Query psy11845
Match_columns 215
No_of_seqs 104 out of 1564
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 20:24:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11845.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11845hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0588 GpmA Phosphoglycerate 100.0 3.3E-37 7.2E-42 244.6 15.6 190 2-215 28-217 (230)
2 PRK14119 gpmA phosphoglyceromu 100.0 1.1E-33 2.4E-38 233.3 19.3 190 2-215 28-217 (228)
3 PRK14116 gpmA phosphoglyceromu 100.0 2.4E-33 5.1E-38 231.3 18.8 190 2-215 28-217 (228)
4 PTZ00123 phosphoglycerate muta 100.0 2.9E-33 6.3E-38 231.9 19.2 190 2-215 15-204 (236)
5 TIGR01258 pgm_1 phosphoglycera 100.0 7.5E-33 1.6E-37 230.5 19.8 190 2-215 27-216 (245)
6 PRK14118 gpmA phosphoglyceromu 100.0 1.5E-32 3.2E-37 226.4 19.1 190 2-215 27-216 (227)
7 PRK14117 gpmA phosphoglyceromu 100.0 1.4E-32 3E-37 227.0 18.5 190 2-215 28-217 (230)
8 PRK01295 phosphoglyceromutase; 100.0 2.7E-32 5.9E-37 221.8 17.8 165 2-215 29-193 (206)
9 PRK14115 gpmA phosphoglyceromu 100.0 5.3E-32 1.2E-36 225.6 19.8 190 2-215 27-216 (247)
10 PRK14120 gpmA phosphoglyceromu 100.0 4.6E-32 1E-36 226.1 18.6 188 2-215 31-218 (249)
11 PRK01112 phosphoglyceromutase; 100.0 7.1E-32 1.5E-36 222.4 16.8 163 2-215 28-216 (228)
12 PRK15004 alpha-ribazole phosph 100.0 1.1E-30 2.4E-35 211.0 15.9 158 2-215 27-184 (199)
13 PRK13463 phosphatase PhoE; Pro 100.0 3E-30 6.5E-35 209.3 15.5 157 2-214 29-186 (203)
14 TIGR03848 MSMEG_4193 probable 100.0 4.2E-30 9.1E-35 208.4 15.4 156 2-214 27-186 (204)
15 TIGR03162 ribazole_cobC alpha- 100.0 5E-30 1.1E-34 203.1 15.4 153 2-211 24-176 (177)
16 KOG0235|consensus 100.0 1E-29 2.3E-34 204.9 14.9 167 2-215 32-199 (214)
17 PRK03482 phosphoglycerate muta 100.0 2.8E-29 6.2E-34 205.1 16.8 157 2-214 28-184 (215)
18 COG0406 phoE Broad specificity 100.0 1.9E-28 4E-33 199.0 17.0 160 2-215 29-188 (208)
19 PRK13462 acid phosphatase; Pro 100.0 1.6E-28 3.6E-33 199.1 15.2 150 2-214 32-181 (203)
20 PRK07238 bifunctional RNase H/ 99.9 5.4E-27 1.2E-31 206.3 16.9 157 2-214 198-354 (372)
21 PF00300 His_Phos_1: Histidine 99.9 4.5E-25 9.7E-30 170.3 12.8 133 2-187 26-158 (158)
22 PTZ00322 6-phosphofructo-2-kin 99.9 3.5E-24 7.5E-29 200.7 16.9 160 2-214 444-624 (664)
23 smart00855 PGAM Phosphoglycera 99.9 3.7E-24 8.1E-29 166.0 13.0 128 2-187 26-155 (155)
24 PTZ00122 phosphoglycerate muta 99.9 1.2E-21 2.7E-26 167.2 12.5 141 2-214 126-274 (299)
25 cd07067 HP_PGM_like Histidine 99.8 2.3E-19 5E-24 138.4 12.0 116 2-214 26-141 (153)
26 cd07040 HP Histidine phosphata 99.7 1.2E-16 2.5E-21 122.6 12.6 115 2-214 26-141 (153)
27 TIGR00249 sixA phosphohistidin 99.7 9.1E-16 2E-20 119.1 13.4 46 2-47 23-68 (152)
28 KOG4609|consensus 99.7 3E-16 6.4E-21 125.2 10.5 144 1-214 113-259 (284)
29 PRK10848 phosphohistidine phos 99.6 8.8E-15 1.9E-19 114.3 13.7 46 2-47 23-68 (159)
30 KOG3734|consensus 99.6 3E-14 6.5E-19 118.6 11.5 147 2-195 70-217 (272)
31 PRK06193 hypothetical protein; 99.6 6.6E-14 1.4E-18 113.3 12.9 118 2-209 74-192 (206)
32 KOG0234|consensus 99.5 5.5E-14 1.2E-18 123.3 11.7 154 2-214 264-417 (438)
33 KOG4754|consensus 99.5 8.1E-14 1.8E-18 111.1 10.1 142 1-194 47-202 (248)
34 COG2062 SixA Phosphohistidine 99.5 1.2E-13 2.6E-18 107.5 10.9 46 2-47 26-71 (163)
35 PRK15416 lipopolysaccharide co 99.5 7E-13 1.5E-17 106.7 11.8 57 2-64 80-136 (201)
36 cd07061 HP_HAP_like Histidine 97.7 0.0017 3.8E-08 53.5 13.7 48 1-48 18-75 (242)
37 PF00328 His_Phos_2: Histidine 95.6 0.023 5.1E-07 48.5 5.5 47 1-47 62-117 (347)
38 KOG3720|consensus 94.4 0.075 1.6E-06 47.7 5.3 48 1-48 70-129 (411)
39 PRK10172 phosphoanhydride phos 91.9 0.52 1.1E-05 42.6 6.6 53 1-53 72-138 (436)
40 KOG1057|consensus 90.0 0.51 1.1E-05 45.2 4.9 46 1-46 511-571 (1018)
41 PRK10173 glucose-1-phosphatase 88.9 1.2 2.5E-05 40.2 6.2 47 1-47 70-129 (413)
42 COG2390 DeoR Transcriptional r 46.7 82 0.0018 27.4 6.8 51 151-202 94-144 (321)
43 KOG3672|consensus 44.6 45 0.00097 29.9 4.8 79 1-79 168-262 (487)
44 PF09370 TIM-br_sig_trns: TIM- 43.2 17 0.00038 30.7 2.0 38 146-187 190-227 (268)
45 KOG1382|consensus 43.0 62 0.0014 29.6 5.6 47 2-48 133-184 (467)
46 PF12048 DUF3530: Protein of u 42.4 57 0.0012 28.1 5.2 47 148-196 167-216 (310)
47 cd04256 AAK_P5CS_ProBA AAK_P5C 37.9 27 0.00059 29.7 2.5 30 152-185 31-60 (284)
48 PF00328 His_Phos_2: Histidine 34.0 1.8E+02 0.004 24.3 7.1 41 173-214 290-332 (347)
49 PRK04946 hypothetical protein; 33.4 1.8E+02 0.0039 23.1 6.3 44 147-194 102-148 (181)
50 PRK12314 gamma-glutamyl kinase 32.7 34 0.00074 28.7 2.2 14 170-183 45-58 (266)
51 PF14606 Lipase_GDSL_3: GDSL-l 32.4 39 0.00084 26.8 2.3 33 148-182 71-103 (178)
52 PF06180 CbiK: Cobalt chelatas 30.3 51 0.0011 27.8 2.9 37 146-183 116-152 (262)
53 cd07397 MPP_DevT Myxococcus xa 30.2 65 0.0014 26.8 3.4 35 147-186 126-160 (238)
54 KOG2728|consensus 27.8 55 0.0012 27.6 2.6 35 147-184 8-42 (302)
55 TIGR00824 EIIA-man PTS system, 27.5 1.3E+02 0.0028 21.7 4.4 45 144-193 35-82 (116)
56 PF13422 DUF4110: Domain of un 26.7 89 0.0019 22.2 3.1 26 143-168 11-36 (96)
57 COG1136 SalX ABC-type antimicr 25.4 1.2E+02 0.0025 25.1 4.1 38 152-192 176-213 (226)
58 COG1416 Uncharacterized conser 25.1 1.8E+02 0.0039 21.3 4.5 40 151-192 13-52 (112)
59 PLN03034 phosphoglycerate kina 25.1 1.6E+02 0.0034 27.3 5.2 27 155-182 115-141 (481)
60 cd00006 PTS_IIA_man PTS_IIA, P 24.4 75 0.0016 23.0 2.6 17 174-190 2-18 (122)
61 PF12000 Glyco_trans_4_3: Gkyc 23.2 1.2E+02 0.0025 23.9 3.6 23 10-32 53-75 (171)
62 PRK14484 phosphotransferase ma 21.1 1.2E+02 0.0026 22.5 3.1 17 174-190 3-20 (124)
63 PLN02282 phosphoglycerate kina 21.1 2.2E+02 0.0048 25.6 5.3 27 155-182 40-66 (401)
64 TIGR02689 ars_reduc_gluta arse 20.2 94 0.002 22.7 2.4 18 173-190 1-18 (126)
No 1
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-37 Score=244.63 Aligned_cols=190 Identities=56% Similarity=0.895 Sum_probs=177.0
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||...|+.|++.++.||.+|||-++||++|+.++++.+++..+|+..+.+|||++||.++|+.++++.+++++
T Consensus 28 LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv~kswrLNERhYG~LqGlnK~~t~~kyGe 107 (230)
T COG0588 28 LTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPVIKSWRLNERHYGALQGLNKAETAAKYGE 107 (230)
T ss_pred cchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcchhhHHHhhhhhhhhhhcCChHHHHHHHhH
Confidence 89999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
+++..|++.|+++||+++.+ +++++. .|++|++ ......|..||..++.+|+..+|
T Consensus 108 eqv~~wRRsydi~PP~~~~~---------------------~~~~~~--~d~ry~~-~~~~~~p~~EsLkdt~~Rv~Pyw 163 (230)
T COG0588 108 EQVLIWRRSYDIPPPKLEKD---------------------DERSPH--RDRRYAH-LDIGGLPLTESLKDTVERVLPYW 163 (230)
T ss_pred HHHHHHHHhcCCCCCCcccc---------------------cccccc--ccccccc-ccccCCCccchHHHHHHHhhHHH
Confidence 99999999999999998887 666665 5677766 33344567899999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
++.|...+.++++|+||+||+++|+|+.+|.+++.+++.++++|||.|+|||++
T Consensus 164 ~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~~l~IPtg~Plvyeld 217 (230)
T COG0588 164 EDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDILDLNIPTGIPLVYELD 217 (230)
T ss_pred HHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhhhcccCCCCcEEEEEC
Confidence 999999889999999999999999999999999999999999999999999986
No 2
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.1e-33 Score=233.30 Aligned_cols=190 Identities=44% Similarity=0.730 Sum_probs=151.4
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.++++|+..+.++++|||||++||+|||++|++..+...+++..+++|+|++||.|+|++.+++...+++
T Consensus 28 Lt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~~~~~~LrE~~fG~weG~~~~ei~~~~~~ 107 (228)
T PRK14119 28 LSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGE 107 (228)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCeeECCCccccccccccCCcHHHHHHHccH
Confidence 89999999999999998755789999999999999999999876542235788899999999999999999999999988
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
..+..|...+...||+.... ..+. ...++.|.. +....+|+|||+.++.+|+..+|
T Consensus 108 ~~~~~w~~~~~~~~p~~~~~--------------------~~~~---~~~~~~~~~-~~~~~~p~GES~~~~~~Rv~~~l 163 (228)
T PRK14119 108 EQVHIWRRSYDVKPPAETEE--------------------QREA---YLADRRYNH-LDKRMMPYSESLKDTLVRVIPFW 163 (228)
T ss_pred HHHHHHHcccccCCCccccc--------------------cccc---ccccccccc-cccccCCCCCCHHHHHHHHHHHH
Confidence 77888987766655542111 0000 001112211 12234689999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
.+++......+++|||||||++|+++++++++++...++.+.++||.+.+|+++
T Consensus 164 ~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (228)
T PRK14119 164 TDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELT 217 (228)
T ss_pred HHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHhhcCCCCCceEEEEEC
Confidence 994443323568999999999999999999999999999999999999999874
No 3
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.4e-33 Score=231.30 Aligned_cols=190 Identities=48% Similarity=0.772 Sum_probs=148.4
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|+.|+..+.++++|||||+.||+|||++|++..+...+++..+++|+|++||.|+|++.+++.+.+++
T Consensus 28 Lt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~ 107 (228)
T PRK14116 28 LSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPETKTWRLNERHYGALQGLNKKETAEKYGD 107 (228)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCcccCcccccccchhhcCCCHHHHHHHhhh
Confidence 89999999999999998755689999999999999999999877643235778899999999999999999999999987
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.....|...+...|+....+ .+.....+..|.. +....+|+|||+.++.+|+..++
T Consensus 108 ~~~~~w~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~-~~~~~~pgGEs~~~~~~Rv~~~l 163 (228)
T PRK14116 108 EQVHIWRRSYDVLPPLLDAD-----------------------DEGSAAKDRRYAN-LDPRIIPGGENLKVTLERVIPFW 163 (228)
T ss_pred hHHHHHhhcccccCcccccc-----------------------cccccccchhhhc-cCccCCCCCCCHHHHHHHHHHHH
Confidence 66778876543333221111 0000000111111 12235689999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
.+++......+++|||||||++|+++++++++++...++.+.++||.+.+++++
T Consensus 164 ~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (228)
T PRK14116 164 EDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNLEMATGEPVVYDFD 217 (228)
T ss_pred HHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhccCCCCCeEEEEEC
Confidence 994433323568999999999999999999999999999999999999999875
No 4
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=231.85 Aligned_cols=190 Identities=54% Similarity=0.889 Sum_probs=153.2
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||++|++||+.+|+.|+..+.++++|||||+.||+|||++|++.++...+++..+++|+|+++|.|+|++.+++.+.++.
