RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11843
(325 letters)
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET:
CIT; 2.70A {Homo sapiens} PDB: 1yjx_A*
Length = 262
Score = 198 bits (507), Expect = 1e-62
Identities = 73/142 (51%), Positives = 87/142 (61%), Gaps = 10/142 (7%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
EA+ G AL AG++FD+ TSV RA TL +L I Q LPV ++WRLNERHYGG
Sbjct: 35 HEEAKRGGQALRDAGYEFDICFTSVQKRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGG 94
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
LTGL+KA TAAK+GE Q V D DH +YSNI D RYA +++ P
Sbjct: 95 LTGLNKAETAAKHGEAQ-VKIWRRSYDVPPPPMEPDHPFYSNISKDRRYADLT-EDQLPS 152
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
ESLK TI R LP+WN IVPQ
Sbjct: 153 CESLKDTIARALPFWNEEIVPQ 174
Score = 74.9 bits (185), Expect = 8e-16
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
MA Y +V++RHGES WN +N F GWYDA LS
Sbjct: 1 MAAYKLVLIRHGESAWNLENRFSGWYDADLSPA 33
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A
{Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A*
2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A
Length = 267
Score = 198 bits (507), Expect = 1e-62
Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
+ EA G L F+FD+ TSVL R+ +T IL+ +GQE +PV SWRLNERHYG
Sbjct: 35 MEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGA 94
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYAS-EPSKEEFP 283
L GL++ A +GEEQ V + E H YY I +D RY + ++ P
Sbjct: 95 LIGLNREQMALNHGEEQ-VRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLP 153
Query: 284 MFESLKLTIERTLPYWNNVIVPQ 306
ESLK +ER LPYWN I P+
Sbjct: 154 RSESLKDVLERLLPYWNERIAPE 176
Score = 74.9 bits (185), Expect = 8e-16
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
M+KY ++M+RHGE WN++N FC W D +L+ +
Sbjct: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSE 33
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET:
3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1
PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A*
Length = 240
Score = 191 bits (489), Expect = 3e-60
Identities = 53/142 (37%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
EA AG L + DV +TS L+RA T L+ + +PV++SWRLNERHYG
Sbjct: 32 QQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGD 91
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L G DKA T K+GEE+ + D + D RY P
Sbjct: 92 LQGKDKAETLKKFGEEK-FNTYRRSFDVPPPPIDASSPFS--QKGDERYKYVD-PNVLPE 147
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
ESL L I+R LPYW +VI
Sbjct: 148 TESLALVIDRLLPYWQDVIAKD 169
Score = 67.9 bits (167), Expect = 2e-13
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+V+VRHG+SEWN+KNLF GW D +LS K
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAK 30
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat;
phosphoglyceromutase, decode, SBRI, niaid, UWPPG,
glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia
pseudomallei} PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A*
3lnt_A
Length = 257
Score = 191 bits (489), Expect = 5e-60
Identities = 67/142 (47%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
EA AG L +AG+ FD+A+TSVL RA TL + + +PV SWRLNERHYG
Sbjct: 41 NREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVPVVHSWRLNERHYGA 100
