BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11857
(129 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340713996|ref|XP_003395519.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Bombus terrestris]
Length = 702
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/116 (87%), Positives = 108/116 (93%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 17 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 76
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGVAALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 77 TRETGAFRCPICRELITIPRGGVAALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 132
>gi|350400611|ref|XP_003485898.1| PREDICTED: tripartite motif-containing protein 2-like [Bombus
impatiens]
Length = 932
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/116 (87%), Positives = 108/116 (93%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 247 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 306
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGVAALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 307 TRETGAFRCPICRELITIPRGGVAALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 362
>gi|340713994|ref|XP_003395518.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Bombus terrestris]
Length = 927
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/116 (87%), Positives = 108/116 (93%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 242 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 301
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGVAALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 302 TRETGAFRCPICRELITIPRGGVAALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 357
>gi|328780417|ref|XP_392730.4| PREDICTED: tripartite motif-containing protein 2-like [Apis
mellifera]
Length = 927
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 107/116 (92%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 242 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 301
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 302 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 357
>gi|380025130|ref|XP_003696332.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2-like [Apis florea]
Length = 927
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 107/116 (92%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 242 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 301
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 302 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 357
>gi|383862071|ref|XP_003706507.1| PREDICTED: tripartite motif-containing protein 2-like [Megachile
rotundata]
Length = 936
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 107/116 (92%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 251 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 310
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 311 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 366
>gi|91092518|ref|XP_969733.1| PREDICTED: similar to NHL (ring finger b-box coiled coil) domain
containing family member (nhl-3) [Tribolium castaneum]
gi|270012903|gb|EFA09351.1| hypothetical protein TcasGA2_TC001677 [Tribolium castaneum]
Length = 685
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 108/116 (93%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S NSTLVETVSINYEDFNESFLTCGTCLCMYDG EHTPKLL CSHTVCLHCL++IAASQ
Sbjct: 2 VSMNSTLVETVSINYEDFNESFLTCGTCLCMYDGNEHTPKLLQCSHTVCLHCLTKIAASQ 61
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TR+TG+ RCPICRE ITIPRGGV+ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 62 TRDTGSFRCPICRELITIPRGGVSALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 117
>gi|307203608|gb|EFN82637.1| Chymotrypsin-1 [Harpegnathos saltator]
Length = 987
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 107/116 (92%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 302 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 361
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGV+ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 362 TRETGAFRCPICRELITIPRGGVSALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 417
>gi|307180992|gb|EFN68766.1| Tripartite motif-containing protein 2 [Camponotus floridanus]
Length = 687
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 106/116 (91%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 2 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 61
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 62 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 117
>gi|242022977|ref|XP_002431913.1| RING finger-containing protein, putative [Pediculus humanus
corporis]
gi|212517257|gb|EEB19175.1| RING finger-containing protein, putative [Pediculus humanus
corporis]
Length = 687
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/116 (85%), Positives = 107/116 (92%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+ +STLVETVSINYEDFNESFLTCGTCLCMYDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 2 IGMSSTLVETVSINYEDFNESFLTCGTCLCMYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 61
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TR+ GT RCPICR+ ITIPRGGV+ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 62 TRDNGTFRCPICRKLITIPRGGVSALPPSFLVNQLLDLMSRQRREVIPKCSIHLTQ 117
>gi|211065505|ref|NP_001127784.2| tripartite motif-containing 2 protein-like [Nasonia vitripennis]
Length = 700
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/116 (85%), Positives = 105/116 (90%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 15 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 74
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TRE G RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +Q
Sbjct: 75 TREAGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQ 130
>gi|357612543|gb|EHJ68051.1| tripartite motif-containing 2 protein-like protein [Danaus
plexippus]
Length = 678
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/112 (86%), Positives = 105/112 (93%)
Query: 10 STNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT 69
S +STLVETVSINYEDFNESFLTCGTCLC YDGGEHTPKLLPCSHTVCLHCL+RIAASQT
Sbjct: 3 SMSSTLVETVSINYEDFNESFLTCGTCLCTYDGGEHTPKLLPCSHTVCLHCLTRIAASQT 62
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
R+ G+ RCPICRE ITIPRGGV ALPPSFLVNQLLDLM+RQRR +IP+CS+H
Sbjct: 63 RDAGSFRCPICRELITIPRGGVPALPPSFLVNQLLDLMARQRREVIPQCSSH 114
>gi|443724778|gb|ELU12631.1| hypothetical protein CAPTEDRAFT_185576 [Capitella teleta]
Length = 678
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 96/113 (84%), Gaps = 1/113 (0%)
Query: 12 NSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE 71
+STLVETVSI+YEDFNESFLTCGTCLC+YD +H PK+LPCSHTVC CL RI +Q +
Sbjct: 2 SSTLVETVSIDYEDFNESFLTCGTCLCIYDSQQHNPKILPCSHTVCRSCLERIVEAQGTD 61
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ RCPICRE I+IPRGGV +LPPSF+VNQL+DLM+RQRR +IPKC+ H+S+
Sbjct: 62 N-SFRCPICRETISIPRGGVVSLPPSFIVNQLIDLMARQRRDVIPKCAVHSSE 113
>gi|427793477|gb|JAA62190.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 689
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 93/112 (83%), Gaps = 1/112 (0%)
Query: 11 TNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQT 69
T+STLVETVS+NYEDF+E+FLTC TCLC YDG E +PKLL CSHTVC CL R+ AA+++
Sbjct: 10 TSSTLVETVSLNYEDFSENFLTCSTCLCTYDGQERSPKLLSCSHTVCRSCLERLAAAARS 69
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
+ GTLRCPICRE + +P GV ALPPSFLVNQLLDL++ +RR ++PKC+ H
Sbjct: 70 QHEGTLRCPICREAVPLPEPGVGALPPSFLVNQLLDLVASRRREVVPKCALH 121
>gi|324503424|gb|ADY41491.1| Tripartite motif-containing protein 2 [Ascaris suum]
Length = 693
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRE 71
STLVETV+IN EDF+ESFLTC TCLC YD + KLLPCSHTVCL CL R+A Q E
Sbjct: 3 STLVETVNINLEDFSESFLTCATCLCTYDQEKRRAKLLPCSHTVCLRCLERMAQMPQVLE 62
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TGT+RCP+CRE +P GG P SFL+NQLLDLM +QRR ++P C+ H +
Sbjct: 63 TGTMRCPMCREMAMLPVGGANGFPSSFLINQLLDLMQKQRRDVVPNCAVHQQE 115
>gi|308487146|ref|XP_003105769.1| CRE-NHL-3 protein [Caenorhabditis remanei]
gi|308255225|gb|EFO99177.1| CRE-NHL-3 protein [Caenorhabditis remanei]
Length = 691
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 64/116 (55%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-S 67
++T+++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL+C++++A S
Sbjct: 1 MTTSTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLYCVTQLAGLS 60
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNS 123
TLRCP+CRE IP GGV + P +F +NQLLD+M RQR+ ++P CS H S
Sbjct: 61 AETIPPTLRCPLCREICPIPAGGVISFPAAFFINQLLDVMQRQRKDVVPSCSNHPS 116
>gi|341896875|gb|EGT52810.1| CBN-NHL-3 protein [Caenorhabditis brenneri]
Length = 691
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 64/116 (55%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-S 67
+S +++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL C++++A S
Sbjct: 1 MSASTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLSCVTQLAELS 60
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNS 123
T+RCP+CRE TIP GGV + P +F +NQLLD+M RQR+ ++P CS H S
Sbjct: 61 PETVPPTVRCPLCREICTIPAGGVISFPAAFFINQLLDVMQRQRKDVVPSCSNHPS 116
>gi|402585476|gb|EJW79416.1| hypothetical protein WUBG_09673, partial [Wuchereria bancrofti]
Length = 142
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRE 71
ST +ETV+IN EDF+E+FLTC TCLC YD KLL CSHTVCL CL R+ Q E
Sbjct: 10 STFIETVNINLEDFSETFLTCATCLCTYDQERKKAKLLSCSHTVCLECLLRMEQLPQVIE 69
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TG +RCP+CRE ITIP GG A P SFL+NQLLDLM +QR+ ++P CS H +
Sbjct: 70 TGVVRCPLCREMITIPSGGSNAFPSSFLINQLLDLMQKQRKDVVPNCSVHQQE 122
>gi|358337517|dbj|GAA55865.1| tripartite motif-containing protein 2/3 [Clonorchis sinensis]
Length = 969
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
S LVETV IN +DF +SFLTCGTC YD E KLLPCSHTVC CL RI +Q++ T
Sbjct: 14 SRLVETVMINVDDFADSFLTCGTCFTGYDTCERAAKLLPCSHTVCRSCLDRILETQSQAT 73
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+LRCPICRE I +P GG ++ PP+F+VNQLLDL++ QRR ++PKC H +Q
Sbjct: 74 -SLRCPICREDIPVPAGGASSFPPAFIVNQLLDLLATQRRDVVPKCRIHPNQ 124
>gi|328717732|ref|XP_003246291.1| PREDICTED: hypothetical protein LOC100569367 [Acyrthosiphon pisum]
Length = 796
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 89/137 (64%), Gaps = 33/137 (24%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT----- 69
LVETVSI+Y+DFN++FLTC TCLC+YDG E PKLLPCSHTVC+HCL+RIAA+
Sbjct: 19 LVETVSIDYDDFNDAFLTCATCLCVYDGVERAPKLLPCSHTVCVHCLTRIAAAANNRRTT 78
Query: 70 ------RETG--------------------TLRCPICREQITIPR-GGVAALPPSFLVNQ 102
R +G T RCPICRE I +P+ GGV ALPPSFLVNQ
Sbjct: 79 QDLNNGRGSGSNTIQSQQQQESQTAQQQRQTFRCPICRELIVVPQNGGVTALPPSFLVNQ 138
Query: 103 LLDLMSRQRRH-IIPKC 118
LLDL+S RR +IP C
Sbjct: 139 LLDLISTHRRRTLIPTC 155
>gi|353230193|emb|CCD76364.1| putative ring finger-containing [Schistosoma mansoni]
Length = 897
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
S LVETV IN +DF ++FLTCGTC Y+ E KLLPCSHT+C CL RI S+T ++
Sbjct: 3 SRLVETVMINVDDFADNFLTCGTCFSGYNSSERAAKLLPCSHTICRSCLDRILTSET-QS 61
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
T RCPICRE I IP GG A+ PP+F+VNQLLDL++ RR ++PKC H SQ
Sbjct: 62 ETFRCPICRENIAIPSGGAASFPPAFIVNQLLDLLATHRRDVVPKCCIHPSQ 113
>gi|256072193|ref|XP_002572421.1| ring finger-containing [Schistosoma mansoni]
Length = 897
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
S LVETV IN +DF ++FLTCGTC Y+ E KLLPCSHT+C CL RI S+T ++
Sbjct: 3 SRLVETVMINVDDFADNFLTCGTCFSGYNSSERAAKLLPCSHTICRSCLDRILTSET-QS 61
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
T RCPICRE I IP GG A+ PP+F+VNQLLDL++ RR ++PKC H SQ
Sbjct: 62 ETFRCPICRENIAIPSGGAASFPPAFIVNQLLDLLATHRRDVVPKCCIHPSQ 113
>gi|268534176|ref|XP_002632218.1| C. briggsae CBR-NHL-3 protein [Caenorhabditis briggsae]
Length = 405
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 89/119 (74%), Gaps = 3/119 (2%)
Query: 8 TLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-- 65
T +T+++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL+C++++A
Sbjct: 5 TTTTSTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLYCVTQLAEL 64
Query: 66 ASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
A +T T+RCP+CRE IP GGV A P +F +NQLLD+M RQR+ ++P CS H S
Sbjct: 65 APETI-PPTIRCPLCREICAIPHGGVIAFPAAFFINQLLDVMQRQRKDVVPSCSNHPSD 122
>gi|392888962|ref|NP_001040817.2| Protein NHL-3, isoform a [Caenorhabditis elegans]
gi|351064887|emb|CCD73637.1| Protein NHL-3, isoform a [Caenorhabditis elegans]
Length = 698
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 62/112 (55%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 11 TNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQT 69
T+++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL C++++A S
Sbjct: 3 TSTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLFCVTQLAELSPE 62
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
+ TLRCP+CRE IP GGV P +F +NQLLD+M QR+ ++P CS H
Sbjct: 63 TQPPTLRCPLCREVCPIPAGGVILFPAAFFINQLLDVMQIQRKDVVPSCSNH 114
>gi|312085321|ref|XP_003144632.1| nhl domain-containing protein 3 [Loa loa]
gi|307760204|gb|EFO19438.1| nhl domain-containing protein 3 [Loa loa]
Length = 704
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRE 71
ST +ETV+IN EDF+E+FLTC TCLC YD KLL CSHTVCL CL R+ Q E
Sbjct: 10 STFIETVNINLEDFSETFLTCATCLCTYDQERKKAKLLSCSHTVCLECLLRMEQLPQVIE 69
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TG +RCP+CRE IT+P G A P SFL+NQLLDLM +Q + +IP CS H +
Sbjct: 70 TGIVRCPLCREMITLPSDGSNAFPSSFLINQLLDLMQKQHKDVIPNCSIHQQE 122
>gi|241998980|ref|XP_002434133.1| RING finger-containing protein, putative [Ixodes scapularis]
gi|215495892|gb|EEC05533.1| RING finger-containing protein, putative [Ixodes scapularis]
Length = 714
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 34 GTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQTRETGTLRCPICREQITIPRGGVA 92
GTCLC YDGGE +PKLL CSHTVC CL R+A A+ RE G LRCPICRE + +P GV
Sbjct: 151 GTCLCTYDGGERSPKLLSCSHTVCRSCLERLAVATGAREGGCLRCPICREAVPLPEPGVG 210
Query: 93 ALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
ALPPSFLVNQLLDL++ +RR ++PKC+TH
Sbjct: 211 ALPPSFLVNQLLDLVASRRREVVPKCATH 239
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 11 TNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS 67
T STLVETVS+NYEDF+ESFLTC TCLC YDGGE +PKLL CSHT L CL+++ A+
Sbjct: 297 TASTLVETVSLNYEDFSESFLTCSTCLCTYDGGERSPKLLSCSHTAQL-CLNKLDAA 352
>gi|170590850|ref|XP_001900184.1| Nhl domain containing protein 3 [Brugia malayi]
gi|158592334|gb|EDP30934.1| Nhl domain containing protein 3, putative [Brugia malayi]
Length = 678
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQI 84
F+E+FLTC TCLC YD + KLL CSHTVCL CL + Q ETG +RCP+CRE I
Sbjct: 22 FSETFLTCATCLCTYDQEQKKAKLLSCSHTVCLECLLHMEQLPQVIETGVVRCPLCREMI 81
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
TIP GG A P SFL+NQLLDLM +QR+ ++P CS H +
Sbjct: 82 TIPSGGSNAFPSSFLINQLLDLMQKQRKDVVPNCSVHQQE 121
>gi|260805102|ref|XP_002597426.1| hypothetical protein BRAFLDRAFT_80577 [Branchiostoma floridae]
gi|229282691|gb|EEN53438.1| hypothetical protein BRAFLDRAFT_80577 [Branchiostoma floridae]
Length = 800
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
++ T S+ +EDF+E FLTC C +Y P++LPC HT C CL + +++ T
Sbjct: 75 IMATASLPFEDFDEKFLTCPVCEEIYTD----PRVLPCLHTYCARCLEKWRNGESQFT-- 128
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
CP CR Q+ + GV++LPP+F +N LLD +
Sbjct: 129 --CPTCRHQVRLQGTGVSSLPPNFFINSLLDFRA 160
>gi|426255372|ref|XP_004021323.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM56
[Ovis aries]
Length = 724
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QVPKTLPCLHTYCQDCLAQLA-----EGGRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
+ +P GVAA +F VN LLDL+ RR P C+
Sbjct: 63 VPLPPTGVAAFKTNFFVNGLLDLVKAXRRAGKPACA 98
>gi|260816735|ref|XP_002603243.1| hypothetical protein BRAFLDRAFT_93307 [Branchiostoma floridae]
gi|229288561|gb|EEN59254.1| hypothetical protein BRAFLDRAFT_93307 [Branchiostoma floridae]
Length = 877
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC CL + P++LPC HT C CL R A Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCLLYF----RDPRVLPCLHTFCKECLQRWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
++P GV L +F VN LLD ++ ++ P C+
Sbjct: 62 SLPDHGVDGLRGNFYVNNLLDFVA-AKKGAQPDCA 95
>gi|260835653|ref|XP_002612822.1| hypothetical protein BRAFLDRAFT_67230 [Branchiostoma floridae]
gi|229298203|gb|EEN68831.1| hypothetical protein BRAFLDRAFT_67230 [Branchiostoma floridae]
Length = 601
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ LTCG CL + TPKLLPC HT C CL R R + CP+CR Q+ IP
Sbjct: 20 DELLTCGICLEDFK----TPKLLPCGHTFCQACLERY----VRGASDMTCPVCRRQVAIP 71
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRR 112
GV ALP +F V + +L+ QRR
Sbjct: 72 PEGVGALPGNFWVGNVRELLRGQRR 96
>gi|260811704|ref|XP_002600562.1| hypothetical protein BRAFLDRAFT_205186 [Branchiostoma floridae]
gi|229285849|gb|EEN56574.1| hypothetical protein BRAFLDRAFT_205186 [Branchiostoma floridae]
Length = 686
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C+ CL A Q L CP CR Q+
Sbjct: 9 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCMECLQEWATKQQ----PLECPTCRTQV 60
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN LLD + ++
Sbjct: 61 SLPDQGVDGLRTNFYVNNLLDFAAAKK 87
>gi|260826079|ref|XP_002607993.1| hypothetical protein BRAFLDRAFT_213530 [Branchiostoma floridae]
gi|229293343|gb|EEN64003.1| hypothetical protein BRAFLDRAFT_213530 [Branchiostoma floridae]
Length = 728
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQSCLERLLA--TEPAGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+PR GV L +FLV +L D++ +Q
Sbjct: 62 ALPRNGVQGLKSNFLVGKLRDILQQQ 87
>gi|260792736|ref|XP_002591370.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
gi|229276575|gb|EEN47381.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
Length = 690
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHII 115
++P GV L +F VN LLD + + H I
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKEGHQI 92
>gi|321471267|gb|EFX82240.1| hypothetical protein DAPPUDRAFT_241481 [Daphnia pulex]
Length = 530
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F+TCG C C YD G+ PK L CSHTVCL CL I R T+ CP CR+ T
Sbjct: 8 EDFITCGVCFCEYDHGDRKPKFLQCSHTVCLSCLKGI-----RHGDTIACPFCRD--TFV 60
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
+ V +LP + LL L + ++++PK S
Sbjct: 61 KFDVESLPNNAYAFYLLKL---KEKNVLPKLS 89
>gi|260811452|ref|XP_002600436.1| hypothetical protein BRAFLDRAFT_99626 [Branchiostoma floridae]
gi|229285723|gb|EEN56448.1| hypothetical protein BRAFLDRAFT_99626 [Branchiostoma floridae]
Length = 721
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FLTC C+ + P++LPC HT C CL AA Q L CP CR Q
Sbjct: 9 DDFDELFLTCSICMRHF----QDPRVLPCLHTFCRECLQERAAKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+++P GV L +F VN LLD + ++
Sbjct: 61 VSLPDQGVDGLKTNFYVNNLLDFAAAKK 88
>gi|260812231|ref|XP_002600824.1| hypothetical protein BRAFLDRAFT_75885 [Branchiostoma floridae]
gi|229286114|gb|EEN56836.1| hypothetical protein BRAFLDRAFT_75885 [Branchiostoma floridae]
Length = 662
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL R+ A++ R G L CP CR+ +
Sbjct: 8 EITDEFLVCQICLEDF----RQPKMLPCLHTFCQPCLERLLATEPR-VGKLNCPTCRQDV 62
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
+P GV L +FLV +L D++ +Q R K T Q K+L
Sbjct: 63 PLPESGVQGLKSNFLVGKLHDILQQQTR---GKEDTDEPQAKRL 103
>gi|260795691|ref|XP_002592838.1| hypothetical protein BRAFLDRAFT_201537 [Branchiostoma floridae]
gi|229278062|gb|EEN48849.1| hypothetical protein BRAFLDRAFT_201537 [Branchiostoma floridae]
Length = 683
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D +E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 8 DLDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 59
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRH 113
++P GV L +F VN LLD + ++ H
Sbjct: 60 SLPDQGVDGLRTNFYVNNLLDFAAAKKDH 88
>gi|260807305|ref|XP_002598449.1| hypothetical protein BRAFLDRAFT_83265 [Branchiostoma floridae]
gi|229283722|gb|EEN54461.1| hypothetical protein BRAFLDRAFT_83265 [Branchiostoma floridae]
Length = 974
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FLTC C+ + ++LPC HT C CL A+ Q L CP CR Q
Sbjct: 8 DDFDEQFLTCPVCMLHF----RDARILPCLHTFCKQCLQEWASKQD----PLECPTCRTQ 59
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+++P GV L +F VN LLD + ++R
Sbjct: 60 VSLPDQGVDGLKTNFYVNNLLDFAAVKKR 88
>gi|260828566|ref|XP_002609234.1| hypothetical protein BRAFLDRAFT_90688 [Branchiostoma floridae]
gi|229294589|gb|EEN65244.1| hypothetical protein BRAFLDRAFT_90688 [Branchiostoma floridae]
Length = 725
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FL C C+ + PK+LPC HT C CL A Q L CP CR Q
Sbjct: 7 DDFDEQFLACPVCMLHF----RDPKILPCLHTFCRECLQEWATKQQ----PLECPTCRTQ 58
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+++P GV L +F VN LLD + ++
Sbjct: 59 VSLPDQGVDGLRTNFYVNNLLDFAAAKK 86
>gi|260826075|ref|XP_002607991.1| hypothetical protein BRAFLDRAFT_213581 [Branchiostoma floridae]
gi|229293341|gb|EEN64001.1| hypothetical protein BRAFLDRAFT_213581 [Branchiostoma floridae]
Length = 755
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDF----RQPKVLPCLHTFCQPCLDRLLA--TEPAGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+P GV L +FLV +L D++ +Q PK T ++
Sbjct: 62 PLPENGVQGLKSNFLVGKLRDILQQQ-----PKGETSQAR 96
>gi|344289795|ref|XP_003416626.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like [Loxodonta
africana]
Length = 756
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QVPKTLPCLHTYCQACLAQLA-----EGGHLRCPECREV 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GGVAA +F VN LLDL++
Sbjct: 63 VPVPPGGVAAFKTNFFVNGLLDLVT 87
>gi|260811450|ref|XP_002600435.1| hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae]
gi|229285722|gb|EEN56447.1| hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae]
Length = 722
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ +FNE FLTC C+ + P++LPC HT C CL Q L CP CR
Sbjct: 8 FTEFNEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWTTKQQ----PLECPTCRT 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQR 111
Q+++P GV L +F VN LLD ++ ++
Sbjct: 60 QVSLPDQGVDGLRTNFFVNNLLDFVAAKK 88
>gi|260792728|ref|XP_002591366.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
gi|229276571|gb|EEN47377.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
Length = 678
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A+ Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWASKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHI 114
++P GV L +F VN LLD + + ++
Sbjct: 62 SLPDPGVDGLRTNFYVNNLLDFAAVKEENL 91
>gi|379991152|ref|NP_001244016.1| E3 ubiquitin-protein ligase TRIM56 [Equus caballus]
Length = 771
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E N FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALNSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----EDGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260809305|ref|XP_002599446.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
gi|229284725|gb|EEN55458.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
Length = 684
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++F++ FLTC C ++ PK+LPC HT C CL + + + CP CR +
Sbjct: 8 QEFDQEFLTCPVCNKLF----CEPKILPCLHTFCKTCLEKWMKQK------VSCPFCRTK 57
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP 116
+T+P GV+ LP +F +N+LLD Q+ +P
Sbjct: 58 VTLPSEGVSGLPTNFNINKLLDFRKLQKSKNLP 90
>gi|260782668|ref|XP_002586406.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
gi|229271513|gb|EEN42417.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
Length = 684
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++F++ FLTC C ++ PK+LPC HT C CL + + + CP CR +
Sbjct: 8 QEFDQEFLTCPVCNKLF----CEPKILPCLHTFCKTCLEKWMKQK------VSCPFCRTK 57
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP 116
+T+P GV+ LP +F +N+LLD Q+ +P
Sbjct: 58 VTLPSEGVSGLPTNFNINKLLDFRKLQKSKNLP 90
>gi|260825327|ref|XP_002607618.1| hypothetical protein BRAFLDRAFT_71500 [Branchiostoma floridae]
gi|229292966|gb|EEN63628.1| hypothetical protein BRAFLDRAFT_71500 [Branchiostoma floridae]
Length = 618
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ E FLTC C+ +Y PK+LPC HT C CL R AA ++ +L CP CR +
Sbjct: 10 EEIREEFLTCSICMEVY----TRPKMLPCVHTFCQRCLERFAAGKS----SLACPTCRRE 61
Query: 84 ITIPRGGVAALPPSFLVNQL 103
+T+P GGV AL +F + L
Sbjct: 62 VTLPVGGVQALTDNFYIASL 81
>gi|260792738|ref|XP_002591371.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
gi|229276576|gb|EEN47382.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
Length = 653
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+F+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 NFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN LLD + ++
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKK 88
>gi|260792732|ref|XP_002591368.1| hypothetical protein BRAFLDRAFT_93989 [Branchiostoma floridae]
gi|229276573|gb|EEN47379.1| hypothetical protein BRAFLDRAFT_93989 [Branchiostoma floridae]
Length = 663
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN LLD + ++
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKK 88
>gi|260824439|ref|XP_002607175.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
gi|229292521|gb|EEN63185.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
Length = 720
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF++ FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 4 DFDDQFLTCPVCMLHF----RDPRILPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 55
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN LLD + ++
Sbjct: 56 SLPDQGVDGLRTNFYVNNLLDFAAAKK 82
>gi|321471408|gb|EFX82381.1| hypothetical protein DAPPUDRAFT_316827 [Daphnia pulex]
Length = 521
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT-- 85
E F+TCG CL YD PK LPCSHTVCL CL I R T+ CP CR+ +T
Sbjct: 10 EDFVTCGVCLWEYDEEIRKPKFLPCSHTVCLECLKEI-----RRADTITCPFCRKVVTKD 64
Query: 86 -IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIK 126
G LP +F QLL L ++ + + + NS +K
Sbjct: 65 VTSPGAEWILPNNFYALQLLKL---NKQKAVSRSNEANSPLK 103
>gi|260815579|ref|XP_002602550.1| hypothetical protein BRAFLDRAFT_227285 [Branchiostoma floridae]
gi|229287861|gb|EEN58562.1| hypothetical protein BRAFLDRAFT_227285 [Branchiostoma floridae]
Length = 680
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF++ FL+C C+ + P++LPC HT C CL A Q L CP CR Q
Sbjct: 4 DDFDDQFLSCPVCMLHF----RDPRVLPCLHTFCKGCLKEWATKQQ----PLECPTCRTQ 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+++P GV L +F VN LLD + ++
Sbjct: 56 VSLPEQGVDGLRTNFYVNNLLDFAAAKK 83
>gi|260782107|ref|XP_002586133.1| hypothetical protein BRAFLDRAFT_248419 [Branchiostoma floridae]
gi|229271225|gb|EEN42144.1| hypothetical protein BRAFLDRAFT_248419 [Branchiostoma floridae]
Length = 607
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL R+ A++ G L CPICR+ +
Sbjct: 8 EITDEFLVCQICLENFK----QPKVLPCLHTFCQPCLERLLAAEP--VGKLDCPICRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P GV L +FLV +L D++ +Q +
Sbjct: 62 PLPENGVQGLKSNFLVGKLHDILQQQSK 89
>gi|260835725|ref|XP_002612858.1| hypothetical protein BRAFLDRAFT_67192 [Branchiostoma floridae]
gi|229298239|gb|EEN68867.1| hypothetical protein BRAFLDRAFT_67192 [Branchiostoma floridae]
Length = 601
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ L CG CL + TPKLLPC HT C CL R R + CP+CR Q IP
Sbjct: 20 DELLACGICLEDFK----TPKLLPCGHTFCQACLERY----VRGASDMACPVCRRQGAIP 71
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRR 112
GV ALP +F V + +L+ QRR
Sbjct: 72 PEGVGALPGNFWVGNVRELLKGQRR 96
>gi|260833106|ref|XP_002611498.1| hypothetical protein BRAFLDRAFT_63867 [Branchiostoma floridae]
gi|229296869|gb|EEN67508.1| hypothetical protein BRAFLDRAFT_63867 [Branchiostoma floridae]
Length = 586
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 12 NSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE 71
N +V+ S E FL C C YD PK+LPC HT C CL + A +
Sbjct: 332 NCHIVQMASGVASQIKEEFLVCQICFEDYD----KPKVLPCQHTFCQKCLKEMLA----K 383
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLM 107
G L CP CR + +P+ GV LP SF VN+L D++
Sbjct: 384 MGKLTCPNCRLECQLPQNGVEGLPTSFFVNKLRDII 419
>gi|260810020|ref|XP_002599802.1| hypothetical protein BRAFLDRAFT_205810 [Branchiostoma floridae]
gi|229285084|gb|EEN55814.1| hypothetical protein BRAFLDRAFT_205810 [Branchiostoma floridae]
Length = 202
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQTRETGTLRCPICREQI 84
E FL C CL YD PK+LPC HT C CL ++ A T G L CP CR+
Sbjct: 9 ITEEFLVCQICLEDYD----RPKILPCLHTFCQGCLEKLPVAKSTDGPGKLSCPTCRQDA 64
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR 109
T+P+ GV AL +FLV +L D+M +
Sbjct: 65 TLPKDGVRALKDNFLVTKLSDVMKQ 89
>gi|260809861|ref|XP_002599723.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
gi|229285004|gb|EEN55735.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
Length = 681
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF++ FLTC C+ + P++LPC HT C CL Q L CP CR Q
Sbjct: 9 DDFDDQFLTCPVCMPHF----RDPRILPCLHTFCKGCLEEWVTKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+++P GV L +F VN LLD + ++
Sbjct: 61 VSLPDQGVDGLKTNFYVNNLLDFAAAKK 88
>gi|260824641|ref|XP_002607276.1| hypothetical protein BRAFLDRAFT_88224 [Branchiostoma floridae]
gi|229292622|gb|EEN63286.1| hypothetical protein BRAFLDRAFT_88224 [Branchiostoma floridae]
Length = 1035
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ A T+ G L CP CR+
Sbjct: 380 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLA--TKPVGKLSCPTCRQ 433
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQ 110
+ +P GV L +FLV +L D++ +Q
Sbjct: 434 DVPLPENGVQGLKSNFLVGKLHDILRQQ 461
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ A T G L CP CR+
Sbjct: 6 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLA--TEPVGKLSCPTCRQ 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKK 127
+ +P GV L +FLV +L D+M +Q PK S S+ ++
Sbjct: 60 DVPLPENGVQGLKSNFLVCKLHDIMRQQ-----PKVSGKTSESQR 99
>gi|431898214|gb|ELK06909.1| Tripartite motif-containing protein 56 [Pteropus alecto]
Length = 763
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGGHLRCPECREN 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|156402800|ref|XP_001639778.1| predicted protein [Nematostella vectensis]
gi|156226908|gb|EDO47715.1| predicted protein [Nematostella vectensis]
Length = 750
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S+ + +E L C CL Y TPK+LPC HT C HCL + S + CP
Sbjct: 3 SVEVDKLSEHLLKCPICLETY----RTPKVLPCLHTFCQHCLKGMIQSGE---NIIVCPT 55
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMS 108
CR ++ +P+ GV+AL +F +N +LD +S
Sbjct: 56 CRCEVCVPKEGVSALSTNFFINNMLDFLS 84
>gi|321471266|gb|EFX82239.1| hypothetical protein DAPPUDRAFT_302643 [Daphnia pulex]
Length = 561
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F+TCG C C YD + PK L CSHTVCL CL I R+ T+ CP CR+ T
Sbjct: 8 EDFVTCGVCFCEYDDADKKPKFLQCSHTVCLSCLKGI-----RDGDTITCPFCRD--TFV 60
Query: 88 RGGVAALP 95
+ GV +LP
Sbjct: 61 KFGVESLP 68
>gi|390365340|ref|XP_796849.3| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 753
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 8 TLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS 67
T+++ S +V+ + ++ FL CG CL Y PK+LPC HT C +CL S
Sbjct: 23 TMASQSPVVKQI-------DKQFLVCGICLDRY----KVPKVLPCLHTFCQNCLENYVPS 71
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR 109
E+ TL CP+CR+Q +P GVA L +F + L++++ R
Sbjct: 72 ---ESLTLTCPLCRQQSIVPERGVAGLQSNFFITNLMEVLER 110
>gi|260824639|ref|XP_002607275.1| hypothetical protein BRAFLDRAFT_88223 [Branchiostoma floridae]
gi|229292621|gb|EEN63285.1| hypothetical protein BRAFLDRAFT_88223 [Branchiostoma floridae]
Length = 661
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 8 EITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLA--TEPVGKLSCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+P GV L +FLV +L D++ +Q PK S +S+
Sbjct: 62 PLPENGVQGLKSNFLVGKLHDILRQQ-----PKGSKESSE 96
>gi|395526430|ref|XP_003765366.1| PREDICTED: tripartite motif-containing protein 3 [Sarcophilus
harrisii]
Length = 744
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL +Q+ TL CP+CR+ +
Sbjct: 16 DKQFLVCSICLDRY----HCPKVLPCLHTFCERCLQSYIPAQSL---TLSCPVCRQTSIL 68
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F ++ L+++M R
Sbjct: 69 PEQGVSALQNNFFISNLIEVMQR 91
>gi|126330157|ref|XP_001363305.1| PREDICTED: tripartite motif-containing protein 3 [Monodelphis
domestica]
Length = 744
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL +Q+ TL CP+CR+ +
Sbjct: 16 DKQFLVCSICLDRY----HCPKVLPCLHTFCERCLQSYIPAQSL---TLSCPVCRQTSIL 68
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F ++ L+++M R
Sbjct: 69 PEQGVSALQNNFFISNLIEVMQR 91
>gi|345801259|ref|XP_003434792.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Canis lupus
familiaris]
Length = 771
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----EGGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260792734|ref|XP_002591369.1| hypothetical protein BRAFLDRAFT_227369 [Branchiostoma floridae]
gi|229276574|gb|EEN47380.1| hypothetical protein BRAFLDRAFT_227369 [Branchiostoma floridae]
Length = 698
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP C Q+
Sbjct: 10 DFDEQFLTCSVCMLHF----RDPRVLPCLHTFCRECLQEWATKQP----PLECPTCLTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN LLD + ++
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKK 88
>gi|260815213|ref|XP_002602368.1| hypothetical protein BRAFLDRAFT_135712 [Branchiostoma floridae]
gi|229287677|gb|EEN58380.1| hypothetical protein BRAFLDRAFT_135712 [Branchiostoma floridae]
Length = 645
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D ++ FL C CL G PK+LPC HT C CL RI + R +L CPICR+++
Sbjct: 2 DIHDEFLVCKVCL----GEFQQPKMLPCLHTFCQACLERIL--EQRPALSLSCPICRQRV 55
Query: 85 TIPRGGVAALPPSFLVNQLLDLM 107
+P+ GV L +F+V +L DL+
Sbjct: 56 PLPQNGVQGLKNNFVVVKLRDLV 78
>gi|260833090|ref|XP_002611490.1| hypothetical protein BRAFLDRAFT_63875 [Branchiostoma floridae]
gi|229296861|gb|EEN67500.1| hypothetical protein BRAFLDRAFT_63875 [Branchiostoma floridae]
Length = 899
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E FL C C Y PK+LPC HT C CL ++ A + G L CP CR + +P
Sbjct: 11 EEFLVCQICFEDY----REPKVLPCQHTFCKECLEKMVA----KMGKLTCPNCRRECPLP 62
Query: 88 RGGVAALPPSFLVNQLLDLM 107
+ GV P SF VN+L D++
Sbjct: 63 QNGVGGFPTSFFVNKLRDIV 82
>gi|260832804|ref|XP_002611347.1| hypothetical protein BRAFLDRAFT_210810 [Branchiostoma floridae]
gi|229296718|gb|EEN67357.1| hypothetical protein BRAFLDRAFT_210810 [Branchiostoma floridae]
Length = 88
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCL----EDLKQPKMLPCLHTFCQSCLEKLLA--TEPVGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+PR GV L +FLV +L D++ +Q
Sbjct: 62 PLPRNGVQGLKSNFLVGKLRDILQQQ 87
>gi|260815444|ref|XP_002602483.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
gi|229287793|gb|EEN58495.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
Length = 730
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR +
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTHV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN LLD + ++
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKK 88
>gi|260824629|ref|XP_002607270.1| hypothetical protein BRAFLDRAFT_88218 [Branchiostoma floridae]
gi|229292616|gb|EEN63280.1| hypothetical protein BRAFLDRAFT_88218 [Branchiostoma floridae]
Length = 660
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ T G L CP CR+
Sbjct: 6 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLV--TEPVGKLSCPTCRQ 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKK 127
+ +P+ GV L +FLV +L D+M +Q PK S S+ ++
Sbjct: 60 DVPLPQNGVQGLKSNFLVCKLHDIMRQQ-----PKVSGKTSESQR 99
>gi|417404323|gb|JAA48921.1| Putative e3 ubiquitin-protein ligase trim56 [Desmodus rotundus]
Length = 745
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHLRCPECREN 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260822751|ref|XP_002606765.1| hypothetical protein BRAFLDRAFT_82407 [Branchiostoma floridae]
gi|229292109|gb|EEN62775.1| hypothetical protein BRAFLDRAFT_82407 [Branchiostoma floridae]
Length = 692
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L CG CL + TPKLLPC HT C CL A + CP CR +I +P
Sbjct: 14 EDLLLCGICLDDFK----TPKLLPCGHTFCEKCLENFA----KRGRAFCCPNCRRKIDLP 65
Query: 88 RGGVAALPPSFLVNQLLDLM-------SRQRRHIIPKCSTHNSQ 124
GG+ ALP +F + + DL+ R+R KC H +
Sbjct: 66 HGGIRALPGNFWIGGMRDLLMATKKDDDRRRGGFHEKCLLHKEE 109
>gi|260824627|ref|XP_002607269.1| hypothetical protein BRAFLDRAFT_88217 [Branchiostoma floridae]
gi|229292615|gb|EEN63279.1| hypothetical protein BRAFLDRAFT_88217 [Branchiostoma floridae]
Length = 661
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ ASQ L CP CR+
Sbjct: 6 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQSCLERLLASQ--RVVQLSCPTCRQ 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQ 110
+ +P GV L +FLV +L D++ +Q
Sbjct: 60 DVPLPENGVQGLKSNFLVGKLHDILRQQ 87
>gi|260823250|ref|XP_002604096.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
gi|229289421|gb|EEN60107.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
Length = 711
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A GT +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLCNLAG----RGGTFQCPNCRQQVRLPFQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQIKKL 128
VA LP + + + + +Q +H+ +CS H S+ KL
Sbjct: 68 VAGLPDHLMAANMCEKLQKQEKHLEETREQPQSGNRCSFHPSEEVKL 114
>gi|405975694|gb|EKC40243.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 497
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRE--------- 71
F E FL C C YD E PK LPC+HT CL CL ++ S+TR
Sbjct: 23 FEEQFLRCHICNEKYDQTERHPKSLPCNHTFCLPCLKQVFDHNQQNSRTRRQITWFDDSY 82
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
G L+CP CR +I + R + +LP V Q++D +S+ C H +Q
Sbjct: 83 EGVLKCPECRVEIFLRRAEIESLPSDHRVIQMMDFLSQVSAKSQNVCGKHENQ 135
>gi|390362202|ref|XP_003730096.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Strongylocentrotus purpuratus]
gi|390362204|ref|XP_003730097.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 748
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+ ED + FL C C+ PK+L C HT C+ CL A + L CP+C
Sbjct: 6 VRAEDIDREFLQCPLCIDRL----QKPKVLSCQHTFCVGCLELWVAKNNDQ---LSCPVC 58
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
R + +P+ GV +LP +F VN ++D + R+R+ + H +
Sbjct: 59 RNEYELPQAGVHSLPDNFFVNSIIDFIGRKRQASATALTCHGCE 102
>gi|301791351|ref|XP_002930649.1| PREDICTED: tripartite motif-containing protein 56-like [Ailuropoda
melanoleuca]
gi|281349522|gb|EFB25106.1| hypothetical protein PANDA_021148 [Ailuropoda melanoleuca]
Length = 777
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260809851|ref|XP_002599718.1| hypothetical protein BRAFLDRAFT_249762 [Branchiostoma floridae]
gi|229284999|gb|EEN55730.1| hypothetical protein BRAFLDRAFT_249762 [Branchiostoma floridae]
Length = 275
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF++ FLTC C+ + P++LPC HT C CL Q L CP CR Q
Sbjct: 9 DDFDDQFLTCPVCVLHF----RDPRILPCLHTFCKGCLEEWVTKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+++P GV L +F VN LLD + ++
Sbjct: 61 VSLPDQGVDGLRANFYVNNLLDFAAAKK 88
>gi|293341115|ref|XP_001076813.2| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like [Rattus
norvegicus]
gi|149062960|gb|EDM13283.1| rCG21693, isoform CRA_a [Rattus norvegicus]
gi|149062961|gb|EDM13284.1| rCG21693, isoform CRA_a [Rattus norvegicus]
Length = 734
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 17/103 (16%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
M+S +S+ TL+E +S FL C CL HTPK LPC HT C CL+++
Sbjct: 1 MTSKVSS-PTLLEALS-------SDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQL 48
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLM 107
G +RCP CRE + +P GVAA +F VN LLDL+
Sbjct: 49 DIG-----GQVRCPECRETVPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|260835848|ref|XP_002612919.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
gi|229298301|gb|EEN68928.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
Length = 604
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N + E L+CG CL + P++LPC HT C +C+S+I+A + RCP CR
Sbjct: 5 NLQKIREELLSCGVCLETFT----EPRVLPCQHTFCQNCISKISADKR----IFRCPTCR 56
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMS--------RQRRHIIPKCSTHNSQIKKL 128
EQ+ +P+ GV +F + + + ++ KC TH ++++
Sbjct: 57 EQVILPKDGVEGFKKNFEIASFCEKLVVVKKPPPIAEKPRAFDKCGTHKKEVRRF 111
>gi|260785262|ref|XP_002587681.1| hypothetical protein BRAFLDRAFT_92727 [Branchiostoma floridae]
gi|229272832|gb|EEN43692.1| hypothetical protein BRAFLDRAFT_92727 [Branchiostoma floridae]
Length = 445
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E F E L+C CL ++D PK+LPC HT C CL AA + G +CP CR +
Sbjct: 11 EQFKED-LSCSICLDLFD----RPKVLPCQHTFCHDCLIDHAARR----GIFKCPNCRLR 61
Query: 84 ITIPRGGVAALPPSFLVNQLLD 105
+ +PR GVA LP ++LV L +
Sbjct: 62 VQLPRNGVAGLPDNYLVTSLCE 83
>gi|260826081|ref|XP_002607994.1| hypothetical protein BRAFLDRAFT_213589 [Branchiostoma floridae]
gi|229293344|gb|EEN64004.1| hypothetical protein BRAFLDRAFT_213589 [Branchiostoma floridae]
Length = 745
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQSCLEKLLA--TEPVGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLM 107
+P+ GV L +FLV +L D++
Sbjct: 62 PLPQNGVQGLKSNFLVGKLRDIL 84
>gi|260826067|ref|XP_002607987.1| hypothetical protein BRAFLDRAFT_145376 [Branchiostoma floridae]
gi|229293337|gb|EEN63997.1| hypothetical protein BRAFLDRAFT_145376 [Branchiostoma floridae]
Length = 734
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+L C HT C CL ++ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDFK----QPKVLQCLHTFCQSCLEKLLA--TEPVGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKLR 129
+P GV L +FLV +L D++ +Q PK T + + LR
Sbjct: 62 PLPENGVQGLKSNFLVGKLRDILQQQ-----PKGETSEVREEGLR 101
>gi|260795081|ref|XP_002592535.1| hypothetical protein BRAFLDRAFT_69052 [Branchiostoma floridae]
gi|229277755|gb|EEN48546.1| hypothetical protein BRAFLDRAFT_69052 [Branchiostoma floridae]
Length = 279
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET--GTLRCPICREQ 83
++ + C C Y+ PK+LPC HT C+ CL+R+ AS+T ++ G L CP+CRE+
Sbjct: 32 ISDEMIVCNICFETYN----RPKVLPCLHTFCMDCLARLTASKTAKSPKGKLTCPMCREE 87
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+P+ GV L +F V+ L ++ +R
Sbjct: 88 TPLPKNGVKGLRDNFFVSNLCQILHAER 115
>gi|56749780|sp|Q80VI1.1|TRI56_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM56; AltName:
Full=Tripartite motif-containing protein 56
gi|28278996|gb|AAH45615.1| Trim56 protein [Mus musculus]
gi|148687336|gb|EDL19283.1| tripartite motif-containing 56, isoform CRA_a [Mus musculus]
gi|148687337|gb|EDL19284.1| tripartite motif-containing 56, isoform CRA_a [Mus musculus]
Length = 734
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++ G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLDIG-----GQVRCPECREI 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPAEGVAAFKTNFFVNGLLDLV 86
>gi|41235779|ref|NP_958761.1| E3 ubiquitin-protein ligase TRIM56 [Mus musculus]
gi|26332124|dbj|BAC29792.1| unnamed protein product [Mus musculus]
Length = 734
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++ G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLDIG-----GQVRCPECREI 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPAEGVAAFKTNFFVNGLLDLV 86
>gi|260820806|ref|XP_002605725.1| hypothetical protein BRAFLDRAFT_77992 [Branchiostoma floridae]
gi|229291060|gb|EEN61735.1| hypothetical protein BRAFLDRAFT_77992 [Branchiostoma floridae]
Length = 636
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL ++ A++ G L CP CR+ +
Sbjct: 9 EITDEFLVCQVCLEDFK----QPKMLPCLHTFCQLCLEKLLAAEL--DGKLACPTCRQDV 62
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P+ GV L +FLV +L D++ +Q +
Sbjct: 63 ALPQNGVQGLKSNFLVGKLHDILQQQAK 90
>gi|432889748|ref|XP_004075342.1| PREDICTED: tripartite motif-containing protein 3-like [Oryzias
latipes]
Length = 751
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 21 DKQFLVCSICLDRY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSIL 73
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GVAAL +F + L++++ R P+CS
Sbjct: 74 PEKGVAALQNNFFITNLMEVLQRD-----PECS 101
>gi|260823296|ref|XP_002604119.1| hypothetical protein BRAFLDRAFT_71593 [Branchiostoma floridae]
gi|229289444|gb|EEN60130.1| hypothetical protein BRAFLDRAFT_71593 [Branchiostoma floridae]
Length = 591
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A G +CPICR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDLAG----RGGAFQCPICRQQVRLPSRG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQIKKL 128
V LP + + + + + +Q H+ +CS H S+ KL
Sbjct: 68 VTGLPDNLMAANMCEKLQKQENHLEETREQPQSGNRCSFHTSEEVKL 114
>gi|260814093|ref|XP_002601750.1| hypothetical protein BRAFLDRAFT_76030 [Branchiostoma floridae]
gi|229287052|gb|EEN57762.1| hypothetical protein BRAFLDRAFT_76030 [Branchiostoma floridae]
Length = 669
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE FL C C +D PK+LPC HT C CL ++ A+Q L CP CR+++
Sbjct: 8 EINEEFLVCQICYNDFD----RPKILPCLHTFCQPCLEKLFAAQADRN--LSCPTCRQEL 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P GV L +FLV++L D++++ R
Sbjct: 62 YLPPHGVQGLKDNFLVSKLRDVVTKPGR 89
>gi|348525352|ref|XP_003450186.1| PREDICTED: tripartite motif-containing protein 3-like [Oreochromis
niloticus]
Length = 747
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 17 DKQFLVCSICLDHY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GVAAL +F + L++++ R P+CS
Sbjct: 70 PEKGVAALQNNFFITNLMEVLQRD-----PECS 97
>gi|296473018|tpg|DAA15133.1| TPA: tripartite motif protein 2-like [Bos taurus]
gi|440908417|gb|ELR58431.1| Tripartite motif-containing protein 56 [Bos grunniens mutus]
Length = 755
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|410910292|ref|XP_003968624.1| PREDICTED: tripartite motif-containing protein 3-like [Takifugu
rubripes]
Length = 747
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 17 DKQFLVCSICLDHY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GVAAL +F + L++++ R P+CS
Sbjct: 70 PEKGVAALQNNFFITNLMEVLQRD-----PECS 97
>gi|322967632|sp|E1BD59.1|TRI56_BOVIN RecName: Full=E3 ubiquitin-protein ligase TRIM56; AltName:
Full=Tripartite motif-containing protein 56
Length = 732
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|330864765|ref|NP_001193503.1| E3 ubiquitin-protein ligase TRIM56 [Bos taurus]
Length = 755
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|291413198|ref|XP_002722861.1| PREDICTED: tripartite motif-containing 56 isoform 1 [Oryctolagus
cuniculus]
Length = 758
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|405965350|gb|EKC30731.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 482
