BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11844
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YFK|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YFK|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|C Chain C, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|D Chain D, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|E Chain E, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|F Chain F, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|G Chain G, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|H Chain H, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|I Chain I, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|J Chain J, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|K Chain K, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|L Chain L, Crystal Structure Of Human B Type Phosphoglycerate Mutase
Length = 262
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 92/110 (83%)
Query: 129 QIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDE 188
+ ++ P ESLK TI R LP+WN IVPQ+KEGK++LIAAHGNSLRGIVKHL+ +S+E
Sbjct: 144 DLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKRVLIAAHGNSLRGIVKHLEGLSEE 203
Query: 189 AIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKAN 238
AIM LNLPTGIP VYELD+NLKP+ M+FLGDEETV+KAMEAVA QGKA
Sbjct: 204 AIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVRKAMEAVAAQGKAK 253
>pdb|1XQ9|A Chain A, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
pdb|1XQ9|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
Length = 258
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 129 QIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDE 188
+ + P E LK T+ER LP+W + I P + KK+++AAHGNSLRG+VKHLDN+S+
Sbjct: 150 NVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHLDNLSEA 209
Query: 189 AIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
++ LN+PTG+P VYELDENLKP+ +L D E +KK M+ VANQGKA
Sbjct: 210 DVLELNIPTGVPLVYELDENLKPIKHY-YLLDSEELKKKMDEVANQGKA 257
>pdb|1E58|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Length = 249
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Query: 129 QIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDE 188
++ +E P+ ESL LTI+R +PYWN I+P++K G++++IAAHGNSLR +VK+LDNMS+E
Sbjct: 141 KLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEE 200
Query: 189 AIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
I+ LN+PTG+P VYE DEN KP+ +LG+ + + AVANQGKA
Sbjct: 201 EILELNIPTGVPLVYEFDENFKPLKRY-YLGNADEIAAKAAAVANQGKA 248
>pdb|1E59|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Complexed With Vanadate
Length = 249
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Query: 129 QIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDE 188
++ +E P+ ESL LTI+R +PYWN I+P++K G++++IAAHGNSLR +VK+LDNMS+E
Sbjct: 141 KLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEE 200
Query: 189 AIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
I+ LN+PTG+P VYE DEN KP+ +LG+ + + AVANQGKA
Sbjct: 201 EILELNIPTGVPLVYEFDENFKPLKRY-YLGNADEIAAKAAAVANQGKA 248
>pdb|3KKK|A Chain A, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|B Chain B, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|C Chain C, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|D Chain D, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
Length = 258
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 129 QIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDE 188
+ + P E LK T+ER LP+W + I P + KK+++AAHGNSLRG+VKHLDN+S+
Sbjct: 150 NVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHLDNLSEA 209
Query: 189 AIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
++ LN+PTG+P VYELDENLKP+ +L D E +KK M+ VANQGKA
Sbjct: 210 DVLELNIPTGVPLVYELDENLKPIKHY-YLLDSEELKKKMDEVANQGKA 257
>pdb|4EMB|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|B Chain B, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|C Chain C, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|D Chain D, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
Length = 274
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Query: 127 WLQIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMS 186