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI--GLE-DHAYYSNIVDDPRYASEPSKEEFPM 284
L+GL+KA TAAKYG+EQ V DT LE DPRYA P +E+ P+
Sbjct: 101 LSGLNKAETAAKYGDEQ-VLVWRRSYDTPPPALEPGDERA--PYADPRYAKVP-REQLPL 156
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
E LK T+ R LP WN I P
Sbjct: 157 TECLKDTVARVLPLWNESIAPA 178
Score = 69.1 bits (170), Expect = 9e-14
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
M K +V++RHGES WN++N F GW D L+E+
Sbjct: 9 MYK--LVLIRHGESTWNKENRFTGWVDVDLTEQ 39
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural
genomics, medical STRU genomics of pathogenic protozoa,
MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A
Length = 258
Score = 191 bits (487), Expect = 1e-59
Identities = 60/142 (42%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
EA AAG L + FKFDV +TSVL RA T +LK +PV K+WRLNERH G
Sbjct: 43 EEEAIAAGKYLKEKNFKFDVVYTSVLKRAICTAWNVLKTADLLHVPVVKTWRLNERHCGS 102
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L GL+K+ TA KYGEEQ V D ++ + + Y + P K+ P
Sbjct: 103 LQGLNKSETAKKYGEEQ-VKIWRRSYDIPPPKLDKEDNRW--PGHNVVYKNVP-KDALPF 158
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
E LK T+ER LP+W + I P
Sbjct: 159 TECLKDTVERVLPFWFDHIAPD 180
Score = 72.9 bits (180), Expect = 4e-15
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
M Y +V++RHGES WN++N F GW D LSEK
Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEK 41
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria,
glycolysis, I structural genomics consortium, SGC; 2.01A
{Cryptosporidium parvum}
Length = 267
Score = 191 bits (488), Expect = 1e-59
Identities = 57/142 (40%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
V+EA AG L + GFKFDV +TSVL RA T +LK +G + P+ WRLNERHYG
Sbjct: 52 VSEAIEAGRMLLEKGFKFDVVYTSVLKRAIMTTWTVLKELGNINCPIINHWRLNERHYGA 111
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L GL+K+ TA+K+GE+Q V D + + ++ Y P
Sbjct: 112 LQGLNKSETASKFGEDQ-VKIWRRSFDVPPPVLEKSDPRWP--GNELIYKGIC-PSCLPT 167
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
E LK T+ER PY+ +VI P
Sbjct: 168 TECLKDTVERVKPYFEDVIAPS 189
Score = 73.0 bits (180), Expect = 4e-15
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+ Y + ++RHGESEWN++N F GW D LSE+
Sbjct: 18 GSTYKLTLIRHGESEWNKENRFTGWTDVSLSEQ 50
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and
gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia
coli} SCOP: c.60.1.1 PDB: 1e59_A*
Length = 249
Score = 190 bits (486), Expect = 1e-59
Identities = 69/142 (48%), Positives = 89/142 (62%), Gaps = 12/142 (8%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
V+EA+AAG L + G+ FD A+TSVL RA +TL +L + Q LPV KSW+LNERHYG
Sbjct: 34 VSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGA 93
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L GL+KA TA KYG+EQ V + +D Y DPRYA ++E P+
Sbjct: 94 LQGLNKAETAEKYGDEQ-VKQWRRGFAVTPPELTKDDERYP--GHDPRYAKLS-EKELPL 149
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
ESL LTI+R +PYWN I+P+
Sbjct: 150 TESLALTIDRVIPYWNETILPR 171
Score = 69.8 bits (172), Expect = 5e-14
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 2 AKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
A +V+VRHGES+WN++N F GWYD LSEK