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E E L C C+ Y P++LPC HTVCL+CL + RCP CR
Sbjct: 46 ERLRERILQCPICIDEY----KDPRILPCHHTVCLNCLLDYVRHSSSSGRLFRCPQCRSD 101
Query: 84 ITIPRGGVAALPPSFLVNQLLD 105
I +PRGGV PP+F VN + D
Sbjct: 102 ICVPRGGVKDFPPNFYVNCIQD 123
>gi|47227859|emb|CAG09022.1| unnamed protein product [Tetraodon nigroviridis]
Length = 767
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 17 DKQFLVCSICLDHY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GVAAL +F + L++++ R P+CS
Sbjct: 70 PEKGVAALQNNFFITNLMEVLQRD-----PECS 97
>gi|291413200|ref|XP_002722862.1| PREDICTED: tripartite motif-containing 56 isoform 2 [Oryctolagus
cuniculus]
Length = 730
Score = 68.2 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260826073|ref|XP_002607990.1| hypothetical protein BRAFLDRAFT_213655 [Branchiostoma floridae]
gi|229293340|gb|EEN64000.1| hypothetical protein BRAFLDRAFT_213655 [Branchiostoma floridae]
Length = 91
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 11 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLEKLLA--TEPVGKLDCPTCRQDV 64
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+P GV L +FLV +L D++ +Q
Sbjct: 65 PLPENGVQGLKSNFLVGKLRDILQQQ 90
>gi|390334568|ref|XP_003723958.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 398
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 14 TLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG 73
T+ ET + +D E FLTC CL + PK+LPC H C CL + S+++E G
Sbjct: 2 TMAETAASLAKDLREEFLTCSLCLTCF----SRPKMLPCQHVFCTRCLHKWYESKSKENG 57
Query: 74 ----TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
T+ CP+CR T+P G+ P S + L++ +
Sbjct: 58 AQAKTVTCPMCRVSQTVPASGILGFPDSHAMTSLMNFLD 96
>gi|340383445|ref|XP_003390228.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 351
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E LTC CL EH PK+LPC H+ C HCL ++ + T + CP CR I
Sbjct: 14 EEQLTCLICL------EHFTNPKILPCHHSFCEHCLEGLSRVKKNGTYYISCPTCRRSIE 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P+GG A P +F +N L +L S+ +
Sbjct: 68 LPKGGAGAFPVAFTLNNLKELYSQMKE 94
>gi|260834257|ref|XP_002612128.1| hypothetical protein BRAFLDRAFT_96076 [Branchiostoma floridae]
gi|229297501|gb|EEN68137.1| hypothetical protein BRAFLDRAFT_96076 [Branchiostoma floridae]
Length = 354
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF + FLTC C+ Y P++LPC HT CL A Q L CP CR Q+
Sbjct: 10 DFGDQFLTCSVCMLRY----RDPRVLPCFHTFYKECLKLWATQQQ----PLECPACRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN+LLD + ++
Sbjct: 62 SLPDQGVDGLRTNFYVNKLLDFAAVKK 88
>gi|260824834|ref|XP_002607372.1| hypothetical protein BRAFLDRAFT_69778 [Branchiostoma floridae]
gi|229292719|gb|EEN63382.1| hypothetical protein BRAFLDRAFT_69778 [Branchiostoma floridae]
Length = 1473
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC +T C CL T GT +CPICR+Q+ +P G
Sbjct: 1154 LTCSICLELFT----RPKMLPCQYTFCQDCLQ----DHTGRGGTFQCPICRQQVRLPPKG 1205
Query: 91 VAALPPSFLVNQLLDLMSRQRR---------HIIPKCSTHNSQIKKL 128
VA LP + + + + + Q + +CS H S+ KL
Sbjct: 1206 VAGLPDNLMAASMCERLQNQAKLSGEANEQPQPGSRCSFHPSEEVKL 1252
>gi|292621594|ref|XP_686295.3| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Danio
rerio]
Length = 754
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 21 DKQFLVCSICLEHY----HNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSIL 73
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQR 111
P GVAAL +F + L++++ R++
Sbjct: 74 PEKGVAALQNNFFITNLMEVLQREQ 98
>gi|260787425|ref|XP_002588753.1| hypothetical protein BRAFLDRAFT_89820 [Branchiostoma floridae]
gi|229273923|gb|EEN44764.1| hypothetical protein BRAFLDRAFT_89820 [Branchiostoma floridae]
Length = 798
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G RCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGAFRCPNCRQQVRLPHQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + LV+ L + +Q
Sbjct: 68 VAGLPDNHLVSSLCATLQKQ 87
>gi|297680082|ref|XP_002817834.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Pongo
abelii]
gi|395738243|ref|XP_003777052.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Pongo
abelii]
Length = 755
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPSEGVAAFKTNFFVNGLLDLV 86
>gi|405958433|gb|EKC24561.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 590
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC-----LSRIAASQTRETGTLRCP 78
++ N+ FLTC CL G +PK L C HT C C ++ + + CP
Sbjct: 61 QEINDEFLTCKICL----EGYKSPKCLDCLHTFCEQCIDNHIMNECTYKKYSDYREFTCP 116
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
+CR++ +P GGV LP +FLV+ L +L+ RQR P C
Sbjct: 117 LCRKRTQLPLGGVKKLPDNFLVSSLSELVQRQRPSKFPFCD 157
>gi|327290338|ref|XP_003229880.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
TRIM56-like [Anolis carolinensis]
Length = 651
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+E FL+C CL + PK+LPC HT C CL + +T LRCP CR
Sbjct: 21 WEALASGFLSCPICLERFS----RPKILPCLHTYCQGCLETLLDGRT-----LRCPECRV 71
Query: 83 QITIPRGGVAALPPSFLVNQLLDL 106
++ +P GGVAAL +F +N LLDL
Sbjct: 72 RVPLPAGGVAALKTNFFINGLLDL 95
>gi|260822980|ref|XP_002603961.1| hypothetical protein BRAFLDRAFT_71751 [Branchiostoma floridae]
gi|229289286|gb|EEN59972.1| hypothetical protein BRAFLDRAFT_71751 [Branchiostoma floridae]
Length = 631
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 18/108 (16%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PK+LPC HT CL CL +A GTL+C +CR+Q+ +P
Sbjct: 37 LSCSICLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGTLKCAVCRQQVRLPPQ 88
Query: 90 GVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
GVA LP + LV L + + +R++ +CS H S++ K+
Sbjct: 89 GVAGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHRSEVLKV 136
>gi|149698139|ref|XP_001501223.1| PREDICTED: tripartite motif-containing protein 2 [Equus caballus]
Length = 744
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|351698768|gb|EHB01687.1| Tripartite motif-containing protein 56 [Heterocephalus glaber]
Length = 739
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++A E + CP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLA-----EGSHVCCPECREA 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|340377925|ref|XP_003387479.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 753
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PK+LPC H+ C HCL + + E CP CR + +P
Sbjct: 14 EERLTCPVCLGHYT----NPKILPCHHSFCQHCLEGLPLDKKSEIYYFFCPTCRRRTKLP 69
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRR 112
GV A P +F +N L ++ S ++
Sbjct: 70 EKGVGAFPVAFHLNDLKEMYSLTKK 94
>gi|332255163|ref|XP_003276702.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Nomascus leucogenys]
Length = 755
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|156402802|ref|XP_001639779.1| predicted protein [Nematostella vectensis]
gi|156226909|gb|EDO47716.1| predicted protein [Nematostella vectensis]
Length = 264
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S+ + +E L C CL Y TPK+LPC HT C HCL + S + CP
Sbjct: 3 SVEVDKLSEHLLKCPICLETY----RTPKVLPCLHTFCQHCLKGMIQSGE---NIIVCPT 55
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMS 108
CR ++ +P+ GV+AL +F +N +LD +S
Sbjct: 56 CRCEVCVPKEGVSALSTNFFINNMLDFLS 84
>gi|381388750|ref|NP_001244243.1| tripartite motif-containing protein 2 [Gallus gallus]
Length = 744
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GV+AL +F + L+D++ R + I + S
Sbjct: 70 PEKGVSALQNNFFITNLMDVLQRTPENSIEESS 102
>gi|291231823|ref|XP_002735871.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 774
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
++ ED +++FL C C+ PK+LPC HT C CL + + G L CP+
Sbjct: 6 TVKTEDLDQNFLQCAFCIERL----RKPKILPCLHTFCEVCLGQWV---RKNVGKLICPV 58
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
CR + +P G+ LP +F +N ++D + ++
Sbjct: 59 CRNEYPLPEKGIMGLPDNFFINNMIDFLEARK 90
>gi|260811644|ref|XP_002600532.1| hypothetical protein BRAFLDRAFT_145043 [Branchiostoma floridae]
gi|229285819|gb|EEN56544.1| hypothetical protein BRAFLDRAFT_145043 [Branchiostoma floridae]
Length = 760
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D +E LTC C+ + P++LPC HT C CL AA Q L CP CR Q+
Sbjct: 8 DLDEQSLTCPLCMLHF----RDPRVLPCLHTFCRECLQEWAAKQQ----PLECPTCRTQV 59
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L + VN LLD + ++
Sbjct: 60 SLPDQGVDGLRANVYVNNLLDFAAVKK 86
>gi|395842830|ref|XP_003794211.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Otolemur garnettii]
Length = 756
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++ E G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QMPKTLPCLHTYCQDCLAQLV-----EGGHVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPTGVAAFKTNFFVNGLLDLV 86
>gi|122114540|ref|NP_001073637.1| tripartite motif-containing 3b [Danio rerio]
gi|120537370|gb|AAI29040.1| Tripartite motif-containing 3b [Danio rerio]
Length = 748
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 17 DKQFLVCSICLDHY----HNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L++++ R
Sbjct: 70 PEKGVAALQNNFFITNLMEVLQR 92
>gi|291240839|ref|XP_002740327.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 650
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ +E LTC CL Y PK+LPC H+ C CL ++ ++ GT++CP CR++
Sbjct: 35 DKIDEDLLTCTVCLERY----KNPKILPCHHSFCEQCLVQLKGTR----GTVKCPNCRQR 86
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH 113
++ + LPPS ++N ++D++ Q RH
Sbjct: 87 HSV--NNIQQLPPSTIINSVIDIIEDQERH 114
>gi|363729521|ref|XP_422922.3| PREDICTED: tripartite motif-containing protein 3 [Gallus gallus]
Length = 743
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 16 DKQFLVCSICLDRY----RNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSIL 68
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L++++ R
Sbjct: 69 PERGVAALQNNFFITNLMEVLQR 91
>gi|73978313|ref|XP_532694.2| PREDICTED: tripartite motif-containing protein 2 [Canis lupus
familiaris]
Length = 684
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 53 DKQFLICSICLERYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 105
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 106 PEKGVAALQNNFFITNLMDVLQR 128
>gi|260806841|ref|XP_002598292.1| hypothetical protein BRAFLDRAFT_69647 [Branchiostoma floridae]
gi|229283564|gb|EEN54304.1| hypothetical protein BRAFLDRAFT_69647 [Branchiostoma floridae]
Length = 728
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL CG CL Y TPK+LPC HT C CL +E+ +L CP+CR+
Sbjct: 9 KQIDKQFLICGICLERYK----TPKVLPCLHTFCECCLQTYIP---QESLSLSCPVCRQT 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P+ GV+AL +F + L++++ R
Sbjct: 62 SILPQKGVSALQNNFFITGLMEVLER 87
>gi|284005036|ref|NP_001164683.1| tripartite motif protein [Saccoglossus kowalevskii]
gi|283464125|gb|ADB22646.1| tripartite motif protein [Saccoglossus kowalevskii]
Length = 483
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
V I+ ++F+E FLTC C Y+ E PK LPC HT C CLS S T CP
Sbjct: 7 VQISKDEFDERFLTCKLCEEPYNDEEKIPKYLPCLHTYCKSCLS----SHIGTTMEFDCP 62
Query: 79 ICREQITIPRGGVAALPPSFLV-NQLLDLMSRQR 111
CR++ P GV +P +F++ NQ +++++
Sbjct: 63 ECRQKTQTPHSGVDGIPNNFIIQNQRQYFVTQEK 96
>gi|340383447|ref|XP_003390229.1| PREDICTED: hypothetical protein LOC100641189, partial [Amphimedon
queenslandica]
Length = 600
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E LTC CL EH PK+LPC H+ C HCL ++ + T + CP CR I
Sbjct: 14 EEQLTCLICL------EHFTNPKILPCHHSFCEHCLEGLSRVKKNGTYYISCPTCRRSIE 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P+GG A P +F +N L + S+ +
Sbjct: 68 LPKGGAGAFPVAFTLNNLKEFYSQMKE 94
>gi|432847405|ref|XP_004066008.1| PREDICTED: tripartite motif-containing protein 2-like [Oryzias
latipes]
Length = 744
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ ++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+
Sbjct: 13 FRQIDKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQ 65
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 66 TSILPEKGVAALQSNFFITNLMDVLQR 92
>gi|296192347|ref|XP_002744018.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Callithrix jacchus]
Length = 755
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|260820393|ref|XP_002605519.1| hypothetical protein BRAFLDRAFT_104084 [Branchiostoma floridae]
gi|229290853|gb|EEN61529.1| hypothetical protein BRAFLDRAFT_104084 [Branchiostoma floridae]
Length = 536
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL ++ +T T +CPICR+Q+ P G
Sbjct: 16 LTCSICLGLFT----RPKVLPCQHTFCQGCLQHLSEGET----TFQCPICRQQVRKPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
V LP + L L + +Q C H S+ KL
Sbjct: 68 VKELPNNLLATSLQTKIQQQATESRDFCFLHQSEEIKL 105
>gi|443700444|gb|ELT99397.1| hypothetical protein CAPTEDRAFT_194410, partial [Capitella teleta]
Length = 294
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ + FL C CL G PK LPC HT C C++ ++ CPICR
Sbjct: 12 QNLRDQFLQCKICL----DGLKVPKTLPCLHTFCADCVAYYIDHNRLDSRKFSCPICRRH 67
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
I IP+ GV P SF V L D++S+
Sbjct: 68 IYIPKNGVEGFPDSFFVETLNDVLSQ 93
>gi|260811694|ref|XP_002600557.1| hypothetical protein BRAFLDRAFT_70065 [Branchiostoma floridae]
gi|229285844|gb|EEN56569.1| hypothetical protein BRAFLDRAFT_70065 [Branchiostoma floridae]
Length = 923
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF++ FLTC C+ + P++LPC HT C CL Q L CP CR Q+
Sbjct: 11 DFDKQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWTTKQQ----PLECPTCRTQV 62
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F VN +LD + ++
Sbjct: 63 SLPDQGVDGLRTNFYVNNMLDFAAVKK 89
>gi|426357307|ref|XP_004045986.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Gorilla
gorilla gorilla]
gi|426357309|ref|XP_004045987.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Gorilla
gorilla gorilla]
Length = 755
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPDGVASFKTNFFVNGLLDLV 86
>gi|260792740|ref|XP_002591372.1| hypothetical protein BRAFLDRAFT_93992 [Branchiostoma floridae]
gi|229276577|gb|EEN47383.1| hypothetical protein BRAFLDRAFT_93992 [Branchiostoma floridae]
Length = 674
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+F+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 NFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRDCLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
++P GV L +F V+ LLD + ++
Sbjct: 62 SLPDQGVDGLRTNFYVSNLLDFAAVKK 88
>gi|224049634|ref|XP_002198438.1| PREDICTED: tripartite motif-containing protein 2 [Taeniopygia
guttata]
Length = 744
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GV+AL +F + L+D++ R + I + S
Sbjct: 70 PEKGVSALQNNFFITNLMDVLQRTPDNSIEESS 102
>gi|54020865|ref|NP_001005680.1| tripartite motif containing 2 [Xenopus (Silurana) tropicalis]
gi|49522062|gb|AAH75100.1| tripartite motif-containing 2 [Xenopus (Silurana) tropicalis]
Length = 760
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F + L+D++ R
Sbjct: 70 PEKGVSALQNNFFITNLMDVLQR 92
>gi|449266608|gb|EMC77650.1| Tripartite motif-containing protein 2, partial [Columba livia]
Length = 755
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 28 DKQFLICSICLDRYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 80
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F + L+D++ R
Sbjct: 81 PEKGVSALQNNFFITNLMDVLQR 103
>gi|297689407|ref|XP_002822134.1| PREDICTED: tripartite motif-containing protein 3 [Pongo abelii]
Length = 773
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 41 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 93
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 94 SILPEQGVSALQNNFFISSLMEAMQQ 119
>gi|148227830|ref|NP_001086096.1| MGC82029 protein [Xenopus laevis]
gi|49257592|gb|AAH74184.1| MGC82029 protein [Xenopus laevis]
Length = 744
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F + L+D++ R
Sbjct: 70 PEKGVSALQNNFFITNLMDVLQR 92
>gi|168013268|ref|XP_001759323.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689636|gb|EDQ76007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 886
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--------AASQTRET----GTLRCPIC 80
C CL +YD GEHTP++L C H+VC C++ + +Q + T G +RCP C
Sbjct: 5 CAVCLQVYDEGEHTPRVLSCGHSVCQSCVAELQLHWGAGSGEAQAQRTQGGGGLVRCPEC 64
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
++ +P GG ALP + + +L+ + R
Sbjct: 65 KQHTKVPLGGRLALPKNIELMRLIQAVPPPR 95
>gi|397471330|ref|XP_003807249.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Pan
paniscus]
gi|397471332|ref|XP_003807250.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Pan
paniscus]
gi|410260318|gb|JAA18125.1| tripartite motif containing 56 [Pan troglodytes]
gi|410339237|gb|JAA38565.1| tripartite motif containing 56 [Pan troglodytes]
Length = 755
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLV 86
>gi|260824808|ref|XP_002607359.1| hypothetical protein BRAFLDRAFT_69765 [Branchiostoma floridae]
gi|229292706|gb|EEN63369.1| hypothetical protein BRAFLDRAFT_69765 [Branchiostoma floridae]
Length = 632
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + L+CP+CR+Q+ +PR G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASRRV----PLQCPVCRQQVRLPRQG 67
Query: 91 VAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
VA LP + LV L L +R++ +CS H S+ KL
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEEVKL 114
>gi|12407375|gb|AAG53476.1|AF220022_1 tripartite motif protein TRIM3 isoform gamma [Homo sapiens]
Length = 665
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|403285819|ref|XP_003934208.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403285821|ref|XP_003934209.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 754
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLANG-----GHVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|119589116|gb|EAW68710.1| tripartite motif-containing 3, isoform CRA_b [Homo sapiens]
Length = 665
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|119589123|gb|EAW68717.1| tripartite motif-containing 3, isoform CRA_g [Homo sapiens]
Length = 668
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|405972293|gb|EKC37069.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 424
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI------------- 64
++ ++ E F E+FL C C +YD H PKLL C H++CL C+ I
Sbjct: 47 SILVDEESFIETFLKCLICRELYDDAIHPPKLLHCHHSLCLQCILLIFQKEAEYRTSLTP 106
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
A S+ T+ CP CR + G+ LP + QL+D +S R+ C H Q
Sbjct: 107 AYSELPTAVTVICPTCRTNFITTQDGIRELPTDHRIIQLIDFVSHTERYTTDFCPLHKFQ 166
>gi|148229109|ref|NP_001085492.1| tripartite motif containing 2 [Xenopus laevis]
gi|49117096|gb|AAH72842.1| MGC80218 protein [Xenopus laevis]
Length = 748
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYK----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F + L+D++ R
Sbjct: 70 PEKGVSALQNNFFITNLMDVLQR 92
>gi|321471260|gb|EFX82233.1| hypothetical protein DAPPUDRAFT_316906 [Daphnia pulex]
Length = 635
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D E F+TCG CLC YD PK LPCSHTVC CL I R T+ CP CR+ I
Sbjct: 75 DVVEDFVTCGVCLCEYDEEIRKPKFLPCSHTVCFLCLQEI-----RRGDTITCPFCRKII 129
Query: 85 T 85
+
Sbjct: 130 S 130
>gi|30794216|ref|NP_112223.1| E3 ubiquitin-protein ligase TRIM56 [Homo sapiens]
gi|56749788|sp|Q9BRZ2.3|TRI56_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM56; AltName:
Full=RING finger protein 109; AltName: Full=Tripartite
motif-containing protein 56
gi|29387126|gb|AAH48194.1| Tripartite motif-containing 56 [Homo sapiens]
gi|112180307|gb|AAH05847.3| Tripartite motif-containing 56 [Homo sapiens]
gi|119570578|gb|EAW50193.1| tripartite motif-containing 56 [Homo sapiens]
gi|167773263|gb|ABZ92066.1| tripartite motif-containing 56 [synthetic construct]
Length = 755
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLV 86
>gi|260792625|ref|XP_002591315.1| hypothetical protein BRAFLDRAFT_76766 [Branchiostoma floridae]
gi|229276519|gb|EEN47326.1| hypothetical protein BRAFLDRAFT_76766 [Branchiostoma floridae]
Length = 669
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E E FL+CG CL Y PK+LPC+HT C CL + T+ CP CR Q
Sbjct: 7 ETILEDFLSCGICLEPYK----KPKILPCAHTFCERCLK----AHTKLKRKFSCPHCRRQ 58
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHI 114
+ +P GV L +F + D++ QR+ +
Sbjct: 59 VILPPEGVKGLGDNFWIGSFRDILEAQRQSL 89
>gi|296217391|ref|XP_002754989.1| PREDICTED: tripartite motif-containing protein 3 isoform 2
[Callithrix jacchus]
gi|296217393|ref|XP_002754990.1| PREDICTED: tripartite motif-containing protein 3 isoform 3
[Callithrix jacchus]
Length = 744
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|12407373|gb|AAG53475.1|AF220021_1 tripartite motif protein TRIM3 isoform beta [Homo sapiens]
Length = 733
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|32454737|ref|NP_150594.2| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|32454739|ref|NP_006449.2| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|351721563|ref|NP_001234935.1| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|332835738|ref|XP_001164502.2| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Pan
troglodytes]
gi|397496607|ref|XP_003819123.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Pan
paniscus]
gi|397496609|ref|XP_003819124.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Pan
paniscus]
gi|397496611|ref|XP_003819125.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Pan
paniscus]
gi|397496613|ref|XP_003819126.1| PREDICTED: tripartite motif-containing protein 3 isoform 4 [Pan
paniscus]
gi|215273906|sp|O75382.2|TRIM3_HUMAN RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=Brain-expressed RING finger protein; AltName:
Full=RING finger protein 22; AltName: Full=RING finger
protein 97
gi|66911192|gb|AAH96827.1| Tripartite motif-containing 3 [Homo sapiens]
gi|119589115|gb|EAW68709.1| tripartite motif-containing 3, isoform CRA_a [Homo sapiens]
gi|158256228|dbj|BAF84085.1| unnamed protein product [Homo sapiens]
gi|168278076|dbj|BAG11016.1| tripartite motif-containing protein 3 [synthetic construct]
gi|410212246|gb|JAA03342.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410212248|gb|JAA03343.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410251376|gb|JAA13655.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410296534|gb|JAA26867.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410339445|gb|JAA38669.1| tripartite motif-containing 3 [Pan troglodytes]
Length = 744
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|12407371|gb|AAG53474.1|AF220020_1 tripartite motif protein TRIM3 isoform alpha [Homo sapiens]
gi|3273699|gb|AAC24809.1| brain expressed ring finger protein [Homo sapiens]
Length = 744
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|344245767|gb|EGW01871.1| Tripartite motif-containing protein 56 [Cricetulus griseus]
Length = 1274
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL TPK LPC HT C CL+ Q G RCP CRE
Sbjct: 270 EALSSDFLACKICLEQL----RTPKTLPCLHTYCQDCLA-----QLDNGGQARCPECRET 320
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 321 VPVPPEGVAAFKTNFFVNGLLDLV 344
>gi|119589120|gb|EAW68714.1| tripartite motif-containing 3, isoform CRA_e [Homo sapiens]
Length = 760
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|388454687|ref|NP_001253130.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|402894369|ref|XP_003910335.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Papio
anubis]
gi|402894371|ref|XP_003910336.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Papio
anubis]
gi|402894373|ref|XP_003910337.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Papio
anubis]
gi|355566763|gb|EHH23142.1| RING finger protein 22 [Macaca mulatta]
gi|355752378|gb|EHH56498.1| RING finger protein 22 [Macaca fascicularis]
gi|380808868|gb|AFE76309.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|383415231|gb|AFH30829.1| tripartite motif-containing protein 3 [Macaca mulatta]
Length = 744
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|403254097|ref|XP_003919815.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403254099|ref|XP_003919816.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403254101|ref|XP_003919817.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Saimiri
boliviensis boliviensis]
gi|403254103|ref|XP_003919818.1| PREDICTED: tripartite motif-containing protein 3 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 744
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|395815117|ref|XP_003781082.1| PREDICTED: tripartite motif-containing protein 3 isoform 1
[Otolemur garnettii]
gi|395815119|ref|XP_003781083.1| PREDICTED: tripartite motif-containing protein 3 isoform 2
[Otolemur garnettii]
Length = 744
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|148229453|ref|NP_001088374.1| tripartite motif containing 3 [Xenopus laevis]
gi|54038768|gb|AAH84635.1| LOC495223 protein [Xenopus laevis]
Length = 740
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ ++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 8 EIDKQFLVCSICLERY----HVPKVLPCLHTFCERCLQSYIPPQSL---TLSCPVCRQTS 60
Query: 85 TIPRGGVAALPPSFLVNQLLDLM------SRQRRHIIP 116
+P GV+AL +F + L++++ RQ + ++P
Sbjct: 61 ILPEKGVSALQNNFFITNLMEVLQRSPESGRQEQSVLP 98
>gi|410917736|ref|XP_003972342.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Takifugu rubripes]
Length = 760
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|350588131|ref|XP_003482568.1| PREDICTED: tripartite motif-containing protein 3 [Sus scrofa]
Length = 733
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+ +
Sbjct: 16 DKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSIL 68
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F ++ L++ M +
Sbjct: 69 PEQGVSALQNNFFISSLMEAMQQ 91
>gi|119589117|gb|EAW68711.1| tripartite motif-containing 3, isoform CRA_c [Homo sapiens]
Length = 733
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|344280668|ref|XP_003412104.1| PREDICTED: tripartite motif-containing protein 3 [Loxodonta
africana]
Length = 744
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|73988285|ref|XP_534038.2| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Canis
lupus familiaris]
Length = 744
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|410917734|ref|XP_003972341.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Takifugu rubripes]
Length = 743
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|345788474|ref|XP_003433077.1| PREDICTED: tripartite motif-containing protein 3 [Canis lupus
familiaris]
Length = 745
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 14 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 66
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 67 SILPEQGVSALQNNFFISSLMEAMQQ 92
>gi|354477614|ref|XP_003501014.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Cricetulus griseus]
Length = 716
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL TPK LPC HT C CL+ Q G RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RTPKTLPCLHTYCQDCLA-----QLDNGGQARCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|410059473|ref|XP_527840.4| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Pan troglodytes]
Length = 627
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLV 86
>gi|444524489|gb|ELV13855.1| Tripartite motif-containing protein 3 [Tupaia chinensis]
Length = 744
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|348558986|ref|XP_003465297.1| PREDICTED: tripartite motif-containing protein 3-like [Cavia
porcellus]
Length = 744
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|431903399|gb|ELK09351.1| Tripartite motif-containing protein 3 [Pteropus alecto]
Length = 768
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|410973073|ref|XP_003992980.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Felis
catus]
Length = 745
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 14 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 66
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 67 SILPEQGVSALQNNFFISSLMEAMQQ 92
>gi|410973071|ref|XP_003992979.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Felis
catus]
Length = 744
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|149719405|ref|XP_001504641.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Equus
caballus]
Length = 744
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|291384493|ref|XP_002708807.1| PREDICTED: tripartite motif-containing 3 [Oryctolagus cuniculus]
Length = 743
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|155372039|ref|NP_001094627.1| tripartite motif-containing protein 3 [Bos taurus]
gi|154425886|gb|AAI51316.1| TRIM3 protein [Bos taurus]
gi|296480026|tpg|DAA22141.1| TPA: tripartite motif-containing 3 [Bos taurus]
Length = 744
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|348524478|ref|XP_003449750.1| PREDICTED: tripartite motif-containing protein 2-like [Oreochromis
niloticus]
Length = 744
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|440896010|gb|ELR48052.1| Tripartite motif-containing protein 3, partial [Bos grunniens
mutus]
Length = 745
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 14 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 66
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 67 SILPEQGVSALQNNFFISSLMEAMQQ 92
>gi|417412644|gb|JAA52699.1| Putative e3 ubiquitin ligase, partial [Desmodus rotundus]
Length = 772
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 41 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 93
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 94 SILPEQGVSALQNNFFISSLMEAMQQ 119
>gi|351703801|gb|EHB06720.1| Tripartite motif-containing protein 3 [Heterocephalus glaber]
Length = 744
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|354501663|ref|XP_003512909.1| PREDICTED: tripartite motif-containing protein 3 [Cricetulus
griseus]
gi|344257591|gb|EGW13695.1| Tripartite motif-containing protein 3 [Cricetulus griseus]
Length = 744
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|260823248|ref|XP_002604095.1| hypothetical protein BRAFLDRAFT_71616 [Branchiostoma floridae]
gi|260823282|ref|XP_002604112.1| hypothetical protein BRAFLDRAFT_71600 [Branchiostoma floridae]
gi|229289420|gb|EEN60106.1| hypothetical protein BRAFLDRAFT_71616 [Branchiostoma floridae]
gi|229289437|gb|EEN60123.1| hypothetical protein BRAFLDRAFT_71600 [Branchiostoma floridae]
Length = 618
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G +CPICR+Q+ +P
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGAFQCPICRQQVRLPPQR 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
VA LP + LV L + + +R++ +CS H S++ K+
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEVLKV 114
>gi|291232806|ref|XP_002736345.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 607
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ +E LTC CL Y PK+LPC H+ C CL ++ S+ T++CP CR+Q
Sbjct: 9 DKIDEDLLTCAVCLERY----KNPKILPCYHSFCEQCLVKLKGSRD----TIKCPNCRQQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH 113
+ + V+ L PS ++N +D++ Q +H
Sbjct: 61 LYVR--NVSQLQPSMVINSAIDIIEDQTKH 88
>gi|432093140|gb|ELK25398.1| Tripartite motif-containing protein 3 [Myotis davidii]
Length = 772
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|301779217|ref|XP_002925020.1| PREDICTED: tripartite motif-containing protein 3-like [Ailuropoda
melanoleuca]
gi|281338585|gb|EFB14169.1| hypothetical protein PANDA_014455 [Ailuropoda melanoleuca]
Length = 744
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F + L++ M +
Sbjct: 66 SILPEQGVSALQNNFFITSLMEAMQQ 91
>gi|260827663|ref|XP_002608784.1| hypothetical protein BRAFLDRAFT_110072 [Branchiostoma floridae]
gi|229294136|gb|EEN64794.1| hypothetical protein BRAFLDRAFT_110072 [Branchiostoma floridae]
Length = 618
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G L+CP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGALQCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
VA LP + LV L + + +R++ +CS H S+ KL
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGKTREQPQSGNRCSFHPSEKLKL 114
>gi|410984580|ref|XP_003998606.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Felis catus]
Length = 696
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----EGGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVN 101
+ +P GVAA +F VN
Sbjct: 63 VPVPPAGVAAFKTNFFVN 80
>gi|260806462|ref|XP_002598103.1| hypothetical protein BRAFLDRAFT_85679 [Branchiostoma floridae]
gi|229283374|gb|EEN54115.1| hypothetical protein BRAFLDRAFT_85679 [Branchiostoma floridae]
Length = 711
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 22/121 (18%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
++YE E L+C CL Y PK+LPC HT C CL T G +CP C
Sbjct: 6 LSYEALLEE-LSCSICLEPYT----RPKVLPCQHTFCQDCLQEF----TGRGGAFQCPNC 56
Query: 81 REQITIPRGGVAALPPSF----LVNQLLDLMSRQ-------RRHIIP--KCSTHNSQIKK 127
R+Q+T+P GVA LP S ++ + + + +Q R P +CS H S++ K
Sbjct: 57 RQQVTLPSKGVAGLPDSHDHINIIANMFERLQQQTSLSEETREQPQPGNRCSFHPSEVLK 116
Query: 128 L 128
+
Sbjct: 117 V 117
>gi|321471258|gb|EFX82231.1| hypothetical protein DAPPUDRAFT_302639 [Daphnia pulex]
Length = 545
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
Y + ESF+TC CLC +D PK LPC+HT+CL CL I + + CP+CR+
Sbjct: 8 YSEETESFVTCSICLCEFDAETRKPKFLPCAHTLCLKCLKEI-----HKEFVISCPLCRK 62
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSR 109
+ + + V++LP + +L L +
Sbjct: 63 EFSY-QDDVSSLPNNSYALHMLKLSEK 88
>gi|260824866|ref|XP_002607388.1| hypothetical protein BRAFLDRAFT_69798 [Branchiostoma floridae]
gi|229292735|gb|EEN63398.1| hypothetical protein BRAFLDRAFT_69798 [Branchiostoma floridae]
Length = 614
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
++E+ LTC CL ++ PK+LPC HT C CL I + Q L+CPICR
Sbjct: 7 SFEEQIREELTCSICLELFT----RPKVLPCQHTFCQDCLQDIVSRQV----PLQCPICR 58
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
+Q P GV LP + LV L + + +R++ +CS H S+ KL
Sbjct: 59 QQARPPPQGVEGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEKLKL 114
>gi|410956709|ref|XP_003984981.1| PREDICTED: tripartite motif-containing protein 2 [Felis catus]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|403272315|ref|XP_003928016.1| PREDICTED: tripartite motif-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|296195383|ref|XP_002745432.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Callithrix jacchus]
gi|353558885|sp|F7H9X2.1|TRIM2_CALJA RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|353558883|sp|D2GXS7.1|TRIM2_AILME RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
gi|281350965|gb|EFB26549.1| hypothetical protein PANDA_001730 [Ailuropoda melanoleuca]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|332217502|ref|XP_003257899.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Nomascus leucogenys]
gi|402870661|ref|XP_003899325.1| PREDICTED: tripartite motif-containing protein 2 isoform 2 [Papio
anubis]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|395834570|ref|XP_003790272.1| PREDICTED: tripartite motif-containing protein 2 [Otolemur
garnettii]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|139948811|ref|NP_001077204.1| tripartite motif-containing protein 2 [Bos taurus]
gi|353558884|sp|A4IF63.1|TRIM2_BOVIN RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
gi|134025874|gb|AAI34424.1| TRIM2 protein [Bos taurus]
gi|296478797|tpg|DAA20912.1| TPA: tripartite motif-containing 2 [Bos taurus]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|194248081|ref|NP_001123539.1| tripartite motif-containing protein 2 isoform 2 [Homo sapiens]
gi|426345754|ref|XP_004040565.1| PREDICTED: tripartite motif-containing protein 2 [Gorilla gorilla
gorilla]
gi|21363034|sp|Q9C040.1|TRIM2_HUMAN RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2; AltName:
Full=RING finger protein 86
gi|12407367|gb|AAG53472.1|AF220018_1 tripartite motif protein TRIM2 [Homo sapiens]
gi|15029681|gb|AAH11052.1| TRIM2 protein [Homo sapiens]
gi|325464659|gb|ADZ16100.1| tripartite motif-containing 2 [synthetic construct]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|344239884|gb|EGV95987.1| Tripartite motif-containing protein 2 [Cricetulus griseus]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|411147439|ref|NP_001258655.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|411147441|ref|NP_001258656.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|411147445|ref|NP_001258657.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|21363036|sp|Q9ESN6.1|TRIM2_MOUSE RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2; AltName:
Full=Neural activity-related RING finger protein
gi|12407365|gb|AAG53471.1|AF220017_1 tripartite motif protein TRIM2 [Mus musculus]
gi|11094232|dbj|BAB17634.1| neural activity-related ring finger protein [Mus musculus]
gi|26337329|dbj|BAC32350.1| unnamed protein product [Mus musculus]
gi|26347983|dbj|BAC37640.1| unnamed protein product [Mus musculus]
gi|37590666|gb|AAH58961.1| Tripartite motif-containing 2 [Mus musculus]
gi|74181085|dbj|BAE27812.1| unnamed protein product [Mus musculus]
gi|148683463|gb|EDL15410.1| tripartite motif protein 2, isoform CRA_c [Mus musculus]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|355560524|gb|EHH17210.1| hypothetical protein EGK_13552 [Macaca mulatta]
gi|384939930|gb|AFI33570.1| E3 ubiquitin-protein ligase TRIM56 [Macaca mulatta]
Length = 755
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|156370888|ref|XP_001628499.1| predicted protein [Nematostella vectensis]
gi|156215477|gb|EDO36436.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC C ++ P++ PC H+ C CL+ IA S+ + + CP C+ +I P
Sbjct: 11 EELLTCRQCSNVFK----NPRITPCLHSFCAECLNEIARSRPYQ-AYIACPTCKYEIRKP 65
Query: 88 RGGV-AALPPSFLVNQLLDLMSRQRR 112
GG+ LPP+F +N+L D+ +RR
Sbjct: 66 EGGLFNTLPPNFFLNRLHDIYVAKRR 91
>gi|383412319|gb|AFH29373.1| E3 ubiquitin-protein ligase TRIM56 [Macaca mulatta]
Length = 755
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|380791681|gb|AFE67716.1| E3 ubiquitin-protein ligase TRIM56, partial [Macaca mulatta]
Length = 741
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|355747550|gb|EHH52047.1| hypothetical protein EGM_12415 [Macaca fascicularis]
Length = 755
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|321471406|gb|EFX82379.1| hypothetical protein DAPPUDRAFT_316830 [Daphnia pulex]
Length = 195
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC CL YD G PK LPCSHT+CL C + R+ T+ CP CR++ +
Sbjct: 10 EDLVTCNICLYEYDEGIRKPKFLPCSHTICLECFQSV-----RQGNTITCPFCRKRTSKD 64
Query: 88 RGGVAA--LPPSFLVNQLLDL 106
G A LP + V +LL L
Sbjct: 65 NGDEAEWTLPTNQYVLELLKL 85
>gi|109066171|ref|XP_001107405.1| PREDICTED: tripartite motif-containing protein 56-like [Macaca
mulatta]
Length = 755
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|410038825|ref|XP_003950493.1| PREDICTED: tripartite motif-containing protein 2 [Pan troglodytes]
Length = 549
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQR 92
>gi|353558899|sp|D3ZQG6.2|TRIM2_RAT RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|74216647|dbj|BAE37753.1| unnamed protein product [Mus musculus]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|355749623|gb|EHH54022.1| hypothetical protein EGM_14757, partial [Macaca fascicularis]
Length = 477
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQR 92
>gi|260820602|ref|XP_002605623.1| hypothetical protein BRAFLDRAFT_232738 [Branchiostoma floridae]
gi|229290958|gb|EEN61633.1| hypothetical protein BRAFLDRAFT_232738 [Branchiostoma floridae]
Length = 97
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 16 VETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL 75
V+ S D + FL C CL + PK+LPC HT C CL R+ A T G L
Sbjct: 8 VKMASDATSDITDKFLVCQVCLEDF----KQPKMLPCLHTFCQPCLERLLA--TEPVGKL 61
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
CP C++ + +P+ GV L + LV +L +++ +Q
Sbjct: 62 DCPTCQQDVPLPKNGVRVLKSNLLVGKLCEILQQQ 96
>gi|426246927|ref|XP_004017238.1| PREDICTED: tripartite motif-containing protein 2 [Ovis aries]
Length = 739
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|351707591|gb|EHB10510.1| Tripartite motif-containing protein 2 [Heterocephalus glaber]
Length = 797
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|149068478|gb|EDM18030.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068479|gb|EDM18031.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068480|gb|EDM18032.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068481|gb|EDM18033.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 744
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|417412608|gb|JAA52682.1| Putative e3 ubiquitin ligase, partial [Desmodus rotundus]
Length = 761
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 34 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 86
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 87 PEKGVAALQNNFFITNLMDVLQR 109
>gi|321471263|gb|EFX82236.1| hypothetical protein DAPPUDRAFT_302641 [Daphnia pulex]
Length = 511
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F TCG CL YD PK LPC HTVCL C+ ++ SQ++ ++ CP CR T P
Sbjct: 8 EDFATCGVCLYEYDEEIRKPKFLPCFHTVCLECIRKL-LSQSQGKKSITCPFCRNISTDP 66
Query: 88 RGGVAA---LPPSFLVNQLLDLMSRQRRHI 114
R + LP + N L ++ +Q+R I
Sbjct: 67 RKDIKEKWILPNN---NHALHII-KQKRQI 92
>gi|301756096|ref|XP_002913903.1| PREDICTED: tripartite motif-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 816
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 89 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 141
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 142 PEKGVAALQNNFFITNLMDVLQR 164
>gi|355687663|gb|EHH26247.1| hypothetical protein EGK_16166 [Macaca mulatta]
Length = 771
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 44 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 96
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 97 PEKGVAALQNNFFITNLMDVLQR 119
>gi|194248079|ref|NP_056086.2| tripartite motif-containing protein 2 isoform 1 [Homo sapiens]
gi|119625365|gb|EAX04960.1| tripartite motif-containing 2, isoform CRA_a [Homo sapiens]
gi|119625367|gb|EAX04962.1| tripartite motif-containing 2, isoform CRA_a [Homo sapiens]
gi|168267392|dbj|BAG09752.1| tripartite motif-containing protein 2 [synthetic construct]
Length = 771
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 44 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 96
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 97 PEKGVAALQNNFFITNLMDVLQR 119
>gi|13929112|ref|NP_113974.1| tripartite motif-containing protein 3 [Rattus norvegicus]
gi|21362968|sp|O70277.1|TRIM3_RAT RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=Brain-expressed RING finger protein; AltName:
Full=RING finger protein 22
gi|3170009|gb|AAC17997.1| RING finger protein [Rattus norvegicus]
Length = 744
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|33468961|ref|NP_061368.1| tripartite motif-containing protein 3 [Mus musculus]
gi|21363044|sp|Q9R1R2.1|TRIM3_MOUSE RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=RING finger protein 22; AltName: Full=RING finger
protein HAC1
gi|12407369|gb|AAG53473.1|AF220019_1 tripartite motif protein TRIM3 [Mus musculus]
gi|5732193|dbj|BAA83343.1| RING finger protein HAC1 [Mus musculus]
gi|12859230|dbj|BAB31580.1| unnamed protein product [Mus musculus]
gi|21706538|gb|AAH34263.1| Trim3 protein [Mus musculus]
gi|74194823|dbj|BAE26003.1| unnamed protein product [Mus musculus]
gi|148684839|gb|EDL16786.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
gi|148684840|gb|EDL16787.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
gi|148684841|gb|EDL16788.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
Length = 744
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|440899161|gb|ELR50510.1| Tripartite motif-containing protein 2, partial [Bos grunniens
mutus]
Length = 762
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 35 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 87
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 88 PEKGVAALQNNFFITNLMDVLQR 110
>gi|119625368|gb|EAX04963.1| tripartite motif-containing 2, isoform CRA_c [Homo sapiens]
Length = 770
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 43 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 95
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 96 PEKGVAALQNNFFITNLMDVLQR 118
>gi|411147443|ref|NP_109631.2| tripartite motif-containing protein 2 isoform 3 [Mus musculus]
gi|74184522|dbj|BAE27883.1| unnamed protein product [Mus musculus]
Length = 761
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 34 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 86
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 87 PEKGVAALQNNFFITNLMDVLQR 109
>gi|332217500|ref|XP_003257898.1| PREDICTED: tripartite motif-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|402870659|ref|XP_003899324.1| PREDICTED: tripartite motif-containing protein 2 isoform 1 [Papio
anubis]
Length = 771
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 44 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 96
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 97 PEKGVAALQNNFFITNLMDVLQR 119
>gi|33877724|gb|AAH11882.1| TRIM56 protein, partial [Homo sapiens]
Length = 379
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 83 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 133
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVA+ +F VN LLDL+
Sbjct: 134 VPVPPEGVASFKTNFFVNGLLDLVK 158
>gi|291401099|ref|XP_002716938.1| PREDICTED: tripartite motif-containing 2-like [Oryctolagus
cuniculus]
Length = 789
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 62 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 114
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 115 PEKGVAALQNNFFITNLMDVLQR 137
>gi|410038823|ref|XP_517485.4| PREDICTED: tripartite motif-containing protein 2 isoform 9 [Pan
troglodytes]
Length = 576
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 43 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQR 119
>gi|403272313|ref|XP_003928015.1| PREDICTED: tripartite motif-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 771
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 44 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 96
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 97 PEKGVAALQNNFFITNLMDVLQR 119
>gi|395735425|ref|XP_002815267.2| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2, partial [Pongo abelii]
Length = 794
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 67 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 119
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 120 PEKGVAALQNNFFITNLMDVLQR 142
