BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11854
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38942|CAT2_CLOK5 4-hydroxybutyrate coenzyme A transferase OS=Clostridium kluyveri
(strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=cat2 PE=3
SV=3
Length = 429
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 34/46 (73%)
Query: 87 AGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDHREAL 132
A V T+R V YVVTE+G+A L GKTLR RA ALINIA P RE+L
Sbjct: 376 AAVTTSRNEVDYVVTEYGVAHLKGKTLRNRARALINIAHPKFRESL 421
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 7 IATAQVNKYMPRTFGDALVHQSHFDFACQVDGSLPLHPSKPPSPNEV--AIG 56
+ A+VNK MPRT GD+ +H S D+ V+ S PL +PP +V AIG
Sbjct: 150 LVIAEVNKNMPRTLGDSFIHVSDIDYI--VEASHPLLELQPPKLGDVEKAIG 199
>sp|Q07048|RDRP_SCV23 RNA-directed RNA polymerase OS=Saccharomyces 23S RNA narnavirus
PE=1 SV=2
Length = 941
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Query: 38 GSLPLHPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVH 97
G P PS P E+A G RA + G ++L R VV R
Sbjct: 273 GYDPAAPSADPDDLELAKERGFSRIRASWYSTFRYRGELKSTNQSLEARVAVVPERGFKA 332
Query: 98 YVVTEHGIAFL-FGKTLRQ-------RAHALINIAPPDHREALE 133
+VT H + + FG R+ R AL+++ DHR A+E
Sbjct: 333 RIVTTHSASRVTFGHQFRRYLLQGIRRHPALVDVIGGDHRRAVE 376
>sp|Q9CZJ2|HS12B_MOUSE Heat shock 70 kDa protein 12B OS=Mus musculus GN=Hspa12b PE=1 SV=1
Length = 685
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 38 GSLPLHPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGK------TLRQ----RA 87
G PL PS+ P P A+ + + + T G AF F +R+
Sbjct: 37 GIAPLTPSQSPKPEARALQQASFSVVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDP 96
Query: 88 GVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFERLK 141
GV + ++T GI FG T R H L D EA + FE+ K
Sbjct: 97 GVAHQKTPTCLLLTPEGIFHSFGYTARDYYHDL------DPEEARDWLYFEKFK 144
>sp|Q9HNM7|NADE_HALSA NH(3)-dependent NAD(+) synthetase OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=nadE PE=3
SV=1
Length = 268
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 51 NEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFG 110
+EVA+G TRA ++Y V HG + G R A + V + I L+
Sbjct: 119 DEVAVGNARARTRAVINYFVANHGDGVVLGTGNRAEAMTGYYTKYGDQAVDCNPIGNLYK 178
Query: 111 KTLRQRAHAL 120
+RQ A L
Sbjct: 179 MQVRQLARDL 188
>sp|B0R6W9|NADE_HALS3 NH(3)-dependent NAD(+) synthetase OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=nadE PE=3 SV=1
Length = 268
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 51 NEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFG 110
+EVA+G TRA ++Y V HG + G R A + V + I L+
Sbjct: 119 DEVAVGNARARTRAVINYFVANHGDGVVLGTGNRAEAMTGYYTKYGDQAVDCNPIGNLYK 178
Query: 111 KTLRQRAHAL 120
+RQ A L
Sbjct: 179 MQVRQLARDL 188
>sp|P10648|GSTA2_MOUSE Glutathione S-transferase A2 OS=Mus musculus GN=Gsta2 PE=1 SV=3
Length = 222
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 56 GAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQ 115
G +V TRA ++Y+ T++ L+GK +++RA ++ +TE + G+ +
Sbjct: 62 GMKLVQTRAILNYIATKYD---LYGKDMKERA-LIDMYTEGILDLTE-----MIGQLV-- 110
Query: 116 RAHALINIAPPDHREALEKAAFERLK 141
+ PPD REA A +R K
Sbjct: 111 -------LCPPDQREAKTALAKDRTK 129
>sp|Q971K4|GLYA_SULTO Serine hydroxymethyltransferase OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=glyA PE=3 SV=1
Length = 433
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 38 GSLPL--HPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAH 95
GSL L HP K +P+ A+GA VV AHV+ ++T + L + A ++T+ H
Sbjct: 172 GSLYLFPHPVKELAPHAHAVGAKVVYDAAHVYGLITGKA----WHNPLEEGADIMTSSTH 227
Query: 96 VHYVVTEHGIAF 107
+ + G F
Sbjct: 228 KTFPGPQGGAVF 239
