BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11858
(267 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340713996|ref|XP_003395519.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Bombus terrestris]
Length = 702
Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 151/174 (86%), Positives = 160/174 (91%), Gaps = 2/174 (1%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 17 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 76
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGVAALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 77 TRETGAFRCPICRELITIPRGGVAALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 136
Query: 129 CETCDTVFCLQCTGGSNHSSTS-GDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG NH+ TS G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 137 CETCDTVFCTVCTGG-NHAGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 189
>gi|350400611|ref|XP_003485898.1| PREDICTED: tripartite motif-containing protein 2-like [Bombus
impatiens]
Length = 932
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 151/174 (86%), Positives = 160/174 (91%), Gaps = 2/174 (1%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 247 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 306
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGVAALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 307 TRETGAFRCPICRELITIPRGGVAALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 366
Query: 129 CETCDTVFCLQCTGGSNHSSTS-GDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG NH+ TS G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 367 CETCDTVFCTVCTGG-NHAGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 419
>gi|340713994|ref|XP_003395518.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Bombus terrestris]
Length = 927
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/174 (86%), Positives = 160/174 (91%), Gaps = 2/174 (1%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 242 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 301
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGVAALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 302 TRETGAFRCPICRELITIPRGGVAALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 361
Query: 129 CETCDTVFCLQCTGGSNHSSTS-GDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG NH+ TS G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 362 CETCDTVFCTVCTGG-NHAGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 414
>gi|328780417|ref|XP_392730.4| PREDICTED: tripartite motif-containing protein 2-like [Apis
mellifera]
Length = 927
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/174 (86%), Positives = 159/174 (91%), Gaps = 2/174 (1%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 242 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 301
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 302 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 361
Query: 129 CETCDTVFCLQCTGGSNHSSTS-GDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG NH+ TS G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 362 CETCDTVFCTVCTGG-NHAGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 414
>gi|380025130|ref|XP_003696332.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2-like [Apis florea]
Length = 927
Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/174 (86%), Positives = 159/174 (91%), Gaps = 2/174 (1%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 242 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 301
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 302 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 361
Query: 129 CETCDTVFCLQCTGGSNHSSTS-GDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG NH+ TS G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 362 CETCDTVFCTVCTGG-NHAGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 414
>gi|383862071|ref|XP_003706507.1| PREDICTED: tripartite motif-containing protein 2-like [Megachile
rotundata]
Length = 936
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 150/174 (86%), Positives = 159/174 (91%), Gaps = 2/174 (1%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDGGEHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 251 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGGEHTPKLLPCSHTVCLHCLTRIAASQ 310
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 311 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 370
Query: 129 CETCDTVFCLQCTGGSNHSSTS-GDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG NH+ TS G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 371 CETCDTVFCTVCTGG-NHTGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 423
>gi|307203608|gb|EFN82637.1| Chymotrypsin-1 [Harpegnathos saltator]
Length = 987
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 158/173 (91%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 302 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 361
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGV+ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 362 TRETGAFRCPICRELITIPRGGVSALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 421
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG++ ++ G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 422 CETCDTVFCTVCTGGTHAGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 474
>gi|91092518|ref|XP_969733.1| PREDICTED: similar to NHL (ring finger b-box coiled coil) domain
containing family member (nhl-3) [Tribolium castaneum]
gi|270012903|gb|EFA09351.1| hypothetical protein TcasGA2_TC001677 [Tribolium castaneum]
Length = 685
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 157/173 (90%), Gaps = 1/173 (0%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S NSTLVETVSINYEDFNESFLTCGTCLCMYDG EHTPKLL CSHTVCLHCL++IAASQ
Sbjct: 2 VSMNSTLVETVSINYEDFNESFLTCGTCLCMYDGNEHTPKLLQCSHTVCLHCLTKIAASQ 61
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TR+TG+ RCPICRE ITIPRGGV+ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 62 TRDTGSFRCPICRELITIPRGGVSALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 121
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CT GS H+ T+ EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 122 CETCDTVFCTLCTEGS-HNDTTNSCEHTIIPFSIAIKRMSEILLYKANECISK 173
>gi|211065505|ref|NP_001127784.2| tripartite motif-containing 2 protein-like [Nasonia vitripennis]
Length = 700
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/173 (83%), Positives = 155/173 (89%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 15 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 74
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRE G RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 75 TREAGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 134
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTGG++ + G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 135 CETCDTVFCTVCTGGNHAGALPGCTEHTIIPFSIAIKRMSEILLYKANECISK 187
>gi|307180992|gb|EFN68766.1| Tripartite motif-containing protein 2 [Camponotus floridanus]
Length = 687
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/173 (83%), Positives = 156/173 (90%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+S +S LVETVSINYEDFNESFLTCGTCLC+YDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 2 VSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 61
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TRETG RCPICRE ITIPRGGV ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 62 TRETGAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLF 121
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CT G++ ++ G +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 122 CETCDTVFCTVCTSGTHAGTSPGCTEHTIIPFSIAIKRMSEILLYKANECISK 174
>gi|242022977|ref|XP_002431913.1| RING finger-containing protein, putative [Pediculus humanus
corporis]
gi|212517257|gb|EEB19175.1| RING finger-containing protein, putative [Pediculus humanus
corporis]
Length = 687
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 157/173 (90%), Gaps = 3/173 (1%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ 68
+ +STLVETVSINYEDFNESFLTCGTCLCMYDG EHTPKLLPCSHTVCLHCL+RIAASQ
Sbjct: 2 IGMSSTLVETVSINYEDFNESFLTCGTCLCMYDGSEHTPKLLPCSHTVCLHCLTRIAASQ 61
Query: 69 TRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF 128
TR+ GT RCPICR+ ITIPRGGV+ALPPSFLVNQLLDLMSRQRR +IPKCS H +QELLF
Sbjct: 62 TRDNGTFRCPICRKLITIPRGGVSALPPSFLVNQLLDLMSRQRREVIPKCSIHLTQELLF 121
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
CETCDTVFC CTG + HSS+ +EHTIIPFSIAIKRMSEILLYKANEC+SK
Sbjct: 122 CETCDTVFCSLCTGSTGHSSS---NEHTIIPFSIAIKRMSEILLYKANECISK 171
>gi|357612543|gb|EHJ68051.1| tripartite motif-containing 2 protein-like protein [Danaus
plexippus]
Length = 678
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 137/172 (79%), Positives = 151/172 (87%), Gaps = 3/172 (1%)
Query: 10 STNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT 69
S +STLVETVSINYEDFNESFLTCGTCLC YDGGEHTPKLLPCSHTVCLHCL+RIAASQT
Sbjct: 3 SMSSTLVETVSINYEDFNESFLTCGTCLCTYDGGEHTPKLLPCSHTVCLHCLTRIAASQT 62
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFC 129
R+ G+ RCPICRE ITIPRGGV ALPPSFLVNQLLDLM+RQRR +IP+CS+H +ELLFC
Sbjct: 63 RDAGSFRCPICRELITIPRGGVPALPPSFLVNQLLDLMARQRREVIPQCSSHPGRELLFC 122
Query: 130 ETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
ETCD VFC C G HS T D HT++PFSIA+KRMSEILLY+ANEC+SK
Sbjct: 123 ETCDCVFCRHCADGP-HSDTPCD--HTVVPFSIALKRMSEILLYRANECLSK 171
>gi|443724778|gb|ELU12631.1| hypothetical protein CAPTEDRAFT_185576 [Capitella teleta]
Length = 678
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 119/167 (71%), Positives = 141/167 (84%), Gaps = 3/167 (1%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
STLVETVSI+YEDFNESFLTCGTCLC+YD +H PK+LPCSHTVC CL RI +Q +
Sbjct: 3 STLVETVSIDYEDFNESFLTCGTCLCIYDSQQHNPKILPCSHTVCRSCLERIVEAQGTDN 62
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETC 132
+ RCPICRE I+IPRGGV +LPPSF+VNQL+DLM+RQRR +IPKC+ H+S+EL+FCETC
Sbjct: 63 -SFRCPICRETISIPRGGVVSLPPSFIVNQLIDLMARQRRDVIPKCAVHSSEELMFCETC 121
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECV 179
DTVFC+ CTGGS++ G S HT+IPFSIAIKRMSEILLYKA C+
Sbjct: 122 DTVFCVDCTGGSHNG--RGASAHTVIPFSIAIKRMSEILLYKATLCM 166
>gi|427793477|gb|JAA62190.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 689
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 137/179 (76%), Gaps = 7/179 (3%)
Query: 11 TNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQT 69
T+STLVETVS+NYEDF+E+FLTC TCLC YDG E +PKLL CSHTVC CL R+ AA+++
Sbjct: 10 TSSTLVETVSLNYEDFSENFLTCSTCLCTYDGQERSPKLLSCSHTVCRSCLERLAAAARS 69
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ-ELLF 128
+ GTLRCPICRE + +P GV ALPPSFLVNQLLDL++ +RR ++PKC+ H + ELLF
Sbjct: 70 QHEGTLRCPICREAVPLPEPGVGALPPSFLVNQLLDLVASRRREVVPKCALHPAGPELLF 129
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
CE CD VFC C G ++ DS HT++PFSIA+KRMSEILLYK+ C+SK E
Sbjct: 130 CEACDQVFCSTCLGPAH-----ADSSHTVVPFSIAVKRMSEILLYKSQLCLSKLDAAAE 183
>gi|324503424|gb|ADY41491.1| Tripartite motif-containing protein 2 [Ascaris suum]
Length = 693
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 124/169 (73%), Gaps = 5/169 (2%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-QTRE 71
STLVETV+IN EDF+ESFLTC TCLC YD + KLLPCSHTVCL CL R+A Q E
Sbjct: 3 STLVETVNINLEDFSESFLTCATCLCTYDQEKRRAKLLPCSHTVCLRCLERMAQMPQVLE 62
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCET 131
TGT+RCP+CRE +P GG P SFL+NQLLDLM +QRR ++P C+ H ++LL+CE
Sbjct: 63 TGTMRCPMCREMAMLPVGGANGFPSSFLINQLLDLMQKQRRDVVPNCAVHQQEQLLYCEA 122
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVS 180
CD VFCL C S S SEHT++PFSIAIKRMSEI+++K +CV+
Sbjct: 123 CDLVFCLHCDAPSTRSC----SEHTVVPFSIAIKRMSEIVVFKVKQCVA 167
>gi|328717732|ref|XP_003246291.1| PREDICTED: hypothetical protein LOC100569367 [Acyrthosiphon pisum]
Length = 796
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 143/224 (63%), Gaps = 51/224 (22%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT----- 69
LVETVSI+Y+DFN++FLTC TCLC+YDG E PKLLPCSHTVC+HCL+RIAA+
Sbjct: 19 LVETVSIDYDDFNDAFLTCATCLCVYDGVERAPKLLPCSHTVCVHCLTRIAAAANNRRTT 78
Query: 70 ------RETG--------------------TLRCPICREQITIPR-GGVAALPPSFLVNQ 102
R +G T RCPICRE I +P+ GGV ALPPSFLVNQ
Sbjct: 79 QDLNNGRGSGSNTIQSQQQQESQTAQQQRQTFRCPICRELIVVPQNGGVTALPPSFLVNQ 138
Query: 103 LLDLMSRQRRH-IIPKC------STHNSQELLFCETCDTVFCLQCT-------GGSNHSS 148
LLDL+S RR +IP C S+H +QELL+CETCD VFC CT GG+ SS
Sbjct: 139 LLDLISTHRRRTLIPTCCGGGVLSSHINQELLYCETCDQVFCSVCTKHETAIGGGTLISS 198
Query: 149 TSGDSEHTIIPFSIAIKRMSEILLYKANECVSK-----NKVCPE 187
S HTIIP S+A+KR SEI+LYKANECVSK + VC E
Sbjct: 199 KSPPLVHTIIPVSVAMKRTSEIMLYKANECVSKLNCSRDGVCAE 242
>gi|312085321|ref|XP_003144632.1| nhl domain-containing protein 3 [Loa loa]
gi|307760204|gb|EFO19438.1| nhl domain-containing protein 3 [Loa loa]
Length = 704
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 123/169 (72%), Gaps = 5/169 (2%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRE 71
ST +ETV+IN EDF+E+FLTC TCLC YD KLL CSHTVCL CL R+ Q E
Sbjct: 10 STFIETVNINLEDFSETFLTCATCLCTYDQERKKAKLLSCSHTVCLECLLRMEQLPQVIE 69
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCET 131
TG +RCP+CRE IT+P G A P SFL+NQLLDLM +Q + +IP CS H ++LL+CE
Sbjct: 70 TGIVRCPLCREMITLPSDGSNAFPSSFLINQLLDLMQKQHKDVIPNCSIHQQEQLLYCEA 129
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVS 180
CD VFC C + ST G S+HT+IPFSIAIKR+SEI++YKAN+CV+
Sbjct: 130 CDLVFCQHC----DSLSTRGCSDHTVIPFSIAIKRLSEIVVYKANQCVA 174
>gi|268534176|ref|XP_002632218.1| C. briggsae CBR-NHL-3 protein [Caenorhabditis briggsae]
Length = 405
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 121/169 (71%), Gaps = 4/169 (2%)
Query: 8 TLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS 67
T +T+++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL+C++++A
Sbjct: 5 TTTTSTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLYCVTQLAEL 64
Query: 68 QTRETG-TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL 126
T+RCP+CRE IP GGV A P +F +NQLLD+M RQR+ ++P CS H S +L
Sbjct: 65 APETIPPTIRCPLCREICAIPHGGVIAFPAAFFINQLLDVMQRQRKDVVPSCSNHPSDQL 124
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKA 175
L+CETCD VFC C + EHT++P SIAIKRMSEI++Y+A
Sbjct: 125 LYCETCDLVFCEHCQSSVINKKC---DEHTVVPLSIAIKRMSEIVVYRA 170
>gi|308487146|ref|XP_003105769.1| CRE-NHL-3 protein [Caenorhabditis remanei]
gi|308255225|gb|EFO99177.1| CRE-NHL-3 protein [Caenorhabditis remanei]
Length = 691
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 122/168 (72%), Gaps = 4/168 (2%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-S 67
++T+++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL+C++++A S
Sbjct: 1 MTTSTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLYCVTQLAGLS 60
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
TLRCP+CRE IP GGV + P +F +NQLLD+M RQR+ ++P CS H S +LL
Sbjct: 61 AETIPPTLRCPLCREICPIPAGGVISFPAAFFINQLLDVMQRQRKDVVPSCSNHPSDQLL 120
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKA 175
+CETCD VFC C + EHT++P SIAIKRMSEI++Y+A
Sbjct: 121 YCETCDLVFCEHCQTSVINKKC---DEHTVVPLSIAIKRMSEIVVYRA 165
>gi|358337517|dbj|GAA55865.1| tripartite motif-containing protein 2/3 [Clonorchis sinensis]
Length = 969
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 128/201 (63%), Gaps = 33/201 (16%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
S LVETV IN +DF +SFLTCGTC YD E KLLPCSHTVC CL RI +Q++ T
Sbjct: 14 SRLVETVMINVDDFADSFLTCGTCFTGYDTCERAAKLLPCSHTVCRSCLDRILETQSQAT 73
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETC 132
+LRCPICRE I +P GG ++ PP+F+VNQLLDL++ QRR ++PKC H +QELLFCETC
Sbjct: 74 -SLRCPICREDIPVPAGGASSFPPAFIVNQLLDLLATQRRDVVPKCRIHPNQELLFCETC 132
Query: 133 DTVFCLQCTGGSN--HSS----------------------------TSGDS--EHTIIPF 160
D VFC +C G S+ HSS TSG S H +I F
Sbjct: 133 DVVFCTECRGRSHAAHSSGCESLSDCDTANVPLCLSNEHSGVGTPTTSGTSALNHNVISF 192
Query: 161 SIAIKRMSEILLYKANECVSK 181
++AIKR +EI+LYK + C+ +
Sbjct: 193 NVAIKRCTEIMLYKMHLCIQE 213
>gi|170590850|ref|XP_001900184.1| Nhl domain containing protein 3 [Brugia malayi]
gi|158592334|gb|EDP30934.1| Nhl domain containing protein 3, putative [Brugia malayi]
Length = 678
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 123/198 (62%), Gaps = 6/198 (3%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQI 84
F+E+FLTC TCLC YD + KLL CSHTVCL CL + Q ETG +RCP+CRE I
Sbjct: 22 FSETFLTCATCLCTYDQEQKKAKLLSCSHTVCLECLLHMEQLPQVIETGVVRCPLCREMI 81
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGS 144
TIP GG A P SFL+NQLLDLM +QR+ ++P CS H ++LL+CE CD VFC C
Sbjct: 82 TIPSGGSNAFPSSFLINQLLDLMQKQRKDVVPNCSVHQQEQLLYCEACDLVFCQHC---- 137
Query: 145 NHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC-VSKNKVCPERKSNLRPSAHKADAYV 203
+ ST S+HT+IPFSIAIKR+SEI++YKAN+C VS N K D V
Sbjct: 138 DSLSTRDCSDHTVIPFSIAIKRLSEIVVYKANQCVVSLNTAAANVKFETLQLDRNVDNVV 197
Query: 204 RRRGAHTQTPPLFSHGLS 221
A Q FS +S
Sbjct: 198 DGLNASFQLECRFSGNMS 215
>gi|341896875|gb|EGT52810.1| CBN-NHL-3 protein [Caenorhabditis brenneri]
Length = 691
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 121/168 (72%), Gaps = 4/168 (2%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-S 67
+S +++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL C++++A S
Sbjct: 1 MSASTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLSCVTQLAELS 60
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
T+RCP+CRE TIP GGV + P +F +NQLLD+M RQR+ ++P CS H S +LL
Sbjct: 61 PETVPPTVRCPLCREICTIPAGGVISFPAAFFINQLLDVMQRQRKDVVPSCSNHPSDQLL 120
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKA 175
+CETCD VFC C + EHT++P SIAIKRMSEI++Y+A
Sbjct: 121 YCETCDLVFCEHCQTSVINKKC---DEHTVVPLSIAIKRMSEIVVYRA 165
>gi|241998980|ref|XP_002434133.1| RING finger-containing protein, putative [Ixodes scapularis]
gi|215495892|gb|EEC05533.1| RING finger-containing protein, putative [Ixodes scapularis]
Length = 714
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/146 (63%), Positives = 110/146 (75%), Gaps = 7/146 (4%)
Query: 34 GTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQTRETGTLRCPICREQITIPRGGVA 92
GTCLC YDGGE +PKLL CSHTVC CL R+A A+ RE G LRCPICRE + +P GV
Sbjct: 151 GTCLCTYDGGERSPKLLSCSHTVCRSCLERLAVATGAREGGCLRCPICREAVPLPEPGVG 210
Query: 93 ALPPSFLVNQLLDLMSRQRRHIIPKCSTH-NSQELLFCETCDTVFCLQCTGGSNHSSTSG 151
ALPPSFLVNQLLDL++ +RR ++PKC+TH + ELLFCE+CD FC C G ++
Sbjct: 211 ALPPSFLVNQLLDLVASRRREVVPKCATHPGAPELLFCESCDQAFCGVCLGDAH-----A 265
Query: 152 DSEHTIIPFSIAIKRMSEILLYKANE 177
DS HT++PFSIA+KRMSEILLYK E
Sbjct: 266 DSRHTVVPFSIAVKRMSEILLYKGPE 291
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 11 TNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS 67
T STLVETVS+NYEDF+ESFLTC TCLC YDGGE +PKLL CSHT L CL+++ A+
Sbjct: 297 TASTLVETVSLNYEDFSESFLTCSTCLCTYDGGERSPKLLSCSHTAQL-CLNKLDAA 352
>gi|256072193|ref|XP_002572421.1| ring finger-containing [Schistosoma mansoni]
Length = 897
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 123/195 (63%), Gaps = 27/195 (13%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
S LVETV IN +DF ++FLTCGTC Y+ E KLLPCSHT+C CL RI S+T ++
Sbjct: 3 SRLVETVMINVDDFADNFLTCGTCFSGYNSSERAAKLLPCSHTICRSCLDRILTSET-QS 61
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETC 132
T RCPICRE I IP GG A+ PP+F+VNQLLDL++ RR ++PKC H SQELLFCETC
Sbjct: 62 ETFRCPICRENIAIPSGGAASFPPAFIVNQLLDLLATHRRDVVPKCCIHPSQELLFCETC 121
Query: 133 DTVFCLQCTGGS----NH----------------------SSTSGDSEHTIIPFSIAIKR 166
D VFC +C G + NH SS++ H +I F++A+KR
Sbjct: 122 DMVFCSECRGRNHAIQNHLNDSSCLPVNNGNQDITTQVESSSSNTGLNHNVITFNVALKR 181
Query: 167 MSEILLYKANECVSK 181
SEI+LYK + C +
Sbjct: 182 CSEIMLYKMHLCTQE 196
>gi|353230193|emb|CCD76364.1| putative ring finger-containing [Schistosoma mansoni]
Length = 897
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 123/195 (63%), Gaps = 27/195 (13%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
S LVETV IN +DF ++FLTCGTC Y+ E KLLPCSHT+C CL RI S+T ++
Sbjct: 3 SRLVETVMINVDDFADNFLTCGTCFSGYNSSERAAKLLPCSHTICRSCLDRILTSET-QS 61
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETC 132
T RCPICRE I IP GG A+ PP+F+VNQLLDL++ RR ++PKC H SQELLFCETC
Sbjct: 62 ETFRCPICRENIAIPSGGAASFPPAFIVNQLLDLLATHRRDVVPKCCIHPSQELLFCETC 121
Query: 133 DTVFCLQCTGGS----NH----------------------SSTSGDSEHTIIPFSIAIKR 166
D VFC +C G + NH SS++ H +I F++A+KR
Sbjct: 122 DMVFCSECRGRNHAIQNHLNDSSCLPVNNGNQDITTQVESSSSNTGLNHNVITFNVALKR 181
Query: 167 MSEILLYKANECVSK 181
SEI+LYK + C +
Sbjct: 182 CSEIMLYKMHLCTQE 196
>gi|392888962|ref|NP_001040817.2| Protein NHL-3, isoform a [Caenorhabditis elegans]
gi|351064887|emb|CCD73637.1| Protein NHL-3, isoform a [Caenorhabditis elegans]
Length = 698
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 119/168 (70%), Gaps = 4/168 (2%)
Query: 9 LSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-S 67
+ T+++LVETV+IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL C++++A S
Sbjct: 1 MFTSTSLVETVNINVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLFCVTQLAELS 60
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
+ TLRCP+CRE IP GGV P +F +NQLLD+M QR+ ++P CS H + +LL
Sbjct: 61 PETQPPTLRCPLCREVCPIPAGGVILFPAAFFINQLLDVMQIQRKDVVPSCSNHPTDQLL 120
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKA 175
+CETCD VFC C + EHT++P SIAIKRMSEI++Y+A
Sbjct: 121 YCETCDLVFCENCQDSVVNKKC---DEHTVVPLSIAIKRMSEIVVYRA 165
>gi|402585476|gb|EJW79416.1| hypothetical protein WUBG_09673, partial [Wuchereria bancrofti]
Length = 142
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRE 71
ST +ETV+IN EDF+E+FLTC TCLC YD KLL CSHTVCL CL R+ Q E
Sbjct: 10 STFIETVNINLEDFSETFLTCATCLCTYDQERKKAKLLSCSHTVCLECLLRMEQLPQVIE 69
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCET 131
TG +RCP+CRE ITIP GG A P SFL+NQLLDLM +QR+ ++P CS H ++LL+CE
Sbjct: 70 TGVVRCPLCREMITIPSGGSNAFPSSFLINQLLDLMQKQRKDVVPNCSVHQQEQLLYCEA 129
Query: 132 CDTVFCLQCTGGS 144
CD VFC C S
Sbjct: 130 CDLVFCQHCDSLS 142
>gi|332028671|gb|EGI68705.1| Tripartite motif-containing protein 2 [Acromyrmex echinatior]
Length = 588
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 65/75 (86%)
Query: 107 MSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
MSRQRR +IPKCS H +QELLFCETCDTVFC CT G++ ++ G +EHTIIPFSIAIKR
Sbjct: 1 MSRQRREVIPKCSVHINQELLFCETCDTVFCTVCTSGTHAGTSPGCTEHTIIPFSIAIKR 60
Query: 167 MSEILLYKANECVSK 181
MSEILLYKANEC+SK
Sbjct: 61 MSEILLYKANECISK 75
>gi|260826079|ref|XP_002607993.1| hypothetical protein BRAFLDRAFT_213530 [Branchiostoma floridae]
gi|229293343|gb|EEN64003.1| hypothetical protein BRAFLDRAFT_213530 [Branchiostoma floridae]
Length = 728
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 23/134 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQSCLERLLA--TEPAGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ-----------------RRHIIPKCSTHNSQELL 127
+PR GV L +FLV +L D++ +Q R KC H
Sbjct: 62 ALPRNGVQGLKSNFLVGKLRDILQQQPKGETSEAREDGAASELRERETSKCEDHQELNKF 121
Query: 128 FCETCDTVFCLQCT 141
+C+TC V CL C
Sbjct: 122 YCDTCHRVICLHCV 135
>gi|405972293|gb|EKC37069.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 424
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI------------- 64
++ ++ E F E+FL C C +YD H PKLL C H++CL C+ I
Sbjct: 47 SILVDEESFIETFLKCLICRELYDDAIHPPKLLHCHHSLCLQCILLIFQKEAEYRTSLTP 106
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ 124
A S+ T+ CP CR + G+ LP + QL+D +S R+ C H Q
Sbjct: 107 AYSELPTAVTVICPTCRTNFITTQDGIRELPTDHRIIQLIDFVSHTERYTTDFCPLHKFQ 166
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+ FCE C T C CT +H G HT++ F AIK+ IL
Sbjct: 167 PINFFCERCTTYVCRDCT-IVDHQEALG---HTVVDFEGAIKKYIPIL 210
>gi|260811704|ref|XP_002600562.1| hypothetical protein BRAFLDRAFT_205186 [Branchiostoma floridae]
gi|229285849|gb|EEN56574.1| hypothetical protein BRAFLDRAFT_205186 [Branchiostoma floridae]
Length = 686
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 36/141 (25%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C+ CL A Q L CP CR Q+
Sbjct: 9 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCMECLQEWATKQQ----PLECPTCRTQV 60
Query: 85 TIPRGGVAALPPSFLVNQLLDLMS-----------------------RQRRHIIPKCSTH 121
++P GV L +F VN LLD + ++RH C H
Sbjct: 61 SLPDQGVDGLRTNFYVNNLLDFAAAKKGSEPGVSCQAINTMGGMEGLERKRH----CHKH 116
Query: 122 NSQELLF-CETCDTVFCLQCT 141
+QEL+F CE+C+ + C CT
Sbjct: 117 KNQELVFYCESCNVLVCTACT 137
>gi|260792736|ref|XP_002591370.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
gi|229276575|gb|EEN47381.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
Length = 690
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 39/196 (19%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-------------------CSTHNSQE 125
++P GV L +F VN LLD + + H I C H Q
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKEGHQIVTQENLEASEGVPSSFQRKAFCPKHEDQV 121
Query: 126 LLF-CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKV 184
L F CE C T+ C+ CT NHS GD + + S+A ++ ++ A KV
Sbjct: 122 LTFYCEPCQTLVCVACT-VVNHS--RGDKHNPVEIGSVAERKKRDLQKLLA-------KV 171
Query: 185 CPERKSNLRPSAHKAD 200
P R+ ++R + ++ D
Sbjct: 172 EP-REKDVRDTLNEVD 186
>gi|260816735|ref|XP_002603243.1| hypothetical protein BRAFLDRAFT_93307 [Branchiostoma floridae]
gi|229288561|gb|EEN59254.1| hypothetical protein BRAFLDRAFT_93307 [Branchiostoma floridae]
Length = 877
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 71/161 (44%), Gaps = 52/161 (32%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC CL + P++LPC HT C CL R A Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCLLYF----RDPRVLPCLHTFCKECLQRWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR--------------------------RHIIPK- 117
++P GV L +F VN LLD ++ ++ ++P+
Sbjct: 62 SLPDHGVDGLRGNFYVNNLLDFVAAKKGAQPDCAVLLCEACAKMHCRIPALKEHEVVPQE 121
Query: 118 ----------------CSTHNSQELLF-CETCDTVFCLQCT 141
CS H +QEL F C++C+T+ C CT
Sbjct: 122 AIKTKDDMEKFRRKKHCSKHKNQELAFYCKSCNTLICTACT 162
>gi|260782107|ref|XP_002586133.1| hypothetical protein BRAFLDRAFT_248419 [Branchiostoma floridae]
gi|229271225|gb|EEN42144.1| hypothetical protein BRAFLDRAFT_248419 [Branchiostoma floridae]
Length = 607
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL R+ A++ G L CPICR+ +
Sbjct: 8 EITDEFLVCQICLENF----KQPKVLPCLHTFCQPCLERLLAAEP--VGKLDCPICRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHI------------IP-----KCSTHNSQELL 127
+P GV L +FLV +L D++ +Q + +P KC THN
Sbjct: 62 PLPENGVQGLKSNFLVGKLHDILQQQSKWSAKRGASEPEEDGVPARETSKCETHNELHKF 121
Query: 128 FCETCDTVFCLQCT 141
+C+TC + CL C
Sbjct: 122 YCDTCHRLICLHCV 135
>gi|260809851|ref|XP_002599718.1| hypothetical protein BRAFLDRAFT_249762 [Branchiostoma floridae]
gi|229284999|gb|EEN55730.1| hypothetical protein BRAFLDRAFT_249762 [Branchiostoma floridae]
Length = 275
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF++ FLTC C+ + P++LPC HT C CL Q L CP CR Q
Sbjct: 9 DDFDDQFLTCPVCVLHF----RDPRILPCLHTFCKGCLEEWVTKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS---------RQRRHIIPKCSTHNSQEL-LFCETCD 133
+++P GV L +F VN LLD + R + H C H EL +CE C
Sbjct: 61 VSLPDQGVDGLRANFYVNNLLDFAAAKKGAEPGGRSKFHRKRHCDKHKKYELEFYCEVCK 120
Query: 134 TVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLY-------KANECVSKNKVCP 186
T+ C CT + +H ++ + +R + L + E + K
Sbjct: 121 TLVCTACTVVDHRPG----KDHNLVEIATVAQRKKDTLQGLLQDIDPRLKEIEASVKEVE 176
Query: 187 ERKSNLRPS----AHKADAYVRR 205
SNL PS ++A+AY +
Sbjct: 177 RNMSNLMPSREEATNQANAYFNK 199
>gi|260815579|ref|XP_002602550.1| hypothetical protein BRAFLDRAFT_227285 [Branchiostoma floridae]
gi|229287861|gb|EEN58562.1| hypothetical protein BRAFLDRAFT_227285 [Branchiostoma floridae]
Length = 680
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 31/141 (21%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF++ FL+C C+ + P++LPC HT C CL A Q L CP CR Q
Sbjct: 4 DDFDDQFLSCPVCMLHF----RDPRVLPCLHTFCKGCLKEWATKQQ----PLECPTCRTQ 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-----RHIIPK-----------------CSTH 121
+++P GV L +F VN LLD + ++ ++P+ C H
Sbjct: 56 VSLPEQGVDGLRTNFYVNNLLDFAAAKKGTEPDHELVPQEVMKEKKGVERFQRKRHCQKH 115
Query: 122 NSQELLF-CETCDTVFCLQCT 141
+QEL+F CETC + C CT
Sbjct: 116 KNQELVFYCETCKALVCTACT 136
>gi|260792728|ref|XP_002591366.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
gi|229276571|gb|EEN47377.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
Length = 678
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 21/130 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A+ Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWASKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHI-----IPK-------CSTHNSQELLF-CET 131
++P GV L +F VN LLD + + ++ +P C H Q L F CE
Sbjct: 62 SLPDPGVDGLRTNFYVNNLLDFAAVKEENLEASEDVPSSFQRKAFCPKHADQVLTFYCEP 121
Query: 132 CDTVFCLQCT 141
C T+ C+ CT
Sbjct: 122 CQTLVCVACT 131
>gi|260826075|ref|XP_002607991.1| hypothetical protein BRAFLDRAFT_213581 [Branchiostoma floridae]
gi|229293341|gb|EEN64001.1| hypothetical protein BRAFLDRAFT_213581 [Branchiostoma floridae]
Length = 755
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 32/175 (18%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDF----RQPKVLPCLHTFCQPCLDRLLA--TEPAGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR-----------------HIIPKCSTHNSQELL 127
+P GV L +FLV +L D++ +Q + KC H
Sbjct: 62 PLPENGVQGLKSNFLVGKLRDILQQQPKGETSQAREDAAAAELRARETSKCEDHQELNKF 121
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
+C+TC V CL C + +H + A +R E + KA KN
Sbjct: 122 YCDTCHRVICLHCV-------VTAHKDHQYVEIEKAAEREGEKI--KAKLATVKN 167
>gi|340377925|ref|XP_003387479.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 753
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PK+LPC H+ C HCL + + E CP CR + +P
Sbjct: 14 EERLTCPVCLGHYT----NPKILPCHHSFCQHCLEGLPLDKKSEIYYFFCPTCRRRTKLP 69
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPK---CSTHNSQELLFCETCDTVFCLQCT 141
GV A P +F +N L ++ S ++ + C+ H LFCE CDTV CL C+
Sbjct: 70 EKGVGAFPVAFHLNDLKEMYSLTKKTADLQEAMCNDHGKPLELFCERCDTVICLHCS 126
>gi|122114540|ref|NP_001073637.1| tripartite motif-containing 3b [Danio rerio]
gi|120537370|gb|AAI29040.1| Tripartite motif-containing 3b [Danio rerio]
Length = 748
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 33/165 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----HNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL- 126
+P GVAAL +F + L++++ R P+ C H + +
Sbjct: 69 LPEKGVAALQNNFFITNLMEVLQRDSECSRPEACSVLESVSAAAAGKPLSCPNHEGKVME 128
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL+CT G + EH +P +++ +L
Sbjct: 129 FYCESCETAMCLECTEGEHR-------EHVTVPLRDVLEQHKAVL 166
>gi|260835653|ref|XP_002612822.1| hypothetical protein BRAFLDRAFT_67230 [Branchiostoma floridae]
gi|229298203|gb|EEN68831.1| hypothetical protein BRAFLDRAFT_67230 [Branchiostoma floridae]
Length = 601
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ LTCG CL + TPKLLPC HT C CL R R + CP+CR Q+ IP
Sbjct: 20 DELLTCGICLEDF----KTPKLLPCGHTFCQACLERY----VRGASDMTCPVCRRQVAIP 71
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPK-------CSTHNSQELL-FCETCDTVFCLQ 139
GV ALP +F V + +L+ QRR C+ H E FC+ C C +
Sbjct: 72 PEGVGALPGNFWVGNVRELLRGQRRERRVNVGDTRRLCAVHGDAEFRCFCKDCSQPVCAE 131
Query: 140 C 140
C
Sbjct: 132 C 132
>gi|260809861|ref|XP_002599723.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
gi|229285004|gb|EEN55735.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
Length = 681
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 34/199 (17%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF++ FLTC C+ + P++LPC HT C CL Q L CP CR Q
Sbjct: 9 DDFDDQFLTCPVCMPHF----RDPRILPCLHTFCKGCLEEWVTKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS----------------RQRRHIIPKCSTHNSQEL- 126
+++P GV L +F VN LLD + R + H C H EL
Sbjct: 61 VSLPDQGVDGLKTNFYVNNLLDFAAAKKGAEPEEILKAEEGRSKFHRKRHCDKHKKYELE 120
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI--LLY----KANECVS 180
+CE C T+ C CT +H G + + ++A KR + LL + NE +
Sbjct: 121 FYCEICKTLVCTACT-VVDHR--PGKDHNPVEIATVAQKRKDTLQGLLQDIDPRLNEIEA 177
Query: 181 KNKVCPERKSNLRPSAHKA 199
K + SNL PS +A
Sbjct: 178 SVKEVERKMSNLMPSREEA 196
>gi|47227859|emb|CAG09022.1| unnamed protein product [Tetraodon nigroviridis]
Length = 767
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 33/165 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL- 126
+P GVAAL +F + L++++ R P+ C H + +
Sbjct: 69 LPEKGVAALQNNFFITNLMEVLQRDPECSRPEACNVLESASAATACQPLSCPNHEGKVME 128
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL+CT G + EH +P +++ +L
Sbjct: 129 FYCESCETAMCLECTEGEHR-------EHVTVPLRDVLEQHKSVL 166
>gi|410910292|ref|XP_003968624.1| PREDICTED: tripartite motif-containing protein 3-like [Takifugu
rubripes]
Length = 747
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 33/165 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL- 126
+P GVAAL +F + L++++ R P+ C H + +
Sbjct: 69 LPEKGVAALQNNFFITNLMEVLQRDPECSRPEACNVLESASAATACQPLSCPNHEGKVME 128
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL+CT G + EH +P +++ +L
Sbjct: 129 FYCESCETAMCLECTEGEHR-------EHVTVPLRDVLEQHKSVL 166
>gi|390365340|ref|XP_796849.3| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 753
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 17/128 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL CG CL Y PK+LPC HT C +CL S E+ TL CP+CR+Q
Sbjct: 32 KQIDKQFLVCGICLDRY----KVPKVLPCLHTFCQNCLENYVPS---ESLTLTCPLCRQQ 84
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH---------IIPKCSTHNSQEL-LFCETCD 133
+P GVA L +F + L++++ R + + C++H + L +C+ C+
Sbjct: 85 SIVPERGVAGLQSNFFITNLMEVLERPESNGGGDSPIGDQMLSCASHEGEPLTYYCDNCE 144
Query: 134 TVFCLQCT 141
T C +CT
Sbjct: 145 TAICEECT 152
>gi|260805102|ref|XP_002597426.1| hypothetical protein BRAFLDRAFT_80577 [Branchiostoma floridae]
gi|229282691|gb|EEN53438.1| hypothetical protein BRAFLDRAFT_80577 [Branchiostoma floridae]
Length = 800
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
++ T S+ +EDF+E FLTC C +Y P++LPC HT C CL + +++ T
Sbjct: 75 IMATASLPFEDFDEKFLTCPVCEEIYTD----PRVLPCLHTYCARCLEKWRNGESQFT-- 128
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLD---LMSRQRRHIIPKCSTHNSQELLFCET 131
CP CR Q+ + GV++LPP+F +N LLD L + H + +++ C
Sbjct: 129 --CPTCRHQVRLQGTGVSSLPPNFFINSLLDFRALHKSEEDHTHCQMCKSDAKVEGRCAD 186
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTII 158
C + C C + HS+T +H II
Sbjct: 187 CSFLLCKNCI--TAHSNTPALKDHYII 211
>gi|260824834|ref|XP_002607372.1| hypothetical protein BRAFLDRAFT_69778 [Branchiostoma floridae]
gi|229292719|gb|EEN63382.1| hypothetical protein BRAFLDRAFT_69778 [Branchiostoma floridae]
Length = 1473
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC +T C CL T GT +CPICR+Q+ +P G
Sbjct: 1154 LTCSICLELFT----RPKMLPCQYTFCQDCLQ----DHTGRGGTFQCPICRQQVRLPPKG 1205
Query: 91 VAALPPSFLVNQLLDLMSRQRR---------HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + + + + + Q + +CS H S+E+ LFC+TC C++
Sbjct: 1206 VAGLPDNLMAASMCERLQNQAKLSGEANEQPQPGSRCSFHPSEEVKLFCKTCQMPVCIEL 1265
Query: 141 TGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
H D HT A+++ S +
Sbjct: 1266 CMDEAH-----DDHHTTTIKKAALEKKSVV 1290
>gi|260826067|ref|XP_002607987.1| hypothetical protein BRAFLDRAFT_145376 [Branchiostoma floridae]
gi|229293337|gb|EEN63997.1| hypothetical protein BRAFLDRAFT_145376 [Branchiostoma floridae]
Length = 734
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+L C HT C CL ++ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDF----KQPKVLQCLHTFCQSCLEKLLA--TEPVGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ-------------RRHIIPKCSTHNSQELLFCET 131
+P GV L +FLV +L D++ +Q R KC H +C+T
Sbjct: 62 PLPENGVQGLKSNFLVGKLRDILQQQPKGETSEVREEGLRAMETSKCEDHQELNKFYCDT 121
Query: 132 CDTVFCLQCT 141
C V CL C
Sbjct: 122 CHRVICLHCV 131
>gi|340383447|ref|XP_003390229.1| PREDICTED: hypothetical protein LOC100641189, partial [Amphimedon
queenslandica]
Length = 600
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E LTC CL EH PK+LPC H+ C HCL ++ + T + CP CR I
Sbjct: 14 EEQLTCLICL------EHFTNPKILPCHHSFCEHCLEGLSRVKKNGTYYISCPTCRRSIE 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHI--IPK---CSTHNSQELLFCETCDTVFCLQC 140
+P+GG A P +F +N L + S+ + I K CS H FC+TC TV C C
Sbjct: 68 LPKGGAGAFPVAFTLNNLKEFYSQMKEAADSITKEATCSDHGKPLEFFCDTCATVICSHC 127
>gi|340383445|ref|XP_003390228.1| PREDICTED: RING finger protein nhl-1-like [Amphimedon
queenslandica]
Length = 351
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E LTC CL EH PK+LPC H+ C HCL ++ + T + CP CR I
Sbjct: 14 EEQLTCLICL------EHFTNPKILPCHHSFCEHCLEGLSRVKKNGTYYISCPTCRRSIE 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHII-----PKCSTHNSQELLFCETCDTVFCLQC 140
+P+GG A P +F +N L +L S+ + CS H FC+TC TV C C
Sbjct: 68 LPKGGAGAFPVAFTLNNLKELYSQMKEAADSITREATCSDHGKPLEFFCDTCATVICSHC 127
>gi|405975694|gb|EKC40243.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 497
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRET-------- 72
F E FL C C YD E PK LPC+HT CL CL ++ S+TR
Sbjct: 23 FEEQFLRCHICNEKYDQTERHPKSLPCNHTFCLPCLKQVFDHNQQNSRTRRQITWFDDSY 82
Query: 73 -GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCE 130
G L+CP CR +I + R + +LP V Q++D +S+ C H +Q L FC+
Sbjct: 83 EGVLKCPECRVEIFLRRAEIESLPSDHRVIQMMDFLSQVSAKSQNVCGKHENQPLNFFCK 142
Query: 131 TCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSE 169
C C CT +H G H I+ S A+ E
Sbjct: 143 KCLHPVCRDCT-VLDHKENQG---HNIVDVSDALSESKE 177
>gi|432889748|ref|XP_004075342.1| PREDICTED: tripartite motif-containing protein 3-like [Oryzias
latipes]
Length = 751
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 43/170 (25%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 20 IDKQFLVCSICLDRY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSI 72
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL------------------ 127
+P GVAAL +F + L++++ R P+CS + +L
Sbjct: 73 LPEKGVAALQNNFFITNLMEVLQRD-----PECSRPEASNVLESANAATTCQSLSCPNHE 127
Query: 128 ------FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL+CT G + EH +P +++ L
Sbjct: 128 GKVMEFYCESCETAMCLECTEGEHR-------EHVTVPLRDVLEQHKSAL 170
>gi|260792738|ref|XP_002591371.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
gi|229276576|gb|EEN47382.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
Length = 653
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 63/137 (45%), Gaps = 31/137 (22%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+F+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 NFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLM-------------------SRQRRHIIPKCSTHNSQE 125
++P GV L +F VN LLD S QR+ PK H Q
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKKGAGPENLEASEGVPSSFQRKAFCPK---HEDQV 118
Query: 126 LLF-CETCDTVFCLQCT 141
L F CE C T+ C+ CT
Sbjct: 119 LTFYCEPCQTLVCVACT 135
>gi|348525352|ref|XP_003450186.1| PREDICTED: tripartite motif-containing protein 3-like [Oreochromis
niloticus]
Length = 747
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 43/165 (26%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----HNPKVLPCLHTFCEKCLQNYIPPQSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL------------------ 127
+P GVAAL +F + L++++ R P+CS + +L
Sbjct: 69 LPEKGVAALQNNFFITNLMEVLQRD-----PECSQPEAGNVLESANAATTCQPLSCPNHE 123
Query: 128 ------FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+CE+C+T CL+CT G + EH +P +++
Sbjct: 124 GKVMEFYCESCETAMCLECTEGEHR-------EHVTVPLRDVLEQ 161
>gi|292621594|ref|XP_686295.3| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Danio
rerio]
Length = 754
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 33/165 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 20 IDKQFLVCSICLEHY----HNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSI 72
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRR-----------------HIIP-KCSTHNSQEL- 126
+P GVAAL +F + L++++ R++ + P C H + +
Sbjct: 73 LPEKGVAALQNNFFITNLMEVLQREQDCTRSEASSGLESAGAATYAPPLSCPNHEGKVME 132
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL+CT G + EH +P +++ L
Sbjct: 133 FYCESCETAMCLECTEGEHR-------EHVTVPLRDVLEQHKAAL 170
>gi|260795691|ref|XP_002592838.1| hypothetical protein BRAFLDRAFT_201537 [Branchiostoma floridae]
gi|229278062|gb|EEN48849.1| hypothetical protein BRAFLDRAFT_201537 [Branchiostoma floridae]
Length = 683
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 27/136 (19%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D +E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 8 DLDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 59
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL 126
++P GV L +F VN LLD + ++ H + C H E+
Sbjct: 60 SLPDQGVDGLRTNFYVNNLLDFAAAKKDHNVTTEETLKAEEGMSQFHRKRHCDKHKKYEI 119
Query: 127 -LFCETCDTVFCLQCT 141
+CE C + C CT
Sbjct: 120 EFYCENCTALVCTACT 135
>gi|260794878|ref|XP_002592434.1| hypothetical protein BRAFLDRAFT_67301 [Branchiostoma floridae]
gi|229277653|gb|EEN48445.1| hypothetical protein BRAFLDRAFT_67301 [Branchiostoma floridae]
Length = 409
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
LTCG CL Y PKLLPC+H+ C CL + + ++ CP CR+ + +P
Sbjct: 19 EMLTCGICLDTYT----RPKLLPCAHSFCEDCLQGMVGWRI----SMSCPNCRKDVKLPD 70
Query: 89 GGVAALPPSFLVNQLLDLMSRQR---------RHIIPKCSTHNSQEL-LFCETCDTVFCL 138
GV LP +F V+ L ++S +R R +CSTH ++L FC CD C
Sbjct: 71 TGVRGLPENFWVSNLRQVLSERRELEVRELGMRREGRECSTHEGEQLRYFCTRCDETVCS 130
Query: 139 QCT--GGSNHSSTS-GD 152
+C G NH+ T GD
Sbjct: 131 ECMILGHKNHNVTRLGD 147
>gi|148229453|ref|NP_001088374.1| tripartite motif containing 3 [Xenopus laevis]
gi|54038768|gb|AAH84635.1| LOC495223 protein [Xenopus laevis]
Length = 740
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 31/159 (19%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ ++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 8 EIDKQFLVCSICLERY----HVPKVLPCLHTFCERCLQSYIPPQSL---TLSCPVCRQTS 60
Query: 85 TIPRGGVAALPPSFLVNQLLDLM------SRQRRHIIP----------KCSTHNSQEL-L 127
+P GV+AL +F + L++++ RQ + ++P C H + +
Sbjct: 61 ILPEKGVSALQNNFFITNLMEVLQRSPESGRQEQSVLPSEGQVAGTPLSCPNHQGKTMEY 120
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C C+T C++CT G + EH +P +++
Sbjct: 121 YCGPCETAMCVECTEGEHR-------EHCTVPLKDVLEQ 152
>gi|260826081|ref|XP_002607994.1| hypothetical protein BRAFLDRAFT_213589 [Branchiostoma floridae]
gi|229293344|gb|EEN64004.1| hypothetical protein BRAFLDRAFT_213589 [Branchiostoma floridae]
Length = 745
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 23/134 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQSCLEKLLA--TEPVGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLM------------SRQRRHII-----PKCSTHNSQELL 127
+P+ GV L +FLV +L D++ + ++ KC H
Sbjct: 62 PLPQNGVQGLKSNFLVGKLRDILQQQPQQQPREASEAEEDGVLCAVETSKCEDHQELNKF 121
Query: 128 FCETCDTVFCLQCT 141
+C+TC V CL C
Sbjct: 122 YCDTCHRVICLHCV 135
>gi|54020865|ref|NP_001005680.1| tripartite motif containing 2 [Xenopus (Silurana) tropicalis]
gi|49522062|gb|AAH75100.1| tripartite motif-containing 2 [Xenopus (Silurana) tropicalis]
Length = 760
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H+ +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRSPDNGIEESSILETVSAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C++C+T C CTGG + +EH +P +++
Sbjct: 129 YCQSCETAMCQDCTGGEH-------AEHPTVPLKDVVEQ 160
>gi|148227830|ref|NP_001086096.1| MGC82029 protein [Xenopus laevis]
gi|49257592|gb|AAH74184.1| MGC82029 protein [Xenopus laevis]
Length = 744
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H+ +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRSPDNGIEESSILETVSAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C++C+T C CTGG + +EH +P +++
Sbjct: 129 YCQSCETAMCQDCTGGEH-------AEHPTVPLKDVVEQ 160
>gi|260815213|ref|XP_002602368.1| hypothetical protein BRAFLDRAFT_135712 [Branchiostoma floridae]
gi|229287677|gb|EEN58380.1| hypothetical protein BRAFLDRAFT_135712 [Branchiostoma floridae]
Length = 645
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 30/140 (21%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D ++ FL C CL G PK+LPC HT C CL RI + R +L CPICR+++
Sbjct: 2 DIHDEFLVCKVCL----GEFQQPKMLPCLHTFCQACLERIL--EQRPALSLSCPICRQRV 55
Query: 85 TIPRGGVAALPPSFLVNQLLDLM---SRQRRHIIPK---------------------CST 120
+P+ GV L +F+V +L DL+ S+ R + C +
Sbjct: 56 PLPQNGVQGLKNNFVVVKLRDLVQSPSKGRSEYTVREDDSVPCTACDSGTYLARCYCCES 115
Query: 121 HNSQELLFCETCDTVFCLQC 140
HN +C+TC V CL C
Sbjct: 116 HNEVNKFYCDTCRLVICLHC 135
>gi|260822751|ref|XP_002606765.1| hypothetical protein BRAFLDRAFT_82407 [Branchiostoma floridae]
gi|229292109|gb|EEN62775.1| hypothetical protein BRAFLDRAFT_82407 [Branchiostoma floridae]
Length = 692
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L CG CL + TPKLLPC HT C CL A + CP CR +I +P
Sbjct: 14 EDLLLCGICLDDF----KTPKLLPCGHTFCEKCLENFA----KRGRAFCCPNCRRKIDLP 65
Query: 88 RGGVAALPPSFLVNQLLDLM-------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
GG+ ALP +F + + DL+ R+R KC H + L FC C+ + C +
Sbjct: 66 HGGIRALPGNFWIGGMRDLLMATKKDDDRRRGGFHEKCLLHKEEGLRYFCLDCERMICAE 125
Query: 140 C 140
C
Sbjct: 126 C 126
>gi|148229109|ref|NP_001085492.1| tripartite motif containing 2 [Xenopus laevis]
gi|49117096|gb|AAH72842.1| MGC80218 protein [Xenopus laevis]
Length = 748
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H+ +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRSPDNGIEESSILETVSAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C++C+T C CTGG + +EH +P +++
Sbjct: 129 YCQSCETAMCQDCTGGEH-------AEHPTVPLKDVVEQ 160
>gi|260811452|ref|XP_002600436.1| hypothetical protein BRAFLDRAFT_99626 [Branchiostoma floridae]
gi|229285723|gb|EEN56448.1| hypothetical protein BRAFLDRAFT_99626 [Branchiostoma floridae]
Length = 721
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FLTC C+ + P++LPC HT C CL AA Q L CP CR Q
Sbjct: 9 DDFDELFLTCSICMRHF----QDPRVLPCLHTFCRECLQERAAKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP----KCSTHNSQELLFCETCDTVFCLQ 139
+++P GV L +F VN LLD + ++ P K S S+ +C C + C
Sbjct: 61 VSLPDQGVDGLKTNFYVNNLLDFAAAKKGSGAPCQVCKKSVEGSKS--WCADCAILMCES 118
Query: 140 CT 141
CT
Sbjct: 119 CT 120
>gi|260823250|ref|XP_002604096.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
gi|229289421|gb|EEN60107.1| hypothetical protein BRAFLDRAFT_71615 [Branchiostoma floridae]
Length = 711
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A GT +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLCNLAGR----GGTFQCPNCRQQVRLPFQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + + + + +Q +H+ +CS H S+E+ L+C+ C+ C +C
Sbjct: 68 VAGLPDHLMAANMCEKLQKQEKHLEETREQPQSGNRCSFHPSEEVKLYCKQCNVPVCSEC 127
Query: 141 --TGGSNHSST-----SGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSN 191
G H +T + + T+ P + + E L V K K E+K
Sbjct: 128 CEEGHDGHPTTGLRKAAQERRSTVQPLINEGRNIMENYLSFLKGLVEKEKALVEKKQQ 185
>gi|260806841|ref|XP_002598292.1| hypothetical protein BRAFLDRAFT_69647 [Branchiostoma floridae]
gi|229283564|gb|EEN54304.1| hypothetical protein BRAFLDRAFT_69647 [Branchiostoma floridae]
Length = 728
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 18/158 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL CG CL Y TPK+LPC HT C CL +E+ +L CP+CR+
Sbjct: 9 KQIDKQFLICGICLERY----KTPKVLPCLHTFCECCLQTYIP---QESLSLSCPVCRQT 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH-------IIPK---CSTHNSQEL-LFCETC 132
+P+ GV+AL +F + L++++ R + P+ C +H Q+L +C++C
Sbjct: 62 SILPQKGVSALQNNFFITGLMEVLERPEEDSEDPPEAMKPQPLSCPSHEGQDLEYYCQSC 121
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
+T C CT ++ T+ + + A+++ EI
Sbjct: 122 ETAVCQNCTAVEHNEHTTVQLKDVVQDHKAALQQRLEI 159
>gi|260807305|ref|XP_002598449.1| hypothetical protein BRAFLDRAFT_83265 [Branchiostoma floridae]
gi|229283722|gb|EEN54461.1| hypothetical protein BRAFLDRAFT_83265 [Branchiostoma floridae]
Length = 974
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FLTC C+ + ++LPC HT C CL A+ Q L CP CR Q
Sbjct: 8 DDFDEQFLTCPVCMLHF----RDARILPCLHTFCKQCLQEWASKQD----PLECPTCRTQ 59
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHI--IP--KCSTHNSQELLFCETCDTVFCLQ 139
+++P GV L +F VN LLD + ++R +P C + +C C T+ C
Sbjct: 60 VSLPDQGVDGLKTNFYVNNLLDFAAVKKRAEPGVPCQVCEGNVEGPKSWCADCATLMCES 119
Query: 140 CTGGSNHSSTSGDSEHT 156
C + D E T
Sbjct: 120 CAAVHRKLPATKDHEVT 136
>gi|260811644|ref|XP_002600532.1| hypothetical protein BRAFLDRAFT_145043 [Branchiostoma floridae]
gi|229285819|gb|EEN56544.1| hypothetical protein BRAFLDRAFT_145043 [Branchiostoma floridae]
Length = 760
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D +E LTC C+ + P++LPC HT C CL AA Q L CP CR Q+
Sbjct: 8 DLDEQSLTCPLCMLHF----RDPRVLPCLHTFCRECLQEWAAKQQ----PLECPTCRTQV 59
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR-----RHIIPK-----------------CSTHN 122
++P GV L + VN LLD + ++ ++P+ C H
Sbjct: 60 SLPDQGVDGLRANVYVNNLLDFAAVKKGAGPGHDVVPEEVLKAEKDVSKFQRKRYCHKHK 119
Query: 123 SQELLF-CETCDTVFCLQCT 141
+QEL+F CE+C+ + C CT
Sbjct: 120 NQELVFYCESCNALVCTACT 139
>gi|321471267|gb|EFX82240.1| hypothetical protein DAPPUDRAFT_241481 [Daphnia pulex]
Length = 530
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 23/158 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F+TCG C C YD G+ PK L CSHTVCL CL I R T+ CP CR+ T
Sbjct: 8 EDFITCGVCFCEYDHGDRKPKFLQCSHTVCLSCLKGI-----RHGDTIACPFCRD--TFV 60
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTGGSN 145
+ V +LP + LL L + ++++PK S + L +C TC + CT S
Sbjct: 61 KFDVESLPNNAYAFYLLKL---KEKNVLPKLSEIVTTPLAVSWCLTCGSAEKRTCT-SSG 116
Query: 146 HSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK 183
HSS ++ AI+ + E L+K E + K K
Sbjct: 117 HSSVEMTAD--------AIRNVEE--LFKLKEELMKMK 144
>gi|260792734|ref|XP_002591369.1| hypothetical protein BRAFLDRAFT_227369 [Branchiostoma floridae]
gi|229276574|gb|EEN47380.1| hypothetical protein BRAFLDRAFT_227369 [Branchiostoma floridae]
Length = 698
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 62/142 (43%), Gaps = 36/142 (25%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP C Q+
Sbjct: 10 DFDEQFLTCSVCMLHF----RDPRVLPCLHTFCRECLQEWATKQP----PLECPTCLTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLM------------------------SRQRRHIIPKCST 120
++P GV L +F VN LLD S QR+ PK
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKKGAGPGIVTQENLEASEGVPSSFQRKAFCPK--- 118
Query: 121 HNSQELLF-CETCDTVFCLQCT 141
H Q L F CE C T+ C+ CT
Sbjct: 119 HEDQVLTFYCEPCQTLVCVACT 140
>gi|431918266|gb|ELK17493.1| Tripartite motif-containing protein 2 [Pteropus alecto]
Length = 711
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|297293537|ref|XP_001086769.2| PREDICTED: tripartite motif-containing protein 2 isoform 6 [Macaca
mulatta]
Length = 970
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 257 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 309
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 310 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 369
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 370 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 419
Query: 188 RKSNLR 193
S L+
Sbjct: 420 IDSALQ 425
>gi|390362202|ref|XP_003730096.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Strongylocentrotus purpuratus]
gi|390362204|ref|XP_003730097.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 748
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+ ED + FL C C+ PK+L C HT C+ CL A + L CP+C
Sbjct: 6 VRAEDIDREFLQCPLCIDRL----QKPKVLSCQHTFCVGCLELWVAKNNDQ---LSCPVC 58
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCL 138
R + +P+ GV +LP +F VN ++D + R+R+ + H + +C C+ C
Sbjct: 59 RNEYELPQAGVHSLPDNFFVNSIIDFIGRKRQASATALTCHGCENEASHYCTNCEEELCF 118
Query: 139 QCTG 142
C G
Sbjct: 119 DCAG 122
>gi|397489908|ref|XP_003815955.1| PREDICTED: tripartite motif-containing protein 2-like, partial [Pan
paniscus]
Length = 536
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 66 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 118
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 119 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 178
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + NK PE
Sbjct: 179 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPE 228
Query: 188 RKSNLR 193
S L+
Sbjct: 229 IDSALQ 234
>gi|432093067|gb|ELK25357.1| Tripartite motif-containing protein 2 [Myotis davidii]
Length = 801
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|351707591|gb|EHB10510.1| Tripartite motif-containing protein 2 [Heterocephalus glaber]
Length = 797
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCHECTEGEH-------AEHPTVPLKDVVEQHKAALQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|260825327|ref|XP_002607618.1| hypothetical protein BRAFLDRAFT_71500 [Branchiostoma floridae]
gi|229292966|gb|EEN63628.1| hypothetical protein BRAFLDRAFT_71500 [Branchiostoma floridae]
Length = 618
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ E FLTC C+ +Y PK+LPC HT C CL R AA ++ +L CP CR +
Sbjct: 10 EEIREEFLTCSICMEVY----TRPKMLPCVHTFCQRCLERFAAGKS----SLACPTCRRE 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------CSTH-NSQELLFCET 131
+T+P GGV AL +F + L +S CS H +Q L FC T
Sbjct: 62 VTLPVGGVQALTDNFYIASLCAKVSSPSHETQTTGRTTTPQTTNPCSNHPGNQVLSFCRT 121
Query: 132 CDTVFCLQC 140
C C C
Sbjct: 122 CQVATCAAC 130
>gi|3043558|dbj|BAA25443.1| KIAA0517 protein [Homo sapiens]
Length = 792
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 64 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 116
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 117 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEF 176
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 177 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 226
Query: 188 RKSNLR 193
S L+
Sbjct: 227 IDSALQ 232
>gi|395735425|ref|XP_002815267.2| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2, partial [Pongo abelii]
Length = 794
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 66 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 118
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 119 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 178
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 179 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 228
Query: 188 RKSNLR 193
S L+
Sbjct: 229 IDSALQ 234
>gi|291401099|ref|XP_002716938.1| PREDICTED: tripartite motif-containing 2-like [Oryctolagus
cuniculus]
Length = 789
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 61 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 113
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 114 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 173
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 174 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 223
Query: 188 RKSNLR 193
S L+
Sbjct: 224 IDSALQ 229
>gi|47227079|emb|CAG00441.1| unnamed protein product [Tetraodon nigroviridis]
Length = 774
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 33/165 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y TPK+LPC HT C CL E+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----RTPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL- 126
+P GV AL +F + L++++ R P+ C H + +
Sbjct: 69 LPEKGVCALQNNFFITNLMEVLQRDSECPRPEACSVLESVSAAAAGKPLCCPNHEGKVME 128
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL CT G + EH +P +++ +L
Sbjct: 129 FYCESCETAMCLDCTEGEHR-------EHVTVPLRDVVEQHKAVL 166
>gi|380783255|gb|AFE63503.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783257|gb|AFE63504.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783259|gb|AFE63505.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
gi|380783261|gb|AFE63506.1| tripartite motif-containing protein 2 isoform 1 [Macaca mulatta]
Length = 771
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 43 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 155
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 156 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 205
Query: 188 RKSNLR 193
S L+
Sbjct: 206 IDSALQ 211
>gi|403272313|ref|XP_003928015.1| PREDICTED: tripartite motif-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 771
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 43 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 155
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 156 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 205
Query: 188 RKSNLR 193
S L+
Sbjct: 206 IDSALQ 211
>gi|403272315|ref|XP_003928016.1| PREDICTED: tripartite motif-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 744
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|410038823|ref|XP_517485.4| PREDICTED: tripartite motif-containing protein 2 isoform 9 [Pan
troglodytes]
Length = 576
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 43 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 155
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 156 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 205
Query: 188 RKSNLR 193
S L+
Sbjct: 206 IDSALQ 211
>gi|301756096|ref|XP_002913903.1| PREDICTED: tripartite motif-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 816
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 88 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 140
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 141 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 200
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 201 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 250
Query: 188 RKSNLR 193
S L+
Sbjct: 251 IDSALQ 256
>gi|296195383|ref|XP_002745432.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Callithrix jacchus]
gi|353558885|sp|F7H9X2.1|TRIM2_CALJA RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
Length = 744