>gi|354474614|ref|XP_003499525.1| PREDICTED: tripartite motif-containing protein 2 isoform 1
[Cricetulus griseus]
Length = 761
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 34 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 86
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 87 PEKGVAALQNNFFITNLMDVLQR 109
>gi|148683462|gb|EDL15409.1| tripartite motif protein 2, isoform CRA_b [Mus musculus]
Length = 761
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 34 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 86
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 87 PEKGVAALQNNFFITNLMDVLQR 109
>gi|380783255|gb|AFE63503.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783257|gb|AFE63504.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783259|gb|AFE63505.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783261|gb|AFE63506.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
Length = 771
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 44 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 96
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 97 PEKGVAALQNNFFITNLMDVLQR 119
>gi|297293537|ref|XP_001086769.2| PREDICTED: tripartite motif-containing protein 2 isoform 6 [Macaca
mulatta]
Length = 970
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 258 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 310
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 311 PEKGVAALQNNFFITNLMDVLQR 333
>gi|157818847|ref|NP_001102022.1| tripartite motif-containing protein 2 [Rattus norvegicus]
gi|149048249|gb|EDM00825.1| tripartite motif protein 2 [Rattus norvegicus]
Length = 761
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 34 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 86
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 87 PEKGVAALQNNFFITNLMDVLQR 109
>gi|3043558|dbj|BAA25443.1| KIAA0517 protein [Homo sapiens]
Length = 792
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 65 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 117
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 118 PEKGVAALQNNFFITNLMDVLQR 140
>gi|119625366|gb|EAX04961.1| tripartite motif-containing 2, isoform CRA_b [Homo sapiens]
Length = 783
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 43 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 95
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 96 PEKGVAALQNNFFITNLMDVLQR 118
>gi|354474616|ref|XP_003499526.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Cricetulus griseus]
Length = 770
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 43 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 95
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 96 PEKGVAALQNNFFITNLMDVLQR 118
>gi|74194308|dbj|BAE24679.1| unnamed protein product [Mus musculus]
Length = 770
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 43 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 95
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 96 PEKGVAALQNNFFITNLMDVLQR 118
>gi|411147437|ref|NP_001258654.1| tripartite motif-containing protein 2 isoform 1 [Mus musculus]
Length = 770
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 43 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 95
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 96 PEKGVAALQNNFFITNLMDVLQR 118
>gi|432093067|gb|ELK25357.1| Tripartite motif-containing protein 2 [Myotis davidii]
Length = 801
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|431918266|gb|ELK17493.1| Tripartite motif-containing protein 2 [Pteropus alecto]
Length = 711
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|397489908|ref|XP_003815955.1| PREDICTED: tripartite motif-containing protein 2-like, partial [Pan
paniscus]
Length = 536
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 66 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 118
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 119 LPEKGVAALQNNFFITNLMDVLQR 142
>gi|350587708|ref|XP_003357040.2| PREDICTED: tripartite motif-containing protein 2 [Sus scrofa]
Length = 744
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAYSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|260830180|ref|XP_002610039.1| hypothetical protein BRAFLDRAFT_99993 [Branchiostoma floridae]
gi|229295402|gb|EEN66049.1| hypothetical protein BRAFLDRAFT_99993 [Branchiostoma floridae]
Length = 624
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ FL C CL + PK LPC HT C CL A + + CP CR T+P
Sbjct: 13 DEFLQCWLCLDTFK----RPKALPCLHTFCERCLQDYAEERPK----FLCPYCRADTTLP 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQ 110
GGV ALP +F + + DL+ +Q
Sbjct: 65 EGGVTALPDNFWIVSMKDLLHKQ 87
>gi|344291681|ref|XP_003417562.1| PREDICTED: tripartite motif-containing protein 2 [Loxodonta
africana]
Length = 772
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 45 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 97
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 98 PEKGVAALQNNFFITNLMDVLQR 120
>gi|60360046|dbj|BAD90242.1| mKIAA0517 protein [Mus musculus]
Length = 787
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 60 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 112
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 113 PEKGVAALQNNFFITNLMDVLQR 135
>gi|327274049|ref|XP_003221791.1| PREDICTED: tripartite motif-containing protein 2-like [Anolis
carolinensis]
Length = 748
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GV+AL +F + L+D++ R + I + S
Sbjct: 70 PEKGVSALQNNFFITNLMDVLQRTPENSIEESS 102
>gi|26333433|dbj|BAC30434.1| unnamed protein product [Mus musculus]
Length = 558
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQR 109
>gi|444724164|gb|ELW64779.1| Tripartite motif-containing protein 2 [Tupaia chinensis]
Length = 786
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 59 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 111
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 112 PEKGVAALQNNFFITNLMDVLQR 134
>gi|47216281|emb|CAF96577.1| unnamed protein product [Tetraodon nigroviridis]
Length = 743
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y+ PK+LPC H+ C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYE----NPKVLPCLHSFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
>gi|260794878|ref|XP_002592434.1| hypothetical protein BRAFLDRAFT_67301 [Branchiostoma floridae]
gi|229277653|gb|EEN48445.1| hypothetical protein BRAFLDRAFT_67301 [Branchiostoma floridae]
Length = 409
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
LTCG CL Y PKLLPC+H+ C CL + + ++ CP CR+ + +P
Sbjct: 19 EMLTCGICLDTYT----RPKLLPCAHSFCEDCLQGMVGWRI----SMSCPNCRKDVKLPD 70
Query: 89 GGVAALPPSFLVNQLLDLMSRQR---------RHIIPKCSTHNSQ 124
GV LP +F V+ L ++S +R R +CSTH +
Sbjct: 71 TGVRGLPENFWVSNLRQVLSERRELEVRELGMRREGRECSTHEGE 115
>gi|348582200|ref|XP_003476864.1| PREDICTED: tripartite motif-containing protein 2-like [Cavia
porcellus]
Length = 887
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 160 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 212
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 213 PEKGVAALQNNFFITNLMDVLQR 235
>gi|74199723|dbj|BAE41519.1| unnamed protein product [Mus musculus]
Length = 717
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|260804475|ref|XP_002597113.1| hypothetical protein BRAFLDRAFT_215738 [Branchiostoma floridae]
gi|229282376|gb|EEN53125.1| hypothetical protein BRAFLDRAFT_215738 [Branchiostoma floridae]
Length = 88
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 8 ELTDEFLVCQICLEDF----KQPKVLPCLHTFCRPCLEKLLA--TEPVGKLNCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+P GV L +FLV +L D++ +
Sbjct: 62 PLPENGVKGLKSNFLVGKLHDILQEE 87
>gi|260823290|ref|XP_002604116.1| hypothetical protein BRAFLDRAFT_71596 [Branchiostoma floridae]
gi|229289441|gb|EEN60127.1| hypothetical protein BRAFLDRAFT_71596 [Branchiostoma floridae]
Length = 819
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ K+LPC HT C +CL A G +CPICR Q+ +P G
Sbjct: 16 LSCSICLELFT----RSKVLPCQHTFCQNCLQDHAG----RGGAFQCPICRRQVRLPTQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQIKKL 128
VA LP + + + + + +Q H+ +CS H ++ KL
Sbjct: 68 VAGLPDNLMAANMCEKLQKQENHLEEIREQPQSRNRCSFHPTEEVKL 114
>gi|260782164|ref|XP_002586161.1| hypothetical protein BRAFLDRAFT_109857 [Branchiostoma floridae]
gi|229271254|gb|EEN42172.1| hypothetical protein BRAFLDRAFT_109857 [Branchiostoma floridae]
Length = 580
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + + + + + Q
Sbjct: 68 VAGLPDNLMAANMCERLQNQ 87
>gi|395542524|ref|XP_003773179.1| PREDICTED: tripartite motif-containing protein 2 [Sarcophilus
harrisii]
Length = 744
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQI 125
P GV+AL +F + L+D++ R P +T S I
Sbjct: 70 PEKGVSALQNNFFITNLMDVLQR-----TPGSNTEESSI 103
>gi|291243269|ref|XP_002741525.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 273
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +E FL CG C Y PKLLPC H+ C CL ++ A ++ + + CP+CR +
Sbjct: 12 EEIDEDFLNCGICSDRY----TKPKLLPCQHSFCEECLVKVVA-KSGQPDVVVCPLCRRK 66
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
IP GG++ + + +NQL++
Sbjct: 67 HDIP-GGISKIEDNLFINQLVEAF 89
>gi|260810018|ref|XP_002599801.1| hypothetical protein BRAFLDRAFT_261406 [Branchiostoma floridae]
gi|229285083|gb|EEN55813.1| hypothetical protein BRAFLDRAFT_261406 [Branchiostoma floridae]
Length = 187
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 42 GGEHTPKLLPCSHTVCLHCLSRI-AASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
GG PK+LPC HT C CL ++ A T G L CP CR+ +P+ GV AL +FLV
Sbjct: 3 GGLRRPKILPCLHTFCQGCLEKLPVAKSTDGPGKLSCPTCRQDAALPKDGVRALKDNFLV 62
Query: 101 NQLLDLMSR 109
+L D+M +
Sbjct: 63 TKLSDVMKQ 71
>gi|402912301|ref|XP_003919580.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM56,
partial [Papio anubis]
Length = 552
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|321471259|gb|EFX82232.1| hypothetical protein DAPPUDRAFT_302663 [Daphnia pulex]
Length = 336
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCS--HTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E F+TCG CLC +D PK L CS HTVCL CL +I + T+ CP CRE +
Sbjct: 8 EDFITCGVCLCEFDDINRIPKFLQCSARHTVCLLCLRKII-----KNATVSCPFCRENFS 62
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
+ VA LP + V +L ++ I K
Sbjct: 63 L--ADVARLPSNGYVLHMLKFGKQKGNKPIDK 92
>gi|334331088|ref|XP_003341442.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2-like [Monodelphis domestica]
Length = 791
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 64 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 116
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQI 125
P GV+AL +F + L+D++ R P +T S I
Sbjct: 117 PEKGVSALQNNFFITNLMDVLQR-----TPGSNTEESSI 150
>gi|260822649|ref|XP_002606714.1| hypothetical protein BRAFLDRAFT_123141 [Branchiostoma floridae]
gi|229292058|gb|EEN62724.1| hypothetical protein BRAFLDRAFT_123141 [Branchiostoma floridae]
Length = 430
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 17 ETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR 76
E VS+ + + FL C C+ + PK+LPC H C CL+ AA +++
Sbjct: 6 EAVSLQTK-LTDDFLVCAICMDTF----VRPKVLPCQHRFCAACLTSYAAGRSQ----FP 56
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLD 105
CP+C++ + +P GGV ALP FLVN L++
Sbjct: 57 CPLCQQWVDLPWGGVDALPVDFLVNSLVE 85
>gi|256078016|ref|XP_002575294.1| trim56 protein [Schistosoma mansoni]
Length = 686
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT----LRCP 78
++ ++ FL C C Y PK L C HT C C+ + I+A T T CP
Sbjct: 68 QEIHDEFLVCKICFDSYTN----PKCLACLHTFCAKCIEKHISAEVTYNKYTDYRDFTCP 123
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+CR++ +P GGV LP +FL++ L DL+ RQR
Sbjct: 124 LCRKRTQLPLGGVKRLPDNFLISGLTDLVLRQR 156
>gi|353231497|emb|CCD77915.1| putative trim56 protein [Schistosoma mansoni]
Length = 725
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT----LRCP 78
++ ++ FL C C Y PK L C HT C C+ + I+A T T CP
Sbjct: 68 QEIHDEFLVCKICFDSYTN----PKCLACLHTFCAKCIEKHISAEVTYNKYTDYRDFTCP 123
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+CR++ +P GGV LP +FL++ L DL+ RQR
Sbjct: 124 LCRKRTQLPLGGVKRLPDNFLISGLTDLVLRQR 156
>gi|260825468|ref|XP_002607688.1| hypothetical protein BRAFLDRAFT_123268 [Branchiostoma floridae]
gi|229293037|gb|EEN63698.1| hypothetical protein BRAFLDRAFT_123268 [Branchiostoma floridae]
Length = 671
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
+FL C CL + PK+LPC HT C CL ++ Q T +CP CR ++P
Sbjct: 18 AFLECTICLEPFK----DPKVLPCLHTFCEGCLKKLVEQQDDAKDTFQCPTCRTDTSLPV 73
Query: 89 GGVAALPPSFLVNQLLDLMSRQR 111
GGVA L +F V L D + +
Sbjct: 74 GGVAFLKNNFFVQSLSDTVQTHK 96
>gi|326918225|ref|XP_003205391.1| PREDICTED: tripartite motif-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 235
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
+P GV+AL +F + L+D++ R + I + S
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRTPENSIEESS 102
>gi|345328741|ref|XP_001514346.2| PREDICTED: tripartite motif-containing protein 2 [Ornithorhynchus
anatinus]
Length = 871
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 144 DKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 196
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F + L+D++ R
Sbjct: 197 PEKGVSALQNNFFITNLMDVLQR 219
>gi|90075848|dbj|BAE87604.1| unnamed protein product [Macaca fascicularis]
Length = 229
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 42 QIDKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTS 94
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 95 ILPEKGVAALQNNFFITNLMDVLQR 119
>gi|260820335|ref|XP_002605490.1| hypothetical protein BRAFLDRAFT_126800 [Branchiostoma floridae]
gi|229290824|gb|EEN61500.1| hypothetical protein BRAFLDRAFT_126800 [Branchiostoma floridae]
Length = 728
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ E L+C C PK LPC HT C CL +A + + G +CP C +
Sbjct: 9 EEIQEDILSCPICYHQLT----EPKALPCQHTYCCKCLQELA--RRAKNGQFQCPECGKT 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+ IP GGV A P +FLV +LD + +
Sbjct: 63 VAIPTGGVEAFPTNFLVANVLDKVQQ 88
>gi|291233511|ref|XP_002736696.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 1052
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ +E FL+C CL +Y+ PK+LPC HT C CL A + G L+C CR Q
Sbjct: 364 EISEDFLSCSICLEIYN----NPKVLPCLHTFCQQCLVTFKA---KSGGILKCATCRIQC 416
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
P + L +F ++ LLD RQR
Sbjct: 417 NTP---IQELKSNFFLSSLLDTYQRQR 440
>gi|449277291|gb|EMC85526.1| Intraflagellar transport protein 80 like protein, partial [Columba
livia]
Length = 939
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET------GTLRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSIFE----DPRVLPCSHTFCRNCLEGVIHLSSNFSIWRPLRVPLKCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ IP G+ +LP +F + +++ ++ + CS H Q
Sbjct: 61 SIVEIPTSGIESLPINFALKAIIEKYQQEDPSDVATCSEHYRQ 103
>gi|327290340|ref|XP_003229881.1| PREDICTED: e3 ubiquitin-protein ligase TRIM56-like, partial [Anolis
carolinensis]
Length = 737
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-------- 74
+E FL+C CL + PK+LPC HT C CL + +T E
Sbjct: 54 WEALASGFLSCPICLERFS----QPKILPCLHTYCQGCLETLLDGRTEEEDAEEEEIEAE 109
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
LRCP CR + +P GGVAAL +F +N LLDL
Sbjct: 110 AQELRCPECRTWVPLPAGGVAALKTNFFINGLLDL 144
>gi|443698497|gb|ELT98473.1| hypothetical protein CAPTEDRAFT_177644 [Capitella teleta]
Length = 576
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGTLRCPICRE 82
E + LTC C YD E PK+LPC HT C C++R + R++G L CP CRE
Sbjct: 8 ERVGDELLTCSIC---YDHYEQ-PKVLPCLHTYCQKCIARHYEVHRLRQSGQLSCPSCRE 63
Query: 83 QITIPRGGVAAL 94
I P GG+AA
Sbjct: 64 LIKPPPGGIAAF 75
>gi|405976134|gb|EKC40653.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 740
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E FLTC CL ++ PK LPC H+ C C++ + + + CPICRE +P
Sbjct: 10 EDFLTCSICLEIFTD----PKTLPCLHSFCKDCVNNLTILEGACINSYSCPICRESFQLP 65
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRR 112
+GG L +F + L+D ++ ++
Sbjct: 66 KGGADDLKTNFCLKNLIDFVTSTKK 90
>gi|260792082|ref|XP_002591056.1| hypothetical protein BRAFLDRAFT_69390 [Branchiostoma floridae]
gi|229276256|gb|EEN47067.1| hypothetical protein BRAFLDRAFT_69390 [Branchiostoma floridae]
Length = 648
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PK+LPC HT CL CL +A G +CP+CR+Q+ +P
Sbjct: 16 LSCSVCLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGAFQCPVCRQQVRLPPQ 67
Query: 90 GVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
GVA LP + + + + + +R++ +CS H S+ KL
Sbjct: 68 GVAGLPDNLMAANMCERLQNQATLSGETREQPQSGNRCSFHPSEEVKL 115
>gi|358341002|dbj|GAA37251.2| E3 ubiquitin-protein ligase TRIM56, partial [Clonorchis sinensis]
Length = 387
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT----LRCP 78
++ ++ FL C CL Y+ PK L C HT C C+ + I+A T T CP
Sbjct: 68 QEIHDEFLVCKICLESYN----NPKCLSCLHTFCAACIDKHISAEVTYNKYTDYRDFTCP 123
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+CR++ +P GGV LP +FL++ L +L+ RQR
Sbjct: 124 LCRKRTQLPLGGVKRLPDNFLISGLTELVMRQR 156
>gi|355726021|gb|AES08738.1| tripartite motif protein TRIM2 [Mustela putorius furo]
Length = 133
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 31 QIDKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTS 83
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 84 ILPEKGVAALQNNFFITNLMDVLQR 108
>gi|291231763|ref|XP_002735833.1| PREDICTED: acetylcholinesterase-like [Saccoglossus kowalevskii]
Length = 1140
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+D NE+ L C C + +PK+LPC HT C CL + G L CP CR+
Sbjct: 16 DDINENVLLCAVCQERFT----SPKILPCVHTFCEKCLKTWVE---KNGGQLTCPTCRKS 68
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
IP GG+ AL + +N +L++ S
Sbjct: 69 HIIPPGGIGALNNNLFINDVLEMFS 93
>gi|156402828|ref|XP_001639792.1| predicted protein [Nematostella vectensis]
gi|156226922|gb|EDO47729.1| predicted protein [Nematostella vectensis]
Length = 747
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L CG C Y+ PK+LPC H+ C +CL + SQ R L CP C+ + +P G
Sbjct: 15 LVCGICQETYN----NPKVLPCLHSFCQNCLDKSIRSQER---VLVCPTCQCSVPVPAKG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
+ A P +F +N +L +++ Q
Sbjct: 68 IEAFPVNFFINNMLTVLAVQ 87
>gi|260833176|ref|XP_002611533.1| hypothetical protein BRAFLDRAFT_63830 [Branchiostoma floridae]
gi|229296904|gb|EEN67543.1| hypothetical protein BRAFLDRAFT_63830 [Branchiostoma floridae]
Length = 1310
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLEEFLKKQKVKT-DLDCPTCRSKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P GGVA L +F V L D + ++
Sbjct: 65 LPGGGVAELKDNFFVESLKDTVDVHKK 91
>gi|260785666|ref|XP_002587881.1| hypothetical protein BRAFLDRAFT_87268 [Branchiostoma floridae]
gi|229273036|gb|EEN43892.1| hypothetical protein BRAFLDRAFT_87268 [Branchiostoma floridae]
Length = 714
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ + G
Sbjct: 22 LTCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLQLQG 73
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
VA LP + + + + + +R++ +CS H S+ KL
Sbjct: 74 VAGLPDNIMAANMCERLQNQATLSGETRKQPQSGNRCSFHPSEKLKL 120
>gi|26338478|dbj|BAC32910.1| unnamed protein product [Mus musculus]
Length = 155
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQR 109
>gi|260782166|ref|XP_002586162.1| hypothetical protein BRAFLDRAFT_109858 [Branchiostoma floridae]
gi|229271255|gb|EEN42173.1| hypothetical protein BRAFLDRAFT_109858 [Branchiostoma floridae]
Length = 616
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPLQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
V LP + + + + + +R++ +CS H S+ KL
Sbjct: 68 VTGLPDNIMAANMCERLQNQATLSGETRKQPQSGNRCSFHPSEKLKL 114
>gi|260818146|ref|XP_002603945.1| hypothetical protein BRAFLDRAFT_102373 [Branchiostoma floridae]
gi|229289270|gb|EEN59956.1| hypothetical protein BRAFLDRAFT_102373 [Branchiostoma floridae]
Length = 433
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
LTC CL ++ PK+LPC HT CL CL +A GTL+C +CR+Q+ +PR
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGTLKCAVCRQQVRLPRQ 67
Query: 90 GVAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
GVA+LP + + + L +R++ +CS H ++ KL
Sbjct: 68 GVASLPDNLMAANMCEKLQNVTTLSGETREQPQSGNRCSFHPTEEVKL 115
>gi|410904543|ref|XP_003965751.1| PREDICTED: RING finger protein 183-like [Takifugu rubripes]
Length = 324
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
C C C YD TPKLL C HT CL CL+RI + E TL CPICRE +P G
Sbjct: 112 CAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSA-ELKTLSCPICRELTKLPHG 167
>gi|260833052|ref|XP_002611471.1| hypothetical protein BRAFLDRAFT_63895 [Branchiostoma floridae]
gi|229296842|gb|EEN67481.1| hypothetical protein BRAFLDRAFT_63895 [Branchiostoma floridae]
Length = 788
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL C CL + G PK+LPC HT C CL + Q CP CR +P G
Sbjct: 14 FLECTICLEPFKG----PKVLPCLHTFCEVCLEKFVTQQDAVKDKFPCPTCRTDTILPEG 69
Query: 90 GVAALPPSFLVNQLLD 105
GVA L +F + L D
Sbjct: 70 GVAGLKNNFFIQSLSD 85
>gi|260806460|ref|XP_002598102.1| hypothetical protein BRAFLDRAFT_85680 [Branchiostoma floridae]
gi|229283373|gb|EEN54114.1| hypothetical protein BRAFLDRAFT_85680 [Branchiostoma floridae]
Length = 851
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
++ DF E L+C CL ++ PK+LPC H C CL + TR G +CPICR
Sbjct: 293 HHHDFKEE-LSCCICLELFT----RPKVLPCGHIFCQGCLQNL----TRSGGAFKCPICR 343
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM--------SRQRRHIIPKCSTHNSQIKKL 128
+Q+ +P GV+ LP S + + + + +R++ +CS H S++ K+
Sbjct: 344 QQVRLPHHGVSCLPDSHNIANMCEKLRQNSSSEETREQPQSGNRCSFHPSEMIKV 398
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 17/112 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF E L+C CL ++ PK+LPC H C CL + TR G +CPICR+Q+
Sbjct: 11 DFKEE-LSCCICLELFT----RPKVLPCGHIFCQGCLQNL----TRSGGAFKCPICRQQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLM--------SRQRRHIIPKCSTHNSQIKKL 128
+P GV+ LP S + + + + +R++ +CS H S++ K+
Sbjct: 62 RLPHHGVSCLPDSHNIANMCEKLRQNSSSEETREQPQSGNRCSFHPSEMIKV 113
>gi|260782170|ref|XP_002586164.1| hypothetical protein BRAFLDRAFT_255110 [Branchiostoma floridae]
gi|229271257|gb|EEN42175.1| hypothetical protein BRAFLDRAFT_255110 [Branchiostoma floridae]
Length = 225
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
F E LTC CL ++ PK+LPC HT C CL +A+ + +CP CR+Q+
Sbjct: 11 QFKEE-LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASRKV----LFQCPNCRQQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
T+P GVA LP + LV L + + Q
Sbjct: 62 TLPTQGVAGLPQNHLVTSLCERLQNQ 87
>gi|62122935|ref|NP_001014393.1| tripartite motif-containing protein 2 [Danio rerio]
gi|61402577|gb|AAH91789.1| Zgc:113099 [Danio rerio]
Length = 744
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y+ PK+LPC HT C CL + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYN----NPKVLPCLHTFCERCLQNYIPPHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L++++ +
Sbjct: 70 PEKGVAALQSNFFITNLMEVLKK 92
>gi|348527598|ref|XP_003451306.1| PREDICTED: RING finger protein 183-like [Oreochromis niloticus]
Length = 320
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
C C C YD TPKLL C HT CL CL+RI + + E TL CP+CRE +P G
Sbjct: 109 CAVCFCTYDNVFKTPKLLACGHTFCLECLARINVT-SPELKTLSCPVCREVTELPHG 164
>gi|321471271|gb|EFX82244.1| hypothetical protein DAPPUDRAFT_302646 [Daphnia pulex]
Length = 536
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
+D N+ F+TCG CL YD PK LPCSHT+CL CL + T ++ CP CR
Sbjct: 5 DDDNDDFVTCGVCLWEYDEEIRKPKFLPCSHTICLLCLQGLVQGTT--IKSITCPFCR 60
>gi|260822978|ref|XP_002603960.1| hypothetical protein BRAFLDRAFT_71752 [Branchiostoma floridae]
gi|229289285|gb|EEN59971.1| hypothetical protein BRAFLDRAFT_71752 [Branchiostoma floridae]
Length = 629
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A + +CP CR+Q+ +P G
Sbjct: 38 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAGRER----AFQCPNCRQQVRLPPQG 89
Query: 91 VAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
VA LP ++LV L L +R++ +CS H S++ +L
Sbjct: 90 VAGLPDNYLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEVLEL 136
>gi|291233509|ref|XP_002736695.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1445
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D +E FL+C CL +Y PK+LPC HT C CL A + G L+C CR Q
Sbjct: 14 DISEDFLSCSICLEIY----KNPKVLPCLHTFCQQCLVTFKA---KSGGVLKCATCRIQC 66
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F ++ LLD RQR+
Sbjct: 67 DTP---IQELKSNFFLSSLLDTYQRQRQ 91
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ NE FL+C CL +Y P +LPC HT C CL + A + G L+C CR Q
Sbjct: 732 DEINEDFLSCSICLDIY----KNPTVLPCLHTFCQQCLVTLKA---KSGGVLKCATCRIQ 784
Query: 84 ITIPRGGVAALPPSFLVNQLL 104
P + L + ++ LL
Sbjct: 785 CDTP---IKKLKSNLFLSSLL 802
>gi|348518664|ref|XP_003446851.1| PREDICTED: tripartite motif-containing protein 3-like [Oreochromis
niloticus]
Length = 748
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL E+ TL CP+CR+ +
Sbjct: 17 DKQFLVCSICLDHY----RNPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GV AL +F + L++++ R P+CS
Sbjct: 70 PEKGVCALQNNFFITNLMEVLQRD-----PECS 97
>gi|260811664|ref|XP_002600542.1| hypothetical protein BRAFLDRAFT_205327 [Branchiostoma floridae]
gi|229285829|gb|EEN56554.1| hypothetical protein BRAFLDRAFT_205327 [Branchiostoma floridae]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 37 LCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPP 96
+CM D + P++LPC HT C CL A Q L CP CR Q+++P GV L
Sbjct: 13 ICMQDFRD--PRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQVSLPDQGVDGLRT 66
Query: 97 SFLVNQLLDLMSRQR 111
+F VN LLD + ++
Sbjct: 67 NFYVNSLLDFAAAKK 81
>gi|260785670|ref|XP_002587883.1| hypothetical protein BRAFLDRAFT_87270 [Branchiostoma floridae]
gi|229273038|gb|EEN43894.1| hypothetical protein BRAFLDRAFT_87270 [Branchiostoma floridae]
Length = 624
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL A+ + +CP CR+Q+ +PR G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDHASRKV----PFQCPNCRQQVRLPRQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
VA LP + + + + + +R++ +CS H S+ KL
Sbjct: 68 VAGLPDNIMAANMCERLQNQATLSGETRKQPQSGNRCSFHPSEKLKL 114
>gi|321471265|gb|EFX82238.1| hypothetical protein DAPPUDRAFT_316914 [Daphnia pulex]
Length = 399
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
E F+TCG C +D + PK LPC+HTVCL CL + R+ + CP CRE I
Sbjct: 8 EDFVTCGVCFYQFDDFDRKPKFLPCAHTVCLSCLKEM-----RKGHLITCPFCREMI 59
>gi|260826057|ref|XP_002607982.1| hypothetical protein BRAFLDRAFT_213523 [Branchiostoma floridae]
gi|229293332|gb|EEN63992.1| hypothetical protein BRAFLDRAFT_213523 [Branchiostoma floridae]
Length = 749
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE-Q 83
D + FL C CL + PK+LPC HT C CL ++ A + G L CP CR+
Sbjct: 8 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLEKLLAIEP--VGKLDCPTCRQGA 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GV L +FLV +L D++
Sbjct: 62 VPLPENGVQGLKSNFLVGKLRDIL 85
>gi|156364546|ref|XP_001626408.1| predicted protein [Nematostella vectensis]
gi|156213283|gb|EDO34308.1| predicted protein [Nematostella vectensis]
Length = 754
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E N+ L C CL P+LL C HT C C+ RI S + +L CP CR++
Sbjct: 9 EQINDQ-LVCAICLDRL----VEPRLLICMHTFCTPCIQRI--SNNDASASLTCPTCRKE 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQ 110
IP GV +L +F VNQ+LD++ +
Sbjct: 62 TPIPETGVESLHLNFFVNQMLDVVRHK 88
>gi|47227079|emb|CAG00441.1| unnamed protein product [Tetraodon nigroviridis]
Length = 774
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y TPK+LPC HT C CL E+ TL CP+CR+ +
Sbjct: 17 DKQFLVCSICLDHY----RTPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQ 110
P GV AL +F + L++++ R
Sbjct: 70 PEKGVCALQNNFFITNLMEVLQRD 93
>gi|443725877|gb|ELU13277.1| hypothetical protein CAPTEDRAFT_146224, partial [Capitella teleta]
Length = 122
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-TLRCPICRE 82
E+ E L C C ++D +H PK LPC HT C CL R+ G + CP CR+
Sbjct: 6 EENYEHVLMCLICRSLFDDNDHQPKFLPCHHTFCKDCLREY----VRQIGEEIECPSCRK 61
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMS 108
T+P GV+AL +F V + +L+
Sbjct: 62 VATVPTAGVSALQTNFYVKYIHNLVQ 87
>gi|291230141|ref|XP_002735026.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 728
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL CG CL Y TPK+LPC HT C CL + +L CPICR+
Sbjct: 12 KQIDKQFLKCGICLERY----RTPKVLPCLHTFCQKCLQNYIPPHSL---SLSCPICRQT 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+P GV+ L +F + L++++
Sbjct: 65 SILPEEGVSGLQNNFFITNLMEVL 88
>gi|291226103|ref|XP_002733038.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 675
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S + E +E FL C CL + PK+LPC H+ C CL I+ S T+ CP+
Sbjct: 5 SFSREQLDERFLQCPICLDRF----RKPKILPCFHSFCRECLVSISKSGK---NTVTCPL 57
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMS 108
R +P G+ LP S+ +N L+D +
Sbjct: 58 DRRLHKLPPNGINGLPDSYFLNDLMDFID 86
>gi|260825462|ref|XP_002607685.1| hypothetical protein BRAFLDRAFT_82869 [Branchiostoma floridae]
gi|229293034|gb|EEN63695.1| hypothetical protein BRAFLDRAFT_82869 [Branchiostoma floridae]
Length = 728
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL C CL + PK+LPC HT C CL + A Q + +CP CR + +P+G
Sbjct: 32 FLECTICLEPFK----DPKVLPCLHTFCEGCLKKFIA-QDKVKNKFQCPTCRTETVLPKG 86
Query: 90 GVAALPPSFLVNQLLDLMSRQR 111
GV+ L +F V L D + +
Sbjct: 87 GVSKLKNNFFVQSLSDTIDTHK 108
>gi|260825466|ref|XP_002607687.1| hypothetical protein BRAFLDRAFT_82867 [Branchiostoma floridae]
gi|229293036|gb|EEN63697.1| hypothetical protein BRAFLDRAFT_82867 [Branchiostoma floridae]
Length = 862
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL C CL + PK+LPC HT C CL + A Q + CP CR + +P+G
Sbjct: 31 FLECTICLEPFK----DPKVLPCLHTFCEGCLKKFVA-QDKVKNKFLCPTCRTETILPKG 85
Query: 90 GVAALPPSFLVNQLLDLMSRQR 111
GVA+ +F V L D + +
Sbjct: 86 GVASFKNNFFVQSLSDTVQTHK 107
>gi|260816137|ref|XP_002602828.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
gi|229288141|gb|EEN58840.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
Length = 348
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F E ++CG CL + PK+LPC HT C CL A G LRCP CR ++
Sbjct: 10 FPEDSMSCGICLQPF----KRPKILPCGHTFCEECLVEAA------RGGLRCPTCRVRVP 59
Query: 86 IPRGGVAALPPSFLVNQL 103
+ +GGVAALP ++ V ++
Sbjct: 60 L-KGGVAALPNNYQVTEM 76
>gi|260782498|ref|XP_002586323.1| hypothetical protein BRAFLDRAFT_108978 [Branchiostoma floridae]
gi|229271426|gb|EEN42334.1| hypothetical protein BRAFLDRAFT_108978 [Branchiostoma floridae]
Length = 619
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + + PK+LPC HT C +CL A + T CP CR + +P G
Sbjct: 16 VTCSICLELIN----RPKMLPCQHTFCQNCLQEFAGREV----TFECPYCRLPVNLPSEG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V LP + L+ L + + +Q
Sbjct: 68 VEGLPGNLLITSLCERLKKQ 87
>gi|260833184|ref|XP_002611537.1| hypothetical protein BRAFLDRAFT_63825 [Branchiostoma floridae]
gi|229296908|gb|EEN67547.1| hypothetical protein BRAFLDRAFT_63825 [Branchiostoma floridae]
Length = 3500
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E ++ F+ C C + PK+LPC HT C HCL Q + T CP CREQ
Sbjct: 3046 EKVSDDFIQCTICCYNF----KKPKVLPCLHTFCAHCLQEWV--QKNDDNTFPCPTCREQ 3099
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ +P GV L +F + L+ ++ +
Sbjct: 3100 VHLPENGVEGLKDNFFLASLVKAVTEHHK 3128
>gi|443716539|gb|ELU08021.1| hypothetical protein CAPTEDRAFT_187752 [Capitella teleta]
Length = 630
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
V NYE E LTC CL +Y P +LPCSH+VC CL I S++++ G L CP
Sbjct: 38 VEFNYESMEEE-LTCPVCLELY----ADPLMLPCSHSVCKKCLHDILDSKSKQ-GGLECP 91
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
CR+ + + + +LP + + ++ + +R I K + S I L
Sbjct: 92 SCRKVVDVNHDKMESLPKNLALENIVFRYTEERSKSIRKSLSLESPISDL 141
>gi|260817088|ref|XP_002603419.1| hypothetical protein BRAFLDRAFT_80400 [Branchiostoma floridae]
gi|229288738|gb|EEN59430.1| hypothetical protein BRAFLDRAFT_80400 [Branchiostoma floridae]
Length = 637
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL + Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLEELLKKQKLKT-ELDCPSCRSKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P GGVA L +F V L D + ++
Sbjct: 65 LPGGGVAGLKDNFFVESLKDTVDVHKK 91
>gi|341902461|gb|EGT58396.1| hypothetical protein CAEBREN_09977 [Caenorhabditis brenneri]
Length = 113
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 31 LTCGTCLCMYDG--GEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
L C CL Y +P++L C HTVC C+ I ASQ +RCP C+++ +P
Sbjct: 30 LKCNVCLLKYSATSKNRSPRILANCGHTVCFGCIKNITASQK----VVRCPFCKKRTNMP 85
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHI 114
G V LP ++ + L++ M++++ I
Sbjct: 86 HGTVKKLPKNYAIIGLIEEMNKEKNEI 112
>gi|260825464|ref|XP_002607686.1| hypothetical protein BRAFLDRAFT_82868 [Branchiostoma floridae]
gi|229293035|gb|EEN63696.1| hypothetical protein BRAFLDRAFT_82868 [Branchiostoma floridae]
Length = 867
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL C CL + PK+LPC HT C CL + A Q + +CP CR +P+G
Sbjct: 32 FLECTICLEPFK----DPKVLPCLHTFCEGCLKKFIA-QDKVKNKFQCPTCRTDTVLPKG 86
Query: 90 GVAALPPSFLVNQLLDLMSRQR 111
GV+ L +F V L D + +
Sbjct: 87 GVSKLKNNFFVQSLSDTIETHK 108
>gi|119589118|gb|EAW68712.1| tripartite motif-containing 3, isoform CRA_d [Homo sapiens]
gi|119589119|gb|EAW68713.1| tripartite motif-containing 3, isoform CRA_d [Homo sapiens]
Length = 511
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQ 91
>gi|432896009|ref|XP_004076255.1| PREDICTED: tripartite motif-containing protein 3-like [Oryzias
latipes]
Length = 752
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL E+ TL CP+CR+ +
Sbjct: 21 DKQFLVCSICLDHY----CNPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSIL 73
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCS 119
P GV AL +F + L++++ R+ P+CS
Sbjct: 74 PEKGVCALQNNFFITNLMEVLQRE-----PECS 101
>gi|260818172|ref|XP_002603958.1| hypothetical protein BRAFLDRAFT_71754 [Branchiostoma floridae]
gi|229289283|gb|EEN59969.1| hypothetical protein BRAFLDRAFT_71754 [Branchiostoma floridae]
Length = 587
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A G +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDLAG----RGGAFQCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
V LP + LV L L +R++ +CS H S++ K+
Sbjct: 68 VKGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEVLKV 114
>gi|260794818|ref|XP_002592404.1| hypothetical protein BRAFLDRAFT_67269 [Branchiostoma floridae]
gi|229277623|gb|EEN48415.1| hypothetical protein BRAFLDRAFT_67269 [Branchiostoma floridae]
Length = 598
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A G +CP CR+Q+ +P
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQGCLQDLAG----RGGPFQCPNCRQQVELPPQE 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR 112
VA LP S ++ L +++ Q R
Sbjct: 68 VAGLPDSHIIANLCEMLQTQAR 89
>gi|260782162|ref|XP_002586160.1| hypothetical protein BRAFLDRAFT_255114 [Branchiostoma floridae]
gi|229271253|gb|EEN42171.1| hypothetical protein BRAFLDRAFT_255114 [Branchiostoma floridae]
Length = 213
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +PR G
Sbjct: 4 LSCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPRQG 55
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V LP + + + + + Q
Sbjct: 56 VTGLPDNIMAANMCERLQNQ 75
>gi|17509101|ref|NP_491266.1| Protein T20F5.6 [Caenorhabditis elegans]
gi|351060151|emb|CCD67781.1| Protein T20F5.6 [Caenorhabditis elegans]
Length = 794
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-TLRCPICREQ----IT 85
L+CG C ++ G+ PK+ PC HT+CL C+ ++ ++T G T+ CP CR+ +T
Sbjct: 114 LSCGICYDPFNTGKRIPKVFPCGHTICLQCIKKLLNTRTFLGGNTVICPSCRQNTRYSLT 173
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIP---KCSTHNSQIKKL 128
P +P +F + LL+ +++ P KC+ ++ + +
Sbjct: 174 TP---ADKIPTNFCIQSLLEQRQQEKSTKEPEAVKCTECHTTVSAI 216
>gi|221042794|dbj|BAH13074.1| unnamed protein product [Homo sapiens]
Length = 741
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>gi|260806410|ref|XP_002598077.1| hypothetical protein BRAFLDRAFT_85706 [Branchiostoma floridae]
gi|229283348|gb|EEN54089.1| hypothetical protein BRAFLDRAFT_85706 [Branchiostoma floridae]
Length = 632
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL A + +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLRDHAEVKI----PFQCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQIKKL 128
VA LP + +V +++ + +Q +++ +CS H ++ KL
Sbjct: 68 VAGLPDNHIVANMIEKLQKQEKNLEETTEQPQSGNRCSFHPTEEVKL 114
>gi|405970482|gb|EKC35381.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 442
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 29 SFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+FL+C C+ EH PK LPC HT C CL S+ G CPICR+ + I
Sbjct: 13 TFLSCSICM------EHFKKPKALPCLHTFCEDCLRDYIVSRFESAGQFPCPICRQLVYI 66
Query: 87 PRGGVAALPPSFLVNQLLDLMS 108
P GV P + + L D ++
Sbjct: 67 PPNGVYGFPDNHFILSLQDTVT 88
>gi|390332990|ref|XP_003723615.1| PREDICTED: uncharacterized protein LOC100891477 [Strongylocentrotus
purpuratus]
Length = 750
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C+ PK L C HT C CL + + +G +RCP+CRE T+PR G
Sbjct: 13 LVCAVCMNTLK----NPKSLSCRHTFCEECLKQCDEASQGRSGGIRCPMCREVTTLPRVG 68
Query: 91 VAALPPSFLVNQLLDLMSRQR 111
VA L + L+ ++L+++ ++
Sbjct: 69 VAGLKSNPLIYRVLEVLEAKK 89
>gi|260792768|ref|XP_002591386.1| hypothetical protein BRAFLDRAFT_86893 [Branchiostoma floridae]
gi|229276591|gb|EEN47397.1| hypothetical protein BRAFLDRAFT_86893 [Branchiostoma floridae]
Length = 611
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E F+E LTC CL ++ PK+LPC HT+C CL + ++ RCP CR Q
Sbjct: 10 ELFHEE-LTCSICLELFT----RPKVLPCQHTLCEDCLQDLMIAKKYR----RCPNCRRQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQ 110
+ +P GVA LP + + + + + Q
Sbjct: 61 VRLPGKGVAGLPDNLMAANMCEGLRNQ 87
>gi|390335759|ref|XP_003724215.1| PREDICTED: uncharacterized protein LOC590474 [Strongylocentrotus
purpuratus]
Length = 813
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL ++ PKLLPC HT+CL C+ + + ++CP CR+Q T P
Sbjct: 8 LLECPMCLELFTSSSRKPKLLPCQHTLCLECMDML-----NQGNRIQCPQCRQQHTCPGD 62
Query: 90 GVAALPPSFLVNQLLDLMSR 109
G A LP +F + LLD+ +
Sbjct: 63 GPAQLPNNFTMLALLDVQQK 82
>gi|291226350|ref|XP_002733156.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 378
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
N+ FL C C +D E PK+LPC H+ C+ CL ++ ++ T+ CP CR++
Sbjct: 13 INDEFLKCPVC---FDHCE-KPKVLPCLHSFCMKCLEKLVKDGSK---TVECPKCRQEEI 65
Query: 86 IPRGGVAALPPSFLVNQLLDLMS 108
+P G+ L +F ++ L + MS
Sbjct: 66 LPENGIHGLQDNFFISDLAESMS 88
>gi|260785668|ref|XP_002587882.1| hypothetical protein BRAFLDRAFT_87269 [Branchiostoma floridae]
gi|229273037|gb|EEN43893.1| hypothetical protein BRAFLDRAFT_87269 [Branchiostoma floridae]
Length = 618
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G +CP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGAFQCPNCRQQVRLPCNG 67
Query: 91 VAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
VA LP + LV L L +R++ +CS H S+ KL
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGETREQPQSGHRCSFHPSEKLKL 114
>gi|410932203|ref|XP_003979483.1| PREDICTED: tripartite motif-containing protein 3-like [Takifugu
rubripes]
Length = 711
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL E+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----RNPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GV AL +F + L++++ R
Sbjct: 69 LPEKGVCALQNNFFITNLMEVLQR 92
>gi|334347428|ref|XP_001370166.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 502
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG--TLRCPICREQIT 85
E+ LTC C +++ P++LPCSHT C +CL I + G + CP CR I
Sbjct: 5 EAELTCSICYSIFE----DPRVLPCSHTFCRNCLENILQASGNFYGRRDITCPTCRHIIE 60
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
IP G+ +LP +F + +++ ++ CS H+SQ
Sbjct: 61 IPPPGIDSLPINFALRAIIEKYEQEEHPDGITCSEHSSQ 99
>gi|149641196|ref|XP_001510595.1| PREDICTED: tripartite motif-containing protein 59-like
[Ornithorhynchus anatinus]
Length = 403
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRTCLENVLQASSNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
++ IP+ G+ +LP +F + +++ ++ I C+ H+ Q
Sbjct: 61 SRVEIPQSGIESLPVNFALRAIIEKYQQEDHPDIVTCAEHHGQ 103
>gi|115707256|ref|XP_787393.2| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 695
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
M+++LS S L + +E FL C C + PK+LPC H+ C CL R
Sbjct: 1 MAASLSQLSVLSQ--------ISEEFLLCQVCFERFS----KPKVLPCLHSFCEACLLRY 48
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
A + T+RCP+CR++ +P GV+ L +F + L D+ +
Sbjct: 49 APDGSH---TIRCPLCRQESELPENGVSGLADNFFILNLSDVFT 89
>gi|260818134|ref|XP_002603939.1| hypothetical protein BRAFLDRAFT_102380 [Branchiostoma floridae]
gi|229289264|gb|EEN59950.1| hypothetical protein BRAFLDRAFT_102380 [Branchiostoma floridae]
Length = 714
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PK+LPC HT CL CL +A G L+C ICR+Q+ +P
Sbjct: 18 LSCSICLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGALKCAICRQQVRLPPQ 69
Query: 90 GVAALPPSFLVNQLLDLMSRQ 110
GVA LP + LV L + + Q
Sbjct: 70 GVAGLPDNHLVTSLCERLQNQ 90
>gi|291243265|ref|XP_002741523.1| PREDICTED: tripartite motif-containing 28 protein-like
[Saccoglossus kowalevskii]
Length = 263
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E +E FL CG C Y PKLLPC H+ C CL ++ A ++ + + CP+CR +
Sbjct: 12 EKIDEDFLNCGICSDRYTK----PKLLPCQHSFCEECLVKVVA-KSGQPDVIICPLCRRE 66
Query: 84 ITIPRGGVAALPPSFLVNQLLD 105
I GG++ + + +NQL++
Sbjct: 67 HDI-HGGISKIENNMFINQLVE 87
>gi|291241921|ref|XP_002740858.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 701
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y PK+LPC HT C CL + + G L+C CR Q
Sbjct: 12 DEVTEDFLSCSICLEIYK----NPKVLPCLHTYCQQCL---VTFKVKSGGVLKCATCRIQ 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD RQR+
Sbjct: 65 CDSP---IEELKSNFFLTSLLDTFQRQRQ 90
>gi|443724901|gb|ELU12702.1| hypothetical protein CAPTEDRAFT_129838, partial [Capitella teleta]
Length = 192
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-------TLRC 77
+ + FL C C +Y PK L C HT C CL + ++ + + C
Sbjct: 10 EIYDQFLLCKICYEIY----KRPKTLICLHTFCSDCLEKHQDAEVERSYRYMLYSRAISC 65
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
PICR++ +P GGV LP +FLV+ L D+++R R
Sbjct: 66 PICRKKTELPSGGVCRLPDNFLVDNLTDVVNRSR 99
>gi|198420733|ref|XP_002119582.1| PREDICTED: similar to zinc finger protein ZF(Bbox/RING)-1 [Ciona
intestinalis]
Length = 993
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
N+ FLTC CL Y P LL C H+ C C+ + + + GTL CP+CR+ +
Sbjct: 11 LNDEFLTCQICLSTY----TEPVLLDCQHSFCRSCVGQCLPAVS---GTLHCPVCRQATS 63
Query: 86 IPRG-GVAALPPSFLVNQLLDLMSRQRRHI 114
+P+ GVA L +F + L+D + +R +
Sbjct: 64 LPKKFGVATLKSNFFLQSLIDAVKERRSSV 93
>gi|301613881|ref|XP_002936431.1| PREDICTED: RING finger protein 183-like [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 14 TLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRE 71
T + I+ + +S L C C YD TPKLL CSHT+CL C++R+ A+ ++
Sbjct: 5 TEIWHTQIDTAEDPDSRLECSICFTKYDNIFKTPKLLQCSHTLCLECVARLVAALPPEKQ 64
Query: 72 TGTLRCPICREQITIPRGGVAAL 94
+ CP CR+ IP G AL
Sbjct: 65 AEDVLCPFCRQPTHIPDDGAPAL 87
>gi|405969566|gb|EKC34528.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 852
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
++++ S +D + FL C C +D EHTP++LPC HT C CL + +
Sbjct: 120 ILQSASRKIDDLKDDFLNCEVCKSEFDDNEHTPRVLPCLHTFCNRCLEKHVRDR-----F 174
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP 116
+ CP C+ Q +P V P L + +R+ IP
Sbjct: 175 VYCPSCKTQHALPNNRVLNFPKEHTRLTLKGFVQLKRKTKIP 216
>gi|291225322|ref|XP_002732649.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1079
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y PK+LPC HT C CL + + G L+C CR Q
Sbjct: 12 DEVTEDFLSCSICLEIYK----NPKVLPCLHTFCQQCL---VTFKDKSGGVLKCATCRIQ 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD +QR+
Sbjct: 65 CDTP---IQELKSNFFLTSLLDTFQKQRQ 90
>gi|260824810|ref|XP_002607360.1| hypothetical protein BRAFLDRAFT_69766 [Branchiostoma floridae]
gi|229292707|gb|EEN63370.1| hypothetical protein BRAFLDRAFT_69766 [Branchiostoma floridae]
Length = 627
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
LTCG C ++ PK+LPC HT CL CL +A G +CPICR+Q+++P
Sbjct: 16 LTCGICKDLFT----KPKVLPCQHTFCLSPCLENLAG----RGGAFQCPICRQQVSLPPQ 67
Query: 90 GVAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
GV P + + + L +R++ +CS H S+ KL
Sbjct: 68 GVTGFPDNLMAANMCESLRNEATLSGETREQPQSGHRCSFHPSEEVKL 115
>gi|291236420|ref|XP_002738137.1| PREDICTED: tripartite motif-containing 2-like [Saccoglossus
kowalevskii]
Length = 421
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+D +E L C C + +PK+LPC HT C CL ++ G L CP CR+
Sbjct: 15 DDIDEKILLCPICQERFT----SPKILPCVHTFCEKCLKSWIE---KKYGKLTCPSCRKP 67
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
IP GGV L + +N++L++ S+
Sbjct: 68 HVIPPGGVRELNNNLFINEMLEMFSK 93
>gi|260818737|ref|XP_002604539.1| hypothetical protein BRAFLDRAFT_148637 [Branchiostoma floridae]
gi|229289866|gb|EEN60550.1| hypothetical protein BRAFLDRAFT_148637 [Branchiostoma floridae]
Length = 226
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTCG CL ++ PK+LPC HT C CL +A G +CPICR+Q+ +P
Sbjct: 17 LTCGICLELFT----RPKVLPCQHTFCQDCLQDLAGR----AGAFQCPICRQQVRLPPQR 68
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V LP + + + + + Q
Sbjct: 69 VPGLPDNLIAANMCERLQNQ 88
>gi|260833174|ref|XP_002611532.1| hypothetical protein BRAFLDRAFT_63831 [Branchiostoma floridae]
gi|229296903|gb|EEN67542.1| hypothetical protein BRAFLDRAFT_63831 [Branchiostoma floridae]
Length = 272
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E ++ F+ C +C Y+ + PK+LPC HT C HCL Q + T CP CREQ
Sbjct: 8 EKVSDDFIQCT--ICCYNFKK--PKVLPCLHTFCAHCLQEWV--QKNDGNTFPCPTCREQ 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ +P GV L +F + L+ ++ +
Sbjct: 62 VHLPENGVEGLKDNFFLASLVKAVTEHHK 90
>gi|260820337|ref|XP_002605491.1| hypothetical protein BRAFLDRAFT_92912 [Branchiostoma floridae]
gi|229290825|gb|EEN61501.1| hypothetical protein BRAFLDRAFT_92912 [Branchiostoma floridae]
Length = 603
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E L+C C + PK LPC HT C CL +A R CP CR+
Sbjct: 8 QEIQEDVLSCPIC----NHQLTEPKALPCQHTYCCKCLQELAKRTDRRR--FPCPECRKM 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
++IP GV A P +FLV +L+ + +
Sbjct: 62 VSIPSQGVEAFPTNFLVANVLEKVQHHK 89
>gi|260823286|ref|XP_002604114.1| hypothetical protein BRAFLDRAFT_71598 [Branchiostoma floridae]
gi|229289439|gb|EEN60125.1| hypothetical protein BRAFLDRAFT_71598 [Branchiostoma floridae]
Length = 492
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICRE 82
E F E LTC CL ++ PK+L C HT CL CL + G L+CPI R+
Sbjct: 10 EHFREE-LTCSICLELFT----RPKVLRCGHTFCLSPCLENLVG----RGGALKCPIGRQ 60
Query: 83 QITIPRGGVAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