>sp|P38946|CAT1_CLOK5 Succinyl-CoA:coenzyme A transferase OS=Clostridium kluyveri (strain
ATCC 8527 / DSM 555 / NCIMB 10680) GN=cat1 PE=2 SV=1
Length = 538
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 92 TRAHVHYVVTEHGIAFLFGKTLRQRAHALI-NIAPPDHREAL 132
T V +VTE G+A L G + R++A A+I N PD+++ L
Sbjct: 461 TEHDVMVIVTEQGVADLRGLSPREKAVAIIENCVHPDYKDML 502
>sp|Q6C3Z9|ACH1_YARLI Acetyl-CoA hydrolase OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=ACH1 PE=3 SV=1
Length = 524
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 92 TRAHVHYVVTEHGIAFLFGKTLRQRAHALIN-IAPPDHREAL----EKAAFE 138
T + VVTE G+A L G + ++R+ +IN A P +R+ L E+A FE
Sbjct: 439 TEHDLDIVVTEQGLADLRGLSPKERSREMINKCAHPSYRDQLLAYVEQAEFE 490
>sp|P64381|HISZ_STAAW ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain MW2) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|Q6G5Z5|HISZ_STAAS ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain MSSA476) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|P64380|HISZ_STAAN ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain N315) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|P64379|HISZ_STAAM ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|A6U565|HISZ_STAA2 ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain JH1) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|A7X771|HISZ_STAA1 ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain Mu3 / ATCC 700698) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|Q6GDC4|HISZ_STAAR ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain MRSA252) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|A8Z5I0|HISZ_STAAT ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|A6QKG8|HISZ_STAAE ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain Newman) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|Q5HCL7|HISZ_STAAC ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain COL) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|Q2FUT6|HISZ_STAA8 ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain NCTC 8325) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|Q2FDI1|HISZ_STAA3 ATP phosphoribosyltransferase regulatory subunit OS=Staphylococcus
aureus (strain USA300) GN=hisZ PE=3 SV=1
Length = 272
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 63 RAHVHYVVTEHG--IAFLFGKTL-----------RQRAGVVTTRAHVHYVVTEHGIAFLF 109
R +VH+VV H + L K+L R +G+VT Y+ TEH I +
Sbjct: 131 RDNVHFVVLGHYQLLDALLDKSLQTPDILSMIEERNLSGLVT------YLSTEHPIVQIL 184
Query: 110 GKTLRQRAHALINIAPPDHREALEKAAFER 139
+ +Q+ + L + P DH +E +ER
Sbjct: 185 KENTQQQLNVLEHYIPNDHPALVELKIWER 214
>sp|Q2FTM0|Y2548_METHJ Putative HTH-type transcriptional regulatory protein Mhun_2548
OS=Methanospirillum hungatei (strain JF-1 / DSM 864)
GN=Mhun_2548 PE=3 SV=1
Length = 306
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 25/106 (23%)
Query: 44 PSKPPSPNEVAIGAGVVTTRAHV----------------HYVVTEHGIAFLFGKTLRQRA 87
P P P E+ I A + HV H ++T +G A + + +RA
Sbjct: 198 PEMPEVPEEIPIQAAIEEMGMHVQPMYHAPFQALVRYDSHTILTGYGSA----QKVARRA 253
Query: 88 GVV-----TTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDH 128
G++ TR H V+T+ G+TL +L+++ PD
Sbjct: 254 GIIGNISQVTRTHAMCVMTDDQRQRRIGRTLMIGEDSLLSLDEPDD 299
>sp|Q8FL00|TILS_ECOL6 tRNA(Ile)-lysidine synthase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=tilS PE=3 SV=1
Length = 437
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 77 FLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQ 115
+G+TL AGV T+ V V E+G++F++ KTL Q
Sbjct: 397 LFYGETLIAAAGVFVTQEGV--AVGENGVSFVWQKTLSQ 433
>sp|Q08863|GSTA1_RABIT Glutathione S-transferase alpha I OS=Oryctolagus cuniculus PE=1
