhcCCCcEECccceeCCCCccCCCCHHHHH
Confidence 5565555677777889999999999999877654
No 56
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.52 E-value=1e-14 Score=125.51 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=75.6
Q ss_pred EEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHHHH
Q psy11843 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGCLD 84 (325)
Q Consensus 6 ~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~~~ 84 (325)
|||||||||++|..+++ |+.|+|||+.|+.||..+. +.++. ..++...|| +.||..||
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~d~~Lt~~G~~qa~~l~--------~~l~~------~~~~~i~sSpl~Ra~qTA------ 59 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQTDVPLAEKGAEQAAALR--------EKLAD------VPFDAVYSSPLSRCRELA------ 59 (177)
T ss_pred CEEEeCCCCccCCCcee-CCCCCCcChhHHHHHHHHH--------HHhcC------CCCCEEEECchHHHHHHH------
Confidence 69999999999999999 9999999999999998886 33332 234445666 99999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCC
Q psy11843 85 VIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRK 126 (325)
Q Consensus 85 ~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~ 126 (325)
..+....+.++..++.++|+++|.|+|.+..+..+
T Consensus 60 -------~~i~~~~~~~~~~~~~L~E~~~G~~~g~~~~~~~~ 94 (177)
T TIGR03162 60 -------EILAERRGLPIIKDPRLREMDFGDWEGRSWDEIPE 94 (177)
T ss_pred -------HHHHhhcCCCceECCccccccCCccCCCCHHHHHH
Confidence 66666666777788899999999999987665443
No 57
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.48 E-value=2.5e-14 Score=146.79 Aligned_cols=112 Identities=12% Similarity=0.050 Sum_probs=77.5
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIG 81 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~ 81 (325)
+++|||||||||+||.+++++| |+|||+.|+.||..+. +.+++... ..++..+|| +.||..||-+-
T Consensus 419 ~m~i~LiRHGeT~~n~~~r~~G--d~pLt~~G~~qA~~l~--------~~l~~~~~---~~~~~V~sSpl~Ra~~TA~~i 485 (664)
T PTZ00322 419 PMNLYLTRAGEYVDLLSGRIGG--NSRLTERGRAYSRALF--------EYFQKEIS---TTSFTVMSSCAKRCTETVHYF 485 (664)
T ss_pred CceEEEEecccchhhhcCccCC--CCccCHHHHHHHHHHH--------HHHHhccC---CCCcEEEcCCcHHHHHHHHHH
Confidence 4689999999999999999999 8999999999999886 44554321 112233555 99999999221
Q ss_pred HHHHHH----HHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCCC
Q psy11843 82 CLDVIV----LAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRKS 127 (325)
Q Consensus 82 ~~~~~~----~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~~ 127 (325)
.-...- -.....+.+..++++..++.++|||||.|||++..+.++.
T Consensus 486 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~ 535 (664)
T PTZ00322 486 AEESILQQSTASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRT 535 (664)
T ss_pred HhccccccccccccccccccccccccchhhhCcCCCcccCCCCHHHHHHh
Confidence 000000 0000112233566777888999999999999998886543
No 58
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.40 E-value=4.2e-13 Score=112.95 Aligned_cols=95 Identities=17% Similarity=0.208 Sum_probs=73.4
Q ss_pred EEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHHH
Q psy11843 5 VIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGCL 83 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~~ 83 (325)
+|||||||+|.+|..++++|+.|.|||+.|+.||..+. +.++..- ...+....|| +.||..||
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a--------~~l~~~~---~~~~~~i~sSpl~Ra~qTa----- 64 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTDSPLTELGRAQAEALG--------ELLASLG---RLRFDVIYSSPLLRARETA----- 64 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCCCCCCHHHHHHHHHHH--------HHHHhcc---CCCCCEEEeCchHHHHHHH-----
Confidence 58999999999999999999999999999999998886 4444310 1233344566 99999998
Q ss_pred HHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCC
Q psy11843 84 DVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGS 124 (325)
Q Consensus 84 ~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~ 124 (325)
..+......++ .++.++|+++|.|+|++..+.
T Consensus 65 --------~~i~~~~~~~~-~~~~L~E~~~G~~~g~~~~~~ 96 (155)
T smart00855 65 --------EALAIALGLGE-VDPRLRERDYGAWEGLTKEEE 96 (155)
T ss_pred --------HHHHHhcCCCC-CChhhhhcccceecCCcHHHH
Confidence 55554444443 667899999999999887554
No 59
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.29 E-value=1.2e-12 Score=109.47 Aligned_cols=99 Identities=19% Similarity=0.200 Sum_probs=76.3
Q ss_pred EEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHHH
Q psy11843 5 VIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGCL 83 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~~ 83 (325)
||||||||++++|..++++|+.|.|||+.|+.||..+. ..+++. ...++...|| +.|+..||
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~--------~~l~~~----~~~~~~i~~Sp~~R~~qTA----- 63 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSDPPLTERGREQARQLG--------EYLAER----DIQIDVIYSSPLRRCIQTA----- 63 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHH--------HHHHHT----TSSCSEEEEESSHHHHHHH-----
T ss_pred CEEEEECCccccccCCCcCCCCCccccHHHHHHHHhhc--------cccccc----ccCceEEecCCcchhhhhh-----
Confidence 69999999999999999999999999999999998886 445531 1333334566 99999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCCCC
Q psy11843 84 DVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRKSL 128 (325)
Q Consensus 84 ~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~~~ 128 (325)
..+....+.++..++.++|+++|.|++.+.....+..