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|119625368|gb|EAX04963.1| tripartite motif-containing 2, isoform CRA_c [Homo sapiens]
Length = 770
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 42 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 94
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 95 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEF 154
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 155 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 204
Query: 188 RKSNLR 193
S L+
Sbjct: 205 IDSALQ 210
>gi|355687663|gb|EHH26247.1| hypothetical protein EGK_16166 [Macaca mulatta]
Length = 771
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 43 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEF 155
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 156 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 205
Query: 188 RKSNLR 193
S L+
Sbjct: 206 IDSALQ 211
>gi|194248079|ref|NP_056086.2| tripartite motif-containing protein 2 isoform 1 [Homo sapiens]
gi|119625365|gb|EAX04960.1| tripartite motif-containing 2, isoform CRA_a [Homo sapiens]
gi|119625367|gb|EAX04962.1| tripartite motif-containing 2, isoform CRA_a [Homo sapiens]
gi|168267392|dbj|BAG09752.1| tripartite motif-containing protein 2 [synthetic construct]
Length = 771
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 43 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEF 155
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 156 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 205
Query: 188 RKSNLR 193
S L+
Sbjct: 206 IDSALQ 211
>gi|410956709|ref|XP_003984981.1| PREDICTED: tripartite motif-containing protein 2 [Felis catus]
Length = 744
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|332217500|ref|XP_003257898.1| PREDICTED: tripartite motif-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|402870659|ref|XP_003899324.1| PREDICTED: tripartite motif-containing protein 2 isoform 1 [Papio
anubis]
Length = 771
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 43 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 155
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 156 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 205
Query: 188 RKSNLR 193
S L+
Sbjct: 206 IDSALQ 211
>gi|149698139|ref|XP_001501223.1| PREDICTED: tripartite motif-containing protein 2 [Equus caballus]
Length = 744
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|417412608|gb|JAA52682.1| Putative e3 ubiquitin ligase, partial [Desmodus rotundus]
Length = 761
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 146 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 195
Query: 188 RKSNLR 193
S L+
Sbjct: 196 IDSALQ 201
>gi|332217502|ref|XP_003257899.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Nomascus leucogenys]
gi|402870661|ref|XP_003899325.1| PREDICTED: tripartite motif-containing protein 2 isoform 2 [Papio
anubis]
Length = 744
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|353558883|sp|D2GXS7.1|TRIM2_AILME RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
gi|281350965|gb|EFB26549.1| hypothetical protein PANDA_001730 [Ailuropoda melanoleuca]
Length = 744
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|410038825|ref|XP_003950493.1| PREDICTED: tripartite motif-containing protein 2 [Pan troglodytes]
Length = 549
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|119625366|gb|EAX04961.1| tripartite motif-containing 2, isoform CRA_b [Homo sapiens]
Length = 783
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 42 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 94
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 95 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEF 154
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 155 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 204
Query: 188 RKSNLR 193
S L+
Sbjct: 205 IDSALQ 210
>gi|355749623|gb|EHH54022.1| hypothetical protein EGM_14757, partial [Macaca fascicularis]
Length = 477
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|348582200|ref|XP_003476864.1| PREDICTED: tripartite motif-containing protein 2-like [Cavia
porcellus]
Length = 887
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 159 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 211
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 212 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 271
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 272 YCQSCETAMCHECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 321
Query: 188 RKSNLR 193
S L+
Sbjct: 322 IDSALQ 327
>gi|381388750|ref|NP_001244243.1| tripartite motif-containing protein 2 [Gallus gallus]
Length = 744
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H+ +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRTPENSIEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C +C+T C +CT G + +EH +P +++ L + + S NK PE
Sbjct: 129 YCRSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---SVNKRLPE 178
Query: 188 RKSNL 192
S L
Sbjct: 179 IDSAL 183
>gi|449266608|gb|EMC77650.1| Tripartite motif-containing protein 2, partial [Columba livia]
Length = 755
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 27 IDKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 79
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H+ +
Sbjct: 80 LPEKGVSALQNNFFITNLMDVLQRTPDNNIEESSILETVTAVAAGKPLSCPNHDGNVMEF 139
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 140 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 189
Query: 188 RKSNL 192
S L
Sbjct: 190 IDSAL 194
>gi|194248081|ref|NP_001123539.1| tripartite motif-containing protein 2 isoform 2 [Homo sapiens]
gi|426345754|ref|XP_004040565.1| PREDICTED: tripartite motif-containing protein 2 [Gorilla gorilla
gorilla]
gi|21363034|sp|Q9C040.1|TRIM2_HUMAN RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2; AltName:
Full=RING finger protein 86
gi|12407367|gb|AAG53472.1|AF220018_1 tripartite motif protein TRIM2 [Homo sapiens]
gi|15029681|gb|AAH11052.1| TRIM2 protein [Homo sapiens]
gi|325464659|gb|ADZ16100.1| tripartite motif-containing 2 [synthetic construct]
Length = 744
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|395834570|ref|XP_003790272.1| PREDICTED: tripartite motif-containing protein 2 [Otolemur
garnettii]
Length = 744
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GVAAL +F + L+D++ R I C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNIEDSSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|350587708|ref|XP_003357040.2| PREDICTED: tripartite motif-containing protein 2 [Sus scrofa]
Length = 744
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAYSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCQECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|354474616|ref|XP_003499526.1| PREDICTED: tripartite motif-containing protein 2 isoform 2
[Cricetulus griseus]
Length = 770
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 42 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 94
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 95 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 154
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 155 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 204
Query: 188 RKSNLR 193
S L+
Sbjct: 205 IDSALQ 210
>gi|344291681|ref|XP_003417562.1| PREDICTED: tripartite motif-containing protein 2 [Loxodonta
africana]
Length = 772
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 44 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 96
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 97 LPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEF 156
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C+ C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 157 YCQACETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 206
Query: 188 RKSNLR 193
S L+
Sbjct: 207 IDSALQ 212
>gi|354474614|ref|XP_003499525.1| PREDICTED: tripartite motif-containing protein 2 isoform 1
[Cricetulus griseus]
Length = 761
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 146 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 195
Query: 188 RKSNLR 193
S L+
Sbjct: 196 IDSALQ 201
>gi|392888964|ref|NP_001040818.2| Protein NHL-3, isoform b [Caenorhabditis elegans]
gi|351064888|emb|CCD73638.1| Protein NHL-3, isoform b [Caenorhabditis elegans]
Length = 599
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 107 MSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
M QR+ ++P CS H + +LL+CETCD VFC C + EHT++P SIAIKR
Sbjct: 1 MQIQRKDVVPSCSNHPTDQLLYCETCDLVFCENCQDSVVNKKC---DEHTVVPLSIAIKR 57
Query: 167 MSEILLYKA 175
MSEI++Y+A
Sbjct: 58 MSEIVVYRA 66
>gi|411147443|ref|NP_109631.2| tripartite motif-containing protein 2 isoform 3 [Mus musculus]
gi|74184522|dbj|BAE27883.1| unnamed protein product [Mus musculus]
Length = 761
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 146 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 195
Query: 188 RKSNLR 193
S L+
Sbjct: 196 IDSALQ 201
>gi|73978313|ref|XP_532694.2| PREDICTED: tripartite motif-containing protein 2 [Canis lupus
familiaris]
Length = 684
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 52 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 104
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 105 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDF 164
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + NK PE
Sbjct: 165 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPE 214
Query: 188 RKSNLR 193
S L+
Sbjct: 215 IDSALQ 220
>gi|74194308|dbj|BAE24679.1| unnamed protein product [Mus musculus]
Length = 770
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 42 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 94
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 95 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 154
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 155 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 204
Query: 188 RKSNLR 193
S L+
Sbjct: 205 IDSALQ 210
>gi|60360046|dbj|BAD90242.1| mKIAA0517 protein [Mus musculus]
Length = 787
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 59 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 111
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 112 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 171
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 172 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 221
Query: 188 RKSNLR 193
S L+
Sbjct: 222 IDSALQ 227
>gi|148683462|gb|EDL15409.1| tripartite motif protein 2, isoform CRA_b [Mus musculus]
Length = 761
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 146 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 195
Query: 188 RKSNLR 193
S L+
Sbjct: 196 IDSALQ 201
>gi|224049634|ref|XP_002198438.1| PREDICTED: tripartite motif-containing protein 2 [Taeniopygia
guttata]
Length = 744
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H+ +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRTPDNSIEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNL 192
S L
Sbjct: 179 IDSAL 183
>gi|411147437|ref|NP_001258654.1| tripartite motif-containing protein 2 isoform 1 [Mus musculus]
Length = 770
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 42 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 94
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 95 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 154
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 155 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 204
Query: 188 RKSNLR 193
S L+
Sbjct: 205 IDSALQ 210
>gi|444724164|gb|ELW64779.1| Tripartite motif-containing protein 2 [Tupaia chinensis]
Length = 786
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 58 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 110
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 111 LPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEF 170
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 171 YCQSCETAMCRECTEGEH-------AEHPTVPLRDVVEQHKASLQVQLDAV---NKRLPE 220
Query: 188 RKSNLR 193
S L+
Sbjct: 221 IDSALQ 226
>gi|344239884|gb|EGV95987.1| Tripartite motif-containing protein 2 [Cricetulus griseus]
Length = 744
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|74216647|dbj|BAE37753.1| unnamed protein product [Mus musculus]
Length = 744
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|411147439|ref|NP_001258655.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|411147441|ref|NP_001258656.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|411147445|ref|NP_001258657.1| tripartite motif-containing protein 2 isoform 2 [Mus musculus]
gi|21363036|sp|Q9ESN6.1|TRIM2_MOUSE RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2; AltName:
Full=Neural activity-related RING finger protein
gi|12407365|gb|AAG53471.1|AF220017_1 tripartite motif protein TRIM2 [Mus musculus]
gi|11094232|dbj|BAB17634.1| neural activity-related ring finger protein [Mus musculus]
gi|26337329|dbj|BAC32350.1| unnamed protein product [Mus musculus]
gi|26347983|dbj|BAC37640.1| unnamed protein product [Mus musculus]
gi|37590666|gb|AAH58961.1| Tripartite motif-containing 2 [Mus musculus]
gi|74181085|dbj|BAE27812.1| unnamed protein product [Mus musculus]
gi|148683463|gb|EDL15410.1| tripartite motif protein 2, isoform CRA_c [Mus musculus]
Length = 744
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|26333433|dbj|BAC30434.1| unnamed protein product [Mus musculus]
Length = 558
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEF 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + NK PE
Sbjct: 146 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPE 195
Query: 188 RKSNLR 193
S L+
Sbjct: 196 IDSALQ 201
>gi|440899161|gb|ELR50510.1| Tripartite motif-containing protein 2, partial [Bos grunniens
mutus]
Length = 762
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 34 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 86
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 87 LPEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDF 146
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + N+ PE
Sbjct: 147 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AANRRLPE 196
Query: 188 RKSNLR 193
S L+
Sbjct: 197 IDSALQ 202
>gi|426246927|ref|XP_004017238.1| PREDICTED: tripartite motif-containing protein 2 [Ovis aries]
Length = 739
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + N+ PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AANRRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|139948811|ref|NP_001077204.1| tripartite motif-containing protein 2 [Bos taurus]
gi|353558884|sp|A4IF63.1|TRIM2_BOVIN RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
gi|134025874|gb|AAI34424.1| TRIM2 protein [Bos taurus]
gi|296478797|tpg|DAA20912.1| TPA: tripartite motif-containing 2 [Bos taurus]
Length = 744
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + + N+ PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AANRRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|260823296|ref|XP_002604119.1| hypothetical protein BRAFLDRAFT_71593 [Branchiostoma floridae]
gi|229289444|gb|EEN60130.1| hypothetical protein BRAFLDRAFT_71593 [Branchiostoma floridae]
Length = 591
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A G +CPICR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDLAG----RGGAFQCPICRQQVRLPSRG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + + + + + +Q H+ +CS H S+E+ L+C+ C+ C +C
Sbjct: 68 VTGLPDNLMAANMCEKLQKQENHLEETREQPQSGNRCSFHTSEEVKLYCKQCNMPVCSEC 127
Query: 141 --TGGSNHSSTS 150
G H +T
Sbjct: 128 CEEGHDGHPTTG 139
>gi|260835725|ref|XP_002612858.1| hypothetical protein BRAFLDRAFT_67192 [Branchiostoma floridae]
gi|229298239|gb|EEN68867.1| hypothetical protein BRAFLDRAFT_67192 [Branchiostoma floridae]
Length = 601
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ L CG CL + TPKLLPC HT C CL R R + CP+CR Q IP
Sbjct: 20 DELLACGICLEDF----KTPKLLPCGHTFCQACLERY----VRGASDMACPVCRRQGAIP 71
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPK-------CSTHNSQELL-FCETCDTVFCLQ 139
GV ALP +F V + +L+ QRR C+ H E +C+ C C +
Sbjct: 72 PEGVGALPGNFWVGNVRELLKGQRRERRVNVGGTKRLCAAHCDAEFRCYCKNCSQPVCAE 131
Query: 140 C 140
C
Sbjct: 132 C 132
>gi|426255372|ref|XP_004021323.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM56
[Ovis aries]
Length = 724
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QVPKTLPCLHTYCQDCLAQLA-----EGGRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC--------STHNSQELLFCETCDTV 135
+ +P GVAA +F VN LLDL+ RR P C ++ C C
Sbjct: 63 VPLPPTGVAAFKTNFFVNGLLDLVKAXRRAGKPACALCPLMGGASAGGPATARCLDCADD 122
Query: 136 FCLQCTGGSNHSSTSGDSEHTII 158
C C G H T H ++
Sbjct: 123 LCQACADG--HRCTRQTHSHRVV 143
>gi|260820393|ref|XP_002605519.1| hypothetical protein BRAFLDRAFT_104084 [Branchiostoma floridae]
gi|229290853|gb|EEN61529.1| hypothetical protein BRAFLDRAFT_104084 [Branchiostoma floridae]
Length = 536
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL ++ +T T +CPICR+Q+ P G
Sbjct: 16 LTCSICLGLFT----RPKVLPCQHTFCQGCLQHLSEGET----TFQCPICRQQVRKPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + L L + +Q C H S+E+ L+C+ CD C +C
Sbjct: 68 VKELPNNLLATSLQTKIQQQATESRDFCFLHQSEEIKLYCQECDVPVCNEC 118
>gi|363729521|ref|XP_422922.3| PREDICTED: tripartite motif-containing protein 3 [Gallus gallus]
Length = 743
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 15 IDKQFLVCSICLDRY----RNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIP-----------------KCSTHNSQEL-L 127
+P GVAAL +F + L++++ R P C H + +
Sbjct: 68 LPERGVAALQNNFFITNLMEVLQRDPDSRGPHPGPGLDPVSAVTGQPLSCPNHEGKVMEF 127
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+CE+C+T C +CT G + EH +P +++
Sbjct: 128 YCESCETAMCRECTEGEHR-------EHVTVPLRDVVEQ 159
>gi|291230141|ref|XP_002735026.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 728
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL CG CL Y TPK+LPC HT C CL + +L CPICR+
Sbjct: 12 KQIDKQFLKCGICLERY----RTPKVLPCLHTFCQKCLQNYIPPHSL---SLSCPICRQT 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM-------SRQRRHIIPKCSTHNSQELLF-CETCDTV 135
+P GV+ L +F + L++++ ++ +P C +H + L F CE+C+T
Sbjct: 65 SILPEEGVSGLQNNFFITNLMEVLEGPKTNGTQSDSKALP-CPSHEGEVLKFYCESCETA 123
Query: 136 FCLQCTGGSNHSSTSGDSEHTIIPFSIAI 164
C CT + +EH+ +P A+
Sbjct: 124 VCQHCT-------IAEHNEHSTVPLKDAV 145
>gi|157818847|ref|NP_001102022.1| tripartite motif-containing protein 2 [Rattus norvegicus]
gi|149048249|gb|EDM00825.1| tripartite motif protein 2 [Rattus norvegicus]
Length = 761
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDPSILQTVTAVAAGKPLSCPNHDGNVMEF 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 146 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 195
Query: 188 RKSNLR 193
S L+
Sbjct: 196 IDSALQ 201
>gi|260824808|ref|XP_002607359.1| hypothetical protein BRAFLDRAFT_69765 [Branchiostoma floridae]
gi|229292706|gb|EEN63369.1| hypothetical protein BRAFLDRAFT_69765 [Branchiostoma floridae]
Length = 632
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + L+CP+CR+Q+ +PR G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASRRV----PLQCPVCRQQVRLPRQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + LV L + + +R++ +CS H S+E+ L+C+ C+ C +C
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEEVKLYCKQCNVPVCCEC 127
>gi|348518664|ref|XP_003446851.1| PREDICTED: tripartite motif-containing protein 3-like [Oreochromis
niloticus]
Length = 748
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 33/165 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL E+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----RNPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL- 126
+P GV AL +F + L++++ R P+ C H + +
Sbjct: 69 LPEKGVCALQNNFFITNLMEVLQRDPECSRPEACSVLESVSAAAAGKPLCCPNHEGKVME 128
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL+CT G + EH +P +++ +L
Sbjct: 129 FYCESCETAMCLECTEGEHR-------EHMTVPLRDVVEQHKAVL 166
>gi|410932203|ref|XP_003979483.1| PREDICTED: tripartite motif-containing protein 3-like [Takifugu
rubripes]
Length = 711
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 33/165 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL E+ TL CP+CR+
Sbjct: 16 IDKQFLVCSICLDHY----RNPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL- 126
+P GV AL +F + L++++ R P+ C H + +
Sbjct: 69 LPEKGVCALQNNFFITNLMEVLQRDSECSRPEACSVLESVSAAAAGKPLCCPNHEGKVME 128
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+CE+C+T CL CT G + EH +P +++ +L
Sbjct: 129 FYCESCETAMCLDCTEGEHR-------EHETVPLRDVVEQHKAVL 166
>gi|353558899|sp|D3ZQG6.2|TRIM2_RAT RecName: Full=Tripartite motif-containing protein 2; AltName:
Full=E3 ubiquitin-protein ligase TRIM2
Length = 744
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSNGEDPSILQTVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNLR 193
S L+
Sbjct: 179 IDSALQ 184
>gi|326918225|ref|XP_003205391.1| PREDICTED: tripartite motif-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 235
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H+ +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRTPENSIEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C +C+T C +CT G + +EH +P +++ L + + S NK PE
Sbjct: 129 YCRSCETAMCRECTEGEH-------AEHPTVPLKDMVEQHKASLQVQLD---SVNKRLPE 178
Query: 188 RKSNL 192
S L
Sbjct: 179 IDSAL 183
>gi|260823290|ref|XP_002604116.1| hypothetical protein BRAFLDRAFT_71596 [Branchiostoma floridae]
gi|229289441|gb|EEN60127.1| hypothetical protein BRAFLDRAFT_71596 [Branchiostoma floridae]
Length = 819
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ K+LPC HT C +CL A G +CPICR Q+ +P G
Sbjct: 16 LSCSICLELFT----RSKVLPCQHTFCQNCLQDHAG----RGGAFQCPICRRQVRLPTQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + + + + + +Q H+ +CS H ++E+ L+C+ C+ C +C
Sbjct: 68 VAGLPDNLMAANMCEKLQKQENHLEEIREQPQSRNRCSFHPTEEVKLYCKQCNVPVCTEC 127
>gi|126330157|ref|XP_001363305.1| PREDICTED: tripartite motif-containing protein 3 [Monodelphis
domestica]
Length = 744
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 IDKQFLVCSICLDRY----HCPKVLPCLHTFCERCLQSYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR----QRRHIIP-----------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L+++M R R P C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISNLIEVMQRTPDGGRDPTAPHPLCAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGGS 144
E+C+T C +C G
Sbjct: 128 ESCETAMCGECRAGE 142
>gi|395526430|ref|XP_003765366.1| PREDICTED: tripartite motif-containing protein 3 [Sarcophilus
harrisii]
Length = 744
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y H PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 IDKQFLVCSICLDRY----HCPKVLPCLHTFCERCLQSYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR----QRRHIIP-----------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L+++M R R P C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISNLIEVMQRTPDGGRDPTAPHPLCAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E+C+T C +C G
Sbjct: 128 ESCETAMCGECRAG 141
>gi|260792625|ref|XP_002591315.1| hypothetical protein BRAFLDRAFT_76766 [Branchiostoma floridae]
gi|229276519|gb|EEN47326.1| hypothetical protein BRAFLDRAFT_76766 [Branchiostoma floridae]
Length = 669
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E FL+CG CL Y PK+LPC+HT C CL + T+ CP CR Q+ +P
Sbjct: 11 EDFLSCGICLEPY----KKPKILPCAHTFCERCLK----AHTKLKRKFSCPHCRRQVILP 62
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHI------IPKCSTHNSQEL-LFCETCDTVFCLQC 140
GV L +F + D++ QR+ + C H ++L FC+ CD C C
Sbjct: 63 PEGVKGLGDNFWIGSFRDILEAQRQSLGIVGAGRKLCQEHEGEQLKYFCKRCDVTICSDC 122
>gi|90075848|dbj|BAE87604.1| unnamed protein product [Macaca fascicularis]
Length = 229
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 35/187 (18%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 42 QIDKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTS 94
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL- 126
+P GVAAL +F + L+D++ R + I+ C H+ +
Sbjct: 95 ILPEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVME 154
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCP 186
+C++C+T C +CT G + +EH +P +++ L + + + NK P
Sbjct: 155 FYCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLD---AVNKRLP 204
Query: 187 ERKSNLR 193
E S L+
Sbjct: 205 EIDSALQ 211
>gi|334331088|ref|XP_003341442.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
2-like [Monodelphis domestica]
Length = 791
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 63 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 115
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I+ C H+ +
Sbjct: 116 LPEKGVSALQNNFFITNLMDVLQRTPGSNTEESSILETVTAVAAGKPLSCPNHDGNVMEF 175
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 176 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 225
Query: 188 RKSNL 192
S L
Sbjct: 226 IDSAL 230
>gi|260828566|ref|XP_002609234.1| hypothetical protein BRAFLDRAFT_90688 [Branchiostoma floridae]
gi|229294589|gb|EEN65244.1| hypothetical protein BRAFLDRAFT_90688 [Branchiostoma floridae]
Length = 725
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FL C C+ + PK+LPC HT C CL A Q L CP CR Q
Sbjct: 7 DDFDEQFLACPVCMLHF----RDPKILPCLHTFCRECLQEWATKQQ----PLECPTCRTQ 58
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----CSTHNSQELLFCETCDTVFCL 138
+++P GV L +F VN LLD + ++ + P C + +C C + C
Sbjct: 59 VSLPDQGVDGLRTNFYVNNLLDFAA-AKKGVEPGVPCQVCDGNVEGSKSWCADCAKLMCD 117
Query: 139 QCT 141
CT
Sbjct: 118 SCT 120
>gi|260792732|ref|XP_002591368.1| hypothetical protein BRAFLDRAFT_93989 [Branchiostoma floridae]
gi|229276573|gb|EEN47379.1| hypothetical protein BRAFLDRAFT_93989 [Branchiostoma floridae]
Length = 663
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRH----IIPKCSTHNSQELLFCETCDTVFCLQC 140
++P GV L +F VN LLD + ++ C +C C + C C
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKKGAGPGVACQVCEGKEEGARSWCVQCAVLLCESC 121
Query: 141 TGGSNHSSTSGDSEHTII 158
T + H G H I+
Sbjct: 122 T--NTHRKFPGMKGHQIV 137
>gi|395542524|ref|XP_003773179.1| PREDICTED: tripartite motif-containing protein 2 [Sarcophilus
harrisii]
Length = 744
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIP-----------KCSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I+ C H+ +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRTPGSNTEESSILETVTAVAAGKPLSCPNHDGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
+C++C+T C +CT G + +EH +P +++ L + + NK PE
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQHKASLQVQLDAV---NKRLPE 178
Query: 188 RKSNL 192
S L
Sbjct: 179 IDSAL 183
>gi|260835848|ref|XP_002612919.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
gi|229298301|gb|EEN68928.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
Length = 604
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N + E L+CG CL + P++LPC HT C +C+S+I+A + RCP CR
Sbjct: 5 NLQKIREELLSCGVCLETFT----EPRVLPCQHTFCQNCISKISADKR----IFRCPTCR 56
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRR--------HIIPKCSTHNSQ-ELLFCETC 132
EQ+ +P+ GV +F + + + ++ KC TH + +C+ C
Sbjct: 57 EQVILPKDGVEGFKKNFEIASFCEKLVVVKKPPPIAEKPRAFDKCGTHKKEVRRFYCQQC 116
Query: 133 DTVFCLQC 140
C +C
Sbjct: 117 KVAICSEC 124
>gi|327274049|ref|XP_003221791.1| PREDICTED: tripartite motif-containing protein 2-like [Anolis
carolinensis]
Length = 748
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R + I + C H +
Sbjct: 69 LPEKGVSALQNNFFITNLMDVLQRTPENSIEESSILETVTAVAAGKPLSCPNHEGNLMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C++C+T C +CT G + +EH +P +++
Sbjct: 129 YCQSCETAMCRECTEGEH-------AEHPTVPLKDVVEQ 160
>gi|260814093|ref|XP_002601750.1| hypothetical protein BRAFLDRAFT_76030 [Branchiostoma floridae]
gi|229287052|gb|EEN57762.1| hypothetical protein BRAFLDRAFT_76030 [Branchiostoma floridae]
Length = 669
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE FL C C +D PK+LPC HT C CL ++ A+Q L CP CR+++
Sbjct: 8 EINEEFLVCQICYNDFD----RPKILPCLHTFCQPCLEKLFAAQADRN--LSCPTCRQEL 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD-----TVFCLQ 139
+P GV L +FLV++L D++++ P N+Q++ C C T +C+
Sbjct: 62 YLPPHGVQGLKDNFLVSKLRDVVTK------PGRPPANAQDVTICRVCSTGTGATFYCVD 115
Query: 140 C 140
C
Sbjct: 116 C 116
>gi|260835099|ref|XP_002612547.1| hypothetical protein BRAFLDRAFT_75330 [Branchiostoma floridae]
gi|229297924|gb|EEN68556.1| hypothetical protein BRAFLDRAFT_75330 [Branchiostoma floridae]
Length = 332
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E E L CG C + PK LPC HT C CL+++A S + CPICR +
Sbjct: 6 EKILEEGLCCGICHETF----RRPKSLPCGHTFCEECLTKLATS----FRDICCPICRRE 57
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--QRRHIIPKCSTHNSQEL-LFCET--CDTVFCL 138
+ +P GVA LP + + ++ S + II +C H S+ L FC+T CD C
Sbjct: 58 VPLPTDGVAGLPTDYRLAEMSKKFSEVTVEQDIIQRCEYHPSEHLRYFCKTSKCDVPICG 117
Query: 139 QCTGGSNHSSTSGDSEHTIIPFSIAI-KRMSEI 170
QC G S+ S H+I+ A+ KRM ++
Sbjct: 118 QCIGDSH-------SGHSIVSLKQAVEKRMEKV 143
>gi|260830180|ref|XP_002610039.1| hypothetical protein BRAFLDRAFT_99993 [Branchiostoma floridae]
gi|229295402|gb|EEN66049.1| hypothetical protein BRAFLDRAFT_99993 [Branchiostoma floridae]
Length = 624
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+ FL C CL + PK LPC HT C CL A + + CP CR T
Sbjct: 11 IKDEFLQCWLCLDTF----KRPKALPCLHTFCERCLQDYAEERPK----FLCPYCRADTT 62
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK----------CSTHNSQELL-FCETCDT 134
+P GGV ALP +F + + DL+ +Q +P C H +++L C TCD
Sbjct: 63 LPEGGVTALPDNFWIVSMKDLLHKQ----VPTQDNSESDSSMCRVHGNEDLSHHCNTCDD 118
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRP 194
V C +C S+ + E I I + E K E S+ E + L+
Sbjct: 119 VICRECISHSHSQHSVSKLEEVIEKSHTEINGLLEKGRNKLEEYGSQIARLSEEEQRLKL 178
Query: 195 SAHKADAYVR 204
+ K + +V+
Sbjct: 179 NKLKVERHVK 188
>gi|260795081|ref|XP_002592535.1| hypothetical protein BRAFLDRAFT_69052 [Branchiostoma floridae]
gi|229277755|gb|EEN48546.1| hypothetical protein BRAFLDRAFT_69052 [Branchiostoma floridae]
Length = 279
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 31/178 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET--GTLRCPICREQ 83
++ + C C Y+ PK+LPC HT C+ CL+R+ AS+T ++ G L CP+CRE+
Sbjct: 32 ISDEMIVCNICFETYN----RPKVLPCLHTFCMDCLARLTASKTAKSPKGKLTCPMCREE 87
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL 126
+P+ GV L +F V+ L ++ +R C TH+ + +
Sbjct: 88 TPLPKNGVKGLRDNFFVSNLCQILHAERERTRNAPRPRSPAPPRREKKEVTCGTHDGEVI 147
Query: 127 -LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK 183
FC+ C+ C C ++ HT+ A + E + + EC + K
Sbjct: 148 KYFCDKCEVPICGDCFVMEHNG-------HTVSKLKDAASKYCERIRERVGECRERAK 198
>gi|432847405|ref|XP_004066008.1| PREDICTED: tripartite motif-containing protein 2-like [Oryzias
latipes]
Length = 744
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 32/162 (19%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ ++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+
Sbjct: 13 FRQIDKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQ 65
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPK-----------CSTHNSQE 125
+P GVAAL +F + L+D++ R Q I+ C H
Sbjct: 66 TSILPEKGVAALQSNFFITNLMDVLQRAPDNCSQEDTILNNIACVATGQLLSCPNHGGSV 125
Query: 126 L-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+ +C C+T C +CT G + EH +P +++
Sbjct: 126 MEFYCPPCETAMCQECTSGEH-------GEHPTVPLRDVVEQ 160
>gi|260824639|ref|XP_002607275.1| hypothetical protein BRAFLDRAFT_88223 [Branchiostoma floridae]
gi|229292621|gb|EEN63285.1| hypothetical protein BRAFLDRAFT_88223 [Branchiostoma floridae]
Length = 661
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 19/125 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 8 EITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLA--TEPVGKLSCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ---ELLFCETCD-----TVF 136
+P GV L +FLV +L D++ +Q PK S +S+ E + C C+ +
Sbjct: 62 PLPENGVQGLKSNFLVGKLHDILRQQ-----PKGSKESSEPQTEGIPCTACERGNPAEFY 116
Query: 137 CLQCT 141
C++CT
Sbjct: 117 CVECT 121
>gi|260824641|ref|XP_002607276.1| hypothetical protein BRAFLDRAFT_88224 [Branchiostoma floridae]
gi|229292622|gb|EEN63286.1| hypothetical protein BRAFLDRAFT_88224 [Branchiostoma floridae]
Length = 1035
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ A T G L CP CR+
Sbjct: 6 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLA--TEPVGKLSCPTCRQ 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ---ELLFCETC-----DT 134
+ +P GV L +FLV +L D+M +Q PK S S+ E + C C
Sbjct: 60 DVPLPENGVQGLKSNFLVCKLHDIMRQQ-----PKVSGKTSESQREGIPCTACARGIPAE 114
Query: 135 VFCLQCTG------GSNHSSTSGDSEHTIIPF-SIAIKRMS-EILLYKANECVSKNKV 184
+C++CT H G H ++ + R++ EI ++++C N++
Sbjct: 115 FYCVECTDYLCHVCNDTHRGLKGTRSHKVLAIQDLQSGRLANEIRARESSKCEDHNEL 172
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ A T+ G L CP CR+
Sbjct: 380 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLA--TKPVGKLSCPTCRQ 433
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQ----------RRHIIP--KCSTHNSQELLFCE 130
+ +P GV L +FLV +L D++ +Q +R +P C N E +C
Sbjct: 434 DVPLPENGVQGLKSNFLVGKLHDILRQQPTGNGDTSEPQREGVPCTACERGNPAE-FYCV 492
Query: 131 TCDTVFCLQCT 141
C C C
Sbjct: 493 ECTDYLCQMCN 503
>gi|432896009|ref|XP_004076255.1| PREDICTED: tripartite motif-containing protein 3-like [Oryzias
latipes]
Length = 752
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 33/160 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL E+ TL CP+CR+
Sbjct: 20 IDKQFLVCSICLDHY----CNPKVLPCLHTFCESCLQNYIPP---ESLTLSCPVCRQTSI 72
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------------CSTHNSQEL- 126
+P GV AL +F + L++++ R+ P+ C H+ + +
Sbjct: 73 LPEKGVCALQNNFFITNLMEVLQREPECSRPEACSVLESVSAAAAGKPLCCPNHDGKVME 132
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+CE+C+T CL+CT G + EH +P +++
Sbjct: 133 FYCESCETAMCLECTEGEHR-------EHVTVPLRDVVEQ 165
>gi|260812231|ref|XP_002600824.1| hypothetical protein BRAFLDRAFT_75885 [Branchiostoma floridae]
gi|229286114|gb|EEN56836.1| hypothetical protein BRAFLDRAFT_75885 [Branchiostoma floridae]
Length = 662
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 14/123 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL R+ A++ R G L CP CR+ +
Sbjct: 8 EITDEFLVCQICLEDF----RQPKMLPCLHTFCQPCLERLLATEPR-VGKLNCPTCRQDV 62
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ-ELLFCETCD-----TVFCL 138
+P GV L +FLV +L D++ +Q R K T Q + L C C+ +C+
Sbjct: 63 PLPESGVQGLKSNFLVGKLHDILQQQTR---GKEDTDEPQAKRLPCTACERGNPAEFYCV 119
Query: 139 QCT 141
+CT
Sbjct: 120 ECT 122
>gi|260782668|ref|XP_002586406.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
gi|229271513|gb|EEN42417.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
Length = 684
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 31/139 (22%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++F++ FLTC C ++ PK+LPC HT C CL + + + CP CR +
Sbjct: 8 QEFDQEFLTCPVCNKLF----CEPKILPCLHTFCKTCLEKWMKQK------VSCPFCRTK 57
Query: 84 ITIPRGGVAALPPSFLVNQLLD-----------------LMSRQRR---HIIPKCSTHNS 123
+T+P GV+ LP +F +N+LLD L S++RR H C H
Sbjct: 58 VTLPSEGVSGLPTNFNINKLLDFRKLQKSKNLPCQLFEELRSKERRSRYHRKLYCRDHPD 117
Query: 124 QELLF-CETCDTVFCLQCT 141
Q L F C+ C+ + C CT
Sbjct: 118 QVLAFYCDPCERLVCRDCT 136
>gi|156370888|ref|XP_001628499.1| predicted protein [Nematostella vectensis]
gi|156215477|gb|EDO36436.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC C ++ P++ PC H+ C CL+ IA S+ + + CP C+ +I P
Sbjct: 11 EELLTCRQCSNVF----KNPRITPCLHSFCAECLNEIARSRPYQA-YIACPTCKYEIRKP 65
Query: 88 RGGV-AALPPSFLVNQLLDL-MSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTGG 143
GG+ LPP+F +N+L D+ ++++R + C + + LL FC CDT C +C
Sbjct: 66 EGGLFNTLPPNFFLNRLHDIYVAKRRSYSDSNCGNCHRKVLLNSFCFACDTFMCEECLTA 125
Query: 144 SNHS-------STSGDSEHTIIPFSIAIK 165
NH + D + II +I +K
Sbjct: 126 HNHKHKIIDIHDAANDHKMKIIDGNIKLK 154
>gi|260816137|ref|XP_002602828.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
gi|229288141|gb|EEN58840.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
Length = 348
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F E ++CG CL + PK+LPC HT C CL A G LRCP CR ++
Sbjct: 10 FPEDSMSCGICLQPF----KRPKILPCGHTFCEECLVEAA------RGGLRCPTCRVRVP 59
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR-------QRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
+ +GGVAALP ++ V ++ S + C H ++L LFC+TC+ C
Sbjct: 60 L-KGGVAALPNNYQVTEMCQKFSELAAAARDATQQWDATCENHPPEKLRLFCQTCEVPVC 118
Query: 138 LQCTGGSNHSSTSGDSEHTIIPFSIAI-KRMSEIL-LYKANECVSKNKVCPERKSNLRPS 195
QC S H +I A+ KRM+ + L K K + ER+ L
Sbjct: 119 NQCLDDSAHK-----GHKNVITVKQAVEKRMTTVTPLLK-----EKKRQIEERRQYLEKL 168
Query: 196 AH 197
+H
Sbjct: 169 SH 170
>gi|443720821|gb|ELU10406.1| hypothetical protein CAPTEDRAFT_146794, partial [Capitella teleta]
gi|443730823|gb|ELU16175.1| hypothetical protein CAPTEDRAFT_97658, partial [Capitella teleta]
Length = 216
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
+++ E+ N+ LTC C+ + G+ PKLLPC H+ C CL ++A S + + CP
Sbjct: 9 ALSAENLND-LLTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMARSHS----FVDCPT 63
Query: 80 CREQITIP---RGGVAALPPSFLVNQLLD-LMSRQRRHIIPKCSTH-NSQELLFCETCDT 134
CRE+ +P G+ L +F V Q+ + L+ RR C H NS + FC TC+
Sbjct: 64 CRERTPLPCPAPAGIHRLQTNFYVTQMQEILIDDSRRVDRSSCRKHSNSALVFFCSTCEV 123
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANE 177
C +C S+ D+ H ++ A+ L + E
Sbjct: 124 EICKECC-----STEHKDATHAVLKMDDAVAEQQAFLDVEMTE 161
>gi|260809305|ref|XP_002599446.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
gi|229284725|gb|EEN55458.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
Length = 684
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 31/139 (22%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++F++ FLTC C ++ PK+LPC HT C CL + + + CP CR +
Sbjct: 8 QEFDQEFLTCPVCNKLF----CEPKILPCLHTFCKTCLEKWMKQK------VSCPFCRTK 57
Query: 84 ITIPRGGVAALPPSFLVNQLLD-----------------LMSRQRR---HIIPKCSTHNS 123
+T+P GV+ LP +F +N+LLD L S++RR H C H
Sbjct: 58 VTLPSEGVSGLPTNFNINKLLDFRKLQKSKNLPCQLFEELRSKERRSRYHRKLYCRDHPD 117
Query: 124 QELLF-CETCDTVFCLQCT 141
Q L F C+ C+ + C CT
Sbjct: 118 QVLAFYCDPCERLVCRDCT 136
>gi|348524478|ref|XP_003449750.1| PREDICTED: tripartite motif-containing protein 2-like [Oreochromis
niloticus]
Length = 744
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELL------------ 127
+P GVAAL +F + L+D++ R Q + +T + +LL
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRAPGSCSQEAAALNNITTVATGQLLSCPNHGGSVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C C+T C +CT G + EH +P +++
Sbjct: 129 YCPPCETAMCQECTSGEH-------GEHPTVPLKDVVEQ 160
>gi|260824629|ref|XP_002607270.1| hypothetical protein BRAFLDRAFT_88218 [Branchiostoma floridae]
gi|229292616|gb|EEN63280.1| hypothetical protein BRAFLDRAFT_88218 [Branchiostoma floridae]
Length = 660
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ T G L CP CR+
Sbjct: 6 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQPCLERLLV--TEPVGKLSCPTCRQ 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ---ELLFCETC-----DT 134
+ +P+ GV L +FLV +L D+M +Q PK S S+ E + C C
Sbjct: 60 DVPLPQNGVQGLKSNFLVCKLHDIMRQQ-----PKVSGKTSESQREGIPCTACARGIPAE 114
Query: 135 VFCLQCTG------GSNHSSTSGDSEHTIIPF-SIAIKRMS-EILLYKANECVSKNKV 184
+C++CT H G H ++ + R++ EI K+++C N++
Sbjct: 115 FYCVECTDYLCHVCNDTHRGLKGTRSHKVLTIQDLQSGRLANEIRARKSSKCEDHNEL 172
>gi|405958433|gb|EKC24561.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 590
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC-----LSRIAASQTRETGTLRCP 78
++ N+ FLTC CL G +PK L C HT C C ++ + + CP
Sbjct: 61 QEINDEFLTCKICL----EGYKSPKCLDCLHTFCEQCIDNHIMNECTYKKYSDYREFTCP 116
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCST------HNSQELLFCETC 132
+CR++ +P GGV LP +FLV+ L +L+ RQR P C + + C C
Sbjct: 117 LCRKRTQLPLGGVKKLPDNFLVSSLSELVQRQRPSKFPFCDICKLVNRKHREATSKCLDC 176
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSE 169
+ + C QC H T H+I F + I++ E
Sbjct: 177 NKLLCKQCV--EMHKETKVTKNHSI--FDVEIEKDIE 209
>gi|443687940|gb|ELT90768.1| hypothetical protein CAPTEDRAFT_49606, partial [Capitella teleta]
Length = 159
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
+++ E+ N+ LTC C+ + G+ PKLLPC H+ C CL ++A R + CP
Sbjct: 2 ALSAENLND-LLTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMA----RSHSFVDCPT 56
Query: 80 CREQITIP---RGGVAALPPSFLVNQLLD-LMSRQRRHIIPKCSTH-NSQELLFCETCDT 134
CRE+ +P G+ L +F V Q+ + L+ RR C H NS + FC TC+
Sbjct: 57 CRERTPLPCPAPAGIHRLQTNFYVTQMQEILIDDSRRVDRSSCRKHSNSALVFFCSTCEV 116
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANE 177
C +C S+ D+ H ++ A+ L + E
Sbjct: 117 EICKECC-----STEHKDATHAVLKMDDAVAEQQAFLDVEMTE 154
>gi|344289795|ref|XP_003416626.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like [Loxodonta
africana]
Length = 756
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QVPKTLPCLHTYCQACLAQLA-----EGGHLRCPECREV 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GGVAA +F VN LLDL++
Sbjct: 63 VPVPPGGVAAFKTNFFVNGLLDLVT 87
>gi|260833106|ref|XP_002611498.1| hypothetical protein BRAFLDRAFT_63867 [Branchiostoma floridae]
gi|229296869|gb|EEN67508.1| hypothetical protein BRAFLDRAFT_63867 [Branchiostoma floridae]
Length = 586
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 12 NSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE 71
N +V+ S E FL C C YD PK+LPC HT C CL + A +
Sbjct: 332 NCHIVQMASGVASQIKEEFLVCQICFEDYD----KPKVLPCQHTFCQKCLKEMLA----K 383
Query: 72 TGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ----RRHIIPKCSTHNSQELL 127
G L CP CR + +P+ GV LP SF VN+L D++ R P S
Sbjct: 384 MGKLTCPNCRLECQLPQNGVEGLPTSFFVNKLRDIIRGSGGVTRARTSPCTCDDKSTTTS 443
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIP 159
C C C C+ ++H + + H ++P
Sbjct: 444 CCLDCRKELCAPCS--ASHRRPTANRRHRVVP 473
>gi|260826057|ref|XP_002607982.1| hypothetical protein BRAFLDRAFT_213523 [Branchiostoma floridae]
gi|229293332|gb|EEN63992.1| hypothetical protein BRAFLDRAFT_213523 [Branchiostoma floridae]
Length = 749
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 25/136 (18%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE-Q 83
D + FL C CL + PK+LPC HT C CL ++ A + G L CP CR+
Sbjct: 8 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLEKLLAIEP--VGKLDCPTCRQGA 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM------------SRQRRHII------PKCSTHNSQE 125
+ +P GV L +FLV +L D++ S+ R + KC H+
Sbjct: 62 VPLPENGVQGLKSNFLVGKLRDILQQQPQQQPKGESSQAREEGVLCAVETSKCEDHHELN 121
Query: 126 LLFCETCDTVFCLQCT 141
+C+TC V CL C
Sbjct: 122 KFYCDTCHRVICLHCV 137
>gi|291231763|ref|XP_002735833.1| PREDICTED: acetylcholinesterase-like [Saccoglossus kowalevskii]
Length = 1140
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+D NE+ L C C + +PK+LPC HT C CL + G L CP CR+
Sbjct: 16 DDINENVLLCAVCQERFT----SPKILPCVHTFCEKCLKTWVE---KNGGQLTCPTCRKS 68
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQELLFCETCDTVFCLQCT 141
IP GG+ AL + +N +L++ S + + KC S +C+ C FC +C+
Sbjct: 69 HIIPPGGIGALNNNLFINDVLEMFSNVKIGQDMLKCEVCASAASFWCKDCVQFFCQECS 127
>gi|260820806|ref|XP_002605725.1| hypothetical protein BRAFLDRAFT_77992 [Branchiostoma floridae]
gi|229291060|gb|EEN61735.1| hypothetical protein BRAFLDRAFT_77992 [Branchiostoma floridae]
Length = 636
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL ++ A++ G L CP CR+ +
Sbjct: 9 EITDEFLVCQVCLEDF----KQPKMLPCLHTFCQLCLEKLLAAEL--DGKLACPTCRQDV 62
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT-----VFCL 138
+P+ GV L +FLV +L D++ +Q + + +E+ + C CD +C+
Sbjct: 63 ALPQNGVQGLKSNFLVGKLHDILQQQAKE---DGEASDPREIGVTCAVCDKGNAAEFYCV 119
Query: 139 QCT 141
+CT
Sbjct: 120 ECT 122
>gi|321471408|gb|EFX82381.1| hypothetical protein DAPPUDRAFT_316827 [Daphnia pulex]
Length = 521
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F+TCG CL YD PK LPCSHTVCL CL I R T+ CP CR+ +T
Sbjct: 10 EDFVTCGVCLWEYDEEIRKPKFLPCSHTVCLECLKEI-----RRADTITCPFCRKVVTKD 64
Query: 88 R---GGVAALPPSFLVNQLLDLMSRQ 110
G LP +F QLL L ++
Sbjct: 65 VTSPGAEWILPNNFYALQLLKLNKQK 90
>gi|260824439|ref|XP_002607175.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
gi|229292521|gb|EEN63185.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
Length = 720
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF++ FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 4 DFDDQFLTCPVCMLHF----RDPRILPCLHTFCRECLQEWATKQQ----PLECPTCRTQV 55
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR--RHIIP--KCSTHNSQELLFCETCDTVFCLQC 140
++P GV L +F VN LLD + ++ +P C + +C C + C C
Sbjct: 56 SLPDQGVDGLRTNFYVNNLLDFAAAKKGAEPGVPCQVCKGNVEGSKSWCADCAILMCESC 115
Query: 141 T 141
T
Sbjct: 116 T 116
>gi|260811664|ref|XP_002600542.1| hypothetical protein BRAFLDRAFT_205327 [Branchiostoma floridae]
gi|229285829|gb|EEN56554.1| hypothetical protein BRAFLDRAFT_205327 [Branchiostoma floridae]
Length = 667
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 31/126 (24%)
Query: 37 LCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPP 96
+CM D P++LPC HT C CL A Q L CP CR Q+++P GV L
Sbjct: 13 ICMQDF--RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQVSLPDQGVDGLRT 66
Query: 97 SFLVNQLLDLMS--------------------RQRRHIIPKCSTHNSQELLF-CETCDTV 135
+F VN LLD + ++RH C H +QEL+F CE+C+ +
Sbjct: 67 NFYVNSLLDFAAAKKGAEPGEDITTMGGMEGLERKRH----CHKHKNQELVFYCESCNAL 122
Query: 136 FCLQCT 141
C CT
Sbjct: 123 VCTACT 128
>gi|405976134|gb|EKC40653.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 740
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E FLTC CL ++ PK LPC H+ C C++ + + + CPICRE +P
Sbjct: 10 EDFLTCSICLEIFTD----PKTLPCLHSFCKDCVNNLTILEGACINSYSCPICRESFQLP 65
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRR--HIIPKCST--HNSQELLFCETCDTVFCLQCTGG 143
+GG L +F + L+D ++ ++ C T N+ + C TC+ + C +C
Sbjct: 66 KGGADDLKTNFCLKNLIDFVTSTKKANEFCSFCHTKGENNDAVALCLTCNDLLCPEC-AD 124
Query: 144 SNHSSTSGDSEHTIIPFS 161
H ST+ H ++P +
Sbjct: 125 HLHRSTTLTMHHRVVPLA 142
>gi|410917734|ref|XP_003972341.1| PREDICTED: tripartite motif-containing protein 2-like isoform 1
[Takifugu rubripes]
Length = 743
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELL------------ 127
+P GVAAL +F + L+D++ R Q + + + +LL
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSFSQEAAALNSVTNVAAGQLLSCPNHGGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C C+T C +CT G + EH +P +++
Sbjct: 129 YCPHCETAMCQECTNGEH-------GEHPTVPLKDVVEQ 160
>gi|379991152|ref|NP_001244016.1| E3 ubiquitin-protein ligase TRIM56 [Equus caballus]
Length = 771
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E N FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALNSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----EDGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|390332990|ref|XP_003723615.1| PREDICTED: uncharacterized protein LOC100891477 [Strongylocentrotus
purpuratus]
Length = 750
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C+ PK L C HT C CL + + +G +RCP+CRE T+PR G
Sbjct: 13 LVCAVCMNTL----KNPKSLSCRHTFCEECLKQCDEASQGRSGGIRCPMCREVTTLPRVG 68
Query: 91 VAALPPSFLVNQLLDLMSRQRRH---IIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
VA L + L+ ++L+++ ++ I C S +C C C C S+HS
Sbjct: 69 VAGLKSNPLIYRVLEVLEAKKNSTQIICDACGDSESPLTTYCRDCLHFICDSC--ASSHS 126
Query: 148 STS-GDSEHTIIPF------SIAIKRMSEILLYKANEC 178
+H +P +I IK M E L KA+EC
Sbjct: 127 KMKLLMKDHRTVPLDKIENGTIKIKWMEEGLWRKAHEC 164
>gi|410917736|ref|XP_003972342.1| PREDICTED: tripartite motif-containing protein 2-like isoform 2
[Takifugu rubripes]
Length = 760
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y+ PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYE----NPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELL------------F 128
P GVAAL +F + L+D++ R Q + + + +LL +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRTPGSFSQEAAALNSVTNVAAGQLLSCPNHGGNVMEFY 129
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
C C+T C +CT G + EH +P +++
Sbjct: 130 CPHCETAMCQECTNGEH-------GEHPTVPLKDVVEQ 160
>gi|284005036|ref|NP_001164683.1| tripartite motif protein [Saccoglossus kowalevskii]
gi|283464125|gb|ADB22646.1| tripartite motif protein [Saccoglossus kowalevskii]
Length = 483
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
V I+ ++F+E FLTC C Y+ E PK LPC HT C CLS S T CP
Sbjct: 7 VQISKDEFDERFLTCKLCEEPYNDEEKIPKYLPCLHTYCKSCLS----SHIGTTMEFDCP 62
Query: 79 ICREQITIPRGGVAALPPSFLV-NQLLDLMSRQ---RRHIIPKCSTHNSQE---LLFCET 131
CR++ P GV +P +F++ NQ ++++ ++ IP S + +Q+ + FC
Sbjct: 63 ECRQKTQTPHSGVDGIPNNFIIQNQRQYFVTQEKVTKKLFIPCQSCNRNQDASAISFCMN 122
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTIIP---FSIAIKRMSEILLYKANEC 178
C C C H+ + G H + P + + K + E +L + C
Sbjct: 123 CRAFLCNLCDEA--HAYSLGLKTHELKPMEELTASSKGIDESMLRRKTYC 170
>gi|260811450|ref|XP_002600435.1| hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae]
gi|229285722|gb|EEN56447.1| hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae]
Length = 722
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ +FNE FLTC C+ + P++LPC HT C CL Q L CP CR
Sbjct: 8 FTEFNEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWTTKQQ----PLECPTCRT 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQR--RHIIP--KCSTHNSQELLFCETCDTVFCL 138
Q+++P GV L +F VN LLD ++ ++ +P C + +C C + C
Sbjct: 60 QVSLPDQGVDGLRTNFFVNNLLDFVAAKKGAEPGVPCQVCKGNMEGSKSWCADCAILMCE 119
Query: 139 QCT 141
C
Sbjct: 120 SCN 122
>gi|321471266|gb|EFX82239.1| hypothetical protein DAPPUDRAFT_302643 [Daphnia pulex]
Length = 561
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 21/129 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F+TCG C C YD + PK L CSHTVCL CL I R+ T+ CP CR+ T
Sbjct: 8 EDFVTCGVCFCEYDDADKKPKFLQCSHTVCLSCLKGI-----RDGDTITCPFCRD--TFV 60
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRR------HIIPKCSTHNSQELLFCETCDTVFCLQCT 141
+ GV +LP + +L ++ ++P E+ +C TC + L C+
Sbjct: 61 KFGVESLPNNPYALHMLKFKEKKESPKPVEIAVVP-------VEVHWCLTCGSAEKLGCS 113
Query: 142 GGSNHSSTS 150
S HSS +
Sbjct: 114 -SSGHSSVN 121
>gi|345328741|ref|XP_001514346.2| PREDICTED: tripartite motif-containing protein 2 [Ornithorhynchus
anatinus]
Length = 871
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 143 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 195
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-----------------CSTHNSQEL-L 127
+P GV+AL +F + L+D++ R I + C H+ +
Sbjct: 196 LPEKGVSALQNNFFITNLMDVLQRTPGSNIEESSILETVTAVAAGKPLSCPNHDGNVMEF 255
Query: 128 FCETCDTVFCLQCTGG 143
+C++C+T C +CT G
Sbjct: 256 YCQSCETAMCRECTEG 271
>gi|260794818|ref|XP_002592404.1| hypothetical protein BRAFLDRAFT_67269 [Branchiostoma floridae]
gi|229277623|gb|EEN48415.1| hypothetical protein BRAFLDRAFT_67269 [Branchiostoma floridae]
Length = 598
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A G +CP CR+Q+ +P
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQGCLQDLAG----RGGPFQCPNCRQQVELPPQE 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR---------HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP S ++ L +++ Q R +CS H S+E+ L+CE C C+ C
Sbjct: 68 VAGLPDSHIIANLCEMLQTQARLSEETREQPQQENRCSFHPSEEVKLYCEQCHVPVCVDC 127
Query: 141 T--GGSNHSSTS 150
G H +T
Sbjct: 128 VEEGHDGHPTTG 139
>gi|47216281|emb|CAF96577.1| unnamed protein product [Tetraodon nigroviridis]
Length = 743
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y+ PK+LPC H+ C CL + + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRYE----NPKVLPCLHSFCERCLQNYIPAHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELL------------ 127
+P GVAAL +F + L+D++ R Q + + + +LL
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTPGSCSQEAAALNSVADAAAGQLLSCPNHGGNVMEF 128
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
+C C+T C +CT G + EH +P +++
Sbjct: 129 YCPHCETAMCQECTNGEH-------GEHPTVPLKDVVEQ 160
>gi|260810020|ref|XP_002599802.1| hypothetical protein BRAFLDRAFT_205810 [Branchiostoma floridae]
gi|229285084|gb|EEN55814.1| hypothetical protein BRAFLDRAFT_205810 [Branchiostoma floridae]
Length = 202
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 22/124 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQTRETGTLRCPICREQI 84
E FL C CL YD PK+LPC HT C CL ++ A T G L CP CR+
Sbjct: 9 ITEEFLVCQICLEDYD----RPKILPCLHTFCQGCLEKLPVAKSTDGPGKLSCPTCRQDA 64
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF---CETCD-----TVF 136
T+P+ GV AL +FLV +L D+M + ++ ++QE + C TC+ T +
Sbjct: 65 TLPKDGVRALKDNFLVTKLSDVMKQ---------TSDSAQEGMGEARCSTCEAGVHATSY 115
Query: 137 CLQC 140
C+ C
Sbjct: 116 CVDC 119
>gi|156402800|ref|XP_001639778.1| predicted protein [Nematostella vectensis]
gi|156226908|gb|EDO47715.1| predicted protein [Nematostella vectensis]
Length = 750
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S+ + +E L C CL Y TPK+LPC HT C HCL + S + CP
Sbjct: 3 SVEVDKLSEHLLKCPICLETY----RTPKVLPCLHTFCQHCLKGMIQSGEN---IIVCPT 55
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP----KCSTHNSQELLFCETCDTV 135
CR ++ +P+ GV+AL +F +N +LD +S + P C N+ C C
Sbjct: 56 CRCEVCVPKEGVSALSTNFFINNMLDFLSVALSNSKPIFCTNCEDRNTASSR-CIECMEF 114
Query: 136 FCLQCTGGSNHSSTSGDSEHTIIPFS 161
C QC H T EH I+ +
Sbjct: 115 LCEQCVAA--HKRTKLTKEHEILALN 138
>gi|405972294|gb|EKC37070.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 394
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS---RIAASQTRE-TGTLR 76
+ E F ++FL C C +D E PK+LPC HT CL CL R+ R T R
Sbjct: 73 FDEERFEDTFLKCLICRETFDEDEKMPKMLPCHHTFCLDCLKQMFRVEGEFRRNLTSAFR 132
Query: 77 ---------CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL- 126
CP CRE + + LP V +L+ + + + C H Q L
Sbjct: 133 SMPVAVKISCPTCREGLIASEAEILRLPNDHTVRELVAFVRCTGKPDVAYCKKHQMQPLN 192
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCP 186
FCE C T C CT +H +G H ++ A+ + +L E S+ K
Sbjct: 193 FFCEPCITPVCRDCT-VIDHKEKNG---HIVMNVEEALHKYVPVLDETLTEMESEEKTLH 248
Query: 187 ERKSNLRPSAHKADAYVRRRGAH 209
+++ L ++ + + G
Sbjct: 249 DKRMALEKASDNLEQIQKELGVQ 271
>gi|260815444|ref|XP_002602483.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
gi|229287793|gb|EEN58495.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
Length = 730
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR +
Sbjct: 10 DFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTHV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRH--IIP--KCSTHNSQELLFCETCDTVFCLQC 140
++P GV L +F VN LLD + ++ +P C +C C + C C
Sbjct: 62 SLPDQGVDGLRTNFYVNNLLDFAAVKKVAGPGVPCQVCEGKEEGARSWCVQCAVLLCESC 121
Query: 141 T 141
T
Sbjct: 122 T 122
>gi|260818146|ref|XP_002603945.1| hypothetical protein BRAFLDRAFT_102373 [Branchiostoma floridae]
gi|229289270|gb|EEN59956.1| hypothetical protein BRAFLDRAFT_102373 [Branchiostoma floridae]
Length = 433
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 21/133 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
LTC CL ++ PK+LPC HT CL CL +A GTL+C +CR+Q+ +PR
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGTLKCAVCRQQVRLPRQ 67
Query: 90 GVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
GVA+LP + + + + + +R++ +CS H ++E+ L+C+ C C +
Sbjct: 68 GVASLPDNLMAANMCEKLQNVTTLSGETREQPQSGNRCSFHPTEEVKLYCKQCKMPVCSE 127
Query: 140 C--TGGSNHSSTS 150
C G H +T
Sbjct: 128 CCEEGHDGHPTTG 140
>gi|260824627|ref|XP_002607269.1| hypothetical protein BRAFLDRAFT_88217 [Branchiostoma floridae]
gi|229292615|gb|EEN63279.1| hypothetical protein BRAFLDRAFT_88217 [Branchiostoma floridae]
Length = 661
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ + E FL C CL + PK+LPC HT C CL R+ ASQ L CP CR+
Sbjct: 6 FSEITEEFLVCQICLEDF----RQPKVLPCLHTFCQSCLERLLASQ--RVVQLSCPTCRQ 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ---ELLFCETCD-----T 134
+ +P GV L +FLV +L D++ +Q P+ + S ++ C TC+
Sbjct: 60 DVPLPENGVQGLKSNFLVGKLHDILRQQ-----PQGNGQTSDPGTVVVPCMTCERDNPAE 114
Query: 135 VFCLQCT 141
+C++CT
Sbjct: 115 FYCVECT 121
>gi|431898214|gb|ELK06909.1| Tripartite motif-containing protein 56 [Pteropus alecto]
Length = 763
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGGHLRCPECREN 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|156402802|ref|XP_001639779.1| predicted protein [Nematostella vectensis]
gi|156226909|gb|EDO47716.1| predicted protein [Nematostella vectensis]
Length = 264
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S+ + +E L C CL Y TPK+LPC HT C HCL + S + CP
Sbjct: 3 SVEVDKLSEHLLKCPICLETY----RTPKVLPCLHTFCQHCLKGMIQSGE---NIIVCPT 55
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP----KCSTHNSQELLFCETCDTV 135
CR ++ +P+ GV+AL +F +N +LD +S + P C N+ C C
Sbjct: 56 CRCEVCVPKEGVSALSTNFFINNMLDFLSVALSNSKPIFCTNCEDRNTASSR-CIECMEF 114
Query: 136 FCLQCTGGSNHSSTSGDSEHTIIPFS 161
C QC H T EH I+ +
Sbjct: 115 LCEQCVAA--HKRTKLTKEHEILALN 138
>gi|260806410|ref|XP_002598077.1| hypothetical protein BRAFLDRAFT_85706 [Branchiostoma floridae]
gi|229283348|gb|EEN54089.1| hypothetical protein BRAFLDRAFT_85706 [Branchiostoma floridae]
Length = 632
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 20/132 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL A + +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLRDHAEVKI----PFQCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP---------KCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + +V +++ + +Q +++ +CS H ++E+ L+C+ C+ C++C
Sbjct: 68 VAGLPDNHIVANMIEKLQKQEKNLEETTEQPQSGNRCSFHPTEEVKLYCKQCNVPVCIEC 127
Query: 141 --TGGSNHSSTS 150
G H +T
Sbjct: 128 CEEGHDGHPTTG 139
>gi|410984580|ref|XP_003998606.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Felis catus]
Length = 696
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----EGGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVN------QLLDLMS--------RQRRHIIPKCSTHNSQELLF- 128
+ +P GVAA +F VN +DL+ R +C H + L F
Sbjct: 63 VPVPPAGVAAFKTNFFVNGXXXXXXXVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL 122
Query: 129 CETCDTVFCLQC 140
C+ C + C +C
Sbjct: 123 CQPCSQLLCREC 134
