Query psy11854
Match_columns 141
No_of_seqs 141 out of 1219
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 20:37:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11854.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11854hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qli_A Coenzyme A transferase; 100.0 2E-35 6.8E-40 257.8 7.1 136 4-139 172-452 (455)
2 3eh7_A 4-hydroxybutyrate COA-t 100.0 1.1E-33 3.8E-38 245.1 7.5 138 4-141 151-434 (434)
3 2oas_A ATOA, 4-hydroxybutyrate 100.0 4.3E-33 1.5E-37 240.9 8.4 138 4-141 142-425 (436)
4 3gk7_A 4-hydroxybutyrate COA-t 100.0 4.7E-32 1.6E-36 236.0 9.7 138 4-141 147-435 (448)
5 4eu9_A Succinyl-COA:acetate co 100.0 2.2E-30 7.4E-35 227.6 9.4 56 84-139 417-473 (514)
6 3d3u_A 4-hydroxybutyrate COA-t 100.0 5.4E-29 1.8E-33 214.9 7.9 137 4-140 148-430 (439)
7 2g39_A Acetyl-COA hydrolase; c 99.9 7E-27 2.4E-31 205.4 12.7 53 87-139 414-467 (497)
8 2nvv_A Acetyl-COA hydrolase/tr 99.9 5.5E-26 1.9E-30 200.1 9.7 52 87-138 410-462 (506)
9 1xr4_A Putative citrate lyase 99.9 1.3E-23 4.5E-28 185.0 5.6 136 4-141 196-478 (509)
10 2hj0_A Putative citrate lyase, 99.8 5.1E-22 1.8E-26 175.3 5.7 136 4-141 199-482 (519)
11 3k6m_A Succinyl-COA:3-ketoacid 98.9 4.5E-10 1.5E-14 98.5 1.5 56 3-58 197-269 (481)
12 2ahu_A Putative enzyme YDIF; C 98.5 2.9E-08 1E-12 87.7 2.6 34 5-38 219-255 (531)
13 1poi_A Glutaconate coenzyme A- 97.7 4.2E-06 1.4E-10 69.4 -0.3 56 4-59 203-277 (317)
14 3cdk_A Succinyl-COA:3-ketoacid 97.4 4.7E-05 1.6E-09 60.9 2.1 35 4-38 184-221 (241)
15 3gk7_A 4-hydroxybutyrate COA-t 97.1 5.7E-05 1.9E-09 65.7 -0.9 62 56-128 380-446 (448)
16 4eu9_A Succinyl-COA:acetate co 97.0 5.7E-05 2E-09 66.2 -1.5 45 66-121 429-474 (514)
17 3rrl_B Succinyl-COA:3-ketoacid 96.8 0.0003 1E-08 55.3 1.3 43 88-135 156-198 (207)
18 2oas_A ATOA, 4-hydroxybutyrate 96.8 0.00014 4.8E-09 62.6 -1.0 56 56-122 370-425 (436)
19 3qli_A Coenzyme A transferase; 96.7 0.00015 5.1E-09 63.3 -1.8 51 59-120 402-452 (455)
20 3eh7_A 4-hydroxybutyrate COA-t 96.4 0.00037 1.3E-08 60.2 -0.7 55 56-121 379-433 (434)
21 3rrl_A Succinyl-COA:3-ketoacid 96.1 0.0028 9.5E-08 50.6 2.6 35 4-38 184-221 (235)
22 3d3u_A 4-hydroxybutyrate COA-t 94.5 0.0024 8.3E-08 54.7 -2.6 59 56-125 376-434 (439)
23 2g39_A Acetyl-COA hydrolase; c 94.3 0.0043 1.5E-07 54.4 -1.5 53 4-56 156-237 (497)
24 1poi_B Glutaconate coenzyme A- 93.5 0.031 1.1E-06 45.1 2.2 23 88-111 179-201 (260)
25 2nvv_A Acetyl-COA hydrolase/tr 92.1 0.012 4.2E-07 51.6 -2.2 53 4-56 151-232 (506)
26 1xr4_A Putative citrate lyase 85.3 0.098 3.3E-06 45.9 -1.5 51 62-125 430-481 (509)
27 2hj0_A Putative citrate lyase, 85.3 0.15 5.3E-06 44.8 -0.2 51 62-125 434-485 (519)
28 3c8l_A FTSZ-like protein of un 28.8 61 0.0021 23.3 3.8 34 97-130 5-44 (122)
No 1
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=100.00 E-value=2e-35 Score=257.83 Aligned_cols=136 Identities=32% Similarity=0.442 Sum_probs=112.2
Q ss_pred CCCEEEEEeCCCCCcccCC-CccccCcccEEEeeCCCCCCCCCCCCChhhhhcccee---eecC----------------
Q psy11854 4 RTAIATAQVNKYMPRTFGD-ALVHQSHFDFACQVDGSLPLHPSKPPSPNEVAIGAGV---VTTR---------------- 63 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~Gd-~~Ihis~id~iVe~d~pL~~~~~~~~~~~~~~IG~~v---i~D~---------------- 63 (141)
.|++||+|||++|||++|+ +.||+++||++||+|.|+++.+..++++++++||.++ ++|+
T Consensus 172 ~Ak~VI~EVN~~vP~~~g~r~~I~~~~Vd~iVe~~~p~~~~~~~~~~~~~~~Ia~~va~~i~dG~~lQ~GiG~ip~Av~~ 251 (455)
T 3qli_A 172 SARRFIVEVNRYMPRVQGEAAAIHISEVDAIVENHVPLIEMPVRSAIPEYTSISHIIADLVPDGACLQMGVGALPNLVCG 251 (455)
T ss_dssp HSSEEEEEECTTSCCCCBTTCEEEGGGCSEEEECCCCCCCCCCCCCCTHHHHHHHHHHHTCCTTCEEEECSSHHHHHHHH
T ss_pred hcCEEEEEecCCCCCCCCCCCcCChHHcEEEEECCCCCccCCCCCCChHHHHHHHHHHHHhcCCCeEEeccchHHHHHHH
Confidence 5789999999999999999 9999999999999999999999999999999999975 5551
Q ss_pred ---Cce----eE--------------------------------------------------------------------
Q psy11854 64 ---AHV----HY-------------------------------------------------------------------- 68 (141)
Q Consensus 64 ---~~~----h~-------------------------------------------------------------------- 68 (141)
+++ ||
T Consensus 252 ~L~~~~~lgi~tE~~~d~~~dLi~aG~i~~~~K~~~~G~~v~~f~~gs~~ly~~~~~np~~~~~~~~y~N~p~~i~~~~~ 331 (455)
T 3qli_A 252 VLKDRNDLGIHTEVLNPGLVDLIRRGVVTNQRKTLDRGRSVFTFAMGQQEMYEYLNDHPAIFSRPVDYVNDPHIIAQNDN 331 (455)
T ss_dssp HGGGCCSBEEBCSEECHHHHHHHHHTCBCCTTCSSSTTSEEESEECCCHHHHHHHTTCTTEEECBHHHHTCHHHHTTSTT
T ss_pred hcCcCCCeEEEcCCcccchHHHHHCCCcccccccccCCceEEEeccchHHHHHHHhhCCCEEEeeccccCCHHHHhCCCC
Confidence 111 21
Q ss_pred ---------------EEcCC----------C-eeeeecCcccC--------------C----------ccceeecCcccE
Q psy11854 69 ---------------VVTEH----------G-IAFLFGKTLRQ--------------R----------AGVVTTRAHVHY 98 (141)
Q Consensus 69 ---------------vvt~~----------G-~~f~~G~~l~~--------------g----------a~v~~~r~~~~~ 98 (141)
|+++. | .||++|+.+++ | ..++|+|+++||
T Consensus 332 ~i~in~a~evd~~G~v~~~~~~~~~~~G~GG~~Df~~gA~~s~ggk~ii~~~s~~k~G~is~Iv~~~~~~vtt~~~~v~~ 411 (455)
T 3qli_A 332 VVSINATLQIDLTGACNSEHMLGHQYSASGGQLDFVRGAYASKGGRSIIATPSTAAKGTVSRIIPRIDGPVTTPRIDTHY 411 (455)
T ss_dssp EEEEEECSEEETTSCEECCCSTTCCCGGGSSHHHHHHHHHHSTTCEEEEECCSEETTTTEESEESCCSSSCSBCTTTCCE