T Consensus 64 --------~~~~~~~~~~~~~~~~l~E~~~g~~~g~~~~~~~~~~ 100 (158)
T PF00300_consen 64 --------EIIAEGLGIEIIVDPRLREIDFGDWEGRPFDEIEEKF 100 (158)
T ss_dssp --------HHHHHHHTSEEEEEGGGSCCGCGGGTTSBHHHHHHHH
T ss_pred --------chhhcccccccccccccccccchhhcccchhhHHhhh
Confidence 5555444577778889999999999888776665443
No 60
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=98.97 E-value=4.5e-10 Score=101.38 Aligned_cols=87 Identities=21% Similarity=0.234 Sum_probs=68.2
Q ss_pred ccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHHHHHHHHHHHHHH
Q psy11843 16 WNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGCLDVIVLAILAFI 94 (325)
Q Consensus 16 ~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~~~~~~~~~l~~i 94 (325)
||.++++|||+|+|||+.|+.||..+. +.+++. ...++..+|| +.||..|| ..+
T Consensus 1 ~N~~~~~qG~~D~pLTe~G~~QA~~l~--------~~L~~~----~~~~d~iysSpl~Ra~qTA-------------~~i 55 (236)
T PTZ00123 1 WNKENRFTGWTDVPLSEKGVQEAREAG--------KLLKEK----GFRFDVVYTSVLKRAIKTA-------------WIV 55 (236)
T ss_pred CcccCceeCCCCCCCCHHHHHHHHHHH--------HHHHhc----CCCCCEEEECChHHHHHHH-------------HHH
Confidence 799999999999999999999999886 555531 1334555666 99999999 666
Q ss_pred Hhhcc---CCCCCCccccccccCCCCCCCccCCCCC
Q psy11843 95 LATRH---IKLQPEPLYGEINNAYGDNNSVAGSRKS 127 (325)
Q Consensus 95 ~~~r~---~~~~~~~~~~E~~~g~~~~~s~~~~r~~ 127 (325)
....+ ++++.++.++|+|||.|||.+..+..+.
T Consensus 56 ~~~~~~~~~~~~~~~~L~E~~~G~~EG~~~~ei~~~ 91 (236)
T PTZ00123 56 LEELGQLHVPVIKSWRLNERHYGALQGLNKSETAEK 91 (236)
T ss_pred HHhcCCCCCCceeCchhhhcccccccCCCHHHHHHH
Confidence 54443 4666788999999999999988877543
No 61
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=98.82 E-value=6.6e-09 Score=86.87 Aligned_cols=81 Identities=30% Similarity=0.475 Sum_probs=61.5
Q ss_pred EEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHHHHH
Q psy11843 5 VIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAIIGCL 83 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~~~~ 83 (325)
+|||||||+|.+|..+++.|..|.|||+.|+.||..+. +.++..- ..++...|| +.|+..||
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~--------~~l~~~~----~~~~~i~~Sp~~Ra~qTa----- 63 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTDVPLTEKGREQARALG--------KRLKELG----IKFDRIYSSPLKRAIQTA----- 63 (153)
T ss_pred CEEEEECCCCcccccCcccCCCCCCCCHHHHHHHHHHH--------HHHHhcC----CCCCEEEECcHHHHHHHH-----
Confidence 58999999999999999999999999999999998875 4454421 123344666 99999999
Q ss_pred HHHHHHHHHHHHhhc-cCCCCCCccccc
Q psy11843 84 DVIVLAILAFILATR-HIKLQPEPLYGE 110 (325)
Q Consensus 84 ~~~~~~~l~~i~~~r-~~~~~~~~~~~E 110 (325)
..+.... ..++..++.++|
T Consensus 64 --------~~l~~~~~~~~~~~~~~L~e 83 (153)
T cd07067 64 --------EIILEELPGLPVEVDPRLRE 83 (153)
T ss_pred --------HHHHHhcCCCCceeCccchH
Confidence 5555443 556666777777
No 62
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=98.64 E-value=5.2e-08 Score=90.85 Aligned_cols=80 Identities=20% Similarity=0.140 Sum_probs=59.1
Q ss_pred eEEEEEecCCCcccccCcEEEecCCc---cCHHHHHHHHHhhhccCCCChHHHHHhhcCC--CccccCCCcc-chHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQ---LSEKALCMIASVVIYPLGWESAKAQEICGPT--ASRYNLGQCD-IKWAYIL 77 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~---L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~--~~~~~~g~c~-~~~a~~~ 77 (325)
++||||||||+.++ |+.|.+ ||+.|+.||..+. +.+++++... ...++..+|| +.||..|
T Consensus 103 ~~L~LVRHGq~~~~------~~~d~~~~~LTe~G~~QA~~lg--------~~L~~~~~~~~~~~~~d~IysSPL~RA~qT 168 (299)
T PTZ00122 103 RQIILVRHGQYINE------SSNDDNIKRLTELGKEQARITG--------KYLKEQFGEILVDKKVKAIYHSDMTRAKET 168 (299)
T ss_pred eEEEEEECCCCCCC------CCCCcccCCCCHHHHHHHHHHH--------HHHHHhhccccccCCCCEEEEcCcHHHHHH
Confidence 68999999997554 478887 9999999999886 5666644200 0145566777 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-cCCCCCCccccc
Q psy11843 78 AIIGCLDVIVLAILAFILATR-HIKLQPEPLYGE 110 (325)
Q Consensus 78 a~~~~~~~~~~~~l~~i~~~r-~~~~~~~~~~~E 110 (325)
| ..+.... ..+++.++.++|
T Consensus 169 A-------------eiIa~~~~~~~v~~d~~LrE 189 (299)
T PTZ00122 169 A-------------EIISEAFPGVRLIEDPNLAE 189 (299)
T ss_pred H-------------HHHHHhCCCCCceeCccccc
Confidence 9 5555444 467777888899
No 63
>PRK06193 hypothetical protein; Provisional
Probab=98.47 E-value=2e-07 Score=81.99 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=51.6