>gi|260824806|ref|XP_002607358.1| hypothetical protein BRAFLDRAFT_69764 [Branchiostoma floridae]
gi|229292705|gb|EEN63368.1| hypothetical protein BRAFLDRAFT_69764 [Branchiostoma floridae]
Length = 1436
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 32/142 (22%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---------------- 69
F+E LTC CL ++ PK+LPC HT C CL +A+ +
Sbjct: 782 FHEE-LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASKRMPLIQGLASSRVSLLQG 836
Query: 70 -RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLM---------SRQRRHIIPKCS 119
L+CP CR+Q+ +P GV LP + LV L + + ++++ +CS
Sbjct: 837 LARRVPLQCPNCRQQVRLPPQGVTGLPDNHLVTSLCERLQNQATLSGETKEQPQSGNRCS 896
Query: 120 THNSQEL-LFCETCDTVFCLQC 140
H S+E+ L+C+ C+ C +C
Sbjct: 897 LHPSEEVKLYCKQCNMPVCSEC 918
>gi|443700444|gb|ELT99397.1| hypothetical protein CAPTEDRAFT_194410, partial [Capitella teleta]
Length = 294
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ + FL C CL G PK LPC HT C C++ ++ CPICR
Sbjct: 12 QNLRDQFLQCKICL----DGLKVPKTLPCLHTFCADCVAYYIDHNRLDSRKFSCPICRRH 67
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR----------QRRHIIPKCSTHNSQELLFCETCD 133
I IP+ GV P SF V L D++S+ Q I + + C C
Sbjct: 68 IYIPKNGVEGFPDSFFVETLNDVLSQSTAGGGGERGQAECGICRFKEGKVNATVLCVECK 127
Query: 134 TVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C C+ N + + HT++P S
Sbjct: 128 IALCGNCSEAHNDAKVT--ESHTLLPLS 153
>gi|291232806|ref|XP_002736345.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 607
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ +E LTC CL Y PK+LPC H+ C CL ++ S+ T++CP CR+Q
Sbjct: 9 DKIDEDLLTCAVCLERY----KNPKILPCYHSFCEQCLVKLKGSR----DTIKCPNCRQQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH--------IIPK-------CSTHNSQEL-L 127
+ + V+ L PS ++N +D++ Q +H ++ K C++H + L
Sbjct: 61 LYVR--NVSQLQPSMVINSAIDIIEDQTKHRGNETCHGVVKKTHRKTVHCTSHKDKLCEL 118
Query: 128 FCETCDTVFCLQC-TGGSNH 146
+CE C C C T SNH
Sbjct: 119 YCEKCRVPICSMCLTTRSNH 138
>gi|345801259|ref|XP_003434792.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Canis lupus
familiaris]
Length = 771
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----EGGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260794808|ref|XP_002592399.1| hypothetical protein BRAFLDRAFT_67264 [Branchiostoma floridae]
gi|229277618|gb|EEN48410.1| hypothetical protein BRAFLDRAFT_67264 [Branchiostoma floridae]
Length = 912
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A+ + +CP CR+Q +P G
Sbjct: 16 LTCSICLELFT----KPKVLPCGHTFCQDCLQDHASRRV----PFQCPNCRQQFRLPLQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP S +V L + + Q + +CS H S+E+ L+C+ C C +C
Sbjct: 68 VAGLPDSHIVANLCERLQTQATLSKETSEQPQSGNRCSFHPSEEVRLYCKQCKVPICHEC 127
>gi|260827663|ref|XP_002608784.1| hypothetical protein BRAFLDRAFT_110072 [Branchiostoma floridae]
gi|229294136|gb|EEN64794.1| hypothetical protein BRAFLDRAFT_110072 [Branchiostoma floridae]
Length = 618
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G L+CP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGALQCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + LV L L +R++ +CS H S++L L+C+ C C+ C
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGKTREQPQSGNRCSFHPSEKLKLYCKPCQVPLCVDC 127
Query: 141 TGGSNHSS 148
NH
Sbjct: 128 V-EDNHDG 134
>gi|291231823|ref|XP_002735871.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 774
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
++ ED +++FL C C+ PK+LPC HT C CL + + G L CP+
Sbjct: 6 TVKTEDLDQNFLQCAFCIERL----RKPKILPCLHTFCEVCLGQWV---RKNVGKLICPV 58
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLM-SRQRRHIIPKCSTHNSQE--LLFCETCDTVF 136
CR + +P G+ LP +F +N ++D + +R+ H ++ + +C C
Sbjct: 59 CRNEYPLPEKGIMGLPDNFFINNMIDFLEARKNGKAASSVPCHGCEKGAVTYCSDCTEFL 118
Query: 137 CLQCT 141
C C+
Sbjct: 119 CSDCS 123
>gi|260811694|ref|XP_002600557.1| hypothetical protein BRAFLDRAFT_70065 [Branchiostoma floridae]
gi|229285844|gb|EEN56569.1| hypothetical protein BRAFLDRAFT_70065 [Branchiostoma floridae]
Length = 923
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF++ FLTC C+ + P++LPC HT C CL Q L CP CR Q+
Sbjct: 11 DFDKQFLTCPVCMLHF----RDPRVLPCLHTFCRECLQEWTTKQQ----PLECPTCRTQV 62
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRH--IIP--KCSTHNSQELLFCETCDTVFCLQC 140
++P GV L +F VN +LD + ++ +P C +C C + C C
Sbjct: 63 SLPDQGVDGLRTNFYVNNMLDFAAVKKGAGPGVPCQVCEGKGEGVRSWCVQCAVLLCESC 122
Query: 141 T 141
T
Sbjct: 123 T 123
>gi|260818737|ref|XP_002604539.1| hypothetical protein BRAFLDRAFT_148637 [Branchiostoma floridae]
gi|229289866|gb|EEN60550.1| hypothetical protein BRAFLDRAFT_148637 [Branchiostoma floridae]
Length = 226
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTCG CL ++ PK+LPC HT C CL +A G +CPICR+Q+ +P
Sbjct: 17 LTCGICLELFT----RPKVLPCQHTFCQDCLQDLAGR----AGAFQCPICRQQVRLPPQR 68
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + + + + + +R++ +CS H S+E+ L+C+ C+ C++C
Sbjct: 69 VPGLPDNLIAANMCERLQNQATLSGETREQPQSGNRCSFHPSEEVKLYCKQCNVPVCIEC 128
>gi|260832804|ref|XP_002611347.1| hypothetical protein BRAFLDRAFT_210810 [Branchiostoma floridae]
gi|229296718|gb|EEN67357.1| hypothetical protein BRAFLDRAFT_210810 [Branchiostoma floridae]
Length = 88
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 8 DITDEFLVCQVCL----EDLKQPKMLPCLHTFCQSCLEKLLA--TEPVGKLDCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+PR GV L +FLV +L D++ +Q
Sbjct: 62 PLPRNGVQGLKSNFLVGKLRDILQQQ 87
>gi|260833090|ref|XP_002611490.1| hypothetical protein BRAFLDRAFT_63875 [Branchiostoma floridae]
gi|229296861|gb|EEN67500.1| hypothetical protein BRAFLDRAFT_63875 [Branchiostoma floridae]
Length = 899
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E FL C C Y PK+LPC HT C CL ++ A + G L CP CR + +P
Sbjct: 11 EEFLVCQICFEDY----REPKVLPCQHTFCKECLEKMVA----KMGKLTCPNCRRECPLP 62
Query: 88 RGGVAALPPSFLVNQLLDLM 107
+ GV P SF VN+L D++
Sbjct: 63 QNGVGGFPTSFFVNKLRDIV 82
>gi|260833176|ref|XP_002611533.1| hypothetical protein BRAFLDRAFT_63830 [Branchiostoma floridae]
gi|229296904|gb|EEN67543.1| hypothetical protein BRAFLDRAFT_63830 [Branchiostoma floridae]
Length = 1310
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLEEFLKKQKVKT-DLDCPTCRSKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT-----VFCLQC 140
+P GGVA L +F V L D + ++ N E L C +C+T FC +C
Sbjct: 65 LPGGGVAELKDNFFVESLKDTVDVHKK-------LTNEGESLVCGSCETKSGVESFCTEC 117
>gi|119589116|gb|EAW68710.1| tripartite motif-containing 3, isoform CRA_b [Homo sapiens]
Length = 665
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|12407375|gb|AAG53476.1|AF220022_1 tripartite motif protein TRIM3 isoform gamma [Homo sapiens]
Length = 665
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPFSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|12407373|gb|AAG53475.1|AF220021_1 tripartite motif protein TRIM3 isoform beta [Homo sapiens]
Length = 733
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPFSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|260816139|ref|XP_002602829.1| hypothetical protein BRAFLDRAFT_236493 [Branchiostoma floridae]
gi|229288142|gb|EEN58841.1| hypothetical protein BRAFLDRAFT_236493 [Branchiostoma floridae]
Length = 192
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
++CG CL + PK+LPC HT C CL A G LRCP CR + I +GG
Sbjct: 1 MSCGICLQPF----KLPKILPCGHTFCEECLVEAA------RGGLRCPTCRNVVPI-KGG 49
Query: 91 VAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGG 143
VAALP ++ V ++ S + C H +++L LFC+TC+ C +C
Sbjct: 50 VAALPNNYQVAEMCQKFSELAAARDATQQWDAACKNHPTEKLRLFCQTCEEPVCNECLDD 109
Query: 144 SNH 146
S H
Sbjct: 110 SAH 112
>gi|260792082|ref|XP_002591056.1| hypothetical protein BRAFLDRAFT_69390 [Branchiostoma floridae]
gi|229276256|gb|EEN47067.1| hypothetical protein BRAFLDRAFT_69390 [Branchiostoma floridae]
Length = 648
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 19/121 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PK+LPC HT CL CL +A G +CP+CR+Q+ +P
Sbjct: 16 LSCSVCLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGAFQCPVCRQQVRLPPQ 67
Query: 90 GVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
GVA LP + + + + + +R++ +CS H S+E+ L+C+ C+ C +
Sbjct: 68 GVAGLPDNLMAANMCERLQNQATLSGETREQPQSGNRCSFHPSEEVKLYCKQCNMPVCTE 127
Query: 140 C 140
C
Sbjct: 128 C 128
>gi|260824866|ref|XP_002607388.1| hypothetical protein BRAFLDRAFT_69798 [Branchiostoma floridae]
gi|229292735|gb|EEN63398.1| hypothetical protein BRAFLDRAFT_69798 [Branchiostoma floridae]
Length = 614
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+E+ LTC CL ++ PK+LPC HT C CL I + Q L+CPICR+
Sbjct: 8 FEEQIREELTCSICLELFT----RPKVLPCQHTFCQDCLQDIVSRQV----PLQCPICRQ 59
Query: 83 QITIPRGGVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETC 132
Q P GV LP + LV L + + +R++ +CS H S++L L+C+ C
Sbjct: 60 QARPPPQGVEGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEKLKLYCKPC 119
Query: 133 DTVFCLQCT 141
C+ C
Sbjct: 120 QVPLCVDCV 128
>gi|119589120|gb|EAW68714.1| tripartite motif-containing 3, isoform CRA_e [Homo sapiens]
Length = 760
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|119589117|gb|EAW68711.1| tripartite motif-containing 3, isoform CRA_c [Homo sapiens]
Length = 733
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|119589123|gb|EAW68717.1| tripartite motif-containing 3, isoform CRA_g [Homo sapiens]
Length = 668
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|12407371|gb|AAG53474.1|AF220020_1 tripartite motif protein TRIM3 isoform alpha [Homo sapiens]
gi|3273699|gb|AAC24809.1| brain expressed ring finger protein [Homo sapiens]
Length = 744
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPFSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|221042794|dbj|BAH13074.1| unnamed protein product [Homo sapiens]
Length = 741
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|32454737|ref|NP_150594.2| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|32454739|ref|NP_006449.2| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|351721563|ref|NP_001234935.1| tripartite motif-containing protein 3 isoform 1 [Homo sapiens]
gi|332835738|ref|XP_001164502.2| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Pan
troglodytes]
gi|397496607|ref|XP_003819123.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Pan
paniscus]
gi|397496609|ref|XP_003819124.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Pan
paniscus]
gi|397496611|ref|XP_003819125.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Pan
paniscus]
gi|397496613|ref|XP_003819126.1| PREDICTED: tripartite motif-containing protein 3 isoform 4 [Pan
paniscus]
gi|215273906|sp|O75382.2|TRIM3_HUMAN RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=Brain-expressed RING finger protein; AltName:
Full=RING finger protein 22; AltName: Full=RING finger
protein 97
gi|66911192|gb|AAH96827.1| Tripartite motif-containing 3 [Homo sapiens]
gi|119589115|gb|EAW68709.1| tripartite motif-containing 3, isoform CRA_a [Homo sapiens]
gi|158256228|dbj|BAF84085.1| unnamed protein product [Homo sapiens]
gi|168278076|dbj|BAG11016.1| tripartite motif-containing protein 3 [synthetic construct]
gi|410212246|gb|JAA03342.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410212248|gb|JAA03343.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410251376|gb|JAA13655.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410296534|gb|JAA26867.1| tripartite motif-containing 3 [Pan troglodytes]
gi|410339445|gb|JAA38669.1| tripartite motif-containing 3 [Pan troglodytes]
Length = 744
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|296217391|ref|XP_002754989.1| PREDICTED: tripartite motif-containing protein 3 isoform 2
[Callithrix jacchus]
gi|296217393|ref|XP_002754990.1| PREDICTED: tripartite motif-containing protein 3 isoform 3
[Callithrix jacchus]
Length = 744
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMDFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|395815117|ref|XP_003781082.1| PREDICTED: tripartite motif-containing protein 3 isoform 1
[Otolemur garnettii]
gi|395815119|ref|XP_003781083.1| PREDICTED: tripartite motif-containing protein 3 isoform 2
[Otolemur garnettii]
Length = 744
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|62122935|ref|NP_001014393.1| tripartite motif-containing protein 2 [Danio rerio]
gi|61402577|gb|AAH91789.1| Zgc:113099 [Danio rerio]
Length = 744
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y+ PK+LPC HT C CL + TL CP+CR+
Sbjct: 16 IDKQFLICSICLDRYN----NPKVLPCLHTFCERCLQNYIPPHSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK----------------CSTHNSQEL-LF 128
+P GVAAL +F + L++++ + + + C H + +
Sbjct: 69 LPEKGVAALQSNFFITNLMEVLKKSPNSNLSEDYTDAINGVATGQPLSCPNHGGNVMEFY 128
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
C C+T C +CT G + +EH +P +++
Sbjct: 129 CPPCETAMCEECTSGEH-------AEHATVPLKDVLEQ 159
>gi|403254097|ref|XP_003919815.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403254099|ref|XP_003919816.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403254101|ref|XP_003919817.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Saimiri
boliviensis boliviensis]
gi|403254103|ref|XP_003919818.1| PREDICTED: tripartite motif-containing protein 3 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 744
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|388454687|ref|NP_001253130.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|402894369|ref|XP_003910335.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Papio
anubis]
gi|402894371|ref|XP_003910336.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Papio
anubis]
gi|402894373|ref|XP_003910337.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Papio
anubis]
gi|355566763|gb|EHH23142.1| RING finger protein 22 [Macaca mulatta]
gi|355752378|gb|EHH56498.1| RING finger protein 22 [Macaca fascicularis]
gi|380808868|gb|AFE76309.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|383415231|gb|AFH30829.1| tripartite motif-containing protein 3 [Macaca mulatta]
Length = 744
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQASDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|417404323|gb|JAA48921.1| Putative e3 ubiquitin-protein ligase trim56 [Desmodus rotundus]
Length = 745
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHLRCPECREN 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVK 87
>gi|417412644|gb|JAA52699.1| Putative e3 ubiquitin ligase, partial [Desmodus rotundus]
Length = 772
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 43 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 96 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 155
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 156 EACETAMCGECRAG 169
>gi|119589118|gb|EAW68712.1| tripartite motif-containing 3, isoform CRA_d [Homo sapiens]
gi|119589119|gb|EAW68713.1| tripartite motif-containing 3, isoform CRA_d [Homo sapiens]
Length = 511
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIP-------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGGSN 145
E C+T C +C G +
Sbjct: 128 EACETAMCGECRAGEH 143
>gi|260795386|ref|XP_002592686.1| hypothetical protein BRAFLDRAFT_67125 [Branchiostoma floridae]
gi|229277909|gb|EEN48697.1| hypothetical protein BRAFLDRAFT_67125 [Branchiostoma floridae]
Length = 360
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 16 VETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL 75
V T+S+ + E LTC CL +++ PK+LPC HT C CL ++ ++ T
Sbjct: 6 VATLSLGEQIHEE--LTCSICLELFN----KPKVLPCQHTFCQGCLQQLTLNK---TTLF 56
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LF 128
+CP+C + P GV ALP + LV L + Q +R +C H S+E+ L+
Sbjct: 57 QCPVCSQWARKPCQGVKALPDNILVTTLQMRVQHQATPVKRKRESKDRCVLHQSEEIKLY 116
Query: 129 CETCDTVFCLQCTGGSNHSS 148
C+ CD C +C NHS
Sbjct: 117 CQQCDVPVCNECL-DQNHSD 135
>gi|405969111|gb|EKC34117.1| hypothetical protein CGI_10014955 [Crassostrea gigas]
Length = 1363
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGTLRCPICREQITIPRG 89
++C C + + PKLLPC HT+C C+ I AS T++CPICR+ IP+
Sbjct: 864 ISCPICAYQFSTPDKVPKLLPCYHTICSPCIDSIIASTPLNSDSTIKCPICRQGANIPKN 923
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSST 149
GV +F + + Q+ C ++++L C+ C ++ C+ C +H T
Sbjct: 924 GVEGFFDNFFRS------APQQEETCDICGAQDTRKLEHCKECLSLLCVSCGDAHHHQKT 977
Query: 150 SGDSE 154
S E
Sbjct: 978 SKHDE 982
>gi|344280668|ref|XP_003412104.1| PREDICTED: tripartite motif-containing protein 3 [Loxodonta
africana]
Length = 744
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHNPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|291384493|ref|XP_002708807.1| PREDICTED: tripartite motif-containing 3 [Oryctolagus cuniculus]
Length = 743
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|56749780|sp|Q80VI1.1|TRI56_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM56; AltName:
Full=Tripartite motif-containing protein 56
gi|28278996|gb|AAH45615.1| Trim56 protein [Mus musculus]
gi|148687336|gb|EDL19283.1| tripartite motif-containing 56, isoform CRA_a [Mus musculus]
gi|148687337|gb|EDL19284.1| tripartite motif-containing 56, isoform CRA_a [Mus musculus]
Length = 734
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++ G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLDIG-----GQVRCPECREI 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPAEGVAAFKTNFFVNGLLDLVK 87
>gi|351703801|gb|EHB06720.1| Tripartite motif-containing protein 3 [Heterocephalus glaber]
Length = 744
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR----QRRHIIP-----------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + R P C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQVPDGARDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|444524489|gb|ELV13855.1| Tripartite motif-containing protein 3 [Tupaia chinensis]
Length = 744
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|348558986|ref|XP_003465297.1| PREDICTED: tripartite motif-containing protein 3-like [Cavia
porcellus]
Length = 744
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|155372039|ref|NP_001094627.1| tripartite motif-containing protein 3 [Bos taurus]
gi|154425886|gb|AAI51316.1| TRIM3 protein [Bos taurus]
gi|296480026|tpg|DAA22141.1| TPA: tripartite motif-containing 3 [Bos taurus]
Length = 744
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|41235779|ref|NP_958761.1| E3 ubiquitin-protein ligase TRIM56 [Mus musculus]
gi|26332124|dbj|BAC29792.1| unnamed protein product [Mus musculus]
Length = 734
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++ G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLDIG-----GQVRCPECREI 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPAEGVAAFKTNFFVNGLLDLVK 87
>gi|73988285|ref|XP_534038.2| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Canis
lupus familiaris]
Length = 744
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|405965350|gb|EKC30731.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 482
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E E L C C+ Y P++LPC HTVCL+CL + RCP CR
Sbjct: 46 ERLRERILQCPICIDEY----KDPRILPCHHTVCLNCLLDYVRHSSSSGRLFRCPQCRSD 101
Query: 84 ITIPRGGVAALPPSFLVNQLLD-LMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQC 140
I +PRGGV PP+F VN + D L SR I C C CD C C
Sbjct: 102 ICVPRGGVKDFPPNFYVNCIQDELGSRPYFGICDICERDWLISQYRCVDCDLDICRFC 159
>gi|293341115|ref|XP_001076813.2| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like [Rattus
norvegicus]
gi|149062960|gb|EDM13283.1| rCG21693, isoform CRA_a [Rattus norvegicus]
gi|149062961|gb|EDM13284.1| rCG21693, isoform CRA_a [Rattus norvegicus]
Length = 734
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++ G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLDIG-----GQVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|345788474|ref|XP_003433077.1| PREDICTED: tripartite motif-containing protein 3 [Canis lupus
familiaris]
Length = 745
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 16 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 69 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 128
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 129 EACETAMCGECRAG 142
>gi|149719405|ref|XP_001504641.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Equus
caballus]
Length = 744
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR----QRRHIIP-----------KCSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + R P C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGARDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|432093140|gb|ELK25398.1| Tripartite motif-containing protein 3 [Myotis davidii]
Length = 772
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|410973073|ref|XP_003992980.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Felis
catus]
Length = 745
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 16 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 69 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 128
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 129 EACETAMCGECRAG 142
>gi|410973071|ref|XP_003992979.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Felis
catus]
Length = 744
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|354501663|ref|XP_003512909.1| PREDICTED: tripartite motif-containing protein 3 [Cricetulus
griseus]
gi|344257591|gb|EGW13695.1| Tripartite motif-containing protein 3 [Cricetulus griseus]
Length = 744
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|260824810|ref|XP_002607360.1| hypothetical protein BRAFLDRAFT_69766 [Branchiostoma floridae]
gi|229292707|gb|EEN63370.1| hypothetical protein BRAFLDRAFT_69766 [Branchiostoma floridae]
Length = 627
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
LTCG C ++ PK+LPC HT CL CL +A G +CPICR+Q+++P
Sbjct: 16 LTCGICKDLFT----KPKVLPCQHTFCLSPCLENLAG----RGGAFQCPICRQQVSLPPQ 67
Query: 90 GVAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
GV P + + + L +R++ +CS H S+E+ L+C+ C+ C
Sbjct: 68 GVTGFPDNLMAANMCESLRNEATLSGETREQPQSGHRCSFHPSEEVKLYCKQCNVPVCTD 127
Query: 140 C--TGGSNHSSTS 150
C G H +T
Sbjct: 128 CCEEGHDGHPTTG 140
>gi|301791351|ref|XP_002930649.1| PREDICTED: tripartite motif-containing protein 56-like [Ailuropoda
melanoleuca]
gi|281349522|gb|EFB25106.1| hypothetical protein PANDA_021148 [Ailuropoda melanoleuca]
Length = 777
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHLRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260808708|ref|XP_002599149.1| hypothetical protein BRAFLDRAFT_81816 [Branchiostoma floridae]
gi|229284425|gb|EEN55161.1| hypothetical protein BRAFLDRAFT_81816 [Branchiostoma floridae]
Length = 610
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PKLLPC HT C CL + + GT +C CR Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKLLPCQHTFCQDCLQELTGGE----GTFQCQNCRLQVELPSEG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR--------HIIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
V LP S ++ + + + Q + +C H+S+EL L+C+ C C QC
Sbjct: 68 VTGLPDSCIMANMCERLHNQAKVKETNEQPQSGNRCIFHSSEELKLYCKQCQMPVCEQCL 127
Query: 142 GGS--NHSSTS 150
G+ NH +T+
Sbjct: 128 EGTHDNHGTTT 138
>gi|301779217|ref|XP_002925020.1| PREDICTED: tripartite motif-containing protein 3-like [Ailuropoda
melanoleuca]
gi|281338585|gb|EFB14169.1| hypothetical protein PANDA_014455 [Ailuropoda melanoleuca]
Length = 744
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F + L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFITSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|260785668|ref|XP_002587882.1| hypothetical protein BRAFLDRAFT_87269 [Branchiostoma floridae]
gi|229273037|gb|EEN43893.1| hypothetical protein BRAFLDRAFT_87269 [Branchiostoma floridae]
Length = 618
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G +CP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGAFQCPNCRQQVRLPCNG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + LV L + + +R++ +CS H S++L L+C+ C C+ C
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGETREQPQSGHRCSFHPSEKLKLYCKPCQVPLCVDC 127
Query: 141 T 141
Sbjct: 128 V 128
>gi|260822978|ref|XP_002603960.1| hypothetical protein BRAFLDRAFT_71752 [Branchiostoma floridae]
gi|229289285|gb|EEN59971.1| hypothetical protein BRAFLDRAFT_71752 [Branchiostoma floridae]
Length = 629
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A + +CP CR+Q+ +P G
Sbjct: 38 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAGRER----AFQCPNCRQQVRLPPQG 89
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP ++LV L + + +R++ +CS H S+ L L+C+ C C QC
Sbjct: 90 VAGLPDNYLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEVLELYCKHCQIPICKQC 149
>gi|260787425|ref|XP_002588753.1| hypothetical protein BRAFLDRAFT_89820 [Branchiostoma floridae]
gi|229273923|gb|EEN44764.1| hypothetical protein BRAFLDRAFT_89820 [Branchiostoma floridae]
Length = 798
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G RCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAGR----GGAFRCPNCRQQVRLPHQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ-----RRHIIPK----CSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + LV+ L + +Q +P+ C+ H S++L L+C+ C C C
Sbjct: 68 VAGLPDNHLVSSLCATLQKQATLSGETAEVPRAENLCNFHPSEKLKLYCKPCQIPICELC 127
>gi|260782170|ref|XP_002586164.1| hypothetical protein BRAFLDRAFT_255110 [Branchiostoma floridae]
gi|229271257|gb|EEN42175.1| hypothetical protein BRAFLDRAFT_255110 [Branchiostoma floridae]
Length = 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
F E LTC CL ++ PK+LPC HT C CL +A+ + +CP CR+Q+
Sbjct: 11 QFKEE-LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASRKV----LFQCPNCRQQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQEL-LFCETCDT 134
T+P GVA LP + LV L + + Q + +CS H S++L L+C+ C
Sbjct: 62 TLPTQGVAGLPQNHLVTSLCERLQNQATLSEETSEQPQSGHRCSFHPSEKLKLYCKPCQV 121
Query: 135 VFCLQCT--GGSNHSSTS 150
C+ C G H + S
Sbjct: 122 PLCVDCVEEGHDGHPNIS 139
>gi|260826073|ref|XP_002607990.1| hypothetical protein BRAFLDRAFT_213655 [Branchiostoma floridae]
gi|229293340|gb|EEN64000.1| hypothetical protein BRAFLDRAFT_213655 [Branchiostoma floridae]
Length = 91
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 11 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLEKLLA--TEPVGKLDCPTCRQDV 64
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+P GV L +FLV +L D++ +Q
Sbjct: 65 PLPENGVQGLKSNFLVGKLRDILQQQ 90
>gi|118358184|ref|XP_001012341.1| Kelch motif family protein [Tetrahymena thermophila]
gi|89294107|gb|EAR92095.1| Kelch motif family protein [Tetrahymena thermophila SB210]
Length = 695
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C C +YD +H P+ LPC HT C CL +I + G + CP CR++++ P
Sbjct: 1 MECPMCYILYDEKKHIPRNLPCGHTFCELCLQQILQPK----GFIECPSCRKKLS-PDVR 55
Query: 91 VAALPPSFLVNQLLDLMSRQR--RHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
+L +F+ LDL +Q + + C TH +L FCE C C QC NHS
Sbjct: 56 PESLSKNFIA---LDLALKQHQLQSKLQLCDTHQEFQLFFCEDCQEHLCTQCI--INHS 109
>gi|260792740|ref|XP_002591372.1| hypothetical protein BRAFLDRAFT_93992 [Branchiostoma floridae]
gi|229276577|gb|EEN47383.1| hypothetical protein BRAFLDRAFT_93992 [Branchiostoma floridae]
Length = 674
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+F+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q+
Sbjct: 10 NFDEQFLTCPVCMLHF----RDPRVLPCLHTFCRDCLQEWATKQQ----PLECPTCRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRH--IIP--KCSTHNSQELLFCETCDTVFCLQC 140
++P GV L +F V+ LLD + ++ +P C +C C + C C
Sbjct: 62 SLPDQGVDGLRTNFYVSNLLDFAAVKKGAGPGVPCQVCEGKGEGARSWCVQCAVLLCESC 121
Query: 141 T 141
T
Sbjct: 122 T 122
>gi|390334568|ref|XP_003723958.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 398
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 14 TLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG 73
T+ ET + +D E FLTC CL + PK+LPC H C CL + S+++E G
Sbjct: 2 TMAETAASLAKDLREEFLTCSLCLTCF----SRPKMLPCQHVFCTRCLHKWYESKSKENG 57
Query: 74 ----TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
T+ CP+CR T+P G+ P S + L++ +
Sbjct: 58 AQAKTVTCPMCRVSQTVPASGILGFPDSHAMTSLMNFLD 96
>gi|260818134|ref|XP_002603939.1| hypothetical protein BRAFLDRAFT_102380 [Branchiostoma floridae]
gi|229289264|gb|EEN59950.1| hypothetical protein BRAFLDRAFT_102380 [Branchiostoma floridae]
Length = 714
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PK+LPC HT CL CL +A G L+C ICR+Q+ +P
Sbjct: 18 LSCSICLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGALKCAICRQQVRLPPQ 69
Query: 90 GVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
GVA LP + LV L + + ++++ +CS H S+ L L+C+ C C Q
Sbjct: 70 GVAGLPDNHLVTSLCERLQNQATLSGETKEQPQSGNRCSFHPSEVLELYCKHCHIAICKQ 129
Query: 140 C 140
C
Sbjct: 130 C 130
>gi|330864765|ref|NP_001193503.1| E3 ubiquitin-protein ligase TRIM56 [Bos taurus]
Length = 755
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVK 87
>gi|291413198|ref|XP_002722861.1| PREDICTED: tripartite motif-containing 56 isoform 1 [Oryctolagus
cuniculus]
Length = 758
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVK 87
>gi|322967632|sp|E1BD59.1|TRI56_BOVIN RecName: Full=E3 ubiquitin-protein ligase TRIM56; AltName:
Full=Tripartite motif-containing protein 56
Length = 732
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVK 87
>gi|296473018|tpg|DAA15133.1| TPA: tripartite motif protein 2-like [Bos taurus]
gi|440908417|gb|ELR58431.1| Tripartite motif-containing protein 56 [Bos grunniens mutus]
Length = 755
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVK 87
>gi|291233509|ref|XP_002736695.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1445
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 16/117 (13%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D +E FL+C CL +Y PK+LPC HT C CL A + G L+C CR Q
Sbjct: 14 DISEDFLSCSICLEIYK----NPKVLPCLHTFCQQCLVTFKA---KSGGVLKCATCRIQC 66
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFC-ETCDTVFCLQC 140
P + L +F ++ LLD RQR + ST + QE C E T C+ C
Sbjct: 67 DTP---IQELKSNFFLSSLLDTYQRQR-----QLSTDHPQECEICQEKTATHMCVDC 115
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ NE FL+C CL +Y P +LPC HT C CL + A + G L+C CR Q
Sbjct: 732 DEINEDFLSCSICLDIYK----NPTVLPCLHTFCQQCLVTLKA---KSGGVLKCATCRIQ 784
Query: 84 ITIPRGGVAALPPSFLVNQLLDL----MSRQRRHIIPKC----STHNSQELL--FCETCD 133
P + L + ++ LL +S H+ C +TH + L C+ C
Sbjct: 785 CDTP---IKKLKSNLFLSSLLHTYQTRLSLDHSHVCEICQEKIATHRCVDCLQFICDECF 841
Query: 134 TV 135
T+
Sbjct: 842 TI 843
>gi|13929112|ref|NP_113974.1| tripartite motif-containing protein 3 [Rattus norvegicus]
gi|21362968|sp|O70277.1|TRIM3_RAT RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=Brain-expressed RING finger protein; AltName:
Full=RING finger protein 22
gi|3170009|gb|AAC17997.1| RING finger protein [Rattus norvegicus]
Length = 744
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|33468961|ref|NP_061368.1| tripartite motif-containing protein 3 [Mus musculus]
gi|21363044|sp|Q9R1R2.1|TRIM3_MOUSE RecName: Full=Tripartite motif-containing protein 3; AltName:
Full=RING finger protein 22; AltName: Full=RING finger
protein HAC1
gi|12407369|gb|AAG53473.1|AF220019_1 tripartite motif protein TRIM3 [Mus musculus]
gi|5732193|dbj|BAA83343.1| RING finger protein HAC1 [Mus musculus]
gi|12859230|dbj|BAB31580.1| unnamed protein product [Mus musculus]
gi|21706538|gb|AAH34263.1| Trim3 protein [Mus musculus]
gi|74194823|dbj|BAE26003.1| unnamed protein product [Mus musculus]
gi|148684839|gb|EDL16786.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
gi|148684840|gb|EDL16787.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
gi|148684841|gb|EDL16788.1| tripartite motif protein 3, isoform CRA_a [Mus musculus]
Length = 744
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPEGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|260823248|ref|XP_002604095.1| hypothetical protein BRAFLDRAFT_71616 [Branchiostoma floridae]
gi|260823282|ref|XP_002604112.1| hypothetical protein BRAFLDRAFT_71600 [Branchiostoma floridae]
gi|229289420|gb|EEN60106.1| hypothetical protein BRAFLDRAFT_71616 [Branchiostoma floridae]
gi|229289437|gb|EEN60123.1| hypothetical protein BRAFLDRAFT_71600 [Branchiostoma floridae]
Length = 618
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A G +CPICR+Q+ +P
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGGAFQCPICRQQVRLPPQR 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + LV L + + +R++ +CS H S+ L +FC+ C C QC
Sbjct: 68 VAGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEVLKVFCKQCQIPVCDQC 127
>gi|149068478|gb|EDM18030.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068479|gb|EDM18031.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068480|gb|EDM18032.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149068481|gb|EDM18033.1| tripartite motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 744
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 128 EACETAMCGECRAG 141
>gi|260834257|ref|XP_002612128.1| hypothetical protein BRAFLDRAFT_96076 [Branchiostoma floridae]
gi|229297501|gb|EEN68137.1| hypothetical protein BRAFLDRAFT_96076 [Branchiostoma floridae]
Length = 354
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF + FLTC C+ Y P++LPC HT CL A Q L CP CR Q+
Sbjct: 10 DFGDQFLTCSVCMLRY----RDPRVLPCFHTFYKECLKLWATQQQ----PLECPACRTQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR---RHIIP--------KCSTHNSQELLFC 129
++P GV L +F VN+LLD + ++ +P K + H + +LFC
Sbjct: 62 SLPDQGVDGLRTNFYVNKLLDFAAVKKGAGSGSVPCQVCETRRKGNGHGAYSVLFC 117
>gi|291413200|ref|XP_002722862.1| PREDICTED: tripartite motif-containing 56 isoform 2 [Oryctolagus
cuniculus]
Length = 730
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVK 87
>gi|74199723|dbj|BAE41519.1| unnamed protein product [Mus musculus]
Length = 717
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQAPEGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 127
Query: 130 ETCDTVFCLQCTGGS 144
E C+T C +C G
Sbjct: 128 EACETAMCGECRAGE 142
>gi|260830144|ref|XP_002610021.1| hypothetical protein BRAFLDRAFT_99973 [Branchiostoma floridae]
gi|229295384|gb|EEN66031.1| hypothetical protein BRAFLDRAFT_99973 [Branchiostoma floridae]
Length = 614
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL R CP CR Q+T+P G
Sbjct: 16 LSCSICLDLFS----RPKVLPCMHTFCQDCL----GDHARARQPFECPNCRLQVTLPTQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIP-----------KCSTHNSQEL-LFCETCDTVFCL 138
V LP + LV L + +S+Q + + KC H +EL L+CE C C
Sbjct: 68 VPGLPDNHLVANLCERISKQVKLPVKTPDQSQTQPENKCIFHPWEELKLYCEQCQLSVCT 127
Query: 139 QCTG 142
+C G
Sbjct: 128 ECMG 131
>gi|260806462|ref|XP_002598103.1| hypothetical protein BRAFLDRAFT_85679 [Branchiostoma floridae]
gi|229283374|gb|EEN54115.1| hypothetical protein BRAFLDRAFT_85679 [Branchiostoma floridae]
Length = 711
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
++YE E L+C CL Y PK+LPC HT C CL T G +CP
Sbjct: 5 QLSYEALLEE-LSCSICLEPYT----RPKVLPCQHTFCQDCLQEF----TGRGGAFQCPN 55
Query: 80 CREQITIPRGGVAALPPSF----LVNQLLDLMSRQ-------RRHIIP--KCSTHNSQEL 126
CR+Q+T+P GVA LP S ++ + + + +Q R P +CS H S+ L
Sbjct: 56 CRQQVTLPSKGVAGLPDSHDHINIIANMFERLQQQTSLSEETREQPQPGNRCSFHPSEVL 115
Query: 127 -LFCETCDTVFCLQC 140
++C+ C+ C QC
Sbjct: 116 KVYCKQCEVPVCDQC 130
>gi|297680082|ref|XP_002817834.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Pongo
abelii]
gi|395738243|ref|XP_003777052.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Pongo
abelii]
Length = 755
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPSEGVAAFKTNFFVNGLLDLVK 87
>gi|327290338|ref|XP_003229880.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
TRIM56-like [Anolis carolinensis]
Length = 651
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+E FL+C CL + PK+LPC HT C CL + +T LRCP CR
Sbjct: 21 WEALASGFLSCPICLERFS----RPKILPCLHTYCQGCLETLLDGRT-----LRCPECRV 71
Query: 83 QITIPRGGVAALPPSFLVNQLLDL 106
++ +P GGVAAL +F +N LLDL
Sbjct: 72 RVPLPAGGVAALKTNFFINGLLDL 95
>gi|260782162|ref|XP_002586160.1| hypothetical protein BRAFLDRAFT_255114 [Branchiostoma floridae]
gi|229271253|gb|EEN42171.1| hypothetical protein BRAFLDRAFT_255114 [Branchiostoma floridae]
Length = 213
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 20/132 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +PR G
Sbjct: 4 LSCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPRQG 55
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + + + + + +R++ +C+ H S++L L+C+ C C+ C
Sbjct: 56 VTGLPDNIMAANMCERLQNQATLSGETREQPQSGNRCNFHPSEKLKLYCKPCQVPLCVDC 115
Query: 141 T--GGSNHSSTS 150
G H + S
Sbjct: 116 VEEGHDGHPNVS 127
>gi|260782166|ref|XP_002586162.1| hypothetical protein BRAFLDRAFT_109858 [Branchiostoma floridae]
gi|229271255|gb|EEN42173.1| hypothetical protein BRAFLDRAFT_109858 [Branchiostoma floridae]
Length = 616
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPLQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + + + + + +R++ +CS H S++L L+C+ C C+ C
Sbjct: 68 VTGLPDNIMAANMCERLQNQATLSGETRKQPQSGNRCSFHPSEKLKLYCKPCQAPLCVDC 127
Query: 141 T 141
Sbjct: 128 V 128
>gi|321471260|gb|EFX82233.1| hypothetical protein DAPPUDRAFT_316906 [Daphnia pulex]
Length = 635
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D E F+TCG CLC YD PK LPCSHTVC CL I R T+ CP CR+ I
Sbjct: 75 DVVEDFVTCGVCLCEYDEEIRKPKFLPCSHTVCFLCLQEI-----RRGDTITCPFCRKII 129
Query: 85 T 85
+
Sbjct: 130 S 130
>gi|260785666|ref|XP_002587881.1| hypothetical protein BRAFLDRAFT_87268 [Branchiostoma floridae]
gi|229273036|gb|EEN43892.1| hypothetical protein BRAFLDRAFT_87268 [Branchiostoma floridae]
Length = 714
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ + G
Sbjct: 22 LTCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLQLQG 73
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + + + + + +R++ +CS H S++L L+C+ C C+ C
Sbjct: 74 VAGLPDNIMAANMCERLQNQATLSGETRKQPQSGNRCSFHPSEKLKLYCKPCQVPLCVDC 133
Query: 141 T 141
Sbjct: 134 V 134
>gi|332255163|ref|XP_003276702.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Nomascus leucogenys]
Length = 755
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|296192347|ref|XP_002744018.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Callithrix jacchus]
Length = 755
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGHVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLV 86
>gi|390350926|ref|XP_001189258.2| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like
[Strongylocentrotus purpuratus]
Length = 371
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + LRCP+CR + +P
Sbjct: 13 LECPVCLDTFTD----PKILSCSHTYCKTCLDNLLECHGNDQ-MLRCPVCRAETQVPNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
V+ LP S + L++ M Q + S Q +++C+ C C C HS
Sbjct: 68 VSKLPASLALKSLIEDMKDQYQFCTNCESEDKPQAVVYCQDCGKYLCSTCQNA--HSQWP 125
Query: 151 GDSEHTIIPFSIAIKRMSEIL 171
G H ++P MSEIL
Sbjct: 126 GFIRHEVLP-------MSEIL 139
>gi|260808706|ref|XP_002599148.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
gi|229284424|gb|EEN55160.1| hypothetical protein BRAFLDRAFT_81815 [Branchiostoma floridae]
Length = 610
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL ++A + TL CP CR Q+ +P G
Sbjct: 16 LSCIICLELF----TRPKVLPCQHTFCQECLQQLAGKKK----TLECPTCRLQVRLPSKG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ---RRHIIP---KCSTHNSQEL-LFCETCDTVFCLQCTGG 143
V LP S +V + + + Q R P +CS H + L ++C C C+QC G
Sbjct: 68 VIGLPASCIVANMCERLKNQTEGTRDQPPSGNRCSLHPFEVLKVYCTECQVPVCVQCLEG 127
Query: 144 S--NHSSTS 150
+ +H +T+
Sbjct: 128 THDDHRTTT 136
>gi|449277291|gb|EMC85526.1| Intraflagellar transport protein 80 like protein, partial [Columba
livia]
Length = 939
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET------GTLRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSIFE----DPRVLPCSHTFCRNCLEGVIHLSSNFSIWRPLRVPLKCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ IP G+ +LP +F + +++ ++ + CS H Q L ++C + C C
Sbjct: 61 SIVEIPTSGIESLPINFALKAIIEKYQQEDPSDVATCSEHYRQPLNVYCVLDKKLVCGHC 120
Query: 141 TGGSNHS 147
H+
Sbjct: 121 LTIGKHN 127
>gi|291240839|ref|XP_002740327.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 650
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ +E LTC CL Y PK+LPC H+ C CL ++ ++ GT++CP CR++
Sbjct: 35 DKIDEDLLTCTVCLERY----KNPKILPCHHSFCEQCLVQLKGTR----GTVKCPNCRQR 86
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH 113
++ + LPPS ++N ++D++ Q RH
Sbjct: 87 HSV--NNIQQLPPSTIINSVIDIIEDQERH 114
>gi|156402828|ref|XP_001639792.1| predicted protein [Nematostella vectensis]
gi|156226922|gb|EDO47729.1| predicted protein [Nematostella vectensis]
Length = 747
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L CG C Y+ PK+LPC H+ C +CL + SQ R L CP C+ + +P G
Sbjct: 15 LVCGICQETYN----NPKVLPCLHSFCQNCLDKSIRSQER---VLVCPTCQCSVPVPAKG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKC--STHNSQELL--------------FCETCDT 134
+ A P +F +N +L +++ Q C S S L FCETCD
Sbjct: 68 IEAFPVNFFINNMLTVLAVQNPTKCTNCEDSAQASARCLDCVENLCTNCVLKYFCETCDQ 127
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSK 181
C C + +H + A+K+ + + + C K
Sbjct: 128 AICRDC-------AIYEHRDHVYVDLKEAVKKYRSSVTHMLDTCKRK 167
>gi|260785670|ref|XP_002587883.1| hypothetical protein BRAFLDRAFT_87270 [Branchiostoma floridae]
gi|229273038|gb|EEN43894.1| hypothetical protein BRAFLDRAFT_87270 [Branchiostoma floridae]
Length = 624
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL A+ + +CP CR+Q+ +PR G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDHASRKV----PFQCPNCRQQVRLPRQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + + + + + +R++ +CS H S++L L+C+ C C+ C
Sbjct: 68 VAGLPDNIMAANMCERLQNQATLSGETRKQPQSGNRCSFHPSEKLKLYCKPCQVPLCVDC 127
Query: 141 T 141
Sbjct: 128 V 128
>gi|260833184|ref|XP_002611537.1| hypothetical protein BRAFLDRAFT_63825 [Branchiostoma floridae]
gi|229296908|gb|EEN67547.1| hypothetical protein BRAFLDRAFT_63825 [Branchiostoma floridae]
Length = 3500
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E ++ F+ C C + PK+LPC HT C HCL Q + T CP CREQ
Sbjct: 3046 EKVSDDFIQCTICCYNF----KKPKVLPCLHTFCAHCLQEWV--QKNDDNTFPCPTCREQ 3099
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD 133
+ +P GV L +F + L+ ++ + + Q+ L C TCD
Sbjct: 3100 VHLPENGVEGLKDNFFLASLVKAVTEHHK-------VRHGQDGLLCTTCD 3142
>gi|260822980|ref|XP_002603961.1| hypothetical protein BRAFLDRAFT_71751 [Branchiostoma floridae]
gi|229289286|gb|EEN59972.1| hypothetical protein BRAFLDRAFT_71751 [Branchiostoma floridae]
Length = 631
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PK+LPC HT CL CL +A GTL+C +CR+Q+ +P
Sbjct: 37 LSCSICLELFT----RPKVLPCQHTFCLSPCLENLAG----RGGTLKCAVCRQQVRLPPQ 88
Query: 90 GVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
GVA LP + LV L + + +R++ +CS H S+ L ++C+ C C
Sbjct: 89 GVAGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHRSEVLKVYCKPCQIPVCKP 148
Query: 140 C 140
C
Sbjct: 149 C 149
>gi|355726070|gb|AES08754.1| tripartite motif-containing 3 [Mustela putorius furo]
Length = 162
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 21 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 73
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C H + + +C
Sbjct: 74 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEFYC 133
Query: 130 ETCDTVFCLQCTGGSN 145
E C+T C +C G +
Sbjct: 134 EACETAMCGECRAGEH 149
>gi|260806460|ref|XP_002598102.1| hypothetical protein BRAFLDRAFT_85680 [Branchiostoma floridae]
gi|229283373|gb|EEN54114.1| hypothetical protein BRAFLDRAFT_85680 [Branchiostoma floridae]
Length = 851
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
++ DF E L+C CL ++ PK+LPC H C CL + TR G +CPICR
Sbjct: 293 HHHDFKEE-LSCCICLELFT----RPKVLPCGHIFCQGCLQNL----TRSGGAFKCPICR 343
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM--------SRQRRHIIPKCSTHNSQEL-LFCETC 132
+Q+ +P GV+ LP S + + + + +R++ +CS H S+ + +FC+ C
Sbjct: 344 QQVRLPHHGVSCLPDSHNIANMCEKLRQNSSSEETREQPQSGNRCSFHPSEMIKVFCKQC 403
Query: 133 DTVFCLQC 140
C C
Sbjct: 404 QIPVCDHC 411
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 18/125 (14%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF E L+C CL ++ PK+LPC H C CL + TR G +CPICR+Q+
Sbjct: 11 DFKEE-LSCCICLELFT----RPKVLPCGHIFCQGCLQNL----TRSGGAFKCPICRQQV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLM--------SRQRRHIIPKCSTHNSQEL-LFCETCDTV 135
+P GV+ LP S + + + + +R++ +CS H S+ + +FC+ C
Sbjct: 62 RLPHHGVSCLPDSHNIANMCEKLRQNSSSEETREQPQSGNRCSFHPSEMIKVFCKQCQIP 121
Query: 136 FCLQC 140
C C
Sbjct: 122 VCDHC 126
>gi|395842830|ref|XP_003794211.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Otolemur garnettii]
Length = 756
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++ E G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QMPKTLPCLHTYCQDCLAQLV-----EGGHVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPTGVAAFKTNFFVNGLLDLVK 87
>gi|440896010|gb|ELR48052.1| Tripartite motif-containing protein 3, partial [Bos grunniens
mutus]
Length = 745
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 16 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 68
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPK-------CSTHNSQEL-LFC 129
+P GV+AL +F ++ L++ M + + H + C+ + + +C
Sbjct: 69 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAAAGRPLSCANPEGKTMEFYC 128
Query: 130 ETCDTVFCLQCTGG 143
E C+T C +C G
Sbjct: 129 EACETAMCGECRAG 142
>gi|260824846|ref|XP_002607378.1| hypothetical protein BRAFLDRAFT_69791 [Branchiostoma floridae]
gi|229292725|gb|EEN63388.1| hypothetical protein BRAFLDRAFT_69791 [Branchiostoma floridae]
Length = 651
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 20/132 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A + ++CP+CR+Q+ +P G
Sbjct: 16 LTCSICLDLFT----RPKVLPCQHTFCQECLQDHAEVRM----PIQCPVCRQQVRLPPQG 67
Query: 91 VAALPPSFLV--------NQL-LDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + + NQ+ L +R++ +CS H S+E+ L+C+ C+ C +C
Sbjct: 68 VTGLPDNLMAANMCERLQNQVTLSGETREQPQSGNRCSLHPSEEVKLYCKQCNVPVCSEC 127
Query: 141 --TGGSNHSSTS 150
G H +T
Sbjct: 128 CEEGHDGHPTTG 139
>gi|351698768|gb|EHB01687.1| Tripartite motif-containing protein 56 [Heterocephalus glaber]
Length = 739
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++A E + CP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLA-----EGSHVCCPECREA 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLV 86
>gi|260818172|ref|XP_002603958.1| hypothetical protein BRAFLDRAFT_71754 [Branchiostoma floridae]
gi|229289283|gb|EEN59969.1| hypothetical protein BRAFLDRAFT_71754 [Branchiostoma floridae]
Length = 587
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A G +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDLAG----RGGAFQCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + LV L + + +R++ +CS H S+ L ++C+ C C QC
Sbjct: 68 VKGLPDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEVLKVYCKQCQIPVCDQC 127
>gi|426357307|ref|XP_004045986.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Gorilla
gorilla gorilla]
gi|426357309|ref|XP_004045987.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Gorilla
gorilla gorilla]
Length = 755
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPDGVASFKTNFFVNGLLDLVK 87
>gi|260817088|ref|XP_002603419.1| hypothetical protein BRAFLDRAFT_80400 [Branchiostoma floridae]
gi|229288738|gb|EEN59430.1| hypothetical protein BRAFLDRAFT_80400 [Branchiostoma floridae]
Length = 637
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL + Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLEELLKKQKLKT-ELDCPSCRSKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTV-----FCLQC 140
+P GGVA L +F V L D + ++ N E L C +C+T FC +C
Sbjct: 65 LPGGGVAGLKDNFFVESLKDTVDVHKKLT-------NEGESLVCGSCETKSGAESFCTEC 117
>gi|403285819|ref|XP_003934208.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403285821|ref|XP_003934209.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 754
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----NGGHVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|397471330|ref|XP_003807249.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 1 [Pan
paniscus]
gi|397471332|ref|XP_003807250.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 isoform 2 [Pan
paniscus]
gi|410260318|gb|JAA18125.1| tripartite motif containing 56 [Pan troglodytes]
gi|410339237|gb|JAA38565.1| tripartite motif containing 56 [Pan troglodytes]
Length = 755
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLVK 87
>gi|405969566|gb|EKC34528.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 852
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
++++ S +D + FL C C +D EHTP++LPC HT C CL + +
Sbjct: 120 ILQSASRKIDDLKDDFLNCEVCKSEFDDNEHTPRVLPCLHTFCNRCLEKHVRDR-----F 174
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP-KCSTHNSQELLFCETCD 133
+ CP C+ Q +P V P L + +R+ IP + + FC+ C
Sbjct: 175 VYCPSCKTQHALPNNRVLNFPKEHTRLTLKGFVQLKRKTKIPCRDCPDSGNAGYFCKNCY 234
Query: 134 TVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
+ C C + S D H I+P
Sbjct: 235 SFMCNDCRKAHLRNFISRD--HDILPID 260
>gi|260823286|ref|XP_002604114.1| hypothetical protein BRAFLDRAFT_71598 [Branchiostoma floridae]
gi|229289439|gb|EEN60125.1| hypothetical protein BRAFLDRAFT_71598 [Branchiostoma floridae]
Length = 492
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICRE 82
E F E LTC CL ++ PK+L C HT CL CL + G L+CPI R+
Sbjct: 10 EHFREE-LTCSICLELFT----RPKVLRCGHTFCLSPCLENLVG----RGGALKCPIGRQ 60
Query: 83 QITIPRGGVAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETC 132
Q+ +P GVA LP S ++ + + + +R++ + +CS H S+ L ++C+ C
Sbjct: 61 QVRLPPQGVAGLPDSHIIANMCERLRQQTSLSGETREQPQSVNRCSFHPSEVLKVYCKQC 120
Query: 133 DTVFCLQC 140
C QC
Sbjct: 121 QIPVCEQC 128
>gi|30794216|ref|NP_112223.1| E3 ubiquitin-protein ligase TRIM56 [Homo sapiens]
gi|56749788|sp|Q9BRZ2.3|TRI56_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM56; AltName:
Full=RING finger protein 109; AltName: Full=Tripartite
motif-containing protein 56
gi|29387126|gb|AAH48194.1| Tripartite motif-containing 56 [Homo sapiens]
gi|112180307|gb|AAH05847.3| Tripartite motif-containing 56 [Homo sapiens]
gi|119570578|gb|EAW50193.1| tripartite motif-containing 56 [Homo sapiens]
gi|167773263|gb|ABZ92066.1| tripartite motif-containing 56 [synthetic construct]
Length = 755
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLVK 87
>gi|168013268|ref|XP_001759323.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689636|gb|EDQ76007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 886
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--------AASQTRET----GTLRCPIC 80
C CL +YD GEHTP++L C H+VC C++ + +Q + T G +RCP C
Sbjct: 5 CAVCLQVYDEGEHTPRVLSCGHSVCQSCVAELQLHWGAGSGEAQAQRTQGGGGLVRCPEC 64
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
++ +P GG ALP + + +L+ + R
Sbjct: 65 KQHTKVPLGGRLALPKNIELMRLIQAVPPPR 95
>gi|344245767|gb|EGW01871.1| Tripartite motif-containing protein 56 [Cricetulus griseus]
Length = 1274
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL TPK LPC HT C CL+ Q G RCP CRE
Sbjct: 270 EALSSDFLACKICLEQL----RTPKTLPCLHTYCQDCLA-----QLDNGGQARCPECRET 320
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 321 VPVPPEGVAAFKTNFFVNGLLDLVK 345
>gi|410059473|ref|XP_527840.4| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Pan troglodytes]
Length = 627
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLV 86
>gi|260822649|ref|XP_002606714.1| hypothetical protein BRAFLDRAFT_123141 [Branchiostoma floridae]
gi|229292058|gb|EEN62724.1| hypothetical protein BRAFLDRAFT_123141 [Branchiostoma floridae]
Length = 430
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 17 ETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR 76
E VS+ + + FL C C+ + PK+LPC H C CL+ AA +++
Sbjct: 6 EAVSLQTK-LTDDFLVCAICMDTF----VRPKVLPCQHRFCAACLTSYAAGRSQ----FP 56
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLM 107
CP+C++ + +P GGV ALP FLVN L++ +
Sbjct: 57 CPLCQQWVDLPWGGVDALPVDFLVNSLVEAV 87
>gi|301607377|ref|XP_002933282.1| PREDICTED: tripartite motif-containing protein 59-like [Xenopus
(Silurana) tropicalis]
Length = 397
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRETGTLR 76
N+ED LTC C ++D P++LPCSHT C +CL ++ S L+
Sbjct: 3 NFEDE----LTCSVCYNIFDD----PRILPCSHTFCRNCLEKVIHSSGSGLWRTSAAWLK 54
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTV 135
CP CR + G ALP +F + +++ + C HN Q L LFC +
Sbjct: 55 CPSCRNTSELTMSGTLALPINFALKSIVEKYKSENHFKAATCPEHNKQPLNLFCLRDRKL 114
Query: 136 FCLQCTGGSNHSSTSGDS 153
C QC H + D
Sbjct: 115 ICGQCLTVGQHQGHAIDD 132
>gi|260794800|ref|XP_002592395.1| hypothetical protein BRAFLDRAFT_67260 [Branchiostoma floridae]
gi|229277614|gb|EEN48406.1| hypothetical protein BRAFLDRAFT_67260 [Branchiostoma floridae]
Length = 602
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F E LTC CL ++ PK+LPC H C CL A+ + +CP CR+Q+
Sbjct: 12 FGEE-LTCSICLELFT----RPKVLPCQHIFCQDCLQDHASRRV----LFQCPNCRQQVR 62
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQEL-LFCETCDTV 135
IP GVA LP S +V L + + Q + +CS H S+E+ L+C+ C
Sbjct: 63 IPPQGVAGLPDSHIVANLCERLQAQATLSKETSEQTQYGNRCSFHPSEEVRLYCKQCKVP 122
Query: 136 FCLQC 140
C +C
Sbjct: 123 ICNEC 127
>gi|260822789|ref|XP_002606784.1| hypothetical protein BRAFLDRAFT_82426 [Branchiostoma floridae]
gi|229292128|gb|EEN62794.1| hypothetical protein BRAFLDRAFT_82426 [Branchiostoma floridae]
Length = 631
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--------RETGTLRCPI 79
E FL+CG C + PK LPC H+ CL CL R+ RC
Sbjct: 15 EDFLSCGICFEPFT----KPKALPCQHSFCLRCLESQHKQWLQDCRRTSHRQQQPFRCST 70
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQE-LLFCETCDTVF 136
CRE +++P GV LP + LV L + S++ + K C H ++ +LFC+ C+
Sbjct: 71 CREPVSVPSTGVKGLPDNHLVANLCEEFSKKAQVGEQKDTCGFHPTESVILFCQQCEVPV 130
Query: 137 CLQCTG 142
C C G
Sbjct: 131 CSACIG 136
>gi|260785262|ref|XP_002587681.1| hypothetical protein BRAFLDRAFT_92727 [Branchiostoma floridae]
gi|229272832|gb|EEN43692.1| hypothetical protein BRAFLDRAFT_92727 [Branchiostoma floridae]
Length = 445
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E F E L+C CL ++D PK+LPC HT C CL AA + G +CP CR +
Sbjct: 11 EQFKED-LSCSICLDLFD----RPKVLPCQHTFCHDCLIDHAARR----GIFKCPNCRLR 61
Query: 84 ITIPRGGVAALPPSFLVNQL 103
+ +PR GVA LP ++LV L
Sbjct: 62 VQLPRNGVAGLPDNYLVTSL 81
>gi|354477614|ref|XP_003501014.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56 [Cricetulus griseus]
Length = 716
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL TPK LPC HT C CL+ Q G RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RTPKTLPCLHTYCQDCLA-----QLDNGGQARCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|149641196|ref|XP_001510595.1| PREDICTED: tripartite motif-containing protein 59-like
[Ornithorhynchus anatinus]
Length = 403
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRTCLENVLQASSNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
++ IP+ G+ +LP +F + +++ ++ I C+ H+ Q L ++C + C C
Sbjct: 61 SRVEIPQSGIESLPVNFALRAIIEKYQQEDHPDIVTCAEHHGQPLNVYCLFDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H GD
Sbjct: 121 LTIGEHHGHPIGD 133
>gi|260825466|ref|XP_002607687.1| hypothetical protein BRAFLDRAFT_82867 [Branchiostoma floridae]
gi|229293036|gb|EEN63697.1| hypothetical protein BRAFLDRAFT_82867 [Branchiostoma floridae]
Length = 862
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL C CL + PK+LPC HT C CL + A Q + CP CR + +P+G
Sbjct: 31 FLECTICLEPFK----DPKVLPCLHTFCEGCLKKFVA-QDKVKNKFLCPTCRTETILPKG 85
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPK--------CSTHNSQELLFCETCDTVFCLQCT 141
GVA+ +F V L D + + + + C + + C C+ C +C
Sbjct: 86 GVASFKNNFFVQSLSDTVQTHKSLVSKEDDKLQCDVCEEDGASQ--GCVPCEEFLCDEC- 142
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN-KVCPERK 189
H H + I + + E L+ K SK+ +CP+ +
Sbjct: 143 -ACAHRRAKRTRSHEV----IGVAELKEQLITKTGSLKSKSLPICPKHE 186
>gi|260835270|ref|XP_002612632.1| hypothetical protein BRAFLDRAFT_78740 [Branchiostoma floridae]
gi|229298010|gb|EEN68641.1| hypothetical protein BRAFLDRAFT_78740 [Branchiostoma floridae]
Length = 639
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL + + +CP CR Q+++P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLRDLVGGRR----NFQCPNCRRQVSLPGPG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + LV L + + +R++ CS H +E+ LFC+ C+ C +C
Sbjct: 68 VVGLPDNHLVTNLCEALQNQATLSRETREQPRAENMCSFHPYEEIKLFCKQCNVSVCTEC 127
>gi|390355820|ref|XP_003728633.1| PREDICTED: uncharacterized protein LOC585395 [Strongylocentrotus
purpuratus]
Length = 619
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PKLL CSHT C CL R++ +Q T L CPIC++ +P+G
Sbjct: 9 LECSICLKTIN----EPKLLTCSHTFCKACLERLSDAQVNRT-VLPCPICKKTSAVPKGE 63
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHN-SQELLFCETCDTVFCLQCTGGSNHSST 149
V L + ++D M + +RH C + FC+ C T C C HS
Sbjct: 64 VGNLQTYQALKSVVDDM-KNKRHNCTSCDKEKPPAAVAFCQECGTYMCADCQ--KVHSQW 120
Query: 150 SGDSEHTII 158
S H ++
Sbjct: 121 GTFSRHQVV 129
>gi|390356333|ref|XP_003728759.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 500
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PKLL CSHT C CL R++ +Q T L CPIC++ +P+G
Sbjct: 9 LECSICLKTIN----EPKLLTCSHTFCKACLERLSDAQVNRT-VLPCPICKKTSAVPKGE 63
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHN-SQELLFCETCDTVFCLQCTGGSNHSST 149
V L + ++D M + +RH C + FC+ C T C C HS
Sbjct: 64 VGNLQTYQALKSVVDDM-KNKRHNCTSCDKEKPPAAVAFCQECGTYMCADCQ--KVHSQW 120
Query: 150 SGDSEHTII 158
S H ++
Sbjct: 121 GTFSRHQVV 129
>gi|390332992|ref|XP_003723616.1| PREDICTED: uncharacterized protein LOC100891554 [Strongylocentrotus
purpuratus]
Length = 792
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C+ PK L C HT C CL + + +G + CP+CRE T+ R G
Sbjct: 13 LVCAVCMNTL----KNPKSLSCRHTFCEECLKQCDKASQGRSGGITCPMCREVTTLSREG 68
Query: 91 VAALPPSFLVNQLLDLMSRQRRH---IIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