T ss_pred cEEeeeeEEEecCCCeeeeccCCeeecCcChhHHHHHHHhhcCCCcEEEEEeCccCCCCCCeEeccCCCCcccCcccccE
Confidence 11110 1 45555533221 2 256789999999
Q ss_pred EEeeceeeecCCCCHHHHHHHhHhcCCCCCHHHHHHHHHHh
Q psy11854 99 VVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFER 139 (141)
Q Consensus 99 vVTEyG~a~L~g~sl~erA~~lI~iAhP~~R~~L~~~a~~~ 139 (141)
||||||+|+|+|+|++|||++||+|||||||++|+++|+++
T Consensus 412 vvTE~Gva~l~G~s~~eRa~~lI~iAHPdfR~~L~~~A~~~ 452 (455)
T 3qli_A 412 IVTEFGAVNLKGLSSTERALRIIELAHPDFRDELTQAAKKM 452 (455)
T ss_dssp EEETTEEEECTTCCHHHHHHHHHTTSCHHHHHHHHHHHHHT
T ss_pred EEeccEEEECCCCCHHHHHHHHHHccCcchHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999875
No 2
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.1e-33 Score=245.07 Aligned_cols=138 Identities=38% Similarity=0.502 Sum_probs=115.5
Q ss_pred CCCEEEEEeCCCCCcccCCCccccCcccEEEeeCCCCCCCCCCCCChhhhhcccee---eecC-----------------
Q psy11854 4 RTAIATAQVNKYMPRTFGDALVHQSHFDFACQVDGSLPLHPSKPPSPNEVAIGAGV---VTTR----------------- 63 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~Gd~~Ihis~id~iVe~d~pL~~~~~~~~~~~~~~IG~~v---i~D~----------------- 63 (141)
.|++||+|||++||+++|+..||+++||++||+|.|+++.+..++++++++||.++ ++|+
T Consensus 151 ~A~~VI~eVn~~vP~~~g~~~I~~~~VD~IVe~~~p~~~~~~~~~~~~~~~Ia~~~a~~i~dG~~lq~GiG~ip~AV~~~ 230 (434)
T 3eh7_A 151 SAHLVIGEINRQMPYVHGDNLIHISKLDYIVMADYPIYSLAKPKIGEVEEAIGRNCAELIEDGATLQLGIGAIPDAALLF 230 (434)
T ss_dssp HCSEEEEEEETTSCCCEESCEEEGGGCSEEEEECCCCCCCCCCCCCHHHHHHHHHHHHTCCTTCEEECCSSHHHHHHHHT
T ss_pred hCCeEEEEecCCCCCCCCCCeeeeEeeEEEEECCCCcccCCCCCCChHHHHHHHHHHHhccCCCEEEeccchHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999964 4551
Q ss_pred --Cce----eE---------------------------------------------------------------------
Q psy11854 64 --AHV----HY--------------------------------------------------------------------- 68 (141)
Q Consensus 64 --~~~----h~--------------------------------------------------------------------- 68 (141)
+++ |+
T Consensus 231 L~~~~~lgi~tE~~~d~~~~lie~G~i~~~~k~~~~g~~~~~f~~G~~~~y~~~~~np~~~~~~~~~~n~p~~i~~~d~~ 310 (434)
T 3eh7_A 231 LKDKKDLGIHTEMFSDGVVELVRSGVITGKKKTLHPGKMVATFLMGSEDVYHFIDKNPDVELYPVDYVNDPRVIAQNDNM 310 (434)
T ss_dssp TTTCCSBEEECSEECHHHHHHHHTTSBCCTTCSSSTTCEEESEECCCHHHHHHHTTCTTEEECCHHHHTCHHHHTTSSSE
T ss_pred hhhcCCceEEccCcchhHHHHHHCCCccceeecccCCceeEeecchHHHHHHHHHhCCCeEEeccccccCHHHHcCCCCc
Confidence 111 11
Q ss_pred --------------EEcC---------CC--ee-------------eeecC-------------cccCCccceeecCccc
Q psy11854 69 --------------VVTE---------HG--IA-------------FLFGK-------------TLRQRAGVVTTRAHVH 97 (141)
Q Consensus 69 --------------vvt~---------~G--~~-------------f~~G~-------------~l~~ga~v~~~r~~~~ 97 (141)
|++. .| .| ++.++ .++.|++++++|.++|
T Consensus 311 i~in~a~evD~~G~vn~~~~g~~~~~G~GG~~Df~~ga~~s~ggk~ii~~~st~~~G~is~iv~~~~~g~~v~~~~~~v~ 390 (434)
T 3eh7_A 311 VSINSCIEIDLMGQVVSECIGSKQFSGTGGQVDYVRGAAWSKNGKSIMAIPSTAKNGTASRIVPIIAEGAAVTTLRNEVD 390 (434)
T ss_dssp EEEECCSEEETTCCEECCSTTSCCSBCCCTHHHHHHHHHHSTTCEEEEECCSEETTTTEESEESSCCTTCCEEECTTTCC
T ss_pred EEEehhheeccCCCeeeeccCCeeecccCchHHHhccccccCCCceEEEEeeecCCCCCCeEeeCCCCCCCceeCcccee
Confidence 1111 01 22 33221 3566778999999999
Q ss_pred EEEeeceeeecCCCCHHHHHHHhHhcCCCCCHHHHHHHHHHhcC
Q psy11854 98 YVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFERLK 141 (141)
Q Consensus 98 ~vVTEyG~a~L~g~sl~erA~~lI~iAhP~~R~~L~~~a~~~~~ 141 (141)
|||||||+|+|+|++++|||++||+||||+||++|.++|+++||
T Consensus 391 ~vVTE~Gva~L~G~~~~Era~~li~iAhpdfr~~L~~~a~~~~~ 434 (434)
T 3eh7_A 391 YVVTEYGIAQLKGKSLRQRAEALIAIAHPDFREELTKHLRKRFG 434 (434)
T ss_dssp EEEETTEEEECTTCCHHHHHHHHHTTSCHHHHHHHHHHHHHHHC
T ss_pred EEEcccEEEECCCCCHHHHHHHHhcCCCCCcHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999986
No 3
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=99.98 E-value=4.3e-33 Score=240.94 Aligned_cols=138 Identities=44% Similarity=0.618 Sum_probs=113.3
Q ss_pred CCCEEEEEeCCCCCcccCCCccccCcccEEEeeCCCCCCCCCCCCChhhhhcccee---eecC-----------------
Q psy11854 4 RTAIATAQVNKYMPRTFGDALVHQSHFDFACQVDGSLPLHPSKPPSPNEVAIGAGV---VTTR----------------- 63 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~Gd~~Ihis~id~iVe~d~pL~~~~~~~~~~~~~~IG~~v---i~D~----------------- 63 (141)
.|++||+|||++||+++|++.||.++||++||.|.|+++.+..++++++++||.++ ++|+
T Consensus 142 aA~~VIveVn~~vP~~~g~~~I~~~~VD~VVe~d~p~~~~~~~~~~~~~~~Ia~~~a~~i~dg~~lqlGiG~ip~av~~~ 221 (436)
T 2oas_A 142 VAGKIIAHINPQMPRTHGDGFIHIDRFAAVYEQSASLPIHSFATGDAVSLAIGQHVAELVRDGDCLQMGIGAIPDAVLSC 221 (436)
T ss_dssp HCSEEEEEECTTSCCCEESCEEEGGGCSEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCTTCEEECCSSHHHHHHHHT
T ss_pred hcCeEEEEEcCCCCCCCCCCcCChHHeEEEEECCCCcccCCCCCCChHHHHHHHHHHHhcCCCCEEeecCcHHHHHHHHH
Confidence 57899999999999999999999999999999999999999899999999999964 4441
Q ss_pred --Cce----eE---------------------------------------------------------------------
Q psy11854 64 --AHV----HY--------------------------------------------------------------------- 68 (141)
Q Consensus 64 --~~~----h~--------------------------------------------------------------------- 68 (141)
+++ ||
T Consensus 222 l~~~~~l~i~te~~~d~~~~l~~~G~i~~~~k~~~~g~~~~~f~~Gs~~~y~~~~~n~~~~~~~~~~~n~~~~i~~~~~~ 301 (436)