Q ss_pred eEEEEEecCCCcccccCcEEEec-----CCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWY-----DAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYIL 77 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~-----d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~ 77 (325)
.+|||||||+|++|.+++++|+. |.|||+.|+.|+..+. ..+++.. .+++...|| +.|+..|
T Consensus 43 ~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~--------~~L~~~~----~~~d~V~sSpl~Ra~qT 110 (206)
T PRK06193 43 GYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIG--------EAFRALA----IPVGKVISSPYCRAWET 110 (206)
T ss_pred CEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHH--------HHHHhcC----CCCCEEEECCcHHHHHH
Confidence 57999999999999999999987 4799999999998885 4455422 345556777 9999999
Q ss_pred H
Q psy11843 78 A 78 (325)
Q Consensus 78 a 78 (325)
|
T Consensus 111 A 111 (206)
T PRK06193 111 A 111 (206)
T ss_pred H
Confidence 8
No 64
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=98.47 E-value=2.4e-07 Score=76.89 Aligned_cols=62 Identities=31% Similarity=0.390 Sum_probs=50.5
Q ss_pred EEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHH
Q psy11843 5 VIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILA 78 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a 78 (325)
+|||||||++.+|..+++.|+.|.|||++|+.|+..+. ..+++.. .......|| ..|+..||
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~--------~~l~~~~----~~~~~v~sSp~~R~~~Ta 63 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGDGPLTEKGRQQARELG--------KALRERY----IKFDRIYSSPLKRAIQTA 63 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCCCCcCHHHHHHHHHHH--------HHHHHhC----CCCCEEEECChHHHHHHH
Confidence 48999999999999999999999999999999998885 5566532 122333566 99999999
No 65
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=98.45 E-value=2.9e-07 Score=78.02 Aligned_cols=59 Identities=8% Similarity=-0.082 Sum_probs=44.8
Q ss_pred eEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILA 78 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a 78 (325)
|+|||||||+++||.. +..|.|||+.|+.++..+. ..++... ..++...|| ..||..||
T Consensus 1 m~l~lvRHg~a~~~~~----~d~~rpLt~~G~~qa~~~~--------~~l~~~~----~~~d~i~sSp~~Ra~qTa 60 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----SDSVRPLTTCGCDESRLMA--------NWLKGQK----VDIERVLVSPYLRAEQTL 60 (159)
T ss_pred CEEEEEeCCCCCCCCC----CCcCCCcCHHHHHHHHHHH--------HHHHhCC----CCCCEEEECCHHHHHHHH
Confidence 4799999999999953 4556799999999998876 4444321 234555777 99999998
No 66
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=98.42 E-value=6.1e-07 Score=75.49 Aligned_cols=59 Identities=12% Similarity=-0.019 Sum_probs=46.7
Q ss_pred eEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHH
Q psy11843 4 YVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILA 78 (325)
Q Consensus 4 ~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a 78 (325)
|+|||||||+++||.. +..|.|||+.|+.++..+. ..+++.. ..++...|| ..||..||
T Consensus 1 m~l~LvRHg~a~~~~~----~d~dr~Lt~~G~~qa~~~~--------~~l~~~~----~~~d~i~sSp~~Ra~qTa 60 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----SDSVRPLTTNGCDESRLVA--------QWLKGQG----VEIERILVSPFVRAEQTA 60 (152)
T ss_pred CEEEEEeCCCcccccC----CCCCCCcCHHHHHHHHHHH--------HHHHhCC----CCCCEEEECCcHHHHHHH
Confidence 4799999999999875 7889999999999998876 4444421 234555677 99999998
No 67
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=98.23 E-value=9.5e-07 Score=77.22 Aligned_cols=106 Identities=14% Similarity=0.052 Sum_probs=65.1
Q ss_pred ceEEEEEecCCC-cccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHHHH
Q psy11843 3 KYVIVMVRHGES-EWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILAII 80 (325)
Q Consensus 3 ~~~~~~~rhg~t-~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a~~ 80 (325)
.++||||||||| .|+.. .+...+.|||+.|+.+|..+. ..+++. .+.+..+|| ..|+..||
T Consensus 54 ~~~L~LiRHGet~~~~~~--~~~sD~RpLTerG~~qA~~lg--------~~L~~~-----~~~d~I~sSpa~Ra~qTA-- 116 (201)
T PRK15416 54 HPVVVLFRHAERCDRSDN--QCLSDKTGITVKGTQDARELG--------KAFSAD-----IPDYDLYSSNTVRTIQSA-- 116 (201)
T ss_pred CCEEEEEeCccccCccCC--CCCCCCCCCCHHHHHHHHHHH--------HHHhCC-----CCCCEEEECCCHHHHHHH--
Confidence 467999999998 33311 111112479999999998886 444431 111344677 99999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCCCCCccceEEecCCC
Q psy11843 81 GCLDVIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRKSLNLHPVMLMPQGV 140 (325)
Q Consensus 81 ~~~~~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~~~~~~~i~lvRHGe 140 (325)
..+.. ..+++.++.+.|++.+..+... .-.++... ++|++|=|..