Q+ +P GVA LP S ++ + L +R++ + +CS H S++ K+
Sbjct: 61 QVRLPPQGVAGLPDSHIIANMCERLRQQTSLSGETREQPQSVNRCSFHPSEVLKV 115
>gi|355726070|gb|AES08754.1| tripartite motif-containing 3 [Mustela putorius furo]
Length = 162
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 8 TLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS 67
++ T + ++ + ++ FL C CL Y PK+LPC HT C CL +
Sbjct: 3 SVGTMAKREDSPGPEVQPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPA 58
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR 109
Q+ TL CP+CR+ +P GV+AL +F ++ L++ M +
Sbjct: 59 QSL---TLSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQ 97
>gi|268574858|ref|XP_002642408.1| C. briggsae CBR-NHL-1 protein [Caenorhabditis briggsae]
Length = 979
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|341877854|gb|EGT33789.1| CBN-NHL-1 protein [Caenorhabditis brenneri]
Length = 976
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|17553622|ref|NP_499028.1| Protein NHL-1 [Caenorhabditis elegans]
gi|6226931|sp|Q03601.2|NHL1_CAEEL RecName: Full=RING finger protein nhl-1
gi|3877606|emb|CAA79562.1| Protein NHL-1 [Caenorhabditis elegans]
Length = 974
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|260792766|ref|XP_002591385.1| hypothetical protein BRAFLDRAFT_86892 [Branchiostoma floridae]
gi|229276590|gb|EEN47396.1| hypothetical protein BRAFLDRAFT_86892 [Branchiostoma floridae]
Length = 639
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL A + G +CP CR + +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----KGGAFQCPNCRLKFKLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + LV L + + Q
Sbjct: 68 VAGLPNNHLVTSLCERLQNQ 87
>gi|308501841|ref|XP_003113105.1| CRE-NHL-1 protein [Caenorhabditis remanei]
gi|308265406|gb|EFP09359.1| CRE-NHL-1 protein [Caenorhabditis remanei]
Length = 986
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|260818719|ref|XP_002604530.1| hypothetical protein BRAFLDRAFT_79377 [Branchiostoma floridae]
gi|229289857|gb|EEN60541.1| hypothetical protein BRAFLDRAFT_79377 [Branchiostoma floridae]
Length = 595
Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL + + +CP CR Q+++P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLRDLVGGRR----NFQCPNCRRQVSLPGRG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V LP + LV L + + +Q
Sbjct: 68 VFGLPDNHLVTNLCEALQKQ 87
>gi|449689363|ref|XP_002155572.2| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Hydra
magnipapillata]
Length = 753
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL +D PKLL C H+ C CL +I + + + CP CRE IP G
Sbjct: 17 LVCAICLERFD----DPKLLNCLHSFCCQCLHKII--NQKPSDVIECPTCREVTKIPING 70
Query: 91 VAALPPSFLVNQLLDLM 107
+ L +F +N LLDL+
Sbjct: 71 LKELKTNFFINSLLDLV 87
>gi|260792776|ref|XP_002591390.1| hypothetical protein BRAFLDRAFT_86897 [Branchiostoma floridae]
gi|229276595|gb|EEN47401.1| hypothetical protein BRAFLDRAFT_86897 [Branchiostoma floridae]
Length = 468
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G +CP CR++ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGAFQCPNCRQEGRLPPQG 67
Query: 91 VAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQIKKL 128
VA LP + LV L L + +R++ +C H S++ +L
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSVETREQPQSGNRCCFHLSEVLRL 114
>gi|156403933|ref|XP_001640162.1| predicted protein [Nematostella vectensis]
gi|156227295|gb|EDO48099.1| predicted protein [Nematostella vectensis]
Length = 564
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C YD PK LPC HT+CL CL + + ++CPI +++ +P GG
Sbjct: 20 LVCPICEEEYD----DPKRLPCMHTICLGCLESMVP---KNALIMKCPIDEQELPMPMGG 72
Query: 91 VAALPPSFLVNQLLDLMS-------RQRRHIIPKCSTHNSQ 124
+ ALP + +LL++ S ++RR + K +N +
Sbjct: 73 INALPSDLRIVRLLEVASGGQTKSKKKRRSLSAKSLENNEK 113
>gi|301607377|ref|XP_002933282.1| PREDICTED: tripartite motif-containing protein 59-like [Xenopus
(Silurana) tropicalis]
Length = 397
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRETGTLR 76
N+ED LTC C ++D P++LPCSHT C +CL ++ S L+
Sbjct: 3 NFEDE----LTCSVCYNIFDD----PRILPCSHTFCRNCLEKVIHSSGSGLWRTSAAWLK 54
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
CP CR + G ALP +F + +++ + C HN Q
Sbjct: 55 CPSCRNTSELTMSGTLALPINFALKSIVEKYKSENHFKAATCPEHNKQ 102
>gi|291234992|ref|XP_002737430.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 680
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Query: 1 MTLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC 60
M ++ S + ++ L E NE FL C CL Y PK+LPC HT C C
Sbjct: 1 MAVAASEVIDDDAVLAE--------INEDFLCCAICLERYSA----PKILPCQHTFCKKC 48
Query: 61 LSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
L ++A + T CP C + IP + L +F ++ LLD + + P+
Sbjct: 49 LVQLA--KKVAPNTFMCPTCNRSVKIP---INDLQSNFFMSSLLDKIPEKLDAATPR 100
>gi|260824806|ref|XP_002607358.1| hypothetical protein BRAFLDRAFT_69764 [Branchiostoma floridae]
gi|229292705|gb|EEN63368.1| hypothetical protein BRAFLDRAFT_69764 [Branchiostoma floridae]
Length = 1436
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 31/129 (24%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---------------- 69
F+E LTC CL ++ PK+LPC HT C CL +A+ +
Sbjct: 782 FHEE-LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASKRMPLIQGLASSRVSLLQG 836
Query: 70 -RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLM---------SRQRRHIIPKCS 119
L+CP CR+Q+ +P GV LP + LV L + + ++++ +CS
Sbjct: 837 LARRVPLQCPNCRQQVRLPPQGVTGLPDNHLVTSLCERLQNQATLSGETKEQPQSGNRCS 896
Query: 120 THNSQIKKL 128
H S+ KL
Sbjct: 897 LHPSEEVKL 905
>gi|47218749|emb|CAG02735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 89
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
C C C YD TPKLL C HT CL CL+RI + E TL CPICRE +P
Sbjct: 35 CAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSA-ELKTLSCPICREVTRLP 88
>gi|291242614|ref|XP_002741201.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 768
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC H+ C CL AA E LRCP C ++ + G
Sbjct: 12 LSCPLCLDRFN----DPKVLPCLHSFCRRCLDDRAA----EPDILRCPTCHHEVPLGDNG 63
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
+ +LP ++L+N +LD++ Q
Sbjct: 64 IDSLPSNYLLNNILDVVGTQ 83
>gi|260814125|ref|XP_002601766.1| hypothetical protein BRAFLDRAFT_76014 [Branchiostoma floridae]
gi|229287068|gb|EEN57778.1| hypothetical protein BRAFLDRAFT_76014 [Branchiostoma floridae]
Length = 257
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRETGTLRCPICR 81
E+ E FL C CL YD PK LPC+H C CL + +A + R L CP CR
Sbjct: 7 EEITERFLVCSVCLEEYD----EPKKLPCTHCFCRKCLENVLDSAKEGRRRTRLSCPSCR 62
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMS 108
++ +P GV L S + +L ++S
Sbjct: 63 QEARLPGRGVRDLEDSHFLRKLQKVVS 89
>gi|291222486|ref|XP_002731247.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 727
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ E FL+C CL Y PK+LPC HT C CL A + G L+C CR Q
Sbjct: 12 EEVTEDFLSCSICLENY----KNPKVLPCLHTFCQQCLESFKA---KSGGVLKCATCRIQ 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L + + LLD RQR+
Sbjct: 65 CDTP---IQKLKSNIFLTSLLDTFQRQRQ 90
>gi|443720821|gb|ELU10406.1| hypothetical protein CAPTEDRAFT_146794, partial [Capitella teleta]
gi|443730823|gb|ELU16175.1| hypothetical protein CAPTEDRAFT_97658, partial [Capitella teleta]
Length = 216
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
+++ E+ N+ LTC C+ + G+ PKLLPC H+ C CL ++A S + + CP
Sbjct: 9 ALSAENLND-LLTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMARSHS----FVDCPT 63
Query: 80 CREQITIP---RGGVAALPPSFLVNQLLD-LMSRQRRHIIPKCSTHNS 123
CRE+ +P G+ L +F V Q+ + L+ RR C H++
Sbjct: 64 CRERTPLPCPAPAGIHRLQTNFYVTQMQEILIDDSRRVDRSSCRKHSN 111
>gi|405969111|gb|EKC34117.1| hypothetical protein CGI_10014955 [Crassostrea gigas]
Length = 1363
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGTLRCPICREQITIPRG 89
++C C + + PKLLPC HT+C C+ I AS T++CPICR+ IP+
Sbjct: 864 ISCPICAYQFSTPDKVPKLLPCYHTICSPCIDSIIASTPLNSDSTIKCPICRQGANIPKN 923
Query: 90 GVAALPPSFL 99
GV +F
Sbjct: 924 GVEGFFDNFF 933
>gi|291240196|ref|XP_002740006.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 728
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y PK LPC HT C CL + + G LRC CR Q
Sbjct: 10 DEIGEDFLSCSICLEIY----KKPKALPCLHTFCEQCL---VTCKAKSEGVLRCAACRIQ 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD RQ++
Sbjct: 63 CDTP---IKDLKSNFFLTSLLDTFQRQKQ 88
>gi|334328733|ref|XP_003341114.1| PREDICTED: RING finger protein 183-like [Monodelphis domestica]
Length = 246
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNE---SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH 59
LS + + S + + ED +E S L C C YD TPK+L C+H CL
Sbjct: 17 LSSPTAVVPMSPVSPPAPGSPEDGSEKVSSPLECSICFTGYDNIFKTPKVLSCTHVFCLE 76
Query: 60 CLSRIAASQT--RETGTLRCPICREQITIPRGGVAAL 94
CL+R+ A+Q + ++ CP+CR+ +P G AL
Sbjct: 77 CLARLMAAQPAGQSDDSVPCPLCRQPTPVPLAGAPAL 113
>gi|291242104|ref|XP_002740948.1| PREDICTED: MGC82029 protein-like [Saccoglossus kowalevskii]
Length = 345
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
+ T S + FLTC C Y PKLL C H+ C CL R S +
Sbjct: 1 MASTASALANQLRDEFLTCSLCFSSY----KNPKLLSCQHSFCRECLDRWIVSS--KVKL 54
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLM 107
L CP+CR++ IP G S L+ LL+ +
Sbjct: 55 LACPVCRKESVIPVNGAIGFSASILITNLLEYL 87
>gi|260817090|ref|XP_002603420.1| hypothetical protein BRAFLDRAFT_222555 [Branchiostoma floridae]
gi|229288739|gb|EEN59431.1| hypothetical protein BRAFLDRAFT_222555 [Branchiostoma floridae]
Length = 86
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL + Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLEELLKKQKVKT-ELDCPTCRSKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLD 105
+P GGVA L +F V L D
Sbjct: 65 LPGGGVAGLKDNFFVESLKD 84
>gi|440586601|emb|CCK33022.1| NHL domain protein Brain Tumour [Platynereis dumerilii]
Length = 750
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 6 SSTLSTNSTLVETVSINYEDFNESFLT-CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
S TLST T+ T + + D S T C C Y PK+LPC HT C CL +I
Sbjct: 3 SPTLSTTDTMSLTSNSSEGDIENSLNTKCSLCNETYS----IPKVLPCFHTFCQPCLEKI 58
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
+ + L CP C ++ + G+AA PP F VN +L+
Sbjct: 59 IETPDK----LSCPECHQETFLTSAGIAAFPPDFAVNNVLE 95
>gi|291233705|ref|XP_002736792.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 694
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE FL C CL Y PK+LPC HT C CL ++A + TL CP C +
Sbjct: 17 EINEDFLCCAICLERYS----DPKILPCQHTFCKKCLVQLAEKGVAD--TLMCPTCNRSV 70
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
+P + L +F ++ LLD + + PK
Sbjct: 71 KVP---INDLQSNFFMSSLLDKIPEKLVAGTPK 100
>gi|260785672|ref|XP_002587884.1| hypothetical protein BRAFLDRAFT_87271 [Branchiostoma floridae]
gi|229273039|gb|EEN43895.1| hypothetical protein BRAFLDRAFT_87271 [Branchiostoma floridae]
Length = 171
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + + + + + Q
Sbjct: 68 VAGLPDNLMAANMCERLQNQ 87
>gi|321471277|gb|EFX82250.1| hypothetical protein DAPPUDRAFT_316926 [Daphnia pulex]
Length = 365
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
D + F+TCG C Y PK LPCSHT+CL CL I E G++ CP CR
Sbjct: 9 DAGDDFVTCGVCFNEYHEETKKPKSLPCSHTICLSCLREIF-----EDGSISCPFCR 60
>gi|291243275|ref|XP_002741528.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 745
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE FL C CL Y PK+LPC HT C CL ++A + TL CP C +
Sbjct: 17 EINEDFLCCAICLERYS----DPKILPCQHTFCKKCLVQLAEKGVAD--TLMCPTCNRSV 70
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
+P + L +F ++ LLD + + PK
Sbjct: 71 KVP---INDLQSNFFMSSLLDKIPEKLVAGTPK 100
>gi|260817096|ref|XP_002603423.1| hypothetical protein BRAFLDRAFT_222673 [Branchiostoma floridae]
gi|229288742|gb|EEN59434.1| hypothetical protein BRAFLDRAFT_222673 [Branchiostoma floridae]
Length = 86
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL + Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLKELLKKQKVKT-ELDCPTCRRKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLD 105
+P GGVA L +F V L D
Sbjct: 65 LPGGGVAELKDNFFVESLKD 84
>gi|260834556|ref|XP_002612276.1| hypothetical protein BRAFLDRAFT_104889 [Branchiostoma floridae]
gi|229297652|gb|EEN68285.1| hypothetical protein BRAFLDRAFT_104889 [Branchiostoma floridae]
Length = 733
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTCG C ++ PK+LPC HT C CL GT CP C+ ++++P G
Sbjct: 16 LTCGMCKNLFT----QPKVLPCQHTFCQDCLKHHVGG----GGTFPCPECQREVSVPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR 112
VA LP + LV L + Q++
Sbjct: 68 VANLPDNNLVASLCQHVRNQQQ 89
>gi|224080039|ref|XP_002187930.1| PREDICTED: RING finger protein 223 [Taeniopygia guttata]
Length = 328
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
S + C C YD TPKLL CSH CL C++R++A+ L CP CR+ +PR
Sbjct: 88 SPVECSICFTSYDNSFKTPKLLQCSHVFCLECVARLSAALAAGQEALPCPFCRQPTCLPR 147
Query: 89 GGVAAL 94
G L
Sbjct: 148 QGAPGL 153
>gi|291242383|ref|XP_002741087.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 662
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
ST + S + +E LTC CL Y PK+LPC H+ C CL+++ +Q
Sbjct: 6 STSIPKYSFLGDKIDEDLLTCPVCLKRY----KNPKILPCHHSFCEQCLAQLKGTQD--- 58
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
T+ CP CR+ ++ + L PS ++N ++D++ Q R
Sbjct: 59 -TIECPNCRQCHSVST--IQYLRPSTIINSVIDIIEEQER 95
>gi|405969109|gb|EKC34115.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 513
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGTLRCPICREQITIPRGGV 91
C C + E PKLLPC HT C CL IA++ T RCPICR+ +IP+ GV
Sbjct: 9 CPICTHEFSTPEKVPKLLPCYHTFCSPCLDNMIASTPLNSDSTFRCPICRQGASIPKNGV 68
Query: 92 AALPPSFL 99
++
Sbjct: 69 QGFFDNYF 76
>gi|441671671|ref|XP_004092289.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 223 [Nomascus
leucogenys]
Length = 178
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+ T
Sbjct: 46 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTT 105
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 106 VPPAGAPAL 114
>gi|260835099|ref|XP_002612547.1| hypothetical protein BRAFLDRAFT_75330 [Branchiostoma floridae]
gi|229297924|gb|EEN68556.1| hypothetical protein BRAFLDRAFT_75330 [Branchiostoma floridae]
Length = 332
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E E L CG C + PK LPC HT C CL+++A S + CPICR +
Sbjct: 6 EKILEEGLCCGICHETF----RRPKSLPCGHTFCEECLTKLATS----FRDICCPICRRE 57
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--QRRHIIPKCSTHNSQ 124
+ +P GVA LP + + ++ S + II +C H S+
Sbjct: 58 VPLPTDGVAGLPTDYRLAEMSKKFSEVTVEQDIIQRCEYHPSE 100
>gi|443687940|gb|ELT90768.1| hypothetical protein CAPTEDRAFT_49606, partial [Capitella teleta]
Length = 159
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
+++ E+ N+ LTC C+ + G+ PKLLPC H+ C CL ++A R + CP
Sbjct: 2 ALSAENLND-LLTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMA----RSHSFVDCPT 56
Query: 80 CREQITIP---RGGVAALPPSFLVNQLLDLMSRQRRHI 114
CRE+ +P G+ L +F V Q+ +++ R +
Sbjct: 57 CRERTPLPCPAPAGIHRLQTNFYVTQMQEILIDDSRRV 94
>gi|321471401|gb|EFX82374.1| hypothetical protein DAPPUDRAFT_302629 [Daphnia pulex]
Length = 578
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE +TCG CLC +D PK LPCSHT+CL CL I + CP CR
Sbjct: 12 ELNE-LVTCGVCLCEFDTDNRKPKFLPCSHTICLSCLKEI-----NRNYMVACPFCRNIS 65
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHII 115
T + VA L + Q+L L +++ I
Sbjct: 66 T--QIHVANLANNSYALQMLKLKEKKQESTI 94
>gi|291225545|ref|XP_002732762.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 731
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL + TPK+LPC H+ C HCL + +G L CPICR + +P
Sbjct: 14 EEMLTCSLCLEPF----RTPKVLPCLHSFCQHCLE---LWMKKNSGKLTCPICRRE--MP 64
Query: 88 RGGVAALPPSFLVNQLLDLMS 108
V+AL +FL+ +L MS
Sbjct: 65 DNDVSALQTNFLLTELSGYMS 85
>gi|291244525|ref|XP_002742146.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 1 MTLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC 60
M + S L T L E E FL C CL Y PK+LPC HT C C
Sbjct: 1 MAAAASDVLITEDILTE--------IREEFLYCAICLERYS----EPKILPCHHTFCKKC 48
Query: 61 LSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP 116
L ++ Q + L CP C + I P ++ L +F +N LLD +S + + P
Sbjct: 49 LVQLTEKQAQM--LLICPTCSKPIKEP---ISNLQSNFFMNSLLDKVSSKVETVTP 99
>gi|260785676|ref|XP_002587886.1| hypothetical protein BRAFLDRAFT_87273 [Branchiostoma floridae]
gi|229273041|gb|EEN43897.1| hypothetical protein BRAFLDRAFT_87273 [Branchiostoma floridae]
Length = 392
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
LTC CL ++ PK+LPC HT C CL +A L+C +CR+Q+ +P
Sbjct: 16 LTCSICLELFT----RPKMLPCQHTFCQSPCLENLAVRGR----ALKCAVCRQQVRLPPQ 67
Query: 90 GVAALPPSFLVNQLLDLMSR 109
GV LP + + +L+ + +
Sbjct: 68 GVTGLPDNLMAGNMLERLQQ 87
>gi|334085187|ref|NP_001207428.1| RING finger protein 223 [Mus musculus]
Length = 255
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L CSH CL CL+R+AA+Q RE + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCSHVFCLECLARLAAAQPAGRSGRE--AVPCPFCRQP 104
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 105 TTVPVAGAPAL 115
>gi|291221736|ref|XP_002730877.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 723
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL+C CL + PK+LPC HT C CL A + G L+C CR Q
Sbjct: 11 EIGEDFLSCSICLEFFK----NPKVLPCLHTFCEQCLVTFKA---KSEGVLKCATCRIQC 63
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD R+R+
Sbjct: 64 DTP---IQELKSNFFLTSLLDTFQRRRQ 88
>gi|260820489|ref|XP_002605567.1| hypothetical protein BRAFLDRAFT_228012 [Branchiostoma floridae]
gi|229290901|gb|EEN61577.1| hypothetical protein BRAFLDRAFT_228012 [Branchiostoma floridae]
Length = 90
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL + PK+LPC HT C CL + A++ G CP CR + +
Sbjct: 15 DFLECAICLEPF----KDPKILPCLHTFCKGCLEKFFANEGDLKGKFPCPTCRTETALLE 70
Query: 89 GGVAALPPSFLVNQLLD 105
GG+A L +F V L D
Sbjct: 71 GGLAGLKDNFFVLSLRD 87
>gi|126338434|ref|XP_001370427.1| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 420
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRETGTLR----CPICR 81
E LTC C +++ P++LPCSHT C +CL + A+ LR CP CR
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYVRRALRIPLTCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ IP G+ +LP +F + +++ ++ + C H+SQ
Sbjct: 61 RTVEIPPPGIESLPINFALRAIIEKYEQEEHSDVITCPEHSSQ 103
>gi|291229458|ref|XP_002734690.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 722
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ +E FL+C CL Y P LLPC HT C CL A + G L+C CR Q
Sbjct: 10 KEISEDFLSCAICLENYK----NPTLLPCLHTFCQQCLVTFKA---KSGGVLKCATCRMQ 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD RQ +
Sbjct: 63 CDTP---IQELKSNFFLTSLLDAFQRQSQ 88
>gi|440898577|gb|ELR50042.1| Intraflagellar transport protein 80-like protein [Bos grunniens
mutus]
Length = 948
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFE----DPRVLPCSHTFCRNCLENV----LQATGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQ 103
>gi|260808706|ref|XP_002599148.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
gi|229284424|gb|EEN55160.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
Length = 610
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL ++A + TL CP CR Q+ +P G
Sbjct: 16 LSCIICLELF----TRPKVLPCQHTFCQECLQQLAGKKK----TLECPTCRLQVRLPSKG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V LP S +V + + + Q
Sbjct: 68 VIGLPASCIVANMCERLKNQ 87
>gi|260828347|ref|XP_002609125.1| hypothetical protein BRAFLDRAFT_91103 [Branchiostoma floridae]
gi|229294479|gb|EEN65135.1| hypothetical protein BRAFLDRAFT_91103 [Branchiostoma floridae]
Length = 690
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S + D ++FL C C +Y PKLLPC HT C CL R A+ + + CP+
Sbjct: 11 SFHVWDTKDNFLVCKLCSEIY----CNPKLLPCLHTFCEDCLERFASV---DVDIVECPV 63
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMS 108
CR TIP GVA + V L +S
Sbjct: 64 CRVNHTIPDLGVAGFEDNGFVASLCKTLS 92
>gi|354495775|ref|XP_003510004.1| PREDICTED: RING finger protein 223-like [Cricetulus griseus]
gi|344251666|gb|EGW07770.1| RING finger protein 183 [Cricetulus griseus]
Length = 255
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L C+H CL CL+R+AA+Q RE + CP CR+
Sbjct: 47 SPLECSICFSGYDNVFKTPKELSCTHVFCLECLARLAAAQPAGRPGRE--AVPCPFCRQP 104
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 105 TTVPAAGAPAL 115
>gi|71896955|ref|NP_001026491.1| tripartite motif-containing protein 59 [Gallus gallus]
gi|82197903|sp|Q5ZMD4.1|TRI59_CHICK RecName: Full=Tripartite motif-containing protein 59
gi|53127452|emb|CAG31109.1| hypothetical protein RCJMB04_2h17 [Gallus gallus]
Length = 408
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET------GTLRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFE----DPRVLPCSHTFCRSCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ IP G +LP +F + +++ ++ + CS H Q
Sbjct: 61 SIVEIPASGTESLPINFALKAIIEKYRQEDHSDVATCSEHYRQ 103
>gi|156402654|ref|XP_001639705.1| predicted protein [Nematostella vectensis]
gi|156226835|gb|EDO47642.1| predicted protein [Nematostella vectensis]
Length = 711
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR---IAASQTRETGTLR 76
++ E ++ L C C ++ PK+L C HT C CL + A T ++
Sbjct: 3 TVRDEGYSPQSLNCRACHKVFT----EPKILDCLHTFCQKCLGTHDILGAG----TNSIV 54
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMS-RQRRHIIPKCS 119
CP+CR+ IP GV +LP +FL+N LD +S + + I C+
Sbjct: 55 CPLCRKPTPIPESGVESLPSNFLLNNALDQLSVKSSKEYILHCT 98
>gi|405978569|gb|EKC42949.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 637
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCL-SRIAASQTRETGTLRCPICREQITIPRGGV 91
CG CL G PK+LPC HT CL CL S + + RET T CP+C + IPRGGV
Sbjct: 18 CGICL----GDFKKPKILPCFHTFCLDCLRSYVGKTGRRETFT--CPLCLVETEIPRGGV 71
Query: 92 AALPPSFLV 100
+F +
Sbjct: 72 EHFQTNFYI 80
>gi|443693141|gb|ELT94572.1| hypothetical protein CAPTEDRAFT_144792, partial [Capitella teleta]
Length = 97
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC-----LSRIAASQTRETGTLRCP 78
++ ++ FL C CL Y +PK L C HT C C LS + + CP
Sbjct: 11 QEIHDEFLVCKICLEAYK----SPKSLNCLHTFCEQCIENHILSESTYKKYTDYREFTCP 66
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSR 109
+CR++ +P GGV LP +FLV+ L +++ R
Sbjct: 67 LCRKRTQLPIGGVKKLPDNFLVSSLSEIVQR 97
>gi|261289857|ref|XP_002611791.1| hypothetical protein BRAFLDRAFT_236413 [Branchiostoma floridae]
gi|229297162|gb|EEN67800.1| hypothetical protein BRAFLDRAFT_236413 [Branchiostoma floridae]
Length = 88
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL + PK+LPC HT C CL + Q G CP CR + +P
Sbjct: 15 DFLECTICLEPFK----EPKILPCLHTFCKGCLEKFVGKQGE--GKFPCPTCRTETVLPA 68
Query: 89 GGVAALPPSFLVNQLLD 105
GGVA L +F V L D
Sbjct: 69 GGVAGLKNNFFVLSLRD 85
>gi|260830067|ref|XP_002609983.1| hypothetical protein BRAFLDRAFT_85950 [Branchiostoma floridae]
gi|229295345|gb|EEN65993.1| hypothetical protein BRAFLDRAFT_85950 [Branchiostoma floridae]
Length = 499
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C C Y PK+L C HT CL CL + Q E + CP CR +
Sbjct: 10 ISDDFLECKVCYEPYK----IPKVLACLHTFCLECLEQSVEKQG-ERNRVFCPTCRTPTS 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P GGV L +F V L D + R+
Sbjct: 65 LPEGGVTKLKDNFFVESLRDTVDIYRK 91
>gi|260830144|ref|XP_002610021.1| hypothetical protein BRAFLDRAFT_99973 [Branchiostoma floridae]
gi|229295384|gb|EEN66031.1| hypothetical protein BRAFLDRAFT_99973 [Branchiostoma floridae]
Length = 614
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL R CP CR Q+T+P G
Sbjct: 16 LSCSICLDLFS----RPKVLPCMHTFCQDCL----GDHARARQPFECPNCRLQVTLPTQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V LP + LV L + +S+Q
Sbjct: 68 VPGLPDNHLVANLCERISKQ 87
>gi|341902414|gb|EGT58349.1| hypothetical protein CAEBREN_14761 [Caenorhabditis brenneri]
Length = 152
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 31 LTCGTCLCMYDG--GEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
L C CL Y +P++L C HTVC C+ + ASQ +RCP C+++ +P
Sbjct: 66 LKCNVCLLKYSATSKNRSPRILTNCGHTVCFGCIKNLTASQK----VVRCPFCKKRTNLP 121
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHI 114
G V L ++ + L++ M+R++ I
Sbjct: 122 NGAVNKLRKNYAIIGLVEEMNREKNEI 148
>gi|297279158|ref|XP_002801685.1| PREDICTED: hypothetical protein LOC100428459 [Macaca mulatta]
Length = 249
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 TLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCL 61
T SM + S+ + + E S L C C YD TPK L C+H CL CL
Sbjct: 21 TASMPRSPSSAGSPRSPGTPGSEKV-ASPLECSICFSGYDNIFKTPKELSCTHVFCLECL 79
Query: 62 SRIAASQT--RETG-TLRCPICREQITIPRGGVAAL 94
+R+AA+Q R G + CP CR+ T+P G AL
Sbjct: 80 ARLAAAQPVGRPGGEAVPCPFCRQPTTVPPAGAPAL 115
>gi|260836014|ref|XP_002613002.1| hypothetical protein BRAFLDRAFT_74791 [Branchiostoma floridae]
gi|229298384|gb|EEN69011.1| hypothetical protein BRAFLDRAFT_74791 [Branchiostoma floridae]
Length = 182
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLP-CSHTVCLHCLSRIAASQTRETG-----TLRCPICR 81
+ LTCG CL +D PK LP C H C+ CL++ A++ R G T CP CR
Sbjct: 14 DDLLTCGICLETFDSKLKKPKSLPSCRHIFCMECLTKHVATEQRRRGQGGWTTFECPTCR 73
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
+++ + GV LP V L D
Sbjct: 74 KKVNLSPKGVEGLPDDRTVLGLTD 97
>gi|345321215|ref|XP_001516503.2| PREDICTED: RING finger protein 223-like [Ornithorhynchus anatinus]
Length = 240
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRETGTLRCPICREQITI 86
S L C C YD TPKLL CSH CL C++R+ A+ T+ CP CR+ +
Sbjct: 43 SPLECSICFTGYDNVFKTPKLLACSHAFCLECVARLVAALPDALAEPTVPCPFCRQPTAV 102
Query: 87 PRGGVAALP 95
P G ALP
Sbjct: 103 PLAGAPALP 111
>gi|327266926|ref|XP_003218254.1| PREDICTED: tripartite motif-containing protein 59-like [Anolis
carolinensis]
Length = 406
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCL-SRIAASQTRETGT-----LRCPICR 81
E LTC C ++D P++LPCSHT C +CL S + S T L+CP CR
Sbjct: 5 EEELTCSICYSIFDD----PRVLPCSHTFCRNCLESVLQLSSTFSIWRPLRLPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ IP G +LP ++ + +++ R+ + C+ H Q
Sbjct: 61 SIVEIPPSGTDSLPVNYALKAIIEKYQREDHPDVATCNEHYRQ 103
>gi|260794800|ref|XP_002592395.1| hypothetical protein BRAFLDRAFT_67260 [Branchiostoma floridae]
gi|229277614|gb|EEN48406.1| hypothetical protein BRAFLDRAFT_67260 [Branchiostoma floridae]
Length = 602
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F E LTC CL ++ PK+LPC H C CL A+ + +CP CR+Q+
Sbjct: 12 FGEE-LTCSICLELFT----RPKVLPCQHIFCQDCLQDHASRRV----LFQCPNCRQQVR 62
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQ 110
IP GVA LP S +V L + + Q
Sbjct: 63 IPPQGVAGLPDSHIVANLCERLQAQ 87
>gi|345800570|ref|XP_546722.3| PREDICTED: RING finger protein 223 [Canis lupus familiaris]
Length = 231
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
+S S S + + S + S L C C YD TPK L C+H CL CL+
Sbjct: 1 MSAPSRTSPTAPAPRSPSTPGSEKVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLA 60
Query: 63 RIAASQT--RETG-TLRCPICREQITIPRGGVAAL 94
R+AA+Q R G + CP CR+ +P G AL
Sbjct: 61 RLAAAQPTGRPGGEAVPCPFCRQPTAVPAAGAPAL 95
>gi|260816139|ref|XP_002602829.1| hypothetical protein BRAFLDRAFT_236493 [Branchiostoma floridae]
gi|229288142|gb|EEN58841.1| hypothetical protein BRAFLDRAFT_236493 [Branchiostoma floridae]
Length = 192
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
++CG CL + PK+LPC HT C CL A G LRCP CR + I +GG
Sbjct: 1 MSCGICLQPF----KLPKILPCGHTFCEECLVEAA------RGGLRCPTCRNVVPI-KGG 49
Query: 91 VAALPPSFLVNQL 103
VAALP ++ V ++
Sbjct: 50 VAALPNNYQVAEM 62
>gi|260794808|ref|XP_002592399.1| hypothetical protein BRAFLDRAFT_67264 [Branchiostoma floridae]
gi|229277618|gb|EEN48410.1| hypothetical protein BRAFLDRAFT_67264 [Branchiostoma floridae]
Length = 912
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A+ + +CP CR+Q +P G
Sbjct: 16 LTCSICLELFT----KPKVLPCGHTFCQDCLQDHASRRV----PFQCPNCRQQFRLPLQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP S +V L + + Q
Sbjct: 68 VAGLPDSHIVANLCERLQTQ 87
>gi|443708151|gb|ELU03406.1| hypothetical protein CAPTEDRAFT_168454 [Capitella teleta]
Length = 738
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL+C CL Y PK+LPC HT C CL Q+ ++ CPICR+Q +P
Sbjct: 15 FLSCAICLERYS----RPKVLPCLHTFCEQCLQEYIPPQSL---SVACPICRQQSILPEA 67
Query: 90 GVAALPPSFLVNQLLDLM 107
GV+AL + + +L++++
Sbjct: 68 GVSALQNNCFIIKLMEVL 85
>gi|260808480|ref|XP_002599035.1| hypothetical protein BRAFLDRAFT_104269 [Branchiostoma floridae]
gi|229284311|gb|EEN55047.1| hypothetical protein BRAFLDRAFT_104269 [Branchiostoma floridae]
Length = 637
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+L C HT C CL ++ Q + L CP CR + +
Sbjct: 14 SDDFLECQICLESY----RRPKVLSCLHTFCQECLEQLHKRQG-DAQHLECPTCRTKTEL 68
Query: 87 PRGGVAALPPSFLVNQLLD 105
P GV AL +F V L D
Sbjct: 69 PGSGVTALKDNFFVESLAD 87
>gi|426240445|ref|XP_004014111.1| PREDICTED: RING finger protein 223 [Ovis aries]
Length = 242
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGT--LRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q T + G+ + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGQPGSEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPAAGAPAL 115
>gi|402852573|ref|XP_003890992.1| PREDICTED: RING finger protein 223 [Papio anubis]
Length = 248
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 TLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCL 61
T SM + S+ + + E S L C C YD TPK L C+H CL CL
Sbjct: 20 TASMPRSPSSAGSPRSPGTPGSEKV-ASPLECSICFSGYDNIFKTPKELSCTHIFCLECL 78
Query: 62 SRIAASQT--RETG-TLRCPICREQITIPRGGVAAL 94
+R+AA+Q R G + CP CR+ T+P G AL
Sbjct: 79 ARLAAAQPVGRPGGEAVPCPFCRQPTTVPPAGAPAL 114
>gi|260822789|ref|XP_002606784.1| hypothetical protein BRAFLDRAFT_82426 [Branchiostoma floridae]
gi|229292128|gb|EEN62794.1| hypothetical protein BRAFLDRAFT_82426 [Branchiostoma floridae]
Length = 631
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA--------SQTRETGTLRCPI 79
E FL+CG C + PK LPC H+ CL CL + R+ RC
Sbjct: 15 EDFLSCGICFEPFT----KPKALPCQHSFCLRCLESQHKQWLQDCRRTSHRQQQPFRCST 70
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
CRE +++P GV LP + LV L + S++
Sbjct: 71 CREPVSVPSTGVKGLPDNHLVANLCEEFSKK 101
>gi|390355820|ref|XP_003728633.1| PREDICTED: uncharacterized protein LOC585395 [Strongylocentrotus
purpuratus]
Length = 619
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PKLL CSHT C CL R++ +Q T L CPIC++ +P+G
Sbjct: 9 LECSICLKTIN----EPKLLTCSHTFCKACLERLSDAQVNRT-VLPCPICKKTSAVPKGE 63
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKC 118
V L + ++D M + +RH C
Sbjct: 64 VGNLQTYQALKSVVDDM-KNKRHNCTSC 90
>gi|350585496|ref|XP_003356161.2| PREDICTED: RING finger protein 223-like [Sus scrofa]
Length = 250
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 46 SPLECSICFSGYDNTFKTPKELSCTHVFCLECLARLAAAQPSGRPGGEAMPCPFCRQPTA 105
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 106 VPAAGAPAL 114
>gi|115497842|ref|NP_001070136.1| uncharacterized protein LOC767730 [Danio rerio]
gi|115313089|gb|AAI24314.1| Zgc:153310 [Danio rerio]
Length = 316
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
C C C +D TPKLL C HT CL CL+RI + + E TL CPICRE I G
Sbjct: 107 CIVCFCNFDNVFKTPKLLSCGHTFCLECLARINVN-SPEIKTLTCPICREVTEIRHG 162
>gi|405972294|gb|EKC37070.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 394
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS---RIAASQTRE-TGTLR 76
+ E F ++FL C C +D E PK+LPC HT CL CL R+ R T R
Sbjct: 73 FDEERFEDTFLKCLICRETFDEDEKMPKMLPCHHTFCLDCLKQMFRVEGEFRRNLTSAFR 132
Query: 77 ---------CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
CP CRE + + LP V +L+ + + + C H Q
Sbjct: 133 SMPVAVKISCPTCREGLIASEAEILRLPNDHTVRELVAFVRCTGKPDVAYCKKHQMQ 189
>gi|308498277|ref|XP_003111325.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
gi|308240873|gb|EFO84825.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
Length = 330
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT--------LRCPICREQ 83
TC CL YDG HTPK+L C+HTVC C++ + R T + CP+CR +
Sbjct: 18 TCQVCLEPYDGKRHTPKILQCAHTVCESCINVLEEQSRRRYNTGLDPTIVSISCPVCRTE 77
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHII 115
PR A + ++ + ++D M ++ H I
Sbjct: 78 TKTPR---ACIRTNYQLIDVVDGMCKEATHNI 106
>gi|291230680|ref|XP_002735294.1| PREDICTED: tripartite motif-containing 2-like [Saccoglossus
kowalevskii]
Length = 227
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E +E FLTC CL Y +H ++LPC HT C CL+ S ++ G L C +CR+
Sbjct: 10 ERIDEQFLTCTICLERY---KHA-RVLPCQHTFCEKCLT----SWVKQHGGLNCAVCRQP 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
+ LPPS L+N ++ L+ + + + S +KL
Sbjct: 62 WQAWASNIQQLPPSLLINGIVRLLEERDLKRVNRISVGKLVRRKL 106
>gi|260811658|ref|XP_002600539.1| hypothetical protein BRAFLDRAFT_150711 [Branchiostoma floridae]
gi|229285826|gb|EEN56551.1| hypothetical protein BRAFLDRAFT_150711 [Branchiostoma floridae]
Length = 171
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC C+ + P++LPC HT C CL A Q L CP CR Q+++P G
Sbjct: 1 MTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQVSLPDQG 52
Query: 91 VAALPPSFLVNQLLDLMS 108
V L +F VN LLD +
Sbjct: 53 VDGLRTNFYVNNLLDFAA 70
>gi|260827945|ref|XP_002608924.1| hypothetical protein BRAFLDRAFT_85511 [Branchiostoma floridae]
gi|229294278|gb|EEN64934.1| hypothetical protein BRAFLDRAFT_85511 [Branchiostoma floridae]
Length = 1459
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+E FL C C Y PKLLPC H C CL R A ++ + CP C ++ +
Sbjct: 817 SEDFLICQICFEEYS----KPKLLPCLHFFCERCLVRYVADRSHK---FECPTCGQETCL 869
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
GVA L +F ++ L D +S QR + K
Sbjct: 870 TERGVARLKDNFFISNLCDTLSMQRGRVKEK 900
>gi|291221599|ref|XP_002730807.1| PREDICTED: tripartite motif protein 2-like, partial [Saccoglossus
kowalevskii]
Length = 686
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
Y +E FL C C + PK+LPC H+ C CL R+ ++ T+ CP+CR
Sbjct: 10 YSQISEEFLLCQICFEAF----TKPKVLPCLHSFCEMCLMRVVPKGSQ---TIPCPMCRC 62
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ +P GVA L +F + L D + ++
Sbjct: 63 ETLLPENGVAGLKDNFFILNLSDAFTSRKE 92
>gi|74215829|dbj|BAE23442.1| unnamed protein product [Mus musculus]
Length = 285
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L CSH CL CL+R+AA+Q RE + CP CR+
Sbjct: 77 SPLECSICFSGYDNIFKTPKELSCSHVFCLECLARLAAAQPAGRSGRE--AVPCPFCRQP 134
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 135 TTVPVAGAPAL 145
>gi|338819345|sp|Q3UV31.2|RN223_MOUSE RecName: Full=RING finger protein 223
Length = 285
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L CSH CL CL+R+AA+Q RE + CP CR+
Sbjct: 77 SPLECSICFSGYDNIFKTPKELSCSHVFCLECLARLAAAQPAGRSGRE--AVPCPFCRQP 134
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 135 TTVPVAGAPAL 145
>gi|297484223|ref|XP_002694237.1| PREDICTED: RING finger protein 223 [Bos taurus]
gi|296479138|tpg|DAA21253.1| TPA: hypothetical protein BOS_16064 [Bos taurus]
Length = 249
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGT--LRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q T + G+ + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGQPGSEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPAAGAPAL 115
>gi|291230446|ref|XP_002735174.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 722
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRC 77
++ + NE LTC C Y PKLLPC H+ C CL T + G L C
Sbjct: 2 AAKLSVDRINEDLLTCPVCFERYK----QPKLLPCQHSFCEQCL----VEWTDKHGRLEC 53
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P CR Q + LPPS ++N ++ ++ Q R
Sbjct: 54 PNCR-QCHNTVSNIQQLPPSMVINAVISIVEEQER 87
>gi|440911737|gb|ELR61374.1| RING finger protein 183 [Bos grunniens mutus]
Length = 249
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGT--LRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q T + G+ + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGQPGSEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPAAGAPAL 115
>gi|397468748|ref|XP_003806033.1| PREDICTED: uncharacterized protein LOC100989971 [Pan paniscus]
Length = 600
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 522 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 581
Query: 86 IPRGGVAALPPSF 98
+P G AL S
Sbjct: 582 VPPAGAPALRTSL 594
>gi|260812333|ref|XP_002600875.1| hypothetical protein BRAFLDRAFT_75840 [Branchiostoma floridae]
gi|229286165|gb|EEN56887.1| hypothetical protein BRAFLDRAFT_75840 [Branchiostoma floridae]
Length = 527
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E ++ C C + PK+LPC HT C HCL Q + T+ CPICR+
Sbjct: 8 EKVSDDSTQCTICFYTFK----NPKVLPCLHTFCEHCLREWV--QKNDGDTIPCPICRQP 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+++P+ GV L +F + L+ ++ +
Sbjct: 62 VSLPQNGVEGLKDNFFIASLVKAVTEHNK 90
>gi|326926209|ref|XP_003209296.1| PREDICTED: tripartite motif-containing protein 59-like [Meleagris
gallopavo]
Length = 408
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRNCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ IP G +LP +F + +++ ++ + CS H Q
Sbjct: 61 TVVEIPASGTESLPTNFALKAIIEKYRQEDHSDVATCSEHYRQ 103
>gi|348551570|ref|XP_003461603.1| PREDICTED: RING finger protein 223-like [Cavia porcellus]
Length = 249
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE---TGTLRCPICR 81
D S L C C YD TPK L C+H CL CL+R+AA+Q T + CP CR
Sbjct: 39 DRVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTNLPGTEAVPCPFCR 98
Query: 82 EQITIPRGGVAAL 94
+ +P GV L
Sbjct: 99 QPTAVPAAGVPGL 111
>gi|60459910|gb|AAX20126.1| tripartite motif protein L-TRIM [Lymnaea stagnalis]
Length = 816
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ D N + L+C C Y PK+LPC HT C CLS + S E+ ++ CP+CR+
Sbjct: 13 FWDSNINLLSCAICDQRY----KDPKVLPCLHTFCELCLSNVIPS---ESLSVTCPVCRQ 65
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMS 108
Q +P GV+AL + V LL+ ++
Sbjct: 66 QSILPLDGVSALQTNGFVLNLLNAIT 91
>gi|308481362|ref|XP_003102886.1| hypothetical protein CRE_31256 [Caenorhabditis remanei]
gi|308260589|gb|EFP04542.1| hypothetical protein CRE_31256 [Caenorhabditis remanei]
Length = 175
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N D E C C+ MYDG PK L C HT C C+ RI + + LRC CR
Sbjct: 87 NDRDAREDTHCCALCIRMYDGQAVLPKTLSCGHTFCQECIDRITV-RLQWGSWLRCSTCR 145
Query: 82 EQITIPRGGVA---ALPPSFL 99
+I +P GG A+ P+++
Sbjct: 146 RRINMPAGGFQTTYAMVPAYI 166
>gi|291235532|ref|XP_002737698.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y P +LPC HT C CL A + G L+C CR Q
Sbjct: 14 DEIGEDFLSCSICLEIYK----KPTVLPCLHTYCQQCLVDFKA---KSGGVLKCARCRIQ 66
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD RQ++
Sbjct: 67 CDTP---IQELKSNFFLTSLLDTFQRQKQ 92
>gi|260806062|ref|XP_002597904.1| hypothetical protein BRAFLDRAFT_234182 [Branchiostoma floridae]
gi|229283173|gb|EEN53916.1| hypothetical protein BRAFLDRAFT_234182 [Branchiostoma floridae]
Length = 716
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
CG CL + + P+ LPC H C CL A + R L+CP+CRE++ +P GV+
Sbjct: 1 CGLCLQLAE----RPRALPCLHAFCEGCLREYAHGKRR----LKCPVCRERVKLPSEGVS 52
Query: 93 ALP 95
ALP
Sbjct: 53 ALP 55
>gi|308505564|ref|XP_003114965.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
gi|308259147|gb|EFP03100.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
Length = 452
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-QTRETG------TLRCPICREQIT 85
C C+ ++D HTPK+L C H+ C+ C+ R S Q TG C +CR ++
Sbjct: 25 CPICMEVFDTTSHTPKVLECGHSFCMSCIKRTVESIQVSHTGNGDVDMAFCCSLCRRSMS 84
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHII 115
IP GV+ P + +QL+D ++ Q ++
Sbjct: 85 IPSTGVSGFPTN---HQLIDAIAPQDSRVM 111
>gi|405954643|gb|EKC22027.1| Proto-oncogene tyrosine-protein kinase FYN [Crassostrea gigas]
Length = 689
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
L+M+ T S+ S+L E E FL+C CL + PK LPC H+ C HCL
Sbjct: 169 LTMARTPSSRSSL-------REKLQEEFLSCKICLESFI----KPKALPCLHSFCEHCLR 217
Query: 63 RIAASQTRET-GTLRCPICREQITIPRGGVAALPPSF 98
E G CP+CR+ IP G+ +F
Sbjct: 218 DYVRRHPGEKPGHFPCPMCRKDTKIPERGIGDFQDNF 254
>gi|392340794|ref|XP_003754170.1| PREDICTED: RING finger protein 223-like [Rattus norvegicus]
gi|392348585|ref|XP_003750143.1| PREDICTED: RING finger protein 223-like [Rattus norvegicus]
Length = 255
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L C+H CL CL+R+AA+Q RE + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPAGRPGRE--AVPCPFCRQP 104
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 105 TTVPAAGAPAL 115
>gi|291241688|ref|XP_002740745.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 728
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ + FLTC CL Y PK LPC HT C HCL +A + + +CP C
Sbjct: 12 DEITKDFLTCCICLEHY----QQPKALPCLHTFCEHCLISLADNTDLD---FKCPTCSTP 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHI 114
+ G+A L +F ++ LL M R+ + +
Sbjct: 65 CDLGEKGIAGLKGNFFISSLLHEMQRRAKRL 95
>gi|156370856|ref|XP_001628483.1| predicted protein [Nematostella vectensis]
gi|156215461|gb|EDO36420.1| predicted protein [Nematostella vectensis]
Length = 789
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 16 VETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL 75
+E +S +D + S +TC C +Y P++ PC HT C CL + AS+ + +
Sbjct: 1 MEPISEILKDVSWSRVTCALCKEIYT----DPRVTPCLHTFCRGCL-EVLASRNPYSSQI 55
Query: 76 RCPICREQITIPRG--GVAALPPSFLVNQLLDLMSRQ----RRHIIPKCSTHN 122
+CPIC ++ P G A PP+ V +LL++ S + R+ KC N
Sbjct: 56 QCPICEAEVNKPDGLDHFEAYPPNIYVGRLLEIYSAKFGVTRKDKCGKCDKIN 108
>gi|321471216|gb|EFX82189.1| hypothetical protein DAPPUDRAFT_302623 [Daphnia pulex]
Length = 667
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
ED E ++TC C +D + PKLL CSHTVCL CL +I ++CP+CR
Sbjct: 3 EDATEHYITCRVCYLQFDDHQVKPKLLSCSHTVCLTCLKQIY----NHGAVIKCPVCR 56
>gi|291223217|ref|XP_002731607.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 730
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
+ +S + + LTC CL + TPK+LPC HT C HCL TG
Sbjct: 1 MASNISAVKDQIRDDMLTCSLCLETF----KTPKVLPCLHTFCEHCLESWVE---ESTGK 53
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
L CP+CR +P + AL +F++ L D +S
Sbjct: 54 LTCPLCR--FEVPDNNIQALQTNFILVGLSDYIS 85
>gi|260811382|ref|XP_002600401.1| hypothetical protein BRAFLDRAFT_237372 [Branchiostoma floridae]
gi|229285688|gb|EEN56413.1| hypothetical protein BRAFLDRAFT_237372 [Branchiostoma floridae]
Length = 67
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q
Sbjct: 9 DDFDEQFLTCSICMRYF----QDPRVLPCLHTFCRECLKEWATKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGG 90
+++P G
Sbjct: 61 VSLPDQG 67
>gi|260791770|ref|XP_002590901.1| hypothetical protein BRAFLDRAFT_250581 [Branchiostoma floridae]
gi|229276099|gb|EEN46912.1| hypothetical protein BRAFLDRAFT_250581 [Branchiostoma floridae]
Length = 589
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---AASQTRETGTLRCPICREQI 84
E L+C CL M++ LLPC H +C HC I R G+ +CP CR+QI
Sbjct: 5 ERDLSCPVCLEMFN---KPVLLLPCQHNLCRHCAEDILTNMGGWARYGGSFKCPTCRDQI 61
Query: 85 TIPRGGVAALPPSFLVNQLLD 105
T+ R G+ L + LV +++
Sbjct: 62 TLGRQGLDGLKRNILVETIIE 82
>gi|149522674|ref|XP_001519418.1| PREDICTED: hypothetical protein LOC100090223, partial
[Ornithorhynchus anatinus]
Length = 151
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
S +C C+ YDG TPK L C H CL CLSR++ + LRCP+CR +P
Sbjct: 6 ASPASCLICVSPYDGLFRTPKRLACGHVFCLECLSRLSLASPAGAQVLRCPVCRRPTLLP 65
Query: 88 -RGGVAALP 95
R G ALP
Sbjct: 66 ARAGPPALP 74
>gi|260794814|ref|XP_002592402.1| hypothetical protein BRAFLDRAFT_67267 [Branchiostoma floridae]
gi|229277621|gb|EEN48413.1| hypothetical protein BRAFLDRAFT_67267 [Branchiostoma floridae]
Length = 639
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL + PK+LPC HT C CL A+ + +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELVT----RPKVLPCQHTFCQDCLQDHASRRV----PFQCPNCRQQVRLPPRG 67
Query: 91 VAALPPSFLVNQLLD-------LMSRQRRHIIPKCSTHNSQIKKL 128
VA LP S L L + L +R++ +CS H S+ +L
Sbjct: 68 VAGLPDSHLATSLCERLQNQATLSTREQSQYGNRCSFHPSEDVRL 112
>gi|194757852|ref|XP_001961176.1| GF11130 [Drosophila ananassae]
gi|190622474|gb|EDV37998.1| GF11130 [Drosophila ananassae]
Length = 1348
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|390361630|ref|XP_003729968.1| PREDICTED: uncharacterized protein LOC100889371 [Strongylocentrotus
purpuratus]
Length = 452
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
N+S L C CL +++ LL C HT C CL + ++ + +L CP+CR + +
Sbjct: 10 NDS-LVCPLCLDIFEKAT----LLACGHTFCKACLQNLDKTKRKNASSLVCPLCRRESAL 64
Query: 87 PRGGVAALPPSFLVNQLLD 105
RG V LPP+ VN L+D
Sbjct: 65 GRGRVDGLPPNITVNSLVD 83
>gi|321471398|gb|EFX82371.1| hypothetical protein DAPPUDRAFT_302631 [Daphnia pulex]
Length = 342
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
++N +E F+TC CL +D PK L CSHT+CL C R+ T+ CP
Sbjct: 3 NLNVNTLDEEFITCQICLYEFDEENKKPKFLQCSHTICLECF-----QAARQRDTITCPF 57
Query: 80 CR 81
CR
Sbjct: 58 CR 59
>gi|405965347|gb|EKC30728.1| RING finger protein nhl-1 [Crassostrea gigas]
Length = 1031
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
+ L C CL Y+ PKLLPC HT C CL + TR TL+CP CR + +
Sbjct: 13 DELLRCAICLDRYN----NPKLLPCQHTFCESPCLEGLVRGLTR---TLKCPECRAEHIV 65
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV++ P + + LDL
Sbjct: 66 PYRGVSSYPNNLTIQNFLDL 85
>gi|291231331|ref|XP_002735618.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 726
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 10 STNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT 69
++N +L++ V+ E FL+C CL +Y PK+LPC HT C CL +
Sbjct: 3 ASNKSLLDEVT-------EDFLSCSICLEIYK----NPKVLPCLHTYCQQCL---VTFKD 48
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ L+C CR Q P + + +F + LLD RQR+
Sbjct: 49 KSGVVLKCATCRIQCDTP---IEEMKSNFFLTSLLDTFQRQRQ 88
>gi|53127670|emb|CAG31164.1| hypothetical protein RCJMB04_2o16 [Gallus gallus]
Length = 238
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRSCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ IP G +LP +F + +++ ++ + CS H Q
Sbjct: 61 SIVEIPASGTESLPINFALKAIIEKYRQEDHSDVATCSEHYRQ 103
>gi|195384463|ref|XP_002050937.1| GJ19924 [Drosophila virilis]
gi|194145734|gb|EDW62130.1| GJ19924 [Drosophila virilis]
Length = 1346
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|195120698|ref|XP_002004858.1| GI19367 [Drosophila mojavensis]
gi|193909926|gb|EDW08793.1| GI19367 [Drosophila mojavensis]
Length = 1340
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|194881256|ref|XP_001974764.1| GG21942 [Drosophila erecta]
gi|190657951|gb|EDV55164.1| GG21942 [Drosophila erecta]
Length = 1353
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|348534771|ref|XP_003454875.1| PREDICTED: tripartite motif-containing protein 59-like [Oreochromis
niloticus]
Length = 429
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
D E LTC C C++ P++LPCSHT C CL + T + L+CP
Sbjct: 2 DNLEEDLTCSVCYCLFS----DPRVLPCSHTFCKTCLDNLLQVSTNYSIWRPLRLPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
CR + +P GV ALP + + +++ P C H+ Q
Sbjct: 58 NCRSVVELPPAGVDALPTNVSLRAIVEKYQMDSEPRPPSCPEHHRQ 103
>gi|156386715|ref|XP_001634057.1| predicted protein [Nematostella vectensis]
gi|156221135|gb|EDO41994.1| predicted protein [Nematostella vectensis]
Length = 549
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPK-LLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
F+E LTC CL PK L C+H VC CL R+ + +E +RCP CR
Sbjct: 11 FSEE-LTCPVCLEELK----EPKCLTSCAHNVCKPCLDRMTFNGEKE---IRCPTCRRST 62