T 2oas_A 222 LTGHKDLGVHTELFSDGILQLVEKGVINNTKKRFYPGKLVTGFALGSQKLYDYVDDNPAVIFMDIEQVNDTSIIRKNPNV 301 (436)
T ss_dssp CTTCCSBEEBCSEECHHHHHHHHTTSBCCTTCSSSTTSEEESEECSCHHHHHHHTTCTTEEECCHHHHTCHHHHTTSTTE
T ss_pred HhhcCceeEEeccccHhHHHHHHCCCcccccccccCCcceeeeccchHHHHHHHhcCCcEEeecccccCCHHHHhCCCCc
Confidence 111 11
Q ss_pred --------------EEc---------CCC--ee-------------eeecC-------------cccCCccceeecCccc
Q psy11854 69 --------------VVT---------EHG--IA-------------FLFGK-------------TLRQRAGVVTTRAHVH 97 (141)
Q Consensus 69 --------------vvt---------~~G--~~-------------f~~G~-------------~l~~ga~v~~~r~~~~ 97 (141)
|++ +.| .| ++... .+++|+.++|+|.++|
T Consensus 302 ~~i~~a~evD~~G~vn~~~~g~~~~~G~GG~~D~~~gA~~~~ggk~ii~~~~t~k~G~iskiv~~~~~g~~v~t~~~~v~ 381 (436)
T 2oas_A 302 MAINSALQVDLTGQVCADSIGTKIYSGVGGQMDFIRGAGLSEGGRSVIALPSTAAGGRISRIASVLSPGAGVVTTRAHVH 381 (436)
T ss_dssp EEEECCSEEETTCCEECSEETTEECSCCTTHHHHHHHHHHSTTCEEEEECCSEETTTTEESEESSCCTTCCEEECTTTCC
T ss_pred EEEeccceecCCCCeeeeecCCeeecccccHHHHhhhhhhcCCCcEEEEEeeecCCCCCCEEeeccCCCCCcccCcccCC
Confidence 111 111 22 33221 3566678999999999
Q ss_pred EEEeeceeeecCCCCHHHHHHHhHhcCCCCCHHHHHHHHHHhcC
Q psy11854 98 YVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFERLK 141 (141)
Q Consensus 98 ~vVTEyG~a~L~g~sl~erA~~lI~iAhP~~R~~L~~~a~~~~~ 141 (141)
|||||||+|||+|++++|||++||+||||+|||+|+++|+++++
T Consensus 382 ~vvTE~Gva~l~g~~~~era~~li~iAhp~~r~~L~~~a~~~~~ 425 (436)
T 2oas_A 382 YIVTEYGAANLKGRSLRERAQALINIAHPDFREQLSRDAFEVWG 425 (436)
T ss_dssp EEEETTEEEECTTCCHHHHHHHHHTTSCHHHHHHHHHHHHHTSC
T ss_pred EEECCCEEEECCCCCHHHHHHHhhcCCCcchHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999998753
No 4
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=99.97 E-value=4.7e-32 Score=236.02 Aligned_cols=138 Identities=35% Similarity=0.488 Sum_probs=114.2
Q ss_pred CCCEEEEEeCCCCCcccCCCccccCcccEEEeeCCCCCCCCCCCCChhhhhcccee---eecC-----------------
Q psy11854 4 RTAIATAQVNKYMPRTFGDALVHQSHFDFACQVDGSLPLHPSKPPSPNEVAIGAGV---VTTR----------------- 63 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~Gd~~Ihis~id~iVe~d~pL~~~~~~~~~~~~~~IG~~v---i~D~----------------- 63 (141)
.|++||+|||++|||++|+..||+++||++||+|.|+++.+..++++++++||.++ ++|+
T Consensus 147 ~A~~VI~eVn~~vP~~~g~~~I~~~~VD~IVe~d~p~~~~~~~~~~~~~~~IA~~~a~~i~dG~~lqlGIG~ip~aV~~~ 226 (448)
T 3gk7_A 147 SAKIVLAEVNDQVPVVYGDTFVHVSEIDKFVETSHPLPEIGLPKIGEVEAAIGKHCASLIEDGSTLQLGIGAIPDAVLSQ 226 (448)
T ss_dssp HCSEEEEEEETTSCCCSBSCEEEGGGCSEEEEECCCCCCCCCCCCCHHHHHHHHHHHTTCCTTCEEEBCSSHHHHHHHHT
T ss_pred hCCeEEEEeeccCCCCCCCCcccccCeEEEEECCCCCcCCCCCCCCcHHHHHHHHHHHHccCCCEEEeccCcHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999964 4441
Q ss_pred --Cce----eE---------------------------------------------------------------------
Q psy11854 64 --AHV----HY--------------------------------------------------------------------- 68 (141)
Q Consensus 64 --~~~----h~--------------------------------------------------------------------- 68 (141)
+++ ||
T Consensus 227 L~~~~~l~~~tE~~~d~~~~l~e~G~v~~~~k~i~~g~~~~~f~~G~~~~y~~~~~~~~~~~~~~~~~N~p~~i~~l~~~ 306 (448)
T 3gk7_A 227 LKDKKHLGIHSEMISDGVVDLYEAGVIDCSQKSIDKGKMAITFLMGTKRLYDFAANNPKVELKPVDYINHPSVVAQCSKM 306 (448)
T ss_dssp CTTCCSBEEEEEEECHHHHHHHHTTSBCCTTCSSSTTSEEEEEECSCHHHHHHHTTCTTEEECBHHHHTCHHHHTTSTTE
T ss_pred hhhcCCeeEEcCCChhhhhhhhhCCcccCchhcccCCccEEEEChhHHHHHHHhcCCCCEEEECCcccCCHHHHhccCCc
Confidence 111 22
Q ss_pred --------------EEcC---------CC--eeeee----------------------c---C------cccCCccceee
Q psy11854 69 --------------VVTE---------HG--IAFLF----------------------G---K------TLRQRAGVVTT 92 (141)
Q Consensus 69 --------------vvt~---------~G--~~f~~----------------------G---~------~l~~ga~v~~~ 92 (141)
|++. .| .||++ | . .++.|++++|+
T Consensus 307 iain~alevD~~G~vns~~~g~~~~~G~GG~~Df~~gA~~s~g~~~k~Ii~~~st~k~G~g~~is~IV~~~~~g~~v~t~ 386 (448)
T 3gk7_A 307 VCINACLQVDFMGQIVSDSIGTKQFSGVGGQVDFVRGASMSIDGKGKAIIAMPSVAKKKDGSMISKIVPFIDHGAAVTTS 386 (448)
T ss_dssp EEEEECSEEETTCCEECSEETTEECSCCTTHHHHHHHHHTCTTSCCEEEEECCSEEECTTSCEEESEESSCCTTCCCSBC
T ss_pred EEEehheeeccCCCeeeeccCCceecccCchHHHhcchhhccCCCCcEEEEEeeeecCCCCCCCCeEeecCCCCCCceeC
Confidence 1111 11 22222 3 1 24556679999
Q ss_pred cCcccEEEeeceeeecCCCCHHHHHHHhHhcCCCCCHHHHHHHHHHhcC
Q psy11854 93 RAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFERLK 141 (141)
Q Consensus 93 r~~~~~vVTEyG~a~L~g~sl~erA~~lI~iAhP~~R~~L~~~a~~~~~ 141 (141)
|.++||||||||+|+|+|++++|||++||+||||+||++|.++++++++
T Consensus 387 ~~~v~~iVTE~Gva~L~G~~~~era~~li~iAhp~fr~~L~~~~~~~~~ 435 (448)
T 3gk7_A 387 RNDADYVVTEYGIAEMKGKSLQDRARALINIAHPDFKDELKAEFEKRFN 435 (448)
T ss_dssp TTTCCEEEETTEEEECTTCCHHHHHHHHHHTSCGGGHHHHHHHHHHHHS
T ss_pred cCceEEEEeceEEEEccCCCHHHHHHHHHhcCCCcCHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999998865
No 5
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=99.96 E-value=2.2e-30 Score=227.64 Aligned_cols=56 Identities=32% Similarity=0.280 Sum_probs=51.9
Q ss_pred cCCccceeecCcccEEEeeceeeecCCCCHHHHHHHhHh-cCCCCCHHHHHHHHHHh
Q psy11854 84 RQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALIN-IAPPDHREALEKAAFER 139 (141)
Q Consensus 84 ~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI~-iAhP~~R~~L~~~a~~~ 139 (141)
+.++.|+++|+|+||||||||+|+|||+|++|||++||+ |||||||++|++++++.