T Consensus 117 -----------e~ia~--~~~v~~~~~Lye~~~~~~~~i~-~~i~~~~~-~tVLIVGHnp 161 (201)
T PRK15416 117 -----------TWFSA--GKKLTVDKRLSDCGNGIYSAIK-DLQRKSPD-KNIVIFTHNH 161 (201)
T ss_pred -----------HHHhc--CCCcEecHHHhhcCchhHHHHH-HHHHhCCC-CEEEEEeCch
Confidence 44433 3456667788887766532110 00122222 7799999984
No 68
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=97.90 E-value=2e-05 Score=66.74 Aligned_cols=62 Identities=21% Similarity=0.213 Sum_probs=49.1
Q ss_pred ceEEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHHHH
Q psy11843 3 KYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYILA 78 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~~a 78 (325)
|++|||+|||+.+|-..+ +.-.|-+||++|+.++.... ..++. .-...++..|| -.||..||
T Consensus 1 m~~L~LmRHgkA~~~~~~--~~D~dR~Lt~~G~~ea~~~a--------~~L~~----~~~~~D~VL~Spa~Ra~QTa 63 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPG--IADFDRPLTERGRKEAELVA--------AWLAG----QGVEPDLVLVSPAVRARQTA 63 (163)
T ss_pred CceEEEeecccccccCCC--CCCccCcCCHHHHHHHHHHH--------HHHHh----cCCCCCEEEeChhHHHHHHH
Confidence 678999999999998654 34568899999999988875 44554 22456777888 99999998
No 69
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.84 E-value=2.4e-05 Score=70.53 Aligned_cols=48 Identities=15% Similarity=-0.023 Sum_probs=40.0
Q ss_pred CCCChhhHHHHHHHHHHHHHc---CC-------CcCEEEecCcHHHHHHHHHHHHhcC
Q psy11843 166 YPSSLNSVNEAEAAGVALAKA---GF-------KFDVAHTSVLTRAQNTLKAILKGIG 213 (325)
Q Consensus 166 ~~Lt~~G~~qa~~~~~~l~~~---~~-------~~~~i~sSpl~Ra~qTA~~i~~~~~ 213 (325)
..||..|++|+..+|++|++. .. ..-.++||+..||+|||+.++..+-
T Consensus 17 ~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl~ 74 (242)
T cd07061 17 GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGLF 74 (242)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHhcC
Confidence 359999999999999999863 11 1228999999999999999998875
No 70
>KOG4754|consensus
Probab=96.78 E-value=0.002 Score=56.35 Aligned_cols=66 Identities=17% Similarity=0.275 Sum_probs=46.3
Q ss_pred EEEEEecCCCcccccC-----cE--EEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCcc-chHHHH
Q psy11843 5 VIVMVRHGESEWNQKN-----LF--CGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCD-IKWAYI 76 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~-----~~--~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~-~~~a~~ 76 (325)
.|||||||+-..|..+ -| --|.|+-||+.|..|+..+..- ...+++- ....+..|| ++|+..
T Consensus 16 tiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~------~~A~qL~----~~ieliv~SPMrRtLq 85 (248)
T KOG4754|consen 16 TIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKH------LMAKQLP----NKIELIVVSPMRRTLQ 85 (248)
T ss_pred EEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhh------hhhhhcC----CceeEEEechHHHHHH
Confidence 4999999999888653 11 1267999999999999888632 2223322 234455666 999999
Q ss_pred HHHH
Q psy11843 77 LAII 80 (325)
Q Consensus 77 ~a~~ 80 (325)
|+++
T Consensus 86 T~v~ 89 (248)
T KOG4754|consen 86 TMVI 89 (248)
T ss_pred HHHH
Confidence 9844
No 71
>KOG0234|consensus
Probab=96.77 E-value=0.00096 Score=64.37 Aligned_cols=96 Identities=20% Similarity=0.222 Sum_probs=67.5
Q ss_pred EEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCccchHHHHHHHHHHHH
Q psy11843 5 VIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCDIKWAYILAIIGCLD 84 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~~~~a~~~a~~~~~~ 84 (325)
++||.||||++.|..+|+-| |++|++.|.+-|.++..| ..++.- .-+..=.|+..++..+|
T Consensus 241 ~i~l~r~geS~~n~~grigg--ds~ls~~g~~ya~~l~~f-------~~~~~~----~dl~vwts~~~rti~ta------ 301 (438)
T KOG0234|consen 241 TIYLTRHGESEFNVEGRIGG--DSPLSERGSQYAKSLIKF-------VEEQSS----SDLDVWTSQRKRTIQTA------ 301 (438)
T ss_pred eEEEEecCCCccccccccCC--cccccHHHHHHHHHHHHH-------Hhhhcc----cCceeccchHHHHhhhH------
Confidence 59999999999999988776 779999999999999744 222322 22334466788888887
Q ss_pred HHHHHHHHHHHhhccCCCCCCccccccccCCCCCCCccCCCCCC
Q psy11843 85 VIVLAILAFILATRHIKLQPEPLYGEINNAYGDNNSVAGSRKSL 128 (325)
Q Consensus 85 ~~~~~~l~~i~~~r~~~~~~~~~~~E~~~g~~~~~s~~~~r~~~ 128 (325)
.++.-.. .+..-..+.|||-|.++|++..++....