+ I E P E LK T+ R +PYW + I ++ EGKK+++AAHGNSLR +VK+ DN+S
Sbjct: 164 YKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKYFDNLS 223
Query: 187 DEAIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGK 236
+E ++ LN+PTGIP VYELD++L P+ +LGDE +KKA E+VA+QGK
Sbjct: 224 EEDVLKLNIPTGIPLVYELDKDLNPIKHY-YLGDESKIKKAXESVASQGK 272
>pdb|1T8P|A Chain A, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|1T8P|B Chain B, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|2A9J|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2A9J|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2F90|A Chain A, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2F90|B Chain B, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2H4X|A Chain A, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4X|B Chain B, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4Z|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H4Z|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H52|A Chain A, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|2H52|B Chain B, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|3NFY|A Chain A, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
pdb|3NFY|B Chain B, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
Length = 267
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 76/104 (73%)
Query: 133 EEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMG 192
++ P ESLK +ER LPYWN I P++ GK ILI+AHGNS R ++KHL+ +SDE I+
Sbjct: 150 DQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIIN 209
Query: 193 LNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGK 236
+ LPTG+P + ELDENL+ V +FLGD+E ++ A++ V +QGK
Sbjct: 210 ITLPTGVPILLELDENLRAVGPHQFLGDQEAIQAAIKKVEDQGK 253
>pdb|2HHJ|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate (15 Days)
pdb|2HHJ|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate (15 Days)
Length = 267
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 76/104 (73%)
Query: 133 EEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMG 192
++ P ESLK +ER LPYWN I P++ GK ILI+AHGNS R ++KHL+ +SDE I+
Sbjct: 150 DQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIIN 209
Query: 193 LNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGK 236
+ LPTG+P + ELDENL+ V +FLGD+E ++ A++ V +QGK
Sbjct: 210 ITLPTGVPILLELDENLRAVGPHQFLGDQEAIQAAIKKVEDQGK 253
>pdb|3FDZ|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
Length = 257
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 122 YMVAAWLQIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKH 181
Y + ++ E+ P+ E LK T+ R LP WN I P +K GK++LIAAHGNSLR ++K+
Sbjct: 141 YADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAHGNSLRALIKY 200
Query: 182 LDNMSDEAIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
LD +SD I+GLN+P G+P VYELDE+L P+ +LGD+E + KA AVA QGK+
Sbjct: 201 LDGISDADIVGLNIPNGVPLVYELDESLTPIRHY-YLGDQEAIAKAQAAVAQQGKS 255
>pdb|3EZN|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3EZN|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3FDZ|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
pdb|3GP3|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|C Chain C, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|D Chain D, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP5|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GP5|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GW8|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
pdb|3GW8|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
Length = 257
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 122 YMVAAWLQIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKH 181
Y + ++ E+ P+ E LK T+ R LP WN I P +K GK++LIAAHGNSLR ++K+
Sbjct: 141 YADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAHGNSLRALIKY 200
Query: 182 LDNMSDEAIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
LD +SD I+GLN+P G+P VYELDE+L P+ +LGD+E + KA AVA QGK+
Sbjct: 201 LDGISDADIVGLNIPNGVPLVYELDESLTPIRHY-YLGDQEAIAKAQAAVAQQGKS 255
>pdb|3LNT|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