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHI 114
IP GGV ALP + ++ +LL+ ++ I
Sbjct: 63 LIPDGGVKALPTNTILVRLLEATPGRKERI 92
>gi|260824846|ref|XP_002607378.1| hypothetical protein BRAFLDRAFT_69791 [Branchiostoma floridae]
gi|229292725|gb|EEN63388.1| hypothetical protein BRAFLDRAFT_69791 [Branchiostoma floridae]
Length = 651
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A + ++CP+CR+Q+ +P G
Sbjct: 16 LTCSICLDLFT----RPKVLPCQHTFCQECLQDHAEVRM----PIQCPVCRQQVRLPPQG 67
Query: 91 VAALPPSFLV--------NQL-LDLMSRQRRHIIPKCSTHNSQIKKL 128
V LP + + NQ+ L +R++ +CS H S+ KL
Sbjct: 68 VTGLPDNLMAANMCERLQNQVTLSGETREQPQSGNRCSLHPSEEVKL 114
>gi|260835270|ref|XP_002612632.1| hypothetical protein BRAFLDRAFT_78740 [Branchiostoma floridae]
gi|229298010|gb|EEN68641.1| hypothetical protein BRAFLDRAFT_78740 [Branchiostoma floridae]
Length = 639
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL + + +CP CR Q+++P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLRDLVGGRR----NFQCPNCRRQVSLPGPG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V LP + LV L + + Q
Sbjct: 68 VVGLPDNHLVTNLCEALQNQ 87
>gi|260808159|ref|XP_002598875.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
gi|229284150|gb|EEN54887.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
Length = 564
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF E LTC CL ++ PK+LPC HT C CL I + R +CP+C Q+
Sbjct: 11 DFREE-LTCSICLELFT----RPKVLPCMHTFCQDCLQGINVA--RREMPFKCPLCHRQV 63
Query: 85 TIPRGGVAALPPSFLVNQL 103
+P GV LP + L+ L
Sbjct: 64 KLPPQGVEGLPDNHLITTL 82
>gi|334182750|ref|NP_001185058.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
gi|332192012|gb|AEE30133.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
Length = 1805
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSYDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|22024206|ref|NP_611390.2| another B-box affiliate, isoform A [Drosophila melanogaster]
gi|24655386|ref|NP_725843.1| another B-box affiliate, isoform B [Drosophila melanogaster]
gi|21464288|gb|AAM51947.1| GH06739p [Drosophila melanogaster]
gi|21626957|gb|AAF57612.2| another B-box affiliate, isoform A [Drosophila melanogaster]
gi|21626958|gb|AAF57611.2| another B-box affiliate, isoform B [Drosophila melanogaster]
Length = 1353
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|291224495|ref|XP_002732239.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 777
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-LRCPICRE 82
E+ +E+FL CG C Y K+LPC H+ C HCL ++ +TG + CP+CR
Sbjct: 12 EEIDETFLNCGVCSERYSNA----KVLPCQHSFCEHCLVKLV----EKTGQPIHCPLCRR 63
Query: 83 QITIPRGGVAALPPSFLVNQL 103
+ I V+ LP ++ +N++
Sbjct: 64 KHYIK---VSDLPSNYFINEI 81
>gi|198457486|ref|XP_001360687.2| GA13495 [Drosophila pseudoobscura pseudoobscura]
gi|198135998|gb|EAL25262.2| GA13495 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|327412333|ref|NP_001192181.1| RING finger protein 223 [Homo sapiens]
gi|338819332|sp|E7ERA6.1|RN223_HUMAN RecName: Full=RING finger protein 223
Length = 249
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPPAGAPAL 115
>gi|195150695|ref|XP_002016286.1| GL11502 [Drosophila persimilis]
gi|194110133|gb|EDW32176.1| GL11502 [Drosophila persimilis]
Length = 1349
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|221330419|ref|NP_001137707.1| another B-box affiliate, isoform C [Drosophila melanogaster]
gi|220902287|gb|ACL83161.1| another B-box affiliate, isoform C [Drosophila melanogaster]
Length = 1517
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|195426818|ref|XP_002061491.1| GK20936 [Drosophila willistoni]
gi|194157576|gb|EDW72477.1| GK20936 [Drosophila willistoni]
Length = 1354
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|156401591|ref|XP_001639374.1| predicted protein [Nematostella vectensis]
gi|156226502|gb|EDO47311.1| predicted protein [Nematostella vectensis]
Length = 636
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL + PK+LPC HT C CL + S G L CP CR + ++
Sbjct: 20 LTCSVCLEQF----REPKMLPCFHTFCKECLEKTKQSF---RGNLLCPTCRTKTSVTEHE 72
Query: 91 -VAALPPSFLVNQLLDLMSRQ 110
+ LP +F+VN++LD + +
Sbjct: 73 MIQKLPNNFIVNRVLDALGAE 93
>gi|195487256|ref|XP_002091832.1| GE12016 [Drosophila yakuba]
gi|194177933|gb|EDW91544.1| GE12016 [Drosophila yakuba]
Length = 1354
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|297666751|ref|XP_002811672.1| PREDICTED: RING finger protein 223 [Pongo abelii]
Length = 252
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 50 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 109
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 110 VPPAGAPAL 118
>gi|195029981|ref|XP_001987850.1| GH22138 [Drosophila grimshawi]
gi|193903850|gb|EDW02717.1| GH22138 [Drosophila grimshawi]
Length = 1353
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|350405986|ref|XP_003487620.1| PREDICTED: hypothetical protein LOC100746052 [Bombus impatiens]
Length = 1795
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|194383676|dbj|BAG59196.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPPAGAPAL 115
>gi|291239557|ref|XP_002739689.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 744
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S+ E+ +ESFL C C Y K+LPC H+ C HCL+ +AA + + CP+
Sbjct: 7 SMVTEEIDESFLVCSFCSKWYSDA----KILPCLHSFCQHCLNELAAKNGGK--HIFCPV 60
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
C++ +P GG + VN+L+ L ++
Sbjct: 61 CKKGHDLP-GGTKGASNNHFVNELIALFKKK 90
>gi|260818777|ref|XP_002604559.1| hypothetical protein BRAFLDRAFT_79421 [Branchiostoma floridae]
gi|229289886|gb|EEN60570.1| hypothetical protein BRAFLDRAFT_79421 [Branchiostoma floridae]
Length = 1246
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F E L+C CL ++ PK+LPC HT C CL +A L+CP CR+ +
Sbjct: 477 FREE-LSCSICLELFT----RPKVLPCQHTFCQDCLQDLAGKNKH----LKCPNCRKHVW 527
Query: 86 IPRGGVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQIKKL 128
+ R GVA + LV L + + +R++ +CS H S++ K+
Sbjct: 528 LSRKGVAGFRDNHLVTSLCERLQNQATVSGETREQPQFGNRCSFHPSEVLKV 579
>gi|357622762|gb|EHJ74161.1| hypothetical protein KGM_17545 [Danaus plexippus]
Length = 1198
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
ES LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 ESLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV P + + + L+L ++
Sbjct: 58 PYQGVQGFPTNVTLQRFLELHAQ 80
>gi|260798148|ref|XP_002594062.1| hypothetical protein BRAFLDRAFT_68498 [Branchiostoma floridae]
gi|229279295|gb|EEN50073.1| hypothetical protein BRAFLDRAFT_68498 [Branchiostoma floridae]
Length = 515
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC C+ ++ PK+LPC HT C CL A + +CP CR+++ +P G
Sbjct: 16 LTCSICMELFT----RPKVLPCQHTFCQDCLRDHAEVR----APFQCPNCRQEVKLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
VA LP + + + +L Q + I+ + + SQ
Sbjct: 68 VAGLPDNKMAANMCEL-RLQNQAILSRETREQSQ 100
>gi|241997422|ref|XP_002433360.1| nhl repeat-containing protein, putative [Ixodes scapularis]
gi|215490783|gb|EEC00424.1| nhl repeat-containing protein, putative [Ixodes scapularis]
Length = 631
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 45 HTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLL 104
H PK+LPC H C CL + +T LRC CR ++ +P+ G++ P S + +L
Sbjct: 39 HRPKMLPCQHAFCFLCLQN--SVMKADTSKLRCAKCRTEVPLPKEGISGFPSSIHLQNIL 96
Query: 105 DLM 107
DL+
Sbjct: 97 DLL 99
>gi|156385196|ref|XP_001633517.1| predicted protein [Nematostella vectensis]
gi|156220588|gb|EDO41454.1| predicted protein [Nematostella vectensis]
Length = 76
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK L C H +C CL +AA ++ + +RCP+CR +I IPRGG
Sbjct: 8 LLCPICLDEF----KEPKTLSCMHDLCRKCLEDMAARES--SRVIRCPLCRSEIDIPRGG 61
Query: 91 VAALPPSFLVNQLLD 105
V LP + + +L++
Sbjct: 62 VKNLPTNLRLMKLVE 76
>gi|186478734|ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast protein transport factor
[Arabidopsis thaliana]
gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast transport factor protein
[Arabidopsis thaliana]
gi|110739333|dbj|BAF01579.1| hypothetical protein [Arabidopsis thaliana]
gi|332192014|gb|AEE30135.1| zinc ion binding protein [Arabidopsis thaliana]
Length = 811
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSYDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|291222677|ref|XP_002731342.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 618
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRC 77
S+ + +E FL C CL Y+ PK+LPC H+ C CL + R+ G L C
Sbjct: 2 AASLTIDKIDEQFLRCSVCLERYN----KPKVLPCQHSFCECCLIQWK----RQRGRLDC 53
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMS 108
P CR+ + L P+F++N ++++M
Sbjct: 54 PTCRDPTN---KTIEQLSPNFMINGVIEIME 81
>gi|321471409|gb|EFX82382.1| hypothetical protein DAPPUDRAFT_316826 [Daphnia pulex]
Length = 153
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
E +TC CL YD G PK L CSHT+CL C I R T+ CP CR
Sbjct: 10 EELVTCNICLNQYDEGIRKPKFLQCSHTICLECFQAI-----RNRYTIACPFCR 58
>gi|260832796|ref|XP_002611343.1| hypothetical protein BRAFLDRAFT_210928 [Branchiostoma floridae]
gi|229296714|gb|EEN67353.1| hypothetical protein BRAFLDRAFT_210928 [Branchiostoma floridae]
Length = 68
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 9 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLEKLLA--TEPVGKLDCPTCRQDV 62
Query: 85 TIPRGG 90
+PR G
Sbjct: 63 PLPRNG 68
>gi|443708903|gb|ELU03822.1| hypothetical protein CAPTEDRAFT_223323 [Capitella teleta]
Length = 886
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y P++LPC HT C CL + + R+ ++CP CR++ +
Sbjct: 33 ERLLTCAICLERY----TNPRILPCQHTFCRSPCLDGLVDLRNRK---VKCPECRKEHYV 85
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P G PP+ V LDL
Sbjct: 86 PPTGAGGFPPNITVANFLDL 105
>gi|260792760|ref|XP_002591382.1| hypothetical protein BRAFLDRAFT_86889 [Branchiostoma floridae]
gi|229276587|gb|EEN47393.1| hypothetical protein BRAFLDRAFT_86889 [Branchiostoma floridae]
Length = 888
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL ++ PK+LPC HT C CL A + L+CP CR+Q+ +P G
Sbjct: 16 LACSICLELFT----RPKVLPCQHTFCRDCLQDHAGKKKH----LKCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA L + LV L + + Q
Sbjct: 68 VAGLQDNHLVTSLCERLQNQ 87
>gi|321474665|gb|EFX85630.1| hypothetical protein DAPPUDRAFT_313859 [Daphnia pulex]
Length = 453
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D E FL CG C YD PKLL C H+ C+ CL + T T+ CP CR+
Sbjct: 8 DDEEDFLNCGICFEYYDSDIRVPKLLCCFHSCCIVCLK---GTMKEITSTITCPFCRQDT 64
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRH 113
+ G +L +F + ++ QR+
Sbjct: 65 KLTDGVKISLTTNFYIMPRIEKAIAQRKQ 93
>gi|390356333|ref|XP_003728759.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 500
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PKLL CSHT C CL R++ +Q T L CPIC++ +P+G
Sbjct: 9 LECSICLKTIN----EPKLLTCSHTFCKACLERLSDAQVNRT-VLPCPICKKTSAVPKGE 63
Query: 91 VAALPPSFLVNQLLDLMSRQR 111
V L + ++D M +R
Sbjct: 64 VGNLQTYQALKSVVDDMKNKR 84
>gi|340723937|ref|XP_003400343.1| PREDICTED: hypothetical protein LOC100643462 [Bombus terrestris]
Length = 1787
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|432910810|ref|XP_004078536.1| PREDICTED: RING finger protein 183-like [Oryzias latipes]
Length = 299
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
C C C YD TPK+L C HT CL CL+RI + E L CP+CRE
Sbjct: 97 CSICFCSYDNIFKTPKVLACGHTFCLECLARINVTSA-ELKNLPCPVCRE 145
>gi|260826069|ref|XP_002607988.1| hypothetical protein BRAFLDRAFT_191795 [Branchiostoma floridae]
gi|229293338|gb|EEN63998.1| hypothetical protein BRAFLDRAFT_191795 [Branchiostoma floridae]
Length = 70
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 11 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLERLLA--TEPVGKLDCPTCRQDV 64
Query: 85 TIPRGG 90
+P+ G
Sbjct: 65 PLPQNG 70
>gi|156360537|ref|XP_001625084.1| predicted protein [Nematostella vectensis]
gi|156211899|gb|EDO32984.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGKGKLVCPLCKSEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N +L ++
Sbjct: 65 PADVPSLKVNFMINSILSVL 84
>gi|308485130|ref|XP_003104764.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
gi|308257462|gb|EFP01415.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
Length = 1650
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-RETGTLRCPICREQITIPRG 89
+C C ++ G+ TPK+ PC HT CL C+ + +++ + T+ CP CR+ G
Sbjct: 896 FSCVICYDSFNTGKRTPKVFPCGHTFCLSCVKGLMTNRSFLSSSTVICPTCRQNTRFSTG 955
Query: 90 -GVAALPPSFLVNQLLDLMSRQRRHII 115
G +P +F V +L+ ++ ++
Sbjct: 956 LGAEKIPTNFSVLSMLEQRKEEKLAVL 982
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S++ + E +C C + PK+LPC H++C C++ + ++ L CP
Sbjct: 11 SVSPSEAAEEKPSCMVCYNDFHSKSRVPKILPCGHSLCQDCITTLLSNDGFMIRRLACPT 70
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
CR+ + G P +F L D++ +Q
Sbjct: 71 CRQTHSCSFGNSNTFPTNF---SLRDMLEKQ 98
>gi|390342768|ref|XP_003725733.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like
[Strongylocentrotus purpuratus]
Length = 379
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL + PK+L C HT C CL R+A + T+ CP CREQ +
Sbjct: 12 DFLECQICLDSF----RRPKVLQCLHTFCQDCLLRMAPTVQ---DTVVCPTCREQTPLHG 64
Query: 89 GGVAALPPSFLVNQLLDLMS 108
GVA L +F+++ LLDL++
Sbjct: 65 EGVADLKNNFVLSNLLDLVT 84
>gi|260808708|ref|XP_002599149.1| hypothetical protein BRAFLDRAFT_81816 [Branchiostoma floridae]
gi|229284425|gb|EEN55161.1| hypothetical protein BRAFLDRAFT_81816 [Branchiostoma floridae]
Length = 610
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PKLLPC HT C CL + + GT +C CR Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKLLPCQHTFCQDCLQELTGGE----GTFQCQNCRLQVELPSEG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR 112
V LP S ++ + + + Q +
Sbjct: 68 VTGLPDSCIMANMCERLHNQAK 89
>gi|125836979|ref|XP_001345555.1| PREDICTED: tripartite motif-containing protein 59-like [Danio
rerio]
Length = 344
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
D E LTC C ++ P++LPCSHT C CL + + L+CP
Sbjct: 2 DSLEEDLTCSVCYALFTD----PRVLPCSHTFCKSCLESVLQVSVNFSIWRPLRLPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
CR + +P G+ ALP + + +++ R+ R P C H Q
Sbjct: 58 NCRSVVELPTNGLDALPVNVCLRAIVEKYQRESRPRSPSCPEHPGQ 103
>gi|156360535|ref|XP_001625083.1| predicted protein [Nematostella vectensis]
gi|156211898|gb|EDO32983.1| predicted protein [Nematostella vectensis]
Length = 233
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N +L ++
Sbjct: 64 PADVPSLKVNFMINSILSVL 83
>gi|156352341|ref|XP_001622716.1| predicted protein [Nematostella vectensis]
gi|156209316|gb|EDO30616.1| predicted protein [Nematostella vectensis]
Length = 320
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V++L +F++N ++ ++
Sbjct: 65 PADVSSLKVNFMINSIISVL 84
>gi|307166849|gb|EFN60779.1| RING finger protein nhl-1 [Camponotus floridanus]
Length = 1303
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|390360925|ref|XP_003729801.1| PREDICTED: tripartite motif containing 13-like [Strongylocentrotus
purpuratus]
Length = 399
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S+ +E F ++ L C CL + PK+L CSHT C CL + S+ G L CP+
Sbjct: 25 SLKHEAFQKN-LECPVCLSFFK----EPKILTCSHTFCKGCLETLLESR----GKLLCPM 75
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
C E+ ++P G V L + +V L++ + Q
Sbjct: 76 CGEETSVPGGDVGRLQSNIIVRSLVEDVETQ 106
>gi|449445035|ref|XP_004140279.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Cucumis sativus]
Length = 1621
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
+C C +D +P LL C HT C HCLS+I A T +L CP CR TI V
Sbjct: 12 SCSICRIHFDEDSRSPLLLQCGHTFCKHCLSQIIAP-TSPKPSLTCPKCRHVSTIG-NSV 69
Query: 92 AALPPSFLV 100
+LP +F +
Sbjct: 70 LSLPKNFAI 78
>gi|5263316|gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 type and 4 WD40 PF|00400 (G
beta) domains [Arabidopsis thaliana]
Length = 860
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSYDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|449481166|ref|XP_004156101.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Cucumis sativus]
Length = 1638
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
+C C +D +P LL C HT C HCLS+I A T +L CP CR TI V
Sbjct: 12 SCSICRIHFDEDSRSPLLLQCGHTFCKHCLSQIIAP-TSPKPSLTCPKCRHVSTIG-NSV 69
Query: 92 AALPPSFLV 100
+LP +F +
Sbjct: 70 LSLPKNFAI 78
>gi|260836373|ref|XP_002613180.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
gi|229298565|gb|EEN69189.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
Length = 612
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ E FL+C C + PK+LPC HT C CL A +TR+ +CP+CR
Sbjct: 13 QQMREEFLSCSICTDTFK----KPKVLPCQHTFCSTCLRDWA--ETRK--PFQCPMCRVS 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHN 122
+ +P GV+ + LV L + S + PK N
Sbjct: 65 VDLPAQGVSGFQDNRLVAGLCEQFSDKLSTSPPKAEQRN 103
>gi|405975549|gb|EKC40108.1| Tripartite motif-containing protein 59 [Crassostrea gigas]
Length = 164
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL +Y +P LPC H+ C CL +A Q TL CP CR I IP GG
Sbjct: 9 LSCSICLELY----RSPLTLPCLHSFCAECLRELA--QGSNGPTLSCPQCRANIQIPGGG 62
Query: 91 VAALPPSFLVNQLLDLMSRQRRHII 115
VA P +F + ++ R R I+
Sbjct: 63 VANFPKNFNLESIIGESRRCLRTIV 87
>gi|50759253|ref|XP_417589.1| PREDICTED: RING finger protein 223 [Gallus gallus]
Length = 269
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA--SQTRETGTLRCPICREQITI 86
S + C C YD TPKLL CSH CL C++R++ L CP CR+ +I
Sbjct: 65 SPVECSICFNTYDNTFKTPKLLQCSHVFCLECVARLSKGLPPNHPEDQLPCPFCRQLTSI 124
Query: 87 PRGGVAAL 94
P+ G AL
Sbjct: 125 PQEGAPAL 132
>gi|260812615|ref|XP_002601016.1| hypothetical protein BRAFLDRAFT_128153 [Branchiostoma floridae]
gi|229286306|gb|EEN57028.1| hypothetical protein BRAFLDRAFT_128153 [Branchiostoma floridae]
Length = 479
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLL-PCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
FL C C ++ PK+L PC HT C CL +ET CP+C ++T+P
Sbjct: 83 DFLECSICCDIFK----KPKILIPCLHTFCALCLQEWVKRNVKET--FPCPLCCHEVTLP 136
Query: 88 RGGVAALPPSFLVNQLLDLMSRQ 110
+ GVA L +F + L++ ++ Q
Sbjct: 137 QNGVAGLKDNFFMESLVEALAEQ 159
>gi|291241186|ref|XP_002740491.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 1135
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-LRCPICRE 82
++ +E+FL+CG C Y K+LPC H+ C HCL ++ +TG + CP+CR
Sbjct: 12 DEIDETFLSCGVCSERYSNA----KVLPCQHSFCEHCLIKL----VEKTGQPIHCPLCRR 63
Query: 83 QITIPRGGVAALPPSFLVNQL 103
+ I V+ LP ++ +N++
Sbjct: 64 KHDIE---VSDLPNNYFINEI 81
>gi|324504230|gb|ADY41827.1| RING finger protein nhl-1, partial [Ascaris suum]
Length = 831
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT CL CL A R L+CP CR + +P
Sbjct: 48 EQLLTCPICLDRY----KQPKLLPCHHTFCLPCLDNCADVIHR---VLKCPECRAEHPLP 100
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV + ++ + LD+
Sbjct: 101 YDGVKSFQTNYTLTGFLDI 119
>gi|260795386|ref|XP_002592686.1| hypothetical protein BRAFLDRAFT_67125 [Branchiostoma floridae]
gi|229277909|gb|EEN48697.1| hypothetical protein BRAFLDRAFT_67125 [Branchiostoma floridae]
Length = 360
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 16 VETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL 75
V T+S+ + E LTC CL +++ PK+LPC HT C CL ++ ++ T
Sbjct: 6 VATLSLGEQIHEE--LTCSICLELFN----KPKVLPCQHTFCQGCLQQLTLNK---TTLF 56
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQIKKL 128
+CP+C + P GV ALP + LV L + Q +R +C H S+ KL
Sbjct: 57 QCPVCSQWARKPCQGVKALPDNILVTTLQMRVQHQATPVKRKRESKDRCVLHQSEEIKL 115
>gi|297850596|ref|XP_002893179.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339021|gb|EFH69438.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1579
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL +DG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSFDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|432891851|ref|XP_004075679.1| PREDICTED: tripartite motif-containing protein 59-like [Oryzias
latipes]
Length = 420
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
D E LTC C ++ P++LPCSHT C CL + T + ++CP
Sbjct: 2 DSLEEDLTCSVCYQLFSD----PRVLPCSHTFCQPCLENLLQVSTNYSIWRPLRLPIKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
CR + +P GV ALP + + +++ R P C H Q
Sbjct: 58 NCRSVVELPPAGVDALPSNVSLRAIIEKYQRDEEPRPPSCQEHPRQ 103
>gi|426225987|ref|XP_004007138.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 224 [Ovis
aries]
Length = 197
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HTVC C+ R+AA E + CP CR+ +PRGGVA
Sbjct: 64 CVVCYSAYDLAGHLPRRLYCGHTVCQACVRRLAAPAP-EQRWVPCPQCRQSTPVPRGGVA 122
Query: 93 AL 94
L
Sbjct: 123 ML 124
>gi|383857483|ref|XP_003704234.1| PREDICTED: RING finger protein nhl-1-like isoform 1 [Megachile
rotundata]
Length = 1233
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|321471405|gb|EFX82378.1| hypothetical protein DAPPUDRAFT_302628 [Daphnia pulex]
Length = 189
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC CL YD PK L CSHT+CL C TR+ T+ CP CR++
Sbjct: 10 EELVTCNICLNQYDEEIRKPKFLQCSHTICLECFQA-----TRQEDTVTCPFCRQRTLKD 64
Query: 88 RGG 90
G
Sbjct: 65 NGD 67
>gi|156384113|ref|XP_001633176.1| predicted protein [Nematostella vectensis]
gi|156220242|gb|EDO41113.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E +TC C+ EH P+LLPC HT C HCL +A + G L CP+C+ +
Sbjct: 10 EDEVTCAICI------EHFTDPRLLPCLHTFCRHCLEDLAEHSGK--GKLVCPLCKVEYE 61
Query: 86 IPRGGVAALPPSFLVNQLLDLMS 108
I + +L +F +N L+ ++S
Sbjct: 62 IAVADIPSLKVNFPINNLISILS 84
>gi|321471278|gb|EFX82251.1| hypothetical protein DAPPUDRAFT_316927 [Daphnia pulex]
Length = 533
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+ F+ C C C YD PK LPCSHTVC+ CL I G+ CP C
Sbjct: 11 DDFVNCDVCWCEYDANCRKPKFLPCSHTVCILCLREIY-----RDGSFTCPTC 58
>gi|156363296|ref|XP_001625981.1| predicted protein [Nematostella vectensis]
gi|156212840|gb|EDO33881.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 64 PADVPSLKVNFMINSIISVL 83
>gi|390342663|ref|XP_003725710.1| PREDICTED: tripartite motif-containing protein 45-like
[Strongylocentrotus purpuratus]
Length = 653
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C ++ + + L C H+ C C+ R A++ +++ T+ CPICR T+P GV
Sbjct: 19 CSICWQKFE----SARFLACFHSFCELCIERCASTSSKQN-TVVCPICRHCTTLPEVGVR 73
Query: 93 ALPPSFLVNQLLD 105
LP +F++N+++D
Sbjct: 74 GLPLNFIMNRMVD 86
>gi|156360812|ref|XP_001625218.1| predicted protein [Nematostella vectensis]
gi|156212040|gb|EDO33118.1| predicted protein [Nematostella vectensis]
Length = 374
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 15 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 69
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 70 PADVLSLKVNFMINSIISVL 89
>gi|383857485|ref|XP_003704235.1| PREDICTED: RING finger protein nhl-1-like isoform 2 [Megachile
rotundata]
Length = 1297
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|431922636|gb|ELK19556.1| RING finger protein 183 [Pteropus alecto]
Length = 267
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETG--TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q + G + CP CR+
Sbjct: 56 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAATQPAGQPGGEAVPCPFCRQPTA 115
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 116 VPPAGAPAL 124
>gi|156358733|ref|XP_001624670.1| predicted protein [Nematostella vectensis]
gi|156211463|gb|EDO32570.1| predicted protein [Nematostella vectensis]
Length = 313
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 65 PADVPSLKVNFMINSIISVL 84
>gi|255558580|ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223540534|gb|EEF42101.1| F-box and wd40 domain protein, putative [Ricinus communis]
Length = 1794
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL + + T+RCP C + + P G +
Sbjct: 6 CPVCLQNYDGEYAIPRVLTCGHTTCESCLKSLPQKYPQ---TIRCPACVQLVKFPSLGPS 62
Query: 93 ALPPSFLVNQLLDLMSRQRRHI 114
+LP + + +L+ ++++ I
Sbjct: 63 SLPKNIDLLRLIPTNHKKKQPI 84
>gi|390360650|ref|XP_003729738.1| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like, partial
[Strongylocentrotus purpuratus]
Length = 426
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C CL ++D +L C HT C CL R A+ R+ + CP+CR+ +
Sbjct: 13 ILCPLCLDVFDNA----SMLICGHTFCKQCLERYDAAH-RDLDHMVCPLCRKVTKLAESR 67
Query: 91 VAALPPSFLVNQLLD 105
VA LPP+F V L+D
Sbjct: 68 VAGLPPNFTVKALVD 82
>gi|390356913|ref|XP_003728887.1| PREDICTED: uncharacterized protein LOC100893496 [Strongylocentrotus
purpuratus]
Length = 307
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C C G + LPC HT C CL+R +A+ T G ++C C+ + +P
Sbjct: 10 EEMLKCSVC----QGRIKDARSLPCGHTYCKDCLTR-SANATYPPGGIQCAECQNRYQLP 64
Query: 88 RGGVAALPPSFLVNQLLD 105
GG LP F +N LLD
Sbjct: 65 FGGAEGLPRCFAINSLLD 82
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+C CL + + LPC H+ C CL Q R T ++C C + IP G
Sbjct: 107 FSCAFCLNLM----RDARYLPCGHSFCRECLK----MQPRTTPCIKCSKCLKDHNIPARG 158
Query: 91 VAALPPSFLVNQLL 104
+ LP ++ +N ++
Sbjct: 159 IDGLPVAYRINSIV 172
>gi|328779273|ref|XP_391967.4| PREDICTED: RING finger protein nhl-1-like [Apis mellifera]
Length = 1281
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|443702929|gb|ELU00752.1| hypothetical protein CAPTEDRAFT_224213 [Capitella teleta]
Length = 647
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 29 SFLTCGTCLCMYDGGEHT-PKLLPCSHTVCLHCLSRIAASQTRETG-----TLRCPICRE 82
+L C C G E T PK+LPC H+ C CL + R++G CPICR
Sbjct: 22 DYLHCPAC-----GDEFTSPKILPCLHSFCFECLD----TSLRDSGIGNGQAFLCPICRA 72
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKLR 129
Q +P GV AL + + L D + R+ +C +S+ K R
Sbjct: 73 QCVVPMRGVRALKSNIFLVTLQDFVDRKTLDKDQRCEVCDSEKKARR 119
>gi|270013854|gb|EFA10302.1| hypothetical protein TcasGA2_TC012517 [Tribolium castaneum]
Length = 2020
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ CL + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCLEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + + + L+L
Sbjct: 58 PYQGVQGFPTNVTLQRFLEL 77
>gi|113679514|ref|NP_001038816.1| RING finger protein 182 [Danio rerio]
gi|112418713|gb|AAI22280.1| Zgc:153414 [Danio rerio]
Length = 248
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F L C C C Y PK+L C H +C CL++I + CP CR
Sbjct: 13 FTTEELECKICYCAYSLSSRRPKVLKCCHCLCAKCLAKIHDLGESSPNAVICPFCRYITE 72
Query: 86 IPRGGVAALPPSF-LVNQLLDLMSRQRRHI 114
+PR V +LP + LV+ LL R+ ++
Sbjct: 73 LPREDVDSLPDEYNLVSALLSFQMRKSHNL 102
>gi|189241070|ref|XP_001808548.1| PREDICTED: similar to AGAP007135-PA [Tribolium castaneum]
Length = 1245
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ CL + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCLEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + + + L+L
Sbjct: 58 PYQGVQGFPTNVTLQRFLEL 77
>gi|156358729|ref|XP_001624668.1| predicted protein [Nematostella vectensis]
gi|156211461|gb|EDO32568.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFKIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V++L +F++N ++ ++
Sbjct: 65 PADVSSLKVNFMINSIISVL 84
>gi|390365930|ref|XP_001184985.2| PREDICTED: tripartite motif containing 13-like [Strongylocentrotus
purpuratus]
Length = 175
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK L CSHT C CL + AS + L CP CRE+ ++P G
Sbjct: 13 LECPVCLSFFK----DPKNLTCSHTFCKGCLETVLASHRK----LLCPTCREETSVPGGD 64
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V L P+ +V L++ + Q
Sbjct: 65 VGRLKPNIIVRSLVEDVETQ 84
>gi|260825454|ref|XP_002607681.1| hypothetical protein BRAFLDRAFT_123270 [Branchiostoma floridae]
gi|229293030|gb|EEN63691.1| hypothetical protein BRAFLDRAFT_123270 [Branchiostoma floridae]
Length = 616
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ FL+C CL + H PK LPC HT C CL A + +CP CR +
Sbjct: 14 DEFLSCSICLEPF----HQPKTLPCLHTFCEECLRDHAEVRP----GFQCPTCRRHAVLG 65
Query: 88 RGGVAALPPSFLVNQLLDLMSRQ-RRHIIPKCSTHNSQIKKL 128
GVA LP + ++ L + Q +C H+ + KL
Sbjct: 66 PDGVAGLPDNHFISSLCHTVLEQGTAEYESQCGAHSPEELKL 107
>gi|156344700|ref|XP_001621281.1| hypothetical protein NEMVEDRAFT_v1g145471 [Nematostella vectensis]
gi|156360545|ref|XP_001625088.1| predicted protein [Nematostella vectensis]
gi|156207051|gb|EDO29181.1| predicted protein [Nematostella vectensis]
gi|156211903|gb|EDO32988.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGKGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N L ++
Sbjct: 65 PADVPSLKVNFMINSTLSVL 84
>gi|156363314|ref|XP_001625990.1| predicted protein [Nematostella vectensis]
gi|156212849|gb|EDO33890.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 64 PADVPSLKVNFMINSIISVL 83
>gi|157822147|ref|NP_001102415.1| tripartite motif-containing protein 59 [Rattus norvegicus]
gi|149048334|gb|EDM00910.1| rCG63400 [Rattus norvegicus]
gi|197245953|gb|AAI68884.1| Tripartite motif-containing 59 [Rattus norvegicus]
Length = 403
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C ++D P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFDD----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+CP CR I I G+ +LP +F + +++ ++ + C H Q
Sbjct: 55 KCPNCRSIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQ 103
>gi|291224862|ref|XP_002732421.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 473
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ +E FLTC C PK+L C H+ C CL AA CP+CR
Sbjct: 13 DKIDEDFLTCSICQERI----TNPKILDCLHSFCARCLKDYAAKNPIFKANPSCPVCRMS 68
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+P GV L +F V+++ + R+
Sbjct: 69 FRLPESGVDGLKNNFFVSEICKVFESYRK 97
>gi|391336193|ref|XP_003742466.1| PREDICTED: RING finger protein nhl-1-like [Metaseiulus
occidentalis]
Length = 851
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC C+ + PKLLPC HT C C+ + R+ ++CP CR + I
Sbjct: 9 EQLLTCAICMDRFK----NPKLLPCQHTYCCDPCMEGLVDYARRQ---IKCPECRTEHRI 61
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV LP + + + L+L
Sbjct: 62 PYNGVQTLPTNVTLMRFLEL 81
>gi|332025715|gb|EGI65873.1| RING finger protein nhl-1 [Acromyrmex echinatior]
Length = 1199
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|260841653|ref|XP_002614025.1| hypothetical protein BRAFLDRAFT_67391 [Branchiostoma floridae]
gi|229299415|gb|EEN70034.1| hypothetical protein BRAFLDRAFT_67391 [Branchiostoma floridae]
Length = 1084
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L CG CL ++ PK L C HT C CL + ++ L CP CR +++P G
Sbjct: 416 LHCGICLEPFN----NPKALACLHTFCQECLVNLVGKRS----FLTCPTCRTSVSLPPKG 467
Query: 91 VAALPPSFLVNQL 103
V LP +F +++L
Sbjct: 468 VQGLPDNFWLSEL 480
>gi|321467873|gb|EFX78861.1| hypothetical protein DAPPUDRAFT_320138 [Daphnia pulex]
Length = 368
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + + FL C C YD PK+LPCSHT C CL + + TL+CP+CR +
Sbjct: 8 ELYQDEFLCCSICFHKYDLQLMRPKVLPCSHTFCFTCLKALHSGN-----TLKCPVCRRE 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+ V LP + V ++ L + R
Sbjct: 63 -AVEITDVLTLPNNKYVQYIVHLSEKLR 89
>gi|291232828|ref|XP_002736356.1| PREDICTED: NHL (ring finger b-box coiled coil) domain containing
family member (nhl-1)-like [Saccoglossus kowalevskii]
Length = 871
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E L C CL Y+ PK+LPC HT C CL + + R+ L+CP CR + +
Sbjct: 6 EELLNCAVCLERYN----RPKILPCQHTFCQSPCLENLIDIRVRK---LKCPECRMEHRV 58
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + +++ LD+
Sbjct: 59 PGNGVRGFPNNVTISRFLDI 78
>gi|390369496|ref|XP_003731650.1| PREDICTED: uncharacterized protein LOC100890066 [Strongylocentrotus
purpuratus]
Length = 308
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C C G + LPC HT C CL+R +A+ T G+++C C++ +P
Sbjct: 10 EEMLKCSAC----QGRIKDTRSLPCGHTFCSDCLAR-SANATYPRGSIQCAECKKTSQLP 64
Query: 88 RGGVAALPPSFLVNQLLD 105
GG LP F +N LLD
Sbjct: 65 FGGAEGLPRCFAINSLLD 82
>gi|291237713|ref|XP_002738777.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 676
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ +E LTC CL Y P++LPC H+ C CL ++ + T++CP CR+
Sbjct: 31 DEIDEDLLTCSVCLERY----KNPQILPCYHSFCEQCLVKLKGPR----DTIKCPNCRQL 82
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC 118
+ + L PS ++N ++D++ + H I +C
Sbjct: 83 HYV--SNMQQLSPSTIINSVIDII---KEHEIQRC 112
>gi|449500824|ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis
sativus]
Length = 741
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
F C CL YDG P++L C H+ C CL + R T+RCP C + P
Sbjct: 3 FPECPVCLQTYDGESIVPRVLSCGHSACGTCLENLP---QRFPETIRCPACNVLVKFPSQ 59
Query: 90 GVAALP 95
G +ALP
Sbjct: 60 GASALP 65
>gi|198430730|ref|XP_002126068.1| PREDICTED: similar to ring finger protein Fxy [Ciona intestinalis]
Length = 945
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-------TLRCPIC 80
E+ LTC CL ++ H P LLPC+H +C C+ + +S R +G T +CP C
Sbjct: 235 ENELTCPICLDLF----HEPILLPCAHNLCAGCVEQFVSSH-RTSGDQSGFRPTFKCPTC 289
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP 116
RE IT+ G L + + ++D R + P
Sbjct: 290 REMITLDSRGANGLRRNLTLQNIVDGYRRAAASVSP 325
>gi|156363310|ref|XP_001625988.1| predicted protein [Nematostella vectensis]
gi|156212847|gb|EDO33888.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 64 PADVPSLKVNFMINSIISVL 83
>gi|321468757|gb|EFX79740.1| hypothetical protein DAPPUDRAFT_304337 [Daphnia pulex]
Length = 1319
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICRE 82
E F++ LTC CL Y PKLLPC H+ C+ C+ + TR+ ++CP CR
Sbjct: 2 EQFDQ-LLTCCVCLDRY----RNPKLLPCQHSFCMEPCMEGLINYVTRQ---VKCPECRA 53
Query: 83 QITIPRGGVAALPPSFLVNQLLDL 106
+ IP G+AA P + + + L+L
Sbjct: 54 EHRIPYQGIAAYPTNVTLQRFLEL 77
>gi|426218032|ref|XP_004003254.1| PREDICTED: tripartite motif-containing protein 59 [Ovis aries]
Length = 404
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 5 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 52
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 53 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQ 105
>gi|291236039|ref|XP_002737949.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 503
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +E L C C Y KLLPC H+ C CL + S++ G + CP+CR +
Sbjct: 11 EELDEDLLNCEICSDRYTNA----KLLPCQHSFCEDCLVTM-VSRSGLPGVVICPLCRRK 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
IP GG++ + + +NQL+++ +
Sbjct: 66 HDIP-GGISNVENNMFINQLVEVFN 89
>gi|296491141|tpg|DAA33214.1| TPA: tripartite motif-containing 59 [Bos taurus]
Length = 362
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQ 103
>gi|426244497|ref|XP_004016058.1| PREDICTED: tripartite motif-containing protein 59-like [Ovis aries]
Length = 402
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQ 103
>gi|308486749|ref|XP_003105571.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
gi|308255537|gb|EFO99489.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
Length = 193
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL-RCPICREQ 83
N ++CG CL YD E PK+L C HT+CL CL + S G L CP CRE+
Sbjct: 125 NRDAMSCGICLENYDNDEKLPKVLDCGHTICLVCLDSLEKS----NGHLVSCPFCREK 178
>gi|260835105|ref|XP_002612550.1| hypothetical protein BRAFLDRAFT_120965 [Branchiostoma floridae]
gi|229297927|gb|EEN68559.1| hypothetical protein BRAFLDRAFT_120965 [Branchiostoma floridae]
Length = 389
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK LPC HT C CL+ +A S L CP+CR +++P GVA LP + + ++ +
Sbjct: 70 PKSLPCGHTFCEECLTELAGSLR----DLCCPLCRRDVSLPVDGVAGLPTDYRLAKMSEK 125
Query: 107 MSR----QRRHIIPKCSTH 121
S Q + + +C H
Sbjct: 126 FSEVTADQGQCVTQRCDYH 144
>gi|449459378|ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212974 [Cucumis sativus]
Length = 761
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
F C CL YDG P++L C H+ C CL + R T+RCP C + P
Sbjct: 3 FPECPVCLQTYDGESIVPRVLSCGHSACGTCLENLP---QRFPETIRCPACNVLVKFPSQ 59
Query: 90 GVAALP 95
G +ALP
Sbjct: 60 GASALP 65
>gi|291221732|ref|XP_002730875.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 617
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL+C CL + PK+LPC HT C CL A + G L+C CR Q
Sbjct: 11 EIGEDFLSCSICLEFFK----NPKVLPCLHTFCEQCLVTFKA---KSEGDLKCATCRIQC 63
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ L +F + LLD R R+
Sbjct: 64 DT---SIQELKSNFFLTSLLDTFQRLRQ 88
>gi|156359735|ref|XP_001624921.1| predicted protein [Nematostella vectensis]
gi|156211727|gb|EDO32821.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V++L +F++N ++ ++
Sbjct: 65 PADVSSLKVNFMINSIISVL 84
>gi|122692451|ref|NP_001073779.1| tripartite motif-containing protein 59 [Bos taurus]
gi|86437977|gb|AAI12617.1| Hypothetical LOC540154 [Bos taurus]
Length = 361
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQ 103
>gi|156360806|ref|XP_001625215.1| predicted protein [Nematostella vectensis]
gi|156212037|gb|EDO33115.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V++L +F++N ++ ++
Sbjct: 65 PADVSSLKVNFMINSIISVL 84
>gi|156347788|ref|XP_001621753.1| hypothetical protein NEMVEDRAFT_v1g42496 [Nematostella vectensis]
gi|156207993|gb|EDO29653.1| predicted protein [Nematostella vectensis]
Length = 276
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 65 PADVPSLKVNFMINSIISVL 84
>gi|449268473|gb|EMC79337.1| RING finger protein 183, partial [Columba livia]
Length = 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRETGTLRCPICREQITI 86
S + C C YD TPKLL CSH CL C++R++ + L CP CR+ +I
Sbjct: 6 SPVECSICFNTYDNTFKTPKLLQCSHVFCLECVARLSTGLPPNQPEDQLPCPFCRQLTSI 65
Query: 87 PRGGVAAL 94
P G AL
Sbjct: 66 PMEGAPAL 73
>gi|281341327|gb|EFB16911.1| hypothetical protein PANDA_020982 [Ailuropoda melanoleuca]
Length = 402
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPSCRSIIEIAPTGIESLPVNFALKAIIEKYQQEDHRDIVTCPEHYRQ 103
>gi|156390777|ref|XP_001635446.1| predicted protein [Nematostella vectensis]
gi|156222540|gb|EDO43383.1| predicted protein [Nematostella vectensis]
Length = 589
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 33 CGTCLCMYDGGEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
C +C+ D E PK LP C+H VC CL +A E+ +RCP+CR++ T+P G+
Sbjct: 21 CSCPVCLEDFLE--PKSLPNCAHNVCRKCLEGMATDS--ESKEIRCPVCRKESTLPEDGI 76
Query: 92 AALPPSFLVNQLLDLM-SRQRRHIIPKC 118
LP + L+ +LL+ R R I +C
Sbjct: 77 NGLPTNCLIVKLLEATPGRIERLEIRRC 104
>gi|156361058|ref|XP_001625338.1| predicted protein [Nematostella vectensis]
gi|156212166|gb|EDO33238.1| predicted protein [Nematostella vectensis]
Length = 282
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E +TC C+ EH P++LPC H+ C HCL +A + G L CP+C+ +
Sbjct: 10 EDEVTCSICI------EHLNDPRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQ 62
Query: 86 IPRGGVAALPPSFLVNQLLDLM 107
I V +L +F++N +L ++
Sbjct: 63 ISPADVPSLKVNFMINSILSVL 84
>gi|390365179|ref|XP_003730766.1| PREDICTED: uncharacterized protein LOC100891998 [Strongylocentrotus
purpuratus]
Length = 633
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C CL ++D +L C HT C CL R A+ R+ + CP+CR+ + +
Sbjct: 13 ILCPLCLDVFDNA----SMLICGHTFCKQCLERYDAAH-RDLDHMVCPLCRKVTKLDKSR 67
Query: 91 VAALPPSFLVNQLLD 105
VA LP +F VN L+D
Sbjct: 68 VAGLPTNFTVNGLVD 82
>gi|301791023|ref|XP_002930511.1| PREDICTED: tripartite motif-containing protein 59-like [Ailuropoda
melanoleuca]
Length = 403
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPSCRSIIEIAPTGIESLPVNFALKAIIEKYQQEDHRDIVTCPEHYRQ 103
>gi|260788947|ref|XP_002589510.1| hypothetical protein BRAFLDRAFT_88379 [Branchiostoma floridae]
gi|229274688|gb|EEN45521.1| hypothetical protein BRAFLDRAFT_88379 [Branchiostoma floridae]
Length = 1338
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PK+LPC HT C CL ++A R+ ++CP CR I
Sbjct: 15 EQLLTCPVCLDRYK----RPKILPCQHTFCQDPCLQQLADPVRRK---VKCPECRAMHNI 67
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P G++ P + + + LDL
Sbjct: 68 PPKGISGFPNNITILKFLDL 87
>gi|321471270|gb|EFX82243.1| hypothetical protein DAPPUDRAFT_316918 [Daphnia pulex]
Length = 355
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
E F+ CG C C +D PK L C+HTVC +CL +I + CP CR+
Sbjct: 12 EHFVNCGVCFCEFDEENRKPKFLLCAHTVCFNCLQKICLKD-----MISCPFCRKNF 63
>gi|405963292|gb|EKC28879.1| SH3 domain-containing RING finger protein 3 [Crassostrea gigas]
Length = 784
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
++ + NE L C CL D HT K+LPC HT C CL I ++ RE LRCP C
Sbjct: 1 MDEQSLNE-LLECSVCLDRLD---HTSKVLPCQHTFCRRCLDEIYGTK-RE---LRCPEC 52
Query: 81 REQITIPRGGVAALPPSFLVNQLLD 105
R + IP V LP + L+ +LL+
Sbjct: 53 RTLVEIP---VEELPSNILLIRLLE 74
>gi|338722208|ref|XP_003364505.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 183-like [Equus
caballus]
Length = 249
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-RETG--TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q + G + CP CR+
Sbjct: 45 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPMGQPGGEAVPCPFCRQPTA 104
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 105 VPAAGAPAL 113
>gi|242011481|ref|XP_002426477.1| nhl repeat-containing protein, putative [Pediculus humanus
corporis]
gi|212510603|gb|EEB13739.1| nhl repeat-containing protein, putative [Pediculus humanus
corporis]
Length = 1324
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + + + L+L
Sbjct: 58 PYQGVQGYPTNVTLQRFLEL 77
>gi|395840771|ref|XP_003793225.1| PREDICTED: RING finger protein 223 [Otolemur garnettii]
Length = 239
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR---ETGTLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q + + CP CR+
Sbjct: 38 SPLECSICFSGYDNIFRTPKELTCTHVFCLECLARLAAAQPAGHPGSEAVPCPFCRKPTA 97
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 98 LPPAGAPAL 106
>gi|156349351|ref|XP_001622021.1| hypothetical protein NEMVEDRAFT_v1g142847 [Nematostella vectensis]
gi|156208416|gb|EDO29921.1| predicted protein [Nematostella vectensis]
Length = 276
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C ++ P++LPC H+ C HCL +A + G L CP+C+ I
Sbjct: 10 EDEVTCSICKEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAGFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLMS 108
V++L +F++N ++ ++S
Sbjct: 65 PADVSSLKVNFMINSIISVLS 85
>gi|334347426|ref|XP_003341926.1| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 529
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRETGTLRCPICREQIT 85
E L C C +++ P++LPCSHT C CL + + + CP CR +
Sbjct: 5 EEELMCPICYSIFE----DPRVLPCSHTFCRKCLENVLQVSENVFRQSIMTCPTCRYLVE 60
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P G+ +LP +F + +++ ++ C H SQ
Sbjct: 61 FPPRGIDSLPINFALRAIIEKCKKEDHPDGITCPEHFSQ 99
>gi|322790124|gb|EFZ15151.1| hypothetical protein SINV_06003 [Solenopsis invicta]
Length = 337
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 6 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 58
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 59 PYQGVQAFPTNVTLQRFLEL 78
>gi|332214610|ref|XP_003256428.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Nomascus leucogenys]
Length = 410
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----- 74
S+ +F E LTC C +++ P++LPCSHT C +CL I +
Sbjct: 5 SLEMHNFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRI 59
Query: 75 -LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 60 PLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 110
>gi|321471275|gb|EFX82248.1| hypothetical protein DAPPUDRAFT_316924 [Daphnia pulex]
Length = 871
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F F+TC C+ Y+ PK+LPCSHTVC CL I + + CP CR+
Sbjct: 5 FENDFVTCSICMNEYNEYTRKPKVLPCSHTVCFTCLQGIF-----QDNAIACPYCRQSFK 59
Query: 86 IPRGG 90
+ GG
Sbjct: 60 L--GG 62
>gi|156388837|ref|XP_001634699.1| predicted protein [Nematostella vectensis]
gi|156221785|gb|EDO42636.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 17 ETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR 76
ET IN D +TC CL Y P++L C HT C HCL + ++E T+
Sbjct: 5 ETTPINVSD-----VTCSLCLEQY----QDPRVLACLHTYCRHCLESLV-EHSKEC-TVS 53
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
CP CRE+I I V L F++ L++ MS
Sbjct: 54 CPQCREKIEISVEEVKCLKVDFMLIDLIEKMS 85
>gi|260793565|ref|XP_002591782.1| hypothetical protein BRAFLDRAFT_123529 [Branchiostoma floridae]
gi|229276992|gb|EEN47793.1| hypothetical protein BRAFLDRAFT_123529 [Branchiostoma floridae]
Length = 535
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR-ETGTLRCPICREQIT 85
+E FL C C + PK+L C HT CL CL R T CP+CR++
Sbjct: 10 SEDFLKCQICHDTF----KRPKVLSCLHTFCLQCLKSYLKKNPRVSIKTFLCPLCRQETA 65
Query: 86 IPRGGVAALPPSFLVNQLLDLMS 108
P G L +F V+ LL+ +S
Sbjct: 66 TPPTGADGLKDNFFVSNLLEALS 88
>gi|118358184|ref|XP_001012341.1| Kelch motif family protein [Tetrahymena thermophila]
gi|89294107|gb|EAR92095.1| Kelch motif family protein [Tetrahymena thermophila SB210]
Length = 695
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C C +YD +H P+ LPC HT C CL +I + G + CP CR++++ P
Sbjct: 1 MECPMCYILYDEKKHIPRNLPCGHTFCELCLQQILQPK----GFIECPSCRKKLS-PDVR 55
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
+L +F+ L L Q + + C TH
Sbjct: 56 PESLSKNFIALDLA-LKQHQLQSKLQLCDTH 85
>gi|260781255|ref|XP_002585735.1| hypothetical protein BRAFLDRAFT_72273 [Branchiostoma floridae]
gi|229270771|gb|EEN41746.1| hypothetical protein BRAFLDRAFT_72273 [Branchiostoma floridae]
Length = 488
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ + FL C CL + PK+LPC HT CL+ A + + + CP CR +
Sbjct: 7 KEISNDFLECQICLQSF----REPKILPCLHTFGKGCLAEYAKAHCVDGDQIECPTCRSK 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+P G V L +F V L D ++
Sbjct: 63 SPLPGGTVDGLKNNFFVESLKDTVN 87
>gi|195335764|ref|XP_002034533.1| GM21929 [Drosophila sechellia]
gi|194126503|gb|EDW48546.1| GM21929 [Drosophila sechellia]
Length = 720
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|443725741|gb|ELU13192.1| hypothetical protein CAPTEDRAFT_94102, partial [Capitella teleta]
Length = 95
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE----TGTLRCPICREQI 84
S +TC C ++ PK+LPC HT C CL + + + + CP CR+ I
Sbjct: 15 SLVTCDICTEVF----RQPKVLPCQHTFCFECLQKFCENCNKHRIYRITSFPCPSCRKLI 70
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR 109
+P GG+ LP F V Q+ + + +
Sbjct: 71 HLPAGGIQQLPNDFRVAQICEFIEK 95
>gi|326917698|ref|XP_003205133.1| PREDICTED: tripartite motif-containing protein 55-like isoform 1
[Meleagris gallopavo]
Length = 414
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
L MS++L S E ++ D E L C CL M+ +LPC H +C C S
Sbjct: 6 LGMSTSLGYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCAS 59
Query: 63 RI-----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-- 109
I + G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 60 DIFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES 119
Query: 110 ---QRRHIIPKCSTHNSQ 124
+R+ +P C H +
Sbjct: 120 TRPERKCDLPMCEEHEDE 137
>gi|308387350|ref|NP_001184142.1| muscle RING finger 1 [Oncorhynchus mykiss]
gi|308053490|gb|ADO00982.1| muscle RING finger 1 [Oncorhynchus mykiss]
Length = 359
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
ES L+C CL M+ + +LPC H +C C S + S+ G RCP CR ++
Sbjct: 19 ESQLSCPICLEMF---QKPVVILPCQHNLCRGCASDLYDSRNPYHYSGGIFRCPTCRFEV 75
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+ R GV L + LV ++D+ +Q
Sbjct: 76 VLDRHGVYGLQRNLLVENIIDIYKQQ 101
>gi|390368048|ref|XP_003731380.1| PREDICTED: midline-1-like [Strongylocentrotus purpuratus]
Length = 394