T Consensus 417 p~~~~v~~~~~~v~~vVTE~Gva~LrG~s~~era~~lI~~iAhp~~r~~L~~~~~~a 473 (514)
T 4eu9_A 417 PMAAHVDHIMQDAQIFVTEQGLADLRGLSPVQRAREIISKCAHPDYRPMLQDYFDRA 473 (514)
T ss_dssp SSCSSCSBCGGGCCEEEETTEEEECTTCCHHHHHHHHHHHTSCTTTHHHHHHHHHHH
T ss_pred cCCCCccCCCCcCCEEEcCCEEEEecCCCHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 456788999999999999999999999999999999998 99999999999988654
No 6
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=99.95 E-value=5.4e-29 Score=214.86 Aligned_cols=137 Identities=39% Similarity=0.516 Sum_probs=104.7
Q ss_pred CCCEEEEEeCCCCCcccCCCccccCcccEEEeeCCCCCCCCCCCCChhhhhcccee---eecC-----------------
Q psy11854 4 RTAIATAQVNKYMPRTFGDALVHQSHFDFACQVDGSLPLHPSKPPSPNEVAIGAGV---VTTR----------------- 63 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~Gd~~Ihis~id~iVe~d~pL~~~~~~~~~~~~~~IG~~v---i~D~----------------- 63 (141)
.|++||+|||+.||+++|+..||.++||++||+|.|+.+.+..++++.+++||..+ ++|+
T Consensus 148 aA~~VIveVn~~vp~~~g~~~I~~~~VD~VVe~d~p~~~~~~~~~~~~~~~Ia~~~a~~i~dg~~lqlGiG~ip~av~~~ 227 (439)
T 3d3u_A 148 CAPVVVAEVNKQMPFIGGENLIHISKLTHIIEVDEPIAEVLPPAGSDLELRIGQNCASLIKDGDTLQLGIGGIPDAVLRA 227 (439)
T ss_dssp HCSEEEEEEESSSCCCEESCEEEGGGCSEEEEECCCCCCCCC--CCHHHHHHHHHHHTTCCTTCEEEECSSHHHHHHHHT
T ss_pred hCCeEEEEECCCCCCCCCCCcCChhhcEEEEECCCCcccCCCCCCChHHHHHHHHHHHhcCCCCEEEeccchHHHHHHHH
Confidence 57899999999999999999999999999999999999988889999999999964 4441
Q ss_pred --Cce----eE---------------------------------------------------------------------
Q psy11854 64 --AHV----HY--------------------------------------------------------------------- 68 (141)
Q Consensus 64 --~~~----h~--------------------------------------------------------------------- 68 (141)
.++ ||
T Consensus 228 l~~~~~l~i~te~~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~~~g~~~~y~~~~~~~~~~~~~~~~~n~p~~i~~~~~d 307 (439)
T 3d3u_A 228 LEGHKDLGIHTEMFTDGVMRMIRKGIINGKKKTLHPEKVVTSLIFGSKELYDFVNNNPVIECYPVDYINNPDVIGKNDRM 307 (439)
T ss_dssp TTTCCSBEEECSCBCHHHHHHHHHTCBCCSSCSSSTTSEEESBBCCCHHHHHHHTTCTTEEECBHHHHTCHHHHHHSSSE
T ss_pred HhhCCCceEEEEEecchhHhhccCCcccccccccCCCceeEEEccCchHHHHHhcCCCCEEEEeccccCCHHHhhccCCc
Confidence 111 11
Q ss_pred --------------EEc---------CC-C-eeeeecC--------------------------cccCCccceeecCccc
Q psy11854 69 --------------VVT---------EH-G-IAFLFGK--------------------------TLRQRAGVVTTRAHVH 97 (141)
Q Consensus 69 --------------vvt---------~~-G-~~f~~G~--------------------------~l~~ga~v~~~r~~~~ 97 (141)
|++ +. | .||++|+ .+.+|+.+++++.++|
T Consensus 308 v~i~ga~evD~~G~vn~~~~g~~~~~G~GG~~D~~~~A~~s~~gk~ii~~~~t~k~G~~s~iv~~~~~g~~v~~~~~~v~ 387 (439)
T 3d3u_A 308 VSINSCLEMDLMGQAASESIGYEQFSGSGGQVDFLRGAKRSKGGISIMAFPSTAKKGTESRIVPILKEGACVTTGRNEVD 387 (439)
T ss_dssp EEEECCSCEETTSCC--------------CHHHHHHHHTTSTTCEEEEECCSEETTTTEESEESSCC------CCSTTCS
T ss_pred EEEehheEecCCCCEeeeccCCeeecccccHHHHhhcccccCCCeEEEEEeeecCCCCCCeEeECccCCCCceeCCCcce
Confidence 000 00 1 2222222 2344467888999999
Q ss_pred EEEeeceeeecCCCCHHHHHHHhHhcCCCCCHHHHHHHHHHhc
Q psy11854 98 YVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFERL 140 (141)
Q Consensus 98 ~vVTEyG~a~L~g~sl~erA~~lI~iAhP~~R~~L~~~a~~~~ 140 (141)
+||||||+|+|+|++++|||.+||+||||+||++|.++|++++
T Consensus 388 ~vVTE~gva~l~g~~l~e~a~~lI~iAhp~fr~~L~~~a~~~~ 430 (439)
T 3d3u_A 388 YVVTEYGVARLRGATLRQRAEALTAIAHPDFRPALEEEIRRRF 430 (439)
T ss_dssp EEEETTEEEECTTCCHHHHHHHHHHHSCTTHHHHHHHHHHTTC
T ss_pred EEECCCEEEEeCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999998764
No 7
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=99.94 E-value=7e-27 Score=205.37 Aligned_cols=53 Identities=32% Similarity=0.328 Sum_probs=49.4
Q ss_pred ccceeecCcccEEEeeceeeecCCCCHHHHHHHhH-hcCCCCCHHHHHHHHHHh
Q psy11854 87 AGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALI-NIAPPDHREALEKAAFER 139 (141)
Q Consensus 87 a~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI-~iAhP~~R~~L~~~a~~~ 139 (141)
..++++|+++||||||||+|+|+|++++|||++|| +||||+||++|.+++++.
T Consensus 414 ~~v~t~~~~v~~vVTE~gva~l~G~~~~era~~lI~~iAhp~fr~~L~~~~~~~ 467 (497)
T 2g39_A 414 SHVDHTEHDVDILVTEQGLADLRGLAPRERARVIIENCVHPSYQAPLLDYFEAA 467 (497)
T ss_dssp SSCSBCGGGCCEEEETTEEEECTTCCHHHHHHHHHHHTSCTTTHHHHHHHHHHH
T ss_pred CCeecCCCceeEEECCCEEEEccCCCHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 36788999999999999999999999999999999 899999999999888754
No 8
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=99.93 E-value=5.5e-26 Score=200.07 Aligned_cols=52 Identities=33% Similarity=0.388 Sum_probs=48.4
Q ss_pred ccceeecCcccEEEeeceeeecCCCCHHHHHHHhH-hcCCCCCHHHHHHHHHH
Q psy11854 87 AGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALI-NIAPPDHREALEKAAFE 138 (141)
Q Consensus 87 a~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI-~iAhP~~R~~L~~~a~~ 138 (141)
..++++|.++|+||||||+|+|+|++++|||++|| +||||+||++|.+++++
T Consensus 410 ~~v~~~~~~v~~vVTE~Gva~L~G~~~~era~~iI~~iAhp~fr~~L~~~~~~ 462 (506)
T 2nvv_A 410 AHHDHSEHSVKVIISEWGVADLRGKNPRERAHEIIDKCVHPDYRPLLRQYLEL 462 (506)
T ss_dssp SSCSBCTTTCCEEEETTEEEECTTCCHHHHHHHHHHHTSCGGGHHHHHHHTTS
T ss_pred CCcccCCCceeEEECCCEEEEccCCCHHHHHHHHHHHcCCCCchHHHHHHHHH
Confidence 36788999999999999999999999999999999 89999999999887754
No 9
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=99.88 E-value=1.3e-23 Score=185.01 Aligned_cols=136 Identities=21% Similarity=0.168 Sum_probs=106.7
Q ss_pred CCCEEEEEeCCCCCcccCCCccccCcccEEEeeCCC-----CCC-CCCCCCChhhhhcccee---e------ecC-----
Q psy11854 4 RTAIATAQVNKYMPRTFGDALVHQSHFDFACQVDGS-----LPL-HPSKPPSPNEVAIGAGV---V------TTR----- 63 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~Gd~~Ihis~id~iVe~d~p-----L~~-~~~~~~~~~~~~IG~~v---i------~D~----- 63 (141)
.|++||+|||++||+++|+..||++.||++||.|.| |.+ .+..++++++++||.++ + +|+
T Consensus 196 ~A~~VIaEVn~~vP~~~~~~~Ip~~~VD~IVe~d~~gdp~ki~~~~~~~~~~~~~~~IA~~~a~~i~~~g~~~dG~~lql 275 (509)
T 1xr4_A 196 YAKCVVLLTEEWVEFPNYPASIAQDQVDLIVQVDEVGDPEKITAGAIRLSSNPRELLIARQAANVIEHSGYFCDGFSLQT 275 (509)
T ss_dssp HCSEEEEEESCEECSSCSSCSBCGGGCSEEEECSCSSCHHHHHSCCCCCCCCHHHHHHHHHHHHHHHTTSCCSTTEEEEC