T Consensus 15 LTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~~EG~~~~ei~~~~~~ 94 (236)
T PTZ00123 15 LSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGALQGLNKSETAEKHGE 94 (236)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhcccccccCCCHHHHHHHccH
Confidence 89999999999999998766789999999999999999999988764345778899999999999999999999999987
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.....|...+...||+.... +..|+. .++.|.. .....+|++||+.++.+|+..+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~--~~~~~~~-~~~~~~p~gES~~~~~~Rv~~~l 150 (236)
T PTZ00123 95 EQVKIWRRSYDIPPPPLEKS---------------------DERYPG--NDPVYKD-IPKDALPNTECLKDTVERVLPYW 150 (236)
T ss_pred HHHHHHhcccCCCCCCcccc---------------------cccccc--cchhhhc-cccCCCCCCCCHHHHHHHHHHHH
Confidence 66777877666555443332 222211 0011110 12345689999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
.+++......+++|||||||++|+++++++++++...++.+.++||.+.+|+++
T Consensus 151 ~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~~~~~~~n~~~~~~~~~ 204 (236)
T PTZ00123 151 EDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDILELNIPTGVPLVYELD 204 (236)
T ss_pred HHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhccCCCCceEEEEEC
Confidence 984444334678999999999999999999999999999999999999999874
No 5
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=7.5e-33 Score=230.45 Aligned_cols=190 Identities=55% Similarity=0.902 Sum_probs=152.2
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|++|+..++++++|||||++||+|||++|++.++...+++..++.|+|+++|.|+|++.+++...++.
T Consensus 27 Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~~~~~L~E~~~G~~eG~~~~ei~~~~p~ 106 (245)
T TIGR01258 27 LSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVKKSWRLNERHYGALQGLNKAETAAKYGE 106 (245)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCeeeCcccccccCCCCcCCCHHHHHHHhhH
Confidence 89999999999999998766789999999999999999999988753225777889999999999999999999999987
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
..+..|...+...||++... +..+++ .|+.|.. .....+|++||+.++.+|+..++
T Consensus 107 ~~~~~w~~~~~~~~~~~~~~---------------------~~~~~~--~d~~y~~-~~~~~~p~GES~~~~~~Rv~~~l 162 (245)
T TIGR01258 107 EQVNIWRRSFDVPPPPIDES---------------------DPRSPH--NDPRYAH-LDPKVLPLTESLKDTIARVLPYW 162 (245)
T ss_pred HHHHHHHhhccCCCCcCCcc---------------------cccccc--cChhhhc-CCcccCCCCCCHHHHHHHHHHHH
Confidence 66788988776666554322 111111 1112210 01123589999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
++++.....++++|||||||++|+++++++++++....+.+.++||...+++++
T Consensus 163 ~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 216 (245)
T TIGR01258 163 NDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEILELNIPTGIPLVYELD 216 (245)
T ss_pred HHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHhheecCCCceEEEEEC
Confidence 994444334668999999999999999999999999999999999999999864
No 6
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.5e-32 Score=226.41 Aligned_cols=190 Identities=49% Similarity=0.827 Sum_probs=147.0
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|+.|+..+.+++.|||||+.||+|||++|.+..+...+++..+++|+|+++|.|+|++.+++...+++
T Consensus 27 Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~ 106 (227)
T PRK14118 27 LTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVKNWRLNERHYGALQGLDKKATAEQYGD 106 (227)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCeecCCccccccCccccCCcHHHHHHHhhH
Confidence 89999999999999998755689999999999999999999876642135778889999999999999999999999987
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.....|...+...||...+..+ .. +. .+..|.. .....+|++||+.++.+|+..++
T Consensus 107 ~~~~~w~~~~~~~~~~~~~~~~-------------------~~-~~---~~~~~~~-~~~~~~p~GEs~~~~~~Rv~~~l 162 (227)
T PRK14118 107 EQVHIWRRSYDTLPPDLDPQDP-------------------NS-AH---NDRRYAH-LPADVVPDAENLKVTLERVLPFW 162 (227)
T ss_pred HHHHHHHhccccCCCccccccc-------------------cc-cc---cchhhcc-CcCCCCCCCCCHHHHHHHHHHHH
Confidence 6677787654433332211100 00 00 0000000 02245689999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
.+++......+++|||||||++|+++++++++.+...++.+.+++|...+++++
T Consensus 163 ~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~~~~i~~~s~~~~~~~ 216 (227)
T PRK14118 163 EDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLD 216 (227)
T ss_pred HHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhcccCCCCceEEEEEC
Confidence 984432223568999999999999999999999999999999999999999874
No 7
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.4e-32 Score=227.01 Aligned_cols=190 Identities=48% Similarity=0.808 Sum_probs=148.9
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|+.|+..+.++++|||||+.||+|||+++++..+...+++..+++|+|+++|.|+|++.+++.+.++.
T Consensus 28 Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~ 107 (230)
T PRK14117 28 LSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGD 107 (230)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCceeCCccccccchhhcCCCHHHHHHHccH
Confidence 89999999999999998655789999999999999999998764432246788899999999999999999999999988
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.....|...+...||.+... .. +.. -.+..|.. +....+|++||+.++.+|+..+|
T Consensus 108 ~~~~~w~~~~~~~~~~~~~~---------------------~~-~~~-~~~~~~~~-~~~~~~p~GEs~~~~~~Rv~~~l 163 (230)
T PRK14117 108 EQVHIWRRSYDVLPPAMAKD---------------------DE-YSA-HTDRRYAS-LDDSVIPDAENLKVTLERALPFW 163 (230)
T ss_pred HHHHHHhcccccCCCccccc---------------------cc-ccc-cccccccc-cccCCCCCCCCHHHHHHHHHHHH
Confidence 66778887665555533211 00 000 00001111 23346789999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
++++......+++|||||||++|+++++++++++....+.+.++||...+++++
T Consensus 164 ~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~~~~~~n~s~~~i~~~ 217 (230)
T PRK14117 164 EDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDVEIPNFPPLVFEFD 217 (230)
T ss_pred HHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHhhcCCCCceEEEEEEC
Confidence 994433333468999999999999999999999999999999999999998863
No 8
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.7e-32 Score=221.78 Aligned_cols=165 Identities=48% Similarity=0.701 Sum_probs=140.9
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.++++|+..+.++++|||||+.||+|||++|++.++...+++..+++|+|+++|.|+|++.+++.+.+++
T Consensus 29 Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~~eg~~~~e~~~~~~~ 108 (206)
T PRK01295 29 LTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLETIRDQALNERDYGDLSGLNKDDARAKWGE 108 (206)
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCCeEECCcccccccccccCCcHHHHHHHchH
Confidence 89999999999999998766789999999999999999999998864346888999999999999999999999998876
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.....|... ....+|+|||+.++.+|+..++
T Consensus 109 ~~~~~~~~~-------------------------------------------------~~~~~p~GES~~~~~~Rv~~~~ 139 (206)
T PRK01295 109 EQVHIWRRS-------------------------------------------------YDVPPPGGESLKDTGARVLPYY 139 (206)
T ss_pred HHHHHhhcc-------------------------------------------------cCCCCcCCCCHHHHHHHHHHHH
Confidence 555556432 2234588999999999999975
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
.+.|......+++|||||||++|+++++++++++...++.+.+.+|.++++.++
T Consensus 140 ~~~i~~~~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 193 (206)
T PRK01295 140 LQEILPRVLRGERVLVAAHGNSLRALVMVLDGLTPEQILKLELATGVPIVYRLN 193 (206)
T ss_pred HHHHHHhccCCCeEEEEcChHHHHHHHHHHhCCCHHHHhhcCCCCCCcEEEEec
Confidence 432544333568999999999999999999999999999999999999998764
No 9
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=5.3e-32 Score=225.58 Aligned_cols=190 Identities=62% Similarity=0.972 Sum_probs=151.1
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|+.|+..+.++++|||||+.||+|||++|.+.++...+++..+++|+|++||.|+|++.+++.+.++.
T Consensus 27 Lte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~fG~~eG~~~~ei~~~~~~ 106 (247)
T PRK14115 27 LSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVEKSWRLNERHYGALQGLNKAETAAKYGD 106 (247)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCceECccccccccccccCCCHHHHHHHhhH
Confidence 89999999999999998766789999999999999999999988763235778899999999999999999999999887
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
..+..|...+...++...+. +..++. .|+.|.. .....+|++||+.++..|+..+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~--~~~~~~~-~~~~~~p~GES~~~~~~Rv~~~l 162 (247)
T PRK14115 107 EQVKIWRRSYDVPPPALEKD---------------------DERYPG--HDPRYAK-LPEEELPLTESLKDTIARVLPYW 162 (247)
T ss_pred HHHHHHhcccccCCCccccc---------------------cccccc--ccchhhc-ccCCCCCCCCcHHHHHHHHHHHH
Confidence 66888887765544432211 000000 0111210 01234689999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
+.++......+++|||||||++|+++++++++++...++.+.+++|..++|+++
T Consensus 163 ~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~~~~~~~~~~~~l~~~ 216 (247)
T PRK14115 163 NETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEILELNIPTGVPLVYELD 216 (247)
T ss_pred HHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhheeecCCCceEEEEEC
Confidence 984443334568999999999999999999999999999999999999999874
No 10
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.6e-32 Score=226.06 Aligned_cols=188 Identities=53% Similarity=0.830 Sum_probs=148.7
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+++.|+..+..++.|||||+.||+|||++|++..+...+++..+++|+|++||.|+|++..++.+.+++
T Consensus 31 LTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~~~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~ 110 (249)
T PRK14120 31 LTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLWIPVRRSWRLNERHYGALQGKDKAETKAEYGE 110 (249)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCCCCeEECCCcccccccccCCCCHHHHHHHccH
Confidence 89999999999999998755679999999999999999999875543246788899999999999999999999999987
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
..+..|...+..++|....+ ..|.. -.|+.|. ...++|++||+.++.+|+..+|
T Consensus 111 ~~~~~w~~~~~~~~p~~~~~----------------------~~~~~-~~d~~~~---~~~~~p~GES~~~~~~Rv~~~l 164 (249)
T PRK14120 111 EQFMLWRRSYDTPPPPIEDG----------------------SEYSQ-DNDPRYA---DLGVGPRTECLKDVVARFLPYW 164 (249)
T ss_pred HHHHHHHhccccCCCccccc----------------------ccccc-ccCcccc---ccCCCCCCCCHHHHHHHHHHHH
Confidence 66788887655544421111 00100 0111111 1123489999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
.+++......+++|||||||++|+++++++++++....+.+.+++|.+.+|+++
T Consensus 165 ~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 218 (249)
T PRK14120 165 EDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIAGLNIPTGIPLVYELD 218 (249)
T ss_pred HHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhheeccCCCceEEEEEC
Confidence 884444334668999999999999999999999999999999999999999874
No 11
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=7.1e-32 Score=222.41 Aligned_cols=163 Identities=42% Similarity=0.654 Sum_probs=140.3
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcC--------------------------CCCCCccc
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIG--------------------------QEDLPVHK 55 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~--------------------------~~~~~~~~ 55 (215)
||+.|++||+.+|++|+. .++++|||||+.||+|||++|++.++ ...+++..