VA L + L+ ++L+++ + I C S +C C C C S+H+
Sbjct: 69 VAGLKSNPLIYRVLEVLEATKNSTQIICDACGDSESPLTTYCRDCLHFICDSC--ASSHA 126
Query: 148 STS-GDSEHTIIPF------SIAIKRMSEILLYKANEC 178
+H +P +I IK M E L KA+EC
Sbjct: 127 KMKLLMKDHRTVPLDKIENGTIQIKWMEEGLWRKAHEC 164
>gi|321471406|gb|EFX82379.1| hypothetical protein DAPPUDRAFT_316830 [Daphnia pulex]
Length = 195
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC CL YD G PK LPCSHT+CL C + R+ T+ CP CR++ +
Sbjct: 10 EDLVTCNICLYEYDEGIRKPKFLPCSHTICLECFQSV-----RQGNTITCPFCRKRTSKD 64
Query: 88 RGGVAA--LPPSFLVNQLLDL 106
G A LP + V +LL L
Sbjct: 65 NGDEAEWTLPTNQYVLELLKL 85
>gi|260825468|ref|XP_002607688.1| hypothetical protein BRAFLDRAFT_123268 [Branchiostoma floridae]
gi|229293037|gb|EEN63698.1| hypothetical protein BRAFLDRAFT_123268 [Branchiostoma floridae]
Length = 671
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
+FL C CL + PK+LPC HT C CL ++ Q T +CP CR ++P
Sbjct: 18 AFLECTICLEPF----KDPKVLPCLHTFCEGCLKKLVEQQDDAKDTFQCPTCRTDTSLPV 73
Query: 89 GGVAALPPSFLVNQLLD-------LMSRQRRHIIPKCSTHNSQELLF---CETCDTVFCL 138
GGVA L +F V L D L+S++ + KC N +E + C C+ C
Sbjct: 74 GGVAFLKNNFFVQSLSDTVQTHKSLVSKEDDKV--KCD--NCEEEVANHGCVPCEEFLCD 129
Query: 139 QC 140
+C
Sbjct: 130 EC 131
>gi|405969109|gb|EKC34115.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 513
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGTLRCPICREQITIPRGGV 91
C C + E PKLLPC HT C CL IA++ T RCPICR+ +IP+ GV
Sbjct: 9 CPICTHEFSTPEKVPKLLPCYHTFCSPCLDNMIASTPLNSDSTFRCPICRQGASIPKNGV 68
Query: 92 AALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQC 140
++ + Q+ C ++ +L +C+ C+++ C C
Sbjct: 69 QGFFDNYF------RCAPQKEKTCDICGAGDNYQLDYCKECNSLLCDSC 111
>gi|443708151|gb|ELU03406.1| hypothetical protein CAPTEDRAFT_168454 [Capitella teleta]
Length = 738
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 31/159 (19%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL+C CL Y PK+LPC HT C CL Q+ ++ CPICR+Q +P
Sbjct: 15 FLSCAICLERYS----RPKVLPCLHTFCEQCLQEYIPPQSL---SVACPICRQQSILPEA 67
Query: 90 GVAALPPSFLVNQLLDLMSRQR------RHIIPKCST----------HNSQEL-LFCETC 132
GV+AL + + +L++++ + +C T H Q +C C
Sbjct: 68 GVSALQNNCFIIKLMEVLENPNLCLNLSELAMAECDTATMASLVCPNHQGQSFEFYCSEC 127
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
+T C CT G H+S H + + AI+ E+L
Sbjct: 128 ETAVCRDCTSGE-HTS------HRTLLLTEAIEEHREML 159
>gi|260818719|ref|XP_002604530.1| hypothetical protein BRAFLDRAFT_79377 [Branchiostoma floridae]
gi|229289857|gb|EEN60541.1| hypothetical protein BRAFLDRAFT_79377 [Branchiostoma floridae]
Length = 595
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL + + +CP CR Q+++P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLRDLVGGRR----NFQCPNCRRQVSLPGRG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V LP + LV L + + +Q + CS H ++E+ L+C+ C+ C +C
Sbjct: 68 VFGLPDNHLVTNLCEALQKQATLSGETGEQPQSGNGCSFHPAEEVRLYCKQCNVPVCNEC 127
Query: 141 TGG--SNHSSTS 150
SNH++ S
Sbjct: 128 LDERHSNHATIS 139
>gi|321471258|gb|EFX82231.1| hypothetical protein DAPPUDRAFT_302639 [Daphnia pulex]
Length = 545
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
Y + ESF+TC CLC +D PK LPC+HT+CL CL I + + CP+CR+
Sbjct: 8 YSEETESFVTCSICLCEFDAETRKPKFLPCAHTLCLKCLKEI-----HKEFVISCPLCRK 62
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSR 109
+ + + V++LP + +L L +
Sbjct: 63 EFSY-QDDVSSLPNNSYALHMLKLSEK 88
>gi|260820602|ref|XP_002605623.1| hypothetical protein BRAFLDRAFT_232738 [Branchiostoma floridae]
gi|229290958|gb|EEN61633.1| hypothetical protein BRAFLDRAFT_232738 [Branchiostoma floridae]
Length = 97
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 16 VETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL 75
V+ S D + FL C CL + PK+LPC HT C CL R+ A T G L
Sbjct: 8 VKMASDATSDITDKFLVCQVCLEDF----KQPKMLPCLHTFCQPCLERLLA--TEPVGKL 61
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ 110
CP C++ + +P+ GV L + LV +L +++ +Q
Sbjct: 62 DCPTCQQDVPLPKNGVRVLKSNLLVGKLCEILQQQ 96
>gi|380791681|gb|AFE67716.1| E3 ubiquitin-protein ligase TRIM56, partial [Macaca mulatta]
Length = 741
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|109066171|ref|XP_001107405.1| PREDICTED: tripartite motif-containing protein 56-like [Macaca
mulatta]
Length = 755
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|355747550|gb|EHH52047.1| hypothetical protein EGM_12415 [Macaca fascicularis]
Length = 755
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|383412319|gb|AFH29373.1| E3 ubiquitin-protein ligase TRIM56 [Macaca mulatta]
Length = 755
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|355560524|gb|EHH17210.1| hypothetical protein EGK_13552 [Macaca mulatta]
gi|384939930|gb|AFI33570.1| E3 ubiquitin-protein ligase TRIM56 [Macaca mulatta]
Length = 755
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|321471263|gb|EFX82236.1| hypothetical protein DAPPUDRAFT_302641 [Daphnia pulex]
Length = 511
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F TCG CL YD PK LPC HTVCL C+ ++ SQ++ ++ CP CR T P
Sbjct: 8 EDFATCGVCLYEYDEEIRKPKFLPCFHTVCLECIRKL-LSQSQGKKSITCPFCRNISTDP 66
Query: 88 RGGVAA---LPPSFLVNQLLDLMSRQRRHI 114
R + LP + N L ++ +Q+R I
Sbjct: 67 RKDIKEKWILPNN---NHALHII-KQKRQI 92
>gi|260820335|ref|XP_002605490.1| hypothetical protein BRAFLDRAFT_126800 [Branchiostoma floridae]
gi|229290824|gb|EEN61500.1| hypothetical protein BRAFLDRAFT_126800 [Branchiostoma floridae]
Length = 728
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ E L+C C PK LPC HT C CL +A + + G +CP C +
Sbjct: 9 EEIQEDILSCPICYHQLT----EPKALPCQHTYCCKCLQELA--RRAKNGQFQCPECGKT 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD 133
+ IP GGV A P +FLV +LD + +C ++ + CD
Sbjct: 63 VAIPTGGVEAFPTNFLVANVLDK--------VQQCKEEKKKQADETDMCD 104
>gi|260833174|ref|XP_002611532.1| hypothetical protein BRAFLDRAFT_63831 [Branchiostoma floridae]
gi|229296903|gb|EEN67542.1| hypothetical protein BRAFLDRAFT_63831 [Branchiostoma floridae]
Length = 272
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E ++ F+ C +C Y+ + PK+LPC HT C HCL Q + T CP CREQ
Sbjct: 8 EKVSDDFIQCT--ICCYNFKK--PKVLPCLHTFCAHCLQEWV--QKNDGNTFPCPTCREQ 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD 133
+ +P GV L +F + L+ ++ + + Q+ L C TCD
Sbjct: 62 VHLPENGVEGLKDNFFLASLVKAVTEHHK-------VRHGQDGLLCTTCD 104
>gi|33877724|gb|AAH11882.1| TRIM56 protein, partial [Homo sapiens]
Length = 379
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 83 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 133
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVA+ +F VN LLDL+
Sbjct: 134 VPVPPEGVASFKTNFFVNGLLDLVK 158
>gi|260810018|ref|XP_002599801.1| hypothetical protein BRAFLDRAFT_261406 [Branchiostoma floridae]
gi|229285083|gb|EEN55813.1| hypothetical protein BRAFLDRAFT_261406 [Branchiostoma floridae]
Length = 187
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 42 GGEHTPKLLPCSHTVCLHCLSRI-AASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
GG PK+LPC HT C CL ++ A T G L CP CR+ +P+ GV AL +FLV
Sbjct: 3 GGLRRPKILPCLHTFCQGCLEKLPVAKSTDGPGKLSCPTCRQDAALPKDGVRALKDNFLV 62
Query: 101 NQLLDLMSRQRRHIIPKCSTHNSQELLF---CETCD-----TVFCLQC 140
+L D+M + ++ ++QE + C TC+ T +C+ C
Sbjct: 63 TKLSDVMKQ---------TSDSAQEGMGEARCSTCEAGVHATSYCVDC 101
>gi|260794814|ref|XP_002592402.1| hypothetical protein BRAFLDRAFT_67267 [Branchiostoma floridae]
gi|229277621|gb|EEN48413.1| hypothetical protein BRAFLDRAFT_67267 [Branchiostoma floridae]
Length = 639
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL + PK+LPC HT C CL A+ + +CP CR+Q+ +P G
Sbjct: 16 LSCSICLELVT----RPKVLPCQHTFCQDCLQDHASRRV----PFQCPNCRQQVRLPPRG 67
Query: 91 VAALPPSFLVNQLLD-------LMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP S L L + L +R++ +CS H S+++ L+C+ C C +C
Sbjct: 68 VAGLPDSHLATSLCERLQNQATLSTREQSQYGNRCSFHPSEDVRLYCKQCKVPICHEC 125
>gi|353231497|emb|CCD77915.1| putative trim56 protein [Schistosoma mansoni]
Length = 725
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT----LRCP 78
++ ++ FL C C Y PK L C HT C C+ + I+A T T CP
Sbjct: 68 QEIHDEFLVCKICFDSYTN----PKCLACLHTFCAKCIEKHISAEVTYNKYTDYRDFTCP 123
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+CR++ +P GGV LP +FL++ L DL+ RQR
Sbjct: 124 LCRKRTQLPLGGVKRLPDNFLISGLTDLVLRQR 156
>gi|402912301|ref|XP_003919580.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM56,
partial [Papio anubis]
Length = 552
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL ++A + +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----QAPKTLPCLHTYCQDCLGQLA-----DGSRIRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS 108
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPPEGVAAFKTNFFVNGLLDLVK 87
>gi|260818777|ref|XP_002604559.1| hypothetical protein BRAFLDRAFT_79421 [Branchiostoma floridae]
gi|229289886|gb|EEN60570.1| hypothetical protein BRAFLDRAFT_79421 [Branchiostoma floridae]
Length = 1246
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL +A L+CP CR+ + + R G
Sbjct: 481 LSCSICLELFT----RPKVLPCQHTFCQDCLQDLAGKNKH----LKCPNCRKHVWLSRKG 532
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA + LV L + + +R++ +CS H S+ L ++C+ C C C
Sbjct: 533 VAGFRDNHLVTSLCERLQNQATVSGETREQPQFGNRCSFHPSEVLKVYCKQCQIPVCDHC 592
>gi|260820337|ref|XP_002605491.1| hypothetical protein BRAFLDRAFT_92912 [Branchiostoma floridae]
gi|229290825|gb|EEN61501.1| hypothetical protein BRAFLDRAFT_92912 [Branchiostoma floridae]
Length = 603
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E L+C +C + E PK LPC HT C CL +A R CP CR+
Sbjct: 8 QEIQEDVLSCP--ICNHQLTE--PKALPCQHTYCCKCLQELAKRTDRRR--FPCPECRKM 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM------SRQRRHIIPKCSTHNSQELLFCETCDTVFC 137
++IP GV A P +FLV +L+ + +++ + C H + + C TC+ + C
Sbjct: 62 VSIPSQGVEAFPTNFLVANVLEKVQHHKEEKKKQADEMDMCIFHKQEAQVVCITCNFIVC 121
Query: 138 LQC--TGGSNHSSTSGDSEHTI 157
C G H D E
Sbjct: 122 SDCLKAGHKEHVLKHIDQEKAF 143
>gi|449689363|ref|XP_002155572.2| PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Hydra
magnipapillata]
Length = 753
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL +D PKLL C H+ C CL +I + + + CP CRE IP G
Sbjct: 17 LVCAICLERFD----DPKLLNCLHSFCCQCLHKII--NQKPSDVIECPTCREVTKIPING 70
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCT 141
+ L +F +N LLDL+ +++ +C H++ C CD V C C
Sbjct: 71 LKELKTNFFINSLLDLVHHKIEELKNEKKKGEQCEQCQEHDNATSR-CIECDLVLCGGCI 129
Query: 142 GGSNHSSTSGDSEHTII 158
++H +H I+
Sbjct: 130 --ADHRRNRSTLDHRIV 144
>gi|256078016|ref|XP_002575294.1| trim56 protein [Schistosoma mansoni]
Length = 686
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT----LRCP 78
++ ++ FL C C Y PK L C HT C C+ + I+A T T CP
Sbjct: 68 QEIHDEFLVCKICFDSYTN----PKCLACLHTFCAKCIEKHISAEVTYNKYTDYRDFTCP 123
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+CR++ +P GGV LP +FL++ L DL+ RQR
Sbjct: 124 LCRKRTQLPLGGVKRLPDNFLISGLTDLVLRQR 156
>gi|321471259|gb|EFX82232.1| hypothetical protein DAPPUDRAFT_302663 [Daphnia pulex]
Length = 336
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCS--HTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E F+TCG CLC +D PK L CS HTVCL CL +I + T+ CP CRE +
Sbjct: 8 EDFITCGVCLCEFDDINRIPKFLQCSARHTVCLLCLRKII-----KNATVSCPFCRENFS 62
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
+ VA LP + V +L ++ I K
Sbjct: 63 L--ADVARLPSNGYVLHMLKFGKQKGNKPIDK 92
>gi|291233511|ref|XP_002736696.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 1052
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ +E FL+C CL +Y+ PK+LPC HT C CL A + G L+C CR Q
Sbjct: 364 EISEDFLSCSICLEIYN----NPKVLPCLHTFCQQCLVTFKA---KSGGILKCATCRIQC 416
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD----TVFCLQC 140
P + L +F ++ LLD RQR +++ CE C T C+ C
Sbjct: 417 NTP---IQELKSNFFLSSLLDTYQRQR--------NLSTEHPPVCEICQEKTATHRCVDC 465
Query: 141 TGGSNH 146
S H
Sbjct: 466 PQFSCH 471
>gi|260815627|ref|XP_002602574.1| hypothetical protein BRAFLDRAFT_81834 [Branchiostoma floridae]
gi|229287885|gb|EEN58586.1| hypothetical protein BRAFLDRAFT_81834 [Branchiostoma floridae]
Length = 606
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 29/149 (19%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A R CP CR Q+ + R
Sbjct: 17 LTCSICLELFT----RPKVLPCQHTFCQGCLQHHAGGGVR----FMCPNCRRQVRLQRQE 68
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V +LP + + L + + +R++ +C +H +E+ LFC+ CD C +C
Sbjct: 69 VKSLPDNLIAASLCERLQYQNTPSGDAREQPQDRDRCQSHPHEEVQLFCKQCDEPVCNEC 128
Query: 141 TGGSNHSSTSGDSEHTIIPFSIAIKRMSE 169
G S+H +I++KR S+
Sbjct: 129 L-------DEGHSDHV----TISLKRASQ 146
>gi|260825464|ref|XP_002607686.1| hypothetical protein BRAFLDRAFT_82868 [Branchiostoma floridae]
gi|229293035|gb|EEN63696.1| hypothetical protein BRAFLDRAFT_82868 [Branchiostoma floridae]
Length = 867
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 22/169 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL C CL + PK+LPC HT C CL + A Q + +CP CR +P+G
Sbjct: 32 FLECTICLEPFK----DPKVLPCLHTFCEGCLKKFIA-QDKVKNKFQCPTCRTDTVLPKG 86
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPK--------CSTHNSQELLFCETCDTVFCLQCT 141
GV+ L +F V L D + + + + C + + C C+ C +C
Sbjct: 87 GVSKLKNNFFVQSLSDTIETHKSLVSKEDDKVQCDVCEEDGASQ--GCVVCEEFLCDECA 144
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN-KVCPERK 189
+ + + E I + + E L+ K S + CP+ +
Sbjct: 145 CAHHRAKRTRSHE------VIGVAELKERLITKTGSLKSNSLPTCPKHR 187
>gi|260804475|ref|XP_002597113.1| hypothetical protein BRAFLDRAFT_215738 [Branchiostoma floridae]
gi|229282376|gb|EEN53125.1| hypothetical protein BRAFLDRAFT_215738 [Branchiostoma floridae]
Length = 88
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 8 ELTDEFLVCQICLEDF----KQPKVLPCLHTFCRPCLEKLLA--TEPVGKLNCPTCRQDV 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ 110
+P GV L +FLV +L D++ +
Sbjct: 62 PLPENGVKGLKSNFLVGKLHDILQEE 87
>gi|327290340|ref|XP_003229881.1| PREDICTED: e3 ubiquitin-protein ligase TRIM56-like, partial [Anolis
carolinensis]
Length = 737
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-------- 74
+E FL+C CL + PK+LPC HT C CL + +T E
Sbjct: 54 WEALASGFLSCPICLERFS----QPKILPCLHTYCQGCLETLLDGRTEEEDAEEEEIEAE 109
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
LRCP CR + +P GGVAAL +F +N LLDL
Sbjct: 110 AQELRCPECRTWVPLPAGGVAALKTNFFINGLLDL 144
>gi|260825454|ref|XP_002607681.1| hypothetical protein BRAFLDRAFT_123270 [Branchiostoma floridae]
gi|229293030|gb|EEN63691.1| hypothetical protein BRAFLDRAFT_123270 [Branchiostoma floridae]
Length = 616
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ FL+C CL + H PK LPC HT C CL A + +CP CR +
Sbjct: 14 DEFLSCSICLEPF----HQPKTLPCLHTFCEECLRDHAEVRP----GFQCPTCRRHAVLG 65
Query: 88 RGGVAALPPSFLVNQLL-DLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
GVA LP + ++ L ++ + +C H+ +EL LFC C+ V C +C
Sbjct: 66 PDGVAGLPDNHFISSLCHTVLEQGTAEYESQCGAHSPEELKLFCADCEAVICSEC 120
>gi|260792768|ref|XP_002591386.1| hypothetical protein BRAFLDRAFT_86893 [Branchiostoma floridae]
gi|229276591|gb|EEN47397.1| hypothetical protein BRAFLDRAFT_86893 [Branchiostoma floridae]
Length = 611
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 19/127 (14%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E F+E LTC CL ++ PK+LPC HT+C CL + ++ RCP CR Q
Sbjct: 10 ELFHEE-LTCSICLELFT----RPKVLPCQHTLCEDCLQDLMIAKKYR----RCPNCRRQ 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQEL-LFCETCD 133
+ +P GVA LP + + + + + Q + +CS H S+E+ L+C+ C
Sbjct: 61 VRLPGKGVAGLPDNLMAANMCEGLRNQATLSGETTEQPQSGNRCSFHPSEEVTLYCKQCS 120
Query: 134 TVFCLQC 140
C +C
Sbjct: 121 VPVCNEC 127
>gi|358341002|dbj|GAA37251.2| E3 ubiquitin-protein ligase TRIM56, partial [Clonorchis sinensis]
Length = 387
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGT----LRCP 78
++ ++ FL C CL Y+ PK L C HT C C+ + I+A T T CP
Sbjct: 68 QEIHDEFLVCKICLESYN----NPKCLSCLHTFCAACIDKHISAEVTYNKYTDYRDFTCP 123
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+CR++ +P GGV LP +FL++ L +L+ RQR
Sbjct: 124 LCRKRTQLPLGGVKRLPDNFLISGLTELVMRQR 156
>gi|390345918|ref|XP_001197514.2| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + LRCP+CR + +P
Sbjct: 13 LECPVCLNTFTD----PKILSCSHTYCKTCLDNLLECHGNDQ-MLRCPVCRAETQVPNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
V+ LP + + L+D + Q + S Q +++C+ C FC+ T + HS
Sbjct: 68 VSKLPANLALKSLIDDVKNQYQFCTNCESEDKPQAVVYCQDCGMYFCI--TSHNKHSQWK 125
Query: 151 GDSEHTIIPFS 161
H + S
Sbjct: 126 NFLGHEVFAMS 136
>gi|291243269|ref|XP_002741525.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 273
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +E FL CG C Y PKLLPC H+ C CL ++ A ++ + + CP+CR +
Sbjct: 12 EEIDEDFLNCGICSDRY----TKPKLLPCQHSFCEECLVKVVA-KSGQPDVVVCPLCRRK 66
Query: 84 ITIPRGGVAALPPSFLVNQLLD 105
IP GG++ + + +NQL++
Sbjct: 67 HDIP-GGISKIEDNLFINQLVE 87
>gi|260827945|ref|XP_002608924.1| hypothetical protein BRAFLDRAFT_85511 [Branchiostoma floridae]
gi|229294278|gb|EEN64934.1| hypothetical protein BRAFLDRAFT_85511 [Branchiostoma floridae]
Length = 1459
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+E FL C C Y PKLLPC H C CL R A ++ + CP C ++ +
Sbjct: 817 SEDFLICQICFEEYS----KPKLLPCLHFFCERCLVRYVADRSHK---FECPTCGQETCL 869
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------CSTHNSQELLFCETCDTVFCLQC 140
GVA L +F ++ L D +S QR + K CS +++ C C C C
Sbjct: 870 TERGVARLKDNFFISNLCDTLSMQRGRVKEKKVSCAICSDEDAEATSRCLECADFLCPDC 929
>gi|327266926|ref|XP_003218254.1| PREDICTED: tripartite motif-containing protein 59-like [Anolis
carolinensis]
Length = 406
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCL-SRIAASQTRETGT-----LRCPICR 81
E LTC C ++D P++LPCSHT C +CL S + S T L+CP CR
Sbjct: 5 EEELTCSICYSIFDD----PRVLPCSHTFCRNCLESVLQLSSTFSIWRPLRLPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ IP G +LP ++ + +++ R+ + C+ H Q L ++C + C QC
Sbjct: 61 SIVEIPPSGTDSLPVNYALKAIIEKYQREDHPDVATCNEHYRQPLNVYCLLDRKLVCGQC 120
Query: 141 TGGSNH 146
NH
Sbjct: 121 LTIGNH 126
>gi|390362239|ref|XP_003730105.1| PREDICTED: tripartite motif-containing protein 4-like
[Strongylocentrotus purpuratus]
Length = 330
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + L+CP+CR + +P
Sbjct: 13 LECPVCLDTFTD----PKILSCSHTYCKTCLDNLLECHGNDQ-MLQCPVCRAETQVPNRD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNS-QELLFCETCDTVFCLQCTGGSNHSST 149
V+ LP S + L++ + + R C + + Q +++C+ C C C +NHS
Sbjct: 68 VSKLPASLALKSLIEDV-KNHRQFCSNCKSEDKLQAVVYCQDCGKYLCFTC--HNNHSQW 124
Query: 150 SGDSEHTIIPF 160
H ++P
Sbjct: 125 QDFISHEVLPM 135
>gi|156373711|ref|XP_001629454.1| predicted protein [Nematostella vectensis]
gi|156216455|gb|EDO37391.1| predicted protein [Nematostella vectensis]
Length = 163
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 30/170 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E + C CL +D P++LPC H+ C C++ +A ++ G + CP CR + +P
Sbjct: 2 EYIIKCPVCLETFD----DPRVLPCQHSFCKKCVTGVAKAR---RGLVVCPQCRRESWLP 54
Query: 88 RGGVAALPPSFLVNQLL----------DLM--SRQRRHIIPKCSTHNSQELLF-CETCDT 134
R GV P + + + D+M + R KC TH ++L + C+ C
Sbjct: 55 RKGVKGYPSNIFIKNVRRRHHVLVLPGDVMHDNADREKYYRKCRTHPEEDLKYHCDKCQC 114
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR---MSEILLYKANECVSK 181
C CT + H + P A+K + + L+ +A C SK
Sbjct: 115 KVCWDCT-------VLAHTGHNVQPLDDAVKEYCGLVKSLVSEARGCYSK 157
>gi|355726021|gb|AES08738.1| tripartite motif protein TRIM2 [Mustela putorius furo]
Length = 133
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 31 QIDKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTS 83
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 84 ILPEKGVAALQNNFFITNLMDVLQR 108
>gi|321471278|gb|EFX82251.1| hypothetical protein DAPPUDRAFT_316927 [Daphnia pulex]
Length = 533
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 17/125 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ F+ C C C YD PK LPCSHTVC+ CL I G+ CP C +
Sbjct: 11 DDFVNCDVCWCEYDANCRKPKFLPCSHTVCILCLREIY-----RDGSFTCPTCCQTF--- 62
Query: 88 RGGVAALPPSFLVN----QLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGG 143
P S N QLL R+ + ++ + + +EL +C C+++ CT
Sbjct: 63 ----GQEPDSLSTNEYALQLLMFKKRKNQRVMDSSLSDSGRELRWCTECESLATSSCT-S 117
Query: 144 SNHSS 148
S HS+
Sbjct: 118 SQHST 122
>gi|260792766|ref|XP_002591385.1| hypothetical protein BRAFLDRAFT_86892 [Branchiostoma floridae]
gi|229276590|gb|EEN47396.1| hypothetical protein BRAFLDRAFT_86892 [Branchiostoma floridae]
Length = 639
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC HT C CL A + G +CP CR + +P G
Sbjct: 16 LSCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----KGGAFQCPNCRLKFKLPPQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + LV L + + +R++ CS H S+E+ L+C+ C+ C +C
Sbjct: 68 VAGLPNNHLVTSLCERLQNQASLSGETREQPQSGNWCSFHPSEEVKLYCKQCNVPVCNEC 127
>gi|260825462|ref|XP_002607685.1| hypothetical protein BRAFLDRAFT_82869 [Branchiostoma floridae]
gi|229293034|gb|EEN63695.1| hypothetical protein BRAFLDRAFT_82869 [Branchiostoma floridae]
Length = 728
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL + PK+LPC HT C CL + A Q + +CP CR + +P+
Sbjct: 31 DFLECTICLEPF----KDPKVLPCLHTFCEGCLKKFIA-QDKVKNKFQCPTCRTETVLPK 85
Query: 89 GGVAALPPSFLVNQLLDLMSRQRRHIIP---KCSTHNSQEL---LFCETCDTVFCLQCTG 142
GGV+ L +F V L D + + + K N +E C C+ C +C
Sbjct: 86 GGVSKLKNNFFVQSLSDTIDTHKSLVSKEDGKVQCDNCEEDGASQGCVVCEEFLCDECAC 145
Query: 143 G 143
G
Sbjct: 146 G 146
>gi|260782498|ref|XP_002586323.1| hypothetical protein BRAFLDRAFT_108978 [Branchiostoma floridae]
gi|229271426|gb|EEN42334.1| hypothetical protein BRAFLDRAFT_108978 [Branchiostoma floridae]
Length = 619
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 10 STNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT 69
+ S+L ET+ + +TC CL + + PK+LPC HT C +CL A +
Sbjct: 3 AAQSSLGETIKDD--------VTCSICLELIN----RPKMLPCQHTFCQNCLQEFAGREV 50
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQR-----RHIIP--KCSTHN 122
T CP CR + +P GV LP + L+ L + + +Q R +CS H
Sbjct: 51 ----TFECPYCRLPVNLPSEGVEGLPGNLLITSLCERLKKQELSKETREEFEGNRCSFHP 106
Query: 123 SQEL-LFCETCDTVFCLQC 140
S EL L+C+ C C C
Sbjct: 107 SLELQLYCKPCHLPVCELC 125
>gi|26338478|dbj|BAC32910.1| unnamed protein product [Mus musculus]
Length = 155
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+
Sbjct: 33 IDKQFLICSICLERY----KNPKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSI 85
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GVAAL +F + L+D++ R
Sbjct: 86 LPEKGVAALQNNFFITNLMDVLQR 109
>gi|410904543|ref|XP_003965751.1| PREDICTED: RING finger protein 183-like [Takifugu rubripes]
Length = 324
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
C C C YD TPKLL C HT CL CL+RI + E TL CPICRE +P G
Sbjct: 112 CAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSA-ELKTLSCPICRELTKLPHG 167
>gi|321471265|gb|EFX82238.1| hypothetical protein DAPPUDRAFT_316914 [Daphnia pulex]
Length = 399
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F+TCG C +D + PK LPC+HTVCL CL + R+ + CP CRE I
Sbjct: 8 EDFVTCGVCFYQFDDFDRKPKFLPCAHTVCLSCLKEM-----RKGHLITCPFCREMIL-- 60
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
V LP + +L ++ + E+ +C TC++ CT S HS
Sbjct: 61 SLDVTGLPNNPYALHMLKFKEKKESK-----NVFTLLEVSWCSTCESAEKPGCT-PSGHS 114
Query: 148 STS 150
S +
Sbjct: 115 SVN 117
>gi|260792760|ref|XP_002591382.1| hypothetical protein BRAFLDRAFT_86889 [Branchiostoma floridae]
gi|229276587|gb|EEN47393.1| hypothetical protein BRAFLDRAFT_86889 [Branchiostoma floridae]
Length = 888
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL ++ PK+LPC HT C CL A + L+CP CR+Q+ +P G
Sbjct: 16 LACSICLELFT----RPKVLPCQHTFCRDCLQDHAGKKKH----LKCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA L + LV L + + +R++ +CS H S+++ ++C+ C+ C +C
Sbjct: 68 VAGLQDNHLVTSLCERLQNQATLSGETREQPQSGNRCSFHPSEDVKVYCKQCNVPVCNEC 127
>gi|260836014|ref|XP_002613002.1| hypothetical protein BRAFLDRAFT_74791 [Branchiostoma floridae]
gi|229298384|gb|EEN69011.1| hypothetical protein BRAFLDRAFT_74791 [Branchiostoma floridae]
Length = 182
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 26/150 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLP-CSHTVCLHCLSRIAASQTRETG-----TLRCPICR 81
+ LTCG CL +D PK LP C H C+ CL++ A++ R G T CP CR
Sbjct: 14 DDLLTCGICLETFDSKLKKPKSLPSCRHIFCMECLTKHVATEQRRRGQGGWTTFECPTCR 73
Query: 82 EQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRH---------IIPKCSTHNS 123
+++ + GV LP V L D L +R + ++ KC H
Sbjct: 74 KKVNLSPKGVEGLPDDRTVLGLTDKVLNKGAVKLTTRGDENYSKDGITAQVVDKCPKHPR 133
Query: 124 QEL-LFCETCDTVFCLQCTGGSNHS-STSG 151
+ L +FC C C +C + STSG
Sbjct: 134 ENLRMFCNRCAMPVCAECVENEHDGHSTSG 163
>gi|348527598|ref|XP_003451306.1| PREDICTED: RING finger protein 183-like [Oreochromis niloticus]
Length = 320
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
C C C YD TPKLL C HT CL CL+RI + + E TL CP+CRE +P G
Sbjct: 109 CAVCFCTYDNVFKTPKLLACGHTFCLECLARINVT-SPELKTLSCPVCREVTELPHG 164
>gi|260814125|ref|XP_002601766.1| hypothetical protein BRAFLDRAFT_76014 [Branchiostoma floridae]
gi|229287068|gb|EEN57778.1| hypothetical protein BRAFLDRAFT_76014 [Branchiostoma floridae]
Length = 257
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRETGTLRCPICR 81
E+ E FL C CL YD PK LPC+H C CL + +A + R L CP CR
Sbjct: 7 EEITERFLVCSVCLEEYD----EPKKLPCTHCFCRKCLENVLDSAKEGRRRTRLSCPSCR 62
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQ-------RRHIIPKCSTHNSQELLFCETCDT 134
++ +P GV L S + +L ++S + R C + +C+ C+
Sbjct: 63 QEARLPGRGVRDLEDSHFLRKLQKVVSTRTAMLGDADRACCGLCQCKEATATAYCKGCEH 122
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C C+ ++ + SEH ++ S
Sbjct: 123 YLCKDCS-HTHRVISDAASEHELLQVS 148
>gi|156361058|ref|XP_001625338.1| predicted protein [Nematostella vectensis]
gi|156212166|gb|EDO33238.1| predicted protein [Nematostella vectensis]
Length = 282
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQI 84
E +TC C+ EH P++LPC H+ C HCL +A S+ R G L CP+C+ +
Sbjct: 10 EDEVTCSICI------EHLNDPRVLPCLHSFCRHCLEELAVHSEGR--GKLVCPLCKAEF 61
Query: 85 TIPRGGVAALPPSFLVNQLLD---LMSRQRRHIIPKCSTHNSQE--LLFCETCDTVFCLQ 139
I V +L +F++N +L L++ + P C + +S E C CD C Q
Sbjct: 62 QISPADVPSLKVNFMINSILSVLPLLTSEDSKKKPACESCDSGEPAQGRCNECDHFVCEQ 121
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
C S H HTI+ F IK + + KA+ C
Sbjct: 122 CI--SAHKRFRPVQHHTILSFD-EIKSGKLLAMSKASFC 157
>gi|291226103|ref|XP_002733038.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 675
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S + E +E FL C CL + PK+LPC H+ C CL I+ S T+ CP+
Sbjct: 5 SFSREQLDERFLQCPICLDRF----RKPKILPCFHSFCRECLVSISKSGK---NTVTCPL 57
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL---FCETCDTVF 136
R +P G+ LP S+ +N L+D + I T Q + CE V+
Sbjct: 58 DRRLHKLPPNGINGLPDSYFLNDLMDFIDWGGEDAI----TEERQGKMCEGGCERGARVY 113
Query: 137 CLQC 140
C++C
Sbjct: 114 CVEC 117
>gi|156360555|ref|XP_001625093.1| predicted protein [Nematostella vectensis]
gi|156211908|gb|EDO32993.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLD--LMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTGG 143
V +L +F++N ++ L++ + P C + +S E C CD C QC
Sbjct: 64 PADVPSLKVNFMINSIISVLLLTSEDSKKKPACESCDSGEPAQGRCNECDHFVCEQCI-- 121
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
S H HTI+ F IK + + KA+ C
Sbjct: 122 STHKRFRPVQHHTILSFD-EIKSGKLLAMSKASFC 155
>gi|321471271|gb|EFX82244.1| hypothetical protein DAPPUDRAFT_302646 [Daphnia pulex]
Length = 536
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
+D N+ F+TCG CL YD PK LPCSHT+CL CL + T ++ CP CR
Sbjct: 5 DDDNDDFVTCGVCLWEYDEEIRKPKFLPCSHTICLLCLQGLVQGTT--IKSITCPFCR 60
>gi|115707256|ref|XP_787393.2| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 695
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
M+++LS S L + +E FL C C + PK+LPC H+ C CL R
Sbjct: 1 MAASLSQLSVLSQ--------ISEEFLLCQVCFERFS----KPKVLPCLHSFCEACLLRY 48
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMS------RQRRHIIPKC 118
A + T+RCP+CR++ +P GV+ L +F + L D+ + +R+ + C
Sbjct: 49 APDGSH---TIRCPLCRQESELPENGVSGLADNFFILNLSDVFTPRKDEGPRRKAVCTIC 105
Query: 119 STHNSQELLF-CETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
E + C C C +C +H +H II
Sbjct: 106 VGQQPAEAHYRCLECVDFLCDECAPSHDHRIARFTRKHHII 146
>gi|440898577|gb|ELR50042.1| Intraflagellar transport protein 80-like protein [Bos grunniens
mutus]
Length = 948
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFE----DPRVLPCSHTFCRNCLENV----LQATGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCE 130
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCL 110
Query: 131 TCDTVFCLQC-TGGSNH 146
+ C C T G +H
Sbjct: 111 LDKKLVCGHCLTIGQHH 127
>gi|260833052|ref|XP_002611471.1| hypothetical protein BRAFLDRAFT_63895 [Branchiostoma floridae]
gi|229296842|gb|EEN67481.1| hypothetical protein BRAFLDRAFT_63895 [Branchiostoma floridae]
Length = 788
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL + G PK+LPC HT C CL + Q CP CR +P
Sbjct: 13 DFLECTICLEPFKG----PKVLPCLHTFCEVCLEKFVTQQDAVKDKFPCPTCRTDTILPE 68
Query: 89 GGVAALPPSFLVNQLLD 105
GGVA L +F + L D
Sbjct: 69 GGVAGLKNNFFIQSLSD 85
>gi|291225322|ref|XP_002732649.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1079
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y PK+LPC HT C CL + + G L+C CR Q
Sbjct: 12 DEVTEDFLSCSICLEIYK----NPKVLPCLHTFCQQCL---VTFKDKSGGVLKCATCRIQ 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHII---PKCSTHNSQELLFCETCDTVFCLQC 140
P + L +F + LLD +QR+ P C T C C C C
Sbjct: 65 CDTP---IQELKSNFFLTSLLDTFQKQRQPSTDHPPVCETCQVTATHRCVDCPQFCCDVC 121
>gi|348540571|ref|XP_003457761.1| PREDICTED: nuclear factor 7, ovary-like [Oreochromis niloticus]
Length = 475
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
S L C CL ++ P LLPCSH+ C CL S R+ CP+C++Q T+
Sbjct: 18 SDLCCPVCLDIF----KDPVLLPCSHSFCKDCLD----SWWRKNPAHDCPVCQKQSTMHD 69
Query: 89 GGVAALPP-SFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCTGGSN 145
PP + + L + +R I P+ CS H+ + LFC + C+ C
Sbjct: 70 ------PPCNLALKNLCETFLEERNQITPEDLCSLHSEKLSLFCMDHQELVCVVCGTSEK 123
Query: 146 HSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRR 205
H S+HT P A ++ L K KVC E + +A A RR
Sbjct: 124 H------SDHTFKPIDKAAQQHKNDLQETLEALKQKLKVCEEVQMKFDQTAEHIKAQARR 177
>gi|297689407|ref|XP_002822134.1| PREDICTED: tripartite motif-containing protein 3 [Pongo abelii]
Length = 773
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 43 MDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 95
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 96 LPEQGVSALQNNFFISSLMEAMQQ 119
>gi|321471401|gb|EFX82374.1| hypothetical protein DAPPUDRAFT_302629 [Daphnia pulex]
Length = 578
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE +TCG CLC +D PK LPCSHT+CL CL I + CP CR
Sbjct: 12 ELNE-LVTCGVCLCEFDTDNRKPKFLPCSHTICLSCLKEI-----NRNYMVACPFCRNIS 65
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCT 141
T + VA L + Q+L L +++ I K ST +C TC TV CT
Sbjct: 66 T--QIHVANLANNSYALQMLKLKEKKQESTI-KSSTLKGPS--WCFTCGTVTKDTCT 117
>gi|156344700|ref|XP_001621281.1| hypothetical protein NEMVEDRAFT_v1g145471 [Nematostella vectensis]
gi|156360545|ref|XP_001625088.1| predicted protein [Nematostella vectensis]
gi|156207051|gb|EDO29181.1| predicted protein [Nematostella vectensis]
gi|156211903|gb|EDO32988.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGKGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLD--LMSRQRRHIIPKCSTHNSQE--LLFCETCDTVFCLQCTGG 143
V +L +F++N L L++ + P C + +S E C CD C QC
Sbjct: 65 PADVPSLKVNFMINSTLSVLLLTSEDSKKKPACESCDSGEPAQGRCNECDHFVCEQCI-- 122
Query: 144 SNHSSTSGDSEHTIIPFS 161
S H HTI+ F
Sbjct: 123 SAHKRFQPVQHHTILSFD 140
>gi|260834556|ref|XP_002612276.1| hypothetical protein BRAFLDRAFT_104889 [Branchiostoma floridae]
gi|229297652|gb|EEN68285.1| hypothetical protein BRAFLDRAFT_104889 [Branchiostoma floridae]
Length = 733
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTCG C ++ PK+LPC HT C CL GT CP C+ ++++P G
Sbjct: 16 LTCGMCKNLFT----QPKVLPCQHTFCQDCLKHHVGG----GGTFPCPECQREVSVPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQRR----------HIIPKCSTHNSQEL-LFCETC 132
VA LP + LV L + Q++ KCS H S+EL LFC+ C
Sbjct: 68 VANLPDNNLVASLCQHVRNQQQKPPTVQETKGQSGIKCSFHPSEELRLFCKPC 120
>gi|334347428|ref|XP_001370166.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 502
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG--TLRCPICREQIT 85
E+ LTC C +++ P++LPCSHT C +CL I + G + CP CR I
Sbjct: 5 EAELTCSICYSIFE----DPRVLPCSHTFCRNCLENILQASGNFYGRRDITCPTCRHIIE 60
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGS 144
IP G+ +LP +F + +++ ++ CS H+SQ L ++C C C
Sbjct: 61 IPPPGIDSLPINFALRAIIEKYEQEEHPDGITCSEHSSQPLNMYCLQDRQPVCGHCLTIG 120
Query: 145 NHSSTSGDSEHTIIPFSIAIKRMSE 169
H H I A K+ E
Sbjct: 121 QHQG------HPIEDLQSAYKKEKE 139
>gi|390368536|ref|XP_003731468.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 337
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL +I ++ + L CP CRE+ ++P G
Sbjct: 13 LECPVCLKFF----KEPKILTCSHTFCKVCLEKILETRRK----LLCPTCREETSVPGGD 64
Query: 91 VAALPPSFLVNQLLDLMSRQRR-----------HIIPKCSTH-NSQELLFCETCDTVFCL 138
V+ L + V L++ + Q + KC TH N E FC C+ C
Sbjct: 65 VSRLQSNITVRSLVEYLETQGQSNCNQEDKPLPQKWNKCKTHPNYDEECFCLDCNKHVCF 124
Query: 139 QCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHK 198
+C G EH I + +L A+E KNKV E S +
Sbjct: 125 KC----------GLLEHPINAHT--------LLDAGAHETAQKNKV-EELASKAGTKIRE 165
Query: 199 ADAYV 203
D YV
Sbjct: 166 VDKYV 170
>gi|443725877|gb|ELU13277.1| hypothetical protein CAPTEDRAFT_146224, partial [Capitella teleta]
Length = 122
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-TLRCPICRE 82
E+ E L C C ++D +H PK LPC HT C CL R+ G + CP CR+
Sbjct: 6 EENYEHVLMCLICRSLFDDNDHQPKFLPCHHTFCKDCLREY----VRQIGEEIECPSCRK 61
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK----CSTHNSQELL-FCETCDTVFC 137
T+P GV+AL +F V + +L+ Q +I C+ H ++L FC C C
Sbjct: 62 VATVPTAGVSALQTNFYVKYIHNLV--QGVYIGDGTNVTCAVHPGRQLKHFCRQCACSVC 119
Query: 138 LQC 140
C
Sbjct: 120 DDC 122
>gi|198418036|ref|XP_002125251.1| PREDICTED: similar to tripartite motif-containing 59 [Ciona
intestinalis]
Length = 325
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 16/141 (11%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS---RIAASQTRETGTLRCPICREQITIP 87
L C C ++D P LL CSHT+C+ C A + ++ CPICR I
Sbjct: 60 LQCPKCGDLFD----RPVLLSCSHTLCMDCAEDAIEYAELELKQRRRFSCPICRSAIKYN 115
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNS---QELLFCETCDTVFCLQCTGGS 144
G+ +LP + + + + ++ + P C H + + L++CE C C C G
Sbjct: 116 ATGIESLPRNINIEEAVARFKKEGKSHYPVCDQHAAFKMEMLMWCEECKVNICPLCAVGD 175
Query: 145 NHSSTSGDSEHTIIPFSIAIK 165
H +H I P + K
Sbjct: 176 EH------KQHKITPMQVVEK 190
>gi|350588131|ref|XP_003482568.1| PREDICTED: tripartite motif-containing protein 3 [Sus scrofa]
Length = 733
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQ 91
>gi|260792776|ref|XP_002591390.1| hypothetical protein BRAFLDRAFT_86897 [Branchiostoma floridae]
gi|229276595|gb|EEN47401.1| hypothetical protein BRAFLDRAFT_86897 [Branchiostoma floridae]
Length = 468
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F+E LTC CL ++ PK+LPC HT C CL A G +CP CR++
Sbjct: 12 FHEE-LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAGR----GGAFQCPNCRQEGR 62
Query: 86 IPRGGVAALPPSFLVNQL---------LDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTV 135
+P GVA LP + LV L L + +R++ +C H S+ L L+C C+
Sbjct: 63 LPPQGVAGLPDNHLVTSLCERLQNQATLSVETREQPQSGNRCCFHLSEVLRLYCNRCNVP 122
Query: 136 FCLQC 140
C +C
Sbjct: 123 VCNEC 127
>gi|431903399|gb|ELK09351.1| Tripartite motif-containing protein 3 [Pteropus alecto]
Length = 768
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 15 MDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSI 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQ 91
>gi|260820375|ref|XP_002605510.1| hypothetical protein BRAFLDRAFT_92933 [Branchiostoma floridae]
gi|229290844|gb|EEN61520.1| hypothetical protein BRAFLDRAFT_92933 [Branchiostoma floridae]
Length = 627
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 60/150 (40%), Gaps = 30/150 (20%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLP---CSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
FL+CG C GE K L C H C CL ++ E GT CP C++ +T
Sbjct: 15 GFLSCGIC------GEAKEKELKASSCLHLFCGDCLR----AKVGEDGTFSCPRCKKDVT 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--------CSTHNSQELLFCETCDTVFC 137
+P GGV L S V+ + M + R + P C +FCE CD C
Sbjct: 65 LPAGGVNDLQDSLWVHDVRKAM--ESRPVAPDSPQAIREVCDHPAENARIFCENCDKAIC 122
Query: 138 LQCTGGSN-HSSTSGDSEHTIIPFSIAIKR 166
C N H H + S AIKR
Sbjct: 123 EDCVQDPNPHKG------HQVSLLSDAIKR 146
>gi|390365930|ref|XP_001184985.2| PREDICTED: tripartite motif containing 13-like [Strongylocentrotus
purpuratus]
Length = 175
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 70/166 (42%), Gaps = 32/166 (19%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK L CSHT C CL + AS + L CP CRE+ ++P G
Sbjct: 13 LECPVCLSFFKD----PKNLTCSHTFCKGCLETVLASHRK----LLCPTCREETSVPGGD 64
Query: 91 VAALPPSFLVNQLLDLMS-------RQRRHIIP----KCSTH-NSQELLFCETCDTVFCL 138
V L P+ +V L++ + Q +P KC H E FC C C
Sbjct: 65 VGRLKPNIIVRSLVEDVETQGHSNCNQEDKSLPPKWNKCQKHPTDDEECFCLNCKKYVCF 124
Query: 139 QCTGGSNHSSTSGDSEHTIIPFSI-------AIKRMSEILLYKANE 177
+C G H+ + HTI+ + ++ E LL K NE
Sbjct: 125 KC-GMLEHAKDA----HTILEAGVHETAELGQMRSCPEELLRKVNE 165
>gi|260798148|ref|XP_002594062.1| hypothetical protein BRAFLDRAFT_68498 [Branchiostoma floridae]
gi|229279295|gb|EEN50073.1| hypothetical protein BRAFLDRAFT_68498 [Branchiostoma floridae]
Length = 515
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC C+ ++ PK+LPC HT C CL A + +CP CR+++ +P G
Sbjct: 16 LTCSICMELFT----RPKVLPCQHTFCQDCLRDHAEVRA----PFQCPNCRQEVKLPPQG 67
Query: 91 VAALPPSFLVNQLLDLM----------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
VA LP + + + +L +R++ +C H S+E+ L+C+ C+ C +
Sbjct: 68 VAGLPDNKMAANMCELRLQNQAILSRETREQSQFGNRCGFHPSEEVRLYCKQCNIPVCNE 127
Query: 140 C 140
C
Sbjct: 128 C 128
>gi|156360537|ref|XP_001625084.1| predicted protein [Nematostella vectensis]
gi|156211899|gb|EDO32984.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGKGKLVCPLCKSEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLD--LMSRQRRHIIPKCSTHNSQE--LLFCETCDTVFCLQCTGG 143
V +L +F++N +L L++ + P C + +S E C CD C QC
Sbjct: 65 PADVPSLKVNFMINSILSVLLLTSEDSKKKPACESCDSGEPAQGRCNECDHFVCEQCI-- 122
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
S H HTI+ IK + + KA+ C
Sbjct: 123 STHKRFRPVQHHTILSLD-EIKSGKLLAMSKASFC 156
>gi|291244525|ref|XP_002742146.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 1 MTLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC 60
M + S L T L E E FL C CL Y PK+LPC HT C C
Sbjct: 1 MAAAASDVLITEDILTE--------IREEFLYCAICLERYS----EPKILPCHHTFCKKC 48
Query: 61 LSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-CS 119
L ++ Q + L CP C + I P ++ L +F +N LLD +S + + P C
Sbjct: 49 LVQLTEKQAQ--MLLICPTCSKPIKEP---ISNLQSNFFMNSLLDKVSSKVETVTPTVCD 103
Query: 120 THNSQELLF-CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
E+ F C C C C+ H + + H ++P
Sbjct: 104 LCEENEVSFTCIECKEYLCKFCSKA--HQRSKSTASHHVLPID 144
>gi|341901319|gb|EGT57254.1| hypothetical protein CAEBREN_12231 [Caenorhabditis brenneri]
Length = 570
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 35/156 (22%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR--------CPIC 80
S L CG C +D +H PK+L C HT C C+ +I RE ++ CP
Sbjct: 121 SLLECGVCCHDFDDKDHVPKMLSCGHTFCWQCILKI----EREHNSMNMFGRPAYACPFD 176
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--------------CSTHNSQE- 125
R +I +P LP + LV LDL+ +++ + K C ++ E
Sbjct: 177 RSEIHLP---ACMLPKNRLV---LDLIEEKKQEELRKSLLAPLLVEDPDVPCYENDRHES 230
Query: 126 LLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
++CE C FC C GS HSS S+HT IP +
Sbjct: 231 EVYCEDCKESFCNSCY-GSVHSSKML-SKHTNIPVT 264
>gi|260812615|ref|XP_002601016.1| hypothetical protein BRAFLDRAFT_128153 [Branchiostoma floridae]
gi|229286306|gb|EEN57028.1| hypothetical protein BRAFLDRAFT_128153 [Branchiostoma floridae]
Length = 479
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLL-PCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
FL C C ++ PK+L PC HT C CL +ET CP+C ++T+P
Sbjct: 83 DFLECSICCDIFK----KPKILIPCLHTFCALCLQEWVKRNVKET--FPCPLCCHEVTLP 136
Query: 88 RGGVAALPPSFLVNQLLDLMSRQR--RHIIPKCSTHNSQE----LLFCETCDTVFCLQCT 141
+ GVA L +F + L++ ++ Q RH + N E C C C +C
Sbjct: 137 QNGVAGLKDNFFMESLVEALAEQNNIRHGKDGINCTNCDEGKAATSRCSECAEFLCARCE 196
Query: 142 GGSNHSSTSGDSEHTIIPFS 161
S H HT+ PF
Sbjct: 197 --SAHRVVKATKGHTLFPFE 214
>gi|291234992|ref|XP_002737430.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 680
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 21/163 (12%)
Query: 1 MTLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC 60
M ++ S + ++ L E NE FL C CL Y PK+LPC HT C C
Sbjct: 1 MAVAASEVIDDDAVLAE--------INEDFLCCAICLERYSA----PKILPCQHTFCKKC 48
Query: 61 LSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-CS 119
L ++A T CP C + IP + L +F ++ LLD + + P+ C
Sbjct: 49 LVQLAKKVA--PNTFMCPTCNRSVKIP---INDLQSNFFMSSLLDKIPEKLDAATPRVCE 103
Query: 120 THNSQELL-FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
E+ C C C CT H T H ++
Sbjct: 104 FCEENEVTSICVECQQYSCTSCT--RVHKKTKATKSHQVLSLD 144
>gi|326926209|ref|XP_003209296.1| PREDICTED: tripartite motif-containing protein 59-like [Meleagris
gallopavo]
Length = 408
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRNCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ IP G +LP +F + +++ ++ + CS H Q L ++C + C C
Sbjct: 61 TVVEIPASGTESLPTNFALKAIIEKYRQEDHSDVATCSEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 TGGSNHSSTSGDSEHT 156
H+ D H+
Sbjct: 121 LTIGKHNGHPIDDLHS 136
>gi|260835097|ref|XP_002612546.1| hypothetical protein BRAFLDRAFT_75331 [Branchiostoma floridae]
gi|229297923|gb|EEN68555.1| hypothetical protein BRAFLDRAFT_75331 [Branchiostoma floridae]
Length = 343
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 25/135 (18%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLR---CPICREQITIPRGGVAALPPSFLVNQL 103
PK LPC HT C CL+ +A G+LR CP+CR +++P GVA LP + + ++
Sbjct: 24 PKSLPCGHTFCEECLTELA-------GSLRDLCCPLCRRDVSLPVDGVAGLPTDYRLAKM 76
Query: 104 LDLMSR----QRRHIIPKCSTHNSQEL-LFCET--CDTVFCLQCTGGSNHSSTSGDSEHT 156
+ S Q + + +C H + L FC+T C C QC S+ H+
Sbjct: 77 SEKFSEVTADQGQCVTQRCDYHPYEHLKYFCKTKACGVPICGQCIEDSHGG-------HS 129
Query: 157 IIPFSIAI-KRMSEI 170
I+ A+ KRM ++
Sbjct: 130 IVVVKQAVEKRMKKV 144
>gi|390335759|ref|XP_003724215.1| PREDICTED: uncharacterized protein LOC590474 [Strongylocentrotus
purpuratus]
Length = 813
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL ++ PKLLPC HT+CL C+ + + ++CP CR+Q T P
Sbjct: 8 LLECPMCLELFTSSSRKPKLLPCQHTLCLECMDML-----NQGNRIQCPQCRQQHTCPGD 62
Query: 90 GVAALPPSFLVNQLLDLMSR 109
G A LP +F + LLD+ +
Sbjct: 63 GPAQLPNNFTMLALLDVQQK 82
>gi|357630922|gb|EHJ78730.1| hypothetical protein KGM_04358 [Danaus plexippus]
Length = 864
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 46 TPKLLPCSHTVCLHCLSRIAASQTRETG----TLRCPICREQITIPRGGVAALPPSFLVN 101
+P++L C H C C+ ++ ++ ++ + CP+C+++ +P GG A+LP +++
Sbjct: 43 SPRVLSCLHVFCEACIDKLMVNEAGDSLKYDLAVECPLCKQETKMPGGGAASLPSDYVLT 102
Query: 102 QLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPF 160
+LD+ S + ++ C + C C C C S H H ++PF
Sbjct: 103 NILDV-SAMDQSVVCTCCKSKEPAVARCTDCSHFLCSNCN--SAHEFMRCFENHRVVPF 158
>gi|260835105|ref|XP_002612550.1| hypothetical protein BRAFLDRAFT_120965 [Branchiostoma floridae]
gi|229297927|gb|EEN68559.1| hypothetical protein BRAFLDRAFT_120965 [Branchiostoma floridae]
Length = 389
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 25/135 (18%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLR---CPICREQITIPRGGVAALPPSFLVNQL 103
PK LPC HT C CL+ +A G+LR CP+CR +++P GVA LP + + ++
Sbjct: 70 PKSLPCGHTFCEECLTELA-------GSLRDLCCPLCRRDVSLPVDGVAGLPTDYRLAKM 122
Query: 104 LDLMSR----QRRHIIPKCSTHNSQEL-LFCET--CDTVFCLQCTGGSNHSSTSGDSEHT 156
+ S Q + + +C H + L FC+T C C QC S+ H+
Sbjct: 123 SEKFSEVTADQGQCVTQRCDYHPYEHLKYFCKTKACGVPICGQCIEDSHGG-------HS 175
Query: 157 IIPFSIAI-KRMSEI 170
I+ A+ KRM ++
Sbjct: 176 IVVVKQAVEKRMKKV 190
>gi|156360535|ref|XP_001625083.1| predicted protein [Nematostella vectensis]
gi|156211898|gb|EDO32983.1| predicted protein [Nematostella vectensis]
Length = 233
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQLLD---LMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTG 142
V +L +F++N +L L++ P C + +S E C CD C QC
Sbjct: 64 PADVPSLKVNFMINSILSVLPLLTSDDSKKKPACESCDSGEPAQGRCNECDHFVCEQCI- 122
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
S H HTI+ IK + + KA+ C
Sbjct: 123 -STHKRFRPVQHHTILSLD-EIKSGKLLAMSKASFC 156
>gi|268560964|ref|XP_002646332.1| Hypothetical protein CBG12045 [Caenorhabditis briggsae]
Length = 840
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR-ETGTLRCPICREQITIPRG 89
+C C ++ G+ PK+ PC HT CL C+ + ++T T+ CP CR+ P
Sbjct: 154 FSCMICYDPFNTGKRIPKVFPCGHTFCLSCVGGLMKNRTYLSRSTVVCPTCRQNTQYP-- 211
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSST 149
+ P N + M QR+ + + +E+L C TC V + N S
Sbjct: 212 -MTLNPEKVPTNYSVLSMLEQRKE---ESNAKTEKEMLECNTCHEVLDGEKVTLCNESEC 267
Query: 150 SGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
S+ + + +IKRM +L+ + C+ KN
Sbjct: 268 QNISDEGKLLGTDSIKRMKCLLV--CSTCIEKN 298
>gi|156363296|ref|XP_001625981.1| predicted protein [Nematostella vectensis]
gi|156212840|gb|EDO33881.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQITI 86
E +TC C+ ++ P++LPC H+ C HCL +A S+ R G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAVHSEGR--GKLVCPLCKAEFQI 62
Query: 87 PRGGVAALPPSFLVNQL---LDLMSRQRRHIIPKCSTHNSQE--LLFCETCDTVFCLQCT 141
V +L +F++N + L L++ + P C + +S E C CD C QC
Sbjct: 63 SPADVPSLKVNFMINSIISVLPLLTSEDSKKKPACESCDSGEPAQGRCNECDHFVCEQCI 122
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
S H HTI+ IK + + KA+ C
Sbjct: 123 --SAHKRFQPVQHHTILSLD-EIKSGKLLAMSKASFC 156
>gi|260806062|ref|XP_002597904.1| hypothetical protein BRAFLDRAFT_234182 [Branchiostoma floridae]
gi|229283173|gb|EEN53916.1| hypothetical protein BRAFLDRAFT_234182 [Branchiostoma floridae]
Length = 716
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 19/119 (15%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
CG CL + + P+ LPC H C CL A + R L+CP+CRE++ +P GV+
Sbjct: 1 CGLCLQLAE----RPRALPCLHAFCEGCLREYAHGKRR----LKCPVCRERVKLPSEGVS 52
Query: 93 ALPPSFLVN----------QLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
ALP + V Q+ R KC H ++L L C+ C CLQC
Sbjct: 53 ALPDNNGVRSHTKKLNDYAQITPSEDTIRGEGTQKCVHHPWEDLRLVCQHCHVPVCLQC 111
>gi|260782164|ref|XP_002586161.1| hypothetical protein BRAFLDRAFT_109857 [Branchiostoma floridae]
gi|229271254|gb|EEN42172.1| hypothetical protein BRAFLDRAFT_109857 [Branchiostoma floridae]
Length = 580
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + + + + + Q
Sbjct: 68 VAGLPDNLMAANMCERLQNQ 87
>gi|198420733|ref|XP_002119582.1| PREDICTED: similar to zinc finger protein ZF(Bbox/RING)-1 [Ciona
intestinalis]
Length = 993
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
N+ FLTC CL Y P LL C H+ C C+ + + + GTL CP+CR+ +
Sbjct: 11 LNDEFLTCQICLSTY----TEPVLLDCQHSFCRSCVGQCLPAVS---GTLHCPVCRQATS 63
Query: 86 IPRG-GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL 126
+P+ GVA L +F + L+D + ++RR + T E+
Sbjct: 64 LPKKFGVATLKSNFFLQSLIDAV-KERRSSVSSVVTMGENEV 104
>gi|341902461|gb|EGT58396.1| hypothetical protein CAEBREN_09977 [Caenorhabditis brenneri]
Length = 113
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 31 LTCGTCLCMYDG--GEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
L C CL Y +P++L C HTVC C+ I ASQ +RCP C+++ +P
Sbjct: 30 LKCNVCLLKYSATSKNRSPRILANCGHTVCFGCIKNITASQK----VVRCPFCKKRTNMP 85
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHI 114
G V LP ++ + L++ M++++ I
Sbjct: 86 HGTVKKLPKNYAIIGLIEEMNKEKNEI 112
>gi|308387350|ref|NP_001184142.1| muscle RING finger 1 [Oncorhynchus mykiss]
gi|308053490|gb|ADO00982.1| muscle RING finger 1 [Oncorhynchus mykiss]
Length = 359
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 26/176 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
ES L+C CL M+ + +LPC H +C C S + S+ G RCP CR ++
Sbjct: 19 ESQLSCPICLEMF---QKPVVILPCQHNLCRGCASDLYDSRNPYHYSGGIFRCPTCRFEV 75
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ-------------------RRHIIPKCSTHNSQE 125
+ R GV L + LV ++D+ +Q + P C+ H +
Sbjct: 76 VLDRHGVYGLQRNLLVENIIDIYKQQPESGGGEVGSNAADPPLKDKDTKEPMCTEHEDER 135
Query: 126 L-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVS 180
+ ++C TC T C C H +I A R + LL N CV
Sbjct: 136 INIYCVTCQTPTCSMCKVFGQHKDCEVSPLQSIYDTQKAELRNAIDLLAAGNSCVQ 191
>gi|348534771|ref|XP_003454875.1| PREDICTED: tripartite motif-containing protein 59-like [Oreochromis
niloticus]
Length = 429
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
D E LTC C C++ P++LPCSHT C CL + T + L+CP
Sbjct: 2 DNLEEDLTCSVCYCLFSD----PRVLPCSHTFCKTCLDNLLQVSTNYSIWRPLRLPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR + +P GV ALP + + +++ P C H+ Q L ++C + C
Sbjct: 58 NCRSVVELPPAGVDALPTNVSLRAIVEKYQMDSEPRPPSCPEHHRQPLNMYCIQDRQLIC 117
Query: 138 LQC-TGGSNHSSTSGDSEHTIIPF----SIAIKRMSE 169
C T G +H D + I S +KR+SE
Sbjct: 118 GLCLTVGQHHGHPIDDLQAAFIREKQTPSQLLKRLSE 154
>gi|260830067|ref|XP_002609983.1| hypothetical protein BRAFLDRAFT_85950 [Branchiostoma floridae]
gi|229295345|gb|EEN65993.1| hypothetical protein BRAFLDRAFT_85950 [Branchiostoma floridae]
Length = 499
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C C Y PK+L C HT CL CL + Q E + CP CR +
Sbjct: 10 ISDDFLECKVCYEPY----KIPKVLACLHTFCLECLEQSVEKQG-ERNRVFCPTCRTPTS 64
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQR----RHIIPKCST--HNSQELLF--CETCDTVFC 137
+P GGV L +F V L D + R +H CS NS E C +CD C
Sbjct: 65 LPEGGVTKLKDNFFVESLRDTVDIYRKIHSKHEDVMCSNCLENSPEAASARCLSCDEFLC 124
Query: 138 LQCTGGSNHSSTSGDSEH 155
C N +T+ +EH
Sbjct: 125 PDCV---NEINTTQYNEH 139
>gi|241997422|ref|XP_002433360.1| nhl repeat-containing protein, putative [Ixodes scapularis]
gi|215490783|gb|EEC00424.1| nhl repeat-containing protein, putative [Ixodes scapularis]
Length = 631
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 45 HTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLL 104
H PK+LPC H C CL + +T LRC CR ++ +P+ G++ P S + +L
Sbjct: 39 HRPKMLPCQHAFCFLCLQN--SVMKADTSKLRCAKCRTEVPLPKEGISGFPSSIHLQNIL 96
Query: 105 DLMSRQR---RHIIPKCSTHNSQELLFCETCDTVFCLQC 140
DL+ ++ CS +FCE C +C C
Sbjct: 97 DLLESDYASMDELLQCCSCQTVSCTVFCEHCKLSYCPLC 135
>gi|443716539|gb|ELU08021.1| hypothetical protein CAPTEDRAFT_187752 [Capitella teleta]
Length = 630
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
V NYE E LTC CL +Y P +LPCSH+VC CL I S++++ G L CP
Sbjct: 38 VEFNYESMEEE-LTCPVCLELY----ADPLMLPCSHSVCKKCLHDILDSKSKQ-GGLECP 91
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK 117
CR+ + + + +LP + + ++ + +R I K
Sbjct: 92 SCRKVVDVNHDKMESLPKNLALENIVFRYTEERSKSIRK 130
>gi|291227296|ref|XP_002733628.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 664
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI- 86
+ FL C C +G ++PKLLPC H+ C +CL + S + E +L CP+C++ +++
Sbjct: 12 DQFLRCKLC----EGDFNSPKLLPCLHSFCRNCLDGLLKSDSNER-SLNCPVCKQYVSLY 66
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRR------HIIPKCSTHNSQELLFCETCDTVFCLQC 140
+ GV L + + L + M ++ I+ C + ++ +C CD C C
Sbjct: 67 GKHGVDGLRDNEFIASLTETMGMLQKIRNPVNAIVCTCCSDGNEAKSYCPACDDFLCDDC 126
Query: 141 TGG-------SNHSST 149
G NH+S
Sbjct: 127 VGAHGRLKVFKNHASV 142
>gi|71896955|ref|NP_001026491.1| tripartite motif-containing protein 59 [Gallus gallus]
gi|82197903|sp|Q5ZMD4.1|TRI59_CHICK RecName: Full=Tripartite motif-containing protein 59
gi|53127452|emb|CAG31109.1| hypothetical protein RCJMB04_2h17 [Gallus gallus]
Length = 408
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRSCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ IP G +LP +F + +++ ++ + CS H Q L ++C + C C
Sbjct: 61 SIVEIPASGTESLPINFALKAIIEKYRQEDHSDVATCSEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 TGGSNHSSTSGDSEHT 156
H+ D H+
Sbjct: 121 LTIGKHNGHPIDDLHS 136
>gi|291225545|ref|XP_002732762.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 731
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL + TPK+LPC H+ C HCL + +G L CPICR + +P
Sbjct: 14 EEMLTCSLCLEPF----RTPKVLPCLHSFCQHCLE---LWMKKNSGKLTCPICRRE--MP 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLF---CETCDTVFCLQCTGGS 144
V+AL +FL+ +L MS + S QE + C C C CT
Sbjct: 65 DNDVSALQTNFLLTELSGYMSTIKLLKTEDKSCEACQETMAVSRCTNCSQNLCEMCTKA- 123
Query: 145 NHSSTSGDSEHTIIPFS 161
H + H++I
Sbjct: 124 -HRNLKFTKAHSVIDLK 139
>gi|156347788|ref|XP_001621753.1| hypothetical protein NEMVEDRAFT_v1g42496 [Nematostella vectensis]
gi|156207993|gb|EDO29653.1| predicted protein [Nematostella vectensis]
Length = 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQITI 86
E +TC C+ ++ P++LPC H+ C HCL +A S+ R G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAVHSEGR--GKLVCPLCKAEFQI 63
Query: 87 PRGGVAALPPSFLVNQL---LDLMSRQRRHIIPKCSTHNSQE--LLFCETCDTVFCLQCT 141
V +L +F++N + L L++ + P C + +S E C CD C QC
Sbjct: 64 SPADVPSLKVNFMINSIISVLPLLTSEDSKKKPVCESCDSGEPAQGRCNECDHFVCEQCI 123
Query: 142 GGSNHSSTSGDSEHTIIPFS 161
S H + HTI+
Sbjct: 124 --SAHKNIKTLQHHTILSLD 141
>gi|291242614|ref|XP_002741201.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 768
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 20/143 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++ PK+LPC H+ C CL AA E LRCP C ++ + G
Sbjct: 12 LSCPLCLDRFN----DPKVLPCLHSFCRRCLDDRAA----EPDILRCPTCHHEVPLGDNG 63
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHN-SQELLFCETCDTV-----FCLQCTGG- 143
+ +LP ++L+N +LD++ Q + + + C +CD + C +C
Sbjct: 64 IDSLPSNYLLNNILDVVGTQDEDLENGFGVDRLTDKQRLCSSCDDIRIATSLCRECNEHL 123
Query: 144 -----SNHSSTSGDSEHTIIPFS 161
S H EHTI+ +
Sbjct: 124 CDRCVSAHQRVRLTKEHTIVQLN 146
>gi|72090160|ref|XP_789595.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 243
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK+L CSHT C CL+ + + LRCPICR + +P V+ LP + + L+D
Sbjct: 25 PKILSCSHTYCKTCLNNLLECHGNDQ-MLRCPICRAETKVPNQDVSKLPANLALKSLIDD 83
Query: 107 MSRQRRHIIPKCSTHNS-QELLFCETCDTVFCLQC 140
+ R + C + Q + +C+ C T C+ C
Sbjct: 84 V-RDQYQFCTNCEFEDKLQAVAYCQDCGTYLCITC 117
>gi|291226350|ref|XP_002733156.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 378
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
N+ FL C C +D E PK+LPC H+ C+ CL ++ ++ T+ CP CR++
Sbjct: 13 INDEFLKCPVC---FDHCE-KPKVLPCLHSFCMKCLEKLVKDGSK---TVECPKCRQEEI 65
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQR 111
+P G+ L +F ++ L + MS +
Sbjct: 66 LPENGIHGLQDNFFISDLAESMSTWK 91
>gi|391336193|ref|XP_003742466.1| PREDICTED: RING finger protein nhl-1-like [Metaseiulus
occidentalis]
Length = 851
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC C+ + PKLLPC HT C C+ + R+ ++CP CR + I
Sbjct: 9 EQLLTCAICMDRFK----NPKLLPCQHTYCCDPCMEGLVDYARRQ---IKCPECRTEHRI 61
Query: 87 PRGGVAALPPSFLVNQLLDL-------MSRQRRHIIPKCST-HNSQELLFCETCDTVFCL 138
P GV LP + + + L+L ++ +CS Q L+ C C+ C
Sbjct: 62 PYNGVQTLPTNVTLMRFLELHRSMTGEEPEPEEAMMGRCSVCSEKQHLISCHHCNKKICA 121
Query: 139 QC 140
C
Sbjct: 122 DC 123
>gi|390355582|ref|XP_003728581.1| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 142
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK+L CSHT C CL + + LRCP+CR + +P V+ LP S + L++
Sbjct: 25 PKILSCSHTYCKACLDNLLECHGNDQ-MLRCPVCRAETQVPNREVSKLPASLALKSLIED 83
Query: 107 MSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
+ Q + S Q +++C+ C C+ C + HS H ++ S
Sbjct: 84 VKNQYQFCTNCKSEDKPQAVVYCQDCGMYLCITC--HNKHSQWQNFISHEVLAMS 136
>gi|115928384|ref|XP_001176895.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like
[Strongylocentrotus purpuratus]
Length = 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRC 77
++ E+ NE L C C PKLL C H C CL + + +G L+C
Sbjct: 2 AAQLSVENLNEK-LVCAVC----QNTLKNPKLLACFHAFCEECLKQGDQIEVC-SGELQC 55
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR--HII-PKCSTHNSQELLFCETCDT 134
P C + +P GVA L + LV +L++++ +++ HI+ C S +C C +
Sbjct: 56 PECSKVTDLPEEGVAGLDWNPLVCRLVEVLQAKKKASHIMCDACGDSESPLTTYCRDCLS 115
Query: 135 VFCLQCTGGSNHSSTSGDSEHT-----IIPFSIAIKRMSEILLYKANEC 178
C C HT II +I IK M E L KA+EC
Sbjct: 116 FICDSCASYHGKMKLLLKDHHTVPLDKIINGTIQIKWMEEGLWRKAHEC 164
>gi|156363310|ref|XP_001625988.1| predicted protein [Nematostella vectensis]
gi|156212847|gb|EDO33888.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQL---LDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTG 142
V +L +F++N + L L++ + P C + +S E C CD C QC
Sbjct: 64 PADVPSLKVNFMINSIISVLPLLTSEDSKKKPVCESCDSGEPAQGRCNECDHFVCEQCI- 122
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
S H HTI+ IK + + KA+ C
Sbjct: 123 -SAHKRFRPVQHHTILSLD-EIKSGKLLAMSKASFC 156
>gi|390360925|ref|XP_003729801.1| PREDICTED: tripartite motif containing 13-like [Strongylocentrotus
purpuratus]
Length = 399
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 28/153 (18%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S+ +E F ++ L C CL + PK+L CSHT C CL + S+ G L CP+
Sbjct: 25 SLKHEAFQKN-LECPVCLSFFK----EPKILTCSHTFCKGCLETLLESR----GKLLCPM 75
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQR-------------RHIIPKCSTH-NSQE 125
C E+ ++P G V L + +V L++ + Q + KC H N E
Sbjct: 76 CGEETSVPGGDVGRLQSNIIVRSLVEDVETQGQVGSNSNQENESFQRKWNKCRKHPNYDE 135
Query: 126 LLFCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
FC C C +C G S H+ + HTI+
Sbjct: 136 ECFCLNCMKHVCCKC-GISEHAKDA----HTIL 163
>gi|126338434|ref|XP_001370427.1| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 420
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRETGTLR----CPICR 81
E LTC C +++ P++LPCSHT C +CL + A+ LR CP CR
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYVRRALRIPLTCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQ 139
+ IP G+ +LP +F + +++ ++ + C H+SQ L ++CLQ
Sbjct: 61 RTVEIPPPGIESLPINFALRAIIEKYEQEEHSDVITCPEHSSQPL-------NIYCLQ 111