T ss_pred hCCEEEEEeCCCCCCCCCCcccCcEeeEEEEeCCCCCChhhcccCCCCCCCChHHHHHHHHHHHHHHhcCcCCCCCEEEe
Confidence 578999999999999999999999999999999998 554 56778899999999974 5 662
Q ss_pred --------------Cc-e----eE--------------------------------------------------------
Q psy11854 64 --------------AH-V----HY-------------------------------------------------------- 68 (141)
Q Consensus 64 --------------~~-~----h~-------------------------------------------------------- 68 (141)
++ + |+
T Consensus 276 GIG~ip~aV~~~l~~~~~~l~i~se~g~~g~~d~~~~l~e~G~i~~~~~~~~f~~g~~~~~~~n~~~~~~~~~~~~n~~~ 355 (509)
T 1xr4_A 276 GTGGASLAVTRFLEDKMRRHNITASFGLGGITGTMVDLHEKGLIKALLDTQSFDGDAARSLAQNPHHIEISTNQYANPAS 355 (509)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCCEEEEEEEECHHHHHHHHTTSBSCEEEEEECSHHHHHHHHHCTTEEECCHHHHTCTTC
T ss_pred ccChHHHHHHHHhhhhcccceeecccccCCcCCccHhHHhCCCccCCcceeEeeccHHHHHHhCCcceEEeccccccCcc
Confidence 01 0 22
Q ss_pred -----------------------EEcCC----------C--eeeeecC--------c--------ccCCccceeecCccc
Q psy11854 69 -----------------------VVTEH----------G--IAFLFGK--------T--------LRQRAGVVTTRAHVH 97 (141)
Q Consensus 69 -----------------------vvt~~----------G--~~f~~G~--------~--------l~~ga~v~~~r~~~~ 97 (141)
|++.. | .||.+|+ + ++.-+.++|+|.++|
T Consensus 356 ~~~~~~~ldiai~galevD~~G~vn~~~~~~g~~~~G~GG~~D~~~gA~~sii~~~~t~~~~skIV~~~~~v~t~~~~V~ 435 (509)
T 1xr4_A 356 KGAACERLNVVMLSALEIDVNFNVNVMTGSNGVLRGASGGHSDTAAGADLTIITAPLVRGRIPCVVEKVLTTVTPGASVD 435 (509)
T ss_dssp SCCGGGGCSEEEECCSEECTTCCEECSBCTTSCBCSBCTTHHHHHHHSSEEEEECCSEETTEESBCSSCSSCSBCGGGCC
T ss_pred hhhhhcCCCeEEeeeEEEccCCceeeeeccCCeEecccccHHHHhhccCeEEEEEcccCCCCCeEeeCCCCcccCcCeeC
Confidence 11110 1 2333332 1 223357889999999
Q ss_pred EEEeeceeee-cCCCCHHHHHHHhHhcCCCCCHHHHHHHHHHhcC
Q psy11854 98 YVVTEHGIAF-LFGKTLRQRAHALINIAPPDHREALEKAAFERLK 141 (141)
Q Consensus 98 ~vVTEyG~a~-L~g~sl~erA~~lI~iAhP~~R~~L~~~a~~~~~ 141 (141)
|||||||+|+ |+|++++|||++| +||| .|||+|+++|++.++
T Consensus 436 ~iVTE~Gva~~l~g~~l~Era~~l-~iAh-~~~e~L~~~a~~~~~ 478 (509)
T 1xr4_A 436 VLVTDHGIAVNPARQDLLDNLRAA-GVAL-MTIEQLQQRAEQLTG 478 (509)
T ss_dssp EEEETTEEEECTTCHHHHHHHHHT-TCCC-BCHHHHHHHHHHHHC
T ss_pred EEECCcEEEEcCCCCCHHHHhhcc-CCCc-CCHHHHHHHHHHhhC
Confidence 9999999999 9999999999999 9999 599999999987753
No 10
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=99.85 E-value=5.1e-22 Score=175.34 Aligned_cols=136 Identities=20% Similarity=0.210 Sum_probs=104.7
Q ss_pred CCCEEEEEeCCCCCcccCCCccccCcccEEEeeCCC-CCC-----CCCCCCChhhhhcccee---e------ecC-----
Q psy11854 4 RTAIATAQVNKYMPRTFGDALVHQSHFDFACQVDGS-LPL-----HPSKPPSPNEVAIGAGV---V------TTR----- 63 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~Gd~~Ihis~id~iVe~d~p-L~~-----~~~~~~~~~~~~IG~~v---i------~D~----- 63 (141)
.|++||+|||+.||+++|...||++.||++||+|.| +++ .+..++++.+++||.++ + +|+
T Consensus 199 ~A~~VIaEVn~~vP~~~~p~~I~~~~VD~IVe~d~p~~~~~~~~g~~~~~~~~~~~~IA~~~a~~i~~~g~l~dG~~lql 278 (519)
T 2hj0_A 199 YADQVVIVTDTLVPYPNTPISIPQTDVDYIVVVDAIGDPEGIAKGATRYTKNPKELLIAEYAAKVITSSPYYKEGFSFQT 278 (519)
T ss_dssp HCSEEEEEESSBCCSSCSSCSBCGGGCSEEEECSCSBCTHHHHSCCCCCCCCHHHHHHHHHHHHHHHTSTTCSTTCEEEC
T ss_pred hCCEEEEEeCCCCCCCCCCceeCeEeeEEEEECCCCCChhhhccCCCCCCCChHHHHHHHHHHHHHHhcccCCCCCEEEe
Confidence 588999999999999999999999999999999988 666 35577889999999863 3 552
Q ss_pred --------------Cc-e----eE--------------------------------------------------------
Q psy11854 64 --------------AH-V----HY-------------------------------------------------------- 68 (141)
Q Consensus 64 --------------~~-~----h~-------------------------------------------------------- 68 (141)
.+ + |+
T Consensus 279 GiG~ip~aV~~~L~~~~~~l~i~se~g~~g~~~~~~~lieaG~i~~~~~~~~f~~G~~~~~~~n~~~~~~~~~~~~~n~~ 358 (519)
T 2hj0_A 279 GTGGASLAVTRFMREQMIKDDIKANFALGGITNAMVELLEEGLVDKILDVQDFDHPSAVSLDRNAEKHYEIDANMYASPL 358 (519)
T ss_dssp CSSHHHHHHHHHHHHHHHHSCCCEEEECSEECHHHHHHHHTTSEEEEEESEESSHHHHHHHHHTTTTEEECCHHHHHCSS
T ss_pred ccChHHHHHHHHHhhhcccceeeeceeccCcChhHHHHHHCCCCCCCccccccccchHHHHHhCcHhhEEEchHHhhccC
Confidence 11 0 11
Q ss_pred ------------------------EEcCC----------C--eeeeecC--------cc--------cCCccceeecCcc
Q psy11854 69 ------------------------VVTEH----------G--IAFLFGK--------TL--------RQRAGVVTTRAHV 96 (141)
Q Consensus 69 ------------------------vvt~~----------G--~~f~~G~--------~l--------~~ga~v~~~r~~~ 96 (141)
|++.. | .||.+|+ +. +.-..++|++.++
T Consensus 359 n~p~~i~~ldv~ilga~eVD~~Gnvn~~~~~gg~~~~G~GG~~D~~~gA~~~ii~~~~t~g~~skiV~~~~~vtt~~~~V 438 (519)
T 2hj0_A 359 SKGSVINQLDICVLSALEVDTNFNVNVMTGSDGVIRGASGGHCDTAFAAKMSLVISPLVRGRIPTFVDKVNTVITPGTSV 438 (519)
T ss_dssp SSCCGGGGCSEEEECCSEECTTCCEECSBCTTCCBCCBCTTHHHHHHHSSEEEEECCSEETTEESBCSSCSSCSBCGGGC
T ss_pred CCHHHhccCCeeeeeeEEEccCCceeeeeccCCeEecccccHHHHhhccCeEEEEEcccCCCCCeeccCCCCcccCCCCC
Confidence 11000 0 2222222 11 1224678899999
Q ss_pred cEEEeeceeee-cCCCCHHHHHHHhHhcCCCCCHHHHHHHHHHhcC
Q psy11854 97 HYVVTEHGIAF-LFGKTLRQRAHALINIAPPDHREALEKAAFERLK 141 (141)
Q Consensus 97 ~~vVTEyG~a~-L~g~sl~erA~~lI~iAhP~~R~~L~~~a~~~~~ 141 (141)
||||||||+|+ |+|++++|||++| +||| +|||+|+++|++.++
T Consensus 439 ~~VVTE~Gva~~l~g~~l~Era~~l-~ia~-~~~~~L~~~a~~~~~ 482 (519)
T 2hj0_A 439 DVVVTEVGIAINPNRPDLIEYFKDL-KVPQ-LTIEELKEKAYAIVG 482 (519)
T ss_dssp CEEECSSCEEECTTCHHHHHHTTTC-SSCE-ECHHHHHHHHHHHHC
T ss_pred CEEECCCEEEECCCCCCHHHHHHHc-CCCc-ccHHHHHHHHHHhhC
Confidence 99999999999 9999999999999 9999 999999999987754
No 11
>3k6m_A Succinyl-COA:3-ketoacid-coenzyme A transferase 1, mitochondrial; SCOT, COA transferase, dynamic domain, glycerol, mitochondri transferase; 1.50A {Sus scrofa} PDB: 1m3e_A* 1o9l_A 1ooy_A 2nrc_A 2nrb_A 3oxo_A* 1ooz_A 1ope_A 3dlx_A
Probab=98.86 E-value=4.5e-10 Score=98.53 Aligned_cols=56 Identities=7% Similarity=-0.142 Sum_probs=39.4
Q ss_pred CCCCEEEEEeCCCCCcccC-CCccccC--cccEEEeeCC--CCCCC------------CCCCCChhhhhccce
Q psy11854 3 WRTAIATAQVNKYMPRTFG-DALVHQS--HFDFACQVDG--SLPLH------------PSKPPSPNEVAIGAG 58 (141)
Q Consensus 3 ~r~~~VIaeVNp~MPrt~G-d~~Ihis--~id~iVe~d~--pL~~~------------~~~~~~~~~~~IG~~ 58 (141)
..|++||+|||+.||+..+ ...||++ .||++||.+. +..+. +.+++.+.++.|+..