Sbjct: 1 AVTKLVLVRHGESQWNKENRFTGWYDVDLSEK 32
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural
genomics, niaid, national institute of allergy AN
infectious diseases; 2.30A {Borrelia burgdorferi}
Length = 274
Score = 191 bits (487), Expect = 1e-59
Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 12/142 (8%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
++EA AG+ L + G+ FD+A +S+L+RA +TL IL+ +GQ + V K+WRLNERHYG
Sbjct: 59 IDEAVEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQSYISVKKTWRLNERHYGA 118
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L GL+K+ TAAKYGE++ V D E + + DPRY P K E P
Sbjct: 119 LQGLNKSETAAKYGEDK-VLIWRRSYDVPPMSLDESDDRH--PIKDPRYKHIP-KRELPS 174
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
E LK T+ R +PYW + I +
Sbjct: 175 TECLKDTVARVIPYWTDEIAKE 196
Score = 69.1 bits (170), Expect = 1e-13
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 2/33 (6%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
M K +V+VRHGESEWN++NLF GW D +LS+K
Sbjct: 27 MYK--LVLVRHGESEWNKENLFTGWTDVKLSDK 57
>4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural
genomics, niaid, national institute of allergy AN
infectious diseases; 2.45A {Mycobacterium leprae}
Length = 268
Score = 188 bits (479), Expect = 2e-58
Identities = 55/142 (38%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
EA +G LA+ DV +TS+L RA T L +PV +SWRLNERHYG
Sbjct: 59 RAEAVRSGELLAEHNLLPDVLYTSLLRRAITTAHLALDTADWLWIPVRRSWRLNERHYGA 118
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L GLDKA T A+YGEE+ DT + + DPRY P+
Sbjct: 119 LQGLDKAVTKARYGEER-FMAWRRSYDTPPPPIEKGSEFS--QDADPRYTDIG---GGPL 172
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
E L + R LPY+ +VIVP
Sbjct: 173 TECLADVVTRFLPYFTDVIVPD 194
Score = 71.5 bits (176), Expect = 1e-14
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
++++RHGES+WN +NLF GW D L++K
Sbjct: 25 GNTATLILLRHGESDWNARNLFTGWVDVGLTDK 57
>1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyerate
mutase, SH3 domain binding, structural genom TBSGC;
1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1
Length = 265
Score = 187 bits (478), Expect = 3e-58
Identities = 55/142 (38%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
EA +G +A+ DV +TS+L RA T L + +PV +SWRLNERHYG
Sbjct: 36 QAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGA 95
Query: 233 LTGLDKAATAAKYGEEQRVHR-----DTI---GLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L GLDKA T A+YGEEQ DT + DPRYA P+
Sbjct: 96 LQGLDKAETKARYGEEQ-FMAWRRSYDTPPPPIERGSQFS--QDADPRYADIG---GGPL 149
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
E L + R LPY+ +VIV
Sbjct: 150 TECLADVVARFLPYFTDVIVGD 171
Score = 71.8 bits (177), Expect = 1e-14
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+V++RHGES+WN NLF GW D L++K
Sbjct: 2 ANTGSLVLLRHGESDWNALNLFTGWVDVGLTDK 34
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR
{Schizosaccharomyces pombe} SCOP: c.60.1.1
Length = 211
Score = 169 bits (432), Expect = 5e-52
Identities = 54/136 (39%), Positives = 69/136 (50%), Gaps = 25/136 (18%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
+ EA+ G L G+KFD+A TS L RAQ T + IL+ +G+ +L KS +LNER+YG
Sbjct: 39 IKEAKLGGERLKSRGYKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGD 98