>gi|260792770|ref|XP_002591387.1| hypothetical protein BRAFLDRAFT_86894 [Branchiostoma floridae]
gi|229276592|gb|EEN47398.1| hypothetical protein BRAFLDRAFT_86894 [Branchiostoma floridae]
Length = 151
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 25/146 (17%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL A + +CP CR + +P G
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCLQDHAG----RGRSFQCPNCRLKFKLPPQG 67
Query: 91 VAALPPSFLVNQLLDLM---------SRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
VA LP + LV L + + +R++ CS H S+E+ L+C C+ C +C
Sbjct: 68 VAGLPNNHLVTSLCERLQNQASLSGETREQPQSGNWCSFHPSEEVKLYCNQCNVPVCSEC 127
Query: 141 TGGSNHSSTSGDSEHTIIPFSIAIKR 166
+ S+H I IKR
Sbjct: 128 LDEMH-------SDHETISLKKXIKR 146
>gi|291243265|ref|XP_002741523.1| PREDICTED: tripartite motif-containing 28 protein-like
[Saccoglossus kowalevskii]
Length = 263
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E +E FL CG C Y PKLLPC H+ C CL ++ A ++ + + CP+CR +
Sbjct: 12 EKIDEDFLNCGICSDRYTK----PKLLPCQHSFCEECLVKVVA-KSGQPDVIICPLCRRE 66
Query: 84 ITIPRGGVAALPPSFLVNQLLD 105
I GG++ + + +NQL++
Sbjct: 67 HDI-HGGISKIENNMFINQLVE 87
>gi|291236420|ref|XP_002738137.1| PREDICTED: tripartite motif-containing 2-like [Saccoglossus
kowalevskii]
Length = 421
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+D +E L C C + +PK+LPC HT C CL ++ G L CP CR+
Sbjct: 15 DDIDEKILLCPICQERFT----SPKILPCVHTFCEKCLKSWIE---KKYGKLTCPSCRKP 67
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC 118
IP GGV L + +N++L++ S+ + + C
Sbjct: 68 HVIPPGGVRELNNNLFINEMLEMFSKVKIGQVTAC 102
>gi|72027903|ref|XP_795379.1| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like
[Strongylocentrotus purpuratus]
Length = 313
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + + LRCP+CR + +P
Sbjct: 13 LECPVCLNTFTD----PKILSCSHTYCKACLDNLLECHGNDQ-MLRCPVCRAETQVPNRE 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
V+ LP S + L++ M Q + S Q + +C C C+ C HS
Sbjct: 68 VSKLPASQALKSLIEDMKSQHQFCTNCKSEDKPQAVAYCRDCGKYLCIPCQNA--HSMWQ 125
Query: 151 GDSEHTIIPFS 161
H ++ S
Sbjct: 126 DFISHEVLAMS 136
>gi|390368048|ref|XP_003731380.1| PREDICTED: midline-1-like [Strongylocentrotus purpuratus]
Length = 394
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL +Y P LL CSHT C CLSR+ SQ +E+ + CP+CR+ +P
Sbjct: 13 LQCPICLNIY----KEPTLLACSHTFCKGCLSRLFKSQ-QESAKISCPVCRKSTAVPSRD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTGGSNHSS 148
V+ L + + +++ + Q + C+ + L +C+ CD C+ C H+
Sbjct: 68 VSNLQINIPIQAMVEDIKNQSQ----ICTICKDKPLAATYCQECDDFMCVDCY--KTHAK 121
Query: 149 TSGDSEHTIIPFSIAI 164
S H ++ I
Sbjct: 122 WDKFSGHDVVKVDDII 137
>gi|291241921|ref|XP_002740858.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 701
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y PK+LPC HT C CL + + G L+C CR Q
Sbjct: 12 DEVTEDFLSCSICLEIY----KNPKVLPCLHTYCQQCL---VTFKVKSGGVLKCATCRIQ 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD RQR+
Sbjct: 65 CDSP---IEELKSNFFLTSLLDTFQRQRQ 90
>gi|308485130|ref|XP_003104764.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
gi|308257462|gb|EFP01415.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
Length = 1650
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-RETGTLRCPICREQITIPRG 89
+C C ++ G+ TPK+ PC HT CL C+ + +++ + T+ CP CR+ G
Sbjct: 896 FSCVICYDSFNTGKRTPKVFPCGHTFCLSCVKGLMTNRSFLSSSTVICPTCRQNTRFSTG 955
Query: 90 -GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVF 136
G +P +F V +L+ ++ ++ +E+L C C V+
Sbjct: 956 LGAEKIPTNFSVLSMLEQRKEEKLAVL-------EEEMLECSECKIVY 996
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S++ + E +C C + PK+LPC H++C C++ + ++ L CP
Sbjct: 11 SVSPSEAAEEKPSCMVCYNDFHSKSRVPKILPCGHSLCQDCITTLLSNDGFMIRRLACPT 70
Query: 80 CREQITIPRGGVAALPPSFLVNQLL------DLMSRQRRHIIPKCSTH-NSQELLFCETC 132
CR+ + G P +F + +L D + + + C + + L C+TC
Sbjct: 71 CRQTHSCSFGNSNTFPTNFSLRDMLEKQEASDKLEKGNEYSCRHCKKEFHEKNLRKCDTC 130
>gi|260836373|ref|XP_002613180.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
gi|229298565|gb|EEN69189.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
Length = 612
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ E FL+C C + PK+LPC HT C CL A +TR+ +CP+CR
Sbjct: 13 QQMREEFLSCSICTDTF----KKPKVLPCQHTFCSTCLRDWA--ETRKP--FQCPMCRVS 64
Query: 84 ITIPRGGVAALPPSFLV----NQLLDLMS----RQRRHIIPKCSTHNSQEL-LFCETCDT 134
+ +P GV+ + LV Q D +S + + KC H Q++ LFC+ C
Sbjct: 65 VDLPAQGVSGFQDNRLVAGLCEQFSDKLSTSPPKAEQRNQGKCYFHPGQDIALFCQQCKM 124
Query: 135 VFCLQCT 141
C C
Sbjct: 125 PACNHCV 131
>gi|390368050|ref|XP_003731381.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 176
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D L C CL +Y P LL CSHT C CLSR+ SQ +E+ + CP+CR+
Sbjct: 7 DLLSQNLQCPICLNIY----KEPTLLACSHTFCKGCLSRLFKSQ-QESAKISCPVCRKST 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTG 142
+P V+ L + + +++ + Q + C+ + L +C+ CD C+ C
Sbjct: 62 AVPSRDVSNLQINIPIQAMVEDIKNQSQI----CTICKDKPLAATYCQECDDFMCVDCY- 116
Query: 143 GSNHSSTSGDSEHTIIPFSIAI 164
H+ S H ++ I
Sbjct: 117 -KTHAKWDKFSGHDVVKVDDII 137
>gi|268574858|ref|XP_002642408.1| C. briggsae CBR-NHL-1 protein [Caenorhabditis briggsae]
Length = 979
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|17553622|ref|NP_499028.1| Protein NHL-1 [Caenorhabditis elegans]
gi|6226931|sp|Q03601.2|NHL1_CAEEL RecName: Full=RING finger protein nhl-1
gi|3877606|emb|CAA79562.1| Protein NHL-1 [Caenorhabditis elegans]
Length = 974
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|156401591|ref|XP_001639374.1| predicted protein [Nematostella vectensis]
gi|156226502|gb|EDO47311.1| predicted protein [Nematostella vectensis]
Length = 636
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 19/122 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR-G 89
LTC CL + PK+LPC HT C CL + S G L CP CR + ++
Sbjct: 20 LTCSVCLEQF----REPKMLPCFHTFCKECLEKTKQSF---RGNLLCPTCRTKTSVTEHE 72
Query: 90 GVAALPPSFLVNQLLDLMSRQRR----------HIIPKCSTHNSQEL-LFCETCDTVFCL 138
+ LP +F+VN++LD + + ++ C H +EL L+C C C
Sbjct: 73 MIQKLPNNFIVNRVLDALGAENSGELKYPNLGPNLKSFCINHKEKELDLYCRDCQICVCT 132
Query: 139 QC 140
C
Sbjct: 133 IC 134
>gi|291233705|ref|XP_002736792.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 694
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE FL C CL Y PK+LPC HT C CL ++A + TL CP C +
Sbjct: 17 EINEDFLCCAICLERY----SDPKILPCQHTFCKKCLVQLAEKGVAD--TLMCPTCNRSV 70
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD-TVFCLQC 140
+P + L +F ++ LLD + + PK FCE + T C++C
Sbjct: 71 KVP---INDLQSNFFMSSLLDKIPEKLVAGTPKVCE-------FCEENEVTSICVEC 117
>gi|308501841|ref|XP_003113105.1| CRE-NHL-1 protein [Caenorhabditis remanei]
gi|308265406|gb|EFP09359.1| CRE-NHL-1 protein [Caenorhabditis remanei]
Length = 986
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|189241070|ref|XP_001808548.1| PREDICTED: similar to AGAP007135-PA [Tribolium castaneum]
Length = 1245
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ CL + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCLEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL-----------MSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
P GV P + + + L+L S Q ++ +C+ + + FC CD
Sbjct: 58 PYQGVQGFPTNVTLQRFLELHIEITGELPDPTSGQ---VMERCNVCSEKAYCSFCSHCDK 114
Query: 135 VFCLQCTG 142
C +C G
Sbjct: 115 KICEECKG 122
>gi|156346082|ref|XP_001621433.1| hypothetical protein NEMVEDRAFT_v1g144926 [Nematostella vectensis]
gi|156207358|gb|EDO29333.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQL---LDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTG 142
V +L +F++N + L L++ + P C + +S E C CD C QC
Sbjct: 64 PADVPSLKVNFMINSIISVLPLLTSEDSKKKPVCESCDSGEPAQGRCNECDHFVCEQCI- 122
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
S H HTI+ IK + + KA+ C
Sbjct: 123 -SAHKRFQPVQHHTILSLD-EIKSGKLLAMSKASFC 156
>gi|403349782|gb|EJY74333.1| Kelch motif family protein [Oxytricha trifallax]
Length = 599
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
ES CG C Y+ E P LPC HT CL CL +I + ++CP + I
Sbjct: 2 ESIFECGVCFKTYNHSEKKPLSLPCGHTFCLECLKQI-----NKHSIIKCPFDK----IA 52
Query: 88 RGGVAA-LPPSFLVNQLLDLMSR--------QRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
+A LP ++ V L + S+ Q++ C H ++++ FC++ +FC
Sbjct: 53 HHTIAENLPVNYAVLTALPMTSQSPGSGDSGQKQPNQAMCDIHKNKKIKFFCKSDQEMFC 112
Query: 138 LQCTGGSNHSSTSGDSEHTIIPFSIAI---KRMSEILLYKANECVSKNKVCPERKSNLRP 194
+C H+ +++H + P S I KR+ + +L + + N VC E L
Sbjct: 113 SKCV--LRHT----NAKHDVQPCSYKILDMKRLVKEMLEEVEQVDRNNNVCEELYGKLEQ 166
Query: 195 SAHK 198
K
Sbjct: 167 KVKK 170
>gi|341877854|gb|EGT33789.1| CBN-NHL-1 protein [Caenorhabditis brenneri]
Length = 976
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRY----KQPKLLPCQHTFCYPCLESCADTLHR---NLKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV A P++ + L++
Sbjct: 91 YDGVKAFQPNYTLTGFLEI 109
>gi|260812333|ref|XP_002600875.1| hypothetical protein BRAFLDRAFT_75840 [Branchiostoma floridae]
gi|229286165|gb|EEN56887.1| hypothetical protein BRAFLDRAFT_75840 [Branchiostoma floridae]
Length = 527
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 26/150 (17%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E ++ C C + PK+LPC HT C HCL Q + T+ CPICR+
Sbjct: 8 EKVSDDSTQCTICFYTFK----NPKVLPCLHTFCEHCLREWV--QKNDGDTIPCPICRQP 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL------------FCET 131
+++P+ GV L +F + L+ ++ + H ELL C
Sbjct: 62 VSLPQNGVEGLKDNFFIASLVKAVTEHNK------VRHGKDELLCTSCEEGKPATSRCSE 115
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C C C S H HT+ F
Sbjct: 116 CAEFLCESCE--SAHRLVRATRGHTLFTFE 143
>gi|443724901|gb|ELU12702.1| hypothetical protein CAPTEDRAFT_129838, partial [Capitella teleta]
Length = 192
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET-------GTLRC 77
+ + FL C C +Y PK L C HT C CL + ++ + + C
Sbjct: 10 EIYDQFLLCKICYEIY----KRPKTLICLHTFCSDCLEKHQDAEVERSYRYMLYSRAISC 65
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
PICR++ +P GGV LP +FLV+ L D+++R R
Sbjct: 66 PICRKKTELPSGGVCRLPDNFLVDNLTDVVNRSR 99
>gi|53127670|emb|CAG31164.1| hypothetical protein RCJMB04_2o16 [Gallus gallus]
Length = 238
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRSCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ IP G +LP +F + +++ ++ + CS H Q L ++C + C C
Sbjct: 61 SIVEIPASGTESLPINFALKAIIEKYRQEDHSDVATCSEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 TGGSNHSSTSGDSEHT 156
H+ D H+
Sbjct: 121 LTIGKHNGHPIDDLHS 136
>gi|50344922|ref|NP_001002133.1| uncharacterized protein LOC415223 [Danio rerio]
gi|47939401|gb|AAH71428.1| Zgc:86757 [Danio rerio]
Length = 345
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 19 EKQLSCPICLDMFT---KPVVILPCQHNLCRSCASELYDSKNPYHFSGGIFRCPTCRFEV 75
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ--------------RRHIIPKCSTHNSQEL-LFC 129
+ R GV L + LV ++D+ +Q + P C H +++ ++C
Sbjct: 76 VLDRHGVYGLQRNLLVENIIDIYKQQLEKGSNALEPPLKSKETKEPMCDVHEEEKINIYC 135
Query: 130 ETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVS 180
TC T C C H + ++ + + S LL +N C+
Sbjct: 136 VTCQTPTCSMCKVFGQHKDCEVSTLKSVYEVQKSELKNSIDLLGASNSCLQ 186
>gi|390350928|ref|XP_001196091.2| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like
[Strongylocentrotus purpuratus]
Length = 260
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PKLL C HT C CL + + LRCP+C+ + +P
Sbjct: 13 LECPVCLETFTD----PKLLHCLHTYCKTCLDNLLECHGNDQ-MLRCPVCKAETRVPNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQE-LLFCETCDTVFCLQCTGGSNHSST 149
V+ LP + + L++ M Q + C + E +++C+ C FC+ C HS
Sbjct: 68 VSKLPANRDLKSLIEDMENQYQ-FCTNCEFEDKPEAVVYCQDCGMYFCITCHNA--HSQW 124
Query: 150 SGDSEHTIIPFSIAIKRMSEILLYK 174
G H ++ S + I Y+
Sbjct: 125 PGFIRHEVLSMSEILSEKMSIRRYR 149
>gi|291222486|ref|XP_002731247.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 727
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ E FL+C CL Y PK+LPC HT C CL A + G L+C CR Q
Sbjct: 12 EEVTEDFLSCSICLENY----KNPKVLPCLHTFCQQCLESFKA---KSGGVLKCATCRIQ 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L + + LLD RQR+
Sbjct: 65 CDTP---IQKLKSNIFLTSLLDTFQRQRQ 90
>gi|47218749|emb|CAG02735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 89
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
C C C YD TPKLL C HT CL CL+RI + E TL CPICRE +P
Sbjct: 35 CAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSA-ELKTLSCPICREVTRLP 88
>gi|291240196|ref|XP_002740006.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 728
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y PK LPC HT C CL + + G LRC CR Q
Sbjct: 10 DEIGEDFLSCSICLEIY----KKPKALPCLHTFCEQCL---VTCKAKSEGVLRCAACRIQ 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD RQ++
Sbjct: 63 CDTP---IKDLKSNFFLTSLLDTFQRQKQ 88
>gi|156363300|ref|XP_001625983.1| predicted protein [Nematostella vectensis]
gi|156212842|gb|EDO33883.1| predicted protein [Nematostella vectensis]
Length = 187
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 63
Query: 88 RGGVAALPPSFLVNQL---LDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTG 142
V +L +F++N + L L++ + P C + +S E C CD C QC
Sbjct: 64 PADVPSLKVNFMINSIISVLPLLTSEDSKKKPVCESCDSGEPAQGRCNECDHFVCEQCI- 122
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
S H HTI+ IK + + KA+ C
Sbjct: 123 -SAHKRFRPVQHHTILSLD-EIKSGKLLAMSKASFC 156
>gi|270013854|gb|EFA10302.1| hypothetical protein TcasGA2_TC012517 [Tribolium castaneum]
Length = 2020
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ CL + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCLEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
P GV P + + + L+L ++ +C+ + + FC CD C
Sbjct: 58 PYQGVQGFPTNVTLQRFLELHIEITGELPDPTSGQVMERCNVCSEKAYCSFCSHCDKKIC 117
Query: 138 LQCTGG 143
+C G
Sbjct: 118 EECKGA 123
>gi|301613881|ref|XP_002936431.1| PREDICTED: RING finger protein 183-like [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 14 TLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRE 71
T + I+ + +S L C C YD TPKLL CSHT+CL C++R+ A+ ++
Sbjct: 5 TEIWHTQIDTAEDPDSRLECSICFTKYDNIFKTPKLLQCSHTLCLECVARLVAALPPEKQ 64
Query: 72 TGTLRCPICREQITIPRGGVAAL 94
+ CP CR+ IP G AL
Sbjct: 65 AEDVLCPFCRQPTHIPDDGAPAL 87
>gi|291243275|ref|XP_002741528.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 745
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ NE FL C CL Y PK+LPC HT C CL ++A + TL CP C +
Sbjct: 17 EINEDFLCCAICLERY----SDPKILPCQHTFCKKCLVQLAEKGVAD--TLMCPTCNRSV 70
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD-TVFCLQC 140
+P + L +F ++ LLD + + PK FCE + T C++C
Sbjct: 71 KVP---INDLQSNFFMSSLLDKIPEKLVAGTPKVCE-------FCEENEVTSICVEC 117
>gi|308498277|ref|XP_003111325.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
gi|308240873|gb|EFO84825.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
Length = 330
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT--------LRCPICREQ 83
TC CL YDG HTPK+L C+HTVC C++ + R T + CP+CR +
Sbjct: 18 TCQVCLEPYDGKRHTPKILQCAHTVCESCINVLEEQSRRRYNTGLDPTIVSISCPVCRTE 77
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVF------- 136
PR A + ++ + ++D M ++ H I + C C+ V+
Sbjct: 78 TKTPR---ACIRTNYQLIDVVDGMCKEATHNIA---------FVNCIECEGVYHEKDVNI 125
Query: 137 CLQCTGGSNHSSTSGDSEHTI 157
C QC+ + ++T+ E ++
Sbjct: 126 CTQCSPINEDTNTNELVERSV 146
>gi|291242104|ref|XP_002740948.1| PREDICTED: MGC82029 protein-like [Saccoglossus kowalevskii]
Length = 345
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
+ T S + FLTC C Y PKLL C H+ C CL R S +
Sbjct: 1 MASTASALANQLRDEFLTCSLCFSSY----KNPKLLSCQHSFCRECLDRWIVSS--KVKL 54
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLM 107
L CP+CR++ IP G S L+ LL+ +
Sbjct: 55 LACPVCRKESVIPVNGAIGFSASILITNLLEYL 87
>gi|224080039|ref|XP_002187930.1| PREDICTED: RING finger protein 223 [Taeniopygia guttata]
Length = 328
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
S + C C YD TPKLL CSH CL C++R++A+ L CP CR+ +PR
Sbjct: 88 SPVECSICFTSYDNSFKTPKLLQCSHVFCLECVARLSAALAAGQEALPCPFCRQPTCLPR 147
Query: 89 GGVAALPPSF-LVNQLLDLMSRQRRHIIPK---CSTHNSQELLFCETCDTVFCLQCTGGS 144
G L S L+ L + R+R+ + C S + ++CD++ S
Sbjct: 148 QGAPGLATSRELLATLPPELQRERQLWMDGTRLCCRRASADAENPDSCDSIDVAMAKAES 207
Query: 145 NHSSTSG 151
+ +G
Sbjct: 208 AEVAPAG 214
>gi|405970482|gb|EKC35381.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 442
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 29 SFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+FL+C C+ EH PK LPC HT C CL S+ G CPICR+ + I
Sbjct: 13 TFLSCSICM------EHFKKPKALPCLHTFCEDCLRDYIVSRFESAGQFPCPICRQLVYI 66
Query: 87 PRGGVAALPPSFLVNQLLDLMS 108
P GV P + + L D ++
Sbjct: 67 PPNGVYGFPDNHFILSLQDTVT 88
>gi|156358733|ref|XP_001624670.1| predicted protein [Nematostella vectensis]
gi|156211463|gb|EDO32570.1| predicted protein [Nematostella vectensis]
Length = 313
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQITI 86
E +TC C+ ++ P++LPC H+ C HCL +A S+ R G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAVHSEGR--GKLVCPLCKAEFQI 63
Query: 87 PRGGVAALPPSFLVNQLLD---LMSRQRRHIIPKCSTHNSQE--LLFCETCDTVFCLQCT 141
V +L +F++N ++ L++ + P C + +S E C CD C QC
Sbjct: 64 SPADVPSLKVNFMINSIISVLPLLTSEDSKKKPACESCDSGEPAQGRCNECDHFVCEQCI 123
Query: 142 GG 143
Sbjct: 124 SA 125
>gi|345306794|ref|XP_001511947.2| PREDICTED: tripartite motif-containing protein 55 [Ornithorhynchus
anatinus]
Length = 603
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +R+
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSMCKVFGAHKD 155
>gi|156353437|ref|XP_001623072.1| predicted protein [Nematostella vectensis]
gi|156209727|gb|EDO30972.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQL---LDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTG 142
V +L +F++N + L L++ P C + +S E C CD C QC
Sbjct: 65 PADVPSLKVNFMINSIISVLPLLTSDDSKKKPACESCDSGEPAQGRCNECDHFVCEQCI- 123
Query: 143 GSNHSSTSGDSEHTII 158
S H + HTI+
Sbjct: 124 -SAHKNIKTLQHHTIL 138
>gi|390365179|ref|XP_003730766.1| PREDICTED: uncharacterized protein LOC100891998 [Strongylocentrotus
purpuratus]
Length = 633
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C CL ++D +L C HT C CL R A+ R+ + CP+CR+ + +
Sbjct: 13 ILCPLCLDVFDNA----SMLICGHTFCKQCLERYDAAH-RDLDHMVCPLCRKVTKLDKSR 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHII------PKCSTHNSQELL--FCETCDTVFCLQC 140
VA LP +F VN L+D + I PKC+ QE FC C C +C
Sbjct: 68 VAGLPTNFTVNGLVDEYHSSQGGINAVLEDRPKCTACELQEDAESFCYECGNYMCAKC 125
>gi|395511077|ref|XP_003759788.1| PREDICTED: tripartite motif-containing protein 55 [Sarcophilus
harrisii]
Length = 518
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 29/155 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDTLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +R+
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNH 146
P C H + + ++C C+ C C H
Sbjct: 119 SEQPMCEEHEDERINIYCLNCEVPTCSMCKVFGAH 153
>gi|156360812|ref|XP_001625218.1| predicted protein [Nematostella vectensis]
gi|156212040|gb|EDO33118.1| predicted protein [Nematostella vectensis]
Length = 374
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 15/108 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQITI 86
E +TC C+ ++ P++LPC H+ C HCL +A S+ R G L CP+C+ + I
Sbjct: 15 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAVHSEGR--GKLVCPLCKAEFQI 68
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
V +L +F++N ++ ++P ++ +S++ C+ CD+
Sbjct: 69 SPADVLSLKVNFMINSIIS--------VLPLLTSEDSKKKTVCQMCDS 108
>gi|443698497|gb|ELT98473.1| hypothetical protein CAPTEDRAFT_177644 [Capitella teleta]
Length = 576
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGTLRCPICRE 82
E + LTC C YD E PK+LPC HT C C++R + R++G L CP CRE
Sbjct: 8 ERVGDELLTCSIC---YDHYEQ-PKVLPCLHTYCQKCIARHYEVHRLRQSGQLSCPSCRE 63
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMS 108
I P GG+AA V + +L+
Sbjct: 64 LIKPPPGGIAAFRNDGAVKRTEELLK 89
>gi|260794836|ref|XP_002592413.1| hypothetical protein BRAFLDRAFT_67279 [Branchiostoma floridae]
gi|229277632|gb|EEN48424.1| hypothetical protein BRAFLDRAFT_67279 [Branchiostoma floridae]
Length = 339
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS-RIAASQTRETGTLRCPICREQITIPRG 89
L+C CL ++ PKLLPC HT C CL SQ L+CP C+ Q+++P
Sbjct: 18 LSCSICLELFT----RPKLLPCGHTFCQDCLQVYFCESQDH----LKCPNCQLQVSLPPE 69
Query: 90 GVAALPPSFLVNQLLDLMSR----QRRHIIP--KCSTHNSQEL-LFCETCDTVFCLQCTG 142
GV LP + + + +S+ + P KCS H S++ L+C CD C C
Sbjct: 70 GVTGLPENHSAAKFCEKLSKTDANADKQAKPRNKCSQHPSEDYQLYCTQCDVPVCYVCLE 129
Query: 143 GSN--HSSTS 150
++ HS TS
Sbjct: 130 ETHDGHSMTS 139
>gi|156363314|ref|XP_001625990.1| predicted protein [Nematostella vectensis]
gi|156212849|gb|EDO33890.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQITI 86
E +TC C+ ++ P++LPC H+ C HCL +A S+ R G L CP+C+ + I
Sbjct: 9 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAVHSEGR--GKLVCPLCKAEFQI 62
Query: 87 PRGGVAALPPSFLVNQLLD---LMSRQRRHIIPKCSTHNSQE--LLFCETCDTVFCLQCT 141
V +L +F++N ++ L++ + P C + +S E C CD C QC
Sbjct: 63 SPADVPSLKVNFMINSIISVLPLLTSEDSKKKPSCESCDSGEPAQGRCNECDHFVCEQCI 122
Query: 142 GG 143
Sbjct: 123 SA 124
>gi|156352341|ref|XP_001622716.1| predicted protein [Nematostella vectensis]
gi|156209316|gb|EDO30616.1| predicted protein [Nematostella vectensis]
Length = 320
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 15/108 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQITI 86
E +TC C+ ++ P++LPC H+ C HCL +A S+ R G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAVHSEGR--GKLVCPLCKAEFQI 63
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
V++L +F++N ++ ++P ++ +S++ C+ CD+
Sbjct: 64 SPADVSSLKVNFMINSIIS--------VLPLLTSEDSKKKTVCQMCDS 103
>gi|156352339|ref|XP_001622715.1| predicted protein [Nematostella vectensis]
gi|156209315|gb|EDO30615.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQL---LDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTG 142
V +L +F++N + L L++ + P C + +S E C CD C QC
Sbjct: 65 PADVPSLKVNFMINSIISVLPLLTSEDSKKKPVCESCDSGEPAQGRCNECDHFVCEQCI- 123
Query: 143 GSNHSSTSGDSEHTII 158
S H + HTI+
Sbjct: 124 -SAHKNIKTLQHHTIL 138
>gi|60459910|gb|AAX20126.1| tripartite motif protein L-TRIM [Lymnaea stagnalis]
Length = 816
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ D N + L+C C Y PK+LPC HT C CLS + S E+ ++ CP+CR+
Sbjct: 13 FWDSNINLLSCAICDQRY----KDPKVLPCLHTFCELCLSNVIPS---ESLSVTCPVCRQ 65
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCT 141
Q +P GV+AL + V LL+ ++ + C +S+ C C C C+
Sbjct: 66 QSILPLDGVSALQTNGFVLNLLNAITSP--DVCTSCGVISSRPTSKCLDCQKFLCDTCS 122
>gi|260791770|ref|XP_002590901.1| hypothetical protein BRAFLDRAFT_250581 [Branchiostoma floridae]
gi|229276099|gb|EEN46912.1| hypothetical protein BRAFLDRAFT_250581 [Branchiostoma floridae]
Length = 589
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 22/180 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---AASQTRETGTLRCPICREQI 84
E L+C CL M++ LLPC H +C HC I R G+ +CP CR+QI
Sbjct: 5 ERDLSCPVCLEMFN---KPVLLLPCQHNLCRHCAEDILTNMGGWARYGGSFKCPTCRDQI 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--------CSTHNSQEL-LFCETCDTV 135
T+ R G+ L + LV +++ + I C H + + L+C T +
Sbjct: 62 TLGRQGLDGLKRNILVETIIESYRVAQSAGIKTAPPGGGAYCRDHKDERVNLYCVTDERP 121
Query: 136 FCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPS 195
C C G ++ +H II K E + + N KN + S+++ +
Sbjct: 122 ICGLCVIGQHN-------QHNIIELQTIFKEKKEKIETEMNRLQQKNSDMSKEMSDIQAT 174
>gi|291221599|ref|XP_002730807.1| PREDICTED: tripartite motif protein 2-like, partial [Saccoglossus
kowalevskii]
Length = 686
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 22/126 (17%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
Y +E FL C C + PK+LPC H+ C CL R+ ++ T+ CP+CR
Sbjct: 10 YSQISEEFLLCQICFEAF----TKPKVLPCLHSFCEMCLMRVVPKGSQ---TIPCPMCRC 62
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETC-------DTV 135
+ +P GVA L +F + L D + ++ N FC C T
Sbjct: 63 ETLLPENGVAGLKDNFFILNLSDAFTSRKE--------DNQNRKAFCTVCPGSGPAEATS 114
Query: 136 FCLQCT 141
CL+C
Sbjct: 115 RCLECV 120
>gi|390363179|ref|XP_003730311.1| PREDICTED: transcription intermediary factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK+L CSH+ C CL + + + LRCP+CR + +P V+ LP + + L++
Sbjct: 25 PKILSCSHSYCKTCLDNLLKCHSNDQ-VLRCPVCRAETQVPNQDVSKLPANLALKSLIED 83
Query: 107 MSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
+ Q + S Q +++C+ C C+ C + HS H ++ S
Sbjct: 84 VKNQHQFCTNCESEDKPQAVVYCQDCGLCLCITC--HNKHSQWPDFISHEVLAMS 136
>gi|260785672|ref|XP_002587884.1| hypothetical protein BRAFLDRAFT_87271 [Branchiostoma floridae]
gi|229273039|gb|EEN43895.1| hypothetical protein BRAFLDRAFT_87271 [Branchiostoma floridae]
Length = 171
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C CL +A+ + LRCP CR+Q+ +P G
Sbjct: 16 LTCSICLELFT----RPKMLPCQHTFCQDCLQDLASRKV----PLRCPNCRQQVRLPPQG 67
Query: 91 VAALPPSFLVNQLLDLMSRQ 110
VA LP + + + + + Q
Sbjct: 68 VAGLPDNLMAANMCERLQNQ 87
>gi|390347956|ref|XP_003726902.1| PREDICTED: uncharacterized protein LOC100890183 [Strongylocentrotus
purpuratus]
Length = 598
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E + C C +++ P+ L C HT C CL R+A ++ CP+CR++ ++P
Sbjct: 10 EREIECSICQDLFE----DPRCLSCFHTFCFECLQRLAEGDR----SVLCPLCRKKTSLP 61
Query: 88 RGGVAALPPSFLVNQLLDLMSR---QRRHIIPKCSTHNSQEL--LFCETCDTVFCLQCTG 142
G L + L +++L+ R + + + S H+ ++ C++C + C C G
Sbjct: 62 NDGAMGLTKNNLAQIMVELIKRNGSEDKQTLTCQSEHDIRQRAEFICQSCKIIICGSC-G 120
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSE----ILLYKANE 177
++H ++H P +K+M E +L + NE
Sbjct: 121 MTHHRDP---TQHQTFPIDEKLKQMEEDLRDLLEWGKNE 156
>gi|156364546|ref|XP_001626408.1| predicted protein [Nematostella vectensis]
gi|156213283|gb|EDO34308.1| predicted protein [Nematostella vectensis]
Length = 754
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E N+ L C CL P+LL C HT C C+ RI S + +L CP CR++
Sbjct: 9 EQINDQ-LVCAICLDRL----VEPRLLICMHTFCTPCIQRI--SNNDASASLTCPTCRKE 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCST-------HNSQELLF----CETC 132
IP GV +L +F VNQ+LD++ + + + N++E C C
Sbjct: 62 TPIPETGVESLHLNFFVNQMLDVVRHKADELKKEIRETRRCEGCENNEEADVATSRCVDC 121
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
+ C C ++H +H +I S
Sbjct: 122 NKPLCTTCV--ADHKRVHATLDHRVIAIS 148
>gi|115497842|ref|NP_001070136.1| uncharacterized protein LOC767730 [Danio rerio]
gi|115313089|gb|AAI24314.1| Zgc:153310 [Danio rerio]
Length = 316
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
C C C +D TPKLL C HT CL CL+RI + + E TL CPICRE I G
Sbjct: 107 CIVCFCNFDNVFKTPKLLSCGHTFCLECLARINVN-SPEIKTLTCPICREVTEIRHG 162
>gi|315585390|gb|ADU34198.1| MuRF1c [Salmo salar]
Length = 353
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 26/176 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
ES L+C CL M+ + +LPC H +C C S + S+ G RCP CR ++
Sbjct: 19 ESQLSCPICLEMF---QKPVVILPCQHNLCRGCASDLYDSRNPYHYSGGIFRCPTCRFEV 75
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR----HII---------------PKCSTHNSQE 125
+ R GV L + LV ++ + +Q ++ P C+ H +
Sbjct: 76 VLDRHGVYGLQRNLLVENIIGIYKQQTESGGGEVVGNVADPPMKDKDTKEPMCTEHEDER 135
Query: 126 L-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVS 180
+ ++C TC T C C H +I A R + LL N CV
Sbjct: 136 INIYCVTCQTPTCSMCKVFGQHKDCEVSPLQSIYDTQKAELRNAVDLLAAGNSCVQ 191
>gi|431891235|gb|ELK02112.1| E3 ubiquitin-protein ligase TRIM63 [Pteropus alecto]
Length = 405
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C S I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAANPYWTNRGSSMSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TCD C C H +
Sbjct: 135 LTCDMPTCSMCKVFGAHKA 153
>gi|390367870|ref|XP_003731345.1| PREDICTED: uncharacterized protein LOC100890954 [Strongylocentrotus
purpuratus]
Length = 621
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
++ N + + L C CL + PK+L CSHT C CL Q E L CP
Sbjct: 1 MAANLKQVVDQNLECPVCLSFF----KEPKILTCSHTFCKGCLQSFLDFQPDEQ-KLSCP 55
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQE----LLFCETCDT 134
+CR++ + G V+ L + V L++ + Q + CS +S++ +++C+ C
Sbjct: 56 VCRKETVVTDGEVSRLQTNLTVRALVEDVQTQ----VQVCSNCDSEDKALAVVYCKDCGD 111
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C C HS + S H+I+ S
Sbjct: 112 YLCESCK--KMHSKWAKFSGHSIVAAS 136
>gi|148237928|ref|NP_001091169.1| uncharacterized protein LOC100036929 [Xenopus laevis]
gi|120538076|gb|AAI29679.1| LOC100036929 protein [Xenopus laevis]
Length = 498
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLQYKSFSKEQQTM---DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCASDI 54
Query: 65 -AASQT----------RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
AS T G RCP CR ++ + R GV L + LV ++DL +
Sbjct: 55 FQASNTYLPTRGGNTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDLYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+R+ P C H +++ ++C C+ C C
Sbjct: 115 PERKTDQPMCDEHEDEKINIYCLNCEVPTCSMC 147
>gi|402861073|ref|XP_003894932.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Papio
anubis]
Length = 611
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 20 SINYEDFN-ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---- 74
IN E N E LTC C +++ P++LPCSHT C +CL I + +G
Sbjct: 204 EINKEMHNFEEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIW 255
Query: 75 ------LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-L 127
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L +
Sbjct: 256 RPLRIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNV 315
Query: 128 FCETCDTVFCLQC-TGGSNHSSTSGD 152
+C + C C T G +H D
Sbjct: 316 YCLLDKKLVCGHCLTIGQHHGHPIDD 341
>gi|405978569|gb|EKC42949.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 637
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCL-SRIAASQTRETGTLRCPICREQITIPRGGV 91
CG CL G PK+LPC HT CL CL S + + RET T CP+C + IPRGGV
Sbjct: 18 CGICL----GDFKKPKILPCFHTFCLDCLRSYVGKTGRRETFT--CPLCLVETEIPRGGV 71
Query: 92 AALPPSFLVNQLLDLMSRQRRHIIPKCSTHNS----QELLFCETCDTVFCLQCTGGSNHS 147
+F + ++ + KC ++ Q C CD C C+ H
Sbjct: 72 EHFQTNFYIKA---EQTKSLSKLDAKCEVCDTDGKRQVETRCLECDQNLCENCS--KTHL 126
Query: 148 STSGDSEHTIIPFSI 162
+ EH ++ +
Sbjct: 127 KMTSSKEHHLMAVNF 141
>gi|260817090|ref|XP_002603420.1| hypothetical protein BRAFLDRAFT_222555 [Branchiostoma floridae]
gi|229288739|gb|EEN59431.1| hypothetical protein BRAFLDRAFT_222555 [Branchiostoma floridae]
Length = 86
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL + Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLEELLKKQKVKT-ELDCPTCRSKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLD 105
+P GGVA L +F V L D
Sbjct: 65 LPGGGVAGLKDNFFVESLKD 84
>gi|260828347|ref|XP_002609125.1| hypothetical protein BRAFLDRAFT_91103 [Branchiostoma floridae]
gi|229294479|gb|EEN65135.1| hypothetical protein BRAFLDRAFT_91103 [Branchiostoma floridae]
Length = 690
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S + D ++FL C C +Y PKLLPC HT C CL R A+ + + CP+
Sbjct: 11 SFHVWDTKDNFLVCKLCSEIY----CNPKLLPCLHTFCEDCLERFASV---DVDIVECPV 63
Query: 80 CREQITIPRGGVAALPPSFLVNQLL------DLMSRQRRHIIPKCSTHNSQELL---FCE 130
CR TIP GVA + V L D +R R C S E+L C
Sbjct: 64 CRVNHTIPDLGVAGFEDNGFVASLCKTLSANDADTRDREVPCSVCGDDESGEVLSVSHCI 123
Query: 131 TCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKS 190
C C C H T H ++ +SE+L K +K K+ RK
Sbjct: 124 ECGDNLCPDCAFA--HPRTKFTRGHHVVS-------LSELLFVK-----NKGKLDERRKE 169
>gi|321471277|gb|EFX82250.1| hypothetical protein DAPPUDRAFT_316926 [Daphnia pulex]
Length = 365
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + F+TCG C Y PK LPCSHT+CL CL I E G++ CP CR
Sbjct: 9 DAGDDFVTCGVCFNEYHEETKKPKSLPCSHTICLSCLREIF-----EDGSISCPFCRNVS 63
Query: 85 TIPR-GGVAALPPSFLVNQLLDLMSRQRRHIIPKC 118
V LP +F +L L + +C
Sbjct: 64 NYASLELVETLPTNFSALHILKLNKEITKFEFEQC 98
>gi|440586601|emb|CCK33022.1| NHL domain protein Brain Tumour [Platynereis dumerilii]
Length = 750
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 6 SSTLSTNSTLVETVSINYEDFNESFLT-CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
S TLST T+ T + + D S T C C Y PK+LPC HT C CL +I
Sbjct: 3 SPTLSTTDTMSLTSNSSEGDIENSLNTKCSLCNETYS----IPKVLPCFHTFCQPCLEKI 58
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
+ + L CP C ++ + G+AA PP F VN +L+
Sbjct: 59 IETPDK----LSCPECHQETFLTSAGIAAFPPDFAVNNVLE 95
>gi|334328733|ref|XP_003341114.1| PREDICTED: RING finger protein 183-like [Monodelphis domestica]
Length = 246
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 24 EDFNE---SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETGTLRCP 78
ED +E S L C C YD TPK+L C+H CL CL+R+ A+Q + ++ CP
Sbjct: 38 EDGSEKVSSPLECSICFTGYDNIFKTPKVLSCTHVFCLECLARLMAAQPAGQSDDSVPCP 97
Query: 79 ICREQITIPRGGVAAL 94
+CR+ +P G AL
Sbjct: 98 LCRQPTPVPLAGAPAL 113
>gi|260817096|ref|XP_002603423.1| hypothetical protein BRAFLDRAFT_222673 [Branchiostoma floridae]
gi|229288742|gb|EEN59434.1| hypothetical protein BRAFLDRAFT_222673 [Branchiostoma floridae]
Length = 86
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
+E FL C CL Y PK+L C H+ C CL + Q +T L CP CR +
Sbjct: 10 LSEDFLECQICLQPY----RRPKVLSCLHSFCQQCLKELLKKQKVKT-ELDCPTCRRKTL 64
Query: 86 IPRGGVAALPPSFLVNQLLD 105
+P GGVA L +F V L D
Sbjct: 65 LPGGGVAELKDNFFVESLKD 84
>gi|260833364|ref|XP_002611627.1| hypothetical protein BRAFLDRAFT_63709 [Branchiostoma floridae]
gi|229296998|gb|EEN67637.1| hypothetical protein BRAFLDRAFT_63709 [Branchiostoma floridae]
Length = 685
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L CG C Y P++L C HT CL CL + Q RE G + CP+C+++ +P
Sbjct: 3 LQCGLCGQQYS----RPRVLSCLHTFCLACLESLMKRQDRE-GEVCCPVCQQRTLLPSSD 57
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGG 143
+ LP +++ LL++ S + + NS + C C C C G
Sbjct: 58 PSTLPSDPIIDALLEVKSVEAGAVTCTSCEENSSAVCRCLDCAAFLCRNCQGA 110
>gi|341902414|gb|EGT58349.1| hypothetical protein CAEBREN_14761 [Caenorhabditis brenneri]
Length = 152
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 31 LTCGTCLCMYDG--GEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
L C CL Y +P++L C HTVC C+ + ASQ +RCP C+++ +P
Sbjct: 66 LKCNVCLLKYSATSKNRSPRILTNCGHTVCFGCIKNLTASQK----VVRCPFCKKRTNLP 121
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHI 114
G V L ++ + L++ M+R++ I
Sbjct: 122 NGAVNKLRKNYAIIGLVEEMNREKNEI 148
>gi|390356321|ref|XP_003728755.1| PREDICTED: uncharacterized protein LOC100892572 [Strongylocentrotus
purpuratus]
Length = 629
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA--SQTRETGTLRCPICREQITIPR 88
L C CL + PK L CSHT C CL + A SQT +L CPICR +
Sbjct: 12 LECSICLELL----SDPKQLSCSHTFCKRCLDNMLACSSQTETVNSLTCPICRSVTDVKH 67
Query: 89 GGVAALPPSFLVNQLL-DLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
G V L + + L+ DL + Q+ C T S+ + FC+ C C +C NH+
Sbjct: 68 GDVMNLNANVPLKALVEDLRNSQQLCDCEVCQT-GSKAVHFCQECGKNVCNECL--ENHN 124
Query: 148 STSGDSEHTII 158
+ +HT++
Sbjct: 125 KWPPNLKHTVV 135
>gi|327269785|ref|XP_003219673.1| PREDICTED: tripartite motif-containing protein 55-like [Anolis
carolinensis]
Length = 533
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 31/159 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQETMDNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-------Q 110
+ G RCP CR ++ + R GV L + LV ++D+ + +
Sbjct: 59 NPYLPMRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESASCRPE 118
Query: 111 RRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
R+ P C H +++ ++C C+ C C H
Sbjct: 119 RKPEQPMCEEHEDEKINIYCLNCEVPTCSMCKVFGAHKD 157
>gi|432891851|ref|XP_004075679.1| PREDICTED: tripartite motif-containing protein 59-like [Oryzias
latipes]
Length = 420
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
D E LTC C ++ P++LPCSHT C CL + T + ++CP
Sbjct: 2 DSLEEDLTCSVCYQLFSD----PRVLPCSHTFCQPCLENLLQVSTNYSIWRPLRLPIKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR + +P GV ALP + + +++ R P C H Q L ++C + C
Sbjct: 58 NCRSVVELPPAGVDALPSNVSLRAIIEKYQRDEEPRPPSCQEHPRQPLNMYCIQDRQLIC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GLCLTVGQHHGHPIDD 133
>gi|291242383|ref|XP_002741087.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 662
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 13 STLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET 72
ST + S + +E LTC CL Y PK+LPC H+ C CL+++ +Q
Sbjct: 6 STSIPKYSFLGDKIDEDLLTCPVCLKRY----KNPKILPCHHSFCEQCLAQLKGTQD--- 58
Query: 73 GTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
T+ CP CR+ ++ + L PS ++N ++D++ Q R
Sbjct: 59 -TIECPNCRQCHSVST--IQYLRPSTIINSVIDIIEEQER 95
>gi|326917700|ref|XP_003205134.1| PREDICTED: tripartite motif-containing protein 55-like isoform 2
[Meleagris gallopavo]
Length = 450
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 23/163 (14%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
L MS++L S E ++ D E L C CL M+ +LPC H +C C S
Sbjct: 6 LGMSTSLGYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCAS 59
Query: 63 RI-----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-- 109
I + G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 60 DIFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES 119
Query: 110 ---QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
+R+ +P C H + + ++C C+ C C H
Sbjct: 120 TRPERKCDLPMCEEHEDERINIYCLNCEIPTCSLCKVFGAHKD 162
>gi|301622578|ref|XP_002940607.1| PREDICTED: tripartite motif-containing protein 55-like [Xenopus
(Silurana) tropicalis]
Length = 497
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 107/287 (37%), Gaps = 41/287 (14%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLQYKSFSKEQQTM---DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGNTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRM 167
+R+ P C H +++ ++C C+ C C H + + P + +R
Sbjct: 115 PERKTDCPMCDEHEDEKINIYCLNCEVPTCSMCKVFGAHKTCE------VAPLTQVFQRQ 168
Query: 168 SEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRRRGAHTQTPPLFSHGLSPLSLPD 227
L V N S L S + +R+ Q F + + L
Sbjct: 169 KSELSDGIAILVGCNDRIQAVVSQLEESCKTVEENSKRQ--KEQLCEKFDYLYAILEERK 226
Query: 228 SSHALLITR---------RAYVRRRGAHTQT-PPLFSHGLSPLSLPD 264
+ITR R+ +R+ G+H +T L G+ + P+
Sbjct: 227 GELTQIITRDQEERLEYVRSLMRKYGSHMETVSKLVETGIQFMEEPE 273
>gi|326917698|ref|XP_003205133.1| PREDICTED: tripartite motif-containing protein 55-like isoform 1
[Meleagris gallopavo]
Length = 414
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 23/163 (14%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
L MS++L S E ++ D E L C CL M+ +LPC H +C C S
Sbjct: 6 LGMSTSLGYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCAS 59
Query: 63 RI-----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-- 109
I + G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 60 DIFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES 119
Query: 110 ---QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
+R+ +P C H + + ++C C+ C C H
Sbjct: 120 TRPERKCDLPMCEEHEDERINIYCLNCEIPTCSLCKVFGAHKD 162
>gi|291224862|ref|XP_002732421.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 473
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ +E FLTC C PK+L C H+ C CL AA CP+CR
Sbjct: 13 DKIDEDFLTCSICQERI----TNPKILDCLHSFCARCLKDYAAKNPIFKANPSCPVCRMS 68
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR---HIIPKC----STHNSQELLFCETCDTVF 136
+P GV L +F V+++ + R+ C S S L +C C
Sbjct: 69 FRLPESGVDGLKNNFFVSEICKVFESYRKTRGESKVNCFSCESEGTSLTLSYCLQCSEFL 128
Query: 137 CLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK---VCPERKSNL 192
C +C+ ++H+ EH ++ + LL K N S++K +C + K+ L
Sbjct: 129 CRECS--NHHTKMKSTKEHQVLS--------GDDLLSKRNWVESRSKSTSLCRKHKTEL 177
>gi|334325510|ref|XP_001379096.2| PREDICTED: tripartite motif-containing protein 55 [Monodelphis
domestica]
Length = 557
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 23/153 (15%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L+ S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLNYKSLSKEQQTM---DTLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+R+ P C H + + ++C C+ C C
Sbjct: 115 PERKSEQPMCEEHEDERINIYCLNCEVPTCSMC 147
>gi|156403933|ref|XP_001640162.1| predicted protein [Nematostella vectensis]
gi|156227295|gb|EDO48099.1| predicted protein [Nematostella vectensis]
Length = 564
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C YD PK LPC HT+CL CL + ++CPI +++ +P GG
Sbjct: 20 LVCPICEEEYD----DPKRLPCMHTICLGCLESMVPKNAL---IMKCPIDEQELPMPMGG 72
Query: 91 VAALPPSFLVNQLLDLMS-------RQRRHIIPKCSTHNSQE 125
+ ALP + +LL++ S ++RR + K +N ++
Sbjct: 73 INALPSDLRIVRLLEVASGGQTKSKKKRRSLSAKSLENNEKQ 114
>gi|444517349|gb|ELV11510.1| Midline-1 [Tupaia chinensis]
Length = 635
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL ++D P LLPC+H++C +C RI A ++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFDD----PLLLPCAHSLCFNCAHRILVSHCATNEAVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|125836979|ref|XP_001345555.1| PREDICTED: tripartite motif-containing protein 59-like [Danio
rerio]
Length = 344
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
D E LTC C ++ P++LPCSHT C CL + + L+CP
Sbjct: 2 DSLEEDLTCSVCYALFTD----PRVLPCSHTFCKSCLESVLQVSVNFSIWRPLRLPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR + +P G+ ALP + + +++ R+ R P C H Q L ++C + C
Sbjct: 58 NCRSVVELPTNGLDALPVNVCLRAIVEKYQRESRPRSPSCPEHPGQPLNVYCVQDRKLIC 117
Query: 138 LQCTGGSNHSSTSGDSEHT 156
C H D T
Sbjct: 118 GFCLTIGQHQGHKIDDLQT 136
>gi|390342663|ref|XP_003725710.1| PREDICTED: tripartite motif-containing protein 45-like
[Strongylocentrotus purpuratus]
Length = 653
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C ++ + + L C H+ C C+ R A++ +++ T+ CPICR T+P GV
Sbjct: 19 CSICWQKFE----SARFLACFHSFCELCIERCASTSSKQN-TVVCPICRHCTTLPEVGVR 73
Query: 93 ALPPSFLVNQLLD------LMSRQRRHIIPKCSTHNSQELL---FCETCDTVFCLQCT 141
LP +F++N+++D + + + C +E + FC C + C +C
Sbjct: 74 GLPLNFIMNRMVDAFEEFEAYEEKLKSVDAMCDWCGDEEAVATSFCHDCSNILCKECV 131
>gi|348588735|ref|XP_003480120.1| PREDICTED: tripartite motif-containing protein 55-like isoform 1
[Cavia porcellus]
Length = 542
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|441671671|ref|XP_004092289.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 223 [Nomascus
leucogenys]
Length = 178
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+ T
Sbjct: 46 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTT 105
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 106 VPPAGAPAL 114
>gi|405966108|gb|EKC31428.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 753
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
N +F C C +D P +L C HT C CL RI + + + CP C Q I
Sbjct: 3 NTAFTNCIQCHNEFDESRRHPHVLSCLHTCCSSCLERIVSGK-----QIFCPDCHSQTEI 57
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCST--HNSQELLFCETCDTVFCLQCTGGS 144
LP LD + QR+ +C+ S FC+ C T C +CT
Sbjct: 58 SSDPCKELPLDTACRNYLDFVRIQRKPTDIQCTDCPDQSSASSFCKECFTFMCPECTTA- 116
Query: 145 NHSSTSGDSEHTIIPFS 161
H T+ +H ++P S
Sbjct: 117 -HKRTAITRKHLVVPVS 132
>gi|344273127|ref|XP_003408378.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Loxodonta africana]
Length = 538
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPIRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|334085187|ref|NP_001207428.1| RING finger protein 223 [Mus musculus]
Length = 255
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L CSH CL CL+R+AA+Q RE + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCSHVFCLECLARLAAAQPAGRSGRE--AVPCPFCRQP 104
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 105 TTVPVAGAPAL 115
>gi|260821428|ref|XP_002606035.1| hypothetical protein BRAFLDRAFT_239729 [Branchiostoma floridae]
gi|229291372|gb|EEN62045.1| hypothetical protein BRAFLDRAFT_239729 [Branchiostoma floridae]
Length = 681
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC C + PK LPC HT C CL + + T CP C +P
Sbjct: 13 EHILTCAICRGRF----LKPKELPCLHTFCRDCLEQHVGGKN----TFSCPSCHRVTDVP 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPK------------CSTHNSQEL-LFCETCDT 134
GV + +N L++ R+RR + C TH Q + +C TC+
Sbjct: 65 GTGVDGFLNNRHINSLIETKKRERRQETCQVLEGVKLRDATPCPTHKDQVVTAYCNTCEA 124
Query: 135 VFCLQCT 141
+ CL+CT
Sbjct: 125 LLCLRCT 131
>gi|260825383|ref|XP_002607646.1| hypothetical protein BRAFLDRAFT_84665 [Branchiostoma floridae]
gi|229292994|gb|EEN63656.1| hypothetical protein BRAFLDRAFT_84665 [Branchiostoma floridae]
Length = 636
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS------QTRETGTLRCPI 79
F E +LTC CL Y + + LPC H CL CL +T + C I
Sbjct: 17 FLERYLTCTICLEPY---KMNIEALPCKHIFCLGCLEGQHNKWLEDCRRTPDQEPFGCSI 73
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQEL-LFCETCDTVF 136
C+ T+P GVA LP + LV L + S++ + K C H+ +++ LFC+ C+
Sbjct: 74 CQTPATLPSKGVAGLPDNHLVANLCEEFSKKTQVGGQKNRCVFHSKKDVGLFCQQCEIPV 133
Query: 137 CLQCT 141
C +CT
Sbjct: 134 CGECT 138
>gi|260826193|ref|XP_002608050.1| hypothetical protein BRAFLDRAFT_74999 [Branchiostoma floridae]
gi|229293400|gb|EEN64060.1| hypothetical protein BRAFLDRAFT_74999 [Branchiostoma floridae]
Length = 585
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCS--HTVCLHCLSRIAASQTRETGTLRCPICREQ 83
F + L+CG C + PK++PC H+ C HCL + A +Q RCP CR+
Sbjct: 14 FIQEELSCGICHELLT----RPKVVPCKGKHSFCQHCLEKWATTQQ----PFRCPTCRQP 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK----CSTHNSQEL-LFCETCDTVFCL 138
+P GV +LP ++++L + R + + CS H+ +E +FC+ C C
Sbjct: 66 ANLPAKGVPSLPD--CDRRIVNLCDQLRNQGVSELNYCCSVHDDEEFRVFCKQCKVPVCE 123
Query: 139 QC 140
C
Sbjct: 124 TC 125
>gi|291388056|ref|XP_002710490.1| PREDICTED: tripartite motif-containing 55 isoform 1 [Oryctolagus
cuniculus]
Length = 549
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|301612587|ref|XP_002935797.1| PREDICTED: tripartite motif-containing protein 13-like [Xenopus
(Silurana) tropicalis]
gi|384952209|sp|F6ZQ54.1|TRI13_XENTR RecName: Full=Tripartite motif containing 13
Length = 408
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL + +R + +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLDGVLEENSRTMQWRPSSFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH-IIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
P GV L ++L+ +++ ++ + +P C H+ Q L +FC T + C C
Sbjct: 61 --TPTMGVNGLQVNYLLKGIVEKYNKIKVSPKMPVCKEHSDQPLNIFCSTDLKLICGSCA 118
Query: 142 GGSNHS----STSGDS 153
H S+ GD+
Sbjct: 119 TTGEHKKHVFSSIGDA 134
>gi|308481362|ref|XP_003102886.1| hypothetical protein CRE_31256 [Caenorhabditis remanei]
gi|308260589|gb|EFP04542.1| hypothetical protein CRE_31256 [Caenorhabditis remanei]
Length = 175
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N D E C C+ MYDG PK L C HT C C+ RI + + LRC CR
Sbjct: 87 NDRDAREDTHCCALCIRMYDGQAVLPKTLSCGHTFCQECIDRITV-RLQWGSWLRCSTCR 145
Query: 82 EQITIPRGGVA---ALPPSFL 99
+I +P GG A+ P+++
Sbjct: 146 RRINMPAGGFQTTYAMVPAYI 166
>gi|291239955|ref|XP_002739887.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 1046
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +E+FL C C Y K+LPC H+ C C+ ++ + + CP+CR
Sbjct: 10 EEIDENFLVCTVCSERY----RNAKILPCLHSFCEQCIDKLLEKSGGK--GIPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR--HIIPKC-STHNSQELLFCETCDTVFCLQC 140
+P G +++ P+ VN+L+ L+ ++ + + + KC +C C C C
Sbjct: 64 HDLPEGA-SSVQPNIFVNELVVLLEKRDKETNYVQKCGGCQQGSVTTYCIDCAVGLCDNC 122
Query: 141 TGGSNHSSTSGDSEHTIIPF 160
T H H ++P
Sbjct: 123 T--LPHKQLPFTKSHDVMPL 140
>gi|329664746|ref|NP_001192431.1| tripartite motif-containing protein 55 [Bos taurus]
gi|296480608|tpg|DAA22723.1| TPA: tripartite motif-containing 55 isoform 1 [Bos taurus]
Length = 545
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLC 147
>gi|395849333|ref|XP_003797283.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Otolemur garnettii]
Length = 547
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPVCEEHEEERINIYCLNCEVPTCSLC 147
>gi|405963292|gb|EKC28879.1| SH3 domain-containing RING finger protein 3 [Crassostrea gigas]
Length = 784
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
++ + NE L C CL D HT K+LPC HT C CL I ++ RE LRCP C
Sbjct: 1 MDEQSLNE-LLECSVCLDRLD---HTSKVLPCQHTFCRRCLDEIYGTK-RE---LRCPEC 52
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLM---SRQRRHIIPKCSTHNSQELLFCETCDTV 135
R + IP V LP + L+ +LL+ + + +R + H E LF + T+
Sbjct: 53 RTLVEIP---VEELPSNILLIRLLEGLKTKNSERTRSPARHGEHGYNESLFSKQSSTL 107
>gi|291388058|ref|XP_002710491.1| PREDICTED: tripartite motif-containing 55 isoform 2 [Oryctolagus
cuniculus]
Length = 453
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|291230446|ref|XP_002735174.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 722
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
++ + NE LTC C Y PKLLPC H+ C CL T + G L CP
Sbjct: 4 KLSVDRINEDLLTCPVCFERYK----QPKLLPCQHSFCEQCL----VEWTDKHGRLECPN 55
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
CR Q + LPPS ++N ++ ++ Q R
Sbjct: 56 CR-QCHNTVSNIQQLPPSMVINAVISIVEEQER 87
>gi|347658986|ref|NP_001231619.1| tripartite motif-containing protein 55 isoform 1 [Sus scrofa]
gi|325562505|gb|ADZ31293.1| muscle-specific RING finger protein 2, transcript variant 1 [Sus
scrofa]
Length = 539
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLC 147
>gi|296226598|ref|XP_002758998.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Callithrix jacchus]
Length = 546
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|443693141|gb|ELT94572.1| hypothetical protein CAPTEDRAFT_144792, partial [Capitella teleta]
Length = 97
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC-----LSRIAASQTRETGTLRCP 78
++ ++ FL C CL Y +PK L C HT C C LS + + CP
Sbjct: 11 QEIHDEFLVCKICLEAYK----SPKSLNCLHTFCEQCIENHILSESTYKKYTDYREFTCP 66
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSR 109
+CR++ +P GGV LP +FLV+ L +++ R
Sbjct: 67 LCRKRTQLPIGGVKKLPDNFLVSSLSEIVQR 97
>gi|395542419|ref|XP_003773129.1| PREDICTED: probable E3 ubiquitin-protein ligase TRIML1-like
[Sarcophilus harrisii]
Length = 430
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 24 EDFNESFL---TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+D ESF TC CL + P C H+ C+ CL + TL CP C
Sbjct: 4 KDLIESFKAGPTCSLCLDYF----TDPVTARCGHSFCIECLLQCMEGAD---ATLTCPEC 56
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK------CSTHNSQELLFCETCDT 134
++ I I + L P+ + QL R+R H++ C H +E+LFCE
Sbjct: 57 KQLIQI-----SNLIPNKDLQQLSTTRKRRRHHLLQSLENLTTCDKHGKKEMLFCEEDQK 111
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSE 169
+ C C+ H +H ++P IAI + +
Sbjct: 112 LLCESCSLAPEH------KDHQVVPMDIAIDKYKD 140
>gi|291235532|ref|XP_002737698.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ E FL+C CL +Y P +LPC HT C CL A + G L+C CR Q
Sbjct: 14 DEIGEDFLSCSICLEIY----KKPTVLPCLHTYCQQCLVDFKA---KSGGVLKCARCRIQ 66
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD RQ++
Sbjct: 67 CDTP---IQELKSNFFLTSLLDTFQRQKQ 92
>gi|260820489|ref|XP_002605567.1| hypothetical protein BRAFLDRAFT_228012 [Branchiostoma floridae]
gi|229290901|gb|EEN61577.1| hypothetical protein BRAFLDRAFT_228012 [Branchiostoma floridae]
Length = 90
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL + PK+LPC HT C CL + A++ G CP CR + +
Sbjct: 15 DFLECAICLEPF----KDPKILPCLHTFCKGCLEKFFANEGDLKGKFPCPTCRTETALLE 70
Query: 89 GGVAALPPSFLVNQLLD 105
GG+A L +F V L D
Sbjct: 71 GGLAGLKDNFFVLSLRD 87
>gi|348588737|ref|XP_003480121.1| PREDICTED: tripartite motif-containing protein 55-like isoform 2
[Cavia porcellus]
Length = 446
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|344288994|ref|XP_003416231.1| PREDICTED: tripartite motif-containing protein 59-like [Loxodonta
africana]
Length = 402
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPSCRSIIEIASTGIESLPVNFALKAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGDSE 154
+ C C T G +H D E
Sbjct: 115 LVCGHCLTIGQHHGHPIDDLE 135
>gi|291221736|ref|XP_002730877.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 723
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL+C CL + PK+LPC HT C CL A + G L+C CR Q
Sbjct: 11 EIGEDFLSCSICLEFF----KNPKVLPCLHTFCEQCLVTFKA---KSEGVLKCATCRIQC 63
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
P + L +F + LLD R+R+
Sbjct: 64 DTP---IQELKSNFFLTSLLDTFQRRRQ 88
>gi|149721361|ref|XP_001494942.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Equus
caballus]
Length = 549
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|403288829|ref|XP_003935585.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Saimiri boliviensis boliviensis]
Length = 539
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|301761992|ref|XP_002916415.1| PREDICTED: tripartite motif-containing protein 55-like isoform 1
[Ailuropoda melanoleuca]
gi|281338755|gb|EFB14339.1| hypothetical protein PANDA_004486 [Ailuropoda melanoleuca]
Length = 542
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|410987219|ref|XP_003999902.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Felis
catus]
Length = 554
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|73999171|ref|XP_544105.2| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Canis
lupus familiaris]
Length = 550
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|417400295|gb|JAA47102.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 402
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSSIEIAPTGIESLPVNFALRAIIEKYQQEDHPHIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C QC T G +H D
Sbjct: 115 LVCGQCLTIGQHHGHPIDD 133
>gi|426240445|ref|XP_004014111.1| PREDICTED: RING finger protein 223 [Ovis aries]
Length = 242
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGT--LRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q T + G+ + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGQPGSEAVPCPFCRQPTA 106
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHI 114
+P G AL S + + + RQ +
Sbjct: 107 VPAAGAPALRTSRQLQARMPVHLRQEEPV 135
>gi|332020692|gb|EGI61097.1| RING finger protein 207 [Acromyrmex echinatior]
Length = 909
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTCG C Y+ P LL C HT C C+ GT++CPIC +Q + + G
Sbjct: 28 LTCGVCHDYYN----EPCLLSCFHTFCARCIHGPHID-----GTIKCPICGQQTQL-KDG 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQC 140
PP L+ QL++L + + C + + FC TC C C
Sbjct: 78 AQLPPPDQLIRQLVELANSEN-PPCANCDKRDKSTMFFCTTCGQALCTHC 126
>gi|321474665|gb|EFX85630.1| hypothetical protein DAPPUDRAFT_313859 [Daphnia pulex]
Length = 453
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D E FL CG C YD PKLL C H+ C+ CL + T T+ CP CR+
Sbjct: 8 DDEEDFLNCGICFEYYDSDIRVPKLLCCFHSCCIVCLK---GTMKEITSTITCPFCRQDT 64
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP-KCSTHNSQELLFCETC 132
+ G +L +F + ++ QR+ + C+T + L +TC
Sbjct: 65 KLTDGVKISLTTNFYIMPRIEKAIAQRKQEMKVACATGSYNSLQPTDTC 113
>gi|426235578|ref|XP_004011757.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Ovis
aries]
Length = 543
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLC 147
>gi|432095109|gb|ELK26492.1| Tripartite motif-containing protein 55 [Myotis davidii]
Length = 351
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P+C H + + ++C C+ C C H
Sbjct: 119 SDQPRCEEHEEERINIYCLNCEVPTCSLCKIFGAHKD 155
>gi|344273129|ref|XP_003408379.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Loxodonta africana]
Length = 443
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPIRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|402878380|ref|XP_003902864.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Papio
anubis]
Length = 548
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|114620339|ref|XP_001160681.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Pan
troglodytes]
gi|397522750|ref|XP_003831418.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Pan
paniscus]
Length = 548
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|193083079|ref|NP_001122372.1| zinc finger protein ZF(Bbox/RING)-6 [Ciona intestinalis]
gi|93003142|tpd|FAA00154.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 431
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET-----GTLRCPICRE 82
E L C CL +Y +LPC H +C C + + Q R T G RCP CR
Sbjct: 19 ERLLMCPICLEIY---TKPVVILPCQHNLCRKCANDVF--QNRGTPMGSGGRFRCPTCRY 73
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRH------IIPKCSTHNSQEL-LFCETCDTV 135
++ + R GV L + LV ++D+ + R + C H +++ ++C TC
Sbjct: 74 EVVLDRHGVYGLQRNLLVENIIDMYQTEGRKPTFKTSEVVMCDQHEEEKVNIYCVTCQKP 133
Query: 136 FCLQCTGGSNHSS 148
C C +H +
Sbjct: 134 TCSLCKVFGDHQT 146
>gi|122692451|ref|NP_001073779.1| tripartite motif-containing protein 59 [Bos taurus]
gi|86437977|gb|AAI12617.1| Hypothetical LOC540154 [Bos taurus]
Length = 361
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCE 130
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCL 110
Query: 131 TCDTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 111 LDKKLVCGHCLTIGQHHGHPIDD 133
>gi|332251431|ref|XP_003274849.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Nomascus leucogenys]
Length = 547
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|291411271|ref|XP_002721922.1| PREDICTED: tripartite motif protein TRIM4 [Oryctolagus cuniculus]
Length = 475
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
EDF + LTC CL ++ P + C H C CLSR S T G CP CR Q
Sbjct: 4 EDFQDE-LTCSICLDYFED----PVSIECGHNFCRRCLSR---SWTPSGGCFLCPECR-Q 54
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK----CSTHNSQELLFCETCDTVFCLQ 139
+ P A+ P++ + ++ + R+RRH P CS H LFCE CL
Sbjct: 55 PSAP----GAMRPNWALARMTE--KRRRRHQGPAPQNLCSRHREPLRLFCEVDQRPVCLV 108
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
C H + H + P A + E L +++EC
Sbjct: 109 CRESREHRA------HAMAPIDEAFQNYREKL--RSSEC 139
>gi|261289857|ref|XP_002611791.1| hypothetical protein BRAFLDRAFT_236413 [Branchiostoma floridae]
gi|229297162|gb|EEN67800.1| hypothetical protein BRAFLDRAFT_236413 [Branchiostoma floridae]
Length = 88
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
FL C CL + PK+LPC HT C CL + Q G CP CR + +P G
Sbjct: 16 FLECTICLEPFK----EPKILPCLHTFCKGCLEKFVGKQGE--GKFPCPTCRTETVLPAG 69
Query: 90 GVAALPPSFLVNQLLD 105
GVA L +F V L D
Sbjct: 70 GVAGLKNNFFVLSLRD 85
>gi|354495775|ref|XP_003510004.1| PREDICTED: RING finger protein 223-like [Cricetulus griseus]
gi|344251666|gb|EGW07770.1| RING finger protein 183 [Cricetulus griseus]