T Consensus 302 -------~~l~~~~--~~~~~~~Ldei~ag~~~g~t~eeI~~~~ 336 (438)
T KOG0234|consen 302 -------EGLKLDY--SVEQWKALDEIDAGVCEGLTYEEIETNY 336 (438)
T ss_pred -------hhcCcch--hhhhHhhcCcccccccccccHHHHHHhC
Confidence 4221111 1112236799999999999998876543
No 72
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=96.75 E-value=0.0053 Score=57.45 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=38.7
Q ss_pred CChhhHHHHHHHHHHHHHc--CCC-------cCEEEecCcHHHHHHHHHHHHhcC
Q psy11843 168 SSLNSVNEAEAAGVALAKA--GFK-------FDVAHTSVLTRAQNTLKAILKGIG 213 (325)
Q Consensus 168 Lt~~G~~qa~~~~~~l~~~--~~~-------~~~i~sSpl~Ra~qTA~~i~~~~~ 213 (325)
||+.|.+|...+|++|++. ++- -=.|+||...||++||+.++..+-
T Consensus 63 LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 63 LTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp BTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred ccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 9999999999999999863 111 126999999999999999988774
No 73
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.55 E-value=0.019 Score=56.08 Aligned_cols=46 Identities=15% Similarity=0.076 Sum_probs=36.3
Q ss_pred CCChhhHHHHHHHHHHHHH----cCC-------Cc--CEEEecCcHHHHHHHHHHHHhc
Q psy11843 167 PSSLNSVNEAEAAGVALAK----AGF-------KF--DVAHTSVLTRAQNTLKAILKGI 212 (325)
Q Consensus 167 ~Lt~~G~~qa~~~~~~l~~----~~~-------~~--~~i~sSpl~Ra~qTA~~i~~~~ 212 (325)
.||.+|.++-..+|+++++ .++ .. -.+|+++..||++||+.++..+
T Consensus 70 ~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 70 QLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYANSLQRTVATAQFFITGA 128 (413)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeCCchHHHHHHHHHHHhc
Confidence 4999999999989987764 211 11 2789999999999999987766
No 74
>KOG3720|consensus
Probab=96.53 E-value=0.0073 Score=58.97 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=39.0
Q ss_pred CCChhhHHHHHHHHHHHHH---cCCC-----cC----EEEecCcHHHHHHHHHHHHhcC
Q psy11843 167 PSSLNSVNEAEAAGVALAK---AGFK-----FD----VAHTSVLTRAQNTLKAILKGIG 213 (325)
Q Consensus 167 ~Lt~~G~~qa~~~~~~l~~---~~~~-----~~----~i~sSpl~Ra~qTA~~i~~~~~ 213 (325)
.||+.|++|+..+|++|++ .-.+ ++ .|.||+.-||+.||+-++..+-
T Consensus 70 qLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRtl~SAqs~laGlf 128 (411)
T KOG3720|consen 70 QLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRTLMSAQSVLAGLF 128 (411)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHHHHHHHHHHHhhC
Confidence 4999999999999999998 3111 11 7889999999999999987663
No 75
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=96.37 E-value=0.07 Score=52.30 Aligned_cols=47 Identities=19% Similarity=0.093 Sum_probs=36.8
Q ss_pred CCCChhhHHHHHHHHHHHHHc----CC-------CcC--EEEecCcHHHHHHHHHHHHhc
Q psy11843 166 YPSSLNSVNEAEAAGVALAKA----GF-------KFD--VAHTSVLTRAQNTLKAILKGI 212 (325)
Q Consensus 166 ~~Lt~~G~~qa~~~~~~l~~~----~~-------~~~--~i~sSpl~Ra~qTA~~i~~~~ 212 (325)
-.||.+|.+|...+|+++++. ++ ..+ .|++++..||+.||+.++..+
T Consensus 71 GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~Gl 130 (436)
T PRK10172 71 GWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGL 130 (436)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhc
Confidence 349999999999999988753 11 112 678888899999999887766
No 76
>KOG4609|consensus
Probab=93.07 E-value=0.31 Score=42.93 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=33.9
Q ss_pred EEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCc-cchHHHHHH
Q psy11843 6 IVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQC-DIKWAYILA 78 (325)
Q Consensus 6 ~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c-~~~~a~~~a 78 (325)
|+||||||- ...|..| -||+.|+.||.-.. .++.++ -..|+...- ++-+|-.||
T Consensus 97 I~LiRHgeY------~~~g~~~-hLTelGReQAE~tG--------kRL~el----glk~d~vv~StM~RA~ETa 151 (284)
T KOG4609|consen 97 IFLIRHGEY------HVDGSLE-HLTELGREQAELTG--------KRLAEL----GLKFDKVVASTMVRATETA 151 (284)
T ss_pred EEEEeccce------eccCchh-hcchhhHHHHHHHh--------HHHHHc----CCchhhhhhhhhhhhHHHH
Confidence 999999973 2345555 69999999986653 344331 133333322 267777777
No 77
>KOG1057|consensus
Probab=90.00 E-value=0.43 Score=49.19 Aligned_cols=45 Identities=22% Similarity=0.003 Sum_probs=38.0
Q ss_pred CChhhHHHHHHHHHHHHHcCC---------------CcCEEEecCcHHHHHHHHHHHHhc
Q psy11843 168 SSLNSVNEAEAAGVALAKAGF---------------KFDVAHTSVLTRAQNTLKAILKGI 212 (325)
Q Consensus 168 Lt~~G~~qa~~~~~~l~~~~~---------------~~~~i~sSpl~Ra~qTA~~i~~~~ 212 (325)
||..|+.||+++|+.|+..-. +==.||+|.-.|.+-||+.+++.+
T Consensus 512 lT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 512 LTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred ecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 999999999999999986311 012799999999999999999876
No 78
>KOG3734|consensus
Probab=89.08 E-value=0.99 Score=41.37 Aligned_cols=16 Identities=38% Similarity=0.380 Sum_probs=13.0
Q ss_pred ceEEEEEecCCCcccc
Q psy11843 3 KYVIVMVRHGESEWNQ 18 (325)
Q Consensus 3 ~~~~~~~rhg~t~~n~ 18 (325)
..++++|||||...|.