Query: 233 LTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPR--YASEPSKEEFPMFESLKL 290
L GL+K K+G EQ V R Y P P ESLK
Sbjct: 99 LQGLNKDDARKKWGAEQ-VQIW-----------------RRSYDIAP-----PNGESLKD 135
Query: 291 TIERTLPYWNNVIVPQ 306
T ER LPY+ + IVP
Sbjct: 136 TAERVLPYYKSTIVPH 151
Score = 71.7 bits (177), Expect = 4e-15
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
A ++V+ RHGESEWN+ NLF GW D LSE
Sbjct: 5 AAPNLLVLTRHGESEWNKLNLFTGWKDPALSET 37
>3r7a_A Phosphoglycerate mutase, putative; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG;
HET: MSE EPE; 1.84A {Bacillus anthracis}
Length = 237
Score = 140 bits (354), Expect = 3e-40
Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 9/136 (6%)
Query: 171 NSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHY 230
V A G L F A++S RA T +LK Q L + + +L E ++
Sbjct: 43 KGVEVATNLGTGLK--DIHFMNAYSSDSGRAIETANLVLKYSEQSKLKLEQRKKLRELNF 100
Query: 231 GGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKL 290
G G G+ V E + V D A++P E +L
Sbjct: 101 GIFEGEKLDNMWDAVGKAAGVTSPE---ELLKFSIQEVIDLIRAADP----TKQAEDWEL 153
Query: 291 TIERTLPYWNNVIVPQ 306
R + +
Sbjct: 154 FSTRIKAEIDKISEEA 169
Score = 57.7 bits (140), Expect = 7e-10
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+ + + RHG++ N + GW D+ L EK
Sbjct: 13 VVT--LYVTRHGKTILNTNHRAQGWADSPLVEK 43
>3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced
glycolysis and apoptosis regulator, CAsp target,
structural genomics medical relevance; HET: MSE; 1.75A
{Homo sapiens}
Length = 275
Score = 139 bits (352), Expect = 1e-39
Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 15/150 (10%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQE-DLPVHKSWRLNERHYG 231
+A AAG+ L KF A +S L R + T+ IL+ D+ V RL ER YG
Sbjct: 41 FKQAAAAGIFLN--NVKFTHAFSSDLMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYG 98
Query: 232 GLTGLDKA--ATAAKYGEEQRVHRDTIGLED--------HAYYSNIVDDPRYASEPSK-- 279
+ G + AK E+ G E ++ + ++ +
Sbjct: 99 VVEGKALSELRAMAKAAREECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQF 158
Query: 280 EEFPMFESLKLTIERTLPYWNNVIVPQYSD 309
+ L+ ++ P N SD
Sbjct: 159 SQGSPSNCLETSLAEIFPLGKNHSSKVNSD 188
Score = 64.4 bits (157), Expect = 4e-12
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGW-YDAQLSEK 33
A++ + +VRHGE+ +N++ + G D LSE
Sbjct: 6 SARFALTVVRHGETRFNKEKIIQGQGVDEPLSET 39
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote
structure initiative; 1.75A {Saccharomyces cerevisiae}
PDB: 3lg2_A 3oi7_A* 3ll4_A*
Length = 265
Score = 109 bits (273), Expect = 4e-28
Identities = 21/142 (14%), Positives = 40/142 (28%), Gaps = 24/142 (16%)
Query: 173 VNEAEAAGVALAKAG-----FKFDVAHTSVLTRAQNTLKAILKGIGQED---LPVHKSWR 224
+ G ++ + TS RA+ T+ +LK + E + V
Sbjct: 37 EGQMLRTGESVFRNNQFLNPDNITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDDD 96
Query: 225 LNERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPM 284
L E YG G+ GL+ + + + E
Sbjct: 97 LREWEYGDYEGMLTREIIELRKSR--------GLDKERPW-----NIWRDGCENGET--- 140
Query: 285 FESLKLTIERTLPYWNNVIVPQ 306
+ + L + R + N+
Sbjct: 141 TQQIGLRLSRAIARIQNLHRKH 162
Score = 54.3 bits (131), Expect = 9e-09
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEK 33