T Consensus 28 Lte~G~~Qa~~l~~~L~~--~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (228)
T PRK01112 28 LSQQGIAEAIAAGEKIKD--LPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIVHEEDDKKWMSRIYSDEEPEQMIPLFQ 105 (228)
T ss_pred cCHHHHHHHHHHHHHhhc--CCCCEEEEcCcHHHHHHHHHHHHhhcccccccccccccccccccccccccccccCCCeee
Confidence 899999999999999987 78999999999999999999985331 11356778
Q ss_pred ccccccccCCCCCCCCHHHHHHHHhHHHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCC
Q psy11845 56 SWRLNERHYGGLTGLDKAATAAKYGEEQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRY 135 (215)
Q Consensus 56 ~~~l~E~~~g~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 135 (215)
+++|+|+++|.|+|++.+++.+.++......|...
T Consensus 106 ~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~--------------------------------------------- 140 (228)
T PRK01112 106 SSALNERMYGELQGKNKAETAEKFGEEQVKLWRRS--------------------------------------------- 140 (228)
T ss_pred cCccccccccccCCCCHHHHHHHCcHHHHHHHhCc---------------------------------------------
Confidence 99999999999999999999999887666677643
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 136 ASEPSKEEFPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 136 ~~~~~~~~~~~~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
....+|+|||+.++.+|+..++...+.+....+++|+|||||++|+++++.+++++...+..+.++||.+.+|+++
T Consensus 141 ----~~~~~p~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 216 (228)
T PRK01112 141 ----YKTAPPQGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKPIVYEWT 216 (228)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhcccCCcceEEEEEC
Confidence 2234578999999999999999984544334568999999999999999999999999999999999999999874
No 12
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=99.97 E-value=1.1e-30 Score=211.03 Aligned_cols=158 Identities=20% Similarity=0.225 Sum_probs=135.1
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|+.|+. .++++|||||+.||+|||+++++.++ +++.++++|+|+++|.|+|++..++...+++
T Consensus 27 Lt~~G~~Qa~~~~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~~~~~~L~E~~~G~~eg~~~~~~~~~~~~ 101 (199)
T PRK15004 27 LTARGIEQAQNLHTLLRD--VPFDLVLCSELERAQHTARLVLSDRQ---LPVHIIPELNEMFFGDWEMRHHRDLMQEDAE 101 (199)
T ss_pred cCHHHHHHHHHHHHHHhC--CCCCEEEECchHHHHHHHHHHHhcCC---CCceeChhheeCCCcccCCCCHHHHHHHCHH
Confidence 899999999999999976 78999999999999999999988764 5788999999999999999999998877764
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.+..|.... ....+|++||+.++..|+..++
T Consensus 102 -~~~~~~~~~------------------------------------------------~~~~~~~gEs~~~~~~Rv~~~l 132 (199)
T PRK15004 102 -NYAAWCNDW------------------------------------------------QHAIPTNGEGFQAFSQRVERFI 132 (199)
T ss_pred -HHHHHHhCh------------------------------------------------hhcCCCCCcCHHHHHHHHHHHH
Confidence 344444321 2223468999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
+. |... ..+++|||||||++|+++++++++.+...++.+.++||...+++++
T Consensus 133 ~~-l~~~-~~~~~iliVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (199)
T PRK15004 133 AR-LSAF-QHYQNLLIVSHQGVLSLLIARLLGMPAEAMWHFRVEQGCWSAIDIN 184 (199)
T ss_pred HH-HHHh-CCCCeEEEEcChHHHHHHHHHHhCCCHHHHhccccCCceEEEEEec
Confidence 99 5543 3467999999999999999999999999999998999999888763
No 13
>PRK13463 phosphatase PhoE; Provisional
Probab=99.97 E-value=3e-30 Score=209.29 Aligned_cols=157 Identities=14% Similarity=0.185 Sum_probs=132.5
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||++|++||+.+++.|+. .++++|||||+.||+|||+++.+.++ +++.++++|+|+++|.|+|++..++.+.+++
T Consensus 29 Lt~~G~~Qa~~~~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~~~~~~l~E~~~G~~eG~~~~e~~~~~p~ 103 (203)
T PRK13463 29 LTENGILQAKQLGERMKD--LSIHAIYSSPSERTLHTAELIKGERD---IPIIADEHFYEINMGIWEGQTIDDIERQYPD 103 (203)
T ss_pred cCHHHHHHHHHHHHHhcC--CCCCEEEECCcHHHHHHHHHHHhcCC---CCceECcCceeCCCCccCCCcHHHHhhhCHH
Confidence 899999999999999976 78999999999999999999987664 5888999999999999999999999988876
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
. +..|... +....+|++||+.++.+|+..++
T Consensus 104 ~-~~~~~~~------------------------------------------------~~~~~~~~gEs~~~~~~R~~~~l 134 (203)
T PRK13463 104 D-IQLFWNE------------------------------------------------PHLFQSTSGENFEAVHKRVIEGM 134 (203)
T ss_pred H-HHHHHhC------------------------------------------------hhccCCCCCeEHHHHHHHHHHHH
Confidence 3 3333321 12234578999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccc-cCCCCeEEEec
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLN-LPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 214 (215)
.. |... ..+++|||||||++|+++++++++.+....+.+. +++|...++++
T Consensus 135 ~~-i~~~-~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 186 (203)
T PRK13463 135 QL-LLEK-HKGESILIVSHAAAAKLLVGHFAGIEIENVWDDPFMHSASLSIIEF 186 (203)
T ss_pred HH-HHHh-CCCCEEEEEeChHHHHHHHHHHhCCCHHHHhhccCccCceEEEEEE
Confidence 98 5443 3567999999999999999999999988877754 57888888876
No 14
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.97 E-value=4.2e-30 Score=208.37 Aligned_cols=156 Identities=21% Similarity=0.205 Sum_probs=130.9
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+++|++|+. .+++.|||||+.||+|||++|++.++ +++.++++|+|+++|.|+|++.+++...
T Consensus 27 Lt~~G~~qa~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~~~~~~L~E~~~G~~eG~~~~e~~~~--- 98 (204)
T TIGR03848 27 LDERGREQAAALAERLAD--LPIAAIVSSPLERCRETAEPIAEARG---LPPRVDERLGECDYGDWTGRELKELAKE--- 98 (204)
T ss_pred cCHHHHHHHHHHHHHHhc--CCCCEEEeCcHHHHHHHHHHHHHhcC---CCceECcccccCCCCeeCCcCHHHHhCc---
Confidence 899999999999999986 78999999999999999999998774 5889999999999999999999887653
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
..+..|... +....+|++||+.++..|+..++
T Consensus 99 ~~~~~~~~~------------------------------------------------~~~~~~p~gEs~~~~~~R~~~~l 130 (204)
T TIGR03848 99 PLWPVVQAH------------------------------------------------PSAAVFPGGESLAQVQARAVAAV 130 (204)
T ss_pred HHHHHHhcC------------------------------------------------cccCCCCCCCCHHHHHHHHHHHH
Confidence 122333221 12234578999999999999999
Q ss_pred HHhcccc----ccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 162 NNVIVPQ----LKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~----~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
.. +.+. ...+++|||||||++|+++++++++.+...++.+.++||...++++
T Consensus 131 ~~-~~~~~~~~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~~~~~~~n~sit~l~~ 186 (204)
T TIGR03848 131 RE-HDARLAAEHGPDAVWVACSHGDVIKSVLADALGMHLDLFQRIVVDPCSVSVVRY 186 (204)
T ss_pred HH-HHHHhhhccCCCCEEEEEeCChHHHHHHHHHhCCCHHHhheeeeCCCeEEEEEE
Confidence 88 4332 1245789999999999999999999999888889999999888876
No 15
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.97 E-value=5e-30 Score=203.07 Aligned_cols=153 Identities=23% Similarity=0.322 Sum_probs=131.5
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|+.|+. .+++.|||||+.||+|||+++++.++ +++.+++.|+|+++|.|+|++.+++...++
T Consensus 24 Lt~~G~~qa~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~~~~~~L~E~~~G~~~g~~~~~~~~~~~- 97 (177)
T TIGR03162 24 LAEKGAEQAAALREKLAD--VPFDAVYSSPLSRCRELAEILAERRG---LPIIKDPRLREMDFGDWEGRSWDEIPEAYP- 97 (177)
T ss_pred cChhHHHHHHHHHHHhcC--CCCCEEEECchHHHHHHHHHHHhhcC---CCceECCccccccCCccCCCCHHHHHHhCH-
Confidence 899999999999999976 78999999999999999999998775 478889999999999999999999888776
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.+..|... +....+|++||+.++.+|+..++
T Consensus 98 -~~~~~~~~------------------------------------------------~~~~~~~~gEs~~~~~~R~~~~~ 128 (177)
T TIGR03162 98 -ELDAWAAD------------------------------------------------WQHARPPGGESFADFYQRVSEFL 128 (177)
T ss_pred -HHHHHHhC------------------------------------------------cccCCCcCCCCHHHHHHHHHHHH
Confidence 24445432 12334578999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEE
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFV 211 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~ 211 (215)
.. |... ..+++|||||||++|+++++++++.+...++.+.++||...+
T Consensus 129 ~~-l~~~-~~~~~vlvVsHg~~i~~l~~~~~~~~~~~~~~~~~~n~~i~~ 176 (177)
T TIGR03162 129 EE-LLKA-HEGDNVLIVTHGGVIRALLAHLLGLPLEQWWSFDVEYGSITL 176 (177)
T ss_pred HH-HHHh-CCCCeEEEEECHHHHHHHHHHHhCCCHHHHhccccCCeeEEe
Confidence 99 5543 356899999999999999999999999999999999987654
No 16
>KOG0235|consensus
Probab=99.97 E-value=1e-29 Score=204.92 Aligned_cols=167 Identities=49% Similarity=0.714 Sum_probs=149.7
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|.+||++++.+|...++.++.+|||+++||+|||+.|++..++..+|+..+++|+|+.||.++|+.+.++++.+++
T Consensus 32 Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~~~pv~~~~~L~ER~yG~l~Gl~~~e~~~~~g~ 111 (214)
T KOG0235|consen 32 LTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQKKVPVLYTWRLNERHYGDLQGLNKRETAKRYGE 111 (214)
T ss_pred cChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccCCcceEechhhchhhhccccCccHHHHHHHcch
Confidence 89999999999999999988889999999999999999999999987678999999999999999999999999999987
Q ss_pred HHH-HHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy11845 82 EQV-LIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPY 160 (215)
Q Consensus 82 ~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~ 160 (215)
++. ..| +|.. .....+|.+||..++..|+..+
T Consensus 112 ~~~~~~~----------------------------------------------r~~~-~~~~~~p~~EsL~~~~~R~~~~ 144 (214)
T KOG0235|consen 112 EQVYEDP----------------------------------------------RLSD-LDEIPLPDGESLKDCLDRLLPF 144 (214)
T ss_pred hccccch----------------------------------------------hhcc-CCcCCCCCCccHHHHHHHHHHH
Confidence 532 111 1111 1334568899999999999999
Q ss_pred HHHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 161 WNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 161 l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
|++.|.....++.+||||+||+++|+++.++.+++...+..+++++|.|++|+++
T Consensus 145 ~~e~i~~~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i~~~~~~t~vp~v~~ld 199 (214)
T KOG0235|consen 145 WNEEIAKESKEGKNVLIVAHGNSLRAIVKHLEGISDEAIKELNLPTGVPIVYELD 199 (214)
T ss_pred HHHhhhhhhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhhhheecccCCceEEEcc
Confidence 9998888778899999999999999999999999999999999999999999975
No 17
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.97 E-value=2.8e-29 Score=205.06 Aligned_cols=157 Identities=18% Similarity=0.127 Sum_probs=130.8
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+|+.|+. .+++.|||||+.||+|||++|++.++ +++.++++|+|+++|.|+|+..+++....