T Consensus 197 ~AA~~vIveVe~ivp~g~~~p~~v~ipgi~VD~VV~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Ia~r 269 (481)
T 3k6m_A 197 KAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKEEDVKTRSGKLGDNVRERIIKR 269 (481)
T ss_dssp TSEEEEEEEEEEEECTTSSCGGGCSBCGGGCCEEEECSCCCCCCSBCCCC---------------CHHHHHHH
T ss_pred HhCCeEEEEEeecccccccCCCeEEecchheEEEEECCCcCCcceeEeecccccccccCCCCCCCHHHHHHHH
Confidence 5678999999999999655 4789999 8999999874 44443 345577778888774
No 12
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=98.51 E-value=2.9e-08 Score=87.66 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=30.7
Q ss_pred CCEEEEEeCCCCCc-ccCCCccccC--cccEEEeeCC
Q psy11854 5 TAIATAQVNKYMPR-TFGDALVHQS--HFDFACQVDG 38 (141)
Q Consensus 5 ~~~VIaeVNp~MPr-t~Gd~~Ihis--~id~iVe~d~ 38 (141)
+++||+|||+.||+ +++...+||+ .+|++||.+.
T Consensus 219 gg~VIveVn~ivp~~~l~p~~v~Ipg~~VD~vV~~~~ 255 (531)
T 2ahu_A 219 GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPD 255 (531)
T ss_dssp TCEEEEEESEEECTTCSCGGGEEECGGGCSEEEECTT
T ss_pred CCEEEEEEcCCCCccccCCCceecchhhCeEEEecCC
Confidence 45999999999999 7888999999 9999999763
No 13
>1poi_A Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.2
Probab=97.71 E-value=4.2e-06 Score=69.43 Aligned_cols=56 Identities=5% Similarity=-0.087 Sum_probs=44.6
Q ss_pred CCCEEEEEeCCCCCc-cc--CCCccccC--cccEEEeeC---CCCCCCCC-----------CCCChhhhhcccee
Q psy11854 4 RTAIATAQVNKYMPR-TF--GDALVHQS--HFDFACQVD---GSLPLHPS-----------KPPSPNEVAIGAGV 59 (141)
Q Consensus 4 r~~~VIaeVNp~MPr-t~--Gd~~Ihis--~id~iVe~d---~pL~~~~~-----------~~~~~~~~~IG~~v 59 (141)
.|++||+|||+.||+ ++ +...|||+ .||++||.+ +|+...+. .++++.+..|+.++
T Consensus 203 aAk~VIveVe~ivp~g~l~~~p~~v~ipg~~VD~VV~~~~~~~p~~~~~~y~~D~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T 1poi_A 203 AAKYTIVTCEEIISDEEIRRDPTKNDIPGMCVDAVVLAPYGAHPSQCYGLYDYDNPFLKVYDKVSKTQEDFDAFC 277 (317)
T ss_dssp HSSEEEEEEEEECCHHHHHSSGGGCCBCGGGCCEEEECTTTTTTSBBTTTBCCCHHHHHHHHHHTTSHHHHHHHH
T ss_pred hCCEEEEEEcCCCCchhhcCCCceEEeChHHEEEEEEeCCCCCccccCCcccCCHHHHhhhcccCccHHHHHHHH
Confidence 578999999999999 67 45689999 999999987 57666655 45667777777754
No 14
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=97.42 E-value=4.7e-05 Score=60.87 Aligned_cols=35 Identities=9% Similarity=0.103 Sum_probs=31.6
Q ss_pred CCCEEEEEeCCCCCc-ccCCCccccC--cccEEEeeCC
Q psy11854 4 RTAIATAQVNKYMPR-TFGDALVHQS--HFDFACQVDG 38 (141)
Q Consensus 4 r~~~VIaeVNp~MPr-t~Gd~~Ihis--~id~iVe~d~ 38 (141)
.|++||+|||+.||+ +++...||++ .||++||.+.
T Consensus 184 aAk~VIveVn~~vp~g~l~p~~v~ipg~~VD~VV~~~~ 221 (241)
T 3cdk_A 184 AGKITIAEAEEIVEAGELDPDHIHTPGIYVQHVVLGAS 221 (241)
T ss_dssp HEEEEEEEEEEEECTTSSCTTTCSBCGGGCSEEEECCS
T ss_pred hCCEEEEEEeCCCCccccCCceEEeChHHeEEEEEcCC
Confidence 478999999999999 8888899998 9999999764
No 15
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=97.08 E-value=5.7e-05 Score=65.70 Aligned_cols=62 Identities=40% Similarity=0.549 Sum_probs=54.6
Q ss_pred cceeeecCCceeEEEcCCCeeeeecCcccCCccceeecCcccEEEeeceeeecCCCCHHHHHHHhHhcC-----CCCC
Q psy11854 56 GAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIA-----PPDH 128 (141)
Q Consensus 56 G~~vi~D~~~~h~vvt~~G~~f~~G~~l~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI~iA-----hP~~ 128 (141)
|+.++..+++.|+||||+|++.++|.++++++..++..+||+ |+..|.+.|+++-.+| ||+|
T Consensus 380 g~~v~t~~~~v~~iVTE~Gva~L~G~~~~era~~li~iAhp~-----------fr~~L~~~~~~~~~~~~~~~~~~~~ 446 (448)
T 3gk7_A 380 GAAVTTSRNDADYVVTEYGIAEMKGKSLQDRARALINIAHPD-----------FKDELKAEFEKRFNAAFSAWSHPQF 446 (448)
T ss_dssp TCCCSBCTTTCCEEEETTEEEECTTCCHHHHHHHHHHTSCGG-----------GHHHHHHHHHHHHSSCSSCCCCGGG
T ss_pred CCCceeCcCceEEEEeceEEEEccCCCHHHHHHHHHhcCCCc-----------CHHHHHHHHHHhhccceecccCccc
Confidence 444566688899999999999999999999999999999999 9999999999988754 6766
No 16
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=97.02 E-value=5.7e-05 Score=66.19 Aligned_cols=45 Identities=29% Similarity=0.324 Sum_probs=40.5
Q ss_pred eeEEEcCCCeeeeecCcccCCccceee-cCcccEEEeeceeeecCCCCHHHHHHHhH
Q psy11854 66 VHYVVTEHGIAFLFGKTLRQRAGVVTT-RAHVHYVVTEHGIAFLFGKTLRQRAHALI 121 (141)
Q Consensus 66 ~h~vvt~~G~~f~~G~~l~~ga~v~~~-r~~~~~vVTEyG~a~L~g~sl~erA~~lI 121 (141)
.|+||||||++.|+|.+++++|..+|. .+||| |+..|++.+++-.