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL +Y P LL CSHT C CLSR+ SQ +E+ + CP+CR+ +P
Sbjct: 13 LQCPICLNIYK----EPTLLACSHTFCKGCLSRLFKSQ-QESAKISCPVCRKSTAVPSRD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR 112
V+ L + + +++ + Q +
Sbjct: 68 VSNLQINIPIQAMVEDIKNQSQ 89
>gi|158286215|ref|XP_308626.4| AGAP007135-PA [Anopheles gambiae str. PEST]
gi|157020362|gb|EAA04156.5| AGAP007135-PA [Anopheles gambiae str. PEST]
Length = 1351
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLIDYVKRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + + + L+L
Sbjct: 58 PYQGVQGFPTNVTLQRFLEL 77
>gi|156360555|ref|XP_001625093.1| predicted protein [Nematostella vectensis]
gi|156211908|gb|EDO32993.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 64 PADVPSLKVNFMINSIISVL 83
>gi|260811376|ref|XP_002600398.1| hypothetical protein BRAFLDRAFT_237354 [Branchiostoma floridae]
gi|229285685|gb|EEN56410.1| hypothetical protein BRAFLDRAFT_237354 [Branchiostoma floridae]
Length = 61
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ F+E FLTC C+ + PK+LPC HT C CL A Q L CP CR Q
Sbjct: 3 DGFDEEFLTCPVCMLHF----RDPKILPCLHTFCTECLKEWATKQQ----PLECPTCRAQ 54
Query: 84 ITIPRGG 90
++P G
Sbjct: 55 FSLPDQG 61
>gi|291243237|ref|XP_002741510.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 735
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFL 99
PK LPC HTVC CL ++ + G + CP+C E++ IP GV P + L
Sbjct: 32 PKFLPCLHTVCRDCLVKVYGGR---RGPINCPVCSEKVPIPSNGVDGFPYNVL 81
>gi|403297845|ref|XP_003939759.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 223 [Saimiri
boliviensis boliviensis]
Length = 411
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG---TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+ A+Q + + CP CR+
Sbjct: 209 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLVAAQPEGSPGSEAVPCPFCRQPTA 268
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 269 VPPAGAPAL 277
>gi|334349731|ref|XP_001378274.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 338
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG--TLRCPICREQIT 85
E LTC C +++ P++LPCSHT C CL + + G + CP CR I
Sbjct: 5 EEELTCPICYSIFE----DPRVLPCSHTFCRKCLENVLQASGNFYGRRDITCPTCRHIIE 60
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I G+ +LP +F + +++ ++ C H+SQ
Sbjct: 61 ITPPGIDSLPINFALRAIIEKYEQEEHPDGITCPEHSSQ 99
>gi|328719579|ref|XP_001944980.2| PREDICTED: hypothetical protein LOC100167755 [Acyrthosiphon pisum]
Length = 1280
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICRE 82
E F++ LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR
Sbjct: 2 EQFDQ-LLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRA 53
Query: 83 QITIPRGGVAALPPSFLVNQLLDL 106
+ IP GV P + + + L+L
Sbjct: 54 EHRIPYNGVQGYPTNVTLQRFLEL 77
>gi|25151067|ref|NP_740796.1| Protein Y51F10.2 [Caenorhabditis elegans]
gi|373220546|emb|CCD73473.1| Protein Y51F10.2 [Caenorhabditis elegans]
Length = 305
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCL------SRIAASQ---TRETGTLRCPICRE 82
+C CL +D G+H PK+L C+HTVC C+ SRI ++ R +RCP+CR
Sbjct: 18 SCRICLEPFDEGQHLPKILQCAHTVCERCIGLLDEQSRINHNRPPIDRSFVHIRCPVCRA 77
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHII 115
PR + + ++ + +L+D M + H I
Sbjct: 78 VTQTPRNYIRS---NYQLIELMDSMRGEADHNI 107
>gi|390368050|ref|XP_003731381.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 176
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL +Y P LL CSHT C CLSR+ SQ +E+ + CP+CR+ +P
Sbjct: 13 LQCPICLNIY----KEPTLLACSHTFCKGCLSRLFKSQ-QESAKISCPVCRKSTAVPSRD 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V+ L + + +++ + Q
Sbjct: 68 VSNLQINIPIQAMVEDIKNQ 87
>gi|334347431|ref|XP_001370279.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 408
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRETGTLR----CPICR 81
E LTC C +++ P++LPCSHT C +CL I A+ LR CP CR
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYVRRALRIPLTCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ IP G+ +LP +F + +++ ++ + C H+ Q
Sbjct: 61 RTVEIPPPGIESLPINFALRAIIEKYQQEGCLDVITCPEHSRQ 103
>gi|321467874|gb|EFX78862.1| hypothetical protein DAPPUDRAFT_225352 [Daphnia pulex]
Length = 415
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
TCG C YD + PK+LPCSHT C C+ + +S L+CP+CR+
Sbjct: 14 TCGICFIKYDLLMNRPKVLPCSHTYCFTCIQAMISSGN----PLKCPMCRK 60
>gi|156363300|ref|XP_001625983.1| predicted protein [Nematostella vectensis]
gi|156212842|gb|EDO33883.1| predicted protein [Nematostella vectensis]
Length = 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 64 PADVPSLKVNFMINSIISVL 83
>gi|47222746|emb|CAG01713.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICREQITI 86
C C YD TPK L C+HT CL CLSR+ A + + + CP+CR T+
Sbjct: 31 CSICYTTYDNVFKTPKELDCTHTFCLECLSRLMALSPADQDSDHPLKHISCPLCRRTTTL 90
Query: 87 PRGGVAALPPSFLVN-QLLDLMSRQRRHIIP 116
P+ G PP+ N ++L + ++H P
Sbjct: 91 PKEG----PPALTTNHEVLRKLPHHQQHEEP 117
>gi|156360820|ref|XP_001625222.1| predicted protein [Nematostella vectensis]
gi|156212044|gb|EDO33122.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V++L +F++N ++ ++
Sbjct: 65 PADVSSLKVNFMINSIISVL 84
>gi|390350926|ref|XP_001189258.2| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like
[Strongylocentrotus purpuratus]
Length = 371
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + LRCP+CR + +P
Sbjct: 13 LECPVCLDTFTD----PKILSCSHTYCKTCLDNLLECHGNDQ-MLRCPVCRAETQVPNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V+ LP S + L++ M Q
Sbjct: 68 VSKLPASLALKSLIEDMKDQ 87
>gi|410899092|ref|XP_003963031.1| PREDICTED: RING finger protein 223-like [Takifugu rubripes]
Length = 231
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA------SQTRETGTLRCPICREQITI 86
C C +YD TPK+L C+HT CL CLSR+ A + + CP CR+ +
Sbjct: 31 CSICYNVYDNVFKTPKVLDCTHTFCLECLSRLMAVSPAGQDSDNPSNNISCPFCRQTTML 90
Query: 87 PRGGVAAL 94
P+ G AL
Sbjct: 91 PQEGPPAL 98
>gi|344288994|ref|XP_003416231.1| PREDICTED: tripartite motif-containing protein 59-like [Loxodonta
africana]
Length = 402
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 55 KCPSCRSIIEIASTGIESLPVNFALKAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|402861073|ref|XP_003894932.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Papio
anubis]
Length = 611
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 20 SINYEDFN-ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---- 74
IN E N E LTC C +++ P++LPCSHT C +CL I + +G
Sbjct: 204 EINKEMHNFEEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIW 255
Query: 75 ------LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 256 RPLRIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 311
>gi|440804160|gb|ELR25038.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 690
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 32/105 (30%)
Query: 32 TCGTCLCMYDGGE--HTPKLLPCSHTVCLHCLSRIAASQTRETGT--------------- 74
TC CL + E H P+LL C H+ C CL+R+ + T T +
Sbjct: 21 TCSVCLVAFSASEADHVPRLLKCGHSFCTSCLTRLLDATTPSTNSNSNSNSNSEAELEEA 80
Query: 75 ---LRCPICRE---------QITIPRGGVAALPPSFLVNQLLDLM 107
LRCP CR + P GV LP +F L+DL+
Sbjct: 81 TRPLRCPKCRTVTCVRLVDGEAAAPAAGVKGLPRNF---DLIDLL 122
>gi|402907112|ref|XP_003916322.1| PREDICTED: uncharacterized protein LOC101014275 [Papio anubis]
Length = 427
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI-P 87
S + C C+ +DG PK L C H CL CL+R++ + + CP+CR + P
Sbjct: 49 SPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAP 108
Query: 88 RGGVAALP 95
R G+ ALP
Sbjct: 109 RRGLPALP 116
>gi|156346082|ref|XP_001621433.1| hypothetical protein NEMVEDRAFT_v1g144926 [Nematostella vectensis]
gi|156207358|gb|EDO29333.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 64 PADVPSLKVNFMINSIISVL 83
>gi|326917700|ref|XP_003205134.1| PREDICTED: tripartite motif-containing protein 55-like isoform 2
[Meleagris gallopavo]
Length = 450
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
L MS++L S E ++ D E L C CL M+ +LPC H +C C S
Sbjct: 6 LGMSTSLGYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCAS 59
Query: 63 RI-----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-- 109
I + G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 60 DIFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES 119
Query: 110 ---QRRHIIPKCSTHNSQ 124
+R+ +P C H +
Sbjct: 120 TRPERKCDLPMCEEHEDE 137
>gi|410971065|ref|XP_003991994.1| PREDICTED: tripartite motif-containing protein 59 [Felis catus]
Length = 403
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|444517349|gb|ELV11510.1| Midline-1 [Tupaia chinensis]
Length = 635
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL ++D P LLPC+H++C +C RI A ++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFDD----PLLLPCAHSLCFNCAHRILVSHCATNEAVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|291233693|ref|XP_002736786.1| PREDICTED: tripartite motif protein-like, partial [Saccoglossus
kowalevskii]
Length = 739
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
N+ L C C +YD TPK LPC HT C+ CL+ +CP C+++ I
Sbjct: 15 NKVPLKCSLCKHVYDVTNRTPKYLPCLHTFCVLCLAGHVGK------IFQCPGCKQKNNI 68
Query: 87 PRGGVAALPPSFLV---NQLLDLMSRQRRHIIPKCST 120
P+ G+ +P +F NQLL + + +P C +
Sbjct: 69 PK-GIDLIPTNFAFLNYNQLLCHKDQIKHSKLPTCQS 104
>gi|156373711|ref|XP_001629454.1| predicted protein [Nematostella vectensis]
gi|156216455|gb|EDO37391.1| predicted protein [Nematostella vectensis]
Length = 163
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E + C CL +D P++LPC H+ C C++ +A ++ G + CP CR + +P
Sbjct: 2 EYIIKCPVCLETFD----DPRVLPCQHSFCKKCVTGVAKAR---RGLVVCPQCRRESWLP 54
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHII 115
R GV P + + + R+R H++
Sbjct: 55 RKGVKGYPSNIFIKNV-----RRRHHVL 77
>gi|260835097|ref|XP_002612546.1| hypothetical protein BRAFLDRAFT_75331 [Branchiostoma floridae]
gi|229297923|gb|EEN68555.1| hypothetical protein BRAFLDRAFT_75331 [Branchiostoma floridae]
Length = 343
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLR---CPICREQITIPRGGVAALPPSFLVNQL 103
PK LPC HT C CL+ +A G+LR CP+CR +++P GVA LP + + ++
Sbjct: 24 PKSLPCGHTFCEECLTELA-------GSLRDLCCPLCRRDVSLPVDGVAGLPTDYRLAKM 76
Query: 104 LDLMS 108
+ S
Sbjct: 77 SEKFS 81
>gi|195584776|ref|XP_002082180.1| GD11426 [Drosophila simulans]
gi|194194189|gb|EDX07765.1| GD11426 [Drosophila simulans]
Length = 1047
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|341891486|gb|EGT47421.1| hypothetical protein CAEBREN_04199 [Caenorhabditis brenneri]
Length = 368
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT------LRCPICREQI 84
+C C +D H PK+L C H++C CL R + A Q G CP CR+ +
Sbjct: 22 SCIICTEDFDSNAHVPKVLACGHSICFTCLDRMLNAIQVSYVGDGHCSTGFECPTCRQHM 81
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
IP P ++ QLL+ ++ Q
Sbjct: 82 QIPDNKAKGFPNNY---QLLESIAPQ 104
>gi|291239957|ref|XP_002739888.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 734
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ +++FL C C Y K+LPC H+ C HC+ ++ Q + CP+CR
Sbjct: 10 KEIDDNFLVCTVCSERY----RNAKILPCLHSFCEHCIDKLL--QKSGGKGIPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHI--IPKC 118
+P G +++ P+ VN+L+ L+ ++ + + KC
Sbjct: 64 HDLPEGA-SSVQPNVFVNELVVLLEKRYKETNDVQKC 99
>gi|156353437|ref|XP_001623072.1| predicted protein [Nematostella vectensis]
gi|156209727|gb|EDO30972.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 65 PADVPSLKVNFMINSIISVL 84
>gi|355746928|gb|EHH51542.1| hypothetical protein EGM_10939 [Macaca fascicularis]
Length = 403
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|301101459|ref|XP_002899818.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102820|gb|EEY60872.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 735
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 23 YEDFNESFLTCGTCLCMYDGGE----HTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
+ +F +S + C C YD + H P+LL C HT C CL A +TG L CP
Sbjct: 21 WSEFADSGVECELCNEPYDDDDSDEGHIPRLLTCGHTYCQSCLDGWATHTGSQTGELECP 80
Query: 79 ICREQITIP-RGGVAALPPSF 98
CR + G ALP ++
Sbjct: 81 TCRRVTRLEGSAGARALPKNY 101
>gi|417400295|gb|JAA47102.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 402
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 55 KCPNCRSSIEIAPTGIESLPVNFALRAIIEKYQQEDHPHIVTCPEHYRQ 103
>gi|335299840|ref|XP_003358702.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Sus
scrofa]
gi|335299842|ref|XP_001925596.3| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Sus
scrofa]
Length = 403
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL I + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLEDILQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|402861071|ref|XP_003894931.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Papio
anubis]
gi|383417701|gb|AFH32064.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417703|gb|AFH32065.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417705|gb|AFH32066.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 403
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|355559905|gb|EHH16633.1| hypothetical protein EGK_11948 [Macaca mulatta]
gi|380811990|gb|AFE77870.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 402
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|156352339|ref|XP_001622715.1| predicted protein [Nematostella vectensis]
gi|156209315|gb|EDO30615.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
V +L +F++N ++ ++
Sbjct: 65 PADVPSLKVNFMINSIISVL 84
>gi|341875587|gb|EGT31522.1| hypothetical protein CAEBREN_01649 [Caenorhabditis brenneri]
Length = 261
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 2 TLSMSSTLSTNSTLVETVSI--NYEDFNESFLTCGTCLCMYDGGE-HTPKLLPCSHTVCL 58
+L M TL +TV + N +D + +C CL Y E H P+ L C HTVC
Sbjct: 160 SLKMEQLEKDLDTLRKTVEVAANKDDQPFKWKSCEICLEQYSYEENHVPRFLSCGHTVCH 219
Query: 59 HCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
C R+ A +RCP R++ + LP ++ V
Sbjct: 220 GCTKRLEAP-----SGVRCPFDRQETKVDYAAGEQLPKNYAV 256
>gi|297672397|ref|XP_002814288.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Pongo
abelii]
Length = 403
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|390368536|ref|XP_003731468.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 337
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL +I ++ + L CP CRE+ ++P G
Sbjct: 13 LECPVCLKFFK----EPKILTCSHTFCKVCLEKILETRRK----LLCPTCREETSVPGGD 64
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V+ L + V L++ + Q
Sbjct: 65 VSRLQSNITVRSLVEYLETQ 84
>gi|260817098|ref|XP_002603424.1| hypothetical protein BRAFLDRAFT_222777 [Branchiostoma floridae]
gi|229288743|gb|EEN59435.1| hypothetical protein BRAFLDRAFT_222777 [Branchiostoma floridae]
Length = 86
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+L C H C CL + Q +T L CP CR +
Sbjct: 10 LSQDFLECQICLQPY----RQPKVLSCLHFFCQQCLEELLTKQKLKT-ELDCPTCRSKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLD 105
+P G VA L +F V L D
Sbjct: 65 LPGGVVAKLKDNFFVESLKD 84
>gi|390332992|ref|XP_003723616.1| PREDICTED: uncharacterized protein LOC100891554 [Strongylocentrotus
purpuratus]
Length = 792
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C+ PK L C HT C CL + + +G + CP+CRE T+ R G
Sbjct: 13 LVCAVCMNTL----KNPKSLSCRHTFCEECLKQCDKASQGRSGGITCPMCREVTTLSREG 68
Query: 91 VAALPPSFLVNQLLDLM 107
VA L + L+ ++L+++
Sbjct: 69 VAGLKSNPLIYRVLEVL 85
>gi|291239955|ref|XP_002739887.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 1046
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +E+FL C C Y K+LPC H+ C C+ ++ + + CP+CR
Sbjct: 10 EEIDENFLVCTVCSERY----RNAKILPCLHSFCEQCIDKLLEKSGGK--GIPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR--HIIPKC 118
+P G +++ P+ VN+L+ L+ ++ + + + KC
Sbjct: 64 HDLPEGA-SSVQPNIFVNELVVLLEKRDKETNYVQKC 99
>gi|156393704|ref|XP_001636467.1| predicted protein [Nematostella vectensis]
gi|156223571|gb|EDO44404.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
+S++ + NE L C CL D HT K+LPC HT C CL I A++ LRCP
Sbjct: 1 MSLDSVELNE-LLECSVCLERLD---HTSKVLPCQHTFCRRCLKEIQAAKKE----LRCP 52
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
CR + V LP + L+ ++L+ ++R+R
Sbjct: 53 ECR---ILVDQEVDELPSNILLVRILEGLNRKR 82
>gi|341878189|gb|EGT34124.1| hypothetical protein CAEBREN_00609 [Caenorhabditis brenneri]
Length = 316
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR-------CPICREQIT 85
C C YD H PK+L C+HT+C C++ + A R G + CP+CR
Sbjct: 21 CRICTVAYDDNRHLPKILQCAHTICNACINVLEAEGRRRAGNMDMTQVYIVCPVCRMLTQ 80
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHII 115
PR + ++ + ++D+M + H +
Sbjct: 81 APRNSIRT---NYQLIDVVDVMRGEANHNV 107
>gi|332214604|ref|XP_003256425.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Nomascus leucogenys]
gi|332214606|ref|XP_003256426.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Nomascus leucogenys]
gi|332214608|ref|XP_003256427.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Nomascus leucogenys]
gi|332214612|ref|XP_003256429.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Nomascus leucogenys]
gi|332214614|ref|XP_003256430.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Nomascus leucogenys]
gi|332214618|ref|XP_003256432.1| PREDICTED: tripartite motif-containing protein 59 isoform 8
[Nomascus leucogenys]
Length = 403
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|395511077|ref|XP_003759788.1| PREDICTED: tripartite motif-containing protein 55 [Sarcophilus
harrisii]
Length = 518
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDTLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +R+
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SEQPMCEEHEDE 130
>gi|306922560|gb|ADN07450.1| tripartite motif-containing 55, 5 prime [Microtus ochrogaster]
gi|306922565|gb|ADN07454.1| tripartite motif-containing 55, 5 prime [Microtus ochrogaster]
Length = 286
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H+ +
Sbjct: 119 SEQPMCEEHDEE 130
>gi|345806149|ref|XP_848385.2| PREDICTED: RING finger protein 224 [Canis lupus familiaris]
Length = 154
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HT C C+ ++ A E + CP CR+ PRGGVA
Sbjct: 23 CIICYSAYDLTGHLPRRLYCGHTFCQACVRQLDAP-AHEQRWIPCPQCRQSTPTPRGGVA 81
Query: 93 ALP---PSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L +FL + +SR+ + PK ST +Q
Sbjct: 82 MLDLDLAAFLAVKAEWELSREEPRVPPKGSTAITQ 116
>gi|405968424|gb|EKC33497.1| B-box type zinc finger protein ncl-1 [Crassostrea gigas]
Length = 939
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK+L C H C CL L C IC++ IP GG+AAL P ++++ LL++
Sbjct: 91 PKILNCLHVFCQTCLEN---ENEDAKDVLSCSICKQDTKIPPGGIAALQPEYVISDLLEI 147
Query: 107 MSRQRRHII 115
+ + + I+
Sbjct: 148 AAIEDKQIL 156
>gi|125817281|ref|XP_001333631.1| PREDICTED: RING finger protein 186 isoform 1 [Danio rerio]
gi|292614184|ref|XP_002662175.1| PREDICTED: RING finger protein 186 [Danio rerio]
gi|292614244|ref|XP_002662202.1| PREDICTED: RING finger protein 186-like [Danio rerio]
Length = 187
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ GE P+ L C HT C CL R+ + E + CP CR+ +PRGG
Sbjct: 54 LDCIVCYSAYNLGERLPRKLYCGHTFCQACLKRL-DTLINEQMWIPCPQCRQNTPVPRGG 112
Query: 91 VAAL 94
AL
Sbjct: 113 ATAL 116
>gi|268560772|ref|XP_002646287.1| Hypothetical protein CBG11992 [Caenorhabditis briggsae]
Length = 437
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT------LRCPICREQIT 85
C C+ +D H PK+L C HT C CL + I++ Q G CP+CR
Sbjct: 25 CSICMEEFDSNIHLPKVLKCGHTFCRSCLDKAISSVQVSHYGGGDVNTLFFCPLCRRSEE 84
Query: 86 IPRGGVAALPPSFLVNQLLDLMS 108
IP G + P + +QLLD+++
Sbjct: 85 IPNTGASDFPNN---HQLLDVVA 104
>gi|345796488|ref|XP_545257.3| PREDICTED: tripartite motif-containing protein 59 [Canis lupus
familiaris]
Length = 404
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|301614337|ref|XP_002936657.1| PREDICTED: hypothetical protein LOC100491611 [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 8 TLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS 67
++ S + ++++Y+++ C C +D PKLL C HT C CL+ +
Sbjct: 2 AVNQASGMGSDITLSYDEYE-----CKICYNYFDLDRRAPKLLECLHTFCQECLNTLHRR 56
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQR----RHIIPKCSTHNS 123
+ R L CP+CR + +P V ALP + V + L R + I+P + H
Sbjct: 57 EDRPW-RLSCPVCRHRTVVPDSRVDALPINTKVAEAFPLYVRPDDPFPQDILPPITYHQQ 115
Query: 124 Q 124
+
Sbjct: 116 R 116
>gi|379642601|ref|NP_001243831.1| tripartite motif-containing protein 59 [Equus caballus]
Length = 403
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQ 103
>gi|335774974|gb|AEH58418.1| tripartite motif-containing protein 59-like protein [Equus
caballus]
Length = 403
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQ 103
>gi|297278120|ref|XP_001102271.2| PREDICTED: hypothetical protein LOC713074 [Macaca mulatta]
Length = 457
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI-P 87
S + C C+ +DG PK L C H CL CL+R++ + + CP+CR + P
Sbjct: 49 SPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAP 108
Query: 88 RGGVAALP 95
R G+ ALP
Sbjct: 109 RRGLPALP 116
>gi|50344922|ref|NP_001002133.1| uncharacterized protein LOC415223 [Danio rerio]
gi|47939401|gb|AAH71428.1| Zgc:86757 [Danio rerio]
Length = 345
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 19 EKQLSCPICLDMFT---KPVVILPCQHNLCRSCASELYDSKNPYHFSGGIFRCPTCRFEV 75
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+ R GV L + LV ++D+ +Q
Sbjct: 76 VLDRHGVYGLQRNLLVENIIDIYKQQ 101
>gi|156360541|ref|XP_001625086.1| predicted protein [Nematostella vectensis]
gi|156211901|gb|EDO32986.1| predicted protein [Nematostella vectensis]
Length = 225
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C CL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCFHSFCRLCLEELAV-HSEGRGKLACPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLM 107
+ V +L +F++N +L ++
Sbjct: 65 QADVPSLKVNFMINSILSVL 84
>gi|17531269|ref|NP_494234.1| Protein B0281.8 [Caenorhabditis elegans]
gi|351065644|emb|CCD61638.1| Protein B0281.8 [Caenorhabditis elegans]
Length = 292
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C + G+H P+ L CSHT+C C+ ++ + G + CP CRE +P +
Sbjct: 9 CDDDFSSEEDGDHNPRNLKCSHTLCEGCIKKLLKN-----GRVVCPFCREPTEVPVYNIK 63
Query: 93 ALPPSFLVNQLLDLMS------RQRRHIIPKCSTH 121
+L +F + Q++ +++ + + PKC H
Sbjct: 64 SLHKNFSLIQMIKIVTKTTEVEKNWDNFPPKCVEH 98
>gi|72090160|ref|XP_789595.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 243
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL+ + + LRCPICR + +P
Sbjct: 13 LECPVCLNSFTD----PKILSCSHTYCKTCLNNLLECHGNDQ-MLRCPICRAETKVPNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V+ LP + + L+D + Q
Sbjct: 68 VSKLPANLALKSLIDDVRDQ 87
>gi|443692325|gb|ELT93942.1| hypothetical protein CAPTEDRAFT_89730, partial [Capitella teleta]
Length = 190
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQI 84
L C C YD +PK+L C+HT C CL ++ ++ G + CP CRE
Sbjct: 10 DLLHCMICFEQYD----SPKMLRCAHTFCAECLQGYYSTYQQQKRAVPGKIPCPTCRELT 65
Query: 85 TIPRGGVAALPPSFLVNQLLDLM 107
T+P GV+ L F V ++ ++
Sbjct: 66 TLPSNGVSGLRNDFKVQKIEEMF 88
>gi|410909946|ref|XP_003968451.1| PREDICTED: tripartite motif-containing protein 59-like [Takifugu
rubripes]
Length = 420
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C ++ P++LPCSHT C CL + + L+CP CR
Sbjct: 5 EEDLTCSVCYSLFS----DPRVLPCSHTFCKTCLDNLLQVSNNYSIWRPLRLPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ +P GV ALP + + +++ P C H+ Q
Sbjct: 61 SMVELPPTGVEALPSNVSLRAIIEKYQSDNEPRPPSCQEHHRQ 103
>gi|193203953|ref|NP_494232.2| Protein B0281.3 [Caenorhabditis elegans]
gi|351065646|emb|CCD61640.1| Protein B0281.3 [Caenorhabditis elegans]
Length = 329
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 41 DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
+ G+H+P+ L C HT+C C+ ++ + CP CRE +P + +L +F +
Sbjct: 16 EDGDHSPRNLKCCHTLCEGCIKKLL-----NYSRIVCPFCREPTEVPGNNIKSLHKNFSL 70
Query: 101 NQLLD--LMSRQRRHIIPKCSTH 121
Q++ L+ IIPKC H
Sbjct: 71 IQVIKTTLVEEAEARIIPKCKAH 93
>gi|149508462|ref|XP_001506468.1| PREDICTED: E3 ubiquitin-protein ligase RNF152-like [Ornithorhynchus
anatinus]
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
GV LPP F V+QL D IP S H KL
Sbjct: 56 ---GVTRLPPGFSVSQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|260826193|ref|XP_002608050.1| hypothetical protein BRAFLDRAFT_74999 [Branchiostoma floridae]
gi|229293400|gb|EEN64060.1| hypothetical protein BRAFLDRAFT_74999 [Branchiostoma floridae]
Length = 585
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCS--HTVCLHCLSRIAASQTRETGTLRCPICREQ 83
F + L+CG C + PK++PC H+ C HCL + A +Q RCP CR+
Sbjct: 14 FIQEELSCGICHELLT----RPKVVPCKGKHSFCQHCLEKWATTQQ----PFRCPTCRQP 65
Query: 84 ITIPRGGVAALP--PSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+P GV +LP +VN L ++ + CS H+ +
Sbjct: 66 ANLPAKGVPSLPDCDRRIVNLCDQLRNQGVSELNYCCSVHDDE 108
>gi|345306794|ref|XP_001511947.2| PREDICTED: tripartite motif-containing protein 55 [Ornithorhynchus
anatinus]
Length = 603
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +R+
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|156351085|ref|XP_001622356.1| predicted protein [Nematostella vectensis]
gi|156208871|gb|EDO30256.1| predicted protein [Nematostella vectensis]
Length = 621
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
S +TC CL Y P++L C HT C HCL + ++E T+ CP CRE+I I
Sbjct: 12 SDVTCSLCLGQY----QDPRVLACLHTYCRHCLESLV-EHSKEC-TVSCPQCREKIEISV 65
Query: 89 GGVAALPPSFLVNQLLDLMS 108
V +L F++ L++ MS
Sbjct: 66 EEVKSLKVDFMLIDLIEKMS 85
>gi|395510881|ref|XP_003759696.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Sarcophilus
harrisii]
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|126320895|ref|XP_001365065.1| PREDICTED: e3 ubiquitin-protein ligase RNF152-like [Monodelphis
domestica]
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDSLLECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|148237928|ref|NP_001091169.1| uncharacterized protein LOC100036929 [Xenopus laevis]
gi|120538076|gb|AAI29679.1| LOC100036929 protein [Xenopus laevis]
Length = 498
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 22/136 (16%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLQYKSFSKEQQTM---DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCASDI 54
Query: 65 -AASQT----------RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
AS T G RCP CR ++ + R GV L + LV ++DL +
Sbjct: 55 FQASNTYLPTRGGNTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDLYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQ 124
+R+ P C H +
Sbjct: 115 PERKTDQPMCDEHEDE 130
>gi|260808476|ref|XP_002599033.1| hypothetical protein BRAFLDRAFT_104271 [Branchiostoma floridae]
gi|229284309|gb|EEN55045.1| hypothetical protein BRAFLDRAFT_104271 [Branchiostoma floridae]
Length = 405
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+L C HT C CL ++ Q + L CP CR + +
Sbjct: 14 SDDFLECKVCLEPY----RRPKVLSCLHTFCQECLEQLHKRQG-DAQHLECPTCRTKTEL 68
Query: 87 P-RGGVAALPPSFLVNQLLD 105
P + GV AL +F V L D
Sbjct: 69 PGKSGVTALKDNFFVESLAD 88
>gi|13879442|gb|AAH06700.1| Tripartite motif-containing 59 [Mus musculus]
gi|19343567|gb|AAH25430.1| Tripartite motif-containing 59 [Mus musculus]
Length = 403
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL + + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I I G+ +LP +F + +++ ++ + C H Q
Sbjct: 57 PNCRSIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQ 103
>gi|355726134|gb|AES08775.1| tripartite motif-containing 59 [Mustela putorius furo]
Length = 320
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|395849335|ref|XP_003797284.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Otolemur garnettii]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPVCEEHEEE 130
>gi|296226602|ref|XP_002759000.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Callithrix jacchus]
Length = 450
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|291400092|ref|XP_002716385.1| PREDICTED: tripartite motif-containing 59 [Oryctolagus cuniculus]
Length = 403
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCKNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALMAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|260792770|ref|XP_002591387.1| hypothetical protein BRAFLDRAFT_86894 [Branchiostoma floridae]
gi|229276592|gb|EEN47398.1| hypothetical protein BRAFLDRAFT_86894 [Branchiostoma floridae]
Length = 151
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A + +CP CR + +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGRSFQCPNCRLKFKLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + LV L + + Q
Sbjct: 68 VAGLPNNHLVTSLCERLQNQ 87
>gi|296226600|ref|XP_002758999.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Callithrix jacchus]
Length = 538
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|156397370|ref|XP_001637864.1| predicted protein [Nematostella vectensis]
gi|156224980|gb|EDO45801.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N E+ + + C CL + P++LPC HT C CL +A S+ + G CP C+
Sbjct: 5 NIEERLQKEVECPICLERFKD----PRVLPCLHTFCYECLVGLA-SRYKTEGKWPCPQCK 59
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
+ + V++L +FL+N LL +++ + P C SQ
Sbjct: 60 MVVQVSPAEVSSLKVNFLMNTLLSVVTNDSKSAKPHCQMCTSQ 102
>gi|432095109|gb|ELK26492.1| Tripartite motif-containing protein 55 [Myotis davidii]
Length = 351
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P+C H +
Sbjct: 119 SDQPRCEEHEEE 130
>gi|348588737|ref|XP_003480121.1| PREDICTED: tripartite motif-containing protein 55-like isoform 2
[Cavia porcellus]
Length = 446
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|327269785|ref|XP_003219673.1| PREDICTED: tripartite motif-containing protein 55-like [Anolis
carolinensis]
Length = 533
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 30/134 (22%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQETMDNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-------Q 110
+ G RCP CR ++ + R GV L + LV ++D+ + +
Sbjct: 59 NPYLPMRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESASCRPE 118
Query: 111 RRHIIPKCSTHNSQ 124
R+ P C H +
Sbjct: 119 RKPEQPMCEEHEDE 132
>gi|115903672|ref|XP_787320.2| PREDICTED: uncharacterized protein LOC582268 [Strongylocentrotus
purpuratus]
Length = 316
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 48 KLLPCSHTVCLHCLSRIA-ASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
+ LPC HT C CL+R AS R G+++C C + +P GGV LP F +N L+D
Sbjct: 15 RSLPCGHTYCKGCLTRSTFASYPRPRGSIQCAECMKTTQLPSGGVEGLPRCFAINSLVD 73
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 17 ETVSINYEDF--NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET-G 73
E +S+ F E+F +C CL + + LPC H C CL Q R T G
Sbjct: 99 EELSLGRHGFQVKETF-SCVFCLNLM----RDARYLPCGHPFCRECLK----MQPRTTPG 149
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLL 104
++C C++ +P G+ LP ++ +N ++
Sbjct: 150 GIKCSKCQKVHNLPAQGIDGLPVAYRINSIV 180
>gi|170295836|ref|NP_080139.3| tripartite motif-containing protein 59 [Mus musculus]
gi|342187077|sp|Q922Y2.2|TRI59_MOUSE RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 1
Length = 403
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I I G+ +LP +F + +++ ++ + C H Q
Sbjct: 61 SIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQ 103
>gi|47222745|emb|CAG01712.1| unnamed protein product [Tetraodon nigroviridis]
Length = 398
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICREQITI 86
C C YD TPK L C+HT CL CLSR+ A + + + CP+CR T+
Sbjct: 31 CSICYTTYDNVFKTPKELDCTHTFCLECLSRLMALSPADQDSDHPLKHISCPLCRRTTTL 90
Query: 87 PRGGVAAL 94
P+ G AL
Sbjct: 91 PKEGPPAL 98
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICREQITI 86
C C YD TPK L C+HT CL CLSR+ A + + + CP CR T+
Sbjct: 199 CSICYTTYDNVFKTPKELDCTHTFCLECLSRLMALSPADQDSGHPPKHISCPFCRRTTTL 258
Query: 87 PRGGVAAL 94
P+ G AL
Sbjct: 259 PQEGPPAL 266
>gi|403288827|ref|XP_003935584.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Saimiri boliviensis boliviensis]
Length = 443
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|12275916|gb|AAG50192.1|AF230977_1 tripartite motif protein TRIM18 beta [Homo sapiens]
gi|119619186|gb|EAW98780.1| midline 1 (Opitz/BBB syndrome), isoform CRA_b [Homo sapiens]
gi|189054709|dbj|BAG37559.1| unnamed protein product [Homo sapiens]
Length = 552
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|118344162|ref|NP_001071903.1| zinc finger protein [Ciona intestinalis]
gi|92081480|dbj|BAE93287.1| zinc finger protein [Ciona intestinalis]
Length = 585
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 24 EDFNESFLTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+++ S L CG C + GE P+LL C H+ C CL+R+ + TL CP+ R+
Sbjct: 23 DNWATSVLECGVCGEQFSLSGEKVPRLLLCGHSFCHDCLTRLPV----QAHTLVCPMDRQ 78
Query: 83 QITIPRGGVAALPPSFLVNQLLD 105
+ GGV L +F + +L++
Sbjct: 79 ITDVGSGGVWGLKKNFALIELME 101
>gi|296222774|ref|XP_002757300.1| PREDICTED: E3 ubiquitin-protein ligase RNF152-like [Callithrix
jacchus]
Length = 203
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 16 VETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL 75
+ETVS +S L C C Y PKLL C HT C CL ++ SQ +
Sbjct: 1 METVS------QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DV 49
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
RCP CR GV LPP F V+QL D IP S H KL
Sbjct: 50 RCPWCR--------GVTKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|426342715|ref|XP_004037980.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Gorilla gorilla gorilla]
Length = 431
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 19/116 (16%)
Query: 20 SINYEDFN-ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---- 74
IN E N E LTC C +++ P++LPCSHT C +CL I + +G
Sbjct: 24 EINKEMHNFEEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIW 75
Query: 75 ------LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I GV +LP +F + +++ ++ I C H Q
Sbjct: 76 RPLRIPLKCPNCRSITEIAPTGVESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 131
>gi|55742208|ref|NP_001006876.1| midline 1 (Opitz/BBB syndrome) [Xenopus (Silurana) tropicalis]
gi|49899992|gb|AAH76998.1| midline 1 (Opitz/BBB syndrome) [Xenopus (Silurana) tropicalis]
Length = 668
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCANNESVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSKRGLEGLKRNVTLQNIIDRFQK 88
>gi|344283041|ref|XP_003413281.1| PREDICTED: RING finger protein 223-like [Loxodonta africana]
Length = 253
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+ A+Q + + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLTAAQPIGRPGSEGVPCPFCRQPTA 106
Query: 86 IPRGGVAALPPSFLVNQLLDLMS---RQRRHII 115
+P G AL QLL M R+ H+
Sbjct: 107 VPPDGAPAL---RTSRQLLAKMPAHLRREEHVW 136
>gi|395849337|ref|XP_003797285.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Otolemur garnettii]
Length = 539
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPVCEEHEEE 130
>gi|300116147|ref|NP_001177812.1| midline 1 (Opitz/BBB syndrome) [Xenopus laevis]
gi|298359661|gb|ADI77436.1| midline 1 [Xenopus laevis]
Length = 668
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCANNESVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSKRGLEGLKRNVTLQNIIDRFQK 88
>gi|432959686|ref|XP_004086363.1| PREDICTED: RING finger protein 223-like [Oryzias latipes]
Length = 224
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI----AASQTRETG--TLRCPICREQI 84
L C C YD TPKLL C+HT CL CLSR+ + G L CP CR
Sbjct: 22 LECSICYNTYDNVFKTPKLLECTHTFCLECLSRLMTFTPVDRDGNGGGKQLSCPFCRHPT 81
Query: 85 TIPRGGVAALPPSFLV 100
+P+ G AL S V
Sbjct: 82 ILPQNGPPALATSHEV 97
>gi|301618670|ref|XP_002938721.1| PREDICTED: hypothetical protein LOC100487311 [Xenopus (Silurana)
tropicalis]
Length = 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI-PRGGV 91
C C YD H PK L C H CL CLSRI T+ TL CPICR ++ P+ G
Sbjct: 18 CIICFTPYDSLFHLPKTLSCKHIFCLECLSRITVGSTQPE-TLSCPICRLPTSLPPKKGP 76
Query: 92 AAL 94
AL
Sbjct: 77 PAL 79
>gi|291388056|ref|XP_002710490.1| PREDICTED: tripartite motif-containing 55 isoform 1 [Oryctolagus
cuniculus]
Length = 549
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|3462503|gb|AAC32998.1| midline 1 cerebellar isoform 1 [Homo sapiens]
Length = 484
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|291388058|ref|XP_002710491.1| PREDICTED: tripartite motif-containing 55 isoform 2 [Oryctolagus
cuniculus]
Length = 453
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|292617847|ref|XP_002663478.1| PREDICTED: midline-1 [Danio rerio]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-------TRETGTLRCPIC 80
ES LTC CL +++ P LLPC+H++C HC RI S ++ +CP C
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFHCAHRILTSHCAAFDESSKPPSAFQCPTC 60
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSR 109
R IT+ + G+ L + + +++ +
Sbjct: 61 RYVITLDQQGLDGLKRNVTLQNIIERFQK 89
>gi|403288829|ref|XP_003935585.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Saimiri boliviensis boliviensis]
Length = 539
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|395849333|ref|XP_003797283.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Otolemur garnettii]
Length = 547
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPVCEEHEEE 130
>gi|260826253|ref|XP_002608080.1| hypothetical protein BRAFLDRAFT_91442 [Branchiostoma floridae]
gi|229293430|gb|EEN64090.1| hypothetical protein BRAFLDRAFT_91442 [Branchiostoma floridae]
Length = 401
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKL-LPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL + G PK+ LPC HT CL + Q +E CP CR +
Sbjct: 11 SDDFLECTICLEPFKG----PKVGLPCLHTFYKGCLEKCVTQQGKEQ--FPCPTCRSETV 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
+P GGV +F V L D + R + ++ K
Sbjct: 65 LPEGGVTGFKDNFFVVSLSDTI-RSHKSLLSK 95
>gi|156384841|ref|XP_001633341.1| predicted protein [Nematostella vectensis]
gi|156220409|gb|EDO41278.1| predicted protein [Nematostella vectensis]
Length = 576
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 33 CGTCLCMYDGGEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
C C+ +++ PK LP C+H VC CL +I A + + CPICR + IP+ GV
Sbjct: 22 CPVCIEVFE----EPKSLPSCAHNVCRECLEKITARNSSRF--VECPICRARSEIPQNGV 75
Query: 92 AALPPSFLVNQLLD 105
+ P + L+ ++++
Sbjct: 76 NSFPTNTLLVRIIE 89
>gi|72027903|ref|XP_795379.1| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like
[Strongylocentrotus purpuratus]
Length = 313
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + LRCP+CR + +P
Sbjct: 13 LECPVCLNTFTD----PKILSCSHTYCKACLDNLLECHGNDQ-MLRCPVCRAETQVPNRE 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR 112
V+ LP S + L++ M Q +
Sbjct: 68 VSKLPASQALKSLIEDMKSQHQ 89
>gi|332860247|ref|XP_001141973.2| PREDICTED: midline-1 isoform 2 [Pan troglodytes]
Length = 451
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|345806736|ref|XP_003435491.1| PREDICTED: midline-1 [Canis lupus familiaris]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|403255241|ref|XP_003920350.1| PREDICTED: midline-1 isoform 5 [Saimiri boliviensis boliviensis]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|300797197|ref|NP_001180209.1| midline-1 isoform 5 [Homo sapiens]
Length = 451
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|395840501|ref|XP_003793095.1| PREDICTED: midline-1 isoform 4 [Otolemur garnettii]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|390359851|ref|XP_003729576.1| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 132
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + S+ G L CP CRE+ ++P G
Sbjct: 26 LECPVCLSFFK----EPKILTCSHTFCKACLETLLESR----GELLCPTCREETSVPGGD 77
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V L + V L++ + Q
Sbjct: 78 VGRLQSNITVRSLVEDVETQ 97
>gi|338729163|ref|XP_003365837.1| PREDICTED: midline-1 [Equus caballus]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|327263122|ref|XP_003216370.1| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Anolis
carolinensis]
Length = 578
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 33 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AVRCPFDRQVTELGDS 88
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQI 125
GV L +F LL+L+ R + ++ +C ++ I
Sbjct: 89 GVWGLKKNF---ALLELLERLQNGLVGQCGSNEDSI 121
>gi|426256648|ref|XP_004021949.1| PREDICTED: midline-1 isoform 2 [Ovis aries]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|426256646|ref|XP_004021948.1| PREDICTED: midline-1 isoform 1 [Ovis aries]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|410988066|ref|XP_004000309.1| PREDICTED: midline-1 isoform 2 [Felis catus]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|332223793|ref|XP_003261052.1| PREDICTED: midline-1 isoform 1 [Nomascus leucogenys]
gi|332223795|ref|XP_003261053.1| PREDICTED: midline-1 isoform 2 [Nomascus leucogenys]
gi|332223797|ref|XP_003261054.1| PREDICTED: midline-1 isoform 3 [Nomascus leucogenys]
gi|332223799|ref|XP_003261055.1| PREDICTED: midline-1 isoform 4 [Nomascus leucogenys]
gi|441673044|ref|XP_004092405.1| PREDICTED: midline-1 [Nomascus leucogenys]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|221042530|dbj|BAH12942.1| unnamed protein product [Homo sapiens]
Length = 395
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|260794748|ref|XP_002592369.1| hypothetical protein BRAFLDRAFT_106229 [Branchiostoma floridae]
gi|229277588|gb|EEN48380.1| hypothetical protein BRAFLDRAFT_106229 [Branchiostoma floridae]
Length = 565
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ FL CG CL + PK+LPC+HT C CL A + + CP CR +
Sbjct: 17 QEFLVCGICLDHFT----LPKILPCAHTFCQACLETYAGRRR----FIYCPNCRRVAELD 68
Query: 88 RG-GVAALPPSFLVNQLLDLMSRQ 110
GV LP +F V L D+++ +
Sbjct: 69 SASGVRGLPGNFWVTNLRDVIAER 92
>gi|300796661|ref|NP_001179751.1| midline-1 [Bos taurus]
gi|296470444|tpg|DAA12559.1| TPA: midline 1 (Opitz/BBB syndrome) isoform 1 [Bos taurus]
gi|296470445|tpg|DAA12560.1| TPA: midline 1 (Opitz/BBB syndrome) isoform 2 [Bos taurus]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|114620337|ref|XP_001160624.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Pan
troglodytes]
gi|397522752|ref|XP_003831419.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Pan
paniscus]
Length = 540
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|4557753|ref|NP_000372.1| midline-1 isoform 1 [Homo sapiens]
gi|15451852|ref|NP_150632.1| midline-1 isoform 1 [Homo sapiens]
gi|148833499|ref|NP_001092094.1| midline-1 isoform 1 [Homo sapiens]
gi|300797132|ref|NP_001180206.1| midline-1 isoform 1 [Homo sapiens]
gi|397481510|ref|XP_003811986.1| PREDICTED: midline-1 isoform 1 [Pan paniscus]
gi|397481512|ref|XP_003811987.1| PREDICTED: midline-1 isoform 2 [Pan paniscus]
gi|397481514|ref|XP_003811988.1| PREDICTED: midline-1 isoform 3 [Pan paniscus]
gi|397481516|ref|XP_003811989.1| PREDICTED: midline-1 isoform 4 [Pan paniscus]
gi|397481520|ref|XP_003811991.1| PREDICTED: midline-1 isoform 6 [Pan paniscus]
gi|22653810|sp|O15344.1|TRI18_HUMAN RecName: Full=Midline-1; AltName: Full=Midin; AltName: Full=Midline
1 RING finger protein; AltName: Full=Putative
transcription factor XPRF; AltName: Full=RING finger
protein 59; AltName: Full=Tripartite motif-containing
protein 18
gi|11228709|gb|AAG33130.1|AF269101_1 midline 1 [Homo sapiens]
gi|12275914|gb|AAG50191.1|AF230976_1 tripartite motif protein TRIM18 alpha [Homo sapiens]
gi|2612793|emb|CAA74018.1| putative transcription factor XPRF [Homo sapiens]
gi|2827994|gb|AAB99951.1| ring finger protein [Homo sapiens]
gi|3462507|gb|AAC33000.1| midline 1 fetal kidney isoform 1 [Homo sapiens]
gi|3462509|gb|AAC33001.1| midline 1 fetal kidney isoform 2 [Homo sapiens]
gi|31565478|gb|AAH53626.1| Midline 1 (Opitz/BBB syndrome) [Homo sapiens]
gi|119619185|gb|EAW98779.1| midline 1 (Opitz/BBB syndrome), isoform CRA_a [Homo sapiens]
gi|119619187|gb|EAW98781.1| midline 1 (Opitz/BBB syndrome), isoform CRA_a [Homo sapiens]
gi|167773209|gb|ABZ92039.1| midline 1 (Opitz/BBB syndrome) [synthetic construct]
gi|355704611|gb|EHH30536.1| Midline-1 [Macaca mulatta]
gi|355757178|gb|EHH60703.1| Midline-1 [Macaca fascicularis]
gi|410227084|gb|JAA10761.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410264674|gb|JAA20303.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410301582|gb|JAA29391.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410301584|gb|JAA29392.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410340361|gb|JAA39127.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|348588735|ref|XP_003480120.1| PREDICTED: tripartite motif-containing protein 55-like isoform 1
[Cavia porcellus]
Length = 542
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|332251433|ref|XP_003274850.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Nomascus leucogenys]
Length = 539
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|332223801|ref|XP_003261056.1| PREDICTED: midline-1 isoform 5 [Nomascus leucogenys]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|296226598|ref|XP_002758998.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Callithrix jacchus]
Length = 546
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|300797111|ref|NP_150631.1| midline-1 isoform 2 [Homo sapiens]
gi|390479519|ref|XP_002807914.2| PREDICTED: midline-1 [Callithrix jacchus]
gi|397481518|ref|XP_003811990.1| PREDICTED: midline-1 isoform 5 [Pan paniscus]
gi|168275800|dbj|BAG10620.1| midline-1 [synthetic construct]
gi|410227082|gb|JAA10760.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410301586|gb|JAA29393.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|410988064|ref|XP_004000308.1| PREDICTED: midline-1 isoform 1 [Felis catus]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|410987221|ref|XP_003999903.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Felis
catus]
Length = 458
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|308473648|ref|XP_003099048.1| hypothetical protein CRE_26724 [Caenorhabditis remanei]
gi|308267851|gb|EFP11804.1| hypothetical protein CRE_26724 [Caenorhabditis remanei]
Length = 559
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 1 MTLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMY-DGGEHTPKLLPCSHTVCLH 59
M +S+S + E + + L+C CL Y + G TP++L C HT+CL
Sbjct: 158 MAISLSKKEFEEAIAKEQQKTREQQKKKETLSCNICLLKYGEEGNRTPRVLDCGHTLCLG 217
Query: 60 CLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFL 99
C +IA ++CP CR + V+ LP ++L
Sbjct: 218 CCKQIA-----RLAQIQCPFCRVVTHLTGRTVSNLPKNYL 252
>gi|300797175|ref|NP_001180208.1| midline-1 isoform 4 [Homo sapiens]
Length = 489
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|300797153|ref|NP_001180207.1| midline-1 isoform 3 [Homo sapiens]
Length = 540
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|149744233|ref|XP_001488148.1| PREDICTED: midline-1 isoform 1 [Equus caballus]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|402878382|ref|XP_003902865.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Papio
anubis]
Length = 540