++VRHG++EW++ + G D L+
Sbjct: 8 CIIVRHGQTEWSKSGQYTGLTDLPLTPY 35
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1,
signaling protein, low PH, alternative splicing,
cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus}
PDB: 2ikq_A 2h0q_A
Length = 264
Score = 86.2 bits (213), Expect = 8e-20
Identities = 26/142 (18%), Positives = 39/142 (27%), Gaps = 15/142 (10%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
+A G AL ++ D + S R T ILKG+ Q+ ++
Sbjct: 63 CMQARLVGEALLESNTVIDHVYCSPSLRCVQTAHNILKGLQQD-----NHLKIRVEP--- 114
Query: 233 LTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTI 292
GL + A S D Y + + ES I
Sbjct: 115 --GLFE--WTKWVAGSTLPAWIPPSELAAANLSV---DTTYRPHIPVSKLAISESYDTYI 167
Query: 293 ERTLPYWNNVIVPQYSDETCYL 314
R+ +I S L
Sbjct: 168 NRSFQVTKEIISECKSKGNNIL 189
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio}
PDB: 3e9d_A 3e9e_A
Length = 265
Score = 84.5 bits (209), Expect = 3e-19
Identities = 25/134 (18%), Positives = 36/134 (26%), Gaps = 28/134 (20%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKG-IGQEDLPVHKSWRLNERHYG 231
+A AAG L F S L RA T + IL + + L ER +G
Sbjct: 36 HQQAAAAGRYLK--DLHFTNVFVSNLQRAIQTAEIILGNNLHSSATEMILDPLLRERGFG 93
Query: 232 GLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLT 291
G K + RD P E+L+
Sbjct: 94 VAEGRPKEHLKNMANAAGQSCRDYT-------------------------PPGGETLEQV 128
Query: 292 IERTLPYWNNVIVP 305
R + ++
Sbjct: 129 KTRFKMFLKSLFQR 142
Score = 53.3 bits (128), Expect = 2e-08
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGW-YDAQLSEK 33
M + + +VRHGE+++N+ L G D LS+
Sbjct: 1 MLTFALTIVRHGETQYNRDKLLQGQGIDTPLSDT 34
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM
homolog; 1.69A {Bacillus stearothermophilus} SCOP:
c.60.1.1 PDB: 1h2f_A* 1ebb_A
Length = 207
Score = 65.7 bits (161), Expect = 7e-13
Identities = 26/146 (17%), Positives = 40/146 (27%), Gaps = 29/146 (19%)
Query: 168 SSLN--SVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRL 225
S L +A G L + +TS RA T + + G +P+++ RL
Sbjct: 26 SPLTEKGRQDAMRLGKRLE--AVELAAIYTSTSGRALETAEIVRGGRL---IPIYQDERL 80
Query: 226 NERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMF 285
E H G G + P
Sbjct: 81 REIHLGDWEGKTHDEIRQMDPIAFD---------------------HFWQAPHLYAPQRG 119
Query: 286 ESLKLTIERTLPYWNNVIVPQYSDET 311
E +R L + IV ++ ET
Sbjct: 120 ERFCDVQQRALEAVQS-IVDRHEGET 144
Score = 46.8 bits (112), Expect = 2e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+ + RHGE++WN + GW D+ L+EK
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSPLTEK 31
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate
mutase, structural genomics, PSI, structure initiative;
2.20A {Mycobacterium tuberculosis}
Length = 208
Score = 64.9 bits (159), Expect = 1e-12
Identities = 20/137 (14%), Positives = 30/137 (21%), Gaps = 34/137 (24%)
Query: 175 EAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLT 234
+AE AG L + + S R +T K + + L E YG
Sbjct: 44 QAELAGQLLGELELDDPIVICSPRRRTLDTAKLAGLTVNEVT------GLLAEWDYGSYE 97
Query: 235 GLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIER 294
GL + P ES+ +R
Sbjct: 98 GLTTPQIRESEPDWLVWTHG---------------------------CPAGESVAQVNDR 130
Query: 295 TLPYWNNVIVPQYSDET 311
+ S
Sbjct: 131 ADSAVAL-ALEHMSSRD 146