T Consensus 28 Lt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~i~~~~~---~~~~~~~~L~E~~~G~~eg~~~~~~~~~~-- 100 (215)
T PRK03482 28 LTAKGEQQAMQVAERAKE--LGITHIISSDLGRTRRTAEIIAQACG---CDIIFDPRLRELNMGVLEKRHIDSLTEEE-- 100 (215)
T ss_pred cCHHHHHHHHHHHHHHhc--CCCCEEEECCcHHHHHHHHHHHHhcC---CCeeEChhccccCCccccCCcHHHHHhhH--
Confidence 899999999999999987 68999999999999999999998875 47888999999999999999998876443
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
..|...+... +....+|++||+.++.+|+..++
T Consensus 101 ---~~~~~~~~~~--------------------------------------------~~~~~~p~gEs~~~~~~Rv~~~l 133 (215)
T PRK03482 101 ---EGWRRQLVNG--------------------------------------------TVDGRIPEGESMQELSDRMHAAL 133 (215)
T ss_pred ---HHHHHhhhcC--------------------------------------------CCccCCCCCccHHHHHHHHHHHH
Confidence 2343321000 11233578999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
.+ |... .++++|||||||++|+++++++++.+......+.++||...++++
T Consensus 134 ~~-~~~~-~~~~~vliVsHg~~i~~l~~~l~~~~~~~~~~~~~~n~sis~~~~ 184 (215)
T PRK03482 134 ES-CLEL-PQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSISRVDY 184 (215)
T ss_pred HH-HHHh-CCCCeEEEEeCcHHHHHHHHHHhCCChhhhhccCCCCcEEEEEEE
Confidence 99 5433 456789999999999999999999998888888899999888876
No 18
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.96 E-value=1.9e-28 Score=198.98 Aligned_cols=160 Identities=26% Similarity=0.322 Sum_probs=137.4
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+++.|+..+.+++.|||||+.||+|||+++++.++. ++..++.|+|+++|.|+|++.+++.+.++.
T Consensus 29 Lt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~---~~~~~~~l~E~~~G~~eg~~~~e~~~~~p~ 105 (208)
T COG0406 29 LTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELGL---PLEVDDRLREIDFGDWEGLTIDELAEEPPE 105 (208)
T ss_pred CCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcCC---CceecCCeeEeecccccCCcHHHHHHhCHH
Confidence 89999999999999999656899999999999999999999999965 688899999999999999999999998876
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
. ...|... |.....+++||+.++.+|+..++
T Consensus 106 ~-~~~~~~~------------------------------------------------~~~~~~~~gEs~~~~~~R~~~~~ 136 (208)
T COG0406 106 E-LAAWLAD------------------------------------------------PYLAPPPGGESLADVSKRVVAAL 136 (208)
T ss_pred H-HHHHhcC------------------------------------------------ccccCCCCCCCHHHHHHHHHHHH
Confidence 3 3334321 23444566999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEecC
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQCS 215 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (215)
.+ +... ..+++|||||||++|++++.++++.+....+.+.++|+...+++++
T Consensus 137 ~~-~~~~-~~~~~vlvVsHg~~ir~l~~~~~~~~~~~~~~~~~~~~si~~l~~~ 188 (208)
T COG0406 137 AE-LLRS-PPGNNVLVVSHGGVIRALLAYLLGLDLEELWRLRLDNASVTVLEFD 188 (208)
T ss_pred HH-HHHh-cCCCeEEEEEChHHHHHHHHHhcCCChhhHHhcCCCCceEEEEEee
Confidence 99 5544 2334899999999999999999999888888889999998888864
No 19
>PRK13462 acid phosphatase; Provisional
Probab=99.96 E-value=1.6e-28 Score=199.14 Aligned_cols=150 Identities=21% Similarity=0.208 Sum_probs=124.0
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+++.|+...+..+.|||||+.||+|||+++ .+. .+..+++|+|+++|.|+|++..++...++.
T Consensus 32 Lt~~G~~QA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i--~~~----~~~~~~~LrE~~~G~~eG~~~~ei~~~~~~ 105 (203)
T PRK13462 32 LTETGRTQAELAGQALGELELDDPLVISSPRRRALDTAKLA--GLT----VDEVSGLLAEWDYGSYEGLTTPQIRESEPD 105 (203)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCEEEECchHHHHHHHHHh--cCc----ccccCccccccCCccccCCcHHHHHHhCch
Confidence 89999999999999998733333389999999999999987 221 236789999999999999999998877653
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
+..|. ...|++||+.++.+|+..++
T Consensus 106 --~~~~~-----------------------------------------------------~~~p~gES~~~~~~Rv~~~l 130 (203)
T PRK13462 106 --WLVWT-----------------------------------------------------HGCPGGESVAQVNERADRAV 130 (203)
T ss_pred --HHhhc-----------------------------------------------------CCCCCCccHHHHHHHHHHHH
Confidence 11121 12268999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
+. |... ..+++|||||||++|+++++++++.+....+.+.++||...++++
T Consensus 131 ~~-i~~~-~~~~~vliVsHg~vir~ll~~~l~~~~~~~~~~~~~~~s~s~~~~ 181 (203)
T PRK13462 131 AL-ALEH-MESRDVVFVSHGHFSRAVITRWVELPLAEGSRFAMPTASIAICGF 181 (203)
T ss_pred HH-HHHh-CCCCCEEEEeCCHHHHHHHHHHhCCCHHHhhhcccCCceEEEEEe
Confidence 99 5543 356789999999999999999999998888889999999999886
No 20
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.95 E-value=5.4e-27 Score=206.26 Aligned_cols=157 Identities=22% Similarity=0.236 Sum_probs=134.8
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+++.|+... +++.|||||+.||+|||+++++.++ +++.+++.|+|+++|.|+|++..++...++.
T Consensus 198 Lt~~G~~QA~~l~~~l~~~~-~~d~i~sSpl~Ra~qTA~~i~~~~~---~~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~ 273 (372)
T PRK07238 198 LTEVGRRQAAAAARYLAARG-GIDAVVSSPLQRARDTAAAAAKALG---LDVTVDDDLIETDFGAWEGLTFAEAAERDPE 273 (372)
T ss_pred cCHHHHHHHHHHHHHHhccC-CCCEEEECChHHHHHHHHHHHHhcC---CCcEECccceeCCCCccCCCCHHHHHHHCHH
Confidence 89999999999999998731 8999999999999999999998885 4788899999999999999999999888875
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.+..|.... ...+|++||+.++.+|+..++
T Consensus 274 -~~~~w~~~~-------------------------------------------------~~~~p~gEs~~~~~~Rv~~~l 303 (372)
T PRK07238 274 -LHRAWLADT-------------------------------------------------SVAPPGGESFDAVARRVRRAR 303 (372)
T ss_pred -HHHHHHhCC-------------------------------------------------CCCCcCCCCHHHHHHHHHHHH
Confidence 345554321 123478999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
.+ |... ..+++|+|||||++|+++++++++.+....+.+.+++|...++++
T Consensus 304 ~~-l~~~-~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~~~~~~~~~~~s~l~~ 354 (372)
T PRK07238 304 DR-LIAE-YPGATVLVVSHVTPIKTLLRLALDAGPGVLYRLHLDLASLSIAEF 354 (372)
T ss_pred HH-HHHH-CCCCeEEEEEChHHHHHHHHHHhCCCHHHhhhcccCCceEEEEEE
Confidence 99 5543 456799999999999999999999998888888899998888875
No 21
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.93 E-value=4.5e-25 Score=170.28 Aligned_cols=133 Identities=23% Similarity=0.305 Sum_probs=112.8
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|+.||+.+|+.|...+.+++.|||||+.||+|||+++.+.++ +++..++.|+|+++|.|+|.+..++...++.
T Consensus 26 Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~---~~~~~~~~l~E~~~g~~~g~~~~~~~~~~~~ 102 (158)
T PF00300_consen 26 LTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLG---IEIIVDPRLREIDFGDWEGRPFDEIEEKFPD 102 (158)
T ss_dssp BEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHT---SEEEEEGGGSCCGCGGGTTSBHHHHHHHHHH
T ss_pred ccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhcccc---cccccccccccccchhhcccchhhHHhhhhc
Confidence 8999999999999999966689999999999999999999999885 4889999999999999999999999999874
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.+..|.... ....++++||+.++..|+..++
T Consensus 103 -~~~~~~~~~------------------------------------------------~~~~~~~~Es~~~~~~R~~~~~ 133 (158)
T PF00300_consen 103 -EFEAWWSDP------------------------------------------------YFYRPPGGESWEDFQQRVKQFL 133 (158)
T ss_dssp -HHHHHHHHT------------------------------------------------SSCGSTTSHHHHHHHHHHHHHH
T ss_pred -ccchhhccc------------------------------------------------cccccccCCCHHHHHHHHHHHH
Confidence 344444321 3334478999999999999999
Q ss_pred HHhccccccCCCeEEEEeccHHHHHH
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGI 187 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l 187 (215)
.. |......+++|+|||||++|++|
T Consensus 134 ~~-l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 134 DE-LIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp HH-HHHHHHTTSEEEEEE-HHHHHHH
T ss_pred HH-HHHHhCCCCEEEEEecHHHHHhC
Confidence 99 55323578999999999999986
No 22
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.92 E-value=3.5e-24 Score=200.71 Aligned_cols=160 Identities=13% Similarity=0.064 Sum_probs=130.3
Q ss_pred CchhHHHHHHHHHHHHHhc-CCCcCEEEEcCcHHHHHHHHHHHHhc--------------CCCCCCcccccccccccCCC
Q psy11845 2 DDFDRVNEAEAAGVALAKA-GFKFDVAHTSVLTRAQNTLKAILKGI--------------GQEDLPVHKSWRLNERHYGG 66 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~-~~~~~~i~sSpl~Ra~qTA~~i~~~~--------------~~~~~~~~~~~~l~E~~~g~ 66 (215)
||+.|++||+.++++|+.. ...++.|||||++||+|||+++.+.. +..++++..++.|+|+++|.