T Consensus 12 ~~~i~vmRHgERvD~i 27 (272)
T KOG3734|consen 12 PRNIFVMRHGERVDNI 27 (272)
T ss_pred CceEEEEEcccccccc
Confidence 4569999999998853
No 79
>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction
Probab=77.15 E-value=2.9 Score=34.80 Aligned_cols=61 Identities=11% Similarity=0.257 Sum_probs=36.0
Q ss_pred HHHHHHHHhhhccCCCChHHHHHhhcCCCccccCCCccchHHHHHHHHHHHHHHHHHHHHH
Q psy11843 33 KALCMIASVVIYPLGWESAKAQEICGPTASRYNLGQCDIKWAYILAIIGCLDVIVLAILAF 93 (325)
Q Consensus 33 ~G~~~a~~~~~~p~g~~~~~v~~~cg~~~~~~~~g~c~~~~a~~~a~~~~~~~~~~~~l~~ 93 (325)
+|.....++..|+...+.+.-...-.....+.+....+.||+|++|.++.++.++.++|..
T Consensus 111 ag~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwSf~la~~a~~~~l~a~~l~l 171 (172)
T PF13903_consen 111 AGLCILIALIVFVVSVNYEIEINFPQWPPDPPSPFSYSYGWSFWLAWVAFILLLLAGILFL 171 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccccCccCeeEEECHHHHHHHHHHHHHHHHHHHHh
Confidence 4555566666665433322111011111122334467799999999999999998888754
No 80
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=50.95 E-value=21 Score=32.68 Aligned_cols=37 Identities=11% Similarity=-0.033 Sum_probs=24.3
Q ss_pred CCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccC
Q psy11843 284 MFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKK 324 (325)
Q Consensus 284 ~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~ 324 (325)
.+.|+++..+++.+.++... .-...|++.+|||+|..
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~----~v~~dii~l~hGGPI~~ 226 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAAR----AVNPDIIVLCHGGPIAT 226 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHH----CC-TT-EEEEECTTB-S
T ss_pred ccCCHHHHHHHHHHHHHHHH----HhCCCeEEEEeCCCCCC
Confidence 47799999999999777632 22345899999999864
No 81
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=48.29 E-value=1.3e+02 Score=26.23 Aligned_cols=63 Identities=19% Similarity=0.037 Sum_probs=41.8
Q ss_pred CCCChhhHHH----HHHHHHHHHHcCCCcCEEEecCcHHHHHHHHHHHHhcCCCCCCccccccchhhcc
Q psy11843 166 YPSSLNSVNE----AEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHY 230 (325)
Q Consensus 166 ~~Lt~~G~~q----a~~~~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~i~~~~~L~E~~~ 230 (325)
.+-|+.++.+ ...+++.|.+.|+-.=.-+-||+...+|-|..+...-. .+.+.++..|.++--
T Consensus 70 LgFs~edR~eniRRvaevAkll~daG~iviva~ISP~r~~R~~aR~~~~~~~--FiEVyV~~pl~vce~ 136 (197)
T COG0529 70 LGFSREDRIENIRRVAEVAKLLADAGLIVIVAFISPYREDRQMARELLGEGE--FIEVYVDTPLEVCER 136 (197)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHCCeEEEEEeeCccHHHHHHHHHHhCcCc--eEEEEeCCCHHHHHh
Confidence 4456666643 33466778877766667788999999999998765422 255666655555443
No 82
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=46.44 E-value=37 Score=25.15 Aligned_cols=36 Identities=8% Similarity=-0.045 Sum_probs=23.4
Q ss_pred CCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccC
Q psy11843 284 MFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKK 324 (325)
Q Consensus 284 ~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~ 324 (325)
..+.+.++...+...... ...++.|+|-+++|.-|+
T Consensus 18 ~~~~~~~~~~~v~~~~~~-----~~~~~pvlVHC~~G~gRt 53 (105)
T smart00404 18 SPDSILEFLRAVKKNLNQ-----SSSSGPVVVHCSAGVGRT 53 (105)
T ss_pred CHHHHHHHHHHHHHHHHh-----cCCCCCEEEEeCCCCChh
Confidence 335566666665554332 123568999999999886
No 83
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=46.44 E-value=37 Score=25.15 Aligned_cols=36 Identities=8% Similarity=-0.045 Sum_probs=23.4
Q ss_pred CCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccC
Q psy11843 284 MFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKK 324 (325)
Q Consensus 284 ~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~ 324 (325)
..+.+.++...+...... ...++.|+|-+++|.-|+
T Consensus 18 ~~~~~~~~~~~v~~~~~~-----~~~~~pvlVHC~~G~gRt 53 (105)
T smart00012 18 SPDSILEFLRAVKKNLNQ-----SSSSGPVVVHCSAGVGRT 53 (105)
T ss_pred CHHHHHHHHHHHHHHHHh-----cCCCCCEEEEeCCCCChh
Confidence 335566666665554332 123568999999999886
No 84
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=42.86 E-value=34 Score=30.28 Aligned_cols=55 Identities=18% Similarity=0.117 Sum_probs=35.6
Q ss_pred EEEEEecCCCcccccCcEEEecCCccCHHHHHHHHHhhhccCCCChHHHHHhhcC-------CCccccCCCccchHHHHH