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|390345918|ref|XP_001197514.2| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + LRCP+CR + +P
Sbjct: 13 LECPVCLNTFTD----PKILSCSHTYCKTCLDNLLECHGNDQ-MLRCPVCRAETQVPNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V+ LP + + L+D + Q
Sbjct: 68 VSKLPANLALKSLIDDVKNQ 87
>gi|260815329|ref|XP_002602426.1| hypothetical protein BRAFLDRAFT_274964 [Branchiostoma floridae]
gi|229287735|gb|EEN58438.1| hypothetical protein BRAFLDRAFT_274964 [Branchiostoma floridae]
Length = 151
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKL-LPCSHTVCLHCL-----SRIAASQTRETGTLRCP 78
D E LTC CL M++ P L LPC H +C C SR S G RCP
Sbjct: 2 DNLERQLTCPICLEMFN----KPVLILPCQHNLCRKCANDVFQSRGTPSVVGSGGRFRCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
CR ++ + R GV L + LV ++D+ ++
Sbjct: 58 TCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE 89
>gi|345793078|ref|XP_003433708.1| PREDICTED: tripartite motif-containing protein 55 [Canis lupus
familiaris]
Length = 454
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|403255233|ref|XP_003920346.1| PREDICTED: midline-1 isoform 1 [Saimiri boliviensis boliviensis]
gi|403255235|ref|XP_003920347.1| PREDICTED: midline-1 isoform 2 [Saimiri boliviensis boliviensis]
gi|403255237|ref|XP_003920348.1| PREDICTED: midline-1 isoform 3 [Saimiri boliviensis boliviensis]
gi|403255239|ref|XP_003920349.1| PREDICTED: midline-1 isoform 4 [Saimiri boliviensis boliviensis]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|311275912|ref|XP_003134970.1| PREDICTED: midline-1 [Sus scrofa]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|194386252|dbj|BAG59690.1| unnamed protein product [Homo sapiens]
Length = 617
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|149721363|ref|XP_001494962.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Equus
caballus]
Length = 453
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|74006447|ref|XP_548857.2| PREDICTED: midline-1 isoform 2 [Canis lupus familiaris]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|410897407|ref|XP_003962190.1| PREDICTED: tripartite motif-containing protein 54-like [Takifugu
rubripes]
Length = 357
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLDMF---TKPVVILPCQHNLCRSCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ R GV L + LV ++D+ +Q+
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQE 104
>gi|301761994|ref|XP_002916416.1| PREDICTED: tripartite motif-containing protein 55-like isoform 2
[Ailuropoda melanoleuca]
Length = 446
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|395840495|ref|XP_003793092.1| PREDICTED: midline-1 isoform 1 [Otolemur garnettii]
gi|395840497|ref|XP_003793093.1| PREDICTED: midline-1 isoform 2 [Otolemur garnettii]
gi|395840499|ref|XP_003793094.1| PREDICTED: midline-1 isoform 3 [Otolemur garnettii]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|332251429|ref|XP_003274848.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Nomascus leucogenys]
Length = 451
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|402878378|ref|XP_003902863.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Papio
anubis]
Length = 452
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|109129890|ref|XP_001093390.1| PREDICTED: midline-1-like isoform 6 [Macaca mulatta]
gi|109129892|ref|XP_001093502.1| PREDICTED: midline-1-like isoform 7 [Macaca mulatta]
gi|109129894|ref|XP_001093623.1| PREDICTED: midline-1-like isoform 8 [Macaca mulatta]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|34878844|ref|NP_908974.1| tripartite motif-containing protein 55 isoform 3 [Homo sapiens]
gi|33871582|gb|AAH07750.2| Tripartite motif-containing 55 [Homo sapiens]
gi|119607301|gb|EAW86895.1| tripartite motif-containing 55, isoform CRA_c [Homo sapiens]
gi|193787126|dbj|BAG52332.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|301609790|ref|XP_002934452.1| PREDICTED: RING finger protein 152-like [Xenopus (Silurana)
tropicalis]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ ASQ LRCP CR
Sbjct: 6 QDSLLECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRASQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLD 105
GV LPP + V+QL D
Sbjct: 56 ---GVTKLPPGYSVSQLPD 71
>gi|158255866|dbj|BAF83904.1| unnamed protein product [Homo sapiens]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|440893492|gb|ELR46231.1| Midline-1, partial [Bos grunniens mutus]
Length = 702
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 11 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 66
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 67 HVITLSQRGLDGLKRNVTLQNIIDRFQK 94
>gi|321471269|gb|EFX82242.1| hypothetical protein DAPPUDRAFT_316917 [Daphnia pulex]
Length = 350
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL-RCPICREQITI 86
E F+ CG C C +D PK L C+HTVCL CL + + G L CP CR+ I
Sbjct: 11 EHFVNCGVCFCEFDEEIRKPKFLQCAHTVCLKCLQEM----FQVVGCLITCPFCRKTFYI 66
>gi|426359813|ref|XP_004047156.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Gorilla gorilla gorilla]
Length = 540
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|426359809|ref|XP_004047154.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Gorilla gorilla gorilla]
Length = 452
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|27734873|ref|NP_775828.1| E3 ubiquitin-protein ligase RNF152 [Homo sapiens]
gi|55647521|ref|XP_523948.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 2 [Pan
troglodytes]
gi|114673375|ref|XP_001143948.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 1 [Pan
troglodytes]
gi|297702711|ref|XP_002828313.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 1 [Pongo
abelii]
gi|332849994|ref|XP_003315968.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Pan troglodytes]
gi|395749942|ref|XP_003779036.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 2 [Pongo
abelii]
gi|397514046|ref|XP_003827313.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Pan paniscus]
gi|426386121|ref|XP_004059540.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 1 [Gorilla
gorilla gorilla]
gi|426386123|ref|XP_004059541.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 2 [Gorilla
gorilla gorilla]
gi|426386125|ref|XP_004059542.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 3 [Gorilla
gorilla gorilla]
gi|41017760|sp|Q8N8N0.1|RN152_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF152; AltName:
Full=RING finger protein 152
gi|21756007|dbj|BAC04805.1| unnamed protein product [Homo sapiens]
gi|62739669|gb|AAH94004.1| Ring finger protein 152 [Homo sapiens]
gi|85566994|gb|AAI11957.1| Ring finger protein 152 [Homo sapiens]
gi|119583518|gb|EAW63114.1| ring finger protein 152, isoform CRA_a [Homo sapiens]
gi|208968731|dbj|BAG74204.1| ring finger protein 152 [synthetic construct]
gi|410212112|gb|JAA03275.1| ring finger protein 152 [Pan troglodytes]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
GV LPP F V+QL D IP S H KL
Sbjct: 56 ---GVTKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|302564147|ref|NP_001180763.1| RING finger protein 152 [Macaca mulatta]
gi|109122328|ref|XP_001088933.1| PREDICTED: RING finger protein 152-like isoform 2 [Macaca mulatta]
gi|297275403|ref|XP_002801001.1| PREDICTED: RING finger protein 152-like [Macaca mulatta]
gi|332230324|ref|XP_003264340.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 1 [Nomascus
leucogenys]
gi|332230326|ref|XP_003264341.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 2 [Nomascus
leucogenys]
gi|332230328|ref|XP_003264342.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 3 [Nomascus
leucogenys]
gi|402903258|ref|XP_003914491.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 1 [Papio
anubis]
gi|402903260|ref|XP_003914492.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 2 [Papio
anubis]
gi|402903262|ref|XP_003914493.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 isoform 3 [Papio
anubis]
gi|355701980|gb|EHH29333.1| RING finger protein 152 [Macaca mulatta]
gi|355755070|gb|EHH58937.1| RING finger protein 152 [Macaca fascicularis]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
GV LPP F V+QL D IP S H KL
Sbjct: 56 ---GVTKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|34878821|ref|NP_149047.2| tripartite motif-containing protein 55 isoform 2 [Homo sapiens]
gi|119607299|gb|EAW86893.1| tripartite motif-containing 55, isoform CRA_a [Homo sapiens]
Length = 540
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|24939889|emb|CAD24432.1| RING finger protein 29 [Homo sapiens]
Length = 540
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|395526989|ref|XP_003765636.1| PREDICTED: midline-1 isoform 2 [Sarcophilus harrisii]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQK 88
>gi|344273129|ref|XP_003408379.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Loxodonta africana]
Length = 443
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPIRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|354500023|ref|XP_003512102.1| PREDICTED: tripartite motif-containing protein 59 [Cricetulus
griseus]
gi|344258459|gb|EGW14563.1| Tripartite motif-containing protein 59 [Cricetulus griseus]
Length = 403
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I I G+ +LP +F + +++ ++ + C H Q
Sbjct: 61 SIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQ 103
>gi|301758531|ref|XP_002915112.1| PREDICTED: LOW QUALITY PROTEIN: midline-1-like [Ailuropoda
melanoleuca]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|149721142|ref|XP_001489983.1| PREDICTED: e3 ubiquitin-protein ligase RNF152-like [Equus caballus]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|114620341|ref|XP_519791.2| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Pan
troglodytes]
gi|397522748|ref|XP_003831417.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Pan
paniscus]
gi|410341959|gb|JAA39926.1| tripartite motif containing 55 [Pan troglodytes]
Length = 452
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|14588846|emb|CAC43019.1| RING finger protein 29 [Homo sapiens]
Length = 452
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVGNIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|395526987|ref|XP_003765635.1| PREDICTED: midline-1 isoform 1 [Sarcophilus harrisii]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQK 88
>gi|334346775|ref|XP_003341852.1| PREDICTED: midline-1 isoform 2 [Monodelphis domestica]
Length = 629
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQK 88
>gi|296480609|tpg|DAA22724.1| TPA: tripartite motif-containing 55 isoform 2 [Bos taurus]
Length = 449
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|327278537|ref|XP_003224018.1| PREDICTED: tripartite motif-containing protein 54-like [Anolis
carolinensis]
Length = 382
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLL--PCSHTVCLHCLSRIAASQ--TRETGTLRCPICREQITI 86
L+C CL ++ TP +L C+H C CL +I A Q + G CP+CR+ I +
Sbjct: 8 LSCPVCLELF-----TPPVLVLTCAHNFCKKCLEKILARQNCSHVNGQFSCPMCRKIIYL 62
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQI 125
G+ LP + LV +L+ ++ ++ K SQI
Sbjct: 63 RGRGIGGLPRNILVESILEKFKYEQENLHAKEQDRLSQI 101
>gi|403267987|ref|XP_003926072.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Saimiri boliviensis
boliviensis]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
GV LPP F V+QL D IP S H KL
Sbjct: 56 ---GVTKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|313747590|ref|NP_001186333.1| tripartite motif-containing protein 55 [Gallus gallus]
Length = 443
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLGYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQ 124
+R+ +P C H +
Sbjct: 115 PERKCDLPMCEEHEDE 130
>gi|297299506|ref|XP_001100542.2| PREDICTED: tripartite motif-containing protein 55-like [Macaca
mulatta]
Length = 455
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|426235580|ref|XP_004011758.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Ovis
aries]
Length = 447
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|347360915|ref|NP_001231507.1| E3 ubiquitin-protein ligase RNF152 [Sus scrofa]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|126336892|ref|XP_001365220.1| PREDICTED: midline-1 isoform 1 [Monodelphis domestica]
Length = 667
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQK 88
>gi|355779727|gb|EHH64203.1| Muscle-specific RING finger protein 2 [Macaca fascicularis]
Length = 547
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|355569135|gb|EHH25363.1| Muscle-specific RING finger protein 2 [Macaca mulatta]
Length = 548
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|426359811|ref|XP_004047155.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Gorilla gorilla gorilla]
Length = 548
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|12621082|ref|NP_075216.1| midline-1 [Rattus norvegicus]
gi|22653809|sp|P82458.1|TRI18_RAT RecName: Full=Midline-1; AltName: Full=Tripartite motif-containing
protein 18
gi|5919217|gb|AAD56247.1|AF186461_1 ring finger protein Fxy [Rattus norvegicus]
gi|149035925|gb|EDL90592.1| midline 1 [Rattus norvegicus]
Length = 667
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|47207992|emb|CAF91694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 352
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 22/116 (18%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI----------AASQTRETGTLRC 77
E L C CL M+ +LPC H +C C + I A G RC
Sbjct: 5 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQASNPYLPTRAGSLTSGGRFRC 61
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSR---------QRRHIIPKCSTHNSQ 124
P CR ++ + R GV L + LV ++D+ + +R+ +P C H +
Sbjct: 62 PSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESSSSKPVEERKEHVPMCDVHEEE 117
>gi|344273131|ref|XP_003408380.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Loxodonta africana]
Length = 241
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPIRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|341888289|gb|EGT44224.1| hypothetical protein CAEBREN_19829 [Caenorhabditis brenneri]
Length = 256
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 12 NSTLVETVSINYEDFNESFLTCGTCLCMY-DGGEHTPKLLPCSHTVCLHCLSRIAASQTR 70
N + E V N + F ++ +C CL Y + EHTP++L C HT+CL C R+
Sbjct: 171 NKEMEEKVEENGKPF--AWQSCEICLQKYSEVHEHTPRVLNCGHTLCLECARRVQT---- 224
Query: 71 ETGTLRCPICRE--QITIPRGGVAALPPSFLV 100
G + CP CRE + +P+ LP ++ V
Sbjct: 225 -LGGVLCPFCREGSWLKLPQN----LPKNYAV 251
>gi|17561342|ref|NP_507996.1| Protein F53F8.3 [Caenorhabditis elegans]
gi|3877546|emb|CAB04460.1| Protein F53F8.3 [Caenorhabditis elegans]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 30 FLTCGTCLCMYDGG--EHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ TC C C ++G + TP++L C HT+C+ C+ +I G ++CP CR I
Sbjct: 139 WRTCEICACKFEGETMDQTPRVLGCGHTMCMGCVQKIVGQ-----GYIKCPFCRIVTKIG 193
Query: 88 RGGVAALPPSFLV 100
+ LP +++V
Sbjct: 194 TTPLNNLPKNYIV 206
>gi|34878836|ref|NP_908973.1| tripartite motif-containing protein 55 isoform 1 [Homo sapiens]
gi|78099806|sp|Q9BYV6.2|TRI55_HUMAN RecName: Full=Tripartite motif-containing protein 55; AltName:
Full=Muscle-specific RING finger protein 2;
Short=MuRF-2; Short=MuRF2; AltName: Full=RING finger
protein 29
gi|119607300|gb|EAW86894.1| tripartite motif-containing 55, isoform CRA_b [Homo sapiens]
gi|193787199|dbj|BAG52405.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|114620339|ref|XP_001160681.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Pan
troglodytes]
gi|397522750|ref|XP_003831418.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Pan
paniscus]
Length = 548
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|431906543|gb|ELK10665.1| SH3 domain-containing RING finger protein 3 [Pteropus alecto]
Length = 220
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 18 TVSINYEDFNES----FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG 73
T + ED +ES L C CL D T K+LPC HT C CL I S+
Sbjct: 38 TAAAAGEDMDESSLLDLLECSVCLERLD---TTAKVLPCQHTFCRRCLESIVCSRHE--- 91
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHI 114
LRCP CR + GV LP + L+ +LLD + RQR +
Sbjct: 92 -LRCPECRILVGC---GVDELPANILLVRLLDGI-RQRPRV 127
>gi|297286509|ref|XP_001093190.2| PREDICTED: tripartite motif-containing protein 59-like [Macaca
mulatta]
Length = 588
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---------- 74
+F E LTC C +++ P++LPCSHT C +CL I + +G
Sbjct: 188 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIP 238
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 239 LKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 288
>gi|402861075|ref|XP_003894933.1| PREDICTED: tripartite motif-containing protein 59 isoform 3 [Papio
anubis]
Length = 588
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---------- 74
+F E LTC C +++ P++LPCSHT C +CL I + +G
Sbjct: 188 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIP 238
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 239 LKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 288
>gi|432930304|ref|XP_004081421.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63-like [Oryzias
latipes]
Length = 344
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICR 81
D E L+C CL M+ +LPC H +C C S + S+ G RCP CR
Sbjct: 17 DSLEKQLSCPICLEMF---TKPVVILPCQHNLCRSCASDLYDSRNPYRYSGGVFRCPTCR 73
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
++ + R GV L + LV ++D+ +Q+
Sbjct: 74 FEVVLDRHGVHGLQRNLLVENIIDIYKQQQ 103
>gi|410977788|ref|XP_003995282.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Felis catus]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|402878380|ref|XP_003902864.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Papio
anubis]
Length = 548
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|332251431|ref|XP_003274849.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Nomascus leucogenys]
Length = 547
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|14588848|emb|CAC43020.1| RING finger protein 29 [Homo sapiens]
Length = 548
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVGNIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|344273127|ref|XP_003408378.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Loxodonta africana]
Length = 538
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPIRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|351701847|gb|EHB04766.1| Midline-1 [Heterocephalus glaber]
Length = 667
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|345784364|ref|XP_003432547.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Canis lupus
familiaris]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|354490307|ref|XP_003507300.1| PREDICTED: midline-1-like isoform 2 [Cricetulus griseus]
Length = 629
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|149744237|ref|XP_001488161.1| PREDICTED: midline-1 isoform 2 [Equus caballus]
Length = 700
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|338728203|ref|XP_001494919.2| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Equus
caballus]
Length = 542
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|260833364|ref|XP_002611627.1| hypothetical protein BRAFLDRAFT_63709 [Branchiostoma floridae]
gi|229296998|gb|EEN67637.1| hypothetical protein BRAFLDRAFT_63709 [Branchiostoma floridae]
Length = 685
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L CG C Y P++L C HT CL CL + Q RE G + CP+C+++ +P
Sbjct: 3 LQCGLCGQQYS----RPRVLSCLHTFCLACLESLMKRQDRE-GEVCCPVCQQRTLLPSSD 57
Query: 91 VAALPPSFLVNQLLDLMS 108
+ LP +++ LL++ S
Sbjct: 58 PSTLPSDPIIDALLEVKS 75
>gi|86438366|gb|AAI12760.1| Tripartite motif-containing 55 [Bos taurus]
Length = 413
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQMNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|50540516|ref|NP_001002723.1| uncharacterized protein LOC436996 [Danio rerio]
gi|49900576|gb|AAH76089.1| Zgc:92594 [Danio rerio]
Length = 436
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
E LTC CL +Y P LLPC H CL CL R+ R G LRCP CR+
Sbjct: 12 EEELTCPVCLDLY----RDPHLLPCGHNFCLQCLRRLKGRSER--GRLRCPECRQ 60
>gi|268560968|ref|XP_002646333.1| Hypothetical protein CBG12046 [Caenorhabditis briggsae]
Length = 715
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 12 NSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE 71
++ L E + +D N +C C ++ PK LPC H+ C C++ + ++ +
Sbjct: 3 DADLAEIPPASPDDDNADRASCMVCYNVFHSKLRVPKSLPCGHSFCQGCINSLISNTPQF 62
Query: 72 TGTLRCPICREQITI--PRGGVAALPPSFLVNQLLD 105
L CP CR+ + P+ +++P +F++ ++L+
Sbjct: 63 VRGLPCPTCRKMVPYENPQNPQSSIPTNFVLREVLE 98
>gi|73999171|ref|XP_544105.2| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Canis
lupus familiaris]
Length = 550
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|47195169|emb|CAF94043.1| unnamed protein product [Tetraodon nigroviridis]
Length = 281
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C ++ PK+L C HT CL CL+RI ++ + T++CP+CR T+P G
Sbjct: 88 LECSICFSQFNNVFRCPKMLQCKHTFCLECLARINV-KSAQPSTIQCPLCRGVTTLPALG 146
Query: 91 VAAL 94
+ L
Sbjct: 147 LPTL 150
>gi|354490305|ref|XP_003507299.1| PREDICTED: midline-1-like isoform 1 [Cricetulus griseus]
gi|344241726|gb|EGV97829.1| Midline-1 [Cricetulus griseus]
Length = 667
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|327268156|ref|XP_003218864.1| PREDICTED: midline-1-like [Anolis carolinensis]
Length = 667
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|426395135|ref|XP_004063831.1| PREDICTED: midline-1 [Gorilla gorilla gorilla]
Length = 610
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|426235578|ref|XP_004011757.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Ovis
aries]
Length = 543
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|156395453|ref|XP_001637125.1| predicted protein [Nematostella vectensis]
gi|156224235|gb|EDO45062.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL G P LL C H+ CL C+ + Q+ E G ++CP CR ++ + R
Sbjct: 18 LMCPVCL----GEYKNPMLLRCYHSFCLRCVQEL-LHQSGEKGVVKCPQCRTEMEVKR-- 70
Query: 91 VAALPPSFLVNQLLDLMSRQR 111
L +F +N LLDLM R
Sbjct: 71 --RLKSNFYINNLLDLMDETR 89
>gi|348543806|ref|XP_003459373.1| PREDICTED: tripartite motif-containing protein 54-like [Oreochromis
niloticus]
Length = 335
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCL------------SRIAASQTRETGTL 75
E L C CL M+ +LPC H +C C SR ++S T G
Sbjct: 5 EKQLICPVCLEMFSK---PVVILPCQHNLCRKCANDIFQSANPLWHSRGSSSATASGGRF 61
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
RCP CR ++ + R GV L + LV ++D+ +Q
Sbjct: 62 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYRQQ 96
>gi|113679781|ref|NP_001038257.1| E3 ubiquitin-protein ligase SH3RF1 isoform 2 [Danio rerio]
Length = 857
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+
Sbjct: 22 LLECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVES 71
Query: 90 GVAALPPSFLVNQLLD-LMSRQRR 112
GV LP + L+ +LLD + R RR
Sbjct: 72 GVDELPSNILLVRLLDGIKQRPRR 95
>gi|2589223|gb|AAB83986.1| ring finger protein [Mus musculus]
Length = 667
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|443709386|gb|ELU04059.1| hypothetical protein CAPTEDRAFT_206661 [Capitella teleta]
Length = 360
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS---QTRETG--TLRCPICR 81
++ CG C PK LPC H CL CL + A + Q TG +CP+CR
Sbjct: 65 EDNIFDCGICQDRL----VAPKALPCLHNFCLKCLDQYAKTLSIQDLNTGDSVFQCPLCR 120
Query: 82 EQITIPRGGVAALPPSFLVNQL 103
+ +P GV P +F V +L
Sbjct: 121 AKTRVPNEGVKEFPTNFHVARL 142
>gi|291234819|ref|XP_002737346.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 741
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
+V S E F+++FL C C Y K+LPC H+ C C+ ++ Q
Sbjct: 1 MVSVESKILEQFDDNFLVCTVCSERY----RNAKILPCLHSFCEQCIHKLV--QKSGGKN 54
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR--HIIPKC 118
L CP+CR +P G +++ + VN+L+ L+ ++ + + + KC
Sbjct: 55 LPCPVCRRVHDLPEGA-SSVQTNVFVNELVVLLGKRDKETNYVQKC 99
>gi|55963355|emb|CAI12052.1| novel protein similar to vertebrate SH3 multiple domains 2 (SH3MD2)
[Danio rerio]
Length = 843
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+
Sbjct: 22 LLECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVES 71
Query: 90 GVAALPPSFLVNQLLD-LMSRQRR 112
GV LP + L+ +LLD + R RR
Sbjct: 72 GVDELPSNILLVRLLDGIKQRPRR 95
>gi|197101225|ref|NP_001127148.1| midline-1 [Pongo abelii]
gi|55725161|emb|CAH89447.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVPLQNIIDRFQK 88
>gi|403265974|ref|XP_003925180.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Saimiri boliviensis boliviensis]
Length = 600
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQTRETG-----TLRCP 78
+F E LTC C +++ P++LPCSHT C +CL + AS L+CP
Sbjct: 200 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCP 254
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
CR I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 255 NCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 300
>gi|148707931|gb|EDL39878.1| ring finger protein 152 [Mus musculus]
Length = 223
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 26 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 75
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 76 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 114
>gi|348506884|ref|XP_003440987.1| PREDICTED: midline-1-like [Oreochromis niloticus]
Length = 689
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCP 78
D ES LTC CL +++ P LLPC+H++C C RI S + G +CP
Sbjct: 2 DTLESELTCPICLELFED----PLLLPCAHSLCFGCAHRILVSHCTTNESVQSIGAFQCP 57
Query: 79 ICREQITI-PRGGVAALPPSFLVNQLLDLMSR 109
CR I++ P G+ L + + ++D + R
Sbjct: 58 TCRYVISLSPERGLEGLKRNVTLQNIIDRVQR 89
>gi|347658988|ref|NP_001231620.1| tripartite motif-containing protein 55 isoform 2 [Sus scrofa]
gi|325562540|gb|ADZ31294.1| muscle-specific RING finger protein 2, transcript variant 2 [Sus
scrofa]
Length = 443
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|410987219|ref|XP_003999902.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Felis
catus]
Length = 554
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|329664746|ref|NP_001192431.1| tripartite motif-containing protein 55 [Bos taurus]
gi|296480608|tpg|DAA22723.1| TPA: tripartite motif-containing 55 isoform 1 [Bos taurus]
Length = 545
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|12848905|dbj|BAB28131.1| unnamed protein product [Mus musculus]
Length = 196
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I I G+ +LP +F + +++ ++ + C H Q
Sbjct: 61 SIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQ 103
>gi|338728205|ref|XP_003365635.1| PREDICTED: tripartite motif-containing protein 55 [Equus caballus]
Length = 241
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|301761992|ref|XP_002916415.1| PREDICTED: tripartite motif-containing protein 55-like isoform 1
[Ailuropoda melanoleuca]
gi|281338755|gb|EFB14339.1| hypothetical protein PANDA_004486 [Ailuropoda melanoleuca]
Length = 542
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|428185118|gb|EKX53971.1| hypothetical protein GUITHDRAFT_132400 [Guillardia theta CCMP2712]
Length = 498
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPC--SHTVCLHCLSRIAASQTRETGTLRCPICR 81
EDF E LTC CL ++ P+ LPC SH VCL C + +QT T T+ CP+CR
Sbjct: 4 EDF-EDELTCPVCLMLFT----DPRTLPCGNSHNVCLECARGLWRNQTVPTLTINCPVCR 58
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
++ GV LP + + +++ + ++
Sbjct: 59 ATCSLA-NGVERLPLNLALKNMVEKLEAAQK 88
>gi|47219203|emb|CAG11221.1| unnamed protein product [Tetraodon nigroviridis]
Length = 464
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR---ETGTLRCPICR 81
D E L+C CL M+ +LPC H +C C S + S+ G RCP CR
Sbjct: 17 DSLEKQLSCPICLDMFT---KPVVILPCQHNLCRSCASDLYDSRNPYRFSGGVFRCPTCR 73
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
++ + R GV L + LV ++DL +Q+
Sbjct: 74 FEVVLDRHGVHGLQRNLLVENIIDLYKQQQ 103
>gi|344268950|ref|XP_003406319.1| PREDICTED: E3 ubiquitin-protein ligase RNF152-like [Loxodonta
africana]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|291242634|ref|XP_002741211.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 721
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG--TLRCPICR 81
++ N++ L C C Y ++LPC H+ C C+ ++ T + G T+ CP CR
Sbjct: 10 DELNKNSLICAICSERY----RNARILPCLHSFCEQCIGKL----TEKAGGKTVLCPTCR 61
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+P G+A++P + +N+L L+ ++R
Sbjct: 62 RGHDLP-DGLASIPKNLFLNELAGLIEKER 90
>gi|148356238|ref|NP_001038952.2| E3 ubiquitin-protein ligase SH3RF1 isoform 1 [Danio rerio]
gi|146327562|gb|AAI41795.1| LOC555925 protein [Danio rerio]
gi|190339698|gb|AAI63246.1| Si:dkey-15j16.4 [Danio rerio]
Length = 880
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+
Sbjct: 22 LLECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVES 71
Query: 90 GVAALPPSFLVNQLLD-LMSRQRR 112
GV LP + L+ +LLD + R RR
Sbjct: 72 GVDELPSNILLVRLLDGIKQRPRR 95
>gi|72072888|ref|XP_794183.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like
[Strongylocentrotus purpuratus]
Length = 352
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
PKLLPCSHT C CL+ + ++QT+ + CP+CR + V+ P + + L +
Sbjct: 24 PKLLPCSHTFCEDCLTLVHSAQTQAKDLIPCPVCRSDAPVSNNNVSNFPTNRIAQSLAE 82
>gi|149721361|ref|XP_001494942.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Equus
caballus]
Length = 549
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|431918500|gb|ELK17720.1| Midline-1 [Pteropus alecto]
Length = 331
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|410909079|ref|XP_003968018.1| PREDICTED: tripartite motif-containing protein 55-like [Takifugu
rubripes]
Length = 384
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI----------AASQTRE 71
N D E L C CL M+ +LPC H +C C + I A
Sbjct: 14 NNMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQASNPYLPTRAGSLTS 70
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---------QRRHIIPKCSTHN 122
G RCP CR ++ + R GV L + LV ++D+ + +R+ +P C H
Sbjct: 71 GGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESSSGKPVEERKEQMPMCDVHE 130
Query: 123 SQ 124
+
Sbjct: 131 GE 132
>gi|390356911|ref|XP_003728886.1| PREDICTED: uncharacterized protein LOC100893426 [Strongylocentrotus
purpuratus]
Length = 321
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ L C C G + LPC HT C CL+R +A+ T G+++C C++ +P
Sbjct: 10 DKMLKCSIC----QGRIKDTRSLPCGHTYCKDCLTR-SANATFPRGSIQCAECKKTSQLP 64
Query: 88 RGGVAALPPSFLVNQLLD 105
GG LP F +N L+D
Sbjct: 65 FGGAEGLPRCFAINSLVD 82
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 17 ETVSINYEDFN--ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
E +S+ F E+F TC CL + + LPC H+ C CL+ Q R T
Sbjct: 106 EELSLGRHGFQARETF-TCSFCLNLMRDACY----LPCGHSFCRECLT----MQPRTTPG 156
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKK 127
++C C + +P G+ LP ++ +N ++ + + T +SQ ++
Sbjct: 157 IKCIKCLKDHNLPARGIVGLPVAYRINSIVAEIKSNDSETSGESQTRSSQNRR 209
>gi|291227073|ref|XP_002733512.1| PREDICTED: tripartite motif protein-like, partial [Saccoglossus
kowalevskii]
Length = 594
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
NE L C C +YD TPK LPC HT C+ CL A E +CP C + I
Sbjct: 15 NEVPLKCSLCKYVYDVTNRTPKYLPCLHTFCVLCL----AGHVGE--IFQCPGCEHKSNI 68
Query: 87 PRGGVAALPPSFLV---NQLL 104
P+ G+ +P +F NQLL
Sbjct: 69 PK-GIDLIPTNFAFLNYNQLL 88
>gi|157821037|ref|NP_001099775.1| E3 ubiquitin-protein ligase RNF152 [Rattus norvegicus]
gi|325530236|sp|D4A723.1|RN152_RAT RecName: Full=E3 ubiquitin-protein ligase RNF152; AltName:
Full=RING finger protein 152
gi|149037232|gb|EDL91732.1| ring finger protein 152 (predicted) [Rattus norvegicus]
Length = 203
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|334325510|ref|XP_001379096.2| PREDICTED: tripartite motif-containing protein 55 [Monodelphis
domestica]
Length = 557
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L+ S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLNYKSLSKEQQTM---DTLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQ 124
+R+ P C H +
Sbjct: 115 PERKSEQPMCEEHEDE 130
>gi|260829199|ref|XP_002609549.1| hypothetical protein BRAFLDRAFT_101907 [Branchiostoma floridae]
gi|229294911|gb|EEN65559.1| hypothetical protein BRAFLDRAFT_101907 [Branchiostoma floridae]
Length = 608
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE-TGTLRCPICRE 82
E+F SF+TC C + + PKLL C H CL CL+ SQT + + + CPIC+E
Sbjct: 62 EEF--SFVTCRLCQGLLN----VPKLLSCWHPFCLPCLTDYKNSQTEQGSNVIACPICQE 115
Query: 83 QITIPRGGVAAL--PPSFLVNQLLDLMS 108
+P G+ L + ++++ DL S
Sbjct: 116 TTPLPSDGIGGLRHKANVFLSRVADLSS 143
>gi|2995449|emb|CAA75113.1| midline 1 protein [Mus musculus]
Length = 680
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|440794608|gb|ELR15768.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 701
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 29/102 (28%)
Query: 32 TCGTCLCMYDGGE--HTPKLLPCSHTVCLHCLSRI---------------AASQTRETGT 74
TC CL + E H P+LL C H+ C CL+R+ A T
Sbjct: 21 TCSVCLVAFSASEADHVPRLLKCGHSFCTACLTRLLDATPSTPTPTNSNSEAELEEATRP 80
Query: 75 LRCPICRE---------QITIPRGGVAALPPSFLVNQLLDLM 107
LRCP CR + P GV LP +F L+DL+
Sbjct: 81 LRCPKCRTVTRVRLVDGEAAAPAEGVKGLPRNF---DLIDLL 119
>gi|432112870|gb|ELK35460.1| E3 ubiquitin-protein ligase RNF152 [Myotis davidii]
Length = 203
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|405962355|gb|EKC28045.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 504
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-LRCPICREQIT 85
N++ C CL + PK+LPC HT C C+ + + E+ RCP+CRE I
Sbjct: 9 NDNGRQCSICLDSF----RCPKILPCKHTFCKRCV--LGYQREYESDDEFRCPLCRELIA 62
Query: 86 IPRGGVAALPPSFLVNQLL 104
+P+ GV ++ V +
Sbjct: 63 LPQNGVEGFCDNYFVRDIF 81
>gi|357630922|gb|EHJ78730.1| hypothetical protein KGM_04358 [Danaus plexippus]
Length = 864
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 46 TPKLLPCSHTVCLHCLSRIAASQTRETG----TLRCPICREQITIPRGGVAALPPSFLVN 101
+P++L C H C C+ ++ ++ ++ + CP+C+++ +P GG A+LP +++
Sbjct: 43 SPRVLSCLHVFCEACIDKLMVNEAGDSLKYDLAVECPLCKQETKMPGGGAASLPSDYVLT 102
Query: 102 QLLDLMSRQRRHIIPKCSTHNSQIKK 127
+LD+ + + + C + + +
Sbjct: 103 NILDVSAMDQSVVCTCCKSKEPAVAR 128
>gi|312385418|gb|EFR29928.1| hypothetical protein AND_00800 [Anopheles darlingi]
Length = 1298
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLIDYVKRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + + + L+L
Sbjct: 58 PYQGVQGFPTNVTLQRFLEL 77
>gi|157134133|ref|XP_001663162.1| tripartite motif protein trim2,3 [Aedes aegypti]
gi|108881414|gb|EAT45639.1| AAEL003104-PA [Aedes aegypti]
Length = 1293
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLIDYVKRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + + + L+L
Sbjct: 58 PYQGVQGFPTNVTLQRFLEL 77
>gi|449494210|ref|XP_002197496.2| PREDICTED: tripartite motif-containing protein 55 [Taeniopygia
guttata]
Length = 441
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++LS S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLSYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQ 124
+R+ P C H +
Sbjct: 115 PERKCDQPMCEEHEDE 130
>gi|127138778|ref|NP_898974.1| midline-1 [Mus musculus]
gi|127139933|ref|NP_034927.2| midline-1 [Mus musculus]
gi|342187073|sp|O70583.2|TRI18_MOUSE RecName: Full=Midline-1; AltName: Full=Midin; AltName:
Full=Tripartite motif-containing protein 18
Length = 680
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|410987223|ref|XP_003999904.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Felis
catus]
Length = 241
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|348576768|ref|XP_003474158.1| PREDICTED: E3 ubiquitin-protein ligase RNF152-like [Cavia
porcellus]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|260815627|ref|XP_002602574.1| hypothetical protein BRAFLDRAFT_81834 [Branchiostoma floridae]
gi|229287885|gb|EEN58586.1| hypothetical protein BRAFLDRAFT_81834 [Branchiostoma floridae]
Length = 606
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A R CP CR Q+ + R
Sbjct: 17 LTCSICLELFT----RPKVLPCQHTFCQGCLQHHAGGGVR----FMCPNCRRQVRLQRQE 68
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
V +LP + + L + + Q
Sbjct: 69 VKSLPDNLIAASLCERLQYQ 88
>gi|212284110|sp|A5D8S5.2|SH3R1_DANRE RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1
Length = 867
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+
Sbjct: 9 LLECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVES 58
Query: 90 GVAALPPSFLVNQLLD-LMSRQRR 112
GV LP + L+ +LLD + R RR
Sbjct: 59 GVDELPSNILLVRLLDGIKQRPRR 82
>gi|25395432|pir||H88071 protein ZK1240.3 [imported] - Caenorhabditis elegans
Length = 562
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 29 SFLTCGTCLCMYDG--GEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
SFL C C Y +H PK+L C H+VC +C A+Q + CP CRE I
Sbjct: 2 SFLQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNC-----ATQLITALLIICPFCRETTEI 56
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
G L +F + Q + +M + PKC H
Sbjct: 57 SDGDDQKLQKNFALVQAIQVM---KADSPPKCEEH 88
>gi|444708436|gb|ELW49499.1| E3 ubiquitin-protein ligase RNF152 [Tupaia chinensis]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|30520249|ref|NP_848894.1| E3 ubiquitin-protein ligase RNF152 [Mus musculus]
gi|237858592|ref|NP_001153840.1| E3 ubiquitin-protein ligase RNF152 [Mus musculus]
gi|41017728|sp|Q8BG47.1|RN152_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF152; AltName:
Full=RING finger protein 152
gi|26330950|dbj|BAC29205.1| unnamed protein product [Mus musculus]
gi|26336665|dbj|BAC32015.1| unnamed protein product [Mus musculus]
gi|111599314|gb|AAI18962.1| Ring finger protein 152 [Mus musculus]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|354490553|ref|XP_003507421.1| PREDICTED: E3 ubiquitin-protein ligase RNF152-like [Cricetulus
griseus]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|347658986|ref|NP_001231619.1| tripartite motif-containing protein 55 isoform 1 [Sus scrofa]
gi|325562505|gb|ADZ31293.1| muscle-specific RING finger protein 2, transcript variant 1 [Sus
scrofa]
Length = 539
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|431906976|gb|ELK11095.1| RING finger protein 152 [Pteropus alecto]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S + C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLMECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|73999169|ref|XP_858630.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Canis
lupus familiaris]
Length = 241
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|291235470|ref|XP_002737667.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 638
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ ++SFL C C Y K+LPC H+ C C+ ++ Q + CP+CR
Sbjct: 10 EEIDDSFLVCTVCSERY----RNAKILPCLHSFCEQCIHKLV--QKSGGKNIPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+P G + FL N+L+ L+ +Q+
Sbjct: 64 HDLPEGASSVQSNVFL-NELVVLLGKQK 90
>gi|171472535|dbj|BAG15989.1| ring finger protein 152 [Meriones unguiculatus]
Length = 96
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRTSQ----KDVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|41055281|ref|NP_957389.1| uncharacterized protein LOC394070 [Danio rerio]
gi|29436440|gb|AAH49414.1| Zgc:56376 [Danio rerio]
Length = 348
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLDMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ R GV L + LV ++D+ +Q+
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQE 104
>gi|431915178|gb|ELK15865.1| Tripartite motif-containing protein 59 [Pteropus alecto]
Length = 402
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
L+CP CR I I G+ +LP +F + +++ ++ + C H Q
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDLITCPEHYRQ 103
>gi|291223764|ref|XP_002731878.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 807
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL+C C + P+ LPC HT C CL A + G LRC CR Q
Sbjct: 14 EVREDFLSCSICFEFFK----KPRFLPCLHTFCEKCLVDYKA---QSEGVLRCATCRLQC 66
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + L+D + + ++
Sbjct: 67 DTP---IQGLKSNFFIASLIDSVQKLKQ 91
>gi|58866012|ref|NP_001012218.1| tripartite motif-containing protein 55 [Rattus norvegicus]
gi|81175037|sp|Q5PQN5.1|TRI55_RAT RecName: Full=Tripartite motif-containing protein 55; AltName:
Full=Muscle-specific RING finger protein 2;
Short=MuRF-2; Short=MuRF2; AltName: Full=RING finger
protein 29
gi|56268890|gb|AAH87100.1| Tripartite motif-containing 55 [Rattus norvegicus]
gi|149048526|gb|EDM01067.1| rCG41386 [Rattus norvegicus]
Length = 545
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 LDQPMCEEHEEE 130
>gi|45383848|ref|NP_989460.1| midline 1 (Opitz/BBB syndrome) [Gallus gallus]
gi|20385604|gb|AAM21353.1|AF374463_1 midline 1 [Gallus gallus]
Length = 667
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A+++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQK 88
>gi|34878852|ref|NP_908975.1| tripartite motif-containing protein 55 isoform 4 [Homo sapiens]
gi|332251435|ref|XP_003274851.1| PREDICTED: tripartite motif-containing protein 55 isoform 4
[Nomascus leucogenys]
gi|332826202|ref|XP_003311787.1| PREDICTED: tripartite motif-containing protein 55 [Pan troglodytes]
gi|426359815|ref|XP_004047157.1| PREDICTED: tripartite motif-containing protein 55 isoform 4
[Gorilla gorilla gorilla]
gi|23954320|emb|CAC81835.1| RING finger protein 29 [Homo sapiens]
Length = 241
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|440794644|gb|ELR15801.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 597
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 23/109 (21%)
Query: 32 TCGTCLCMYDGGE--HTPKLLPCSHTVCLHCLSRIAASQT------------RETGTLRC 77
TC C + E P+LL C H+ C CLS + AS T T LRC
Sbjct: 23 TCSVCFLAFSASEADRVPRLLKCGHSFCTACLSHLLASPTPTPTANSEAELEEATWPLRC 82
Query: 78 PICREQITI------PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCST 120
P CR + + GV LP +F L+DL+S R P T
Sbjct: 83 PKCRTETRVLLVDGEVAAGVKGLPRNF---DLIDLLSSALRQPRPTGET 128
>gi|9929937|dbj|BAB12125.1| hypothetical protein [Macaca fascicularis]
Length = 225
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEEE 130
>gi|301622578|ref|XP_002940607.1| PREDICTED: tripartite motif-containing protein 55-like [Xenopus
(Silurana) tropicalis]
Length = 497
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLQYKSFSKEQQTM---DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGNTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQ 124
+R+ P C H +
Sbjct: 115 PERKTDCPMCDEHEDE 130
>gi|14279435|gb|AAK58598.1|AF269102_1 midline-1 [Gallus gallus]
Length = 667
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A+++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQK 88
>gi|330843651|ref|XP_003293762.1| hypothetical protein DICPUDRAFT_99751 [Dictyostelium purpureum]
gi|325075871|gb|EGC29710.1| hypothetical protein DICPUDRAFT_99751 [Dictyostelium purpureum]
Length = 454
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D +E F TC C ++D P +LPCSH C C+ + Q T + CP CR ++
Sbjct: 53 DLSEDF-TCSICYELFD----KPIILPCSHNFCKLCIENMITGQKNNT-SFSCPFCRGEV 106
Query: 85 TIPRGGVAALP 95
+ GV LP
Sbjct: 107 KLNEKGVDGLP 117
>gi|348554271|ref|XP_003462949.1| PREDICTED: midline-1-like [Cavia porcellus]
Length = 788
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 126 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 181
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 182 HVITLSQRGLDGLKRNVTLQNIIDRFQK 209
>gi|301764246|ref|XP_002917555.1| PREDICTED: RING finger protein 152-like [Ailuropoda melanoleuca]
gi|325530234|sp|D2H6Z0.1|RN152_AILME RecName: Full=E3 ubiquitin-protein ligase RNF152; AltName:
Full=RING finger protein 152
gi|281348957|gb|EFB24541.1| hypothetical protein PANDA_005868 [Ailuropoda melanoleuca]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVAQLPDDPEVLAVIAIPHASEHTPVFIKL 94
>gi|71998586|ref|NP_494238.2| Protein ZK1240.9 [Caenorhabditis elegans]
gi|351065655|emb|CCD61649.1| Protein ZK1240.9 [Caenorhabditis elegans]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 29 SFLTCGTCLCMYDG--GEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
SFL C C Y +H PK+L C H+VC +C A+Q + CP CRE I
Sbjct: 2 SFLQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNC-----ATQLITALLIICPFCRETTEI 56
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
G L +F + Q + +M + PKC H
Sbjct: 57 SDGDDQKLQKNFALVQAIQVM---KADSPPKCEEH 88
>gi|426244908|ref|XP_004016258.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
3 [Ovis aries]
Length = 732
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPV---- 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
GV+AL +F ++ L++ M +
Sbjct: 62 -----XGVSALQNNFFISSLMEAMQQ 82
>gi|426235582|ref|XP_004011759.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Ovis
aries]
Length = 241
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 SDQPMCEEHEDE 130
>gi|351704123|gb|EHB07042.1| RING finger protein 152 [Heterocephalus glaber]
Length = 189
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|405965447|gb|EKC30823.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 655
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D N L CG C Y+ P++L C HT C CL + S T + CP+C I
Sbjct: 6 DSNSDPLMCGLCHKRYN----DPRILDCFHTYCCECLEKHVQS-THSKVSFPCPMCHMDI 60
Query: 85 TIPRGGVAALPPSFLVNQL 103
IP+ GV L +F V +
Sbjct: 61 HIPKAGVKGLHQNFYVRAI 79
>gi|321446461|gb|EFX60867.1| hypothetical protein DAPPUDRAFT_122787 [Daphnia pulex]
Length = 139
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ F+TC C+ Y+ PK+LPCSHTVCL CL I + CP CR+
Sbjct: 7 DEFVTCSICMSEYNEDGRKPKVLPCSHTVCLTCLQGIF-----RNNAIACPYCRQ 56
>gi|301622927|ref|XP_002940778.1| PREDICTED: RING finger protein 183-like [Xenopus (Silurana)
tropicalis]
Length = 178
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQTRETGTLRCPICREQITIPRG-G 90
C C Y+ TPKLL C+H CL CL R++ AS R + CP+CR +P G G
Sbjct: 13 CPVCWNPYNPTSRTPKLLHCNHCFCLECLERLSQASPMR----IPCPLCRHPTVLPEGQG 68
Query: 91 VAALP 95
V ALP
Sbjct: 69 VPALP 73
>gi|291244926|ref|XP_002742330.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 136
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ +E L C C + +PK+LPC HT C HCL + G L CP C+E
Sbjct: 16 EIDEQLLLCPICYSRF----KSPKILPCFHTFCEHCLDEWVGTN---NGKLVCPTCKEDT 68
Query: 85 TIPRGGVAALPPSFLVNQLLDLMS 108
+ GV + + + LL+L+S
Sbjct: 69 PLTSRGVKGIRENRFIADLLNLVS 92
>gi|432849834|ref|XP_004066635.1| PREDICTED: midline-1-like [Oryzias latipes]
Length = 687
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCP 78
D ES LTC CL +++ P LLPC+H++C C RI S + G +CP
Sbjct: 2 DTLESELTCPICLELFED----PLLLPCAHSLCFGCAHRILISHCATNESVQNIGAFQCP 57
Query: 79 ICREQITI-PRGGVAALPPSFLVNQLLDLMSR 109
CR I++ P G+ L + + ++D + R
Sbjct: 58 TCRYVISLSPERGLEGLKRNVTLQNIIDRVQR 89
>gi|341895819|gb|EGT51754.1| hypothetical protein CAEBREN_22252 [Caenorhabditis brenneri]