SV=1
Length = 223
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 56 GAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRA 87
G +V TRA ++YV +H L+GK +++RA
Sbjct: 62 GMKLVQTRAILNYVANKHN---LYGKDMKERA 90
>sp|C3NEW0|GLYA_SULIY Serine hydroxymethyltransferase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=glyA PE=3 SV=1
Length = 433
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 38 GSLPL--HPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAH 95
GSL L HP+K +P+ A+GA +V AHV+ ++ ++ L++ A ++T H
Sbjct: 171 GSLYLFPHPTKELAPHVHAVGAKLVYDAAHVYGLIEGK----VWSSPLKEGADIMTVSTH 226
Query: 96 VHYVVTEHGIAF 107
+ + G F
Sbjct: 227 KTFPGPQGGAIF 238
>sp|C3NGT4|GLYA_SULIN Serine hydroxymethyltransferase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=glyA PE=3 SV=1
Length = 433
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 38 GSLPL--HPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAH 95
GSL L HP+K +P+ A+GA +V AHV+ ++ ++ L++ A ++T H
Sbjct: 171 GSLYLFPHPTKELAPHVHAVGAKLVYDAAHVYGLIEGK----VWSSPLKEGADIMTVSTH 226
Query: 96 VHYVVTEHGIAF 107
+ + G F
Sbjct: 227 KTFPGPQGGAIF 238
>sp|C3MQN2|GLYA_SULIL Serine hydroxymethyltransferase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=glyA PE=3 SV=1
Length = 433
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 38 GSLPL--HPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAH 95
GSL L HP+K +P+ A+GA +V AHV+ ++ ++ L++ A ++T H
Sbjct: 171 GSLYLFPHPTKELAPHVHAVGAKLVYDAAHVYGLIEGK----VWSSPLKEGADIMTVSTH 226
Query: 96 VHYVVTEHGIAF 107
+ + G F
Sbjct: 227 KTFPGPQGGAIF 238
>sp|C3N6F2|GLYA_SULIA Serine hydroxymethyltransferase OS=Sulfolobus islandicus (strain
M.16.27) GN=glyA PE=3 SV=1
Length = 433
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 38 GSLPL--HPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAH 95
GSL L HP+K +P+ A+GA +V AHV+ ++ ++ L++ A ++T H
Sbjct: 171 GSLYLFPHPTKELAPHVHAVGAKLVYDAAHVYGLIEGK----VWSSPLKEGADIMTVSTH 226
Query: 96 VHYVVTEHGIAF 107
+ + G F
Sbjct: 227 KTFPGPQGGAIF 238
>sp|C4KHW7|GLYA_SULIK Serine hydroxymethyltransferase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=glyA PE=3 SV=1
Length = 433
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 38 GSLPL--HPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAH 95
GSL L HP+K +P+ A+GA +V AHV+ ++ ++ L++ A ++T H
Sbjct: 171 GSLYLFPHPTKELAPHVHAVGAKLVYDAAHVYGLIEGK----VWSSPLKEGADIMTVSTH 226
Query: 96 VHYVVTEHGIAF 107
+ + G F
Sbjct: 227 KTFPGPQGGAIF 238
>sp|C3MWN2|GLYA_SULIM Serine hydroxymethyltransferase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=glyA PE=3 SV=1
Length = 433
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 38 GSLPL--HPSKPPSPNEVAIGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAH 95
GSL L HP+K +P+ A+GA +V AHV+ ++ ++ L++ A ++T H
Sbjct: 171 GSLYLFPHPTKELAPHVHAVGAKLVYDAAHVYGLIEGK----VWSSPLKEGADIMTVSTH 226
Query: 96 VHYVVTEHGIAF 107
+ + G F
Sbjct: 227 KTFPGPQGGAIF 238
>sp|P15937|ACH1_NEUCR Acetyl-CoA hydrolase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acu-8
PE=3 SV=2
Length = 525
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 92 TRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFER 139
T + +VTE+G+A + G + R+RA +I+ D + + KA FE+
Sbjct: 440 TEHDLDVIVTENGLADVRGLSPRERARVIIDKCAHDVYKPILKAYFEK 487
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,055,330
Number of Sequences: 539616
Number of extensions: 2044216
Number of successful extensions: 6012
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 6002
Number of HSP's gapped (non-prelim): 41
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)