pdb|3LNT|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
Length = 250
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 122 YMVAAWLQIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKH 181
Y + ++ E+ P+ E LK T+ R LP WN I P +K GK++LIAAHGNSLR ++K+
Sbjct: 134 YADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAHGNSLRALIKY 193
Query: 182 LDNMSDEAIMGLNLPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
LD +SD I+GLN+P G+P VYELDE+L P+ +LGD+E + KA AVA QGK+
Sbjct: 194 LDGISDADIVGLNIPNGVPLVYELDESLTPIRHY-YLGDQEAIAKAQAAVAQQGKS 248
>pdb|4PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|1BQ3|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ4|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|5PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|F Chain F, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|G Chain G, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|H Chain H, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|E Chain E, Saccharomyces Cerevisiae Phosphoglycerate Mutase
Length = 246
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 135 FPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLN 194
P ESL L I+R LPYW +VI L GK ++IAAHGNSLRG+VKHL+ +SD I LN
Sbjct: 145 LPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLN 204
Query: 195 LPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGK 236
+PTGIP V+ELDENLKP +L D E AVANQGK
Sbjct: 205 IPTGIPLVFELDENLKPSKPSYYL-DPEAAAAGAAAVANQGK 245
>pdb|1QHF|A Chain A, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
pdb|1QHF|B Chain B, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
Length = 240
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 61/87 (70%)
Query: 135 FPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLN 194
P ESL L I+R LPYW +VI L GK ++IAAHGNSLRG+VKHL+ +SD I LN
Sbjct: 145 LPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLN 204
Query: 195 LPTGIPFVYELDENLKPVVSMKFLGDE 221
+PTGIP V+ELDENLKP +L E
Sbjct: 205 IPTGIPLVFELDENLKPSKPSYYLDPE 231
>pdb|4EO9|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpm1 From
Mycobacterium Leprae
Length = 268
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 136 PMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNL 195
P+ E L + R LPY+ +VIVP L+ G+ +LI AHGNSLR +VKHLD MSD+ ++GLN+
Sbjct: 171 PLTECLADVVTRFLPYFTDVIVPDLRTGRTVLIVAHGNSLRALVKHLDEMSDDEVVGLNV 230
Query: 196 PTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGK 236
PTGIP Y+LD +L+PVV D E A AV +Q +
Sbjct: 231 PTGIPLRYDLDADLRPVVPGGTYLDPE----AAAAVISQAR 267
>pdb|3D8H|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
pdb|3D8H|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
Length = 267
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 135 FPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLN 194
P E LK T+ER PY+ +VI P + GK +L++AHGNSLR ++ L+ M+ E I+ +N
Sbjct: 165 LPTTECLKDTVERVKPYFEDVIAPSIMSGKSVLVSAHGNSLRALLYLLEGMTPEQILEVN 224
Query: 195 LPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGKA 237
+PT P V ELD+ LK V +L EE +K MEAVANQGKA
Sbjct: 225 IPTACPLVLELDDYLK-VTKKYYLISEEELKAKMEAVANQGKA 266
>pdb|1RII|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|C Chain C, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|D Chain D, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
Length = 265
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 136 PMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNL 195
P+ E L + R LPY+ +VIV L+ GK +LI AHGNSLR +VKHLD MSD+ I+GLN+
Sbjct: 148 PLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNI 207
Query: 196 PTGIPFVYELDENLKPVV 213
PTGIP Y+LD ++P+V
Sbjct: 208 PTGIPLRYDLDSAMRPLV 225
>pdb|3PGM|A Chain A, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
pdb|3PGM|B Chain B, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
Length = 244
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 135 FPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLN 194
P ESL L I+R LPYW +VI + GK +IAAHGNSLRG+VKHL+ +SD I LN
Sbjct: 145 LPETESLALVIDRLLPYWQDVIAKLV--GKTSMIAAHGNSLRGLVKHLEGISDADIAKLN 202
Query: 195 LPTGIPFVYELDENLKPVVSMKFLGDEETVKKAMEAVANQGK 236
+P G V+ELDENLKP +L D E AVANQGK