T Consensus 429 v~~vVTE~Gva~LrG~s~~era~~lI~~iAhp~-----------~r~~L~~~~~~a~ 474 (514)
T 4eu9_A 429 AQIFVTEQGLADLRGLSPVQRAREIISKCAHPD-----------YRPMLQDYFDRAL 474 (514)
T ss_dssp CCEEEETTEEEECTTCCHHHHHHHHHHHTSCTT-----------THHHHHHHHHHHH
T ss_pred CCEEEcCCEEEEecCCCHHHHHHHHHHHcCCCC-----------cHHHHHHHHHHHH
Confidence 467999999999999999999999997 99999 9999998876543
No 17
>3rrl_B Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} PDB: 3cdk_B
Probab=96.82 E-value=0.0003 Score=55.34 Aligned_cols=43 Identities=14% Similarity=0.173 Sum_probs=35.5
Q ss_pred cceeecCcccEEEeeceeeecCCCCHHHHHHHhHhcCCCCCHHHHHHH
Q psy11854 88 GVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKA 135 (141)
Q Consensus 88 ~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI~iAhP~~R~~L~~~ 135 (141)
..+++|.++++||||||+++|+++ ...|++||..-..|++++.
T Consensus 156 ~~~t~~~~v~~vVTe~gV~~l~~~-----~l~L~eiapGv~~e~v~~~ 198 (207)
T 3rrl_B 156 LPLTGKGVVHQLITDLAVFEFSNN-----AMKLVELQEGVSLDQVKEK 198 (207)
T ss_dssp SCCSBSSCCSEEECSSEEEEEETT-----EEEEEEECTTCCHHHHHHH
T ss_pred ccCCCCCceEEEECCceEEEEcCC-----eEEEEEeCCCCCHHHHHHh
Confidence 345679999999999999999875 5789999887788887653
No 18
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=96.79 E-value=0.00014 Score=62.63 Aligned_cols=56 Identities=52% Similarity=0.729 Sum_probs=51.1
Q ss_pred cceeeecCCceeEEEcCCCeeeeecCcccCCccceeecCcccEEEeeceeeecCCCCHHHHHHHhHh
Q psy11854 56 GAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALIN 122 (141)
Q Consensus 56 G~~vi~D~~~~h~vvt~~G~~f~~G~~l~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI~ 122 (141)
|++++..+++.|+||||+|++.++|.++++++..++..+||| |+..|++.|+++-.
T Consensus 370 g~~v~t~~~~v~~vvTE~Gva~l~g~~~~era~~li~iAhp~-----------~r~~L~~~a~~~~~ 425 (436)
T 2oas_A 370 GAGVVTTRAHVHYIVTEYGAANLKGRSLRERAQALINIAHPD-----------FREQLSRDAFEVWG 425 (436)
T ss_dssp TCCEEECTTTCCEEEETTEEEECTTCCHHHHHHHHHTTSCHH-----------HHHHHHHHHHHTSC
T ss_pred CCCcccCcccCCEEECCCEEEECCCCCHHHHHHHhhcCCCcc-----------hHHHHHHHHHHhcc
Confidence 566777788999999999999999999999999999999999 99999999998754
No 19
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=96.66 E-value=0.00015 Score=63.33 Aligned_cols=51 Identities=37% Similarity=0.466 Sum_probs=46.0
Q ss_pred eeecCCceeEEEcCCCeeeeecCcccCCccceeecCcccEEEeeceeeecCCCCHHHHHHHh
Q psy11854 59 VVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHAL 120 (141)
Q Consensus 59 vi~D~~~~h~vvt~~G~~f~~G~~l~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~l 120 (141)
++..+++.|+||||+|++.++|.+++++|..+|..+||| |+..|.+.|+++
T Consensus 402 vtt~~~~v~~vvTE~Gva~l~G~s~~eRa~~lI~iAHPd-----------fR~~L~~~A~~~ 452 (455)
T 3qli_A 402 VTTPRIDTHYIVTEFGAVNLKGLSSTERALRIIELAHPD-----------FRDELTQAAKKM 452 (455)
T ss_dssp CSBCTTTCCEEEETTEEEECTTCCHHHHHHHHHTTSCHH-----------HHHHHHHHHHHT
T ss_pred cccCcccccEEEeccEEEECCCCCHHHHHHHHHHccCcc-----------hHHHHHHHHHHc
Confidence 344567779999999999999999999999999999999 999999999876
No 20
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=96.44 E-value=0.00037 Score=60.20 Aligned_cols=55 Identities=47% Similarity=0.598 Sum_probs=48.3
Q ss_pred cceeeecCCceeEEEcCCCeeeeecCcccCCccceeecCcccEEEeeceeeecCCCCHHHHHHHhH
Q psy11854 56 GAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALI 121 (141)
Q Consensus 56 G~~vi~D~~~~h~vvt~~G~~f~~G~~l~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI 121 (141)
|+.++..+++.|+||||+|++.++|.++++++..++..+||| |+..|.+.|++..
T Consensus 379 g~~v~~~~~~v~~vVTE~Gva~L~G~~~~Era~~li~iAhpd-----------fr~~L~~~a~~~~ 433 (434)
T 3eh7_A 379 GAAVTTLRNEVDYVVTEYGIAQLKGKSLRQRAEALIAIAHPD-----------FREELTKHLRKRF 433 (434)
T ss_dssp TCCEEECTTTCCEEEETTEEEECTTCCHHHHHHHHHTTSCHH-----------HHHHHHHHHHHHH
T ss_pred CCCceeCccceeEEEcccEEEECCCCCHHHHHHHHhcCCCCC-----------cHHHHHHHHHHhh
Confidence 344666677889999999999999999999999999999999 9999999998753
No 21
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=96.06 E-value=0.0028 Score=50.65 Aligned_cols=35 Identities=14% Similarity=0.131 Sum_probs=29.8
Q ss_pred CCCEEEEEeCCCCCcccC-CCccccC--cccEEEeeCC
Q psy11854 4 RTAIATAQVNKYMPRTFG-DALVHQS--HFDFACQVDG 38 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~G-d~~Ihis--~id~iVe~d~ 38 (141)
.|++||+|||+.||+... ...||++ .+|++||.+.