Q psy11843 5 VIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLGWESAKAQEICGP-------TASRYNLGQCDIKWAYIL 77 (325)
Q Consensus 5 ~~~~~rhg~t~~n~~~~~~G~~d~~L~~~G~~~a~~~~~~p~g~~~~~v~~~cg~-------~~~~~~~g~c~~~~a~~~ 77 (325)
..+++|||+=.- .+||..|+.|+..+. ..+++.... ....+..-..+..|...+
T Consensus 5 v~~~~RHg~r~p-----------~~LT~~G~~q~~~~G--------~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~S 65 (242)
T cd07061 5 VQVLSRHGDRYP-----------GELTPFGRQQAFELG--------RYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQS 65 (242)
T ss_pred EEEEEecCCCCc-----------hhhhHHHHHHHHHHH--------HHHHHHHHHhcccccCCCCeeEEEECCCcHHHHH
Confidence 478999997532 589999999998775 444433221 112333335558888887
Q ss_pred H
Q psy11843 78 A 78 (325)
Q Consensus 78 a 78 (325)
|
T Consensus 66 a 66 (242)
T cd07061 66 A 66 (242)
T ss_pred H
Confidence 7
No 85
>PF07062 Clc-like: Clc-like; InterPro: IPR010761 Clc proteins are a nine-member gene family of chloride channels that have diverse roles in the plasma membrane and in intracellular organelles, especially membrane excitability and the maintenance of osmotic balance [, ]. This family contains a number of Clc-like proteins that are approximately 250 residues long and their homologues. ; GO: 0016021 integral to membrane
Probab=39.38 E-value=41 Score=29.81 Aligned_cols=25 Identities=16% Similarity=0.414 Sum_probs=19.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Q psy11843 71 IKWAYILAIIGCLDVIVLAILAFIL 95 (325)
Q Consensus 71 ~~~a~~~a~~~~~~~~~~~~l~~i~ 95 (325)
+|||||+++.|+++.++.-+.+.+.
T Consensus 179 ~G~afYl~~~g~l~~~~a~l~sv~~ 203 (211)
T PF07062_consen 179 YGYAFYLHLAGSLLLLFAFLFSVFV 203 (211)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999776665555543
No 86
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=35.06 E-value=70 Score=25.47 Aligned_cols=36 Identities=3% Similarity=-0.009 Sum_probs=28.3
Q ss_pred CCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccC
Q psy11843 285 FESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKK 324 (325)
Q Consensus 285 gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~ 324 (325)
++...+....+.++++..+ ..++.|+|-|++|..|+
T Consensus 57 ~~~~~~~~~~~~~~i~~~~----~~~~~VlVHC~~G~~RS 92 (138)
T smart00195 57 ETKISPYFPEAVEFIEDAE----KKGGKVLVHCQAGVSRS 92 (138)
T ss_pred CCChHHHHHHHHHHHHHHh----cCCCeEEEECCCCCchH
Confidence 4556678888888888743 46788999999999885
No 87
>PF13422 DUF4110: Domain of unknown function (DUF4110)
Probab=31.03 E-value=73 Score=24.52 Aligned_cols=23 Identities=35% Similarity=0.561 Sum_probs=19.7
Q ss_pred CCCCCHHHHHHhHHHHHHHhhcc
Q psy11843 283 PMFESLKLTIERTLPYWNNVIVP 305 (325)
Q Consensus 283 p~gES~~~~~~Rv~~~l~~ii~~ 305 (325)
--|||+.+|+.|....|...+..
T Consensus 13 ~p~EsLr~Ff~RT~~~W~~~a~~ 35 (96)
T PF13422_consen 13 KPFESLRDFFARTSEYWQEWAIE 35 (96)
T ss_pred CCCCcHHHHHHHhHHHHHHHHHH
Confidence 35999999999999999986643
No 88
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=30.56 E-value=45 Score=28.70 Aligned_cols=31 Identities=16% Similarity=-0.001 Sum_probs=21.9
Q ss_pred CHHHHHHhHHHHHHHhhccccCCCCEEEEEecC
Q psy11843 287 SLKLTIERTLPYWNNVIVPQYSDETCYLATVTW 319 (325)
Q Consensus 287 S~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg 319 (325)
|.++|.+|+..|++.+- ..++...||+|+|-
T Consensus 72 ~~~~~~~~~~~fv~~iR--~~hP~tPIllv~~~ 102 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIR--EAHPDTPILLVSPI 102 (178)
T ss_dssp CTTTHHHHHHHHHHHHH--TT-SSS-EEEEE--
T ss_pred CHHHHHHHHHHHHHHHH--HhCCCCCEEEEecC
Confidence 44688999999999754 45678899999974
No 89
>PF03742 PetN: PetN ; InterPro: IPR005497 PetN is a small hydrophobic protein, crucial for cytochrome b6-f complex assembly and/or stability. It is found in bacteria and plants. Cytochrome b6-f complex is composed of 4 large subunits: cytochrome b6, subunit IV (17 kDa polypeptide, petD), cytochrome f and the Rieske protein, as well as 4 small subunits: petG, petL, petM and petN. The complex functions as a dimer. The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI) [].; GO: 0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity, 0017004 cytochrome complex assembly, 0009512 cytochrome b6f complex; PDB: 2ZT9_H 2D2C_H 2E76_H 1VF5_U 2E75_H 2E74_H.