T Consensus 444 Lt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~ 523 (664)
T PTZ00322 444 LTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEESILQQSTASAASSQSPSLNCRVLYFPTLDDINHGD 523 (664)
T ss_pred cCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhccccccccccccccccccccccccchhhhCcCCCcc
Confidence 8999999999999999864 24578999999999999999996531 00134678899999999999
Q ss_pred CCCCCHHHHHHHHhHHHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCC
Q psy11845 67 LTGLDKAATAAKYGEEQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPM 146 (215)
Q Consensus 67 ~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 146 (215)
|+|++.+++.+.+|+ .+..|... |....+|+
T Consensus 524 wEG~t~~ei~~~~p~-~~~~~~~d------------------------------------------------~~~~~~P~ 554 (664)
T PTZ00322 524 CEGQLLSDVRRTMPN-TLQSMKAD------------------------------------------------PYYTAWPN 554 (664)
T ss_pred cCCCCHHHHHHhCcH-HHHHHHhC------------------------------------------------CCcCCCCC
Confidence 999999999998876 35555432 23455689
Q ss_pred CCCHHHHH-HHHHHHHHHhccccccCCCeEEEEeccHHHHHHHHHhcCC-----CcccccccccCCCCeEEEec
Q psy11845 147 FESLKLTI-ERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNM-----SDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 147 ~Es~~~~~-~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~-----~~~~~~~~~~~~~~~~~~~~ 214 (215)
|||+.++. .|+..++.+ |.. ..++|||||||++|+++++++++. +...++.+.++++..+.+++
T Consensus 555 GES~~d~~~~R~~~~i~~-l~~---~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~ 624 (664)
T PTZ00322 555 GECIHQVFNARLEPHIHD-IQA---STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHVIKIRM 624 (664)
T ss_pred CcCHHHHHHHHHHHHHHH-HHc---cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcEEEEEE
Confidence 99999976 799999999 643 347899999999999999999985 67778888899988777764
No 23
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.92 E-value=3.7e-24 Score=166.01 Aligned_cols=128 Identities=31% Similarity=0.335 Sum_probs=104.4
Q ss_pred CchhHHHHHHHHHHHHHhc-CCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHh
Q psy11845 2 DDFDRVNEAEAAGVALAKA-GFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYG 80 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~-~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~ 80 (215)
||+.|++||+.+|+.|+.. ..+++.|||||+.||+|||+++++.++. + ..++.|+|+++|.|+|++.+++...++
T Consensus 26 Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~---~-~~~~~L~E~~~G~~~g~~~~~~~~~~~ 101 (155)
T smart00855 26 LTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGL---G-EVDPRLRERDYGAWEGLTKEEERAKAW 101 (155)
T ss_pred CCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCC---C-CCChhhhhcccceecCCcHHHHHHHHH
Confidence 8999999999999999864 3689999999999999999999988853 3 378999999999999999988876654
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy11845 81 EEQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPY 160 (215)
Q Consensus 81 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~ 160 (215)
.. |.. +....++++||+.++..|+..+
T Consensus 102 ~~----~~~-------------------------------------------------~~~~~~~~gEs~~~~~~Rv~~~ 128 (155)
T smart00855 102 TR----PAD-------------------------------------------------WLGAAPPGGESLADVVERLVRA 128 (155)
T ss_pred HH----Hhc-------------------------------------------------cCCCCCcCCCCHHHHHHHHHHH
Confidence 31 110 1233457899999999999999
Q ss_pred HHHhcccc-ccCCCeEEEEeccHHHHHH
Q psy11845 161 WNNVIVPQ-LKEGKKILIAAHGNSLRGI 187 (215)
Q Consensus 161 l~~~i~~~-~~~~~~VliVsHg~~i~~l 187 (215)
+.. |... ...+++|||||||++|+++
T Consensus 129 ~~~-i~~~~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 129 LEE-LIATHDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred HHH-HHHhcccCCCeEEEEECCcccccC
Confidence 999 5432 1356789999999999864
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.87 E-value=1.2e-21 Score=167.25 Aligned_cols=141 Identities=18% Similarity=0.053 Sum_probs=108.0
Q ss_pred CchhHHHHHHHHHHHHHhcC------CCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHH
Q psy11845 2 DDFDRVNEAEAAGVALAKAG------FKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAAT 75 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~------~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~ 75 (215)
||+.|++||+.+|++|+... .++++||||||.||+|||++|++.++ .+++..+++|+|.... .+.
T Consensus 126 LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~~--~~~v~~d~~LrEG~~~-------~~~ 196 (299)
T PTZ00122 126 LTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAFP--GVRLIEDPNLAEGVPC-------APD 196 (299)
T ss_pred CCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhCC--CCCceeCcccccCCcc-------ccC
Confidence 89999999999999998731 27999999999999999999998774 3578889999993111 000
Q ss_pred HHHHhHHHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHH
Q psy11845 76 AAKYGEEQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIE 155 (215)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~ 155 (215)
+. +....++++|+ .+..+
T Consensus 197 ----~~---------------------------------------------------------~~~~~~~gee~-~~~~~ 214 (299)
T PTZ00122 197 ----PP---------------------------------------------------------SRGFKPTIEEI-LEDMK 214 (299)
T ss_pred ----cc---------------------------------------------------------ccccCCCcchH-HHHHH
Confidence 00 00111234444 67799
Q ss_pred HHHHHHHHhcccccc--CCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 156 RTLPYWNNVIVPQLK--EGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 156 R~~~~l~~~i~~~~~--~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
|+..++.. +..+.. .++++||||||++|+++++.+++++...++.+.++||...++++
T Consensus 215 Rv~~al~~-i~~r~~~~~~~~vLVVsHGgvIR~ll~~lLglp~~~~~~~~~~N~sit~l~~ 274 (299)
T PTZ00122 215 RIEAAFEK-YFHRPVEDEDSVEIIVCHGNVIRYLVCRALQLPPEAWLRLSLYNCGITWIVI 274 (299)
T ss_pred HHHHHHHH-HHHhcccCCCCeEEEEeCChHHHHHHHHHhCcCHHHHhhccCCCceEEEEEE
Confidence 99999999 543322 24578999999999999999999998888888889998888775
No 25
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.81 E-value=2.3e-19 Score=138.41 Aligned_cols=116 Identities=37% Similarity=0.513 Sum_probs=95.2
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||+.|++||+.+++.|...+.+++.|||||+.||+|||+++.+.+. ++++..++.|+|
T Consensus 26 Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~--~~~~~~~~~L~e-------------------- 83 (153)
T cd07067 26 LTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELP--GLPVEVDPRLRE-------------------- 83 (153)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcC--CCCceeCccchH--------------------
Confidence 8999999999999999986668999999999999999999998772 246666666776
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
+|+..++
T Consensus 84 -------------------------------------------------------------------------~R~~~~~ 90 (153)
T cd07067 84 -------------------------------------------------------------------------ARVLPAL 90 (153)
T ss_pred -------------------------------------------------------------------------HHHHHHH
Confidence 2333444
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
.. +... ..+++|+|||||++|+.++.++++.+...++.+.+++|...++++
T Consensus 91 ~~-l~~~-~~~~~iliV~H~~~i~~~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 141 (153)
T cd07067 91 EE-LIAP-HDGKNVLIVSHGGVLRALLAYLLGLSDEDILRLNLPNGSISVLEL 141 (153)
T ss_pred HH-HHHh-CCCCeEEEEeChHHHHHHHHHHhCCCHHHHHhcCCCCceEEEEEE
Confidence 44 3322 246899999999999999999999988888888899999998876
No 26
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.72 E-value=1.2e-16 Score=122.57 Aligned_cols=115 Identities=34% Similarity=0.460 Sum_probs=90.4
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||++|++||+.+|+.|+.....++.|||||+.||+|||+++.+.++. .+++..++.
T Consensus 26 Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~-~~~~~~~~~----------------------- 81 (153)
T cd07040 26 LTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLFE-GLPVEVDPR----------------------- 81 (153)
T ss_pred cCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhcC-CCCeEECHH-----------------------
Confidence 89999999999999999854589999999999999999999987731 122222211
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
.|+...+
T Consensus 82 -------------------------------------------------------------------------~r~~~~~ 88 (153)
T cd07040 82 -------------------------------------------------------------------------ARVLNAL 88 (153)
T ss_pred -------------------------------------------------------------------------HHHHHHH
Confidence 4455555
Q ss_pred HHhccccc-cCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 162 NNVIVPQL-KEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~~-~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
.+ +.... ..+++|++||||++|+.++.++++.+......+.+++|...++++
T Consensus 89 ~~-~~~~~~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (153)
T cd07040 89 LE-LLARHLLDGKNVLIVSHGGTIRALLAALLGLSDEEILSLNLPNGSILVLEL 141 (153)
T ss_pred HH-HHHhhCCCCCEEEEEeCCHHHHHHHHHHhCcCHHHhccccCCCCceEEEEE
Confidence 55 33221 246899999999999999999999888777888899999999886
No 27
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.68 E-value=9.1e-16 Score=119.06 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=43.2
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcC
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIG 47 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 47 (215)
||++|++||+.++++|+..+..++.|||||+.||+|||+++.+.++
T Consensus 23 Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~ 68 (152)
T TIGR00249 23 LTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLN 68 (152)
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcC
Confidence 8999999999999999887778999999999999999999998875
No 28
>KOG4609|consensus
Probab=99.68 E-value=3e-16 Score=125.16 Aligned_cols=144 Identities=23% Similarity=0.195 Sum_probs=104.9
Q ss_pred CCchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHh
Q psy11845 1 MDDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYG 80 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~ 80 (215)
+||++|++||..+|.+|++.|+++|+|..|.|.||.|||.+|+++++. +++....+.|+|.--
T Consensus 113 hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d-~lk~~s~~ll~EGaP---------------- 175 (284)
T KOG4609|consen 113 HLTELGREQAELTGKRLAELGLKFDKVVASTMVRATETADIILKHLPD-DLKRVSCPLLREGAP---------------- 175 (284)
T ss_pred hcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCC-ccceecccccccCCC----------------
Confidence 589999999999999999999999999999999999999999999984 567777888888411
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy11845 81 EEQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPY 160 (215)
Q Consensus 81 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~ 160 (215)
+...||.. .|+ |-.--+..--.|+.++
T Consensus 176 ----------~ppdPp~k-----------------------------------~wr--------p~~~qy~rdgaRIEaa 202 (284)
T KOG4609|consen 176 ----------YPPDPPVK-----------------------------------HWR--------PLDPQYYRDGARIEAA 202 (284)
T ss_pred ----------CCCCCCcc-----------------------------------cCC--------ccChHhhhcchHHHHH
Confidence 00011110 111 1111122223466666
Q ss_pred HHHhccccc---cCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 161 WNNVIVPQL---KEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 161 l~~~i~~~~---~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
++..+-... .++.--|||+|++||+.|+++.+..|++.+.++++++|...-+.+
T Consensus 203 fRryfhRA~p~QeedSy~liV~HaNVIRY~icRALq~PpegWlR~nlnh~SiTWlti 259 (284)
T KOG4609|consen 203 FRRYFHRASPSQEEDSYELIVCHANVIRYFICRALQFPPEGWLRMNLNHCSITWLTI 259 (284)
T ss_pred HHHHHhhcCcccccccEEEEEeecchhhhhhhhhhcCCcchhheecccCcceEEEEE
Confidence 666332111 234568999999999999999999999999999999987655443
No 29
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.63 E-value=8.8e-15 Score=114.33 Aligned_cols=46 Identities=15% Similarity=0.067 Sum_probs=43.1
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcC
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIG 47 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 47 (215)
||++|++||+.++++|...+..++.|||||+.||+|||+++.+.++
T Consensus 23 Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~ 68 (159)
T PRK10848 23 LTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGECLN 68 (159)
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHHhC
Confidence 8999999999999999887778999999999999999999988775
No 30
>KOG3734|consensus
Probab=99.56 E-value=3e-14 Score=118.57 Aligned_cols=147 Identities=24% Similarity=0.210 Sum_probs=102.9
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCC-CCCCcccccccccccCCCCCCCCHHHHHHHHh
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQ-EDLPVHKSWRLNERHYGGLTGLDKAATAAKYG 80 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~-~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~ 80 (215)
+|..|.-||+..|+.|...++.+++|||||..||+|||..+.+.++. ..+.+.+++.|.|+..-.-.+.-
T Consensus 70 it~~g~~~~~~~gr~l~~a~~~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~--------- 140 (272)
T KOG3734|consen 70 ITVSGFIQCKLIGRELLNAGIAIDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKF--------- 140 (272)
T ss_pred ccchhHHHHHHHHHHHHhcCCCcceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCC---------
Confidence 68899999999999999999999999999999999999999999972 24577889999997321111100
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy11845 81 EEQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPY 160 (215)
Q Consensus 81 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~ 160 (215)
+.+.+..++......-| ..-++.| ...+..+||.+++.+|+...