Length = 255
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L C+H CL CL+R+AA+Q RE + CP CR+
Sbjct: 47 SPLECSICFSGYDNVFKTPKELSCTHVFCLECLARLAAAQPAGRPGRE--AVPCPFCRQP 104
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 105 TTVPAAGAPAL 115
>gi|426359811|ref|XP_004047155.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Gorilla gorilla gorilla]
Length = 548
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|426218032|ref|XP_004003254.1| PREDICTED: tripartite motif-containing protein 59 [Ovis aries]
Length = 404
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 5 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 52
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCE 130
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 53 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCL 112
Query: 131 TCDTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 113 LDKKLVCGHCLTIGQHHGHPIDD 135
>gi|156358729|ref|XP_001624668.1| predicted protein [Nematostella vectensis]
gi|156211461|gb|EDO32568.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFKIS 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
V++L +F++N ++ ++P ++ +S++ C+ CD+
Sbjct: 65 PADVSSLKVNFMINSIIS--------VLPLFTSEDSKKKTVCQMCDS 103
>gi|291239557|ref|XP_002739689.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 744
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +ESFL C C Y K+LPC H+ C HCL+ +AA + + CP+C++
Sbjct: 11 EEIDESFLVCSFCSKWYS----DAKILPCLHSFCQHCLNELAAKNGGK--HIFCPVCKKG 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQ 110
+P GG + VN+L+ L ++
Sbjct: 65 HDLP-GGTKGASNNHFVNELIALFKKK 90
>gi|260808480|ref|XP_002599035.1| hypothetical protein BRAFLDRAFT_104269 [Branchiostoma floridae]
gi|229284311|gb|EEN55047.1| hypothetical protein BRAFLDRAFT_104269 [Branchiostoma floridae]
Length = 637
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+L C HT C CL ++ Q + L CP CR +
Sbjct: 13 ISDDFLECQICLESY----RRPKVLSCLHTFCQECLEQLHKRQG-DAQHLECPTCRTKTE 67
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT-----VFCLQC 140
+P GV AL +F V L D + + H K T + C C++ +C+ C
Sbjct: 68 LPGSGVTALKDNFFVESLADAV---KLHETVK-ETEGESSRVVCGLCESGQEAKSYCVDC 123
>gi|296226600|ref|XP_002758999.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Callithrix jacchus]
Length = 538
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|296491141|tpg|DAA33214.1| TPA: tripartite motif-containing 59 [Bos taurus]
Length = 362
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCE 130
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCL 110
Query: 131 TCDTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 111 LDKKLVCGHCLTIGQHHGHPIDD 133
>gi|291241688|ref|XP_002740745.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 728
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ + FLTC CL Y PK LPC HT C HCL +A + + +CP C
Sbjct: 12 DEITKDFLTCCICLEHY----QQPKALPCLHTFCEHCLISLADNTDLD---FKCPTCSTP 64
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
+ G+A L +F ++ LL M R+ + + S CE C++
Sbjct: 65 CDLGEKGIAGLKGNFFISSLLHEMQRRAKRLSKTASVK-------CEGCES 108
>gi|291229458|ref|XP_002734690.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 722
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ +E FL+C CL Y P LLPC HT C CL A + G L+C CR Q
Sbjct: 10 KEISEDFLSCAICLENY----KNPTLLPCLHTFCQQCLVTFKA---KSGGVLKCATCRMQ 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQ 110
P + L +F + LLD RQ
Sbjct: 63 CDTP---IQELKSNFFLTSLLDAFQRQ 86
>gi|157822147|ref|NP_001102415.1| tripartite motif-containing protein 59 [Rattus norvegicus]
gi|149048334|gb|EDM00910.1| rCG63400 [Rattus norvegicus]
gi|197245953|gb|AAI68884.1| Tripartite motif-containing 59 [Rattus norvegicus]
Length = 403
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C ++D P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFDD----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ + C H Q L ++C
Sbjct: 55 KCPNCRSIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|355779727|gb|EHH64203.1| Muscle-specific RING finger protein 2 [Macaca fascicularis]
Length = 547
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|355569135|gb|EHH25363.1| Muscle-specific RING finger protein 2 [Macaca mulatta]
Length = 548
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|332251433|ref|XP_003274850.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Nomascus leucogenys]
Length = 539
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|291239957|ref|XP_002739888.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 734
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 20/124 (16%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ +++FL C C Y K+LPC H+ C HC+ ++ Q + CP+CR
Sbjct: 10 KEIDDNFLVCTVCSERY----RNAKILPCLHSFCEHCIDKLL--QKSGGKGIPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD----TVFCLQ 139
+P G +++ P+ VN+L+ L+ ++ + T++ Q+ CE C T +C+
Sbjct: 64 HDLPEGA-SSVQPNVFVNELVVLLEKRYK------ETNDVQK---CEGCQQGSVTTYCID 113
Query: 140 CTGG 143
C G
Sbjct: 114 CAVG 117
>gi|149522674|ref|XP_001519418.1| PREDICTED: hypothetical protein LOC100090223, partial
[Ornithorhynchus anatinus]
Length = 151
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP- 87
S +C C+ YDG TPK L C H CL CLSR++ + LRCP+CR +P
Sbjct: 7 SPASCLICVSPYDGLFRTPKRLACGHVFCLECLSRLSLASPAGAQVLRCPVCRRPTLLPA 66
Query: 88 RGGVAALP 95
R G ALP
Sbjct: 67 RAGPPALP 74
>gi|14588848|emb|CAC43020.1| RING finger protein 29 [Homo sapiens]
Length = 548
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVGNIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|322800750|gb|EFZ21654.1| hypothetical protein SINV_80573 [Solenopsis invicta]
Length = 924
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTCG C Y+ P LL C HT C C+ GT++CPIC +Q + + G
Sbjct: 28 LTCGVCHNYYN----EPCLLSCFHTFCARCIHGPHID-----GTVKCPICGQQTQL-KDG 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQE---LLFCETCDTVFCLQC 140
PP L+ QL++L + + P C+ + ++ + FC TC C C
Sbjct: 78 AQLPPPDQLIRQLVELANSEN----PPCANCDKRDKSTMFFCTTCGQALCTHC 126
>gi|156370856|ref|XP_001628483.1| predicted protein [Nematostella vectensis]
gi|156215461|gb|EDO36420.1| predicted protein [Nematostella vectensis]
Length = 789
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 16 VETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL 75
+E +S +D + S +TC C +Y P++ PC HT C CL + AS+ + +
Sbjct: 1 MEPISEILKDVSWSRVTCALCKEIYT----DPRVTPCLHTFCRGCLE-VLASRNPYSSQI 55
Query: 76 RCPICREQITIPRG--GVAALPPSFLVNQLLDLMSRQ----RRHIIPKCSTHNSQELLFC 129
+CPIC ++ P G A PP+ V +LL++ S + R+ KC N +C
Sbjct: 56 QCPICEAEVNKPDGLDHFEAYPPNIYVGRLLEIYSAKFGVTRKDKCGKCDKINELN-SYC 114
Query: 130 ETCDTVFCLQC 140
C C C
Sbjct: 115 VECSVFMCEDC 125
>gi|34878836|ref|NP_908973.1| tripartite motif-containing protein 55 isoform 1 [Homo sapiens]
gi|78099806|sp|Q9BYV6.2|TRI55_HUMAN RecName: Full=Tripartite motif-containing protein 55; AltName:
Full=Muscle-specific RING finger protein 2;
Short=MuRF-2; Short=MuRF2; AltName: Full=RING finger
protein 29
gi|119607300|gb|EAW86894.1| tripartite motif-containing 55, isoform CRA_b [Homo sapiens]
gi|193787199|dbj|BAG52405.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|390361630|ref|XP_003729968.1| PREDICTED: uncharacterized protein LOC100889371 [Strongylocentrotus
purpuratus]
Length = 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL +++ LL C HT C CL + ++ + +L CP+CR + + RG
Sbjct: 13 LVCPLCLDIFEKAT----LLACGHTFCKACLQNLDKTKRKNASSLVCPLCRRESALGRGR 68
Query: 91 VAALPPSFLVNQLLD 105
V LPP+ VN L+D
Sbjct: 69 VDGLPPNITVNSLVD 83
>gi|348551570|ref|XP_003461603.1| PREDICTED: RING finger protein 223-like [Cavia porcellus]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE---TGTLRCPICR 81
D S L C C YD TPK L C+H CL CL+R+AA+Q T + CP CR
Sbjct: 39 DRVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTNLPGTEAVPCPFCR 98
Query: 82 EQITIPRGGVAAL 94
+ +P GV L
Sbjct: 99 QPTAVPAAGVPGL 111
>gi|345321215|ref|XP_001516503.2| PREDICTED: RING finger protein 223-like [Ornithorhynchus anatinus]
Length = 240
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRETGTLRCPICREQITI 86
S L C C YD TPKLL CSH CL C++R+ A+ T+ CP CR+ +
Sbjct: 43 SPLECSICFTGYDNVFKTPKLLACSHAFCLECVARLVAALPDALAEPTVPCPFCRQPTAV 102
Query: 87 PRGGVAALP 95
P G ALP
Sbjct: 103 PLAGAPALP 111
>gi|405965347|gb|EKC30728.1| RING finger protein nhl-1 [Crassostrea gigas]
Length = 1031
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
+ L C CL Y+ PKLLPC HT C CL + TR TL+CP CR + +
Sbjct: 13 DELLRCAICLDRYN----NPKLLPCQHTFCESPCLEGLVRGLTR---TLKCPECRAEHIV 65
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV++ P + + LDL
Sbjct: 66 PYRGVSSYPNNLTIQNFLDL 85
>gi|332214610|ref|XP_003256428.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Nomascus leucogenys]
Length = 410
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----- 74
S+ +F E LTC C +++ P++LPCSHT C +CL I +
Sbjct: 5 SLEMHNFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRI 59
Query: 75 -LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETC 132
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 60 PLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLD 119
Query: 133 DTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 120 KKLVCGHCLTIGQHHGHPIDD 140
>gi|296226602|ref|XP_002759000.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Callithrix jacchus]
Length = 450
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|291223217|ref|XP_002731607.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 730
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 15 LVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT 74
+ +S + + LTC CL + TPK+LPC HT C HCL TG
Sbjct: 1 MASNISAVKDQIRDDMLTCSLCLETF----KTPKVLPCLHTFCEHCLESWVE---ESTGK 53
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
L CP+CR +P + AL +F++ L D +S
Sbjct: 54 LTCPLCR--FEVPDNNIQALQTNFILVGLSDYIS 85
>gi|124486877|ref|NP_001074750.1| tripartite motif-containing protein 55 [Mus musculus]
gi|148702932|gb|EDL34879.1| mCG19772 [Mus musculus]
gi|151555211|gb|AAI48458.1| Tripartite motif-containing 55 [synthetic construct]
gi|157170512|gb|AAI53053.1| Tripartite motif-containing 55 [synthetic construct]
Length = 545
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 LDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|338728203|ref|XP_001494919.2| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Equus
caballus]
Length = 542
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|347658988|ref|NP_001231620.1| tripartite motif-containing protein 55 isoform 2 [Sus scrofa]
gi|325562540|gb|ADZ31294.1| muscle-specific RING finger protein 2, transcript variant 2 [Sus
scrofa]
Length = 443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|297484223|ref|XP_002694237.1| PREDICTED: RING finger protein 223 [Bos taurus]
gi|296479138|tpg|DAA21253.1| TPA: hypothetical protein BOS_16064 [Bos taurus]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGT--LRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q T + G+ + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGQPGSEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPAAGAPAL 115
>gi|395849337|ref|XP_003797285.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Otolemur garnettii]
Length = 539
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPVCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|321471398|gb|EFX82371.1| hypothetical protein DAPPUDRAFT_302631 [Daphnia pulex]
Length = 342
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
++N +E F+TC CL +D PK L CSHT+CL C R+ T+ CP
Sbjct: 3 NLNVNTLDEEFITCQICLYEFDEENKKPKFLQCSHTICLECF-----QAARQRDTITCPF 57
Query: 80 CR 81
CR
Sbjct: 58 CR 59
>gi|440911737|gb|ELR61374.1| RING finger protein 183 [Bos grunniens mutus]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGT--LRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q T + G+ + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGQPGSEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPAAGAPAL 115
>gi|390346344|ref|XP_003726530.1| PREDICTED: uncharacterized protein LOC100888818 [Strongylocentrotus
purpuratus]
Length = 670
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR- 76
+++ +++ F+E L C C G K L C H+ C CL R + GT R
Sbjct: 4 SITKSFQTFDEE-LECVICT----GRLLNAKFLQCLHSFCAECLERCVTVRGNIEGTCRL 58
Query: 77 ----CPICREQITIPRGGVAALPPSFLVNQLLDLMS--------RQRRHIIPKCSTHNSQ 124
CP+CRE+ +P G+ L P+ L N+++ + C T S+
Sbjct: 59 RSIPCPLCREETILPDNGINGLKPNNLANKVVQALEGNDHCAKLMDSELCCESCRTKRSR 118
Query: 125 ELLFCETCDTVFCLQCTGGSNHSS 148
+ +C+ C C C G +HSS
Sbjct: 119 AVAYCQDCRHFICRDCVG--SHSS 140
>gi|350585496|ref|XP_003356161.2| PREDICTED: RING finger protein 223-like [Sus scrofa]
Length = 250
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 46 SPLECSICFSGYDNTFKTPKELSCTHVFCLECLARLAAAQPSGRPGGEAMPCPFCRQPTA 105
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 106 VPAAGAPAL 114
>gi|297286509|ref|XP_001093190.2| PREDICTED: tripartite motif-containing protein 59-like [Macaca
mulatta]
Length = 588
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---------- 74
+F E LTC C +++ P++LPCSHT C +CL I + +G
Sbjct: 188 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIP 238
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCD 133
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 239 LKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDK 298
Query: 134 TVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 299 KLVCGHCLTIGQHHGHPIDD 318
>gi|395849335|ref|XP_003797284.1| PREDICTED: tripartite motif-containing protein 55 isoform 2
[Otolemur garnettii]
Length = 451
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPVCEEHEEERINIYCLNCEVPTCSLC 147
>gi|260793565|ref|XP_002591782.1| hypothetical protein BRAFLDRAFT_123529 [Branchiostoma floridae]
gi|229276992|gb|EEN47793.1| hypothetical protein BRAFLDRAFT_123529 [Branchiostoma floridae]
Length = 535
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 16/140 (11%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR-ETGTLRCPICREQI 84
+E FL C C + PK+L C HT CL CL R T CP+CR++
Sbjct: 9 ISEDFLKCQICHDTF----KRPKVLSCLHTFCLQCLKSYLKKNPRVSIKTFLCPLCRQET 64
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP------KCSTHNSQELLFCETCDTVFCL 138
P G L +F V+ LL+ +S + + CS S C C+ C+
Sbjct: 65 ATPPTGADGLKDNFFVSNLLEALSTLKTFKVKGFVACGGCSRSASSR---CMECEDFLCV 121
Query: 139 QCTGGSNHSSTSGDSEHTII 158
C G H+ +HT++
Sbjct: 122 HCHG--VHAKLKVTRDHTVL 139
>gi|34878821|ref|NP_149047.2| tripartite motif-containing protein 55 isoform 2 [Homo sapiens]
gi|119607299|gb|EAW86893.1| tripartite motif-containing 55, isoform CRA_a [Homo sapiens]
Length = 540
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|24939889|emb|CAD24432.1| RING finger protein 29 [Homo sapiens]
Length = 540
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|58866012|ref|NP_001012218.1| tripartite motif-containing protein 55 [Rattus norvegicus]
gi|81175037|sp|Q5PQN5.1|TRI55_RAT RecName: Full=Tripartite motif-containing protein 55; AltName:
Full=Muscle-specific RING finger protein 2;
Short=MuRF-2; Short=MuRF2; AltName: Full=RING finger
protein 29
gi|56268890|gb|AAH87100.1| Tripartite motif-containing 55 [Rattus norvegicus]
gi|149048526|gb|EDM01067.1| rCG41386 [Rattus norvegicus]
Length = 545
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 LDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|403255241|ref|XP_003920350.1| PREDICTED: midline-1 isoform 5 [Saimiri boliviensis boliviensis]
Length = 629
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|291227073|ref|XP_002733512.1| PREDICTED: tripartite motif protein-like, partial [Saccoglossus
kowalevskii]
Length = 594
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
NE L C C +YD TPK LPC HT C+ CL A E +CP C + I
Sbjct: 15 NEVPLKCSLCKYVYDVTNRTPKYLPCLHTFCVLCL----AGHVGE--IFQCPGCEHKSNI 68
Query: 87 PRGGVAALPPSFLV---NQLLDLMSRQRRHIIPKCST--HNSQELLF--CETCDTVFCLQ 139
P+ G+ +P +F NQLL ++ + + C + N+Q L C C+ C
Sbjct: 69 PK-GIDLIPTNFAFLNYNQLLCHKNQIKHGKLTTCQSCCRNNQTLNVSHCSDCEAYLCQS 127
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILL 172
C NH S H + +K++SE LL
Sbjct: 128 CH--DNHIHIEALSTHEVKTIE-ELKQLSEELL 157
>gi|156360806|ref|XP_001625215.1| predicted protein [Nematostella vectensis]
gi|156212037|gb|EDO33115.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
V++L +F++N ++ ++P ++ +S++ C+ CD+
Sbjct: 65 PADVSSLKVNFMINSIIS--------VLPLFTSEDSKKKTVCQMCDS 103
>gi|156359735|ref|XP_001624921.1| predicted protein [Nematostella vectensis]
gi|156211727|gb|EDO32821.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSICIEHFND----PRVLPCFHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
V++L +F++N ++ ++P ++ +S++ C+ CD+
Sbjct: 65 PADVSSLKVNFMINSIIS--------VLPLFTSEDSKKKTVCQMCDS 103
>gi|426359813|ref|XP_004047156.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Gorilla gorilla gorilla]
Length = 540
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|402861075|ref|XP_003894933.1| PREDICTED: tripartite motif-containing protein 59 isoform 3 [Papio
anubis]
Length = 588
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 190 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 241
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVF 136
P CR I I G+ +LP +F + +++ ++ I C H Q L ++C +
Sbjct: 242 PNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLV 301
Query: 137 CLQC-TGGSNHSSTSGD 152
C C T G +H D
Sbjct: 302 CGHCLTIGQHHGHPIDD 318
>gi|301791023|ref|XP_002930511.1| PREDICTED: tripartite motif-containing protein 59-like [Ailuropoda
melanoleuca]
Length = 403
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPSCRSIIEIAPTGIESLPVNFALKAIIEKYQQEDHRDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|291241186|ref|XP_002740491.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 1135
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 21/119 (17%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-LRCPICRE 82
++ +E+FL+CG C Y K+LPC H+ C HCL ++ +TG + CP+CR
Sbjct: 12 DEIDETFLSCGVCSERYSNA----KVLPCQHSFCEHCLIKL----VEKTGQPIHCPLCRR 63
Query: 83 QITIPRGGVAALPPSFLVNQL------LDLMSRQRRHIIPKCSTHNSQELLFC--ETCD 133
+ I V+ LP ++ +N++ D+ S++ + + + +H +Q L C + CD
Sbjct: 64 KHDIE---VSDLPNNYFINEISEAFKNRDVGSQEPKQCVCE-KSHANQRCLDCALDICD 118
>gi|340383800|ref|XP_003390404.1| PREDICTED: hypothetical protein LOC100634336, partial [Amphimedon
queenslandica]
Length = 1442
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC C Y P +LPC H+ C CL + Q +L+CP C + +P G
Sbjct: 1 MTCEVCSEYYT----DPLMLPCLHSFCKKCLIKAKEKQGSADISLKCPTCDTSVNLPDGK 56
Query: 91 VAALPPSFLVNQLL------DLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGS 144
+ L + + Q + D MS++ + +CS + + FC C C C +
Sbjct: 57 IEGLTQNLWLAQQVKEASVKDKMSKKESTLCEQCSEDTA--VTFCCECWLFLCDFCK--T 112
Query: 145 NHSSTSGDSEHTII 158
H S+H ++
Sbjct: 113 AHKRIKSTSQHKLV 126
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC C Y P +LPC H+ C CL + Q +L+CP + +P G
Sbjct: 698 MTCEVCSEYYT----DPLMLPCLHSFCKKCLIKAKDKQGSADTSLKCPTSDTSVNLPDGK 753
Query: 91 VAALPPSFLVNQ------LLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQC 140
+ L + + Q + D MS++ + +CS + + FC C C C
Sbjct: 754 IEGLTQNLWLAQQVKEASIKDKMSKKESTLCEQCS--DDIAVTFCYECWLFLCNFC 807
>gi|390369998|ref|XP_001190337.2| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like, partial
[Strongylocentrotus purpuratus]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL+ + + LRCP+CR + +
Sbjct: 13 LECPVCLNTFTD----PKILSCSHTYCKTCLNNLLEFYGNDQ-MLRCPVCRAETQVQNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
V LP + + L++ + Q ++ S Q +++C+ C C+ C + HS
Sbjct: 68 VNKLPTNLALKSLIEDVKTQYQYCTHCKSEEQPQAVVYCQDCGMYLCITC--HNKHSQWQ 125
Query: 151 GDSEHTIIPFS 161
H ++ S
Sbjct: 126 NFINHEVLAMS 136
>gi|281341327|gb|EFB16911.1| hypothetical protein PANDA_020982 [Ailuropoda melanoleuca]
Length = 402
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPSCRSIIEIAPTGIESLPVNFALKAIIEKYQQEDHRDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|260811658|ref|XP_002600539.1| hypothetical protein BRAFLDRAFT_150711 [Branchiostoma floridae]
gi|229285826|gb|EEN56551.1| hypothetical protein BRAFLDRAFT_150711 [Branchiostoma floridae]
Length = 171
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC C+ + P++LPC HT C CL A Q L CP CR Q+++P G
Sbjct: 1 MTCPVCMLHF----RDPRVLPCLHTFCRECLQEWATKQQ----PLECPTCRTQVSLPDQG 52
Query: 91 VAALPPSFLVNQLLDLMS 108
V L +F VN LLD +
Sbjct: 53 VDGLRTNFYVNNLLDFAA 70
>gi|149721363|ref|XP_001494962.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Equus
caballus]
Length = 453
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|410987221|ref|XP_003999903.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Felis
catus]
Length = 458
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|301761994|ref|XP_002916416.1| PREDICTED: tripartite motif-containing protein 55-like isoform 2
[Ailuropoda melanoleuca]
Length = 446
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|114620337|ref|XP_001160624.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Pan
troglodytes]
gi|397522752|ref|XP_003831419.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Pan
paniscus]
Length = 540
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|402878382|ref|XP_003902865.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Papio
anubis]
Length = 540
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|432930304|ref|XP_004081421.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63-like [Oryzias
latipes]
Length = 344
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICR 81
D E L+C CL M+ +LPC H +C C S + S+ G RCP CR
Sbjct: 17 DSLEKQLSCPICLEMFT---KPVVILPCQHNLCRSCASDLYDSRNPYRYSGGVFRCPTCR 73
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQ---------------RRHIIPKCSTHNSQEL 126
++ + R GV L + LV ++D+ +Q + P C H+ + +
Sbjct: 74 FEVVLDRHGVHGLQRNLLVENIIDIYKQQQEGRNSGDTETSLKTKESKEPMCQEHDDERI 133
Query: 127 -LFCETCDTVFCLQCTGGSNHSS 148
++C TC C C H
Sbjct: 134 NIYCVTCQVPTCSMCKVFGQHKD 156
>gi|74215829|dbj|BAE23442.1| unnamed protein product [Mus musculus]
Length = 285
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L CSH CL CL+R+AA+Q RE + CP CR+
Sbjct: 77 SPLECSICFSGYDNIFKTPKELSCSHVFCLECLARLAAAQPAGRSGRE--AVPCPFCRQP 134
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 135 TTVPVAGAPAL 145
>gi|338819345|sp|Q3UV31.2|RN223_MOUSE RecName: Full=RING finger protein 223
Length = 285
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L CSH CL CL+R+AA+Q RE + CP CR+
Sbjct: 77 SPLECSICFSGYDNIFKTPKELSCSHVFCLECLARLAAAQPAGRSGRE--AVPCPFCRQP 134
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 135 TTVPVAGAPAL 145
>gi|321471216|gb|EFX82189.1| hypothetical protein DAPPUDRAFT_302623 [Daphnia pulex]
Length = 667
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
ED E ++TC C +D + PKLL CSHTVCL CL +I ++CP+CR
Sbjct: 3 EDATEHYITCRVCYLQFDDHQVKPKLLSCSHTVCLTCLKQIY----NHGAVIKCPVCR 56
>gi|296480609|tpg|DAA22724.1| TPA: tripartite motif-containing 55 isoform 2 [Bos taurus]
Length = 449
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|345793078|ref|XP_003433708.1| PREDICTED: tripartite motif-containing protein 55 [Canis lupus
familiaris]
Length = 454
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|403288827|ref|XP_003935584.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Saimiri boliviensis boliviensis]
Length = 443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|297279158|ref|XP_002801685.1| PREDICTED: hypothetical protein LOC100428459 [Macaca mulatta]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+ T
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTT 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPPAGAPAL 115
>gi|403255233|ref|XP_003920346.1| PREDICTED: midline-1 isoform 1 [Saimiri boliviensis boliviensis]
gi|403255235|ref|XP_003920347.1| PREDICTED: midline-1 isoform 2 [Saimiri boliviensis boliviensis]
gi|403255237|ref|XP_003920348.1| PREDICTED: midline-1 isoform 3 [Saimiri boliviensis boliviensis]
gi|403255239|ref|XP_003920349.1| PREDICTED: midline-1 isoform 4 [Saimiri boliviensis boliviensis]
Length = 667
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|345806736|ref|XP_003435491.1| PREDICTED: midline-1 [Canis lupus familiaris]
Length = 629
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|405957745|gb|EKC23932.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 631
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 46 TPKLLPCSHTVCLHCLSRIAAS--QTRETGT-LRCPICREQITIPRGGVAALPPSFL--V 100
TPK+LPC HT C +CLS S +T+E+ CP+CR + P V + L V
Sbjct: 28 TPKILPCMHTFCHNCLSSYILSTCKTKESPVGFPCPLCRRFVPAPSFSVEVEKWTELIPV 87
Query: 101 NQLLDLMSRQRRHIIPKCSTHNS--QELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
N+++ +S +R + C N + +CE+C + C+ C S+ S + H++I
Sbjct: 88 NKIIHTLSVKRDKLCDACKRANEEIEASDWCESCSELLCVLCVKYHERSAVSKN--HSLI 145
Query: 159 PFSIAIKRMSE 169
P + + +SE
Sbjct: 146 PI-VTLNNVSE 155
>gi|332223801|ref|XP_003261056.1| PREDICTED: midline-1 isoform 5 [Nomascus leucogenys]
Length = 629
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|300797111|ref|NP_150631.1| midline-1 isoform 2 [Homo sapiens]
gi|390479519|ref|XP_002807914.2| PREDICTED: midline-1 [Callithrix jacchus]
gi|397481518|ref|XP_003811990.1| PREDICTED: midline-1 isoform 5 [Pan paniscus]
gi|168275800|dbj|BAG10620.1| midline-1 [synthetic construct]
gi|410227082|gb|JAA10760.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410301586|gb|JAA29393.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
Length = 629
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|34878844|ref|NP_908974.1| tripartite motif-containing protein 55 isoform 3 [Homo sapiens]
gi|33871582|gb|AAH07750.2| Tripartite motif-containing 55 [Homo sapiens]
gi|119607301|gb|EAW86895.1| tripartite motif-containing 55, isoform CRA_c [Homo sapiens]
gi|193787126|dbj|BAG52332.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|4557753|ref|NP_000372.1| midline-1 isoform 1 [Homo sapiens]
gi|15451852|ref|NP_150632.1| midline-1 isoform 1 [Homo sapiens]
gi|148833499|ref|NP_001092094.1| midline-1 isoform 1 [Homo sapiens]
gi|300797132|ref|NP_001180206.1| midline-1 isoform 1 [Homo sapiens]
gi|397481510|ref|XP_003811986.1| PREDICTED: midline-1 isoform 1 [Pan paniscus]
gi|397481512|ref|XP_003811987.1| PREDICTED: midline-1 isoform 2 [Pan paniscus]
gi|397481514|ref|XP_003811988.1| PREDICTED: midline-1 isoform 3 [Pan paniscus]
gi|397481516|ref|XP_003811989.1| PREDICTED: midline-1 isoform 4 [Pan paniscus]
gi|397481520|ref|XP_003811991.1| PREDICTED: midline-1 isoform 6 [Pan paniscus]
gi|22653810|sp|O15344.1|TRI18_HUMAN RecName: Full=Midline-1; AltName: Full=Midin; AltName: Full=Midline
1 RING finger protein; AltName: Full=Putative
transcription factor XPRF; AltName: Full=RING finger
protein 59; AltName: Full=Tripartite motif-containing
protein 18
gi|11228709|gb|AAG33130.1|AF269101_1 midline 1 [Homo sapiens]
gi|12275914|gb|AAG50191.1|AF230976_1 tripartite motif protein TRIM18 alpha [Homo sapiens]
gi|2612793|emb|CAA74018.1| putative transcription factor XPRF [Homo sapiens]
gi|2827994|gb|AAB99951.1| ring finger protein [Homo sapiens]
gi|3462507|gb|AAC33000.1| midline 1 fetal kidney isoform 1 [Homo sapiens]
gi|3462509|gb|AAC33001.1| midline 1 fetal kidney isoform 2 [Homo sapiens]
gi|31565478|gb|AAH53626.1| Midline 1 (Opitz/BBB syndrome) [Homo sapiens]
gi|119619185|gb|EAW98779.1| midline 1 (Opitz/BBB syndrome), isoform CRA_a [Homo sapiens]
gi|119619187|gb|EAW98781.1| midline 1 (Opitz/BBB syndrome), isoform CRA_a [Homo sapiens]
gi|167773209|gb|ABZ92039.1| midline 1 (Opitz/BBB syndrome) [synthetic construct]
gi|355704611|gb|EHH30536.1| Midline-1 [Macaca mulatta]
gi|355757178|gb|EHH60703.1| Midline-1 [Macaca fascicularis]
gi|410227084|gb|JAA10761.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410264674|gb|JAA20303.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410301582|gb|JAA29391.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410301584|gb|JAA29392.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
gi|410340361|gb|JAA39127.1| midline 1 (Opitz/BBB syndrome) [Pan troglodytes]
Length = 667
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|332223793|ref|XP_003261052.1| PREDICTED: midline-1 isoform 1 [Nomascus leucogenys]
gi|332223795|ref|XP_003261053.1| PREDICTED: midline-1 isoform 2 [Nomascus leucogenys]
gi|332223797|ref|XP_003261054.1| PREDICTED: midline-1 isoform 3 [Nomascus leucogenys]
gi|332223799|ref|XP_003261055.1| PREDICTED: midline-1 isoform 4 [Nomascus leucogenys]
gi|441673044|ref|XP_004092405.1| PREDICTED: midline-1 [Nomascus leucogenys]
Length = 667
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|156360820|ref|XP_001625222.1| predicted protein [Nematostella vectensis]
gi|156212044|gb|EDO33122.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C HCL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCLHSFCRHCLEELAV-HSEGRGKLVCPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
V++L +F++N ++ ++P ++ +S++ C+ CD+
Sbjct: 65 PADVSSLKVNFMINSIIS--------VLPLLTSEDSKKKTVCQMCDS 103
>gi|332251429|ref|XP_003274848.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Nomascus leucogenys]
Length = 451
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|14588846|emb|CAC43019.1| RING finger protein 29 [Homo sapiens]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVGNIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|338729163|ref|XP_003365837.1| PREDICTED: midline-1 [Equus caballus]
Length = 629
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|426235580|ref|XP_004011758.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Ovis
aries]
Length = 447
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|12275916|gb|AAG50192.1|AF230977_1 tripartite motif protein TRIM18 beta [Homo sapiens]
gi|119619186|gb|EAW98780.1| midline 1 (Opitz/BBB syndrome), isoform CRA_b [Homo sapiens]
gi|189054709|dbj|BAG37559.1| unnamed protein product [Homo sapiens]
Length = 552
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|402878378|ref|XP_003902863.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Papio
anubis]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|345312977|ref|XP_001516261.2| PREDICTED: E3 ubiquitin-protein ligase TRIM63-like [Ornithorhynchus
anatinus]
Length = 357
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ---------TRETGTLRCP 78
E L C CL M+ +LPC H +C C S I + + G RCP
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAANPYLPNRGGSLSGGRFRCP 74
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFCET 131
CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C T
Sbjct: 75 SCRHEVVMDRHGVYGLQRNLLVENIIDIYKQECSSRPPQKGSHPMCKEHEDEKINIYCVT 134
Query: 132 CDTVFCLQCTGGSNHSS 148
C+T C C H
Sbjct: 135 CETPTCSMCKVFGAHKD 151
>gi|308505564|ref|XP_003114965.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
gi|308259147|gb|EFP03100.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-QTRETGT------LRCPICREQIT 85
C C+ ++D HTPK+L C H+ C+ C+ R S Q TG C +CR ++
Sbjct: 25 CPICMEVFDTTSHTPKVLECGHSFCMSCIKRTVESIQVSHTGNGDVDMAFCCSLCRRSMS 84
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHII 115
IP GV+ P + +QL+D ++ Q ++
Sbjct: 85 IPSTGVSGFPTN---HQLIDAIAPQDSRVM 111
>gi|114620341|ref|XP_519791.2| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Pan
troglodytes]
gi|397522748|ref|XP_003831417.1| PREDICTED: tripartite motif-containing protein 55 isoform 1 [Pan
paniscus]
gi|410341959|gb|JAA39926.1| tripartite motif containing 55 [Pan troglodytes]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|410988066|ref|XP_004000309.1| PREDICTED: midline-1 isoform 2 [Felis catus]
Length = 629
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|260808159|ref|XP_002598875.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
gi|229284150|gb|EEN54887.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
Length = 564
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
DF E LTC CL ++ PK+LPC HT C CL I + R +CP+C Q+
Sbjct: 11 DFREE-LTCSICLELFT----RPKVLPCMHTFCQDCLQGINVA--RREMPFKCPLCHRQV 63
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV LP + L+ L + + +
Sbjct: 64 KLPPQGVEGLPDNHLITTLCERLQQ 88
>gi|426359809|ref|XP_004047154.1| PREDICTED: tripartite motif-containing protein 55 isoform 1
[Gorilla gorilla gorilla]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|350405986|ref|XP_003487620.1| PREDICTED: hypothetical protein LOC100746052 [Bombus impatiens]
Length = 1795
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|261289253|ref|XP_002603069.1| hypothetical protein BRAFLDRAFT_63298 [Branchiostoma floridae]
gi|229288386|gb|EEN59081.1| hypothetical protein BRAFLDRAFT_63298 [Branchiostoma floridae]
Length = 694
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC CL ++ PK+LPC HT C C+ A Q +CP+CR+Q+ +
Sbjct: 16 LTCSICLELFT----RPKVLPCQHTFCQDCIQFHALVQI----PFQCPVCRQQVRLTPKE 67
Query: 91 VAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
V + S +V L + + +Q KC H+S+EL L+C+ C C C
Sbjct: 68 VPGMQDSRIVANLCERLKKQETLPGEVKEEHQSTNKCILHSSKELKLYCKQCQMPVCELC 127
Query: 141 --TGGSNHSSTS 150
NH +T+
Sbjct: 128 LEEKHDNHRTTT 139
>gi|260781255|ref|XP_002585735.1| hypothetical protein BRAFLDRAFT_72273 [Branchiostoma floridae]
gi|229270771|gb|EEN41746.1| hypothetical protein BRAFLDRAFT_72273 [Branchiostoma floridae]
Length = 488
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ + FL C CL + PK+LPC HT CL+ A + + + CP CR +
Sbjct: 7 KEISNDFLECQICLQSF----REPKILPCLHTFGKGCLAEYAKAHCVDGDQIECPTCRSK 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR------HII---PKCSTHNSQELLFCETCDT 134
+P G V L +F V L D ++ + I+ P C + Q C CD
Sbjct: 63 SPLPGGTVDGLKNNFFVESLKDTVNLHKTLESEGPEIVCSNPYCDS-KGQATSRCLNCDE 121
Query: 135 VFCLQCT 141
+ C +C
Sbjct: 122 LLCAECV 128
>gi|410988064|ref|XP_004000308.1| PREDICTED: midline-1 isoform 1 [Felis catus]
Length = 667
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|306922560|gb|ADN07450.1| tripartite motif-containing 55, 5 prime [Microtus ochrogaster]
gi|306922565|gb|ADN07454.1| tripartite motif-containing 55, 5 prime [Microtus ochrogaster]
Length = 286
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H+ + + ++C C+ C C H
Sbjct: 119 SEQPMCEEHDEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|291231331|ref|XP_002735618.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 726
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 10 STNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT 69
++N +L++ V+ E FL+C CL +Y PK+LPC HT C CL +
Sbjct: 3 ASNKSLLDEVT-------EDFLSCSICLEIY----KNPKVLPCLHTYCQQCL---VTFKD 48
Query: 70 RETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ L+C CR Q P + + +F + LLD RQR+
Sbjct: 49 KSGVVLKCATCRIQCDTP---IEEMKSNFFLTSLLDTFQRQRQ 88
>gi|402852573|ref|XP_003890992.1| PREDICTED: RING finger protein 223 [Papio anubis]
Length = 248
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+ T
Sbjct: 46 SPLECSICFSGYDNIFKTPKELSCTHIFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTT 105
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 106 VPPAGAPAL 114
>gi|344273131|ref|XP_003408380.1| PREDICTED: tripartite motif-containing protein 55 isoform 3
[Loxodonta africana]
Length = 241
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPIRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|313747590|ref|NP_001186333.1| tripartite motif-containing protein 55 [Gallus gallus]
Length = 443
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 23/161 (14%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++L S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLGYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
+R+ +P C H + + ++C C+ C C H
Sbjct: 115 PERKCDLPMCEEHEDERINIYCLNCEIPTCSLCKVFGAHKD 155
>gi|260811382|ref|XP_002600401.1| hypothetical protein BRAFLDRAFT_237372 [Branchiostoma floridae]
gi|229285688|gb|EEN56413.1| hypothetical protein BRAFLDRAFT_237372 [Branchiostoma floridae]
Length = 67
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+DF+E FLTC C+ + P++LPC HT C CL A Q L CP CR Q
Sbjct: 9 DDFDEQFLTCSICMRYF----QDPRVLPCLHTFCRECLKEWATKQQ----PLECPTCRTQ 60
Query: 84 ITIPRGG 90
+++P G
Sbjct: 61 VSLPDQG 67
>gi|17509101|ref|NP_491266.1| Protein T20F5.6 [Caenorhabditis elegans]
gi|351060151|emb|CCD67781.1| Protein T20F5.6 [Caenorhabditis elegans]
Length = 794
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-TLRCPICREQ----IT 85
L+CG C ++ G+ PK+ PC HT+CL C+ ++ ++T G T+ CP CR+ +T
Sbjct: 114 LSCGICYDPFNTGKRIPKVFPCGHTICLQCIKKLLNTRTFLGGNTVICPSCRQNTRYSLT 173
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETC-DTVFCLQCTGGS 144
P +P +F + LL+ +++ P E + C C TV ++ T S
Sbjct: 174 TP---ADKIPTNFCIQSLLEQRQQEKSTKEP--------EAVKCTECHTTVSAIEATTCS 222
Query: 145 NHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
+ + SE + IKR E L+ ++ C+ N
Sbjct: 223 DETCQKEISEEELKNVD-KIKRPKETLICRS--CIETN 257
>gi|74006447|ref|XP_548857.2| PREDICTED: midline-1 isoform 2 [Canis lupus familiaris]
Length = 667
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|149744233|ref|XP_001488148.1| PREDICTED: midline-1 isoform 1 [Equus caballus]
Length = 667
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|2589223|gb|AAB83986.1| ring finger protein [Mus musculus]
Length = 667
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|340723937|ref|XP_003400343.1| PREDICTED: hypothetical protein LOC100643462 [Bombus terrestris]
Length = 1787
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|327285380|ref|XP_003227412.1| PREDICTED: e3 ubiquitin-protein ligase TRIM63-like [Anolis
carolinensis]
Length = 354
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRET--------GTLRC 77
E L C CL M+ +LPC H +C C + I AA+ +T G RC
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWQTSRGTTISGGRFRC 74
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFCE 130
P CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 PSCRHEVILDRHGVYGLQRNLLVENIIDIYKQEYSSRPLKKGNHPMCKDHEDEKINIYCL 134
Query: 131 TCDTVFCLQCTGGSNHSS 148
TC+ C C H
Sbjct: 135 TCEVPTCSMCKVFGAHKD 152
>gi|158255866|dbj|BAF83904.1| unnamed protein product [Homo sapiens]
Length = 667
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|426244497|ref|XP_004016058.1| PREDICTED: tripartite motif-containing protein 59-like [Ovis aries]
Length = 402
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + TG
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----TGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCE 130
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 51 RIPLKCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCL 110
Query: 131 TCDTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 111 LDKKLVCGHCLTIGQHHGHPIYD 133
>gi|307175914|gb|EFN65727.1| RING finger protein 207 [Camponotus floridanus]
Length = 929
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTCG C Y P LL C HT C C+ GT++CPIC +Q + + G
Sbjct: 29 LTCGICHDYYK----EPCLLSCFHTFCARCIHGPHID-----GTIKCPICGQQTQL-KDG 78
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQE---LLFCETCDTVFCLQC 140
PP L++QL++L + + P C+ + ++ + FC TC C C
Sbjct: 79 AQLPPPDQLIHQLVELANSEN----PPCANCDKRDKSTMFFCTTCGQALCTHC 127
>gi|410971065|ref|XP_003991994.1| PREDICTED: tripartite motif-containing protein 59 [Felis catus]
Length = 403
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|426395135|ref|XP_004063831.1| PREDICTED: midline-1 [Gorilla gorilla gorilla]
Length = 610
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|12621082|ref|NP_075216.1| midline-1 [Rattus norvegicus]
gi|22653809|sp|P82458.1|TRI18_RAT RecName: Full=Midline-1; AltName: Full=Tripartite motif-containing
protein 18
gi|5919217|gb|AAD56247.1|AF186461_1 ring finger protein Fxy [Rattus norvegicus]
gi|149035925|gb|EDL90592.1| midline 1 [Rattus norvegicus]
Length = 667
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|301758531|ref|XP_002915112.1| PREDICTED: LOW QUALITY PROTEIN: midline-1-like [Ailuropoda
melanoleuca]
Length = 667
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|348543806|ref|XP_003459373.1| PREDICTED: tripartite motif-containing protein 54-like [Oreochromis
niloticus]
Length = 335
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCL------------SRIAASQTRETGTL 75
E L C CL M+ +LPC H +C C SR ++S T G
Sbjct: 5 EKQLICPVCLEMFS---KPVVILPCQHNLCRKCANDIFQSANPLWHSRGSSSATASGGRF 61
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFC 129
RCP CR ++ + R GV L + LV ++D+ +Q ++ C H +++ ++C
Sbjct: 62 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYRQQDMKPEQQQQQLMCEEHEDEKINIYC 121
Query: 130 ETCDTVFCLQCTGGSNH 146
+C T C C H
Sbjct: 122 LSCQTPTCSMCKVFGQH 138
>gi|127138778|ref|NP_898974.1| midline-1 [Mus musculus]
gi|127139933|ref|NP_034927.2| midline-1 [Mus musculus]
gi|342187073|sp|O70583.2|TRI18_MOUSE RecName: Full=Midline-1; AltName: Full=Midin; AltName:
Full=Tripartite motif-containing protein 18
Length = 680
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|291230680|ref|XP_002735294.1| PREDICTED: tripartite motif-containing 2-like [Saccoglossus
kowalevskii]
Length = 227
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E +E FLTC CL Y +H ++LPC HT C CL+ S ++ G L C +CR+
Sbjct: 10 ERIDEQFLTCTICLERY---KH-ARVLPCQHTFCEKCLT----SWVKQHGGLNCAVCRQP 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQ 110
+ LPPS L+N ++ L+ +
Sbjct: 62 WQAWASNIQQLPPSLLINGIVRLLEER 88
>gi|2995449|emb|CAA75113.1| midline 1 protein [Mus musculus]
Length = 680
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|449494210|ref|XP_002197496.2| PREDICTED: tripartite motif-containing protein 55 [Taeniopygia
guttata]
Length = 441
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 23/153 (15%)
Query: 5 MSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
MS++LS S E ++ D E L C CL M+ +LPC H +C C S I
Sbjct: 1 MSTSLSYKSFSKEQQTM---DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDI 54
Query: 65 -----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---- 109
+ G RCP CR ++ + R GV L + LV ++D+ +
Sbjct: 55 FQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTR 114
Query: 110 -QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+R+ P C H + + ++C C+ C C
Sbjct: 115 PERKCDQPMCEEHEDERINIYCLNCEMPTCSLC 147
>gi|313214187|emb|CBY42678.1| unnamed protein product [Oikopleura dioica]
Length = 387
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 17/138 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG----TLRCPI 79
ED E LTC CL ++ +LPC H +C C + R G +CP
Sbjct: 8 EDI-ERLLTCPVCLDVF---TQPVIILPCQHNLCRKCAEECYDRRGRVVGLSGGKFQCPT 63
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ--------RRHIIPKCSTHNSQEL-LFCE 130
CR ++ + R GV +LP + LV L+++ + + + +P C H + + +FC
Sbjct: 64 CRYEVMVDRHGVYSLPRNLLVENLIEMYAVKPIREPTPPPANRVPLCEDHEDERINVFCL 123
Query: 131 TCDTVFCLQCTGGSNHSS 148
+C C C H +
Sbjct: 124 SCQKPTCSMCKVFGKHQN 141
>gi|291399540|ref|XP_002716174.1| PREDICTED: tripartite motif-containing 63-like [Oryctolagus
cuniculus]
Length = 360
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS----QTRETGTL-------R 76
E L C CL M+ +LPC H +C C + I + T +GT+ R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRSGTVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVVMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+T C C H +
Sbjct: 135 LTCETPTCSMCKVFGAHQA 153
>gi|156402654|ref|XP_001639705.1| predicted protein [Nematostella vectensis]
gi|156226835|gb|EDO47642.1| predicted protein [Nematostella vectensis]
Length = 711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 28/119 (23%)
Query: 47 PKLLPCSHTVCLHCLSR---IAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQL 103
PK+L C HT C CL + A T ++ CP+CR+ IP GV +LP +FL+N
Sbjct: 26 PKILDCLHTFCQKCLGTHDILGAG----TNSIVCPLCRKPTPIPESGVESLPSNFLLNNA 81
Query: 104 LDLMS--------------------RQRRHIIPKCSTHNSQELLF-CETCDTVFCLQCT 141
LD +S Q H C H + +F C C+ + C +CT
Sbjct: 82 LDQLSVKSSKEYILHCTNCEDASDATQTLHRPSFCMQHKDEMFMFYCLECEGLICRECT 140
>gi|440908358|gb|ELR58382.1| Tripartite motif-containing protein 55 [Bos grunniens mutus]
Length = 548
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 32/152 (21%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQVE 58
Query: 65 ----------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR----- 109
+ G RCP CR ++ + R G+ L + LV ++D+ +
Sbjct: 59 QASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRP 118
Query: 110 QRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+++ P C H + + ++C C+ C C
Sbjct: 119 EKKSDQPMCEEHEDERINIYCLNCEVPTCSLC 150
>gi|354490307|ref|XP_003507300.1| PREDICTED: midline-1-like isoform 2 [Cricetulus griseus]
Length = 629
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|118404880|ref|NP_001072557.1| tripartite motif containing 63, E3 ubiquitin protein ligase
[Xenopus (Silurana) tropicalis]
gi|115292064|gb|AAI22074.1| tripartite motif-containing 63 [Xenopus (Silurana) tropicalis]
Length = 348
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET---GTLRCPI 79
E L C CL M++ +LPC H +C C + + + TR + G RCP
Sbjct: 18 EKQLICPICLEMFNK---PVVILPCQHNLCRKCANDVFQAGNPYWSTRSSVSGGRFRCPT 74
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQEL-LFCETC 132
CR ++ + R GV L + LV ++D+ + +++ P C H +++ ++C +C
Sbjct: 75 CRHEVILDRHGVYGLQRNLLVENIIDIYKQDCTSRPEKKENHPMCEKHEDEKINIYCLSC 134
Query: 133 DTVFCLQC 140
C C
Sbjct: 135 QVATCSMC 142
>gi|363742252|ref|XP_424369.3| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Gallus gallus]
Length = 351
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET-----GTLRC 77
E L C CL M+ +LPC H +C C + I + Q+R + G RC
Sbjct: 18 EKQLLCPICLEMFS---KPVVILPCQHNLCRKCANDIFQAANPYWQSRGSSIISGGRFRC 74
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCET 131
P CR ++ + R GV L + LV ++D+ ++ ++ P C H + + ++C T
Sbjct: 75 PTCRHEVLLDRHGVYGLQRNLLVENIIDIYKQEFSRPLKKGEHPMCKEHEDERINIYCVT 134
Query: 132 CDTVFCLQCTGGSNHSS 148
C+ C C H
Sbjct: 135 CEVPTCSMCKVFGAHKD 151
>gi|395840501|ref|XP_003793095.1| PREDICTED: midline-1 isoform 4 [Otolemur garnettii]
Length = 629
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDTNTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|86438366|gb|AAI12760.1| Tripartite motif-containing 55 [Bos taurus]
Length = 413
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQMNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|403265974|ref|XP_003925180.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Saimiri boliviensis boliviensis]
Length = 600
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
+F E LTC C +++ P++LPCSHT C +CL + + L+CP
Sbjct: 200 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCP 254
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I I G+ +LP +F + +++ ++ I C H Q L ++C + C
Sbjct: 255 NCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVC 314
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 315 GHCLTIGEHHGHPIDD 330
>gi|395526989|ref|XP_003765636.1| PREDICTED: midline-1 isoform 2 [Sarcophilus harrisii]
Length = 629
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNTMTSSEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|392340794|ref|XP_003754170.1| PREDICTED: RING finger protein 223-like [Rattus norvegicus]
gi|392348585|ref|XP_003750143.1| PREDICTED: RING finger protein 223-like [Rattus norvegicus]
Length = 255
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGTLRCPICREQ 83
S L C C YD TPK L C+H CL CL+R+AA+Q RE + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPAGRPGRE--AVPCPFCRQP 104
Query: 84 ITIPRGGVAAL 94
T+P G AL
Sbjct: 105 TTVPAAGAPAL 115
>gi|354490305|ref|XP_003507299.1| PREDICTED: midline-1-like isoform 1 [Cricetulus griseus]
gi|344241726|gb|EGV97829.1| Midline-1 [Cricetulus griseus]
Length = 667
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|149744237|ref|XP_001488161.1| PREDICTED: midline-1 isoform 2 [Equus caballus]
Length = 700
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|351701847|gb|EHB04766.1| Midline-1 [Heterocephalus glaber]
Length = 667
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERTFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|348554271|ref|XP_003462949.1| PREDICTED: midline-1-like [Cavia porcellus]
Length = 788
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 126 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR 181
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 182 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 241
Query: 131 TCD 133
CD
Sbjct: 242 FCD 244
>gi|297299506|ref|XP_001100542.2| PREDICTED: tripartite motif-containing protein 55-like [Macaca
mulatta]
Length = 455
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|432910810|ref|XP_004078536.1| PREDICTED: RING finger protein 183-like [Oryzias latipes]
Length = 299
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
C C C YD TPK+L C HT CL CL+RI + E L CP+CRE
Sbjct: 97 CSICFCSYDNIFKTPKVLACGHTFCLECLARINVTSA-ELKNLPCPVCRE 145
>gi|148232016|ref|NP_001091177.1| uncharacterized protein LOC100036938 [Xenopus laevis]
gi|120538018|gb|AAI29691.1| LOC100036938 protein [Xenopus laevis]
Length = 356
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET---GTLRCPI 79
E L C CL M++ +LPC H +C C + + + TR + G RCP
Sbjct: 18 EKQLICPICLEMFN---KPVVILPCQHNLCRKCANDVFQAGNPYWSTRTSASGGRFRCPT 74
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQEL-LFCETC 132
CR ++ + R GV L + LV ++D+ + +++ P C H +++ ++C +C
Sbjct: 75 CRHEVILDRHGVYGLQRNLLVENIIDIYKQECSSRPEKKENHPMCEKHEDEKINIYCLSC 134
Query: 133 DTVFCLQC 140
C C
Sbjct: 135 QVATCSMC 142
>gi|443702929|gb|ELU00752.1| hypothetical protein CAPTEDRAFT_224213 [Capitella teleta]
Length = 647
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 29 SFLTCGTCLCMYDGGEHT-PKLLPCSHTVCLHCLSRIAASQTRETG-----TLRCPICRE 82
+L C C G E T PK+LPC H+ C CL + R++G CPICR
Sbjct: 22 DYLHCPAC-----GDEFTSPKILPCLHSFCFECLD----TSLRDSGIGNGQAFLCPICRA 72
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQC 140
Q +P GV AL + + L D + R+ +C +S++ C C+ C C
Sbjct: 73 QCVVPMRGVRALKSNIFLVTLQDFVDRKTLDKDQRCEVCDSEKKARRKCIECNDWLCSHC 132
Query: 141 TGGSNHSSTSGDSEHTIIPFS 161
+ H +HT++ S
Sbjct: 133 C--AMHVKVKLTKDHTLVEAS 151
>gi|395840495|ref|XP_003793092.1| PREDICTED: midline-1 isoform 1 [Otolemur garnettii]
gi|395840497|ref|XP_003793093.1| PREDICTED: midline-1 isoform 2 [Otolemur garnettii]
gi|395840499|ref|XP_003793094.1| PREDICTED: midline-1 isoform 3 [Otolemur garnettii]
Length = 667
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDTNTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|334346775|ref|XP_003341852.1| PREDICTED: midline-1 isoform 2 [Monodelphis domestica]
Length = 629
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNTMTSSEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|338728205|ref|XP_003365635.1| PREDICTED: tripartite motif-containing protein 55 [Equus caballus]
Length = 241
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|355726134|gb|AES08775.1| tripartite motif-containing 59 [Mustela putorius furo]
Length = 320
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------- 74
N+ED LTC C +++ P++LPCSHT C +CL + + +G
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQA----SGNFYIWRPL 50
Query: 75 ---LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCE 130
L+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 51 RIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCL 110
Query: 131 TCDTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 111 LDKKLVCGHCLTIGQHHGHPIDD 133
>gi|402861071|ref|XP_003894931.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Papio
anubis]
gi|383417701|gb|AFH32064.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417703|gb|AFH32065.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417705|gb|AFH32066.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 403
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|395526987|ref|XP_003765635.1| PREDICTED: midline-1 isoform 1 [Sarcophilus harrisii]
Length = 667
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNTMTSSEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|147907226|ref|NP_001086683.1| tripartite motif containing 63, E3 ubiquitin protein ligase
[Xenopus laevis]
gi|50414796|gb|AAH77305.1| Rnf30-prov protein [Xenopus laevis]
Length = 356
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET---GTLRCPI 79
E L C CL M++ +LPC H +C C + + + TR + G RCP
Sbjct: 18 EKQLICPICLEMFNK---PVVILPCQHNLCRKCANDVFQAGNPYWSTRSSVSGGRFRCPT 74
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQEL-LFCETC 132
CR ++ + R GV L + LV ++D+ + +++ P C H +++ ++C +C
Sbjct: 75 CRHEVILDRHGVYGLQRNLLVENIIDIYKQDCTSRPEKKENHPMCEKHEDEKINIYCLSC 134
Query: 133 DTVFCLQC 140
C C
Sbjct: 135 QVATCSMC 142
>gi|291224495|ref|XP_002732239.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 777
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-LRCPICRE 82
E+ +E+FL CG C Y K+LPC H+ C HCL ++ +TG + CP+CR
Sbjct: 12 EEIDETFLNCGVCSERYSNA----KVLPCQHSFCEHCLVKLV----EKTGQPIHCPLCRR 63
Query: 83 QITIPRGGVAALPPSFLVNQL 103
+ I V+ LP ++ +N++
Sbjct: 64 KHYIK---VSDLPSNYFINEI 81
>gi|332214604|ref|XP_003256425.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Nomascus leucogenys]
gi|332214606|ref|XP_003256426.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Nomascus leucogenys]
gi|332214608|ref|XP_003256427.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Nomascus leucogenys]
gi|332214612|ref|XP_003256429.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Nomascus leucogenys]
gi|332214614|ref|XP_003256430.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Nomascus leucogenys]
gi|332214618|ref|XP_003256432.1| PREDICTED: tripartite motif-containing protein 59 isoform 8
[Nomascus leucogenys]
Length = 403
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|334182750|ref|NP_001185058.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
gi|332192012|gb|AEE30133.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
Length = 1805
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSYDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|326932978|ref|XP_003212587.1| PREDICTED: e3 ubiquitin-protein ligase TRIM63-like [Meleagris
gallopavo]
Length = 352
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET-----GTLRC 77
E L C CL M+ +LPC H +C C + I + Q+R + G RC
Sbjct: 18 EKQLLCPICLEMFS---KPVVILPCQHNLCRKCANDIFQAANPYWQSRGSSIISGGRFRC 74
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFCE 130
P CR ++ + R GV L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 75 PTCRHEVLLDRHGVYGLQRNLLVENIIDIYKQEFSSRPLKKGEHPMCKEHEDERINIYCV 134
Query: 131 TCDTVFCLQCTGGSNHSS 148
TC+ C C H
Sbjct: 135 TCEVPTCSMCKVFGAHKD 152
>gi|126336892|ref|XP_001365220.1| PREDICTED: midline-1 isoform 1 [Monodelphis domestica]
Length = 667
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNTMTSSEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|443708903|gb|ELU03822.1| hypothetical protein CAPTEDRAFT_223323 [Capitella teleta]
Length = 886
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y P++LPC HT C CL + + R+ ++CP CR++ +
Sbjct: 33 ERLLTCAICLERY----TNPRILPCQHTFCRSPCLDGLVDLRNRK---VKCPECRKEHYV 85
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPK---------CSTHNSQELLFCETCDTVFC 137
P G PP+ V LDL + QR + C + +S L C CD + C
Sbjct: 86 PPTGAGGFPPNITVANFLDLPA-QRGGPTQEPLTDSMCRVCESESS--LQKCSHCDKMIC 142
Query: 138 LQC 140
C
Sbjct: 143 EGC 145
>gi|355559905|gb|EHH16633.1| hypothetical protein EGK_11948 [Macaca mulatta]
gi|380811990|gb|AFE77870.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 402
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|73999169|ref|XP_858630.1| PREDICTED: tripartite motif-containing protein 55 isoform 2 [Canis
lupus familiaris]
Length = 241
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|390360805|ref|XP_003729776.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 308
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 24/184 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL ++ P LL C HT C CL + R + CP+C++ + +
Sbjct: 13 LACPMCLEVF----KAPTLLACGHTFCKECLDKYDKKH-RGQDFMECPLCKKNTKLGKNR 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPK----CSTHNS-QELLFCETCDTVFCLQCTGGSN 145
VA L P+F V L + + + K CS H+ + + CE C CL C +
Sbjct: 68 VAGLSPNFSVKGLKEELHVHLNKVNGKSSEYCSLHSKVYKDILCEVCKEFICLTCLFDKH 127
Query: 146 HSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRR 205
+ E + + R S L+K +E E+K+ ++ S A ++R
Sbjct: 128 DGHSFKKKEEFVA--ELNTNRDS---LFKQSE---------EKKTQIKKSITNAKQHMRV 173
Query: 206 RGAH 209
+H
Sbjct: 174 MNSH 177
>gi|410987223|ref|XP_003999904.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Felis
catus]
Length = 241
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P C H + + ++C C+ C C
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLC 147
>gi|194386252|dbj|BAG59690.1| unnamed protein product [Homo sapiens]
Length = 617
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD 133
IT+ + G+ L + + ++D + P + S E + C+ CD
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVS-GPNSPSETSAEKVLCQFCD 111
>gi|3462503|gb|AAC32998.1| midline 1 cerebellar isoform 1 [Homo sapiens]
Length = 484
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|355746928|gb|EHH51542.1| hypothetical protein EGM_10939 [Macaca fascicularis]
Length = 403
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|334312294|ref|XP_001375710.2| PREDICTED: tripartite motif-containing protein 55-like [Monodelphis
domestica]
Length = 569