Probab=28.05 E-value=93 Score=18.33 Aligned_cols=16 Identities=13% Similarity=0.387 Sum_probs=10.7
Q ss_pred cchHHHHHHHHHHHHH
Q psy11843 70 DIKWAYILAIIGCLDV 85 (325)
Q Consensus 70 ~~~~a~~~a~~~~~~~ 85 (325)
+++||..++++..-++
T Consensus 5 ~lgWaal~~~ftfSla 20 (29)
T PF03742_consen 5 SLGWAALMVVFTFSLA 20 (29)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhccce
Confidence 4899988775554443
No 90
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=25.76 E-value=46 Score=26.25 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=26.4
Q ss_pred CCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCccC
Q psy11843 285 FESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNKK 324 (325)
Q Consensus 285 gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir~ 324 (325)
.+...+...++..++++.. .++++|||-|++|..|+
T Consensus 52 ~~~~~~~~~~~~~~i~~~~----~~~~~VlVHC~~G~~RS 87 (133)
T PF00782_consen 52 EEPILEHLDQAVEFIENAI----SEGGKVLVHCKAGLSRS 87 (133)
T ss_dssp TSHGGGGHHHHHHHHHHHH----HTTSEEEEEESSSSSHH
T ss_pred CcchHHHHHHHHHhhhhhh----cccceeEEEeCCCcccc
Confidence 4445566677777777632 46788999999999885
No 91
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=25.51 E-value=1e+02 Score=27.85 Aligned_cols=34 Identities=9% Similarity=0.009 Sum_probs=25.1
Q ss_pred CCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCcc
Q psy11843 285 FESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKNK 323 (325)
Q Consensus 285 gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~ir 323 (325)
-+|++|..+|+.+.++. + .++++.++|||+++..
T Consensus 126 i~s~~eA~~~ive~~~~-~----~~~~~~VliaH~~~~G 159 (238)
T cd07397 126 VISLEESAQRIIAAAKK-A----PPDLPLILLAHNGPSG 159 (238)
T ss_pred CCCHHHHHHHHHHHhhh-c----CCCCCeEEEeCcCCcC
Confidence 56888888888887753 2 3456689999999854
No 92
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=24.84 E-value=1.4e+02 Score=23.53 Aligned_cols=31 Identities=19% Similarity=0.054 Sum_probs=23.6
Q ss_pred CCCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEe
Q psy11843 282 FPMFESLKLTIERTLPYWNNVIVPQYSDETCYLATV 317 (325)
Q Consensus 282 ~p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVs 317 (325)
+..+++.+++.+|+.+.+++ + .+++.|+|.|
T Consensus 35 ~~~~~~~~~~~~~l~~~i~~-~----~~~~~vivlt 65 (116)
T TIGR00824 35 FVPGENAETLQEKYNAALAD-L----DTEEEVLFLV 65 (116)
T ss_pred cCCCcCHHHHHHHHHHHHHh-c----CCCCCEEEEE
Confidence 45699999999999999887 3 2345577765
No 93
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=24.00 E-value=1.2e+02 Score=26.93 Aligned_cols=38 Identities=8% Similarity=-0.122 Sum_probs=26.5
Q ss_pred CCCCCHHHHHHhHHHHHHHhhccccCCCCEEEEEecCCCc
Q psy11843 283 PMFESLKLTIERTLPYWNNVIVPQYSDETCYLATVTWNKN 322 (325)
Q Consensus 283 p~gES~~~~~~Rv~~~l~~ii~~~~~~~~~vLvVsHg~~i 322 (325)
+.++...++.++..+.+++.+. ...+++++||||=.|.
T Consensus 139 ~~~~~~~~~~~~~l~~l~~~l~--~~~~~~~ivvtH~pP~ 176 (239)
T TIGR03729 139 KRPMSDPERTAIVLKQLKKQLN--QLDNKQVIFVTHFVPH 176 (239)
T ss_pred CCCCChHHHHHHHHHHHHHHHH--hcCCCCEEEEEcccch
Confidence 3456677788888888887552 2345679999997653
No 94
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=23.57 E-value=90 Score=25.10 Aligned_cols=19 Identities=16% Similarity=0.464 Sum_probs=9.4
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy11843 72 KWAYILAIIGCLDVIVLAI 90 (325)
Q Consensus 72 ~~a~~~a~~~~~~~~~~~~ 90 (325)
+|.+++.||.+++.+|+.+
T Consensus 1 RW~l~~iii~~i~l~~~~~ 19 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLF 19 (130)
T ss_pred CeeeHHHHHHHHHHHHHHH
Confidence 4666555444444444433
No 95
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=22.68 E-value=1.1e+02 Score=17.37 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q psy11843 78 AIIGCLDVIVLAILAFILATRH 99 (325)
Q Consensus 78 a~~~~~~~~~~~~l~~i~~~r~ 99 (325)
|+++++...+=+.+++|..+|+
T Consensus 4 a~Lkvla~~LP~lISWIK~kr~ 25 (26)
T PF01372_consen 4 AILKVLATGLPTLISWIKNKRQ 25 (26)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcChHHHHHHHHHhc
Confidence 5677777777788888887764
No 96
>KOG1382|consensus
Probab=21.26 E-value=1.7e+02 Score=29.04 Aligned_cols=47 Identities=11% Similarity=-0.043 Sum_probs=37.3
Q ss_pred CChhhHHHHHHHHHHHHHc-----CCCcCEEEecCcHHHHHHHHHHHHhcCC
Q psy11843 168 SSLNSVNEAEAAGVALAKA-----GFKFDVAHTSVLTRAQNTLKAILKGIGQ 214 (325)
Q Consensus 168 Lt~~G~~qa~~~~~~l~~~-----~~~~~~i~sSpl~Ra~qTA~~i~~~~~~ 214 (325)
|...|+..|.++++.|-.. +...=.|+++-..||.+||+.++..+..
T Consensus 133 l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLfg 184 (467)
T KOG1382|consen 133 LEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLFG 184 (467)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhcc
Confidence 7788888999988877642 2223378999999999999999988863
Done!