T Consensus 141 ------------------------p~~is~~el~~~~~~VD-------~~y~P~~-----~~~~~~~es~e~~~~R~~~~ 184 (272)
T KOG3734|consen 141 ------------------------PFFISPDELKFPGFPVD-------LNYDPVY-----KETPRWGESLEDCNDRIQKV 184 (272)
T ss_pred ------------------------CCcCCHHHHhccCCCcc-------cccchhh-----hhcccccccHHHHHHHHHHH
Confidence 00111111111100000 0011221 12245689999999999999
Q ss_pred HHHhccccccCCCeEEEEeccHHHHHHHHHhcCCC
Q psy11845 161 WNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMS 195 (215)
Q Consensus 161 l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~ 195 (215)
+++ |+.. .++++||||+||.++....+.+.+.+
T Consensus 185 ~k~-i~~k-~~~~~lLIV~H~~sv~~~~~~l~~~~ 217 (272)
T KOG3734|consen 185 FKA-IADK-YPNENLLIVAHGSSVDTCSAQLQGLP 217 (272)
T ss_pred HHH-HHHh-cCCCceEEEeccchHHHHHHHhcCCC
Confidence 999 5544 46778999999999999999987744
No 31
>PRK06193 hypothetical protein; Provisional
Probab=99.56 E-value=6.6e-14 Score=113.32 Aligned_cols=118 Identities=15% Similarity=0.041 Sum_probs=84.9
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||++|++||+.+++.|+..+..++.|||||+.||+|||++++..... + .++++..
T Consensus 74 Lt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qTA~il~~~~~~---~----~~l~~~~------------------ 128 (206)
T PRK06193 74 LSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWETAQLAFGRHEK---E----IRLNFLN------------------ 128 (206)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhccccc---C----ccccccc------------------
Confidence 79999999999999999877889999999999999999998643211 1 1111110
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
...+..|+.+.+.+|+..++
T Consensus 129 ------------------------------------------------------------~~~~~~~~~~~y~~~l~~~I 148 (206)
T PRK06193 129 ------------------------------------------------------------SEPVPAERNALLKAGLRPLL 148 (206)
T ss_pred ------------------------------------------------------------ccCCChhhHHHHHHHHHHHH
Confidence 00123577888889999988
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCccccccccc-CCCCe
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNL-PTGIP 209 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~-~~~~~ 209 (215)
+. +. .+.++||||+|+..|+.+...+.+. .....-++. ++|++
T Consensus 149 ~~-l~---~~~~~vLlVgHnp~i~~l~g~~~~~-~g~~~~~~~~~~g~~ 192 (206)
T PRK06193 149 TT-PP---DPGTNTVLVGHDDNLEAATGIYPEP-EGEAAVFEPLGGEGF 192 (206)
T ss_pred hh-CC---CCCCeEEEEeCchHHHHHhCCCCcc-CccEEEEEeCCCCCc
Confidence 77 54 3567999999999999999987762 233333333 55543
No 32
>KOG0234|consensus
Probab=99.54 E-value=5.5e-14 Score=123.33 Aligned_cols=154 Identities=19% Similarity=0.111 Sum_probs=123.4
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccCCCCCCCCHHHHHHHHhH
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHYGGLTGLDKAATAAKYGE 81 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~g~~eg~~~~~~~~~~~~ 81 (215)
||++|.+=|+.+.+++..+...--.|+||++.||+|||..+ + . ...+.....|+|.+.|..+|++..++...+|+
T Consensus 264 ls~~g~~ya~~l~~f~~~~~~~dl~vwts~~~rti~ta~~l-~---~-~~~~~~~~~Ldei~ag~~~g~t~eeI~~~~p~ 338 (438)
T KOG0234|consen 264 LSERGSQYAKSLIKFVEEQSSSDLDVWTSQRKRTIQTAEGL-K---L-DYSVEQWKALDEIDAGVCEGLTYEEIETNYPE 338 (438)
T ss_pred ccHHHHHHHHHHHHHHhhhcccCceeccchHHHHhhhHhhc-C---c-chhhhhHhhcCcccccccccccHHHHHHhCch
Confidence 78999999999999998764333499999999999999943 2 1 11246678999999999999999999999987
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhccccccccccccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy11845 82 EQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIVDDPRYASEPSKEEFPMFESLKLTIERTLPYW 161 (215)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Es~~~~~~R~~~~l 161 (215)
+....- .| +..+..|++||+.|+..|+...+
T Consensus 339 e~~~r~-------------------------------------------~d------ky~yry~~gESy~D~v~RlePvI 369 (438)
T KOG0234|consen 339 EFALRD-------------------------------------------KD------KYRYRYPGGESYSDLVQRLEPVI 369 (438)
T ss_pred hhhhcc-------------------------------------------CC------cceeecCCCCCHHHHHHhhhhHh
Confidence 422100 01 12334589999999999999988
Q ss_pred HHhccccccCCCeEEEEeccHHHHHHHHHhcCCCcccccccccCCCCeEEEec
Q psy11845 162 NNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGLNLPTGIPFVTQC 214 (215)
Q Consensus 162 ~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
-. |.. ..+|+||||..+|+|++.++++.++.....+.+|-...+.+++
T Consensus 370 mE-lEr----~~~Vlvi~Hqavircll~Yf~~~~~~e~p~l~~plhtv~~l~~ 417 (438)
T KOG0234|consen 370 ME-LER----QENVLVITHQAVIRCLLAYFLNCSPVELPYLTVPLHTVIKLTP 417 (438)
T ss_pred Hh-hhh----cccEEEEecHHHHHHHHHHHhcCCHhhcccccccceeEEEEee
Confidence 77 542 3459999999999999999999999999999998888877764
No 33
>KOG4754|consensus
Probab=99.52 E-value=8.1e-14 Score=111.13 Aligned_cols=142 Identities=15% Similarity=0.093 Sum_probs=104.3
Q ss_pred CCchhHHHHHHHHHHHHHhcCCC--cCEEEEcCcHHHHHHHHHHHHhcCCC----CCCccccccc----ccc--cCCCCC
Q psy11845 1 MDDFDRVNEAEAAGVALAKAGFK--FDVAHTSVLTRAQNTLKAILKGIGQE----DLPVHKSWRL----NER--HYGGLT 68 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~~~~--~~~i~sSpl~Ra~qTA~~i~~~~~~~----~~~~~~~~~l----~E~--~~g~~e 68 (215)
.||+.|++|+..+++.+.+.++. ++.|+||||.||.||+.+.+.....+ .+|+.+.+.+ +|- ++....
T Consensus 47 ~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~~~~~e~g~~~~p~~vsp~~i~~~rE~lG~hpCD~ 126 (248)
T KOG4754|consen 47 HLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFGGYLAEDGEDPAPVKVSPPFIAVCRETLGDHPCDR 126 (248)
T ss_pred ccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhcceeccCCCcCCceeecchHHHHHHHHhCCCcccc
Confidence 48999999999999999777666 99999999999999999998877432 3566667777 662 344444
Q ss_pred CCCHHHHHHHHhHHHHHHHhhcCCCCCCCCCCCCCCCCchhHHHHHHHHhcccccccccccc--CCCCCCCCCCCCCCCC
Q psy11845 69 GLDKAATAAKYGEEQVLIWRRSFDIPPPAMEKDHTSGDCRNYEKLVMAKQNKKDHAYYSNIV--DDPRYASEPSKEEFPM 146 (215)
Q Consensus 69 g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~ 146 (215)
+.+.+...+.+|.-. |+.+- .++.| .+.+
T Consensus 127 r~~v~~~~~lfp~~D------------------------------------------Fs~~~~dv~~~~-------~pdy 157 (248)
T KOG4754|consen 127 RSSVTDLMKLFPAYD------------------------------------------FSLCETDVDPLK-------KPDY 157 (248)
T ss_pred cchhHHHHhhccccc------------------------------------------ceeeccCcchhc-------cCcc
Confidence 555555555554310 11111 12233 3467
Q ss_pred CCCHHHHHHHHHHHHHHhccccccCCCeEEEEeccHHHHHHHHHhcCC
Q psy11845 147 FESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNM 194 (215)
Q Consensus 147 ~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~ 194 (215)
.|+.++...|-..+++. +..+ ..+.|.||||+++|+.++..+...
T Consensus 158 ~ed~e~~a~r~re~~~~-l~~r--~ek~iavvths~fl~~llk~i~k~ 202 (248)
T KOG4754|consen 158 REDDEESAARSREFLEW-LAKR--PEKEIAVVTHSGFLRSLLKKIQKD 202 (248)
T ss_pred hhhHHHHHHhHHHHHHH-HHhC--ccceEEEEEehHHHHHHHHHhccc
Confidence 89999999999998888 7664 567899999999999999888753
No 34
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.52 E-value=1.2e-13 Score=107.53 Aligned_cols=46 Identities=26% Similarity=0.221 Sum_probs=44.7
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcC
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIG 47 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~ 47 (215)
||++|+.+|..+|++|++.+..+|.|+|||+.||+|||+.+.+.++
T Consensus 26 Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~ 71 (163)
T COG2062 26 LTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLG 71 (163)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhC
Confidence 8999999999999999999999999999999999999999999986
No 35
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.47 E-value=7e-13 Score=106.66 Aligned_cols=57 Identities=14% Similarity=-0.001 Sum_probs=47.0
Q ss_pred CchhHHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHhcCCCCCCcccccccccccC
Q psy11845 2 DDFDRVNEAEAAGVALAKAGFKFDVAHTSVLTRAQNTLKAILKGIGQEDLPVHKSWRLNERHY 64 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~l~E~~~ 64 (215)
||++|++||+.+|++|+... ..+.|||||+.||+|||+++.+. .++..+++|+|.+.
T Consensus 80 LTerG~~qA~~lg~~L~~~~-~~d~I~sSpa~Ra~qTAe~ia~~-----~~v~~~~~Lye~~~ 136 (201)
T PRK15416 80 ITVKGTQDARELGKAFSADI-PDYDLYSSNTVRTIQSATWFSAG-----KKLTVDKRLSDCGN 136 (201)
T ss_pred CCHHHHHHHHHHHHHHhCCC-CCCEEEECCCHHHHHHHHHHhcC-----CCcEecHHHhhcCc
Confidence 79999999999999998643 33899999999999999999762 36677777777654
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.68 E-value=0.0017 Score=53.53 Aligned_cols=48 Identities=15% Similarity=-0.094 Sum_probs=40.3
Q ss_pred CCchhHHHHHHHHHHHHHhcC----------CCcCEEEEcCcHHHHHHHHHHHHhcCC
Q psy11845 1 MDDFDRVNEAEAAGVALAKAG----------FKFDVAHTSVLTRAQNTLKAILKGIGQ 48 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~~----------~~~~~i~sSpl~Ra~qTA~~i~~~~~~ 48 (215)
.||..|++|+..+|++|+..- ...-.+++|+..||++||+.++.++-.