Score = 46.1 bits (110), Expect = 4e-06
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEK 33
++++RHGE+ W+ G + +L++
Sbjct: 13 LLLLRHGETAWSTLGRHTGGTEVELTDT 40
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 61.2 bits (148), Expect = 2e-10
Identities = 58/316 (18%), Positives = 99/316 (31%), Gaps = 99/316 (31%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEKALCMIASVVIYPLG-WES--------- 50
+A YV+ G + ++ G + + ++ +V I WES
Sbjct: 246 LAHYVVTAKLLGFTPGELRSYLKG-----ATGHSQGLVTAVAIAETDSWESFFVSVRKAI 300
Query: 51 -------AKAQEICGPTASRYNLGQCDIKW-----AYILAIIGCLDVIVLAILAFILATR 98
+ E T+ ++ + ++ + +L+I + ++ T
Sbjct: 301 TVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQE---QVQDYVNKTN 357
Query: 99 ---------HIKLQPEPLYGEINNAYGDNNSVAGSRKSL-----NLHPVMLMPQGVHEQD 144
I L +N A N V+G +SL L P G+ +Q
Sbjct: 358 SHLPAGKQVEISL--------VNGA--KNLVVSGPPQSLYGLNLTLRKAK-APSGL-DQS 405
Query: 145 R--FSE----FSNR----TANSKSSRYARPEYPSS-LNSVNE-----AEAAGVALAKAGF 188
R FSE FSNR + P + S L ++ V+
Sbjct: 406 RIPFSERKLKFSNRFLPVAS---------P-FHSHLLVPASDLINKDLVKNNVSFNAKDI 455
Query: 189 KFDVAHT---SVLTRAQNTL-KAILKGIGQEDLPVHKSW----RLNERHY-----GGLTG 235
+ V T S L ++ + I+ I + PV W + H GG +G
Sbjct: 456 QIPVYDTFDGSDLRVLSGSISERIVDCIIRL--PVK--WETTTQFKATHILDFGPGGASG 511
Query: 236 LDKAATAAKYGEEQRV 251
L K G RV
Sbjct: 512 LGVLTHRNKDGTGVRV 527
Score = 30.0 bits (67), Expect = 1.2
Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 39/126 (30%)
Query: 165 EYPSSLNSVNEA---EAA-------GVALAKAGFKFDVAHTS-----------VLTRAQN 203
EY ++L S+ + E+ G+ + A + ++ ++ + +Q
Sbjct: 1766 EY-AALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQE 1824
Query: 204 TLKAILKGIGQEDLPVHKSWRL-----NERH--Y---GGLTGLDKAATAAKYGEEQRVHR 253
L+ +++ +G+ W + N + Y G L LD + + Q++
Sbjct: 1825 ALQYVVERVGKR-----TGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKI-- 1877
Query: 254 DTIGLE 259
D I L+
Sbjct: 1878 DIIELQ 1883
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3
(6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...;
bifunctional enzyme, EDTA complex; HET: F6P EDT ADP;
2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B*
3qpu_A* 3qpv_A* 3qpw_A*
Length = 520
Score = 58.2 bits (140), Expect = 1e-09
Identities = 29/137 (21%), Positives = 41/137 (29%), Gaps = 30/137 (21%)
Query: 168 SSLNS--VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRL 225
S L+S A A + + K TS L T +A+ LP + L
Sbjct: 269 SGLSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEAL-------RLPYEQWKAL 321
Query: 226 NERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMF 285
NE G L Y EE Y+ D Y P+
Sbjct: 322 NEIDAGVCEELTYEEIRDTYPEE---------------YALREQDKYYYRYPTG------ 360
Query: 286 ESLKLTIERTLPYWNNV 302
ES + ++R P +
Sbjct: 361 ESYQDLVQRLEPVIMEL 377
Score = 37.8 bits (87), Expect = 0.004
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+ I + RHGE+E N + G D+ LS +
Sbjct: 244 VQPRTIYLCRHGENEHNLQGRIGG--DSGLSSR 274
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics
initiative, RSGI, structural genomics,; 1.40A {Thermus
thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A
2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A
2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A
2enw_A ...