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 22/143 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC------LSRIAASQTRET-----G 73
D E L C CL M+ +LPC H +C C + R+ Q+R T G
Sbjct: 18 DTLERQLICPICLEMFS---KPVVILPCQHNLCRKCANDIFQVPRVFPFQSRGTTLGSSG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQR-------RHIIPKCSTHNSQEL 126
RCP CR ++ + R GV L + LV ++D+ ++ + P C H +++
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESASPKPLLKPECPTCEEHEDEKI 134
Query: 127 -LFCETCDTVFCLQCTGGSNHSS 148
++C TC C C H S
Sbjct: 135 NIYCVTCRVPTCSLCKVFGEHQS 157
>gi|300797197|ref|NP_001180209.1| midline-1 isoform 5 [Homo sapiens]
Length = 451
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|291222677|ref|XP_002731342.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 618
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRC 77
S+ + +E FL C CL Y+ PK+LPC H+ C CL R+ G L C
Sbjct: 2 AASLTIDKIDEQFLRCSVCLERYN----KPKVLPCQHSFCECCL----IQWKRQRGRLDC 53
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMS 108
P CR+ + L P+F++N ++++M
Sbjct: 54 PTCRDPTN---KTIEQLSPNFMINGVIEIME 81
>gi|345800570|ref|XP_546722.3| PREDICTED: RING finger protein 223 [Canis lupus familiaris]
Length = 231
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
+S S S + + S + S L C C YD TPK L C+H CL CL+
Sbjct: 1 MSAPSRTSPTAPAPRSPSTPGSEKVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLA 60
Query: 63 RIAASQT--RETG-TLRCPICREQITIPRGGVAAL 94
R+AA+Q R G + CP CR+ +P G AL
Sbjct: 61 RLAAAQPTGRPGGEAVPCPFCRQPTAVPAAGAPAL 95
>gi|335299840|ref|XP_003358702.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Sus
scrofa]
gi|335299842|ref|XP_001925596.3| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Sus
scrofa]
Length = 403
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL I + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLEDILQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGDSEHTII 158
+ C C T G +H D + I
Sbjct: 115 LVCGHCLTIGQHHGHPIDDLQSAYI 139
>gi|332860247|ref|XP_001141973.2| PREDICTED: midline-1 isoform 2 [Pan troglodytes]
Length = 451
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|426235582|ref|XP_004011759.1| PREDICTED: tripartite motif-containing protein 55 isoform 3 [Ovis
aries]
Length = 241
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEDERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|355390248|ref|NP_001038490.2| tripartite motif-containing protein 54 [Danio rerio]
Length = 359
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL ++ +LPC H +C C + + A++ G R
Sbjct: 21 ERQLICPICLEIFS---KPVVILPCQHNLCRKCANDVFQASNPLWQNRASTTVSTGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLM-SRQRRHIIPK-------CSTHNSQEL-L 127
CP CR ++ + R GV L + LV ++D+ S R ++PK C H +++ +
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKSESTRPLLPKTEQQQLMCDQHEEEKINI 137
Query: 128 FCETCDTVFCLQC 140
+C TC+T C C
Sbjct: 138 YCLTCETPTCSMC 150
>gi|443692922|gb|ELT94413.1| hypothetical protein CAPTEDRAFT_222732 [Capitella teleta]
Length = 516
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICR 81
Y ++ E + C C +Y +P LLP C HT+C +C + E LRCP CR
Sbjct: 101 YSNYRE--MECPVCFEVY----KSPLLLPGCGHTICSNCAELLVT----EGNFLRCPECR 150
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I R GV +LP + + + +D + + C H + L+C+TC+ CL+C
Sbjct: 151 -LIYQLRRGVKSLPKNVALQRTIDEQMQINSRRVSMCGEHPDDAISLYCKTCEKAICLKC 209
>gi|291233693|ref|XP_002736786.1| PREDICTED: tripartite motif protein-like, partial [Saccoglossus
kowalevskii]
Length = 739
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
N+ L C C +YD TPK LPC HT C+ CL+ +CP C+++ I
Sbjct: 15 NKVPLKCSLCKHVYDVTNRTPKYLPCLHTFCVLCLAGHVGK------IFQCPGCKQKNNI 68
Query: 87 PRGGVAALPPSFLV---NQLLDLMSRQRRHIIPKCST--HNSQELLF--CETCDTVFCLQ 139
P+ G+ +P +F NQLL + + +P C + N+Q L C C+ C
Sbjct: 69 PK-GIDLIPTNFAFLNYNQLLCHKDQIKHSKLPTCQSCCRNNQTLNVSHCSDCEAYLCQS 127
Query: 140 CTGGSNHSSTSGDSEHTI 157
C NH S H +
Sbjct: 128 C--HDNHIHIESLSTHEV 143
>gi|321468757|gb|EFX79740.1| hypothetical protein DAPPUDRAFT_304337 [Daphnia pulex]
Length = 1319
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICRE 82
E F++ LTC CL Y PKLLPC H+ C+ C+ + TR+ ++CP CR
Sbjct: 2 EQFDQ-LLTCCVCLDRY----RNPKLLPCQHSFCMEPCMEGLINYVTRQ---VKCPECRA 53
Query: 83 QITIPRGGVAALPPSFLVNQLLDL 106
+ IP G+AA P + + + L+L
Sbjct: 54 EHRIPYQGIAAYPTNVTLQRFLEL 77
>gi|297672397|ref|XP_002814288.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Pongo
abelii]
Length = 403
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|390342245|ref|XP_003725621.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 251
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 81/204 (39%), Gaps = 30/204 (14%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL ++ L+ C HT C CL R S RE + CP+CR+
Sbjct: 16 LACPLCLDVF----KDATLVGCGHTFCRRCLKRYEISH-RELDHMVCPVCRKITKWQDNR 70
Query: 91 VAALPPSFLVNQLLDLM-------SRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCT 141
V LP + VN L+D + SR RR I KC+ Q +C+ CD C C
Sbjct: 71 VDDLPSNQAVNDLIDELHSKFGGPSRPRRDI--KCTACKLQVKASSYCKACDAFMCELCL 128
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKR----------MSEILLYKANECVSKNKVCPERKSN 191
+ S+ + HT+ IK M E + K +E + + C + +
Sbjct: 129 ESHQNMSSVFEG-HTVQSLQDVIKNINVSCPTQDDMEEDMQLKVDELMQQ---CRAKVAK 184
Query: 192 LRPSAHKADAYVRRRGAHTQTPPL 215
L+ +A + + +R H L
Sbjct: 185 LKDNADEDEVEEQRSQIHAAMQKL 208
>gi|443692325|gb|ELT93942.1| hypothetical protein CAPTEDRAFT_89730, partial [Capitella teleta]
Length = 190
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQI 84
L C C YD +PK+L C+HT C CL ++ ++ G + CP CRE
Sbjct: 10 DLLHCMICFEQYD----SPKMLRCAHTFCAECLQGYYSTYQQQKRAVPGKIPCPTCRELT 65
Query: 85 TIPRGGVAALPPSFLVNQL------LDLMSRQRRHIIPKCSTH--NSQELLFCETCDTVF 136
T+P GV+ L F V ++ +++ R C + SQ ++C C +
Sbjct: 66 TLPSNGVSGLRNDFKVQKIEEMFKSMNIRDRANSRSCDSCKSQRKTSQAKVYCAGCSMNY 125
Query: 137 CLQCTGGSN 145
C C N
Sbjct: 126 CDSCMKKHN 134
>gi|410928446|ref|XP_003977611.1| PREDICTED: tripartite motif-containing protein 55-like [Takifugu
rubripes]
Length = 484
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 16/116 (13%)
Query: 49 LLPCSHTVCLHCLSRIAASQTRET---GTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
+LPC H +C C +++ ++T T G RCP CR+++ + R GV L + LV ++D
Sbjct: 47 ILPCQHNLCRKCANQLYQARTTMTVNSGHFRCPSCRQEVVLDRHGVYGLQRNLLVESIID 106
Query: 106 LMSRQRRHIIP------------KCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
+ +++ + I +CS H ++ + ++C TC + C C H S
Sbjct: 107 IYNQEISNNISCVPSPVSPDQPLRCSIHKTERVNIYCLTCGLLTCSLCKVFGAHQS 162
>gi|186478734|ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast protein transport factor
[Arabidopsis thaliana]
gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast transport factor protein
[Arabidopsis thaliana]
gi|110739333|dbj|BAF01579.1| hypothetical protein [Arabidopsis thaliana]
gi|332192014|gb|AEE30135.1| zinc ion binding protein [Arabidopsis thaliana]
Length = 811
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSYDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|197101225|ref|NP_001127148.1| midline-1 [Pongo abelii]
gi|55725161|emb|CAH89447.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVPLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|395854858|ref|XP_003799895.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Otolemur garnettii]
Length = 358
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSMSLSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHQA 153
>gi|300797153|ref|NP_001180207.1| midline-1 isoform 3 [Homo sapiens]
Length = 540
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|291243237|ref|XP_002741510.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 735
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK LPC HTVC CL ++ + G + CP+C E++ IP GV P + L
Sbjct: 32 PKFLPCLHTVCRDCLVKVYGGR---RGPINCPVCSEKVPIPSNGVDGFPYNVL------- 81
Query: 107 MSRQRRHIIPKCSTHNSQELLFC-----ETCDTVFCLQCT 141
RR I S+E++ C E+C +C QC+
Sbjct: 82 --EIRREIRSVREGQESEEIM-CQNCSDESCAESWCHQCS 118
>gi|383857485|ref|XP_003704235.1| PREDICTED: RING finger protein nhl-1-like isoform 2 [Megachile
rotundata]
Length = 1297
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|307166849|gb|EFN60779.1| RING finger protein nhl-1 [Camponotus floridanus]
Length = 1303
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|300797175|ref|NP_001180208.1| midline-1 isoform 4 [Homo sapiens]
Length = 489
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|34878852|ref|NP_908975.1| tripartite motif-containing protein 55 isoform 4 [Homo sapiens]
gi|332251435|ref|XP_003274851.1| PREDICTED: tripartite motif-containing protein 55 isoform 4
[Nomascus leucogenys]
gi|332826202|ref|XP_003311787.1| PREDICTED: tripartite motif-containing protein 55 [Pan troglodytes]
gi|426359815|ref|XP_004047157.1| PREDICTED: tripartite motif-containing protein 55 isoform 4
[Gorilla gorilla gorilla]
gi|23954320|emb|CAC81835.1| RING finger protein 29 [Homo sapiens]
Length = 241
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|383857483|ref|XP_003704234.1| PREDICTED: RING finger protein nhl-1-like isoform 1 [Megachile
rotundata]
Length = 1233
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|397468748|ref|XP_003806033.1| PREDICTED: uncharacterized protein LOC100989971 [Pan paniscus]
Length = 600
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 10 STNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT 69
S+ +++ + + S L C C YD TPK L C+H CL CL+R+AA+Q
Sbjct: 503 SSTASMPRSPGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQP 562
Query: 70 --RETG-TLRCPICREQITIPRGGVAAL 94
R G + CP CR+ +P G AL
Sbjct: 563 VGRPGGEAVPCPFCRQPTAVPPAGAPAL 590
>gi|156360541|ref|XP_001625086.1| predicted protein [Nematostella vectensis]
gi|156211901|gb|EDO32986.1| predicted protein [Nematostella vectensis]
Length = 225
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC C+ ++ P++LPC H+ C CL +A + G L CP+C+ + I
Sbjct: 10 EDEVTCSLCIEHFND----PRVLPCFHSFCRLCLEELAV-HSEGRGKLACPLCKAEFQIS 64
Query: 88 RGGVAALPPSFLVNQLLD-LMSRQRRHIIPKCSTHNSQELL--FCETCDTVFCLQCTGGS 144
+ V +L +F++N +L L+ P C + +S E C CD C QC S
Sbjct: 65 QADVPSLKVNFMINSILSVLLLTSEDSKKPVCESCDSGEPAQGRCNECDHFVCEQCI--S 122
Query: 145 NHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
H HTI+ IK + + KA+ C
Sbjct: 123 IHKRFRPVQHHTILSLD-EIKSGKLLAMSKASFC 155
>gi|47219203|emb|CAG11221.1| unnamed protein product [Tetraodon nigroviridis]
Length = 464
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICR 81
D E L+C CL M+ +LPC H +C C S + S+ G RCP CR
Sbjct: 17 DSLEKQLSCPICLDMFT---KPVVILPCQHNLCRSCASDLYDSRNPYRFSGGVFRCPTCR 73
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQ---------------RRHIIPKCSTHNSQEL 126
++ + R GV L + LV ++DL +Q + P C H +++
Sbjct: 74 FEVVLDRHGVHGLQRNLLVENIIDLYKQQQELSGSGNTESKLKTKEANEPMCHEHEGEKI 133
Query: 127 -LFCETCDTVFCLQCTGGSNHSS 148
++C TC C C H
Sbjct: 134 NIYCVTCQVPTCSLCKVFGQHKD 156
>gi|344287112|ref|XP_003415299.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Loxodonta africana]
Length = 472
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I + S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRSGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLKKGGHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>gi|118100004|ref|XP_415709.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Gallus gallus]
Length = 492
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D E L C CL ++ P +L C H+ C C+ ++ + L CP+CR+ +
Sbjct: 8 DNLEDQLLCPICLEVF----KEPLMLQCGHSYCKSCVLSLSGELDEQ---LLCPVCRKSV 60
Query: 85 TIPRGGVAALPPSFLVNQLLD-LMSRQRRHIIPK-CSTHNSQELLFCETCDTVFCLQCTG 142
+A PP+ + ++++ L SR P+ C TH++ LFCE V C C
Sbjct: 61 D-----CSASPPNVTLARIIEALQSRGETEPTPESCPTHDNPLSLFCEADREVICGLCGT 115
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSE---ILLYKANEC 178
NH +H I P S A RM E +LL + C
Sbjct: 116 IGNH------KQHKITPISTAYCRMKEELSVLLTDVHRC 148
>gi|221042530|dbj|BAH12942.1| unnamed protein product [Homo sapiens]
Length = 395
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|109129890|ref|XP_001093390.1| PREDICTED: midline-1-like isoform 6 [Macaca mulatta]
gi|109129892|ref|XP_001093502.1| PREDICTED: midline-1-like isoform 7 [Macaca mulatta]
gi|109129894|ref|XP_001093623.1| PREDICTED: midline-1-like isoform 8 [Macaca mulatta]
Length = 667
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDAHTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|410909946|ref|XP_003968451.1| PREDICTED: tripartite motif-containing protein 59-like [Takifugu
rubripes]
Length = 420
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C ++ P++LPCSHT C CL + + L+CP CR
Sbjct: 5 EEDLTCSVCYSLFS----DPRVLPCSHTFCKTCLDNLLQVSNNYSIWRPLRLPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ +P GV ALP + + +++ P C H+ Q L ++C + C C
Sbjct: 61 SMVELPPTGVEALPSNVSLRAIIEKYQSDNEPRPPSCQEHHRQPLNMYCIQDRQLICGLC 120
Query: 141 TGGSNHSSTSGDSEHTIIPFSIAI---KRMSEILLYKANE 177
H H I A KR +LL K +E
Sbjct: 121 LTVGQHQG------HPIDDLQAAFTREKRTPSLLLAKLSE 154
>gi|328779273|ref|XP_391967.4| PREDICTED: RING finger protein nhl-1-like [Apis mellifera]
Length = 1281
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|344288613|ref|XP_003416041.1| PREDICTED: midline-1 isoform 2 [Loxodonta africana]
Length = 629
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSTEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|321471409|gb|EFX82382.1| hypothetical protein DAPPUDRAFT_316826 [Daphnia pulex]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
E +TC CL YD G PK L CSHT+CL C I R T+ CP CR
Sbjct: 10 EELVTCNICLNQYDEGIRKPKFLQCSHTICLECFQAI-----RNRYTIACPFCR 58
>gi|379642601|ref|NP_001243831.1| tripartite motif-containing protein 59 [Equus caballus]
Length = 403
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|426342715|ref|XP_004037980.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Gorilla gorilla gorilla]
Length = 431
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 20 SINYEDFN-ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---- 74
IN E N E LTC C +++ P++LPCSHT C +CL I +
Sbjct: 24 EINKEMHNFEEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLR 79
Query: 75 --LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCET 131
L+CP CR I GV +LP +F + +++ ++ I C H Q L ++C
Sbjct: 80 IPLKCPNCRSITEIAPTGVESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLL 139
Query: 132 CDTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 140 DKKLVCGHCLTIGQHHGHPIDD 161
>gi|351697846|gb|EHB00765.1| E3 ubiquitin-protein ligase TRIM63 [Heterocephalus glaber]
Length = 380
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHQA 153
>gi|441671978|ref|XP_003271568.2| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Nomascus leucogenys]
Length = 351
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSASMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>gi|291236039|ref|XP_002737949.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 503
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +E L C C Y KLLPC H+ C CL + S++ G + CP+CR +
Sbjct: 11 EELDEDLLNCEICSDRYTNA----KLLPCQHSFCEDCLVTM-VSRSGLPGVVICPLCRRK 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMS-RQRRHIIP-KCSTHNSQELLF-CETCDTVFCLQC 140
IP GG++ + + +NQL+++ + R P KC+ E++ C C C C
Sbjct: 66 HDIP-GGISNVENNMFINQLVEVFNVRDENTCQPIKCTACAESEVIKRCLDCAMDVCDNC 124
Query: 141 TGGSNHSSTSGDSEHTII 158
H+ HTII
Sbjct: 125 ARA--HTKFPVTRNHTII 140
>gi|335774974|gb|AEH58418.1| tripartite motif-containing protein 59-like protein [Equus
caballus]
Length = 403
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|390342768|ref|XP_003725733.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like
[Strongylocentrotus purpuratus]
Length = 379
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
FL C CL + PK+L C HT C CL R+A + T+ CP CREQ +
Sbjct: 12 DFLECQICLDSF----RRPKVLQCLHTFCQDCLLRMAPTVQ---DTVVCPTCREQTPLHG 64
Query: 89 GGVAALPPSFLVNQLLDLMS 108
GVA L +F+++ LLDL++
Sbjct: 65 EGVADLKNNFVLSNLLDLVT 84
>gi|345796488|ref|XP_545257.3| PREDICTED: tripartite motif-containing protein 59 [Canis lupus
familiaris]
Length = 404
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|156349351|ref|XP_001622021.1| hypothetical protein NEMVEDRAFT_v1g142847 [Nematostella vectensis]
gi|156208416|gb|EDO29921.1| predicted protein [Nematostella vectensis]
Length = 276
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 20/143 (13%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPICREQI 84
E +TC C EH P++LPC H+ C HCL +A S+ R G L CP+C+
Sbjct: 10 EDEVTCSIC------KEHFNDPRVLPCFHSFCRHCLEELAVHSEGR--GKLVCPLCKAGF 61
Query: 85 TIPRGGVAALPPSFLVNQLLDLMS------RQRRHIIPKCSTHNSQELLFCETCDTVFCL 138
I V++L +F++N ++ ++S +++ + C + + C CD C
Sbjct: 62 QISPADVSSLKVNFMINSIISVLSLFTSEDSKKKTVCQMCDSGEPAQGR-CNECDHFVCE 120
Query: 139 QCTGGSNHSSTSGDSEHTIIPFS 161
QC S H HTI+
Sbjct: 121 QCI--SAHKRLRPLQHHTILSLD 141
>gi|332025715|gb|EGI65873.1| RING finger protein nhl-1 [Acromyrmex echinatior]
Length = 1199
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYQGVQAFPTNVTLQRFLEL 77
>gi|5263316|gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 type and 4 WD40 PF|00400 (G
beta) domains [Arabidopsis thaliana]
Length = 860
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSYDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|344288611|ref|XP_003416040.1| PREDICTED: midline-1 isoform 1 [Loxodonta africana]
Length = 667
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSTEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|355557697|gb|EHH14477.1| hypothetical protein EGK_00407, partial [Macaca mulatta]
Length = 353
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTGRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>gi|194207867|ref|XP_001500989.2| PREDICTED: e3 ubiquitin-protein ligase TRIM63 [Equus caballus]
Length = 424
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I + S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRSGSVSVSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHQA 153
>gi|324504230|gb|ADY41827.1| RING finger protein nhl-1, partial [Ascaris suum]
Length = 831
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT CL CL A R L+CP CR + +P
Sbjct: 48 EQLLTCPICLDRY----KQPKLLPCHHTFCLPCLDNCADVIHR---VLKCPECRAEHPLP 100
Query: 88 RGGVAALPPSFLVNQLLDL 106
GV + ++ + LD+
Sbjct: 101 YDGVKSFQTNYTLTGFLDI 119
>gi|444724062|gb|ELW64683.1| Tripartite motif-containing protein 55 [Tupaia chinensis]
Length = 526
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETG 73
D E L C CL M+ +LPC H +C C S I + G
Sbjct: 2 DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGG 58
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRRHIIPKCSTHNSQEL-L 127
RCP CR ++ + R GV L + LV ++D+ + +++ P C H + + +
Sbjct: 59 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINI 118
Query: 128 FCETCDTVFCLQC 140
+C C+ C C
Sbjct: 119 YCLNCEVPTCSLC 131
>gi|327278537|ref|XP_003224018.1| PREDICTED: tripartite motif-containing protein 54-like [Anolis
carolinensis]
Length = 382
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLL--PCSHTVCLHCLSRIAASQ--TRETGTLRCPICREQITI 86
L+C CL ++ TP +L C+H C CL +I A Q + G CP+CR+ I +
Sbjct: 8 LSCPVCLELF-----TPPVLVLTCAHNFCKKCLEKILARQNCSHVNGQFSCPMCRKIIYL 62
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--------CSTHNSQELLFCETCDTVFCL 138
G+ LP + LV +L+ ++ ++ K C H L C T D C
Sbjct: 63 RGRGIGGLPRNILVESILEKFKYEQENLHAKEQDRLSQICEEHGESMNLMCLTDDKPICA 122
Query: 139 QCTGGSNHSS 148
C +H +
Sbjct: 123 ICKLFGDHEA 132
>gi|297666751|ref|XP_002811672.1| PREDICTED: RING finger protein 223 [Pongo abelii]
Length = 252
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 50 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 109
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 110 VPPAGAPAL 118
>gi|426256648|ref|XP_004021949.1| PREDICTED: midline-1 isoform 2 [Ovis aries]
Length = 629
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR ++ S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANSMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|405975270|gb|EKC39848.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 602
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR--IAASQTRETGT-LRCPICREQITIPR- 88
C CL + TP++LPCSH C C+S +++ +++E CP+CRE + P
Sbjct: 13 CSVCLEKF----KTPRILPCSHIFCHSCISSYLVSSCKSKEAPVGFSCPLCREFVPAPAD 68
Query: 89 -GGVAALPPSFLVNQLLDLMSRQRR-HIIPKCSTHNSQELL--FCETCDTVFCLQCTGGS 144
G A V ++LD +SR R ++ C N +E C TC+ C C
Sbjct: 69 IGKPATWAEGLPVCKILDKLSRSRESNLCAACQRENEEEEATDICITCEEAICANC--AK 126
Query: 145 NHSSTSGDSEHTIIPF 160
H S H ++P
Sbjct: 127 YHRRNLITSTHVVVPL 142
>gi|296080820|ref|NP_001171685.1| E3 ubiquitin-protein ligase TRIM63 [Sus scrofa]
gi|282848258|gb|ADB02909.1| muscle specific RING finger protein-1 [Sus scrofa]
Length = 354
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I + S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRSGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHKA 153
>gi|156385196|ref|XP_001633517.1| predicted protein [Nematostella vectensis]
gi|156220588|gb|EDO41454.1| predicted protein [Nematostella vectensis]
Length = 76
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK L C H +C CL +AA ++ + +RCP+CR +I IPRGG
Sbjct: 8 LLCPICLDEF----KEPKTLSCMHDLCRKCLEDMAARES--SRVIRCPLCRSEIDIPRGG 61
Query: 91 VAALPPSFLVNQLLD 105
V LP + + +L++
Sbjct: 62 VKNLPTNLRLMKLVE 76
>gi|440893492|gb|ELR46231.1| Midline-1, partial [Bos grunniens mutus]
Length = 702
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 11 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 66
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR ++ S E + C+
Sbjct: 67 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANSMTSAEKVLCQ 126
Query: 131 TCD 133
CD
Sbjct: 127 FCD 129
>gi|156384113|ref|XP_001633176.1| predicted protein [Nematostella vectensis]
gi|156220242|gb|EDO41113.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 28 ESFLTCGTCLCMYDGGEH--TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
E +TC C+ EH P+LLPC HT C HCL +A + G L CP+C+ +
Sbjct: 10 EDEVTCAICI------EHFTDPRLLPCLHTFCRHCLEDLAEHSGK--GKLVCPLCKVEYE 61
Query: 86 IPRGGVAALPPSFLVNQLLDLMS 108
I + +L +F +N L+ ++S
Sbjct: 62 IAVADIPSLKVNFPINNLISILS 84
>gi|19924163|ref|NP_115977.2| E3 ubiquitin-protein ligase TRIM63 [Homo sapiens]
gi|21362898|sp|Q969Q1.1|TRI63_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM63; AltName:
Full=Iris RING finger protein; AltName:
Full=Muscle-specific RING finger protein 1;
Short=MuRF-1; Short=MuRF1; AltName: Full=RING finger
protein 28; AltName: Full=Striated muscle RING zinc
finger protein; AltName: Full=Tripartite
motif-containing protein 63
gi|13785924|gb|AAK39519.1|AF353673_1 iris ring finger protein [Homo sapiens]
gi|16552480|dbj|BAB71318.1| unnamed protein product [Homo sapiens]
gi|18073356|emb|CAC81706.1| muscle specific RING finger 2 (MURF2) [Homo sapiens]
gi|51593349|gb|AAH80529.1| Tripartite motif-containing 63 [Homo sapiens]
gi|119628253|gb|EAX07848.1| tripartite motif-containing 63 [Homo sapiens]
Length = 353
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGIHKA 153
>gi|260815329|ref|XP_002602426.1| hypothetical protein BRAFLDRAFT_274964 [Branchiostoma floridae]
gi|229287735|gb|EEN58438.1| hypothetical protein BRAFLDRAFT_274964 [Branchiostoma floridae]
Length = 151
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKL-LPCSHTVCLHCL-----SRIAASQTRETGTLRCP 78
D E LTC CL M++ P L LPC H +C C SR S G RCP
Sbjct: 2 DNLERQLTCPICLEMFN----KPVLILPCQHNLCRKCANDVFQSRGTPSVVGSGGRFRCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRR----HIIPK-----CSTHNSQEL-LF 128
CR ++ + R GV L + LV ++D+ ++ I K C H + + ++
Sbjct: 58 TCRHEVVLDRHGVYGLQRNLLVENIIDIYKQEMEGTGIKITKKKEELMCEVHEEERINVY 117
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIP 159
C C + C C H D E IP
Sbjct: 118 CMACQSPICSMCKVFGEHQ----DHEVATIP 144
>gi|55586639|ref|XP_524625.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 isoform 2 [Pan
troglodytes]
gi|397476213|ref|XP_003809504.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 isoform 1 [Pan
paniscus]
Length = 353
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGIHKA 153
>gi|30585235|gb|AAP36890.1| Homo sapiens ring finger protein 28 [synthetic construct]
gi|61370564|gb|AAX43517.1| ring finger protein 28 [synthetic construct]
gi|61370572|gb|AAX43518.1| ring finger protein 28 [synthetic construct]
Length = 347
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGIHKA 153
>gi|300796661|ref|NP_001179751.1| midline-1 [Bos taurus]
gi|296470444|tpg|DAA12559.1| TPA: midline 1 (Opitz/BBB syndrome) isoform 1 [Bos taurus]
gi|296470445|tpg|DAA12560.1| TPA: midline 1 (Opitz/BBB syndrome) isoform 2 [Bos taurus]
Length = 667
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR ++ S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANSMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|30583585|gb|AAP36037.1| ring finger protein 28 [Homo sapiens]
gi|61360816|gb|AAX41932.1| ring finger protein 28 [synthetic construct]
Length = 346
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>gi|242011481|ref|XP_002426477.1| nhl repeat-containing protein, putative [Pediculus humanus
corporis]
gi|212510603|gb|EEB13739.1| nhl repeat-containing protein, putative [Pediculus humanus
corporis]
Length = 1324
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL-----------MSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
P GV P + + + L+L S Q I+ +C+ + + C CD
Sbjct: 58 PYQGVQGYPTNVTLQRFLELHIEITGELPDPTSGQ---IMERCNVCSEKSYCSMCMHCDK 114
Query: 135 VFCLQCTG 142
C C G
Sbjct: 115 KICGDCKG 122
>gi|66472544|ref|NP_001018439.1| tripartite motif-containing 13 [Danio rerio]
gi|82192762|sp|Q503I2.1|TRI13_DANRE RecName: Full=Tripartite motif-containing 13
gi|63100698|gb|AAH95319.1| Tripartite motif-containing 13 [Danio rerio]
Length = 404
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT--LRCPICREQIT 85
E LTC C C+++ P++LPCSH+ C CL I T +CP CR++
Sbjct: 5 EEDLTCPICCCLFED----PRVLPCSHSFCKKCLEGILDGNRSPTWRPPFKCPTCRKETV 60
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK---CSTHNSQEL-LFCETCDTVFCLQCT 141
G+A+L ++ + +++ +R R ++P+ C H+ Q L +FC T + C C
Sbjct: 61 --HNGIASLQVNYSLRGIVEKYNRIR--VMPRMSQCRVHSGQPLNIFCATDLKLICGFCA 116
Query: 142 GGSNHS 147
+H
Sbjct: 117 TTGDHK 122
>gi|426256646|ref|XP_004021948.1| PREDICTED: midline-1 isoform 1 [Ovis aries]
Length = 667
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR ++ S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANSMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|354500023|ref|XP_003512102.1| PREDICTED: tripartite motif-containing protein 59 [Cricetulus
griseus]
gi|344258459|gb|EGW14563.1| Tripartite motif-containing protein 59 [Cricetulus griseus]
Length = 403
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ + C H Q L ++C + C C
Sbjct: 61 SIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|260794748|ref|XP_002592369.1| hypothetical protein BRAFLDRAFT_106229 [Branchiostoma floridae]
gi|229277588|gb|EEN48380.1| hypothetical protein BRAFLDRAFT_106229 [Branchiostoma floridae]
Length = 565
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 18/124 (14%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+ FL CG CL + PK+LPC+HT C CL A + + CP CR +
Sbjct: 16 GQEFLVCGICLDHFT----LPKILPCAHTFCQACLETYAGRRR----FIYCPNCRRVAEL 67
Query: 87 PRG-GVAALPPSFLVNQLLDLMSRQR--------RHIIPKCSTHNSQELL-FCETCDTVF 136
GV LP +F V L D+++ + R +C H ++ FC+ C
Sbjct: 68 DSASGVRGLPGNFWVTNLRDVIAERDSENPDVKGRLQGNRCKLHPGEQCRHFCQDCHVPV 127
Query: 137 CLQC 140
C +C
Sbjct: 128 CGEC 131
>gi|386781507|ref|NP_001247633.1| E3 ubiquitin-protein ligase TRIM63 [Macaca mulatta]
gi|355761049|gb|EHH61744.1| hypothetical protein EGM_19827 [Macaca fascicularis]
gi|380817284|gb|AFE80516.1| E3 ubiquitin-protein ligase TRIM63 [Macaca mulatta]
Length = 353
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTGRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>gi|90652813|ref|NP_001035071.1| tripartite motif-containing 55b [Danio rerio]
gi|89130609|gb|AAI14284.1| Tripartite motif-containing 55b [Danio rerio]
Length = 366
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ----------TRETGT 74
D E L C CL M+ +LPC H +C C + I S G
Sbjct: 2 DSLEKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQSSNPYLPIRGGSVTSGGR 58
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---------QRRHIIPKCSTHNSQE 125
RCP CR ++ + R GV L + LV ++D+ + +R+ P C H ++
Sbjct: 59 FRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQEYISSRPSPERKVDQPMCEVHEDEK 118
Query: 126 L-LFCETCDTVFCLQCTGGSNHSS 148
+ ++C TC C C H
Sbjct: 119 INIYCLTCGVPTCSMCKVFGAHKD 142
>gi|170295836|ref|NP_080139.3| tripartite motif-containing protein 59 [Mus musculus]
gi|342187077|sp|Q922Y2.2|TRI59_MOUSE RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 1
Length = 403
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ + C H Q L ++C + C C
Sbjct: 61 SIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|327412333|ref|NP_001192181.1| RING finger protein 223 [Homo sapiens]
gi|338819332|sp|E7ERA6.1|RN223_HUMAN RecName: Full=RING finger protein 223
Length = 249
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPPAGAPAL 115
>gi|390360650|ref|XP_003729738.1| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like, partial
[Strongylocentrotus purpuratus]
Length = 426
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C CL ++D +L C HT C CL R A+ R+ + CP+CR+ +
Sbjct: 13 ILCPLCLDVFDNA----SMLICGHTFCKQCLERYDAAH-RDLDHMVCPLCRKVTKLAESR 67
Query: 91 VAALPPSFLVNQLLD-----------LMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQ 139
VA LPP+F V L+D ++ Q R + C + FC C T C +
Sbjct: 68 VAGLPPNFTVKALVDEYHSSHAGINTVLDGQTRCTL--CELQGDA-VSFCYECGTFMCAK 124
Query: 140 CTGG 143
C G
Sbjct: 125 CHHG 128
>gi|13879442|gb|AAH06700.1| Tripartite motif-containing 59 [Mus musculus]
gi|19343567|gb|AAH25430.1| Tripartite motif-containing 59 [Mus musculus]
Length = 403
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ + C H Q L ++C + C C
Sbjct: 61 SIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|291400092|ref|XP_002716385.1| PREDICTED: tripartite motif-containing 59 [Oryctolagus cuniculus]
Length = 403
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCKNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALMAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|321471405|gb|EFX82378.1| hypothetical protein DAPPUDRAFT_302628 [Daphnia pulex]
Length = 189
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +TC CL YD PK L CSHT+CL C TR+ T+ CP CR Q T+
Sbjct: 10 EELVTCNICLNQYDEEIRKPKFLQCSHTICLECFQA-----TRQEDTVTCPFCR-QRTLK 63
Query: 88 RGG 90
G
Sbjct: 64 DNG 66
>gi|405975549|gb|EKC40108.1| Tripartite motif-containing protein 59 [Crassostrea gigas]
Length = 164
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL +Y +P LPC H+ C CL +A Q TL CP CR I IP GG
Sbjct: 9 LSCSICLELY----RSPLTLPCLHSFCAECLRELA--QGSNGPTLSCPQCRANIQIPGGG 62
Query: 91 VAALPPSFLVNQLLDLMSRQRRHII 115
VA P +F + ++ R R I+
Sbjct: 63 VANFPKNFNLESIIGESRRCLRTIV 87
>gi|402853486|ref|XP_003891424.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Papio anubis]
Length = 353
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTGRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGVHKA 153
>gi|426225987|ref|XP_004007138.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 224 [Ovis
aries]
Length = 197
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HTVC C+ R+AA E + CP CR+ +PRGGVA
Sbjct: 64 CVVCYSAYDLAGHLPRRLYCGHTVCQACVRRLAAPAP-EQRWVPCPQCRQSTPVPRGGVA 122
Query: 93 AL 94
L
Sbjct: 123 ML 124
>gi|9929937|dbj|BAB12125.1| hypothetical protein [Macaca fascicularis]
Length = 225
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|334347431|ref|XP_001370279.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 408
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQTRETGTLR----CPICR 81
E LTC C +++ P++LPCSHT C +CL I A+ LR CP CR
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYVRRALRIPLTCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQ 139
+ IP G+ +LP +F + +++ ++ + C H+ Q L ++CLQ
Sbjct: 61 RTVEIPPPGIESLPINFALRAIIEKYQQEGCLDVITCPEHSRQPL-------NIYCLQ 111
>gi|426221911|ref|XP_004005149.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Ovis aries]
Length = 354
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTGRVGSAAMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHKA 153
>gi|281351588|gb|EFB27172.1| hypothetical protein PANDA_001138 [Ailuropoda melanoleuca]
Length = 326
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPFWTNRVGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPPQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHQA 153
>gi|403287271|ref|XP_003934874.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQASNPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGVHKA 153
>gi|260832796|ref|XP_002611343.1| hypothetical protein BRAFLDRAFT_210928 [Branchiostoma floridae]
gi|229296714|gb|EEN67353.1| hypothetical protein BRAFLDRAFT_210928 [Branchiostoma floridae]
Length = 68
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL ++ A T G L CP CR+ +
Sbjct: 9 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLEKLLA--TEPVGKLDCPTCRQDV 62
Query: 85 TIPRGG 90
+PR G
Sbjct: 63 PLPRNG 68
>gi|449276529|gb|EMC85001.1| E3 ubiquitin-protein ligase TRIM50 [Columba livia]
Length = 495
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 22/147 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE-TGTLRCPICREQITI 86
E L C CL ++ P +L C H+ C C+ S +RE G CP+CR+ +
Sbjct: 11 EDQLLCPICLEVFK----EPLMLQCGHSYCKSCV----VSLSRELDGRFLCPVCRQSVD- 61
Query: 87 PRGGVAALPPSFLVNQLLD-LMSRQRRHIIPK-CSTHNSQELLFCETCDTVFCLQCTGGS 144
+A PP+ + ++++ L SR P+ C TH++ LFCE V C C
Sbjct: 62 ----CSASPPNVTLARVIEVLQSRSEAEPTPESCPTHHNPLSLFCEADQEVICGLCGTIG 117
Query: 145 NHSSTSGDSEHTIIPFSIAIKRMSEIL 171
NH +H I P S RM E L
Sbjct: 118 NH------RQHKITPISTTYCRMKEEL 138
>gi|194383676|dbj|BAG59196.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+
Sbjct: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 106
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 107 VPPAGAPAL 115
>gi|156351085|ref|XP_001622356.1| predicted protein [Nematostella vectensis]
gi|156208871|gb|EDO30256.1| predicted protein [Nematostella vectensis]
Length = 621
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 87/229 (37%), Gaps = 73/229 (31%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPR 88
S +TC CL Y P++L C HT C HCL + ++E T+ CP CRE+I I
Sbjct: 12 SDVTCSLCLGQY----QDPRVLACLHTYCRHCLESLV-EHSKEC-TVSCPQCREKIEISV 65
Query: 89 GGVAALPPSFLVNQLLDLMS---------------------------------------- 108
V +L F++ L++ MS
Sbjct: 66 EEVKSLKVDFMLIDLIEKMSVDQENKGDISITCETCQSDVATGRCDDCCEFMCEFCITCH 125
Query: 109 ----RQRRHIIP---------KCSTH------NSQELLFCETCDTVFCLQC------TGG 143
R ++H I C +H + LFC+TCD + C C T
Sbjct: 126 RRLLRTKQHKIKGIKEVKGTLSCKSHYCPHHREEKLTLFCDTCDELICRDCVIKAHQTHK 185
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECV--SKNKVCPERKS 190
+ +S D E +I + I + ++ L +A+ V K ++ +RKS
Sbjct: 186 YDFTSNIIDQEKELIKYKIEEVKFKQVDLSQAHANVFSEKARIEAQRKS 234
>gi|156390777|ref|XP_001635446.1| predicted protein [Nematostella vectensis]
gi|156222540|gb|EDO43383.1| predicted protein [Nematostella vectensis]
Length = 589
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 33 CGTCLCMYDGGEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
C +C+ D E PK LP C+H VC CL +A E+ +RCP+CR++ T+P G+
Sbjct: 21 CSCPVCLEDFLE--PKSLPNCAHNVCRKCLEGMATDS--ESKEIRCPVCRKESTLPEDGI 76
Query: 92 AALPPSFLVNQLLDLM-SRQRRHIIPKCSTHNSQEL 126
LP + L+ +LL+ R R I +C +E+
Sbjct: 77 NGLPTNCLIVKLLEATPGRIERLEIRRCIGAVKEEI 112
>gi|301755018|ref|XP_002913345.1| PREDICTED: e3 ubiquitin-protein ligase TRIM63-like [Ailuropoda
melanoleuca]
Length = 354
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPFWTNRVGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPPQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHQA 153
>gi|126631607|gb|AAI34093.1| Si:dkey-221h15.2 protein [Danio rerio]
Length = 216
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL ++ +LPC H +C C + + A++ G R
Sbjct: 21 ERQLICPICLEIF---SKPVVILPCQHNLCRKCANDVFQASNPLWQNRASTTVSTGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLM-SRQRRHIIPK-------CSTHNSQEL-L 127
CP CR ++ + R GV L + LV ++D+ S R ++PK C H +++ +
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKSESTRPLLPKTEQQQLMCDQHEEEKINI 137
Query: 128 FCETCDTVFCLQCTGGSNHSS 148
+C TC+T C C H
Sbjct: 138 YCLTCETPTCSMCKVFGAHKD 158
>gi|297665935|ref|XP_002811293.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 isoform 1 [Pongo
abelii]
Length = 353
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>gi|291232828|ref|XP_002736356.1| PREDICTED: NHL (ring finger b-box coiled coil) domain containing
family member (nhl-1)-like [Saccoglossus kowalevskii]
Length = 871
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E L C CL Y+ PK+LPC HT C CL + + R+ L+CP CR + +
Sbjct: 6 EELLNCAVCLERYN----RPKILPCQHTFCQSPCLENLIDIRVRK---LKCPECRMEHRV 58
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + +++ LD+
Sbjct: 59 PGNGVRGFPNNVTISRFLDI 78
>gi|260833366|ref|XP_002611628.1| hypothetical protein BRAFLDRAFT_117133 [Branchiostoma floridae]
gi|229296999|gb|EEN67638.1| hypothetical protein BRAFLDRAFT_117133 [Branchiostoma floridae]
Length = 757
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 68/186 (36%), Gaps = 69/186 (37%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRE-TGTLRCPICREQITIP 87
S L C C +Y P++L C HT C CL Q E GT+ CP+C + +P
Sbjct: 24 SLLVCQLCERLY----KQPRILSCLHTFCHKCLQYEVLKQGGEGQGTMACPVCAQHTALP 79
Query: 88 RGGVAALP--------------------------------------PSFLVNQLL---DL 106
R G+A+LP P FL L D
Sbjct: 80 R-GIASLPDNHVITKMQEAEAIMSGNIHCTNCDIAGAIAAARCNDCPEFLCAHCLDTHDF 138
Query: 107 MSRQRRH-IIP----------------KCSTHNSQEL-LFCETCDTVFCLQCT----GGS 144
M + H ++P C TH + L LFC TC+ + C +CT GGS
Sbjct: 139 MKVNKSHNVVPICELSQQDLTAFSQPLSCQTHKEEPLELFCNTCEVLICRKCTKDGHGGS 198
Query: 145 NHSSTS 150
H ++
Sbjct: 199 THEHSA 204
>gi|432102712|gb|ELK30193.1| Midline-1 [Myotis davidii]
Length = 357
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|291234819|ref|XP_002737346.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 741
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E F+++FL C C Y K+LPC H+ C C+ ++ Q L CP+CR
Sbjct: 10 EQFDDNFLVCTVCSERY----RNAKILPCLHSFCEQCIHKLV--QKSGGKNLPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR--HIIPKCST-HNSQELLFCETCDTVFCLQC 140
+P G +++ + VN+L+ L+ ++ + + + KC +C C C C
Sbjct: 64 HDLPEGA-SSVQTNVFVNELVVLLGKRDKETNYVQKCGGCQQGSVTTYCIDCAVGLCDNC 122
Query: 141 T 141
T
Sbjct: 123 T 123
>gi|426328454|ref|XP_004025267.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 isoform 1 [Gorilla
gorilla gorilla]
Length = 353
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>gi|402862966|ref|XP_003895808.1| PREDICTED: tripartite motif-containing protein 4 [Papio anubis]
gi|383410809|gb|AFH28618.1| tripartite motif-containing protein 4 isoform beta [Macaca mulatta]
gi|384942808|gb|AFI35009.1| tripartite motif-containing protein 4 isoform beta [Macaca mulatta]
gi|387540902|gb|AFJ71078.1| tripartite motif-containing protein 4 isoform beta [Macaca mulatta]
Length = 474
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E LTC CL + P + C H C CL R S G CP CR
Sbjct: 4 EDLQEE-LTCPICLEYF----QDPVSIECGHNFCRGCLHR---SWAPGGGPFPCPECRHP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
AAL P++ + +L + R+R +P CS H LFCE CL C
Sbjct: 56 -----SAPAALRPNWALARLTEKTRRRRLGPVPPGLCSRHWEPLRLFCEDDQRPVCLVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK 183
H + H + P A + E LL VSK K
Sbjct: 111 ESQEHQT------HAMAPIDEAFESYREKLLKSQRNLVSKMK 146
>gi|195426818|ref|XP_002061491.1| GK20936 [Drosophila willistoni]
gi|194157576|gb|EDW72477.1| GK20936 [Drosophila willistoni]
Length = 1354
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|13171051|emb|CAC33173.1| ring finger protein 28 [Homo sapiens]
Length = 340
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S + G R
Sbjct: 5 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 61
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 62 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 121
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 122 LTCEVPTCSMCKVFGIHKA 140
>gi|22024206|ref|NP_611390.2| another B-box affiliate, isoform A [Drosophila melanogaster]
gi|24655386|ref|NP_725843.1| another B-box affiliate, isoform B [Drosophila melanogaster]
gi|21464288|gb|AAM51947.1| GH06739p [Drosophila melanogaster]
gi|21626957|gb|AAF57612.2| another B-box affiliate, isoform A [Drosophila melanogaster]
gi|21626958|gb|AAF57611.2| another B-box affiliate, isoform B [Drosophila melanogaster]
Length = 1353
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|321471270|gb|EFX82243.1| hypothetical protein DAPPUDRAFT_316918 [Daphnia pulex]
Length = 355
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E F+ CG C C +D PK L C+HTVC +CL +I + CP CR+
Sbjct: 12 EHFVNCGVCFCEFDEENRKPKFLLCAHTVCFNCLQKICLKD-----MISCPFCRKNFV-- 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQR 111
V +LP + ++ L +
Sbjct: 65 DVTVTSLPNNLYALHIIKLKKEKE 88
>gi|432869220|ref|XP_004071679.1| PREDICTED: zinc-binding protein A33-like [Oryzias latipes]
Length = 459
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 65/163 (39%), Gaps = 25/163 (15%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F E LTC C ++ P LLPCSH+ C +CL R S+ R CP+CR++
Sbjct: 3 FPEEDLTCPVCCDIFKD----PILLPCSHSFCRNCLKRCWDSRLR-----GCPVCRKR-- 51
Query: 86 IPRGGVAALPPSFL----VNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCT 141
G A PPS L V + L + RQ C H + LFC C+ C
Sbjct: 52 ----GPKADPPSNLALRNVCEALQQVKRQNSERGDNCDLHGEKLKLFCLADKQPICVVCQ 107
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKV 184
H + H +P A+ + LL K K+
Sbjct: 108 SSKQHKN------HNCLPTEEALVDCKDELLASLQNLEEKLKI 144
>gi|224081686|ref|XP_002195277.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Taeniopygia guttata]
Length = 353
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET----GTLRCP 78
E L C CL M+ +LPC H +C C + + + Q+R + G RCP
Sbjct: 18 EKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQAANPYWQSRGSVISGGRFRCP 74
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFCET 131
CR ++ + R GV L + LV ++D+ ++ ++ P C H + + ++C T
Sbjct: 75 SCRHEVLLDRHGVYGLQRNLLVENIIDIYKQECSSRPLKKGEHPMCKEHEDERINIYCVT 134
Query: 132 CDTVFCLQCTGGSNHSS 148
C+ C C H
Sbjct: 135 CEVPTCSMCKVFGAHKD 151
>gi|321467873|gb|EFX78861.1| hypothetical protein DAPPUDRAFT_320138 [Daphnia pulex]
Length = 368
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + + FL C C YD PK+LPCSHT C CL + + TL+CP+CR +
Sbjct: 8 ELYQDEFLCCSICFHKYDLQLMRPKVLPCSHTFCFTCLKALHSGN-----TLKCPVCRRE 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR 111
+ V LP + V ++ L + R
Sbjct: 63 -AVEITDVLTLPNNKYVQYIVHLSEKLR 89
>gi|213512264|ref|NP_001133095.1| LOC394070 protein-like [Salmo salar]
gi|197631923|gb|ACH70685.1| LOC394070 protein-like [Salmo salar]
Length = 350
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 26/144 (18%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLEMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHII-------------------PKCSTHNSQE 125
+ R GV L + LV ++D+ +Q+ P C H ++
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQEGGGGSGVGGSTETPLKPKDSKEPMCQEHEEEK 136
Query: 126 L-LFCETCDTVFCLQCTGGSNHSS 148
+ ++C TC C C H
Sbjct: 137 INIYCVTCQMPTCSMCKVFGQHKD 160
>gi|195487256|ref|XP_002091832.1| GE12016 [Drosophila yakuba]
gi|194177933|gb|EDW91544.1| GE12016 [Drosophila yakuba]
Length = 1354
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|328711406|ref|XP_001948694.2| PREDICTED: RING finger protein 207-like [Acyrthosiphon pisum]
Length = 921
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
N + L C C Y P +L C HT C C+ + G + CP+C Q T+
Sbjct: 32 NRNPLLCFLCEDYYSD----PCILICFHTFCAKCIR-----TKNQEGKINCPLCGTQTTL 82
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQE---LLFCETCDTVFCLQCTGG 143
+ GV PP +L+ +L+D+++ + P CS + +E + FC TC C C
Sbjct: 83 -KDGVQLPPPDYLMCKLIDMVNIEN----PPCSNCDKREPSSMYFCSTCGQALCKPCREN 137
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEI 170
++ + S H I+ S + +EI
Sbjct: 138 THRAKMF--SSHDIVQMSKRLADKTEI 162
>gi|308387352|ref|NP_001184144.1| muscle RING finger 3 [Oncorhynchus mykiss]
gi|308053494|gb|ADO00984.1| muscle RING finger 3 [Oncorhynchus mykiss]
Length = 350
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 26/144 (18%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLEMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHII-------------------PKCSTHNSQE 125
+ R GV L + LV ++D+ +Q+ P C H ++
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQEGGGGSGSGDSTETPLKPKDSKEPMCQEHEEEK 136
Query: 126 L-LFCETCDTVFCLQCTGGSNHSS 148
+ ++C TC C C H
Sbjct: 137 INIYCVTCQMPTCSMCKVFGQHKD 160
>gi|194881256|ref|XP_001974764.1| GG21942 [Drosophila erecta]
gi|190657951|gb|EDV55164.1| GG21942 [Drosophila erecta]
Length = 1353
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|260826069|ref|XP_002607988.1| hypothetical protein BRAFLDRAFT_191795 [Branchiostoma floridae]
gi|229293338|gb|EEN63998.1| hypothetical protein BRAFLDRAFT_191795 [Branchiostoma floridae]
Length = 70
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D + FL C CL + PK+LPC HT C CL R+ A T G L CP CR+ +
Sbjct: 11 DITDEFLVCQVCLEDF----KQPKMLPCLHTFCQPCLERLLA--TEPVGKLDCPTCRQDV 64
Query: 85 TIPRGG 90
+P+ G
Sbjct: 65 PLPQNG 70
>gi|195584776|ref|XP_002082180.1| GD11426 [Drosophila simulans]
gi|194194189|gb|EDX07765.1| GD11426 [Drosophila simulans]
Length = 1047
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|311275912|ref|XP_003134970.1| PREDICTED: midline-1 [Sus scrofa]
Length = 667
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR ++ +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDGNSMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|156388837|ref|XP_001634699.1| predicted protein [Nematostella vectensis]
gi|156221785|gb|EDO42636.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 89/241 (36%), Gaps = 78/241 (32%)
Query: 17 ETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR 76
ET IN D +TC CL Y P++L C HT C HCL + + + T+
Sbjct: 5 ETTPINVSD-----VTCSLCLEQY----QDPRVLACLHTYCRHCLESLV--EHSKECTVS 53
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMS---------------------------- 108
CP CRE+I I V L F++ L++ MS
Sbjct: 54 CPQCREKIEISVEEVKCLKVDFMLIDLIEKMSVDQENKGDISITCETCQSDVATGRCDDC 113
Query: 109 ----------------RQRRHIIP---------KCSTH------NSQELLFCETCDTVFC 137
R ++H I C +H + LFC+TCD + C
Sbjct: 114 CEFMCEFCITCHRRLLRTKQHKIKGIKEVKGTLSCKSHYCPHHREEKLTLFCDTCDELIC 173
Query: 138 LQC------TGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECV--SKNKVCPERK 189
C T + +S D E +I + I + ++ L +A+ V K ++ +RK
Sbjct: 174 RDCVIKAHQTHKYDFTSNIIDREKELIKYKIEEVKSKQVDLSQAHANVLSEKARIEAQRK 233
Query: 190 S 190
S
Sbjct: 234 S 234
>gi|26343091|dbj|BAC35202.1| unnamed protein product [Mus musculus]
Length = 197
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 STSLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R GV L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H + + ++C C+ C C H
Sbjct: 119 LDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKD 155
>gi|194757852|ref|XP_001961176.1| GF11130 [Drosophila ananassae]
gi|190622474|gb|EDV37998.1| GF11130 [Drosophila ananassae]
Length = 1348
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|340376131|ref|XP_003386587.1| PREDICTED: hypothetical protein LOC100637882 [Amphimedon
queenslandica]
Length = 732
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 47 PKLLPCSHTV-CLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
P LL + C HCL + + E + CP CR +P+ GV A P +F +N L +
Sbjct: 315 PGLLKLEEQLTCDHCLEALPRDKKNED-HIFCPTCRHHTELPKEGVGAFPVAFHLNNLQE 373
Query: 106 LMSRQRRHII-------PKCSTHNSQELLFCETCDTVFCLQC 140
+ + + C+ H +FCE C+TV C+ C
Sbjct: 374 TYNLMKDAAVFSPAPQEDTCNDHGKPLDVFCEACNTVICVTC 415
>gi|221330419|ref|NP_001137707.1| another B-box affiliate, isoform C [Drosophila melanogaster]
gi|220902287|gb|ACL83161.1| another B-box affiliate, isoform C [Drosophila melanogaster]
Length = 1517
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|195384463|ref|XP_002050937.1| GJ19924 [Drosophila virilis]
gi|194145734|gb|EDW62130.1| GJ19924 [Drosophila virilis]
Length = 1346
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|12848905|dbj|BAB28131.1| unnamed protein product [Mus musculus]
Length = 196
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ + C H Q L ++C + C C
Sbjct: 61 SIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|334349731|ref|XP_001378274.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 338
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG--TLRCPICREQIT 85
E LTC C +++ P++LPCSHT C CL + + G + CP CR I
Sbjct: 5 EEELTCPICYSIFE----DPRVLPCSHTFCRKCLENVLQASGNFYGRRDITCPTCRHIIE 60
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQ 139
I G+ +LP +F + +++ ++ C H+SQ L ++CLQ
Sbjct: 61 ITPPGIDSLPINFALRAIIEKYEQEEHPDGITCPEHSSQPL-------NMYCLQ 107
>gi|405954643|gb|EKC22027.1| Proto-oncogene tyrosine-protein kinase FYN [Crassostrea gigas]
Length = 689
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 LSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLS 62
L+M+ T S+ S+L E + E FL+C CL + PK LPC H+ C HCL
Sbjct: 169 LTMARTPSSRSSLREKL-------QEEFLSCKICLESF----IKPKALPCLHSFCEHCLR 217
Query: 63 RIAASQTRET-GTLRCPICREQITIPRGGVAALPPSF 98
E G CP+CR+ IP G+ +F
Sbjct: 218 DYVRRHPGEKPGHFPCPMCRKDTKIPERGIGDFQDNF 254
>gi|213511072|ref|NP_001133124.1| muscle specific ring finger protein 1-like [Salmo salar]
gi|197632015|gb|ACH70731.1| muscle specific ring finger protein 1-like [Salmo salar]
Length = 349
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 26/144 (18%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLEMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHII-------------------PKCSTHNSQE 125
+ R GV L + LV ++D+ +Q+ P C H ++
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQEGGGGSGSSDSTETPLKPKDSKEPMCQEHEEEK 136
Query: 126 L-LFCETCDTVFCLQCTGGSNHSS 148
+ ++C TC C C H
Sbjct: 137 INIYCVTCQMPTCSMCKVFGQHKD 160
>gi|260832880|ref|XP_002611385.1| hypothetical protein BRAFLDRAFT_211026 [Branchiostoma floridae]
gi|229296756|gb|EEN67395.1| hypothetical protein BRAFLDRAFT_211026 [Branchiostoma floridae]
Length = 707
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 25/129 (19%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-LRCPICREQITIPRG 89
LTC C Y PK+L C H+ C CL + +E GT L C +C ++ ++P
Sbjct: 17 LTCPLCEQHY----KKPKVLSCLHSFCQACLDK---QLQKEPGTALACDVCEQETSLPSQ 69
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHII----------------PKCSTHNSQELLF-CETC 132
G++ LP F+ LL+ + +I+ C+TH + L F C TC
Sbjct: 70 GLSGLPDDFVARNLLENILLSSANIVCTSCTSKSAAVALQRPVFCTTHQGEPLKFYCNTC 129
Query: 133 DTVFCLQCT 141
C +CT
Sbjct: 130 QVPICKECT 138
>gi|50759253|ref|XP_417589.1| PREDICTED: RING finger protein 223 [Gallus gallus]
Length = 269
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRETGTLRCPICREQITI 86
S + C C YD TPKLL CSH CL C++R++ L CP CR+ +I
Sbjct: 65 SPVECSICFNTYDNTFKTPKLLQCSHVFCLECVARLSKGLPPNHPEDQLPCPFCRQLTSI 124
Query: 87 PRGGVAAL 94
P+ G AL
Sbjct: 125 PQEGAPAL 132
>gi|405967139|gb|EKC32339.1| E3 ubiquitin-protein ligase TRIM33 [Crassostrea gigas]
Length = 747
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 21/150 (14%)
Query: 23 YE-DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR---CP 78
YE D E+FLTC C + P LPC H+ C C+SR T+ R CP
Sbjct: 6 YEPDVAEAFLTCSIC----EEDFKDPVGLPCLHSFCKECISRHIVESTKGQKLARGFNCP 61
Query: 79 ICREQIT------IPRGGVAALPPSFLVNQLLD--LMSRQRRHIIPKCSTHNSQ--ELLF 128
C+ Q+ P+ V + P + V L++ + + R P CS N + + +
Sbjct: 62 KCKRQVDAPDPQQAPQHWVESFPVNHFVKNLMENVRLRTENRECDP-CSKRNDKIIAVKW 120
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C+ C +C QC S H S H +I
Sbjct: 121 CKECSEAYCEQCE--SFHKSLKYLQHHNLI 148
>gi|390353094|ref|XP_003728033.1| PREDICTED: uncharacterized protein LOC100892566 [Strongylocentrotus
purpuratus]
Length = 678
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + +P LL C HT C CL Q + + + C +C+++ + +
Sbjct: 13 LACPLCLEAF----KSPTLLQCGHTFCKDCLQHHNEKQ-KGSNYVECYVCKKRTKLGQDR 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPK-CSTHNSQ-ELLFCETCDTVFCLQCTGGSNHS- 147
+A LPP+F + L D + + ++P C H ++ + +FCE C+ C+ C S+ S
Sbjct: 68 IAGLPPNFSLKGLQDDLYDE--CLLPNSCVLHKTECKNIFCEVCEVFICITCFIESHQSH 125
Query: 148 --STSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVR 204
D E + + + + S++ KA + V K R+ N+ + + +R
Sbjct: 126 RIMKKEDLEEELRKKKVTLSQESKVRKTKAKQFV---KNAERRRRNINAHLGELECSIR 181
>gi|354495353|ref|XP_003509795.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63-like [Cricetulus
griseus]
Length = 382
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSLCKVFGAHQA 153
>gi|395521817|ref|XP_003765011.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Sarcophilus
harrisii]
Length = 400
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ---------TRETGTLRCP 78
E L C CL M+ +LPC H +C C + I + + G RCP
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWSNRGGSISGGRFRCP 74
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFCET 131
CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C T
Sbjct: 75 SCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGTHPMCKEHEDEKINIYCLT 134
Query: 132 CDTVFCLQCTGGSNHSS 148
C+ C C H +
Sbjct: 135 CEVPTCSMCKVFGAHKA 151
>gi|390369315|ref|XP_003731623.1| PREDICTED: E3 ubiquitin-protein ligase TRIM33-like
[Strongylocentrotus purpuratus]
Length = 652
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C CL ++D +L C HT C CL R A+ R+ + CP+CR+ +
Sbjct: 13 ILCPLCLDVFDNAS----MLICGHTFCKQCLERYDAAH-RDLDHMVCPLCRKVTKLDESR 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHI------IPKCSTHNSQ--ELLFCETCDTVFCLQCTG 142
V LP +F V L+D I PKC+ + Q + FC C C +C
Sbjct: 68 VTGLPTNFTVKGLVDEYHGSHGGINAVLEGQPKCTACDLQGDAVSFCYECGNYMCTKCDH 127
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
+H TS EH ++ ++ + I
Sbjct: 128 CHSH-LTSLFKEHQVVSMKDVVEGTASI 154
>gi|340506625|gb|EGR32722.1| kelch motif family protein, putative [Ichthyophthirius multifiliis]
Length = 626
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C C +YD P+ LPC HT C +CL +I + ++ L CP CR +
Sbjct: 1 MECPMCAELYDEIIKIPRNLPCGHTFCEYCLKQILSLKS----YLECPNCRRKFE-RNLQ 55
Query: 91 VAALPPSFLVNQLLDLMSRQR--RHIIPKCSTHNSQELLFCETCDTVFCLQCTG 142
+ L +++ LDL +Q + + C H L FCE C C+QC
Sbjct: 56 IDQLSKNYIA---LDLAIKQSQLQKKLHMCDKHFEFCLFFCEDCQLNMCMQCIA 106
>gi|195029981|ref|XP_001987850.1| GH22138 [Drosophila grimshawi]
gi|193903850|gb|EDW02717.1| GH22138 [Drosophila grimshawi]
Length = 1353
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|440905950|gb|ELR56266.1| E3 ubiquitin-protein ligase TRIM63, partial [Bos grunniens mutus]
Length = 353
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI------------AASQTRETGTL 75
E L C CL M+ +LPC H +C C + I S G
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQQAANPYWTGRVGSAAMSGGRF 74
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LF 128
RCP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++
Sbjct: 75 RCPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIY 134
Query: 129 CETCDTVFCLQCTGGSNHSS 148
C TC+ C C H +
Sbjct: 135 CLTCEVPTCSMCKVFGAHKA 154
>gi|195120698|ref|XP_002004858.1| GI19367 [Drosophila mojavensis]
gi|193909926|gb|EDW08793.1| GI19367 [Drosophila mojavensis]
Length = 1340
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|73950163|ref|XP_544488.2| PREDICTED: E3 ubiquitin-protein ligase TRIM63 isoform 1 [Canis
lupus familiaris]
Length = 354
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPFWTNRVGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEMPTCSMCKVFGAHKA 153
>gi|449279463|gb|EMC87044.1| Tripartite motif-containing protein 55 [Columba livia]
Length = 537
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C S I + G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R GV L + LV ++D+ + +R+ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERKCDQPMCEEHEDERINIYCL 137
Query: 131 TCDTVFCLQCTGGSNHSS 148
C+ C C H
Sbjct: 138 NCEMPTCSLCKVFGAHKD 155
>gi|297850596|ref|XP_002893179.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339021|gb|EFH69438.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1579
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL +DG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSFDGESTVPRVLACGHTACEECLTNLP---KKFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>gi|114052761|ref|NP_001039760.1| E3 ubiquitin-protein ligase TRIM63 [Bos taurus]
gi|86438438|gb|AAI12722.1| Tripartite motif-containing 63 [Bos taurus]
gi|296490005|tpg|DAA32118.1| TPA: tripartite motif-containing 63 [Bos taurus]
Length = 355
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI------------AASQTRETGTL 75
E L C CL M+ +LPC H +C C + I S G
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQQAANPYWTGRVGSAAMSGGRF 74
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LF 128
RCP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++
Sbjct: 75 RCPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIY 134
Query: 129 CETCDTVFCLQCTGGSNHSS 148
C TC+ C C H +
Sbjct: 135 CLTCEVPTCSMCKVFGAHKA 154
>gi|13160386|emb|CAC32840.1| ring finger protein 29 [Homo sapiens]
Length = 532
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C S I + G R
Sbjct: 5 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFR 61