T Consensus 18 ~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl~~ 75 (242)
T cd07061 18 ELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGLFP 75 (242)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHhcCC
Confidence 489999999999999997631 123379999999999999999999854
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=95.62 E-value=0.023 Score=48.52 Aligned_cols=47 Identities=15% Similarity=0.146 Sum_probs=39.6
Q ss_pred CCchhHHHHHHHHHHHHHhc--CC-------CcCEEEEcCcHHHHHHHHHHHHhcC
Q psy11845 1 MDDFDRVNEAEAAGVALAKA--GF-------KFDVAHTSVLTRAQNTLKAILKGIG 47 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~--~~-------~~~~i~sSpl~Ra~qTA~~i~~~~~ 47 (215)
.||+.|.+|...+|++|+.. ++ .--.|+||...||++||+.++.++-
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 38999999999999999874 11 1235999999999999999999885
No 38
>KOG3720|consensus
Probab=94.40 E-value=0.075 Score=47.71 Aligned_cols=48 Identities=13% Similarity=-0.018 Sum_probs=39.7
Q ss_pred CCchhHHHHHHHHHHHHHh---cCCC-------c--CEEEEcCcHHHHHHHHHHHHhcCC
Q psy11845 1 MDDFDRVNEAEAAGVALAK---AGFK-------F--DVAHTSVLTRAQNTLKAILKGIGQ 48 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~---~~~~-------~--~~i~sSpl~Ra~qTA~~i~~~~~~ 48 (215)
.||+.|.+|+.+||++|+. ...+ . -.|.||+.-||+.||+.++.++-.
T Consensus 70 qLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRtl~SAqs~laGlfp 129 (411)
T KOG3720|consen 70 QLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRTLMSAQSVLAGLFP 129 (411)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHHHHHHHHHHHhhCC
Confidence 4899999999999999988 3211 1 158899999999999999998843
No 39
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=91.89 E-value=0.52 Score=42.62 Aligned_cols=53 Identities=17% Similarity=0.023 Sum_probs=39.2
Q ss_pred CCchhHHHHHHHHHHHHHhcC----C-------Cc--CEEEEcCcHHHHHHHHHHHHhcCC-CCCCc
Q psy11845 1 MDDFDRVNEAEAAGVALAKAG----F-------KF--DVAHTSVLTRAQNTLKAILKGIGQ-EDLPV 53 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~~----~-------~~--~~i~sSpl~Ra~qTA~~i~~~~~~-~~~~~ 53 (215)
.||.+|..|-..+|++++..- + .. -.|++++..|++.||+.++.++-. .++++
T Consensus 72 qLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~GlyP~c~i~v 138 (436)
T PRK10172 72 WLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGLAPDCAITV 138 (436)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhcCCCCCCcc
Confidence 489999999999999886631 1 11 157788889999999999887732 24554
No 40
>KOG1057|consensus
Probab=90.03 E-value=0.51 Score=45.16 Aligned_cols=46 Identities=22% Similarity=-0.034 Sum_probs=38.7
Q ss_pred CCchhHHHHHHHHHHHHHhcCC---------------CcCEEEEcCcHHHHHHHHHHHHhc
Q psy11845 1 MDDFDRVNEAEAAGVALAKAGF---------------KFDVAHTSVLTRAQNTLKAILKGI 46 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~~~---------------~~~~i~sSpl~Ra~qTA~~i~~~~ 46 (215)
+||.-|+-||.+||+.+...-. .--.||+|+-.|-+-||+.+++++
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 4899999999999999976311 123699999999999999999987
No 41
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=88.91 E-value=1.2 Score=40.20 Aligned_cols=47 Identities=15% Similarity=-0.023 Sum_probs=36.9
Q ss_pred CCchhHHHHHHHHHHHHHhc----CC-------C--cCEEEEcCcHHHHHHHHHHHHhcC
Q psy11845 1 MDDFDRVNEAEAAGVALAKA----GF-------K--FDVAHTSVLTRAQNTLKAILKGIG 47 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~----~~-------~--~~~i~sSpl~Ra~qTA~~i~~~~~ 47 (215)
.||.+|..+-..+|++++.. +. . .-.|++++..|+++||+.++.++-
T Consensus 70 ~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~~~~RT~~Sa~afl~Gl~ 129 (413)
T PRK10173 70 QLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYANSLQRTVATAQFFITGAF 129 (413)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeCCchHHHHHHHHHHHhcC
Confidence 48999999999999877552 11 1 135889999999999999988773
No 42
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
Probab=46.72 E-value=82 Score=27.44 Aligned_cols=51 Identities=16% Similarity=0.176 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhccccccCCCeEEEEeccHHHHHHHHHhcCCCccccccc
Q psy11845 151 KLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLDNMSDEAIMGL 202 (215)
Q Consensus 151 ~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~~~~~~~ 202 (215)
....+++..+-...|.....+++ |+-|++|.++.+++.++.-.+...+...
T Consensus 94 ~~~~~~lg~aaA~~l~~~l~~gd-vigV~wGrTv~a~~~~l~~~~~~~~~vV 144 (321)
T COG2390 94 DSILRRLGRAAAQYLESLLKPGD-VIGVGWGRTLSAVVDNLPPAPLRDVKVV 144 (321)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC-EEEEeccHHHHHHHHhcCcCccCCeEEE
Confidence 33344344444443333334554 9999999999999999876654444333
No 43
>KOG3672|consensus
Probab=44.60 E-value=45 Score=29.94 Aligned_cols=79 Identities=13% Similarity=-0.029 Sum_probs=48.1
Q ss_pred CCchhHHHHHHHHHHHHHhc----CCC-------cC--EEEEcCcHHHHHHHHHHHHhcCCC--CCCccc-ccccccccC
Q psy11845 1 MDDFDRVNEAEAAGVALAKA----GFK-------FD--VAHTSVLTRAQNTLKAILKGIGQE--DLPVHK-SWRLNERHY 64 (215)
Q Consensus 1 ~~T~~G~~QA~~lg~~L~~~----~~~-------~~--~i~sSpl~Ra~qTA~~i~~~~~~~--~~~~~~-~~~l~E~~~ 64 (215)
|||..|.-|--.+|+.+... ..+ .+ .|+|+-..|+.|+|-.++=.+-+. ..++.+ .....=+++
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~~lp~~~w~~i~iR~s~s~~fC~ 247 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLFLYLPRTFWAPIQIRASNSSYFCI 247 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHHHhcchhhhheeeeecCcccceec
Confidence 79999999999999988652 111 22 499999999999998774433210 122221 112222355
Q ss_pred CCCCCCCHHHHHHHH
Q psy11845 65 GGLTGLDKAATAAKY 79 (215)
Q Consensus 65 g~~eg~~~~~~~~~~ 79 (215)
|.....-...+.+.+
T Consensus 248 g~C~Cp~~~~~r~~~ 262 (487)
T KOG3672|consen 248 GQCACPIHKSIRRIY 262 (487)
T ss_pred ccccchHHHHHHHHH
Confidence 665554445555444
No 44
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=43.20 E-value=17 Score=30.68 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=25.3
Q ss_pred CCCCHHHHHHHHHHHHHHhccccccCCCeEEEEeccHHHHHH
Q psy11845 146 MFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGI 187 (215)
Q Consensus 146 ~~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~l 187 (215)
...|.++..+++.+.+.. .. .-+.+|++.+||++|..-
T Consensus 190 ~~~sl~~a~~~~~~i~~a-a~---~v~~dii~l~hGGPI~~p 227 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDA-AR---AVNPDIIVLCHGGPIATP 227 (268)
T ss_dssp -S--HHHHHHHHHHHHHH-HH---CC-TT-EEEEECTTB-SH
T ss_pred ccCCHHHHHHHHHHHHHH-HH---HhCCCeEEEEeCCCCCCH
Confidence 478999999999996666 32 245788999999998753
No 45
>KOG1382|consensus
Probab=43.03 E-value=62 Score=29.58 Aligned_cols=47 Identities=11% Similarity=-0.069 Sum_probs=36.9
Q ss_pred CchhHHHHHHHHHHHHHhc---CCC--cCEEEEcCcHHHHHHHHHHHHhcCC
Q psy11845 2 DDFDRVNEAEAAGVALAKA---GFK--FDVAHTSVLTRAQNTLKAILKGIGQ 48 (215)
Q Consensus 2 ~T~~G~~QA~~lg~~L~~~---~~~--~~~i~sSpl~Ra~qTA~~i~~~~~~ 48 (215)
+...|+..|..+++.+-+. ... .-.|+++-..||.+||+.++.++.+
T Consensus 133 l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLfg 184 (467)
T KOG1382|consen 133 LEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLFG 184 (467)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhcc
Confidence 4567889999999877543 122 3368999999999999999999974
No 46
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=42.42 E-value=57 Score=28.07 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHHh---ccccccCCCeEEEEeccHHHHHHHHHhcCCCc
Q psy11845 148 ESLKLTIERTLPYWNNV---IVPQLKEGKKILIAAHGNSLRGIVKHLDNMSD 196 (215)
Q Consensus 148 Es~~~~~~R~~~~l~~~---i~~~~~~~~~VliVsHg~~i~~l~~~l~~~~~ 196 (215)
|......+|+...+... +.+ ..+.+|+||+||..-..++.++-....
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~--~~~~~ivlIg~G~gA~~~~~~la~~~~ 216 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ--QGGKNIVLIGHGTGAGWAARYLAEKPP 216 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh--cCCceEEEEEeChhHHHHHHHHhcCCC
Confidence 34444555555444442 222 345679999999999999999876543
No 47
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=37.91 E-value=27 Score=29.72 Aligned_cols=30 Identities=7% Similarity=0.223 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhccccccCCCeEEEEeccHHHH
Q psy11845 152 LTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLR 185 (215)
Q Consensus 152 ~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~ 185 (215)
+...++...+.. |. ..+..|++||||++-.
T Consensus 31 ~~l~~l~~~i~~-l~---~~g~~vilVssGAv~~ 60 (284)
T cd04256 31 GRLASIVEQVSE-LQ---SQGREVILVTSGAVAF 60 (284)
T ss_pred HHHHHHHHHHHH-HH---HCCCEEEEEeeCcHHh
Confidence 444444444444 32 3578999999998754
No 48
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=33.98 E-value=1.8e+02 Score=24.25 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=27.6
Q ss_pred CeEEEEeccHHHHHHHHHhcCCCccccc--ccccCCCCeEEEec
Q psy11845 173 KKILIAAHGNSLRGIVKHLDNMSDEAIM--GLNLPTGIPFVTQC 214 (215)
Q Consensus 173 ~~VliVsHg~~i~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~ 214 (215)
+-++.++|-.+|..++..| ++...... ..-.|.|..++||+
T Consensus 290 k~~~~s~HD~tl~~ll~~L-gl~~~~~~~~~~~pp~as~l~fEl 332 (347)
T PF00328_consen 290 KLVLYSGHDTTLMPLLSAL-GLDNYSPPYQSYWPPYASNLVFEL 332 (347)
T ss_dssp SEEEEEE-HHHHHHHHHHT-TCTTTSTTTHSSCSSTT-EEEEEE
T ss_pred eEEEEecCHHHHHHHHHHh-CCCccCccccCCCCCccceeEEEE
Confidence 4578889999999998887 54442221 23458899999885
No 49
>PRK04946 hypothetical protein; Provisional
Probab=33.38 E-value=1.8e+02 Score=23.09 Aligned_cols=44 Identities=11% Similarity=-0.131 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHHHHHhccccccCCCeEEEEecc---HHHHHHHHHhcCC
Q psy11845 147 FESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHG---NSLRGIVKHLDNM 194 (215)
Q Consensus 147 ~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg---~~i~~l~~~l~~~ 194 (215)
|-+.++..+.+..++.... ..+-..+.|-|| ++++..+..++..
T Consensus 102 G~~~eeA~~~L~~fl~~a~----~~g~r~v~IIHGkG~gvLk~~V~~wL~q 148 (181)
T PRK04946 102 GLTQLQAKQELGALIAACR----KEHVFCACVMHGHGKHILKQQTPLWLAQ 148 (181)
T ss_pred CCCHHHHHHHHHHHHHHHH----HcCCCEEEEEcCCCHhHHHHHHHHHHcC
Confidence 7889999999999888722 345666788888 8999999888853
No 50
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=32.67 E-value=34 Score=28.73 Aligned_cols=14 Identities=21% Similarity=0.648 Sum_probs=10.5
Q ss_pred cCCCeEEEEeccHH
Q psy11845 170 KEGKKILIAAHGNS 183 (215)
Q Consensus 170 ~~~~~VliVsHg~~ 183 (215)
..+..|+||+||+.