Length = 650
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 17/112 (15%)
Query: 20 SINYEDFNESFLTCGTCLCMY--DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRC 77
S+ F C C Y D + TP++L C HT C C+ +A TL+C
Sbjct: 148 SVGLNPFKMVCTECTICCSEYQDDVEDLTPRILTCGHTFCAGCVKNVAGGAQ----TLKC 203
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLD-LMSRQRRHIIP-------KCSTH 121
P CR T+ GV LP +F LLD + +Q+ I KC+ H
Sbjct: 204 PTCRSVTTLNSQGVKGLPKNF---SLLDSVREKQQEQSISEKPIQFGKCNKH 252
>gi|213511072|ref|NP_001133124.1| muscle specific ring finger protein 1-like [Salmo salar]
gi|197632015|gb|ACH70731.1| muscle specific ring finger protein 1-like [Salmo salar]
Length = 349
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLEMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ R GV L + LV ++D+ +Q+
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQE 104
>gi|47227011|emb|CAG05903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 667
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S + +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCTPSEPIQSITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
IT+ + G+ L + + ++D + R
Sbjct: 61 YVITLNQRGLEGLKRNVTLQNIIDRYQKASR 91
>gi|395830721|ref|XP_003788467.1| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Otolemur garnettii]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|344288613|ref|XP_003416041.1| PREDICTED: midline-1 isoform 2 [Loxodonta africana]
Length = 629
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|426342713|ref|XP_004037979.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Gorilla gorilla gorilla]
gi|426342717|ref|XP_004037981.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Gorilla gorilla gorilla]
gi|426342719|ref|XP_004037982.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Gorilla gorilla gorilla]
gi|426342721|ref|XP_004037983.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Gorilla gorilla gorilla]
gi|426342723|ref|XP_004037984.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Gorilla gorilla gorilla]
gi|426342725|ref|XP_004037985.1| PREDICTED: tripartite motif-containing protein 59 isoform 7
[Gorilla gorilla gorilla]
Length = 403
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I GV +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSITEIAPTGVESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|315585390|gb|ADU34198.1| MuRF1c [Salmo salar]
Length = 353
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
ES L+C CL M+ + +LPC H +C C S + S+ G RCP CR ++
Sbjct: 19 ESQLSCPICLEMF---QKPVVILPCQHNLCRGCASDLYDSRNPYHYSGGIFRCPTCRFEV 75
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+ R GV L + LV ++ + +Q
Sbjct: 76 VLDRHGVYGLQRNLLVENIIGIYKQQ 101
>gi|344288611|ref|XP_003416040.1| PREDICTED: midline-1 isoform 1 [Loxodonta africana]
Length = 667
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|301612587|ref|XP_002935797.1| PREDICTED: tripartite motif-containing protein 13-like [Xenopus
(Silurana) tropicalis]
gi|384952209|sp|F6ZQ54.1|TRI13_XENTR RecName: Full=Tripartite motif containing 13
Length = 408
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR----ETGTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL + +R + +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLDGVLEENSRTMQWRPSSFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH-IIPKCSTHNSQ 124
P GV L ++L+ +++ ++ + +P C H+ Q
Sbjct: 61 --TPTMGVNGLQVNYLLKGIVEKYNKIKVSPKMPVCKEHSDQ 100
>gi|297480904|ref|XP_002691745.1| PREDICTED: RING finger protein 224 [Bos taurus]
gi|358421560|ref|XP_003585017.1| PREDICTED: RING finger protein 224 [Bos taurus]
gi|296481990|tpg|DAA24105.1| TPA: hypothetical protein BOS_12229 [Bos taurus]
Length = 256
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HTVC C+ R+A + + CP CR+ +PRGGVA
Sbjct: 123 CIVCYSAYDLAGHLPRRLYCGHTVCQACVRRLATPAPAQR-WVPCPQCRQSTPMPRGGVA 181
Query: 93 AL 94
L
Sbjct: 182 ML 183
>gi|449268808|gb|EMC79646.1| RING finger protein 152 [Columba livia]
Length = 199
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP + V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGYSVSQLPDDPEVIAVIAIPHTSEHTPVFIKL 94
>gi|124486877|ref|NP_001074750.1| tripartite motif-containing protein 55 [Mus musculus]
gi|148702932|gb|EDL34879.1| mCG19772 [Mus musculus]
gi|151555211|gb|AAI48458.1| Tripartite motif-containing 55 [synthetic construct]
gi|157170512|gb|AAI53053.1| Tripartite motif-containing 55 [synthetic construct]
Length = 545
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 LDQPMCEEHEEE 130
>gi|148237892|ref|NP_001086824.1| tripartite motif containing 23 [Xenopus laevis]
gi|50415349|gb|AAH77512.1| Trim23-prov protein [Xenopus laevis]
Length = 588
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 43 LECGVCEDIFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQATELGDS 98
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQI 125
GV L +F LL+L+ R + +CST I
Sbjct: 99 GVWGLKKNF---ALLELLERLQNGASSQCSTVEEAI 131
>gi|213512264|ref|NP_001133095.1| LOC394070 protein-like [Salmo salar]
gi|197631923|gb|ACH70685.1| LOC394070 protein-like [Salmo salar]
Length = 350
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLEMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ R GV L + LV ++D+ +Q+
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQE 104
>gi|390367870|ref|XP_003731345.1| PREDICTED: uncharacterized protein LOC100890954 [Strongylocentrotus
purpuratus]
Length = 621
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
++ N + + L C CL + PK+L CSHT C CL Q E L CP
Sbjct: 1 MAANLKQVVDQNLECPVCLSFFK----EPKILTCSHTFCKGCLQSFLDFQPDEQ-KLSCP 55
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
+CR++ + G V+ L + V L++ + Q + CS +S+ K L
Sbjct: 56 VCRKETVVTDGEVSRLQTNLTVRALVEDVQTQ----VQVCSNCDSEDKAL 101
>gi|308387352|ref|NP_001184144.1| muscle RING finger 3 [Oncorhynchus mykiss]
gi|308053494|gb|ADO00984.1| muscle RING finger 3 [Oncorhynchus mykiss]
Length = 350
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLEMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ R GV L + LV ++D+ +Q+
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQE 104
>gi|449492324|ref|XP_004186142.1| PREDICTED: LOW QUALITY PROTEIN: ring finger protein 152
[Taeniopygia guttata]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP + V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGYSVSQLPDDPEVIAVIAIPHTSEHTPVFIKL 94
>gi|291394436|ref|XP_002713666.1| PREDICTED: ring finger protein 152-like [Oryctolagus cuniculus]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKL 94
>gi|31565492|gb|AAH53671.1| SH3RF1 protein [Homo sapiens]
Length = 1056
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D + K+LPC HT C CL I S+ LRCP CR T+
Sbjct: 9 LLECPVCLERLDA---SAKVLPCQHTFCKRCLLGIVGSRNE----LRCPECR---TLVGS 58
Query: 90 GVAALPPSFLVNQLLD 105
GV LP + L+ +LLD
Sbjct: 59 GVEELPSNILLVRLLD 74
>gi|47227681|emb|CAG09678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 948
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C ++ PK+L C HT CL CL+RI ++ + T++CP+CR T+P G
Sbjct: 755 LECSICFSQFNNVFCCPKMLQCKHTFCLECLARINV-KSAQPSTIQCPLCRGVTTLPALG 813
Query: 91 VAAL 94
+ L
Sbjct: 814 LPTL 817
>gi|405969073|gb|EKC34083.1| Tripartite motif-containing protein 54 [Crassostrea gigas]
Length = 614
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-----TLRCPICREQIT 85
L C CL +D P +LPCSH C CL I +++ + T + CP+C+ +I
Sbjct: 5 LMCAICLEFFD----EPLMLPCSHNFCKKCLQGIISARDQYTNYRSQRYVDCPLCQRKIP 60
Query: 86 IPRGGVAALPPSFLVNQLLD 105
+ R GV P VN+ LD
Sbjct: 61 LERSGVDQFP----VNRALD 76
>gi|118086491|ref|XP_418995.2| PREDICTED: E3 ubiquitin-protein ligase RNF152 [Gallus gallus]
gi|325530235|sp|E1C2W7.1|RN152_CHICK RecName: Full=E3 ubiquitin-protein ligase RNF152; AltName:
Full=RING finger protein 152
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP + V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGYSVSQLPDDPEVIAVIAIPHTSEHTPVFIKL 94
>gi|74187300|dbj|BAE22636.1| unnamed protein product [Mus musculus]
Length = 260
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|410906043|ref|XP_003966501.1| PREDICTED: midline-1-like [Takifugu rubripes]
Length = 687
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCP 78
D ES LTC CL +++ P LLPC+H++C C RI S + G +CP
Sbjct: 2 DTLESELTCPICLELFED----PLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCP 57
Query: 79 ICREQITI-PRGGVAALPPSFLVNQLLDLMSR 109
CR I++ P G+ L + + ++D + R
Sbjct: 58 TCRYVISLSPERGLEGLKRNVTLQNIIDRVQR 89
>gi|326917107|ref|XP_003204844.1| PREDICTED: e3 ubiquitin-protein ligase RNF152-like [Meleagris
gallopavo]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP + V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGYSVSQLPDDPEVIAVIAIPHTSEHTPVFIKL 94
>gi|147907226|ref|NP_001086683.1| tripartite motif containing 63, E3 ubiquitin protein ligase
[Xenopus laevis]
gi|50414796|gb|AAH77305.1| Rnf30-prov protein [Xenopus laevis]
Length = 356
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET---GTLRCPI 79
E L C CL M++ +LPC H +C C + + + TR + G RCP
Sbjct: 18 EKQLICPICLEMFNK---PVVILPCQHNLCRKCANDVFQAGNPYWSTRSSVSGGRFRCPT 74
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQ 124
CR ++ + R GV L + LV ++D+ + +++ P C H +
Sbjct: 75 CRHEVILDRHGVYGLQRNLLVENIIDIYKQDCTSRPEKKENHPMCEKHEDE 125
>gi|147899728|ref|NP_001087549.1| E3 ubiquitin-protein ligase rnf152-B [Xenopus laevis]
gi|82198788|sp|Q68EV7.1|R152B_XENLA RecName: Full=E3 ubiquitin-protein ligase rnf152-B; AltName:
Full=RING finger protein 152-B
gi|51258456|gb|AAH80093.1| MGC84262 protein [Xenopus laevis]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+S L C C Y PKLL C HT C CL ++ ASQ LRCP CR
Sbjct: 6 QDSLLECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRASQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLD 105
GV LPP + V++L D
Sbjct: 56 ---GVTKLPPGYSVSELPD 71
>gi|291225424|ref|XP_002732700.1| PREDICTED: MGC80218 protein-like [Saccoglossus kowalevskii]
Length = 755
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S + ++ +LTC C ++ K+LPC H+ C CL + ++ RCP+
Sbjct: 7 STTLDQIDDQYLTCSICFERFNNA----KILPCQHSFCELCLLKWVNKHRQD----RCPV 58
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHI 114
CR + + + LP S L+N ++ ++ + + +
Sbjct: 59 CRHKCQLSTSRIRKLPSSLLINGVIGIIEAREKQL 93
>gi|395843918|ref|XP_003794718.1| PREDICTED: tripartite motif-containing protein 59-like, partial
[Otolemur garnettii]
Length = 141
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I I G+ +LP +F + +++ ++ I C H Q
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|148708743|gb|EDL40690.1| mCG50212 [Mus musculus]
Length = 255
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|115686193|ref|XP_796095.2| PREDICTED: tripartite motif-containing protein 45-like
[Strongylocentrotus purpuratus]
Length = 618
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 20 SINYEDFN------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRE 71
S++Y+D +S LTCG C Y+ P+LLPC HT C+ CL + + R+
Sbjct: 4 SVDYKDNTIIQEAMDSRLTCGICRGRYN----DPRLLPCLHTYCMSCLQGLESHVLFYRD 59
Query: 72 TG------------------TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
G + CP C ++ + +GG+ P F+ ++L L S
Sbjct: 60 DGSDTSSLSSMLSHLGNKASAIMCPACGTEVELSKGGLGVFPVDFMAQRILVLDS 114
>gi|308456629|ref|XP_003090741.1| hypothetical protein CRE_03516 [Caenorhabditis remanei]
gi|308260767|gb|EFP04720.1| hypothetical protein CRE_03516 [Caenorhabditis remanei]
Length = 949
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 20/105 (19%)
Query: 10 STNSTLVETVSINYEDFNESF-------------LTCGTCLCMYDGGEHTPKLLP-CSHT 55
S+N V +S++Y F F L C C+ Y+ + P+++P C HT
Sbjct: 225 SSNKVTVGWISVDYHSFPIVFPIRIVEQPQELESLECKICVRQYNETDRIPRVIPVCGHT 284
Query: 56 VCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
+C C I + TL+CP+ R + + GG ++LP +F +
Sbjct: 285 LCEDCARNIISG-----NTLKCPVDRRDVNV-EGGASSLPRNFAI 323
>gi|118404880|ref|NP_001072557.1| tripartite motif containing 63, E3 ubiquitin protein ligase
[Xenopus (Silurana) tropicalis]
gi|115292064|gb|AAI22074.1| tripartite motif-containing 63 [Xenopus (Silurana) tropicalis]
Length = 348
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET---GTLRCPI 79
E L C CL M++ +LPC H +C C + + + TR + G RCP
Sbjct: 18 EKQLICPICLEMFNK---PVVILPCQHNLCRKCANDVFQAGNPYWSTRSSVSGGRFRCPT 74
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQ 124
CR ++ + R GV L + LV ++D+ + +++ P C H +
Sbjct: 75 CRHEVILDRHGVYGLQRNLLVENIIDIYKQDCTSRPEKKENHPMCEKHEDE 125
>gi|443695283|gb|ELT96224.1| hypothetical protein CAPTEDRAFT_209734 [Capitella teleta]
Length = 659
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
L C C YD + P++LPC H+ C CL R E G CP CRE +
Sbjct: 13 DLLRCNIC---YDRFKE-PRVLPCLHSFCQSCLQRHIDINASEHGVFCCPTCRETTILSS 68
Query: 89 GGVAALPPSFLVNQLLDLM 107
G+ F V Q+ DL+
Sbjct: 69 AGIEGFRRDFRVTQIEDLL 87
>gi|156331984|ref|XP_001619224.1| hypothetical protein NEMVEDRAFT_v1g152025 [Nematostella vectensis]
gi|156201997|gb|EDO27124.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
P++LPC HT C CL +A S+ + G CP C+ + + V++L +FL+N LL +
Sbjct: 26 PRVLPCLHTFCYECLVGLA-SRYKTEGKWPCPQCKMVVQVSPAEVSSLKVNFLMNTLLSV 84
Query: 107 MSRQRRHIIPKCSTHNSQ 124
++ + P C SQ
Sbjct: 85 VTNGSKSAKPHCQMCTSQ 102
>gi|390363179|ref|XP_003730311.1| PREDICTED: transcription intermediary factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK+L CSH+ C CL + + + LRCP+CR + +P V+ LP + + L++
Sbjct: 25 PKILSCSHSYCKTCLDNLLKCHSNDQ-VLRCPVCRAETQVPNQDVSKLPANLALKSLIED 83
Query: 107 MSRQRR 112
+ Q +
Sbjct: 84 VKNQHQ 89
>gi|341898739|gb|EGT54674.1| hypothetical protein CAEBREN_11992 [Caenorhabditis brenneri]
Length = 424
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 31 LTCGTCLCMY--DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
+ C C + D + TP++L C HT C C+ +A S TL+CP CR T+
Sbjct: 4 IKCSICFIEFKDDVEDLTPRILTCGHTFCAGCVKNVAGSAQ----TLKCPTCRTVTTLNN 59
Query: 89 GGVAALPPSFLVNQLLDLMSRQRRHI-IP-------KCSTH 121
GV L +F LL+ M +++ + IP KC+ H
Sbjct: 60 QGVNGLSKNF---SLLETMREKQQELSIPEKPIQFGKCNKH 97
>gi|260817074|ref|XP_002603412.1| hypothetical protein BRAFLDRAFT_222627 [Branchiostoma floridae]
gi|229288731|gb|EEN59423.1| hypothetical protein BRAFLDRAFT_222627 [Branchiostoma floridae]
Length = 69
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y H PK+L C H+ CL CL Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----HRPKVLSCLHSFCLQCLEEFLKKQKVKT-ELDCPTCRSKTL 64
Query: 86 IPRGG 90
+P GG
Sbjct: 65 LPGGG 69
>gi|58037477|ref|NP_084085.1| uncharacterized protein LOC381845 [Mus musculus]
gi|12844086|dbj|BAB26231.1| unnamed protein product [Mus musculus]
gi|26324470|dbj|BAC25989.1| unnamed protein product [Mus musculus]
gi|148706144|gb|EDL38091.1| RIKEN cDNA 2310014L17 [Mus musculus]
gi|187954457|gb|AAI41221.1| RIKEN cDNA 2310014L17 gene [Mus musculus]
Length = 332
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI-P 87
S + C C+ +DG PK L C H CL CL+R++ + + CP+CR + P
Sbjct: 59 SPMECLICVSPFDGIFKLPKRLDCGHVFCLECLARLSLATAGGGDAVACPMCRAPTRLAP 118
Query: 88 RGGVAALP--PSFLVNQLLDLMSRQ 110
R G+ ALP P L + RQ
Sbjct: 119 RRGLPALPTQPGLLPRDARAPLPRQ 143
>gi|321467875|gb|EFX78863.1| hypothetical protein DAPPUDRAFT_245735 [Daphnia pulex]
Length = 313
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
TCG C YD + PK+LPCSHT C C+ + S L+CP+CR + + V
Sbjct: 14 TCGICFIKYDLLMNRPKVLPCSHTYCFTCIQVMIGS----GNPLKCPMCR-KTAVGIDKV 68
Query: 92 AALP 95
+LP
Sbjct: 69 ESLP 72
>gi|224042798|ref|XP_002186604.1| PREDICTED: midline-1 [Taeniopygia guttata]
Length = 667
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|193083079|ref|NP_001122372.1| zinc finger protein ZF(Bbox/RING)-6 [Ciona intestinalis]
gi|93003142|tpd|FAA00154.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 431
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET-----GTLRCPICRE 82
E L C CL +Y +LPC H +C C + + Q R T G RCP CR
Sbjct: 19 ERLLMCPICLEIY---TKPVVILPCQHNLCRKCANDVF--QNRGTPMGSGGRFRCPTCRY 73
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
++ + R GV L + LV ++D+ + R
Sbjct: 74 EVVLDRHGVYGLQRNLLVENIIDMYQTEGR 103
>gi|413945241|gb|AFW77890.1| putative protein kinase superfamily protein [Zea mays]
Length = 1681
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD E TP LL C H C CLSR+ A+ TL CP CR +T V+
Sbjct: 6 CSLCNVRYDEEERTPLLLHCGHGFCRACLSRMLAAAP--GATLPCPRCR-HLTAVGNSVS 62
Query: 93 ALPPSF 98
AL +F
Sbjct: 63 ALRKNF 68
>gi|449278292|gb|EMC86188.1| Midline-1 [Columba livia]
Length = 667
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|432877955|ref|XP_004073275.1| PREDICTED: probable E3 ubiquitin-protein ligase MID2-like [Oryzias
latipes]
Length = 609
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL------RCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T L +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSTTKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ G+ L + + ++D +
Sbjct: 61 YVITLNHRGLEGLKRNVTLQNIIDRFQK 88
>gi|300797215|ref|NP_001180210.1| midline-1 isoform 6 [Homo sapiens]
Length = 228
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|291227296|ref|XP_002733628.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 664
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI- 86
+ FL C C +G ++PKLLPC H+ C +CL + S + E +L CP+C++ +++
Sbjct: 12 DQFLRCKLC----EGDFNSPKLLPCLHSFCRNCLDGLLKSDSNER-SLNCPVCKQYVSLY 66
Query: 87 PRGGVAALPPSFLVNQLLDLMS 108
+ GV L + + L + M
Sbjct: 67 GKHGVDGLRDNEFIASLTETMG 88
>gi|27436877|ref|NP_775107.1| tripartite motif-containing protein 59 [Homo sapiens]
gi|74714421|sp|Q8IWR1.1|TRI59_HUMAN RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 104; AltName: Full=Tumor
suppressor TSBF-1
gi|27358012|gb|AAN86853.1| tumor suppressor TSBF1 [Homo sapiens]
gi|80475903|gb|AAI09260.1| Tripartite motif-containing 59 [Homo sapiens]
gi|80478299|gb|AAI09261.1| Tripartite motif-containing 59 [Homo sapiens]
gi|119599041|gb|EAW78635.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599042|gb|EAW78636.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599043|gb|EAW78637.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599044|gb|EAW78638.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|158256004|dbj|BAF83973.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I G+ +LP +F + +++ ++ I C H Q
Sbjct: 61 SITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|317419904|emb|CBN81940.1| Tripartite motif-containing protein 55 [Dicentrarchus labrax]
Length = 372
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-----TR-----ETGT 74
D E L C CL M+ +LPC H +C C + I + TR G
Sbjct: 2 DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFTASNPYLPTRGGSLTSGGR 58
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---------QRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D+ + +R+ +P C H +
Sbjct: 59 FRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESSSSKPAPERKQEMPMCEVHEEE 117
>gi|260794836|ref|XP_002592413.1| hypothetical protein BRAFLDRAFT_67279 [Branchiostoma floridae]
gi|229277632|gb|EEN48424.1| hypothetical protein BRAFLDRAFT_67279 [Branchiostoma floridae]
Length = 339
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS-RIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PKLLPC HT C CL SQ L+CP C+ Q+++P
Sbjct: 18 LSCSICLELFT----RPKLLPCGHTFCQDCLQVYFCESQDH----LKCPNCQLQVSLPPE 69
Query: 90 GVAALPPSFLVNQLLDLMSR----QRRHIIP--KCSTHNSQIKKL 128
GV LP + + + +S+ + P KCS H S+ +L
Sbjct: 70 GVTGLPENHSAAKFCEKLSKTDANADKQAKPRNKCSQHPSEDYQL 114
>gi|147905260|ref|NP_001085095.1| tripartite motif containing 54 [Xenopus laevis]
gi|47939944|gb|AAH72166.1| MGC80214 protein [Xenopus laevis]
Length = 360
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQASNPLWQSRGSSTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-RRHIIPKCSTH 121
CP CR ++ + R GV L + LV ++D+ ++ R + PK H
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPMNPKSEQH 123
>gi|157819757|ref|NP_001102587.1| E3 ubiquitin-protein ligase RNF182 [Rattus norvegicus]
gi|300681097|sp|D3ZBM4.1|RN182_RAT RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|149045107|gb|EDL98193.1| rCG63350 [Rattus norvegicus]
Length = 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|26343091|dbj|BAC35202.1| unnamed protein product [Mus musculus]
Length = 197
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQ 124
P C H +
Sbjct: 119 LDQPMCEEHEEE 130
>gi|260815247|ref|XP_002602385.1| hypothetical protein BRAFLDRAFT_63526 [Branchiostoma floridae]
gi|229287694|gb|EEN58397.1| hypothetical protein BRAFLDRAFT_63526 [Branchiostoma floridae]
Length = 658
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL G PK+LPC HT CL CL R+ ++ G CP+CR + + +
Sbjct: 13 EFLECQICL----DGLQQPKILPCLHTFCLPCLERMLEAEP--GGKFSCPVCRLDVPLAQ 66
Query: 89 GGVA 92
G A
Sbjct: 67 DGGA 70
>gi|198416991|ref|XP_002121541.1| PREDICTED: similar to GG21942, partial [Ciona intestinalis]
Length = 426
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E+ +TC CL D H PK+LPC HT CL CL + ++ +RCP CR +
Sbjct: 6 ETLVTCAVCL---DRFVH-PKILPCQHTFCLKPCLQNLVIDKS-----IRCPHCRTIHKL 56
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P+ G++ P + + +LD
Sbjct: 57 PKRGLSDFPNNLTIVSILDF 76
>gi|440908358|gb|ELR58382.1| Tripartite motif-containing protein 55 [Bos grunniens mutus]
Length = 548
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQVE 58
Query: 65 ----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR----- 109
+ G RCP CR ++ + R G+ L + LV ++D+ +
Sbjct: 59 QASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRP 118
Query: 110 QRRHIIPKCSTHNSQ 124
+++ P C H +
Sbjct: 119 EKKSDQPMCEEHEDE 133
>gi|341878192|gb|EGT34127.1| hypothetical protein CAEBREN_16683 [Caenorhabditis brenneri]
Length = 368
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT------LRCPICREQI 84
+C C +D H PK+L C H++C CL R + A Q G CP CR +
Sbjct: 22 SCIICTEDFDSNAHVPKVLACGHSICFTCLDRMLNAIQVPYVGDGHCSTGFECPTCRLHM 81
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
IP P ++ QLL+ ++ Q
Sbjct: 82 QIPDNKAKGFPNNY---QLLESIAPQ 104
>gi|296197375|ref|XP_002746254.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Callithrix
jacchus]
Length = 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|390362239|ref|XP_003730105.1| PREDICTED: tripartite motif-containing protein 4-like
[Strongylocentrotus purpuratus]
Length = 330
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + L+CP+CR + +P
Sbjct: 13 LECPVCLDTFTD----PKILSCSHTYCKTCLDNLLECHGNDQ-MLQCPVCRAETQVPNRD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR 112
V+ LP S + L++ + R+
Sbjct: 68 VSKLPASLALKSLIEDVKNHRQ 89
>gi|156408004|ref|XP_001641647.1| predicted protein [Nematostella vectensis]
gi|156228786|gb|EDO49584.1| predicted protein [Nematostella vectensis]
Length = 799
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C M+ P+LLPC HT C CL + ++ TL CP CR + + G
Sbjct: 69 LFCPLCHEMF----ANPRLLPCLHTFCKRCLENLVPPRSH---TLSCPSCRLDVALGERG 121
Query: 91 VAALPPSFLVNQLLDLMS 108
+ P+F+V ++D+ +
Sbjct: 122 INGFAPNFVVTTMIDVAA 139
>gi|260826013|ref|XP_002607960.1| hypothetical protein BRAFLDRAFT_213710 [Branchiostoma floridae]
gi|229293310|gb|EEN63970.1| hypothetical protein BRAFLDRAFT_213710 [Branchiostoma floridae]
Length = 77
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F E LTC CL ++ PK+L C HT C CL +A + T CPICR ++
Sbjct: 7 FREE-LTCSICLELFT----KPKVLLCQHTFCKDCLQGLAGMRR----TFHCPICRRKVK 57
Query: 86 IPRGGVAALPPSFLVNQLLD 105
+PR +A LP + + + +
Sbjct: 58 LPRSRIAGLPDNLIAANMCE 77
>gi|148232016|ref|NP_001091177.1| uncharacterized protein LOC100036938 [Xenopus laevis]
gi|120538018|gb|AAI29691.1| LOC100036938 protein [Xenopus laevis]
Length = 356
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET---GTLRCPI 79
E L C CL M++ +LPC H +C C + + + TR + G RCP
Sbjct: 18 EKQLICPICLEMFNK---PVVILPCQHNLCRKCANDVFQAGNPYWSTRTSASGGRFRCPT 74
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQ 124
CR ++ + R GV L + LV ++D+ + +++ P C H +
Sbjct: 75 CRHEVILDRHGVYGLQRNLLVENIIDIYKQECSSRPEKKENHPMCEKHEDE 125
>gi|395830501|ref|XP_003788363.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Otolemur
garnettii]
Length = 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|341901319|gb|EGT57254.1| hypothetical protein CAEBREN_12231 [Caenorhabditis brenneri]
Length = 570
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 18/97 (18%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR--------CPIC 80
S L CG C +D +H PK+L C HT C C+ +I RE ++ CP
Sbjct: 121 SLLECGVCCHDFDDKDHVPKMLSCGHTFCWQCILKI----EREHNSMNMFGRPAYACPFD 176
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
R +I +P LP + LV LDL+ +++ + K
Sbjct: 177 RSEIHLP---ACMLPKNRLV---LDLIEEKKQEELRK 207
>gi|260812431|ref|XP_002600924.1| hypothetical protein BRAFLDRAFT_214943 [Branchiostoma floridae]
gi|229286214|gb|EEN56936.1| hypothetical protein BRAFLDRAFT_214943 [Branchiostoma floridae]
Length = 68
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E ++ F C C + PK+LPC HT C HCL Q + T CPICR+
Sbjct: 8 EKVSDDFTKCTICFYTFKN----PKVLPCLHTFCEHCLREWV--QKNDGDTFPCPICRQP 61
Query: 84 ITIPRGG 90
+ +P+ G
Sbjct: 62 VPLPQNG 68
>gi|260826804|ref|XP_002608355.1| hypothetical protein BRAFLDRAFT_91314 [Branchiostoma floridae]
gi|229293706|gb|EEN64365.1| hypothetical protein BRAFLDRAFT_91314 [Branchiostoma floridae]
Length = 635
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ ++ FLTC CL + PKLL C H+ C CL T++CP C+
Sbjct: 7 KEISDDFLTCQICLDTF----RKPKLLDCVHSFCEECLKEYVNPGDT---TVKCPTCQRD 59
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ + GV+ L +F + L++ + +++
Sbjct: 60 TALKQNGVSGLKDNFFILNLVETIGARKK 88
>gi|31874062|emb|CAD97947.1| hypothetical protein [Homo sapiens]
Length = 323
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I G+ +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|390355582|ref|XP_003728581.1| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK+L CSHT C CL + + LRCP+CR + +P V+ LP S + L++
Sbjct: 25 PKILSCSHTYCKACLDNLLECHGNDQ-MLRCPVCRAETQVPNREVSKLPASLALKSLIED 83
Query: 107 MSRQRR 112
+ Q +
Sbjct: 84 VKNQYQ 89
>gi|297677191|ref|XP_002816489.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Pongo
abelii]
gi|297677195|ref|XP_002816491.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Pongo
abelii]
gi|297677197|ref|XP_002816492.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 4 [Pongo
abelii]
gi|297677199|ref|XP_002816493.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 5 [Pongo
abelii]
gi|395736747|ref|XP_003776797.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pongo abelii]
gi|395736749|ref|XP_003776798.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pongo abelii]
Length = 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|198457346|ref|XP_001360631.2| GA18517 [Drosophila pseudoobscura pseudoobscura]
gi|198135946|gb|EAL25206.2| GA18517 [Drosophila pseudoobscura pseudoobscura]
Length = 858
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
L C CL D T K+LPC HT C CL I ASQ + LRCP CR ++
Sbjct: 8 DLLECSVCLDRLDT---TSKVLPCQHTFCRKCLVDIVASQHK----LRCPECRVLVS--- 57
Query: 89 GGVAALPPSFLVNQLLDLMSR 109
+ LPP+ L+ ++L+ M +
Sbjct: 58 SKIDELPPNVLLMRILEGMKQ 78
>gi|195150539|ref|XP_002016208.1| GL11468 [Drosophila persimilis]
gi|194110055|gb|EDW32098.1| GL11468 [Drosophila persimilis]
Length = 858
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
L C CL D T K+LPC HT C CL I ASQ + LRCP CR ++
Sbjct: 8 DLLECSVCLDRLDT---TSKVLPCQHTFCRKCLVDIVASQHK----LRCPECRVLVS--- 57
Query: 89 GGVAALPPSFLVNQLLDLMSR 109
+ LPP+ L+ ++L+ M +
Sbjct: 58 SKIDELPPNVLLMRILEGMKQ 78
>gi|194755868|ref|XP_001960201.1| GF11645 [Drosophila ananassae]
gi|190621499|gb|EDV37023.1| GF11645 [Drosophila ananassae]
Length = 843
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
L C CL D T K+LPC HT C CL I ASQ + LRCP CR ++
Sbjct: 8 DLLECSVCLERLDT---TSKVLPCQHTFCRKCLQDIVASQHK----LRCPECRILVS--- 57
Query: 89 GGVAALPPSFLVNQLLDLMSR 109
+ LPP+ L+ ++L+ M +
Sbjct: 58 ARIDELPPNVLLMRILEGMKQ 78
>gi|351707785|gb|EHB10704.1| RING finger protein 182 [Heterocephalus glaber]
Length = 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYSRYNLKQRKPKVLGCCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|34147266|ref|NP_899027.1| E3 ubiquitin-protein ligase RNF182 [Mus musculus]
gi|81898769|sp|Q8C432.1|RN182_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|26350311|dbj|BAC38795.1| unnamed protein product [Mus musculus]
gi|58476820|gb|AAH89488.1| Ring finger protein 182 [Mus musculus]
gi|148709051|gb|EDL40997.1| ring finger protein 182 [Mus musculus]
Length = 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|3462505|gb|AAC32999.1| midline 1 cerebellar isoform 2 [Homo sapiens]
Length = 228
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|356518567|ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
Length = 1815
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP-RGGV 91
C CL +D + P++L C H+VC CL+ + R T+RCP C + + P + G
Sbjct: 6 CPVCLQSFDERDAIPRVLSCGHSVCEACLAELP---QRYQDTIRCPACTQLVKYPSQQGP 62
Query: 92 AALPPSFLVNQLLDLMSRQRRH 113
++LP + +DL+ +H
Sbjct: 63 SSLPKN------IDLLRLSLQH 78
>gi|354471506|ref|XP_003497983.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Cricetulus
griseus]
gi|344236773|gb|EGV92876.1| RING finger protein 182 [Cricetulus griseus]
Length = 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|410896872|ref|XP_003961923.1| PREDICTED: midline-1-like [Takifugu rubripes]
Length = 669
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S + +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
IT+ + G+ L + + ++D
Sbjct: 61 YVITLNQRGLEGLKRNVTLQNIID 84
>gi|326673648|ref|XP_003199950.1| PREDICTED: probable E3 ubiquitin-protein ligase MID2-like [Danio
rerio]
Length = 268
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL------RCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T L +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSSTKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 YVITLNQRGLEGLKRNVTLQNIIDRFQK 88
>gi|12855490|dbj|BAB30354.1| unnamed protein product [Mus musculus]
Length = 389
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQTRETG-----TLRCPICR 81
E LTC C +++ P++LPCSHT C +CL + AS L+C CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIELKCANCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
I I G+ +LP +F + +++ ++ + C H Q
Sbjct: 61 NIIEIASSGIKSLPINFALRAIIEKYQQEDHPDVVSCPEHYRQ 103
>gi|22749455|ref|NP_689950.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|259013541|ref|NP_001158504.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|259013543|ref|NP_001158505.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|259013545|ref|NP_001158506.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|55626010|ref|XP_527238.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Pan
troglodytes]
gi|114605567|ref|XP_001169582.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Pan
troglodytes]
gi|332822974|ref|XP_003311075.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pan troglodytes]
gi|397505309|ref|XP_003823211.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Pan
paniscus]
gi|397505311|ref|XP_003823212.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Pan
paniscus]
gi|397505313|ref|XP_003823213.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Pan
paniscus]
gi|403270872|ref|XP_003927380.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403270874|ref|XP_003927381.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Saimiri
boliviensis boliviensis]
gi|410040278|ref|XP_003950776.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pan troglodytes]
gi|426351654|ref|XP_004043346.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Gorilla
gorilla gorilla]
gi|426351656|ref|XP_004043347.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Gorilla
gorilla gorilla]
gi|426351658|ref|XP_004043348.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Gorilla
gorilla gorilla]
gi|426351660|ref|XP_004043349.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 4 [Gorilla
gorilla gorilla]
gi|74751050|sp|Q8N6D2.1|RN182_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|21040537|gb|AAH30666.1| Ring finger protein 182 [Homo sapiens]
gi|29477067|gb|AAH50030.1| RNF182 protein [Homo sapiens]
gi|119575753|gb|EAW55349.1| ring finger protein 182, isoform CRA_a [Homo sapiens]
gi|119575754|gb|EAW55350.1| ring finger protein 182, isoform CRA_a [Homo sapiens]
gi|123983246|gb|ABM83364.1| ring finger protein 182 [synthetic construct]
gi|123983258|gb|ABM83370.1| ring finger protein 182 [synthetic construct]
gi|123997945|gb|ABM86574.1| ring finger protein 182 [synthetic construct]
gi|123997947|gb|ABM86575.1| ring finger protein 182 [synthetic construct]
gi|189054925|dbj|BAG37909.1| unnamed protein product [Homo sapiens]
gi|208968733|dbj|BAG74205.1| ring finger protein 182 [synthetic construct]
gi|410214226|gb|JAA04332.1| ring finger protein 182 [Pan troglodytes]
gi|410265344|gb|JAA20638.1| ring finger protein 182 [Pan troglodytes]
gi|410355747|gb|JAA44477.1| ring finger protein 182 [Pan troglodytes]
Length = 247
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|440908669|gb|ELR58664.1| Putative E3 ubiquitin-protein ligase SH3RF1 [Bos grunniens mutus]
Length = 795
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D + K+LPC HT C CL I S+ LRCP CR T+
Sbjct: 9 LLECPVCLERLDA---SAKVLPCQHTFCKRCLLGIVGSRNE----LRCPECR---TLVGS 58
Query: 90 GVAALPPSFLVNQLLD 105
GV LP + L+ +LLD
Sbjct: 59 GVEQLPSNILLVRLLD 74
>gi|387019695|gb|AFJ51965.1| e3 ubiquitin-protein ligase RNF152-like [Crotalus adamanteus]
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+ L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDILLECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVVAVIAIPHTSEHTPVFIKL 94
>gi|332228803|ref|XP_003263580.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Nomascus
leucogenys]
gi|332228805|ref|XP_003263581.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Nomascus
leucogenys]
Length = 247
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|74004095|ref|XP_545347.2| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Canis lupus
familiaris]
Length = 247
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|348536016|ref|XP_003455493.1| PREDICTED: midline-1-like [Oreochromis niloticus]
Length = 669
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S + +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILISHCTPSEPIQSISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
IT+ + G+ L + + ++D
Sbjct: 61 YVITLNQRGLEGLKRNVTLQNIID 84
>gi|388454462|ref|NP_001253109.1| ring finger protein 182 [Macaca mulatta]
gi|402865866|ref|XP_003897125.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Papio
anubis]
gi|402865868|ref|XP_003897126.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Papio
anubis]
gi|402865870|ref|XP_003897127.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Papio
anubis]
gi|402865872|ref|XP_003897128.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 4 [Papio
anubis]
gi|402865874|ref|XP_003897129.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 5 [Papio
anubis]
gi|355561333|gb|EHH17965.1| E3 ubiquitin-protein ligase RNF182 [Macaca mulatta]
gi|355748244|gb|EHH52727.1| E3 ubiquitin-protein ligase RNF182 [Macaca fascicularis]
gi|380784933|gb|AFE64342.1| E3 ubiquitin-protein ligase RNF182 [Macaca mulatta]
Length = 247
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|149731973|ref|XP_001495902.1| PREDICTED: e3 ubiquitin-protein ligase RNF182-like [Equus
caballus]
Length = 247
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|260794846|ref|XP_002592418.1| hypothetical protein BRAFLDRAFT_67284 [Branchiostoma floridae]
gi|229277637|gb|EEN48429.1| hypothetical protein BRAFLDRAFT_67284 [Branchiostoma floridae]
Length = 641
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL A +++ CP CR Q+ + G
Sbjct: 18 LSCSICLELFT----RPKVLPCQHTFCQDCLHDHAGARS----PFLCPNCRLQVNLSPLG 69
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + +V+ L + + Q
Sbjct: 70 VAGLPDNHIVSSLCERLGSQ 89
>gi|402909479|ref|XP_003917445.1| PREDICTED: midline-1-like [Papio anubis]
Length = 221
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|260833366|ref|XP_002611628.1| hypothetical protein BRAFLDRAFT_117133 [Branchiostoma floridae]
gi|229296999|gb|EEN67638.1| hypothetical protein BRAFLDRAFT_117133 [Branchiostoma floridae]
Length = 757
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE-TGTLRCPICREQITIP 87
S L C C +Y P++L C HT C CL Q E GT+ CP+C + +P
Sbjct: 24 SLLVCQLCERLYK----QPRILSCLHTFCHKCLQYEVLKQGGEGQGTMACPVCAQHTALP 79
Query: 88 RGGVAALPPSFLVNQL 103
R G+A+LP + ++ ++
Sbjct: 80 R-GIASLPDNHVITKM 94
>gi|21748764|dbj|BAC03481.1| unnamed protein product [Homo sapiens]
Length = 247
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|432102712|gb|ELK30193.1| Midline-1 [Myotis davidii]
Length = 357
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|432093677|gb|ELK25656.1| E3 ubiquitin-protein ligase RNF182 [Myotis davidii]
Length = 246
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLCKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|156400090|ref|XP_001638833.1| predicted protein [Nematostella vectensis]
gi|156225957|gb|EDO46770.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS--------------RIAASQTRETGTLRC 77
TCG C ++ PKLL CSHT+C C+S I + + + +C
Sbjct: 16 TCGVCQEEFNEKTRVPKLLHCSHTLCKACVSALLGGGRGMYREMNSILYGRANDHDSFKC 75
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDL-----MSRQRRHIIPKCS 119
P C + +G V LP + + +LLD +++ + ++ KC
Sbjct: 76 PFCNARQVTEQGNVDNLPNNLTILRLLDFTEGNQAAKELKKMVEKCK 122
>gi|397521162|ref|XP_003830670.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan paniscus]
Length = 402
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I G+ +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSITEITPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|348566009|ref|XP_003468795.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Cavia
porcellus]
Length = 247
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKILDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|47211208|emb|CAF90165.1| unnamed protein product [Tetraodon nigroviridis]
Length = 276
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C YD PKLL C H VC CL ++ + + T+ CP CR++ +P
Sbjct: 31 LECKICYNGYDSHSRKPKLLGCLHRVCAQCLKKMVTTGESSSSTVTCPFCRQETHVPEDE 90
Query: 91 V 91
V
Sbjct: 91 V 91
>gi|332818244|ref|XP_003310122.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan troglodytes]
Length = 402
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
P CR I G+ +LP +F + +++ ++ I C H Q
Sbjct: 57 PNCRSITEITPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQ 103
>gi|260825383|ref|XP_002607646.1| hypothetical protein BRAFLDRAFT_84665 [Branchiostoma floridae]
gi|229292994|gb|EEN63656.1| hypothetical protein BRAFLDRAFT_84665 [Branchiostoma floridae]
Length = 636
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA------ASQTRETGTLRCPI 79
F E +LTC CL Y + + LPC H CL CL +T + C I
Sbjct: 17 FLERYLTCTICLEPY---KMNIEALPCKHIFCLGCLEGQHNKWLEDCRRTPDQEPFGCSI 73
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
C+ T+P GVA LP + LV L + S++
Sbjct: 74 CQTPATLPSKGVAGLPDNHLVANLCEEFSKK 104
>gi|327280209|ref|XP_003224845.1| PREDICTED: e3 ubiquitin-protein ligase RNF152-like isoform 1
[Anolis carolinensis]
gi|327280211|ref|XP_003224846.1| PREDICTED: e3 ubiquitin-protein ligase RNF152-like isoform 2
[Anolis carolinensis]
Length = 203
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+ L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 6 QDILLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR----- 55
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQIKKL 128
G+ LPP F V+QL D IP S H KL
Sbjct: 56 ---GITKLPPGFSVSQLPDDPEVIAVIAIPHTSEHTPVFIKL 94
>gi|410913569|ref|XP_003970261.1| PREDICTED: probable E3 ubiquitin-protein ligase MID2-like isoform 2
[Takifugu rubripes]
Length = 693
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSSSKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ G+ L + + ++D +
Sbjct: 61 YVITLNHRGLEGLKRNVTLQNIIDRFQK 88
>gi|432927907|ref|XP_004081086.1| PREDICTED: tripartite motif-containing protein 55-like [Oryzias
latipes]
Length = 356
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 20/114 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-----TRET---GTLRCPI 79
E L C CL ++ +LPC H +C C + S TR G RCP
Sbjct: 5 EKQLICPICLELFT---KPVVILPCQHNLCRKCANDFFQSSNPYLSTRTASSGGRFRCPS 61
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQ 124
CR ++ + R GV L + LV ++D+ +Q R+ P C H +
Sbjct: 62 CRHEVVLDRHGVYGLQRNLLVENIIDMFKQQSSSSTLAPERKEETPMCDVHEDE 115
>gi|410913571|ref|XP_003970262.1| PREDICTED: probable E3 ubiquitin-protein ligase MID2-like isoform 3
[Takifugu rubripes]
Length = 694
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSSSKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ G+ L + + ++D +
Sbjct: 61 YVITLNHRGLEGLKRNVTLQNIIDRFQK 88
>gi|348514219|ref|XP_003444638.1| PREDICTED: probable E3 ubiquitin-protein ligase MID2-like
[Oreochromis niloticus]
Length = 699
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSTSKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ G+ L + + ++D +
Sbjct: 61 YVITLNHRGLEGLKRNVTLQNIIDRFQK 88
>gi|31565626|gb|AAH53704.1| Mid1 protein [Mus musculus]
Length = 445
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT + G+ L + + ++D +
Sbjct: 61 HVITPSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|47225230|emb|CAG09730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 574
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL------RCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S + L +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSSSKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ G+ L + + ++D +
Sbjct: 61 YVITLNHRGLEGLKRNVTLQNIIDRFQK 88
>gi|148233096|ref|NP_001091534.1| E3 ubiquitin-protein ligase SH3RF1 [Bos taurus]
gi|189046709|sp|A5D7F8.1|SH3R1_BOVIN RecName: Full=E3 ubiquitin-protein ligase SH3RF1; AltName:
Full=Plenty of SH3s; Short=Protein POSH; AltName:
Full=SH3 domain-containing RING finger protein 1
gi|146186619|gb|AAI40540.1| SH3RF1 protein [Bos taurus]
Length = 840
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D + K+LPC HT C CL I S+ LRCP CR T+
Sbjct: 9 LLECPVCLERLDA---SAKVLPCQHTFCKRCLLGIVGSRNE----LRCPECR---TLVGS 58
Query: 90 GVAALPPSFLVNQLLD 105
GV LP + L+ +LLD
Sbjct: 59 GVEQLPSNILLVRLLD 74
>gi|47224983|emb|CAF97398.1| unnamed protein product [Tetraodon nigroviridis]
Length = 308
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-------TLRCPIC 80
E LTC C ++ P++LPCSHT C +CL + + L+CP C
Sbjct: 5 EEDLTCSVCYSLFSD----PRVLPCSHTFCKNCLDNLLKVSNDNSSLWRPLRPPLKCPNC 60
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
R + +P G+ ALP S + +++ P C H+ +
Sbjct: 61 RTLVELPLAGLEALPSSVSLRAIVEKYQVDGHPRPPCCQEHHRE 104
>gi|268563703|ref|XP_002638910.1| Hypothetical protein CBG22136 [Caenorhabditis briggsae]
Length = 306
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR-------CPICR 81
C CL YDG HTPK+L C+HTVC C++ + R L CPICR
Sbjct: 18 ACQVCLEPYDGKLHTPKILQCAHTVCQSCMNALEEQGRRRVPNLEQTMVSVSCPICR 74
>gi|341902410|gb|EGT58345.1| hypothetical protein CAEBREN_10572 [Caenorhabditis brenneri]
Length = 285
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 31 LTCGTCLCMYDGG--EHTPKLL-PCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
L C C + G TP++L C H++C CL ++ SQ G + CP C ++ +P
Sbjct: 180 LECNVCFKRFKGSSKRRTPRILTSCGHSLCHKCLETLSGSQ----GYVICPTCMKKTVVP 235
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRR 112
GGV L +++ LL+ + ++R
Sbjct: 236 VGGVKMLQKNYIALGLLEEIDGKKR 260
>gi|350595512|ref|XP_003484122.1| PREDICTED: midline-1-like isoform 1 [Sus scrofa]
gi|350595514|ref|XP_003484123.1| PREDICTED: midline-1-like isoform 2 [Sus scrofa]
Length = 246
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ + G+ L + + ++D +
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQK 88
>gi|291237190|ref|XP_002738518.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 739
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++FNE+ L C C Y ++LPC H+ C C+ ++AA + T+ CP CR
Sbjct: 10 DEFNENSLICAICSERY----RDARILPCLHSFCEQCIGKLAAKAGGK--TVLCPTCRRG 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+ G+A++P + + +L L+ +R
Sbjct: 64 HDLT-DGLASIPKNLFLTELAGLIENER 90
>gi|410958471|ref|XP_003985841.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Felis catus]
Length = 247
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYHRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>gi|410928446|ref|XP_003977611.1| PREDICTED: tripartite motif-containing protein 55-like [Takifugu
rubripes]
Length = 484
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 49 LLPCSHTVCLHCLSRIAASQTRET---GTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
+LPC H +C C +++ ++T T G RCP CR+++ + R GV L + LV ++D
Sbjct: 47 ILPCQHNLCRKCANQLYQARTTMTVNSGHFRCPSCRQEVVLDRHGVYGLQRNLLVESIID 106
Query: 106 LMSRQ 110
+ +++
Sbjct: 107 IYNQE 111
>gi|410922549|ref|XP_003974745.1| PREDICTED: uncharacterized protein LOC101064877 [Takifugu rubripes]
Length = 321
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C ++ PK+L C HT CL CL+RI ++ + T++CP+CR +P G
Sbjct: 147 LECAVCFSQFNNVFRCPKMLQCRHTFCLECLARINV-KSAQPSTIQCPLCRGVTMLPALG 205
Query: 91 VAAL 94
+ L
Sbjct: 206 LPRL 209
>gi|410913573|ref|XP_003970263.1| PREDICTED: probable E3 ubiquitin-protein ligase MID2-like isoform 4
[Takifugu rubripes]
Length = 728
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSSSKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ G+ L + + ++D +
Sbjct: 61 YVITLNHRGLEGLKRNVTLQNIIDRFQK 88
>gi|410913567|ref|XP_003970260.1| PREDICTED: probable E3 ubiquitin-protein ligase MID2-like isoform 1
[Takifugu rubripes]
Length = 727
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCSSSKPLESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR 109
IT+ G+ L + + ++D +
Sbjct: 61 YVITLNHRGLEGLKRNVTLQNIIDRFQK 88
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.133 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,827,942,743
Number of Sequences: 23463169
Number of extensions: 64226767
Number of successful extensions: 154225
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 3952
Number of HSP's that attempted gapping in prelim test: 149787
Number of HSP's gapped (non-prelim): 5540
length of query: 129
length of database: 8,064,228,071
effective HSP length: 95
effective length of query: 34
effective length of database: 10,130,194,312
effective search space: 344426606608
effective search space used: 344426606608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)