Length = 177
Score = 54.9 bits (133), Expect = 2e-09
Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 10/81 (12%)
Query: 170 LNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERH 229
L + EA+A + A +S L RA+ T + L E H
Sbjct: 27 LTAEGEAQARRLK---GALPSLPAFSSDLLRARRTAELA-------GFSPRLYPELREIH 76
Query: 230 YGGLTGLDKAATAAKYGEEQR 250
+G L G +Y E
Sbjct: 77 FGALEGALWETLDPRYKEALL 97
Score = 45.7 bits (109), Expect = 3e-06
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+ +VRHGE+ WN++ GW D L+ +
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAE 30
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase
(phospho), phosphatase, hydrolase (phosp glycolysis,
bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus}
SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A*
1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Length = 469
Score = 55.8 bits (134), Expect = 6e-09
Identities = 19/137 (13%), Positives = 37/137 (27%), Gaps = 30/137 (21%)
Query: 168 SSLNS--VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRL 225
L+ ++ ++ K TS + R T +A+ +P + L
Sbjct: 272 PGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTIQTAEAL-------SVPYEQFKVL 324
Query: 226 NERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMF 285
NE G + Y E + + +P
Sbjct: 325 NEIDAGVCEEMTYEEIQDHYPLEFA---------------------LRDQDKYRYRYPKG 363
Query: 286 ESLKLTIERTLPYWNNV 302
ES + ++R P +
Sbjct: 364 ESYEDLVQRLEPVIMEL 380
Score = 34.2 bits (78), Expect = 0.058
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+ I + RHGESE N K G D LS +
Sbjct: 247 VTPRSIYLCRHGESELNLKGRIGG--DPGLSPR 277
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2,
NYSGXRC, structural genomics, protein structure
initiative; 2.80A {Vibrio parahaemolyticus}
Length = 213
Score = 53.8 bits (130), Expect = 9e-09
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 177 EAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGL 236
+ +A G+ +S L+R + + + + LP+ L E +G G+
Sbjct: 36 QQIAMAWKTKGYDVAGIISSPLSRCHDLAQILAEQQL---LPMTTEDDLQEMDFGDFDGM 92
Query: 237 DKAATAAKYGEEQRVHRD 254
+ + +
Sbjct: 93 PFDLLTEHWKKLDAFWQS 110
Score = 38.0 bits (89), Expect = 0.002
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 1 MAKYVIVMVRHGESEWNQKNLFCGWYDAQLSEK 33
+ I ++RHG+ + G D ++ E
Sbjct: 3 LKTLNIYLMRHGKVDAAPG--LHGQTDLKVKEA 33
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM,
hydrolase; 1.76A {Bombyx mori}
Length = 263
Score = 54.3 bits (130), Expect = 1e-08
Identities = 20/132 (15%), Positives = 36/132 (27%), Gaps = 20/132 (15%)
Query: 173 VNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQE-DLPVHKSWRLNERHYG 231
+A+ G + AG + S R T + L G+ + + + L E
Sbjct: 65 WFQAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGLFEFKNW 124
Query: 232 GLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMFESLKLT 291
+ T E N+ D Y +P E E++
Sbjct: 125 HMPKGIDFMTPI---------------ELCKAGLNV--DMTY--KPYVEMDASAETMDEF 165
Query: 292 IERTLPYWNNVI 303
+R +
Sbjct: 166 FKRGEVAMQAAV 177
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase;
1.95A {Mus musculus} PDB: 3d6a_A 3db1_A
Length = 273
Score = 50.9 bits (121), Expect = 1e-07
Identities = 27/149 (18%), Positives = 42/149 (28%), Gaps = 17/149 (11%)
Query: 167 PSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQE-DLPVHKSWRL 225
P S + +A AG AL +G + S R T K IL+ + E L + +
Sbjct: 66 PLSSCGIFQARLAGEALLDSGVRVTAVFASPALRCVQTAKHILEELKLEKKLKIRVEPGI 125
Query: 226 NERHYGGLTGLDKAATAAKYGEEQRVHRDTIGLEDHAYYSNIVDDPRYASEPSKEEFPMF 285
+ T E + + + D Y +
Sbjct: 126 --FEWMKWEASKATLTFLTLEELKEANFN--------------VDLDYRPALPRCSLMPA 169
Query: 286 ESLKLTIERTLPYWNNVIVPQYSDETCYL 314
ES +ER +I D L
Sbjct: 170 ESYDQYVERCAVSMGQIINTCPQDMGITL 198
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate
mutase family member 5, BXLBV68, MGC protein, structural
genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo
sapiens} PDB: 3o0t_A
Length = 202
Score = 49.0 bits (117), Expect = 3e-07