T Consensus 45 ~~g~~vvlV~Sga~ 58 (266)
T PRK12314 45 NKGKEVILVSSGAI 58 (266)
T ss_pred HCCCeEEEEeeCcc
Confidence 45677999999844
No 51
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=32.42 E-value=39 Score=26.85 Aligned_cols=33 Identities=18% Similarity=0.037 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHHhccccccCCCeEEEEeccH
Q psy11845 148 ESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGN 182 (215)
Q Consensus 148 Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~ 182 (215)
-+.+++.+|+..+++. |++. .++..|++|+|-.
T Consensus 71 ~~~~~~~~~~~~fv~~-iR~~-hP~tPIllv~~~~ 103 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKT-IREA-HPDTPILLVSPIP 103 (178)
T ss_dssp CCTTTHHHHHHHHHHH-HHTT--SSS-EEEEE---
T ss_pred CCHHHHHHHHHHHHHH-HHHh-CCCCCEEEEecCC
Confidence 4677999999999988 7765 4567899999643
No 52
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=30.33 E-value=51 Score=27.81 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=19.8
Q ss_pred CCCCHHHHHHHHHHHHHHhccccccCCCeEEEEeccHH
Q psy11845 146 MFESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNS 183 (215)
Q Consensus 146 ~~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~ 183 (215)
+.++..+-++++...+.. .......++-+|+++||..
T Consensus 116 g~~~~~~D~~~va~aL~~-~~~~~~~~~a~vlmGHGt~ 152 (262)
T PF06180_consen 116 GQENSPEDYEAVAEALAE-EFPKKRKDEAVVLMGHGTP 152 (262)
T ss_dssp ----SHHHHHHHHHHHHC-CS-TT-TTEEEEEEE---S
T ss_pred cccCChHHHHHHHHHHHH-hccccCCCCEEEEEeCCCC
Confidence 344556666777777777 3332246788999999974
No 53
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=30.25 E-value=65 Score=26.80 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHHHHHHhccccccCCCeEEEEeccHHHHH
Q psy11845 147 FESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRG 186 (215)
Q Consensus 147 ~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~ 186 (215)
-.|++|..+|+...+.. + ..++..++|||+++...
T Consensus 126 i~s~~eA~~~ive~~~~-~----~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 126 VISLEESAQRIIAAAKK-A----PPDLPLILLAHNGPSGL 160 (238)
T ss_pred CCCHHHHHHHHHHHhhh-c----CCCCCeEEEeCcCCcCC
Confidence 56888888888886643 2 35567899999998654
No 54
>KOG2728|consensus
Probab=27.76 E-value=55 Score=27.59 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=19.4
Q ss_pred CCCHHHHHHHHHHHHHHhccccccCCCeEEEEeccHHH
Q psy11845 147 FESLKLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSL 184 (215)
Q Consensus 147 ~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i 184 (215)
.|+.+|...-+..+++. -. ...+.+|++||.||+.
T Consensus 8 p~~~~d~~s~~~eFi~~-q~--s~~~rrIVlVTSGGTt 42 (302)
T KOG2728|consen 8 PESLDDPGSLIEEFIKL-QA--SLQGRRIVLVTSGGTT 42 (302)
T ss_pred cccccchhHHHHHHHHH-Hh--hccCceEEEEecCCeE
Confidence 34445444444443333 11 1244679999999974
No 55
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=27.54 E-value=1.3e+02 Score=21.70 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=28.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccccccCCCeEEEEe--c-cHHHHHHHHHhcC
Q psy11845 144 FPMFESLKLTIERTLPYWNNVIVPQLKEGKKILIAA--H-GNSLRGIVKHLDN 193 (215)
Q Consensus 144 ~~~~Es~~~~~~R~~~~l~~~i~~~~~~~~~VliVs--H-g~~i~~l~~~l~~ 193 (215)
+..+++.+++.+|+.+.+.+ + .+++.|+|+| - |.+-..+...+.+
T Consensus 35 ~~~~~~~~~~~~~l~~~i~~-~----~~~~~vivltDl~GGSp~n~a~~~~~~ 82 (116)
T TIGR00824 35 FVPGENAETLQEKYNAALAD-L----DTEEEVLFLVDIFGGSPYNAAARIIVD 82 (116)
T ss_pred cCCCcCHHHHHHHHHHHHHh-c----CCCCCEEEEEeCCCCCHHHHHHHHHhh
Confidence 45689999999999998877 4 3445666665 2 4444444444433
No 56
>PF13422 DUF4110: Domain of unknown function (DUF4110)
Probab=26.67 E-value=89 Score=22.17 Aligned_cols=26 Identities=31% Similarity=0.450 Sum_probs=21.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhcccc
Q psy11845 143 EFPMFESLKLTIERTLPYWNNVIVPQ 168 (215)
Q Consensus 143 ~~~~~Es~~~~~~R~~~~l~~~i~~~ 168 (215)
.+-.+||+.+|+.|....|..++...
T Consensus 11 tP~p~EsLr~Ff~RT~~~W~~~a~~~ 36 (96)
T PF13422_consen 11 TPKPFESLRDFFARTSEYWQEWAIES 36 (96)
T ss_pred CCCCCCcHHHHHHHhHHHHHHHHHHc
Confidence 34469999999999999999966543
No 57
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=25.36 E-value=1.2e+02 Score=25.13 Aligned_cols=38 Identities=18% Similarity=0.290 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhccccccCCCeEEEEeccHHHHHHHHHhc
Q psy11845 152 LTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLD 192 (215)
Q Consensus 152 ~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~ 192 (215)
+-.+.+...+.+ +.+ ..+.+|++|||...+.....+..
T Consensus 176 ~t~~~V~~ll~~-~~~--~~g~tii~VTHd~~lA~~~dr~i 213 (226)
T COG1136 176 KTAKEVLELLRE-LNK--ERGKTIIMVTHDPELAKYADRVI 213 (226)
T ss_pred HHHHHHHHHHHH-HHH--hcCCEEEEEcCCHHHHHhCCEEE
Confidence 344455554444 432 24789999999999887665543
No 58
>COG1416 Uncharacterized conserved protein [Function unknown]
Probab=25.14 E-value=1.8e+02 Score=21.30 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhccccccCCCeEEEEeccHHHHHHHHHhc
Q psy11845 151 KLTIERTLPYWNNVIVPQLKEGKKILIAAHGNSLRGIVKHLD 192 (215)
Q Consensus 151 ~~~~~R~~~~l~~~i~~~~~~~~~VliVsHg~~i~~l~~~l~ 192 (215)
.+-...+...+.. +.+. .+...|.+|.||..|..|.....
T Consensus 13 ~~k~~~~l~Nl~N-ll~~-~p~~~IeVV~~g~ai~~l~~~~~ 52 (112)
T COG1416 13 ESKVNMVLGNLTN-LLED-DPSVEIEVVAHGPAIAFLSEKAN 52 (112)
T ss_pred HHHHHHHHHHHHH-HhcC-CCCceEEEEEeCchhHHhhhhcc
Confidence 3444444444555 2222 35678999999999998876543
No 59
>PLN03034 phosphoglycerate kinase; Provisional
Probab=25.09 E-value=1.6e+02 Score=27.26 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=16.2
Q ss_pred HHHHHHHHHhccccccCCCeEEEEeccH
Q psy11845 155 ERTLPYWNNVIVPQLKEGKKILIAAHGN 182 (215)
Q Consensus 155 ~R~~~~l~~~i~~~~~~~~~VliVsHg~ 182 (215)
.|+++.+-. |......+-.|+|+||-+
T Consensus 115 ~RI~a~lpT-I~~L~~~gakvVl~SHlG 141 (481)
T PLN03034 115 TRIRAAIPT-IKYLISNGAKVILSSHLG 141 (481)
T ss_pred HhHHHHHHH-HHHHHHCCCeEEEEEecC
Confidence 344444433 333334667899999987
No 60
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=24.44 E-value=75 Score=23.02 Aligned_cols=17 Identities=35% Similarity=0.653 Sum_probs=12.7
Q ss_pred eEEEEeccHHHHHHHHH
Q psy11845 174 KILIAAHGNSLRGIVKH 190 (215)
Q Consensus 174 ~VliVsHg~~i~~l~~~ 190 (215)
.++|+|||.+-..+...
T Consensus 2 ~ili~sHG~~A~gi~~~ 18 (122)
T cd00006 2 GIIIATHGGFASGLLNS 18 (122)
T ss_pred eEEEEcCHHHHHHHHHH
Confidence 48999999776666544
No 61
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=23.19 E-value=1.2e+02 Score=23.91 Aligned_cols=23 Identities=26% Similarity=0.153 Sum_probs=17.0
Q ss_pred HHHHHHHHHhcCCCcCEEEEcCc
Q psy11845 10 AEAAGVALAKAGFKFDVAHTSVL 32 (215)
Q Consensus 10 A~~lg~~L~~~~~~~~~i~sSpl 32 (215)
+..++..|+++|+.||.|+..+-
T Consensus 53 v~~a~~~L~~~Gf~PDvI~~H~G 75 (171)
T PF12000_consen 53 VARAARQLRAQGFVPDVIIAHPG 75 (171)
T ss_pred HHHHHHHHHHcCCCCCEEEEcCC
Confidence 33455677778999999998764
No 62
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=21.11 E-value=1.2e+02 Score=22.55 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=10.6
Q ss_pred eEEEEecc-HHHHHHHHH
Q psy11845 174 KILIAAHG-NSLRGIVKH 190 (215)
Q Consensus 174 ~VliVsHg-~~i~~l~~~ 190 (215)
-|+||||| ..-..+...
T Consensus 3 GIVlVSHs~~lA~gl~~~ 20 (124)
T PRK14484 3 GIVIVSHSKKIAEGVKDL 20 (124)
T ss_pred eEEEEeCcHHHHHHHHHH
Confidence 47899999 444444433
No 63
>PLN02282 phosphoglycerate kinase
Probab=21.10 E-value=2.2e+02 Score=25.65 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=15.8
Q ss_pred HHHHHHHHHhccccccCCCeEEEEeccH
Q psy11845 155 ERTLPYWNNVIVPQLKEGKKILIAAHGN 182 (215)
Q Consensus 155 ~R~~~~l~~~i~~~~~~~~~VliVsHg~ 182 (215)
.|+.+.+-. |......+..|+++||-+
T Consensus 40 ~RI~a~lpT-I~~l~~~gakvVl~SHlG 66 (401)
T PLN02282 40 TRIRAAVPT-IKYLMGHGARVILCSHLG 66 (401)
T ss_pred HHHHHHHHH-HHHHHHCCCeEEEEecCC
Confidence 344444433 333334567899999976
No 64
>TIGR02689 ars_reduc_gluta arsenate reductase, glutathione/glutaredoxin type. Members of this protein family represent a novel form of arsenate reductase, using glutathione and glutaredoxin rather than thioredoxin for reducing equivalents as do some homologous arsenate reductases. An example of this type is Synechocystis sp. strain PCC 6803 slr0946, and of latter type (excluded from this model) is Staphylococcus aureus plasmid pI258 ArsC. Both are among the subset of arsenate reductases that belong the the low-molecular-weight protein-tyrosine phosphatase superfamily.
Probab=20.20 E-value=94 Score=22.67 Aligned_cols=18 Identities=28% Similarity=0.423 Sum_probs=14.5
Q ss_pred CeEEEEeccHHHHHHHHH
Q psy11845 173 KKILIAAHGNSLRGIVKH 190 (215)
Q Consensus 173 ~~VliVsHg~~i~~l~~~ 190 (215)
.+||+||+|++.|+-+..
T Consensus 1 ~~vlfvC~~N~cRS~mAE 18 (126)
T TIGR02689 1 KKVMFVCKRNSCRSQMAE 18 (126)
T ss_pred CeEEEEcCCcHHHHHHHH
Confidence 379999999999885544
Done!