RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11849
         (94 letters)



>d2gp4a2 d.334.1.1 (A:1-418) 6-phosphogluconate dehydratase EDD
           {Shewanella oneidensis [TaxId: 70863]}
          Length = 418

 Score = 24.7 bits (53), Expect = 2.6
 Identities = 4/43 (9%), Positives = 9/43 (20%)

Query: 6   MVSAMGPEYQKYLWWKRHLTTLQLLQFTLVFFHSAQVLIFDCG 48
                G    +     R +  +              +L+  C 
Sbjct: 113 DGVTQGQPGMELSLLSREVIAMATAVGLSHNMFDGALLLGICD 155


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.338    0.147    0.513 

Gapped
Lambda     K      H
   0.267   0.0530    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 367,586
Number of extensions: 13919
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 94
Length of database: 2,407,596
Length adjustment: 57
Effective length of query: 37
Effective length of database: 1,624,986
Effective search space: 60124482
Effective search space used: 60124482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 47 (22.3 bits)