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 176 AEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYG 231
AE G+ LA G KF+ S +TRA T I + + + + L E
Sbjct: 41 AELTGLRLASLGLKFNKIVHSSMTRAIETTDIISRHLP--GVCKVSTDLLREGAPI 94
Score = 28.6 bits (64), Expect = 2.2
Identities = 5/28 (17%), Positives = 10/28 (35%), Gaps = 4/28 (14%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEK 33
I ++RH + + D L+
Sbjct: 13 IFLIRHSQYHVDGS----LEKDRTLTPL 36
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural
genomics, isomerase, structural GE consortium, SGC;
2.40A {Plasmodium falciparum}
Length = 214
Score = 46.7 bits (111), Expect = 3e-06
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 176 AEAAGVALAK--AGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGL 233
A+ G L K V + S + RA+ T I K D + LNE
Sbjct: 53 ADITGKKLKDILNNKKVSVIYHSDMIRAKETANIISKYFP--DANLINDPNLNEGTPYLP 110
Query: 234 TGLDKAA 240
L + +
Sbjct: 111 DPLPRHS 117
Score = 34.7 bits (80), Expect = 0.024
Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 6 IVMVRHGESEWNQKNLFCGWYDAQLSEK 33
I++VRHG+ E K+ +L+++
Sbjct: 24 IILVRHGQYERRYKD---DENSKRLTKE 48
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU
proteolysis, structural genomics, PSI protein structure
initiative; 1.80A {Agrobacterium tumefaciens str}
Length = 219
Score = 39.1 bits (91), Expect = 8e-04
Identities = 9/67 (13%), Positives = 18/67 (26%), Gaps = 3/67 (4%)
Query: 170 LNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERH 229
L+ A + +S T+A T + + G + ++E
Sbjct: 45 LSERGAERAREASRLPWAKALRRIVSSAETKAIETAHMLAETSG---AAIEIIEAMHEND 101
Query: 230 YGGLTGL 236
L
Sbjct: 102 RSATGFL 108
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha
sandwich, structural genomics, PSI-2, prote structure
initiative; 2.35A {Agrobacterium tumefaciens str}
Length = 173
Score = 36.2 bits (84), Expect = 0.006
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 174 NEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQE 215
EAE A ++ D+ +S R + T +A + +
Sbjct: 39 AEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEG 80
>1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase;
1.90A {Escherichia coli} PDB: 1ujb_A
Length = 161
Score = 34.2 bits (79), Expect = 0.024
Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Query: 174 NEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGG 232
+E+ L + + S RA+ TL+ + + L E G
Sbjct: 29 DESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEV----LPELTPCG 83
>3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2,
protein STRU initiative, northeast structural genomics
consortium, NESG, function; 2.00A {Nostoc SP}
Length = 172
Score = 33.8 bits (78), Expect = 0.035
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 175 EAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVH 220
+ E L K G +FD+ TS L RA+ T + +L L
Sbjct: 32 KTEKVAYRLVKLGRQFDLIVTSPLIRARQTAEILLASGLSCQLEES 77
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex,
amido hydrola 9244B, structural genomics, PSI-2; HET:
KCX; 2.62A {Agrobacterium tumefaciens}
Length = 417
Score = 27.0 bits (59), Expect = 8.8
Identities = 13/91 (14%), Positives = 22/91 (24%)
Query: 167 PSSLNSVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLN 226
SS+ + A G + D+ H + AI +G+ +
Sbjct: 238 GSSIMEDEDLFNLAERCAGEGIRLDIGHGGASFSFKVAEAAIARGLLPFSISTDLHGHSM 297
Query: 227 ERHYGGLTGLDKAATAAKYGEEQRVHRDTIG 257
L + E V T
Sbjct: 298 NFPVWDLATTMSKLLSVDMPFENVVEAVTRN 328
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.132 0.401
Gapped
Lambda K H
0.267 0.0787 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,907,063
Number of extensions: 285656
Number of successful extensions: 550
Number of sequences better than 10.0: 1
Number of HSP's gapped: 516
Number of HSP's successfully gapped: 59
Length of query: 325
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 231
Effective length of database: 4,077,219
Effective search space: 941837589
Effective search space used: 941837589
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (25.6 bits)