T Consensus 184 aA~~vIveve~iv~~g~l~p~~v~ipg~~VD~VV~~~~ 221 (235)
T 3rrl_A 184 AAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEK 221 (235)
T ss_dssp TEEEEEEEESEEECTTSSCTTTCSBCGGGCSEEEECSC
T ss_pred hcCEEEEEEeeccccCccCCceEEeChHHeEEEEECCC
Confidence 478999999999999554 4679999 7999999974
No 22
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=94.52 E-value=0.0024 Score=54.73 Aligned_cols=59 Identities=44% Similarity=0.553 Sum_probs=45.7
Q ss_pred cceeeecCCceeEEEcCCCeeeeecCcccCCccceeecCcccEEEeeceeeecCCCCHHHHHHHhHhcCC
Q psy11854 56 GAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAP 125 (141)
Q Consensus 56 G~~vi~D~~~~h~vvt~~G~~f~~G~~l~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI~iAh 125 (141)
|++++..++..++||||+|+..++|.++++++..++..+||+ |+..|.+.|+++-.+-|
T Consensus 376 g~~v~~~~~~v~~vVTE~gva~l~g~~l~e~a~~lI~iAhp~-----------fr~~L~~~a~~~~~~~~ 434 (439)
T 3d3u_A 376 GACVTTGRNEVDYVVTEYGVARLRGATLRQRAEALTAIAHPD-----------FRPALEEEIRRRFELEH 434 (439)
T ss_dssp -----CCSTTCSEEEETTEEEECTTCCHHHHHHHHHHHSCTT-----------HHHHHHHHHHTTC----
T ss_pred CCCceeCCCcceEEECCCEEEEeCCCCHHHHHHHHHhhcCCC-----------CHHHHHHHHHHcCchhh
Confidence 345556677889999999999999999999998889999999 99999999988765544
No 23
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=94.35 E-value=0.0043 Score=54.35 Aligned_cols=53 Identities=13% Similarity=0.101 Sum_probs=45.0
Q ss_pred CCCEEEEEeCCCCCccc---------------------------CCCcc--ccCcccEEEeeCCCCCCCCCCCCChhhhh
Q psy11854 4 RTAIATAQVNKYMPRTF---------------------------GDALV--HQSHFDFACQVDGSLPLHPSKPPSPNEVA 54 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~---------------------------Gd~~I--his~id~iVe~d~pL~~~~~~~~~~~~~~ 54 (141)
.|++||+|||+.||+++ |++.| |.++||++||+|.|+++.+..++++++++
T Consensus 156 aA~~VIvEVn~~vP~~~~g~hd~~~~~~~P~~~~ip~~~~~~r~G~~~i~i~~~~Vd~IVe~~~p~~~~~~~~~~~~~~~ 235 (497)
T 2g39_A 156 FAKQVIVEINLAHSTNLEGLHDIYIPTYRPTRTPIPLTRVDDRIGSTAIPIPPEKIVAIVINDQPDSPSTVLPPDGETQA 235 (497)
T ss_dssp HSSEEEEEEETTSCGGGTTSBCBCCCCCTTSCCCCCCCSTTCCCSBSSBCCCGGGEEEEEEECCCCCCCCCCCCCHHHHH
T ss_pred hCCeEEEEEcCCCCcccccccccccccCCcccccccccccccccCCccccCChhHEEEEEEcCCCccccCCCCCChHHHH
Confidence 57899999999999986 67764 44899999999999988887788887777
Q ss_pred cc
Q psy11854 55 IG 56 (141)
Q Consensus 55 IG 56 (141)
||
T Consensus 236 Ia 237 (497)
T 2g39_A 236 IA 237 (497)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 24
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=93.50 E-value=0.031 Score=45.09 Aligned_cols=23 Identities=30% Similarity=0.293 Sum_probs=19.1
Q ss_pred cceeecCcccEEEeeceeeecCCC
Q psy11854 88 GVVTTRAHVHYVVTEHGIAFLFGK 111 (141)
Q Consensus 88 ~v~~~r~~~~~vVTEyG~a~L~g~ 111 (141)
+++..| ++++||||||+++|.++
T Consensus 179 ~~t~~r-~~~~vVTe~gV~~~~~~ 201 (260)
T 1poi_B 179 GLPGDV-GPQLVVTDKGILKFDEK 201 (260)
T ss_dssp TCCTTC-CEEEEEETTEEEEECTT
T ss_pred ccccCC-CCCEEEeCceEEEecCC
Confidence 444445 99999999999999987
No 25
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=92.08 E-value=0.012 Score=51.59 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=46.0
Q ss_pred CCCEEEEEeCCCCCccc---------------------------CCCcc--ccCcccEEEeeCCCCCCCCCCCCChhhhh
Q psy11854 4 RTAIATAQVNKYMPRTF---------------------------GDALV--HQSHFDFACQVDGSLPLHPSKPPSPNEVA 54 (141)
Q Consensus 4 r~~~VIaeVNp~MPrt~---------------------------Gd~~I--his~id~iVe~d~pL~~~~~~~~~~~~~~ 54 (141)
.|++||+|||+.||+++ |++.| |.++||++||+|.|+++.+..++++++++
T Consensus 151 aA~~VIveVn~~vP~~~~g~~d~~~~~~~P~~~~Ip~~~~~~r~G~~~i~i~~~~Vd~VVe~~~p~~~~~~~~~~~~~~~ 230 (506)
T 2nvv_A 151 LADRIIVELNDKHPKEIMGMHDLCEPLDPPARRELPVYTPSDRIGKPYVQVDPAKIVGVVRTSEPNDESDFAPLDPVTQA 230 (506)
T ss_dssp HCSEEEEEEETTSCGGGTTSBCBCCCCCTTSCCCCCCSSTTCCCSBSSEECCGGGEEEEEEECCCCCCCCCCCCCHHHHH
T ss_pred hCCcEEEEECCCCCcccccccccccccCCcccccccccccccccCCccccCChHHEEEEEEcCCCccccCCCCCChHHHH
Confidence 57899999999999986 66774 45899999999999998888888988888
Q ss_pred cc
Q psy11854 55 IG 56 (141)
Q Consensus 55 IG 56 (141)
||
T Consensus 231 Ia 232 (506)
T 2nvv_A 231 IG 232 (506)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 26
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=85.32 E-value=0.098 Score=45.90 Aligned_cols=51 Identities=29% Similarity=0.252 Sum_probs=41.8
Q ss_pred cCCceeEEEcCCCeee-eecCcccCCccceeecCcccEEEeeceeeecCCCCHHHHHHHhHhcCC
Q psy11854 62 TRAHVHYVVTEHGIAF-LFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAP 125 (141)
Q Consensus 62 D~~~~h~vvt~~G~~f-~~G~~l~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI~iAh 125 (141)
.+++.|+||||+|+.. ++|.++.+++..+ ..+| . +...|+++|+++..+..
T Consensus 430 ~~~~V~~iVTE~Gva~~l~g~~l~Era~~l-~iAh-~-----------~~e~L~~~a~~~~~~p~ 481 (509)
T 1xr4_A 430 PGASVDVLVTDHGIAVNPARQDLLDNLRAA-GVAL-M-----------TIEQLQQRAEQLTGKPQ 481 (509)
T ss_dssp CGGGCCEEEETTEEEECTTCHHHHHHHHHT-TCCC-B-----------CHHHHHHHHHHHHCCCC
T ss_pred CcCeeCEEECCcEEEEcCCCCCHHHHhhcc-CCCc-C-----------CHHHHHHHHHHhhCCCc
Confidence 3566788999999888 9999999988877 7777 5 57789999999887743
No 27
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=85.29 E-value=0.15 Score=44.77 Aligned_cols=51 Identities=24% Similarity=0.175 Sum_probs=42.5
Q ss_pred cCCceeEEEcCCCeee-eecCcccCCccceeecCcccEEEeeceeeecCCCCHHHHHHHhHhcCC
Q psy11854 62 TRAHVHYVVTEHGIAF-LFGKTLRQRAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAP 125 (141)
Q Consensus 62 D~~~~h~vvt~~G~~f-~~G~~l~~ga~v~~~r~~~~~vVTEyG~a~L~g~sl~erA~~lI~iAh 125 (141)
.+.+.++||||+|+.. ++|.++.+++..+ ..+| + +...|+++|+++..+..
T Consensus 434 ~~~~V~~VVTE~Gva~~l~g~~l~Era~~l-~ia~-~-----------~~~~L~~~a~~~~~~~~ 485 (519)
T 2hj0_A 434 PGTSVDVVVTEVGIAINPNRPDLIEYFKDL-KVPQ-L-----------TIEELKEKAYAIVGNPQ 485 (519)
T ss_dssp CGGGCCEEECSSCEEECTTCHHHHHHTTTC-SSCE-E-----------CHHHHHHHHHHHHCSCC
T ss_pred CCCCCCEEECCCEEEECCCCCCHHHHHHHc-CCCc-c-----------cHHHHHHHHHHhhCCCc
Confidence 3556688999999888 9999999988877 7777 7 88899999999987743
No 28
>3c8l_A FTSZ-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.22A {Nostoc punctiforme}
Probab=28.80 E-value=61 Score=23.33 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=25.3
Q ss_pred cEEEeecee-eecCCCCHHHHHHHhHh--cCC---CCCHH
Q psy11854 97 HYVVTEHGI-AFLFGKTLRQRAHALIN--IAP---PDHRE 130 (141)
Q Consensus 97 ~~vVTEyG~-a~L~g~sl~erA~~lI~--iAh---P~~R~ 130 (141)
..+++|+|. .||+|++..+.|.+-+. |.| |.+++
T Consensus 5 kr~~iEmGmG~DlhGqD~TkAA~RAvrDAI~~nslp~~~~ 44 (122)
T 3c8l_A 5 KRLIIEMGMGIDQHGQEPTIAASRAVRNAIAHNALPGVWE 44 (122)
T ss_dssp EEEEEEEEEEEESSSSCHHHHHHHHHHHHHTTCCCSSHHH
T ss_pred EEEEEEecccccccCccHHHHHHHHHHHHHhhhcchhHHH
Confidence 468899998 79999998877775554 656 55554
Done!