Sbjct: 203 IPPGTILVFELDENLKPSKPSYYL-DPEAAAAGAAAVANQGK 243
>pdb|1FZT|A Chain A, Solution Structure And Dynamics Of An Open B-Sheet,
Glycolytic Enzyme-Monomeric 23.7 Kda Phosphoglycerate
Mutase From Schizosaccharomyces Pombe
Length = 211
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%)
Query: 123 MVAAWLQIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHL 182
V W + P ESLK T ER LPY+ + IVP + +G+K+LIAAHGNSLR ++ L
Sbjct: 115 QVQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDL 174
Query: 183 DNMSDEAIMGLNLPTGIPFVYELDENLKPV 212
+ ++ + I+ L TG+P VY LD++ K V
Sbjct: 175 EGLTGDQIVKRELATGVPIVYHLDKDGKYV 204
>pdb|1EA9|C Chain C, Cyclomaltodextrinase
pdb|1EA9|D Chain D, Cyclomaltodextrinase
Length = 583
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 25/132 (18%)
Query: 115 FMQPTSVYMVAAWL------QIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILI 168
F+ P V+ AW+ QI E F ++ + E TLP+ + P
Sbjct: 115 FINPVDVFQPPAWVKDAIFYQIFPERFANGDT-RNDPEGTLPWGSADPTPS--------- 164
Query: 169 AAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVYELDENLKPVVSMKF-----LGDEET 223
G L+G++ HLD++S +G+N P +++ N K F GD++T
Sbjct: 165 CFFGGDLQGVIDHLDHLSK---LGVNAVYFTP-LFKATTNHKYDTEDYFQIDPQFGDKDT 220
Query: 224 VKKAMEAVANQG 235
+KK ++ +G
Sbjct: 221 LKKLVDLCHERG 232
>pdb|1GVI|A Chain A, Thermus Maltogenic Amylase In Complex With Beta-Cd
pdb|1GVI|B Chain B, Thermus Maltogenic Amylase In Complex With Beta-Cd
Length = 588
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 172 GNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVYELDENLKPVVSMKF-----LGDEETVKK 226
G L+GI+ HLD ++D I G+ L ++ N K + F GD+ET+K
Sbjct: 172 GGDLQGIIDHLDYLADLGITGIYLTP----IFRAPSNHKYDTADYFEIDPHFGDKETLKT 227
Query: 227 AMEAVANQG 235
++ +G
Sbjct: 228 LVKRCHEKG 236
>pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase
pdb|1SMA|B Chain B, Crystal Structure Of A Maltogenic Amylase
Length = 588
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 172 GNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVYELDENLKPVVSMKF-----LGDEETVKK 226
G L+GI+ HLD ++D I G+ L ++ N K + F GD+ET+K
Sbjct: 172 GGDLQGIIDHLDYLADLGITGIYLTP----IFRAPSNHKYDTADYFEIDPHFGDKETLKT 227
Query: 227 AMEAVANQG 235
++ +G
Sbjct: 228 LVKRCHEKG 236
>pdb|1J0H|A Chain A, Crystal Structure Of Bacillus Stearothermophilus
Neopullulanase
pdb|1J0H|B Chain B, Crystal Structure Of Bacillus Stearothermophilus
Neopullulanase
pdb|1J0I|A Chain A, Crystal Structure Of Neopullulanase Complex With Panose
pdb|1J0I|B Chain B, Crystal Structure Of Neopullulanase Complex With Panose
Length = 588
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 127 WLQIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMS 186
W QI E F + ++ E + P+ + P + G L+GI+ HLD +
Sbjct: 137 WYQIFPERFAN-GNPSISPEGSRPWGSEDPTP---------TSFFGGDLQGIIDHLDYLV 186
Query: 187 DEAIMGLNLPTGIPFVYELDENLKPVVSMKF-----LGDEETVKKAMEAVANQG 235
D I G+ L ++ N K + F GD+ET+K ++ +G
Sbjct: 187 DLGITGIYLTP----IFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKG 236
>pdb|1J0J|A Chain A, Crystal Structure Of Neopullulanase E357q Complex With
Maltotetraose
pdb|1J0J|B Chain B, Crystal Structure Of Neopullulanase E357q Complex With
Maltotetraose
pdb|1J0K|A Chain A, Crystal Structure Of Neopullulanase E357q Complex With
Isopanose
pdb|1J0K|B Chain B, Crystal Structure Of Neopullulanase E357q Complex With
Isopanose
Length = 588
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 127 WLQIISEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMS 186
W QI E F + ++ E + P+ + P + G L+GI+ HLD +
Sbjct: 137 WYQIFPERFAN-GNPSISPEGSRPWGSEDPTP---------TSFFGGDLQGIIDHLDYLV 186
Query: 187 DEAIMGLNLPTGIPFVYELDENLKPVVSMKF-----LGDEETVKKAMEAVANQG 235
D I G+ L ++ N K + F GD+ET+K ++ +G
Sbjct: 187 DLGITGIYLTP----IFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKG 236
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,491,530
Number of Sequences: 62578
Number of extensions: 245928
Number of successful extensions: 622
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 589
Number of HSP's gapped (non-prelim): 29
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)