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R GV L + LV ++D+ + +++ P C H + + ++C
Sbjct: 62 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 121
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 122 NCEVPTCSLC 131
>gi|198457486|ref|XP_001360687.2| GA13495 [Drosophila pseudoobscura pseudoobscura]
gi|198135998|gb|EAL25262.2| GA13495 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|195335764|ref|XP_002034533.1| GM21929 [Drosophila sechellia]
gi|194126503|gb|EDW48546.1| GM21929 [Drosophila sechellia]
Length = 720
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|195150695|ref|XP_002016286.1| GL11502 [Drosophila persimilis]
gi|194110133|gb|EDW32176.1| GL11502 [Drosophila persimilis]
Length = 1349
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 58 PYNGVQAFPTNVTLQRFLEL 77
>gi|395843918|ref|XP_003794718.1| PREDICTED: tripartite motif-containing protein 59-like, partial
[Otolemur garnettii]
Length = 141
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL + + L+CP CR
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|301614337|ref|XP_002936657.1| PREDICTED: hypothetical protein LOC100491611 [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 8 TLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS 67
++ S + ++++Y+++ C C +D PKLL C HT C CL+ +
Sbjct: 2 AVNQASGMGSDITLSYDEYE-----CKICYNYFDLDRRAPKLLECLHTFCQECLNTLHRR 56
Query: 68 QTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQR----RHIIPKCSTHNS 123
+ R L CP+CR + +P V ALP + V + L R + I+P + H
Sbjct: 57 EDRPW-RLSCPVCRHRTVVPDSRVDALPINTKVAEAFPLYVRPDDPFPQDILPPITYHQQ 115
Query: 124 QELLF 128
+ L +
Sbjct: 116 RGLQY 120
>gi|357622762|gb|EHJ74161.1| hypothetical protein KGM_17545 [Danaus plexippus]
Length = 1198
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
ES LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 ESLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV P + + + L+L
Sbjct: 58 PYQGVQGFPTNVTLQRFLEL 77
>gi|18266714|ref|NP_543179.1| E3 ubiquitin-protein ligase TRIM63 [Rattus norvegicus]
gi|81175038|sp|Q91Z63.1|TRI63_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM63; AltName:
Full=Muscle-specific RING finger protein 1;
Short=MuRF-1; Short=MuRF1; AltName: Full=Tripartite
motif-containing protein 63
gi|16444656|gb|AAL16405.1| muscle ring finger protein 1 [Rattus norvegicus]
gi|38197350|gb|AAH61824.1| Tripartite motif-containing 63 [Rattus norvegicus]
gi|149024220|gb|EDL80717.1| tripartite motif protein 63 [Rattus norvegicus]
Length = 351
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSLCKVFGAHQA 153
>gi|328719579|ref|XP_001944980.2| PREDICTED: hypothetical protein LOC100167755 [Acyrthosiphon pisum]
Length = 1280
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICRE 82
E F++ LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR
Sbjct: 2 EQFDQ-LLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRA 53
Query: 83 QITIPRGGVAALPPSFLVNQLLDL 106
+ IP GV P + + + L+L
Sbjct: 54 EHRIPYNGVQGYPTNVTLQRFLEL 77
>gi|410966414|ref|XP_003989728.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63 [Felis catus]
Length = 353
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPFWTNRVGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGNHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEMPTCSMCKVFGAHKA 153
>gi|148698070|gb|EDL30017.1| mCG12943, isoform CRA_a [Mus musculus]
Length = 299
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSLCKVFGAHQA 153
>gi|260785676|ref|XP_002587886.1| hypothetical protein BRAFLDRAFT_87273 [Branchiostoma floridae]
gi|229273041|gb|EEN43897.1| hypothetical protein BRAFLDRAFT_87273 [Branchiostoma floridae]
Length = 392
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITIPRG 89
LTC CL ++ PK+LPC HT C CL +A L+C +CR+Q+ +P
Sbjct: 16 LTCSICLELFT----RPKMLPCQHTFCQSPCLENLAVRGR----ALKCAVCRQQVRLPPQ 67
Query: 90 GVAALPPSFLVNQLLDLMSR 109
GV LP + + +L+ + +
Sbjct: 68 GVTGLPDNLMAGNMLERLQQ 87
>gi|390356913|ref|XP_003728887.1| PREDICTED: uncharacterized protein LOC100893496 [Strongylocentrotus
purpuratus]
Length = 307
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C C G + LPC HT C CL+R +A+ T G ++C C+ + +P
Sbjct: 10 EEMLKCSVC----QGRIKDARSLPCGHTYCKDCLTR-SANATYPPGGIQCAECQNRYQLP 64
Query: 88 RGGVAALPPSFLVNQLLD 105
GG LP F +N LLD
Sbjct: 65 FGGAEGLPRCFAINSLLD 82
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E+F +C CL + + LPC H+ C CL Q R T ++C C + IP
Sbjct: 105 ETF-SCAFCLNLM----RDARYLPCGHSFCRECLK----MQPRTTPCIKCSKCLKDHNIP 155
Query: 88 RGGVAALPPSFLVNQLL 104
G+ LP ++ +N ++
Sbjct: 156 ARGIDGLPVAYRINSIV 172
>gi|426342713|ref|XP_004037979.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Gorilla gorilla gorilla]
gi|426342717|ref|XP_004037981.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Gorilla gorilla gorilla]
gi|426342719|ref|XP_004037982.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Gorilla gorilla gorilla]
gi|426342721|ref|XP_004037983.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Gorilla gorilla gorilla]
gi|426342723|ref|XP_004037984.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Gorilla gorilla gorilla]
gi|426342725|ref|XP_004037985.1| PREDICTED: tripartite motif-containing protein 59 isoform 7
[Gorilla gorilla gorilla]
Length = 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I GV +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SITEIAPTGVESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|410909079|ref|XP_003968018.1| PREDICTED: tripartite motif-containing protein 55-like [Takifugu
rubripes]
Length = 384
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 25/154 (16%)
Query: 17 ETVSI--NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---------- 64
+TV I N D E L C CL M+ +LPC H +C C + I
Sbjct: 7 QTVVIPPNNMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQASNPYLPT 63
Query: 65 AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---------QRRHII 115
A G RCP CR ++ + R GV L + LV ++D+ + +R+ +
Sbjct: 64 RAGSLTSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESSSGKPVEERKEQM 123
Query: 116 PKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSS 148
P C H +++ ++C T C C H
Sbjct: 124 PMCDVHEGEKINIYCITHAVPTCSMCKIFGAHKD 157
>gi|300116147|ref|NP_001177812.1| midline 1 (Opitz/BBB syndrome) [Xenopus laevis]
gi|298359661|gb|ADI77436.1| midline 1 [Xenopus laevis]
Length = 668
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCANNESVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR------------QRRHIIPKCSTHNSQELLFC 129
IT+ + G+ L + + ++D + +R ++ S E + C
Sbjct: 61 YVITLSKRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAYDTTNSMTSSEKVLC 120
Query: 130 ETCD 133
+ CD
Sbjct: 121 QFCD 124
>gi|124244070|ref|NP_001034137.2| E3 ubiquitin-protein ligase TRIM63 [Mus musculus]
gi|162318766|gb|AAI57097.1| Tripartite motif-containing 63 [synthetic construct]
gi|162319122|gb|AAI56344.1| Tripartite motif-containing 63 [synthetic construct]
Length = 355
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSLCKVFGAHQA 153
>gi|431922636|gb|ELK19556.1| RING finger protein 183 [Pteropus alecto]
Length = 267
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETG--TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q + G + CP CR+
Sbjct: 56 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAATQPAGQPGGEAVPCPFCRQPTA 115
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 116 VPPAGAPAL 124
>gi|55742208|ref|NP_001006876.1| midline 1 (Opitz/BBB syndrome) [Xenopus (Silurana) tropicalis]
gi|49899992|gb|AAH76998.1| midline 1 (Opitz/BBB syndrome) [Xenopus (Silurana) tropicalis]
Length = 668
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCANNESVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSR------------QRRHIIPKCSTHNSQELLFC 129
IT+ + G+ L + + ++D + +R ++ S E + C
Sbjct: 61 YVITLSKRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAYDTTNSMTSSEKVLC 120
Query: 130 ETCD 133
+ CD
Sbjct: 121 QFCD 124
>gi|390341002|ref|XP_003725352.1| PREDICTED: uncharacterized protein LOC100892327 [Strongylocentrotus
purpuratus]
Length = 712
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C CL ++D +L C HT C CL R A+ R+ + CP+CR+ +
Sbjct: 13 ILCPLCLDVFD----NASMLICGHTFCKQCLERYDAAH-RDLDHMMCPLCRKVTKLDESR 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHI------IPKCSTHNSQ--ELLFCETCDTVFCLQCTG 142
V LP +F V L+D I PKC+ Q + FC C C +C
Sbjct: 68 VTGLPANFTVKGLVDEYHGSHGGINAVLEGQPKCTACELQGDAVSFCYECGNYMCAKCDH 127
Query: 143 GSNHSS-TSGDSEHTIIPFSIAIKRMSEI 170
G HS TS H ++ ++ + I
Sbjct: 128 G--HSQLTSFFKGHQVVSMKDVVEGTASI 154
>gi|47222746|emb|CAG01713.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICREQITI 86
C C YD TPK L C+HT CL CLSR+ A + + + CP+CR T+
Sbjct: 31 CSICYTTYDNVFKTPKELDCTHTFCLECLSRLMALSPADQDSDHPLKHISCPLCRRTTTL 90
Query: 87 PRGGVAALPPSFLVN-QLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSN 145
P+ G PP+ N ++L + ++H P C + C+ G
Sbjct: 91 PKEG----PPALTTNHEVLRKLPHHQQHEEPVWLEGEK----LCYKSNGYVCIDIGGSET 142
Query: 146 HSSTSGDSEHTIIPFSI 162
++ S S + P +I
Sbjct: 143 AAAPSQPSWGSRWPMAI 159
>gi|344254095|gb|EGW10199.1| E3 ubiquitin-protein ligase TRIM63 [Cricetulus griseus]
Length = 355
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 5 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 61
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 62 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 121
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 122 LTCEVPTCSLCKVFGAHQA 140
>gi|291235470|ref|XP_002737667.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 638
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ ++SFL C C Y K+LPC H+ C C+ ++ Q + CP+CR
Sbjct: 10 EEIDDSFLVCTVCSERY----RNAKILPCLHSFCEQCIHKLV--QKSGGKNIPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD----TVFCLQ 139
+P G + FL N+L+ L+ +Q+ + E+ CE C T C+
Sbjct: 64 HDLPEGASSVQSNVFL-NELVVLLGKQK--------DKKTNEVQTCEGCQRDPMTTHCID 114
Query: 140 CTGG 143
C G
Sbjct: 115 CAIG 118
>gi|403335137|gb|EJY66741.1| Kelch motif family protein [Oxytricha trifallax]
gi|403376180|gb|EJY88072.1| Kelch motif family protein [Oxytricha trifallax]
Length = 751
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+ C +C +D P+ L C HT C CL +I E CPICR + P
Sbjct: 1 MECPSCYEYFDDITRVPRNLNCGHTFCEECLVKI-----EEQKMTFCPICRTALQKPFKA 55
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPK---CSTHNSQELL--FCETCDTVFCLQC 140
LP +F+ LD +Q + I+ K C+ H ++EL+ +C TC + C++C
Sbjct: 56 -KKLPKNFIA---LDYAVKQ-QEILKKSNFCAVH-TKELMRHYCITCKHLICIEC 104
>gi|84029592|sp|Q38HM4.1|TRI63_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM63; AltName:
Full=Muscle-specific RING finger protein 1;
Short=MuRF-1; Short=MuRF1; Short=Muscle RING finger
protein 1; AltName: Full=Tripartite motif-containing
protein 63
gi|77997474|gb|ABB16283.1| muscle RING finger protein 1 [Mus musculus]
Length = 350
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSLCKVFGAHQA 153
>gi|74187300|dbj|BAE22636.1| unnamed protein product [Mus musculus]
Length = 260
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|255558580|ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223540534|gb|EEF42101.1| F-box and wd40 domain protein, putative [Ricinus communis]
Length = 1794
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL + + T+RCP C + + P G +
Sbjct: 6 CPVCLQNYDGEYAIPRVLTCGHTTCESCLKSLPQKYPQ---TIRCPACVQLVKFPSLGPS 62
Query: 93 ALPPSFLVNQLLDLMSRQRRHI 114
+LP + + +L+ ++++ I
Sbjct: 63 SLPKNIDLLRLIPTNHKKKQPI 84
>gi|31874062|emb|CAD97947.1| hypothetical protein [Homo sapiens]
Length = 323
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT----------LRC 77
E LTC C +++ P++LPCSHT C +CL I + +G L+C
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQA----SGNFYIWRPLRIPLKC 56
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVF 136
P CR I G+ +LP +F + +++ ++ I C H Q L ++C +
Sbjct: 57 PNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLV 116
Query: 137 CLQC-TGGSNHSSTSGD 152
C C T G +H D
Sbjct: 117 CGHCLTIGQHHGHPIDD 133
>gi|449445035|ref|XP_004140279.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Cucumis sativus]
Length = 1621
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
+C C +D +P LL C HT C HCLS+I A T +L CP CR TI V
Sbjct: 12 SCSICRIHFDEDSRSPLLLQCGHTFCKHCLSQIIAP-TSPKPSLTCPKCRHVSTIG-NSV 69
Query: 92 AALPPSFLV 100
+LP +F +
Sbjct: 70 LSLPKNFAI 78
>gi|291237713|ref|XP_002738777.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 676
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ +E LTC CL Y P++LPC H+ C CL ++ + T++CP CR+
Sbjct: 31 DEIDEDLLTCSVCLERY----KNPQILPCYHSFCEQCLVKLKGPR----DTIKCPNCRQL 82
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC 118
+ + L PS ++N ++D++ + H I +C
Sbjct: 83 HYV--SNMQQLSPSTIINSVIDII---KEHEIQRC 112
>gi|348570756|ref|XP_003471163.1| PREDICTED: E3 ubiquitin-protein ligase TRIM63-like [Cavia
porcellus]
Length = 496
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL ++ +LPC H +C C + I + S + G R
Sbjct: 18 EKQLICPICLELFT---KPVVILPCQHNLCRKCANDIFQAANPYWTTRSGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSMCKVFGAHQA 153
>gi|326931128|ref|XP_003211686.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Meleagris
gallopavo]
Length = 818
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D E L C CL ++ P +L C H+ C C+ ++ + CP+CR+ +
Sbjct: 8 DNLEDQLLCPICLEVF----KEPLMLQCGHSYCKSCVLSLSGELDEQ---FLCPVCRKSV 60
Query: 85 TIPRGGVAALPPSFLVNQLLD-LMSRQRRHIIPK-CSTHNSQELLFCETCDTVFCLQCTG 142
+A PP+ + ++++ L SR P+ C TH++ LFCE V C C
Sbjct: 61 D-----CSASPPNVTLARIIEALQSRGETEPTPESCPTHHNPLSLFCEADREVICGLCGT 115
Query: 143 GSNHSSTSGDSEHTIIPFSIAIKRMSE---ILLYKANEC 178
NH +H I P S A RM E +LL + C
Sbjct: 116 IGNH------KQHKITPISTAYCRMKEELSVLLTDVHRC 148
>gi|30585345|gb|AAP36945.1| Homo sapiens ring finger protein 29 [synthetic construct]
gi|60653167|gb|AAX29278.1| ring finger protein 29 [synthetic construct]
Length = 437
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C S I + G R
Sbjct: 5 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFR 61
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R GV L + LV ++D+ + +++ P C H + + ++C
Sbjct: 62 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 121
Query: 131 TCDTVFCLQCTGGSNHSS 148
C+ C C H
Sbjct: 122 NCEVPTCSLCKVFGAHKD 139
>gi|13160385|emb|CAC32839.1| ring finger protein 29 [Homo sapiens]
gi|30583263|gb|AAP35876.1| ring finger protein 29 [Homo sapiens]
gi|60656219|gb|AAX32673.1| ring finger protein 29 [synthetic construct]
gi|60656221|gb|AAX32674.1| ring finger protein 29 [synthetic construct]
Length = 436
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C S I + G R
Sbjct: 5 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFR 61
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R GV L + LV ++D+ + +++ P C H + + ++C
Sbjct: 62 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 121
Query: 131 TCDTVFCLQCTGGSNHSS 148
C+ C C H
Sbjct: 122 NCEVPTCSLCKVFGAHKD 139
>gi|449481166|ref|XP_004156101.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Cucumis sativus]
Length = 1638
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
+C C +D +P LL C HT C HCLS+I A T +L CP CR TI V
Sbjct: 12 SCSICRIHFDEDSRSPLLLQCGHTFCKHCLSQIIAP-TSPKPSLTCPKCRHVSTIG-NSV 69
Query: 92 AALPPSFLV 100
+LP +F +
Sbjct: 70 LSLPKNFAI 78
>gi|291244926|ref|XP_002742330.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 136
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ +E L C C + +PK+LPC HT C HCL + G L CP C+E
Sbjct: 16 EIDEQLLLCPICYSRF----KSPKILPCFHTFCEHCLDEWVGTN---NGKLVCPTCKEDT 68
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHII-----PKCSTHNSQELLFCETCDTVFCLQ 139
+ GV + + + LL+L+S II +C + ++C C FC
Sbjct: 69 PLTSRGVKGIRENRFIADLLNLVS----DIIDISNDAQCENCTNVATIWCNDCAQFFCDD 124
Query: 140 C 140
C
Sbjct: 125 C 125
>gi|390347644|ref|XP_003726832.1| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 158
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK L CSH C CL + + LRCP+CR + +
Sbjct: 13 LECPVCLNTFTN----PKTLSCSHNYCKACLDNLLECHGNDQ-MLRCPVCRAETQVLNQD 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNS-QELLFCETCDTVFCLQCTGGSNHSST 149
V+ LP + + L++ + Q H+ C + + Q +++C+ C C+ C + HS
Sbjct: 68 VSKLPTNLALKSLIEDVKNQ-YHLCSICKSEDKPQAVVYCQDCGKYLCITC--NNTHSLW 124
Query: 150 SGDSEHTIIPFS 161
H ++ S
Sbjct: 125 QDFISHEVLAMS 136
>gi|321471275|gb|EFX82248.1| hypothetical protein DAPPUDRAFT_316924 [Daphnia pulex]
Length = 871
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F F+TC C+ Y+ PK+LPCSHTVC CL I + + CP CR+
Sbjct: 5 FENDFVTCSICMNEYNEYTRKPKVLPCSHTVCFTCLQGIF-----QDNAIACPYCRQSFK 59
Query: 86 IPRGG 90
+ GG
Sbjct: 60 L--GG 62
>gi|405969073|gb|EKC34083.1| Tripartite motif-containing protein 54 [Crassostrea gigas]
Length = 614
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 69/180 (38%), Gaps = 33/180 (18%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-----TLRCPICREQIT 85
L C CL +D P +LPCSH C CL I +++ + T + CP+C+ +I
Sbjct: 5 LMCAICLEFFD----EPLMLPCSHNFCKKCLQGIISARDQYTNYRSQRYVDCPLCQRKIP 60
Query: 86 IPRGGVAALPPSFLVNQLLDLM-----------------SRQRRHIIPKCSTHNSQELLF 128
+ R GV P VN+ LD + S C H Q +
Sbjct: 61 LERSGVDQFP----VNRALDNVVCVYKAEAEVTFNDASWSVDVSESAGLCRLHREQLNFY 116
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPER 188
C +C+ C +C S + + H P + R +L +E KN + +R
Sbjct: 117 CLSCNMAVCRECKCISQKDAGAS---HRFSPIKEQLHRSQTSILASLSEIKKKNVMLNDR 173
>gi|390340193|ref|XP_003725189.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 346
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + P LL C HT C CL + + R + CP+C+++ + +
Sbjct: 13 LACPLCLDAFK----VPTLLFCGHTFCKVCLDKYD-THYRGQDFMECPVCKKRTKLEKNR 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPK--------CSTHNS-QELLFCETCDTVFCLQC 140
VA L P+F V L + + H+ P+ CS H+ + + CE C CL C
Sbjct: 68 VAGLAPNFSVKGLEEEL-----HVHPRANGKSSEYCSLHSKVYKDILCEVCKEFICLSC 121
>gi|158286215|ref|XP_308626.4| AGAP007135-PA [Anopheles gambiae str. PEST]
gi|157020362|gb|EAA04156.5| AGAP007135-PA [Anopheles gambiae str. PEST]
Length = 1351
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLIDYVKRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
P GV P + + + L+L ++ +C+ + + C CD C
Sbjct: 58 PYQGVQGFPTNVTLQRFLELHIEITGELPDPTSGQVMERCNVCSEKAYCALCVHCDKKIC 117
Query: 138 LQCTG 142
C G
Sbjct: 118 ADCKG 122
>gi|147905260|ref|NP_001085095.1| tripartite motif containing 54 [Xenopus laevis]
gi|47939944|gb|AAH72166.1| MGC80214 protein [Xenopus laevis]
Length = 360
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 22/140 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I +S G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQASNPLWQSRGSSTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-RRHIIPK------CSTHNSQEL-LF 128
CP CR ++ + R GV L + LV ++D+ ++ R + PK C H +++ ++
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPMNPKSEQHLMCEEHEDEKINIY 137
Query: 129 CETCDTVFCLQCTGGSNHSS 148
C +C+ C C H
Sbjct: 138 CLSCEVPTCSMCKVFGAHKD 157
>gi|405965447|gb|EKC30823.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 655
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 7/137 (5%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
D N L CG C Y+ P++L C HT C CL + S T + CP+C I
Sbjct: 6 DSNSDPLMCGLCHKRYND----PRILDCFHTYCCECLEKHVQS-THSKVSFPCPMCHMDI 60
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGS 144
IP+ GV L +F V + C Q C C++ C C S
Sbjct: 61 HIPKAGVKGLHQNFYVRAIQASAVFSTNSKCDSCKESEKQAHSRCLECNSNMCKPCI--S 118
Query: 145 NHSSTSGDSEHTIIPFS 161
HS + +H ++ S
Sbjct: 119 RHSKANETRDHHVVELS 135
>gi|25151067|ref|NP_740796.1| Protein Y51F10.2 [Caenorhabditis elegans]
gi|373220546|emb|CCD73473.1| Protein Y51F10.2 [Caenorhabditis elegans]
Length = 305
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCL------SRIAASQ---TRETGTLRCPICRE 82
+C CL +D G+H PK+L C+HTVC C+ SRI ++ R +RCP+CR
Sbjct: 18 SCRICLEPFDEGQHLPKILQCAHTVCERCIGLLDEQSRINHNRPPIDRSFVHIRCPVCRA 77
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVF 136
PR + + ++ + +L+D M + H I L C C+ V+
Sbjct: 78 VTQTPRNYIRS---NYQLIELMDSMRGEADHNI---------SFLACVGCNGVY 119
>gi|449280361|gb|EMC87688.1| Tripartite motif-containing protein 13, partial [Columba livia]
Length = 410
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R +CP CR++
Sbjct: 7 EEDLTCPICCSLFDD----PRVLPCSHNFCRKCLEGILEGNVRNVLWRPSPFKCPTCRKE 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH-IIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
P GV +L ++ + +++ ++ + +P C H+ Q L +FC T + C C
Sbjct: 63 --TPVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCA 120
Query: 142 GGSNHSS 148
+H+
Sbjct: 121 TRGDHTK 127
>gi|410897407|ref|XP_003962190.1| PREDICTED: tripartite motif-containing protein 54-like [Takifugu
rubripes]
Length = 357
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 25/143 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLDMF---TKPVVILPCQHNLCRSCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ------------------RRHIIPKCSTHNSQEL 126
+ R GV L + LV ++D+ +Q + P C H +++
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQELSGGGGGGNTETSLKTKESNEPMCQEHEGEKI 136
Query: 127 -LFCETCDTVFCLQCTGGSNHSS 148
++C TC C C H
Sbjct: 137 NIYCVTCQVPTCSLCKVFGQHKD 159
>gi|47207992|emb|CAF91694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 352
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 23/136 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI----------AASQTRETGT 74
D E L C CL M+ +LPC H +C C + I A G
Sbjct: 2 DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQASNPYLPTRAGSLTSGGR 58
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---------QRRHIIPKCSTHNSQE 125
RCP CR ++ + R GV L + LV ++D+ + +R+ +P C H ++
Sbjct: 59 FRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESSSSKPVEERKEHVPMCDVHEEEK 118
Query: 126 L-LFCETCDTVFCLQC 140
+ ++C T C C
Sbjct: 119 INIYCVTHGVPTCSMC 134
>gi|390369496|ref|XP_003731650.1| PREDICTED: uncharacterized protein LOC100890066 [Strongylocentrotus
purpuratus]
Length = 308
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C C G + LPC HT C CL+R +A+ T G+++C C++ +P
Sbjct: 10 EEMLKCSAC----QGRIKDTRSLPCGHTFCSDCLAR-SANATYPRGSIQCAECKKTSQLP 64
Query: 88 RGGVAALPPSFLVNQLLD 105
GG LP F +N LLD
Sbjct: 65 FGGAEGLPRCFAINSLLD 82
>gi|260826253|ref|XP_002608080.1| hypothetical protein BRAFLDRAFT_91442 [Branchiostoma floridae]
gi|229293430|gb|EEN64090.1| hypothetical protein BRAFLDRAFT_91442 [Branchiostoma floridae]
Length = 401
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKL-LPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
++ FL C CL + G PK+ LPC HT CL + Q +E CP CR +
Sbjct: 10 ISDDFLECTICLEPFKG----PKVGLPCLHTFYKGCLEKCVTQQGKEQ--FPCPTCRSET 63
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD 133
+P GGV +F V L D + R + ++ K + + C+ CD
Sbjct: 64 VLPEGGVTGFKDNFFVVSLSDTI-RSHKSLLSK-----GDDKVLCDLCD 106
>gi|148698071|gb|EDL30018.1| mCG12943, isoform CRA_b [Mus musculus]
Length = 277
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSLCKVFGAHQA 153
>gi|223461997|gb|AAI47667.1| Tripartite motif-containing 63 [Mus musculus]
gi|223462153|gb|AAI47664.1| Tripartite motif-containing 63 [Mus musculus]
Length = 343
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETGTLR 76
E L C CL M+ +LPC H +C C + I S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQCTGGSNHSS 148
TC+ C C H +
Sbjct: 135 LTCEVPTCSLCKVFGAHQA 153
>gi|198430730|ref|XP_002126068.1| PREDICTED: similar to ring finger protein Fxy [Ciona intestinalis]
Length = 945
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-------TLRCPIC 80
E+ LTC CL ++ H P LLPC+H +C C+ + +S R +G T +CP C
Sbjct: 235 ENELTCPICLDLF----HEPILLPCAHNLCAGCVEQFVSSH-RTSGDQSGFRPTFKCPTC 289
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP 116
RE IT+ G L + + ++D R + P
Sbjct: 290 REMITLDSRGANGLRRNLTLQNIVDGYRRAAASVSP 325
>gi|432865841|ref|XP_004070640.1| PREDICTED: nuclear factor 7, ovary-like [Oryzias latipes]
Length = 521
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 24/187 (12%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL +++ +P +LPC H+ C C++ SQ +CP+CR +
Sbjct: 10 LNCPLCLSLFN----SPVVLPCGHSFCSPCITEALGSQQ------QCPLCRSAVAAEEA- 58
Query: 91 VAALPPSFLVNQLLDLMSRQRR--HIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSS 148
LP + ++ L++ R+ + C H + LFC T + C+ C G H
Sbjct: 59 -KCLPANLILKSLVEKAQREEQAAKAAGMCPEHEEKFKLFCLTDLQLACIICRDGEKHEG 117
Query: 149 TSGDSEHTIIPFSIAIKRMS---EILLYKANECVS-KNKVCPERKSNLRPSAHKADAYVR 204
H P A + + E+ L E ++ ++ ++ NLR + K+ +
Sbjct: 118 ------HRFKPIREAAQSLRTDLEMFLQSVAEDINVMEQLAKAQQENLRVTGEKSKQLMV 171
Query: 205 RRGAHTQ 211
+ G Q
Sbjct: 172 QIGRQFQ 178
>gi|260790177|ref|XP_002590120.1| hypothetical protein BRAFLDRAFT_83399 [Branchiostoma floridae]
gi|229275308|gb|EEN46131.1| hypothetical protein BRAFLDRAFT_83399 [Branchiostoma floridae]
Length = 391
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP- 87
+ C CL +Y PK+LPC HT C+ CL S + +L+CP+C++ +
Sbjct: 15 TIFECSICLQVYT----RPKVLPCGHTFCMECL----VSFVNGSKSLKCPVCQKNTNLKK 66
Query: 88 --RGGVAALPPSF-LVNQLLDLMSRQRRH-----------IIPK-----CSTHNSQEL-L 127
R GV L + L N D R H +P S H +EL
Sbjct: 67 AGRAGVEVLTDNIPLANLRGDAKISARSHDRGPNGAENPTAVPGESMCPNSEHRGEELRY 126
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSE 169
+C +CD V C +C ++ T+ SI K +SE
Sbjct: 127 YCPSCDAVICEKCWFEEHNDHGVNRLRETLPEQSIKAKEVSE 168
>gi|431915178|gb|ELK15865.1| Tripartite motif-containing protein 59 [Pteropus alecto]
Length = 402
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------L 75
N+ED LTC C +++ P++LPCSHT C +CL + + L
Sbjct: 3 NFEDE----LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ + C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDLITCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>gi|405968424|gb|EKC33497.1| B-box type zinc finger protein ncl-1 [Crassostrea gigas]
Length = 939
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDL 106
PK+L C H C CL L C IC++ IP GG+AAL P ++++ LL++
Sbjct: 91 PKILNCLHVFCQTCLEN---ENEDAKDVLSCSICKQDTKIPPGGIAALQPEYVISDLLEI 147
Query: 107 MSRQRRHIIPKCSTHNSQELLFCETC--DTVFCLQCT 141
+ + + I+ + + C C C C
Sbjct: 148 AAIEDKQILCNSCKAKEKAVARCRDCISGNYLCANCV 184
>gi|85702270|ref|NP_001030078.1| tripartite motif-containing protein 43A [Mus musculus]
gi|123796605|sp|Q3TL54.1|TR43A_MOUSE RecName: Full=Tripartite motif-containing protein 43A
gi|74177676|dbj|BAE38938.1| unnamed protein product [Mus musculus]
gi|74216884|dbj|BAE26563.1| unnamed protein product [Mus musculus]
Length = 445
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 79/203 (38%), Gaps = 23/203 (11%)
Query: 20 SINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
S N +D E LTC C ++ P L C H C CL SQ CP+
Sbjct: 3 SDNLQDPQEETLTCSICQSIF----MNPVYLRCGHKFCEACL---LLSQEDIKFPAYCPM 55
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMS--RQRRHIIPKCSTHNSQELLFCETCDTVFC 137
C + +L + + LM + H KC TH +++++FC+ + C
Sbjct: 56 CMQPFNQEYINDISLKKQVSIVRKKRLMKYLNSKEH---KCVTHKAKKMIFCDKSKILLC 112
Query: 138 LQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC-----VSKNKVCPERKSNL 192
C+ HS HT +A++ E LL + + +N V ER++ L
Sbjct: 113 HLCSDSQEHSG------HTHCSIDVAVQEKMEELLKHMDSLWRRLKIQQNYVEIERRTTL 166
Query: 193 RPSAHKADAYVRRRGAHTQTPPL 215
+ K V +R Q PPL
Sbjct: 167 WWLSVKLREEVIKRVYGKQCPPL 189
>gi|301101459|ref|XP_002899818.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102820|gb|EEY60872.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 735
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 23 YEDFNESFLTCGTCLCMYDGGE----HTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
+ +F +S + C C YD + H P+LL C HT C CL A +TG L CP
Sbjct: 21 WSEFADSGVECELCNEPYDDDDSDEGHIPRLLTCGHTYCQSCLDGWATHTGSQTGELECP 80
Query: 79 ICREQITIPRG--GVAALPPSF 98
CR ++T G G ALP ++
Sbjct: 81 TCR-RVTRLEGSAGARALPKNY 101
>gi|148708743|gb|EDL40690.1| mCG50212 [Mus musculus]
Length = 255
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T +S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|363729270|ref|XP_001232573.2| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Gallus
gallus]
Length = 409
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R +CP CR++
Sbjct: 6 EEDLTCPICCSLFDD----PRVLPCSHNFCRKCLEGILDGNVRNVLWRPSPFKCPTCRKE 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH-IIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
P GV +L ++ + +++ ++ + +P C H+ Q L +FC T + C C
Sbjct: 62 --TPVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCA 119
Query: 142 GGSNHSS 148
+H+
Sbjct: 120 TRGDHTK 126
>gi|73958041|ref|XP_850838.1| PREDICTED: tripartite motif-containing protein 4 [Canis lupus
familiaris]
Length = 475
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+ ED E LTC CL ++ P + C H C CL R S G+ CP C
Sbjct: 1 MEAEDLQED-LTCSICLDYFE----EPVSIECGHNFCRGCLHR---SWAPGGGSFPCPEC 52
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP--KCSTHNSQELLFCETCDTVFCL 138
R ++ P A+L P++ + +L + R+R+ +P +C H LFCE CL
Sbjct: 53 R-HLSPP----ASLRPNWALARLTEKTRRRRQGPVPPGQCGRHREALRLFCEEDQRPVCL 107
Query: 139 QCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKV 184
C H + HT+ P A + L +C K+K+
Sbjct: 108 VCRESQEHQA------HTMAPIDEAFGSYRDKLC--KTQCSLKDKI 145
>gi|317419904|emb|CBN81940.1| Tripartite motif-containing protein 55 [Dicentrarchus labrax]
Length = 372
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-----TR-----ETGT 74
D E L C CL M+ +LPC H +C C + I + TR G
Sbjct: 2 DNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFTASNPYLPTRGGSLTSGGR 58
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR---------QRRHIIPKCSTHNSQE 125
RCP CR ++ + R GV L + LV ++D+ + +R+ +P C H ++
Sbjct: 59 FRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESSSSKPAPERKQEMPMCEVHEEEK 118
Query: 126 L-LFCETCDTVFCLQCTGGSNHSS 148
+ ++C T C C H
Sbjct: 119 INIYCVTHGVPTCSMCKVFGAHKD 142
>gi|31565626|gb|AAH53704.1| Mid1 protein [Mus musculus]
Length = 445
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT + G+ L + + ++D S RR T +S E + C+
Sbjct: 61 HVITPSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDADTMSSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|322790124|gb|EFZ15151.1| hypothetical protein SINV_06003 [Solenopsis invicta]
Length = 337
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 6 EQLLTCAICLDRY----RNPKLLPCQHSFCMEPCMDGLVDYVRRQ---VKCPECRAEHRI 58
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P GV A P + + + L+L
Sbjct: 59 PYQGVQAFPTNVTLQRFLEL 78
>gi|50730893|ref|XP_417067.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Gallus
gallus]
Length = 416
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R +CP CR++
Sbjct: 13 EEDLTCPICCSLFDD----PRVLPCSHNFCRKCLEGILDGNVRNVLWRPSPFKCPTCRKE 68
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH-IIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
P GV +L ++ + +++ ++ + +P C H+ Q L +FC T + C C
Sbjct: 69 --TPVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCA 126
Query: 142 GGSNHSS 148
+H+
Sbjct: 127 TRGDHTK 133
>gi|312385418|gb|EFR29928.1| hypothetical protein AND_00800 [Anopheles darlingi]
Length = 1298
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLIDYVKRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDLMSR--------QRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
P GV P + + + L+L I+ +C+ + + C CD C
Sbjct: 58 PYQGVQGFPTNVTLQRFLELHIEITGELPDPTSGQIMERCNVCSEKAYCALCVHCDKKIC 117
Query: 138 LQCTG 142
C G
Sbjct: 118 PDCKG 122
>gi|301618670|ref|XP_002938721.1| PREDICTED: hypothetical protein LOC100487311 [Xenopus (Silurana)
tropicalis]
Length = 208
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI-PRGGV 91
C C YD H PK L C H CL CLSRI T+ TL CPICR ++ P+ G
Sbjct: 18 CIICFTPYDSLFHLPKTLSCKHIFCLECLSRITVGSTQPE-TLSCPICRLPTSLPPKKG- 75
Query: 92 AALPPSFLVNQ-LLDLMSRQRRHIIPKCSTHNSQELLFCETCDTV 135
PP+ +Q LL+ +++ P + LL+ + +++
Sbjct: 76 ---PPALSTDQNLLNSINKPPNSPAPSVRFSRKRGLLYVQKTNSL 117
>gi|113679514|ref|NP_001038816.1| RING finger protein 182 [Danio rerio]
gi|112418713|gb|AAI22280.1| Zgc:153414 [Danio rerio]
Length = 248
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F L C C C Y PK+L C H +C CL++I + CP CR
Sbjct: 13 FTTEELECKICYCAYSLSSRRPKVLKCCHCLCAKCLAKIHDLGESSPNAVICPFCRYITE 72
Query: 86 IPRGGVAALPPSF-LVNQLLDLMSRQRRHI 114
+PR V +LP + LV+ LL R+ ++
Sbjct: 73 LPREDVDSLPDEYNLVSALLSFQMRKSHNL 102
>gi|27436877|ref|NP_775107.1| tripartite motif-containing protein 59 [Homo sapiens]
gi|74714421|sp|Q8IWR1.1|TRI59_HUMAN RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 104; AltName: Full=Tumor
suppressor TSBF-1
gi|27358012|gb|AAN86853.1| tumor suppressor TSBF1 [Homo sapiens]
gi|80475903|gb|AAI09260.1| Tripartite motif-containing 59 [Homo sapiens]
gi|80478299|gb|AAI09261.1| Tripartite motif-containing 59 [Homo sapiens]
gi|119599041|gb|EAW78635.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599042|gb|EAW78636.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599043|gb|EAW78637.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599044|gb|EAW78638.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|158256004|dbj|BAF83973.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I + L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I G+ +LP +F + +++ ++ I C H Q L ++C + C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GHCLTIGQHHGHPIDD 133
>gi|341875668|gb|EGT31603.1| hypothetical protein CAEBREN_17726 [Caenorhabditis brenneri]
Length = 367
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHT--PKLLP-CSHTVCLHCLSRIAASQTRETGTLRCP 78
N++ E F+ C C + + P++ P C H+ CL CL IA + + T RCP
Sbjct: 6 NWQTTCEGFV-CSICWTNFSATDSAMKPRVAPQCGHSFCLGCLEAIARTSRTQPPTTRCP 64
Query: 79 ICREQITI-PRGGVAALPPSFLVNQLLDLMSRQR-------RHIIPKC-STHNSQELLFC 129
CR + I P+ V ++N + + RQR I+ +C N + L+C
Sbjct: 65 SCRRETNILPKNFVINYAMLDVINSMNEAKERQRPAKTKKGEGILVQCFENQNHEAELYC 124
Query: 130 ETCDTVFCLQCTGGSNHSS 148
+C +C +C S+ S
Sbjct: 125 TSCKEAYCEKCYMKSHEKS 143
>gi|291222861|ref|XP_002731433.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 693
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E+ +E+FL C C Y K+LPC H+ C C+ ++ Q + CP+CR
Sbjct: 10 EEIDENFLVCTVCSERY----RNAKILPCLHSFCEQCIHKLV--QKSCGKNIPCPVCRRV 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCD----TVFCLQ 139
+P G + FL N+L+ L+ ++ + + E+ CE C T C+
Sbjct: 64 HDLPEGASSVQSNVFL-NELVVLLGKRDK---------KTNEVQKCEGCQRDPMTTHCID 113
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKA 175
C G S H +PFS + K MS + YKA
Sbjct: 114 CAVGLCDICI---STHKRLPFSKSHKLMS-LQTYKA 145
>gi|193203953|ref|NP_494232.2| Protein B0281.3 [Caenorhabditis elegans]
gi|351065646|emb|CCD61640.1| Protein B0281.3 [Caenorhabditis elegans]
Length = 329
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 41 DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
+ G+H+P+ L C HT+C C+ ++ + CP CRE +P + +L +F +
Sbjct: 16 EDGDHSPRNLKCCHTLCEGCIKKLL-----NYSRIVCPFCREPTEVPGNNIKSLHKNFSL 70
Query: 101 NQLLD--LMSRQRRHIIPKCSTH--NSQELL----FCETCDTVFCLQCTGGSNHS 147
Q++ L+ IIPKC H N E C + D + C C H
Sbjct: 71 IQVIKTTLVEEAEARIIPKCKAHPYNLAEFFCVNPDCSSNDKLMCRTCEDFGVHK 125
>gi|115686193|ref|XP_796095.2| PREDICTED: tripartite motif-containing protein 45-like
[Strongylocentrotus purpuratus]
Length = 618
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 32/150 (21%)
Query: 20 SINYEDFN------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA------- 66
S++Y+D +S LTCG C Y+ P+LLPC HT C+ CL + +
Sbjct: 4 SVDYKDNTIIQEAMDSRLTCGICRGRYN----DPRLLPCLHTYCMSCLQGLESHVLFYRD 59
Query: 67 -------------SQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQL--LDLMSRQR 111
+ + CP C ++ + +GG+ P F+ ++ LD ++
Sbjct: 60 DGSDTSSLSSMLSHLGNKASAIMCPACGTEVELSKGGLGVFPVDFMAQRILVLDSLNPNS 119
Query: 112 RHIIPKCSTHNSQELLFCETCDTVFCLQCT 141
++I T NS+ + C C C C
Sbjct: 120 SNLICDLCTDNSKAISRCVECMVNVCGFCV 149
>gi|326914184|ref|XP_003203407.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13-like isoform 1
[Meleagris gallopavo]
Length = 409
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R +CP CR++
Sbjct: 6 EEDLTCPICCSLFDD----PRVLPCSHNFCRKCLEGILDGNVRNVLWRPSPFKCPTCRKE 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK---CSTHNSQEL-LFCETCDTVFCLQ 139
P G+ +L ++ + +++ ++ + I PK C H+ Q L +FC T + C
Sbjct: 62 --TPVTGINSLQVNYSLKGIVEKYNKIK--ITPKMPVCKVHSGQPLNIFCRTDMQLICGV 117
Query: 140 CTGGSNHSS 148
C +H+
Sbjct: 118 CATRGDHTK 126
>gi|308486749|ref|XP_003105571.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
gi|308255537|gb|EFO99489.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
Length = 193
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTL-RCPICREQ 83
N ++CG CL YD E PK+L C HT+CL CL + S G L CP CRE+
Sbjct: 125 NRDAMSCGICLENYDNDEKLPKVLDCGHTICLVCLDSLEKS----NGHLVSCPFCREK 178
>gi|260788947|ref|XP_002589510.1| hypothetical protein BRAFLDRAFT_88379 [Branchiostoma floridae]
gi|229274688|gb|EEN45521.1| hypothetical protein BRAFLDRAFT_88379 [Branchiostoma floridae]
Length = 1338
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PK+LPC HT C CL ++A R+ ++CP CR I
Sbjct: 15 EQLLTCPVCLDRY----KRPKILPCQHTFCQDPCLQQLADPVRRK---VKCPECRAMHNI 67
Query: 87 PRGGVAALPPSFLVNQLLDL 106
P G++ P + + + LDL
Sbjct: 68 PPKGISGFPNNITILKFLDL 87
>gi|300797215|ref|NP_001180210.1| midline-1 isoform 6 [Homo sapiens]
Length = 228
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|260841653|ref|XP_002614025.1| hypothetical protein BRAFLDRAFT_67391 [Branchiostoma floridae]
gi|229299415|gb|EEN70034.1| hypothetical protein BRAFLDRAFT_67391 [Branchiostoma floridae]
Length = 1084
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L CG CL ++ PK L C HT C CL + ++ L CP CR +++P G
Sbjct: 416 LHCGICLEPFN----NPKALACLHTFCQECLVNLVGKRS----FLTCPTCRTSVSLPPKG 467
Query: 91 VAALPPSFLVNQL 103
V LP +F +++L
Sbjct: 468 VQGLPDNFWLSEL 480
>gi|213514884|ref|NP_001133371.1| Tripartite motif-containing protein 13 [Salmo salar]
gi|209152241|gb|ACI33103.1| Tripartite motif-containing protein 13 [Salmo salar]
Length = 384
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR---ETGTLRCPICREQI 84
E LTC C C+++ P++LPCSH+ C CL I R +CP CR++
Sbjct: 5 EEDLTCPICCCLFED----PRVLPCSHSFCKKCLEGILEGNNRGPIWRPPFKCPSCRKE- 59
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK---CSTHNSQEL-LFCETCDTVFCLQC 140
P+ G+ L ++ + +++ ++ R +IP+ C H+ Q L +FC T + C C
Sbjct: 60 -TPQNGINTLQINYSLRGIVEKYNKIR--LIPRMVLCKHHSGQPLNIFCATDLKLICGFC 116
Query: 141 TGGSNHS 147
+H
Sbjct: 117 ATTVDHK 123
>gi|431891812|gb|ELK02346.1| Tripartite motif-containing protein 55 [Pteropus alecto]
Length = 560
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 29/149 (19%)
Query: 18 TVSINYEDFN---------ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---- 64
+ S+NY+ F+ E L C CL M+ +LPC H +C C S I
Sbjct: 2 SASLNYKSFSKEQQTMDNLEKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQAS 58
Query: 65 -------AASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR-----QRR 112
+ G RCP CR ++ + R G+ L + LV ++D+ + +++
Sbjct: 59 NPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKK 118
Query: 113 HIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
P+C H + + ++C C+ C C
Sbjct: 119 SDQPRCEEHEEEHINIYCLNCEVPTCSLC 147
>gi|390368117|ref|XP_003731391.1| PREDICTED: uncharacterized protein LOC100889979 [Strongylocentrotus
purpuratus]
Length = 562
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + PK+L CSHT C CL + +R L CP CR + +P
Sbjct: 13 LECPVCLRFF----KDPKILTCSHTFCKGCLETL-LELSRNKDLLLCPTCRGETLVPGRD 67
Query: 91 VAALPPSFLVNQLL-DLMSRQRRHIIPKCSTH-NSQELLFCETCDTVFCLQCTGGSNHSS 148
V L + V L+ D+ ++ + KC H N E FC C C +C S H
Sbjct: 68 VGRLLSNITVRSLVEDVETQGPSNQEDKCKKHTNQDEDCFCLNCQKYVCCKC-AISEHVK 126
Query: 149 TSGDSEHTIIPFSIAIKRMSEILLYKAN 176
+ HTI+ K E L KAN
Sbjct: 127 NA----HTILEAGDHEKNNIEELASKAN 150
>gi|390334668|ref|XP_003723985.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 722
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-----TLRCPICREQIT 85
+ C CL D TP++L C H+ C CL + ++ ++ TL+C +C+E
Sbjct: 16 VECAICLNKLD----TPRILACLHSFCEKCLEKCVRNRKDDSSQSGNSTLKCALCKEYTA 71
Query: 86 IPRGGVAALPPSF----LVNQLLDLMSRQRR-----HIIPKCSTHNSQE--------LLF 128
+P GV L F LV LL+ +R+R+ H C +S E +
Sbjct: 72 LPDTGVRGLRLDFRATRLVETLLEQETRERKLASSAHRCEACGCTDSGETASTEKSPFTY 131
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C C V C +C+ S H+ HT+ S
Sbjct: 132 CRECCQVLCERCS--SAHAGLRMTQTHTVANIS 162
>gi|326914186|ref|XP_003203408.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13-like isoform 2
[Meleagris gallopavo]
Length = 416
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R +CP CR++
Sbjct: 13 EEDLTCPICCSLFDD----PRVLPCSHNFCRKCLEGILDGNVRNVLWRPSPFKCPTCRKE 68
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK---CSTHNSQEL-LFCETCDTVFCLQ 139
P G+ +L ++ + +++ ++ + I PK C H+ Q L +FC T + C
Sbjct: 69 --TPVTGINSLQVNYSLKGIVEKYNKIK--ITPKMPVCKVHSGQPLNIFCRTDMQLICGV 124
Query: 140 CTGGSNHSS 148
C +H+
Sbjct: 125 CATRGDHTK 133
>gi|426335042|ref|XP_004029043.1| PREDICTED: tripartite motif-containing protein 54 isoform 2
[Gorilla gorilla gorilla]
Length = 400
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
++ ++C +C+ C C H D E +P ++ ++ L EC N
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHK----DCEVAPLPTIYKRQKKQDLTLLPRLECSGTN 187
>gi|3462505|gb|AAC32999.1| midline 1 cerebellar isoform 2 [Homo sapiens]
Length = 228
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|78482627|ref|NP_115935.3| tripartite motif-containing protein 54 isoform 1 [Homo sapiens]
gi|332812770|ref|XP_003308972.1| PREDICTED: tripartite motif-containing protein 54 isoform 2 [Pan
troglodytes]
gi|119621012|gb|EAX00607.1| tripartite motif-containing 54, isoform CRA_b [Homo sapiens]
Length = 400
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
++ ++C +C+ C C H D E +P ++ ++ L EC N
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHK----DCEVAPLPTIYKRQKKQDLTLLPRLECSGTN 187
>gi|432927907|ref|XP_004081086.1| PREDICTED: tripartite motif-containing protein 55-like [Oryzias
latipes]
Length = 356
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-----TRET---GTLRCPI 79
E L C CL ++ +LPC H +C C + S TR G RCP
Sbjct: 5 EKQLICPICLELFT---KPVVILPCQHNLCRKCANDFFQSSNPYLSTRTASSGGRFRCPS 61
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQ---------RRHIIPKCSTHNSQEL-LFC 129
CR ++ + R GV L + LV ++D+ +Q R+ P C H +++ +FC
Sbjct: 62 CRHEVVLDRHGVYGLQRNLLVENIIDMFKQQSSSSTLAPERKEETPMCDVHEDEKINIFC 121
Query: 130 ETCDTVFCLQCTGGSNHSS 148
T C C H
Sbjct: 122 VTHGVPTCSMCKVFGAHKD 140
>gi|47224983|emb|CAF97398.1| unnamed protein product [Tetraodon nigroviridis]
Length = 308
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 19/192 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-------LRCPIC 80
E LTC C ++ P++LPCSHT C +CL + + L+CP C
Sbjct: 5 EEDLTCSVCYSLFSD----PRVLPCSHTFCKNCLDNLLKVSNDNSSLWRPLRPPLKCPNC 60
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQ 139
R + +P G+ ALP S + +++ P C H+ + L ++C + C
Sbjct: 61 RTLVELPLAGLEALPSSVSLRAIVEKYQVDGHPRPPCCQEHHREPLNMYCVQDRQLICGL 120
Query: 140 C-TGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHK 198
C T G + D + T I K+ LL K +E KVC E L +
Sbjct: 121 CLTVGQHRGHPIDDLQATF----IREKQTPSRLLAKLSE-TKWAKVC-ELGKQLEQEKAR 174
Query: 199 ADAYVRRRGAHT 210
+ +R H
Sbjct: 175 CEGLLREDQVHV 186
>gi|334328338|ref|XP_001369492.2| PREDICTED: e3 ubiquitin-protein ligase TRIM63-like [Monodelphis
domestica]
Length = 465
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ---------TRETGTLRCP 78
E L C CL M+ +LPC H +C C + + + + G RCP
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDVFQAANPYWSNRGGSISGGRFRCP 74
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFCET 131
CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C T
Sbjct: 75 SCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGNHPMCKEHEDEKINIYCLT 134
Query: 132 CDTVFCLQCTGGSNHSS 148
C+ C C H +
Sbjct: 135 CEVPTCSMCKVFGAHKA 151
>gi|13160389|emb|CAC32842.1| ring finger protein 30 [Homo sapiens]
Length = 384
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 2 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 58
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 59 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 116
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
++ ++C +C+ C C H D E +P ++ ++ L EC N
Sbjct: 117 KINIYCLSCEVPTCSLCKVFGAHK----DCEVAPLPTIYKRQKKQDLTLLPRLECSGTN 171
>gi|260826804|ref|XP_002608355.1| hypothetical protein BRAFLDRAFT_91314 [Branchiostoma floridae]
gi|229293706|gb|EEN64365.1| hypothetical protein BRAFLDRAFT_91314 [Branchiostoma floridae]
Length = 635
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++ ++ FLTC CL + PKLL C H+ C CL T++CP C+
Sbjct: 7 KEISDDFLTCQICLDTF----RKPKLLDCVHSFCEECLKEYVNPGDT---TVKCPTCQRD 59
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRR-----HIIPKCSTHNSQELLF--CETCDTVF 136
+ + GV+ L +F + L++ + +++ IP C + +E + C TC+
Sbjct: 60 TALKQNGVSGLKDNFFILNLVETIGARKKVQRSVDKIP-CDSCAGKETVVSRCLTCNDFL 118
Query: 137 CLQCTG 142
C C
Sbjct: 119 CESCVA 124
>gi|443725741|gb|ELU13192.1| hypothetical protein CAPTEDRAFT_94102, partial [Capitella teleta]
Length = 95
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR----ETGTLRCPICREQI 84
S +TC C ++ PK+LPC HT C CL + + + + CP CR+ I
Sbjct: 15 SLVTCDICTEVF----RQPKVLPCQHTFCFECLQKFCENCNKHRIYRITSFPCPSCRKLI 70
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSR 109
+P GG+ LP F V Q+ + + +
Sbjct: 71 HLPAGGIQQLPNDFRVAQICEFIEK 95
>gi|260791768|ref|XP_002590900.1| hypothetical protein BRAFLDRAFT_107250 [Branchiostoma floridae]
gi|229276098|gb|EEN46911.1| hypothetical protein BRAFLDRAFT_107250 [Branchiostoma floridae]
Length = 546
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 49 LLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMS 108
+LPC H C CL + R + +RCP+CRE+ + R GV + + L ++L
Sbjct: 54 MLPCQHNFCQACLQDMFQGPYR-SRRIRCPVCREEFWLSR-GVDGVARNRLAEKVLQTWQ 111
Query: 109 RQRRHIIPK---CSTHNSQEL-LFCETCDTVFCLQCT 141
++ PK C+ H + + LFC+T D C +C
Sbjct: 112 EEQAKPKPKTTMCADHPDERVNLFCQTDDRTICARCV 148
>gi|62988909|gb|AAY24296.1| unknown [Homo sapiens]
Length = 384
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 2 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 58
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 59 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 116
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
++ ++C +C+ C C H D E +P ++ ++ L EC N
Sbjct: 117 KINIYCLSCEVPTCSLCKVFGAHK----DCEVAPLPTIYKRQKKQDLTLLPRLECSGTN 171
>gi|402909479|ref|XP_003917445.1| PREDICTED: midline-1-like [Papio anubis]
Length = 221
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR +T S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|332818244|ref|XP_003310122.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan troglodytes]
Length = 402
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SITEITPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|327261165|ref|XP_003215402.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13-like [Anolis
carolinensis]
Length = 408
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR----ETGTLRCPICREQ 83
E LTC C ++D P+ LPCSH C CL I R +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRALPCSHNFCKKCLEGILEGNARSIIWRQSPFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHI-IPKCSTHNSQEL-LFCETCDTVFCLQCT 141
T+ GV L ++ + +++ ++ + +P C H+ Q L +FC+T + C C
Sbjct: 61 TTVT--GVNNLQVNYSLKGIVEKYNKIKVTTKMPVCKVHSGQPLNIFCQTDTQLICGICA 118
Query: 142 GGSNH 146
+H
Sbjct: 119 TRGDH 123
>gi|449484041|ref|XP_002198004.2| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Taeniopygia guttata]
Length = 409
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R +CP CR++
Sbjct: 6 EEDLTCPICCSLFDD----PRVLPCSHNFCRKCLEGILEGNVRNVLWRPSPFKCPTCRKE 61
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH-IIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
P G+ +L ++ + +++ ++ + +P C H+ Q L +FC T + C C
Sbjct: 62 --TPVTGINSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCA 119
Query: 142 GGSNHSS 148
+H+
Sbjct: 120 TRGDHTK 126
>gi|291237190|ref|XP_002738518.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 739
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
++FNE+ L C C Y ++LPC H+ C C+ ++AA + T+ CP CR
Sbjct: 10 DEFNENSLICAICSERY----RDARILPCLHSFCEQCIGKLAAKAGGK--TVLCPTCRRG 63
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRH---IIPKC-STHNSQELLFCETCDTVFCLQ 139
+ G+A++P + + +L L+ +R + KC S + +C C C+
Sbjct: 64 HDLT-DGLASIPKNLFLTELAGLIENERGGDSTKVVKCGSCLKAAPQTWCLDCAVGLCVD 122
Query: 140 CTGG 143
CT G
Sbjct: 123 CTQG 126
>gi|410899092|ref|XP_003963031.1| PREDICTED: RING finger protein 223-like [Takifugu rubripes]
Length = 231
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA------SQTRETGTLRCPICREQITI 86
C C +YD TPK+L C+HT CL CLSR+ A + + CP CR+ +
Sbjct: 31 CSICYNVYDNVFKTPKVLDCTHTFCLECLSRLMAVSPAGQDSDNPSNNISCPFCRQTTML 90
Query: 87 PRGGVAAL 94
P+ G AL
Sbjct: 91 PQEGPPAL 98
>gi|330843651|ref|XP_003293762.1| hypothetical protein DICPUDRAFT_99751 [Dictyostelium purpureum]
gi|325075871|gb|EGC29710.1| hypothetical protein DICPUDRAFT_99751 [Dictyostelium purpureum]
Length = 454
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 23 YEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
+ D +E F TC C ++D P +LPCSH C C+ + Q T + CP CR
Sbjct: 51 FIDLSEDF-TCSICYELFDK----PIILPCSHNFCKLCIENMITGQKNNT-SFSCPFCRG 104
Query: 83 QITIPRGGVAALPPSFLVN-QLLDLMSRQR--RHIIPK-CSTHNSQELL-FCETCDTVFC 137
++ + GV LP +N LL + + + PK C + +S+++ CETC C
Sbjct: 105 EVKLNEKGVDGLP----INCHLLTAVEKLKNANAFCPKFCDSCSSKKITKKCETCSIFLC 160
Query: 138 LQC 140
C
Sbjct: 161 KTC 163
>gi|397521162|ref|XP_003830670.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan paniscus]
Length = 402
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT------LRCPICR 81
E LTC C +++ P++LPCSHT C +CL I + L+CP CR
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
I G+ +LP +F + +++ ++ I C H Q L ++C + C C
Sbjct: 61 SITEITPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 -TGGSNHSSTSGD 152
T G +H D
Sbjct: 121 LTIGQHHGHPIDD 133
>gi|156371739|ref|XP_001628919.1| predicted protein [Nematostella vectensis]
gi|156215908|gb|EDO36856.1| predicted protein [Nematostella vectensis]
Length = 511
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 20/155 (12%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C + G PKLLPC H+ CL CL + T CP C + + +
Sbjct: 18 LNCSLCHRLIRG----PKLLPCLHSFCLACLEDLV---TENDVGFNCPQCHTEAKVSKAA 70
Query: 91 VAALPPSFLVNQLLD--LMSRQRRHIIP--KC---STHNSQELLFCETCDTVFCLQCTGG 143
+ LP +F ++ +LD LM+ +P C +T NS+ C C C+ C
Sbjct: 71 LRGLPTNFFLDNMLDIALMNSSDSKPVPCTNCDLNATANSR----CLDCGEFLCVDCYNV 126
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC 178
H EH I+ S + +E +L + C
Sbjct: 127 --HKRIRQTKEHRIMTISELLASNTEEILSRVAYC 159
>gi|449268473|gb|EMC79337.1| RING finger protein 183, partial [Columba livia]
Length = 183
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRETGTLRCPICREQITI 86
S + C C YD TPKLL CSH CL C++R++ + L CP CR+ +I
Sbjct: 6 SPVECSICFNTYDNTFKTPKLLQCSHVFCLECVARLSTGLPPNQPEDQLPCPFCRQLTSI 65
Query: 87 PRGGVAAL 94
P G AL
Sbjct: 66 PMEGAPAL 73
>gi|405957001|gb|EKC23240.1| Tripartite motif-containing protein 13 [Crassostrea gigas]
Length = 659
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+ +L C C+ + P LPCSH C CL + + + CP CR+ + +
Sbjct: 95 DQYLRCPVCMDFF----ADPHRLPCSHCFCKRCLEGV----RQHCLSFNCPECRQLVVLD 146
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
GV L + ++D + Q++ C H FCETC + C +C HS
Sbjct: 147 YRGVDGLEKDRRLAAMVDEFAHQQQQS-RVCKEHKRTVEGFCETCAVLMCGRCFFSDQHS 205
Query: 148 S-TSGDSEHTIIPFSIAIKRMSEI 170
T GD + +A K+ EI
Sbjct: 206 GHTMGDVD------IVAKKKRDEI 223
>gi|260808476|ref|XP_002599033.1| hypothetical protein BRAFLDRAFT_104271 [Branchiostoma floridae]
gi|229284309|gb|EEN55045.1| hypothetical protein BRAFLDRAFT_104271 [Branchiostoma floridae]
Length = 405
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
++ FL C CL Y PK+L C HT C CL ++ Q + L CP CR +
Sbjct: 13 ISDDFLECKVCLEPY----RRPKVLSCLHTFCQECLEQLHKRQG-DAQHLECPTCRTKTE 67
Query: 86 IP-RGGVAALPPSFLVNQLLDLMS 108
+P + GV AL +F V L D +
Sbjct: 68 LPGKSGVTALKDNFFVESLADAVK 91
>gi|157134133|ref|XP_001663162.1| tripartite motif protein trim2,3 [Aedes aegypti]
gi|108881414|gb|EAT45639.1| AAEL003104-PA [Aedes aegypti]
Length = 1293
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 21/127 (16%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E LTC CL Y PKLLPC H+ C+ C+ + R+ ++CP CR + I
Sbjct: 5 EQLLTCCVCLDRY----RNPKLLPCQHSFCMEPCMDGLIDYVKRQ---VKCPECRAEHRI 57
Query: 87 PRGGVAALPPSFLVNQLLDLM--------SRQRRHIIPKCSTHNSQELLFCET---CDTV 135
P GV P + + + L+L I+ +C+ E +C + CD
Sbjct: 58 PYQGVQGFPTNVTLQRFLELHIEITGELPDPTSGQIMERCNV--CSEKAYCASCVHCDKK 115
Query: 136 FCLQCTG 142
C C G
Sbjct: 116 ICPDCKG 122
>gi|291240973|ref|XP_002740390.1| PREDICTED: tripartite motif protein-like [Saccoglossus kowalevskii]
Length = 830
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
N+ L C C +YD + PK LPC HT C+ CL+ +CP C+++ TI
Sbjct: 15 NKVPLRCSLCKHVYDVTDRLPKYLPCLHTFCVICLAGHVGR------IFQCPGCQQKSTI 68
Query: 87 PRGGVAALPPSFLV---NQLLDLMSRQRRHIIPKCST----HNSQELLFCETCDTVFCLQ 139
+ + +P +F NQL ++ + +P C + + + ++ C C+ C
Sbjct: 69 LK-RIDGIPTNFAFLNYNQLFCHQNQIKHSNLPTCQSCCRKNQTLKVSHCSDCEAYLCRS 127
Query: 140 CTGGSNHSSTSGDSE 154
C H G E
Sbjct: 128 CHDNHFHMDFFGTHE 142
>gi|292617847|ref|XP_002663478.1| PREDICTED: midline-1 [Danio rerio]
Length = 667
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 36/148 (24%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-------TRETGTLRC 77
D ES LTC CL +++ P LLPC+H++C HC RI S ++ +C
Sbjct: 2 DTLESELTCPICLELFED----PLLLPCAHSLCFHCAHRILTSHCAAFDESSKPPSAFQC 57
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----------RRHIIPK--------- 117
P CR IT+ + G+ L + + +++ + R+ I P
Sbjct: 58 PTCRYVITLDQQGLDGLKRNVTLQNIIERFQKASLSGPNSPTETRKQISPSAMSSACEAV 117
Query: 118 ----CSTHNSQELL-FCETCDTVFCLQC 140
C QE + C TC+ +C +C
Sbjct: 118 QCQFCEQDPPQEAVKTCVTCEVSYCQEC 145
>gi|402890366|ref|XP_003908459.1| PREDICTED: tripartite motif-containing protein 54 isoform 2 [Papio
anubis]
Length = 402
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
++ ++C +C+ C C H D E +P ++ ++ L EC N
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHK----DCEVAPLPTIYKRQKRQDLTLLPRLECSGTN 187
>gi|198416991|ref|XP_002121541.1| PREDICTED: similar to GG21942, partial [Ciona intestinalis]
Length = 426
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLH-CLSRIAASQTRETGTLRCPICREQITI 86
E+ +TC CL D H PK+LPC HT CL CL + ++ +RCP CR +
Sbjct: 6 ETLVTCAVCL---DRFVH-PKILPCQHTFCLKPCLQNLVIDKS-----IRCPHCRTIHKL 56
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRR--HIIPKCSTHNSQELLFCETCDTVFCLQC 140
P+ G++ P + + +LD + I +C N LL C+ C+ C C
Sbjct: 57 PKRGLSDFPNNLTIVSILDFSPKPNSDIKICQECLKSNCATLL-CQHCEKKLCETC 111
>gi|351711594|gb|EHB14513.1| Tripartite motif-containing protein 54, partial [Heterocephalus
glaber]
Length = 364
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTAVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSS 148
++ ++C TC+ C C H
Sbjct: 133 KINIYCLTCEVPTCSLCKVFGAHKD 157
>gi|291387033|ref|XP_002709850.1| PREDICTED: ring finger protein 30 [Oryctolagus cuniculus]
Length = 394
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----------AASQTRETG 73
D E L C CL M+ +LPC H +C C + + +S G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSSTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSS 148
++ ++C +C+ C C H
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHKD 157
>gi|291235472|ref|XP_002737668.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 701
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 31/144 (21%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E +++FL C C Y K+LPC H+ C C+ ++ Q + CP+CR
Sbjct: 10 EKIDDNFLVCTVCSERY----RNAKILPCLHSFCEQCIDKLV--QKSGGKNIPCPVCRRI 63
Query: 84 ITIPRGGVAALPPSFL-------------VNQLLDLMSRQRRHIIPK-----------CS 119
+P G + FL N+ +LMSRQ CS
Sbjct: 64 HDLPEGAGSVQSNVFLNELVVLLGKRDKKTNESHNLMSRQTYQAAKSADIATVQPPVYCS 123
Query: 120 THNSQEL-LFCETCDTVFCLQCTG 142
H +L L C+TCD C+ C
Sbjct: 124 HHPGNQLELHCDTCDIPICVACAA 147
>gi|355751198|gb|EHH55453.1| hypothetical protein EGM_04665 [Macaca fascicularis]
Length = 400
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
++ ++C +C+ C C H D E +P ++ ++ L EC N
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHK----DCEVAPLPTIYKRQKRQDLTLLPRLECSGTN 187
>gi|291395446|ref|XP_002714111.1| PREDICTED: ADP-ribosylation factor domain protein 1 [Oryctolagus
cuniculus]
Length = 574
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 28/152 (18%)
Query: 29 SFLTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 27 KVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTELG 82
Query: 88 RGGVAALPPSFLVNQLLDLMSR-QRRHI----------------IPKCSTHNSQEL-LFC 129
GV L +F LL+L+ R Q HI I +C + ++C
Sbjct: 83 DSGVWGLKKNF---ALLELLERLQNGHIGQYGAAEEAIGISGESIIRCDEDEAHVASVYC 139
Query: 130 ETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C T C +C+ G++ ST ++H +P +
Sbjct: 140 TVCATHLCSECSQGTH--STKTLAKHRRVPLA 169
>gi|291221732|ref|XP_002730875.1| PREDICTED: tripartite motif-containing 3-like [Saccoglossus
kowalevskii]
Length = 617
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL+C CL + PK+LPC HT C CL A + G L+C CR Q
Sbjct: 11 EIGEDFLSCSICLEFF----KNPKVLPCLHTFCEQCLVTFKA---KSEGDLKCATCRIQC 63
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRR 112
+ L +F + LLD R R+
Sbjct: 64 DTS---IQELKSNFFLTSLLDTFQRLRQ 88
>gi|405963108|gb|EKC28710.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 368
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSR-IAASQTRETGTLRCPI 79
++Y+D +TC CL Y P+ LPC HT C CL+ I+ + +E CP
Sbjct: 1 MSYQDL----ITCPICLENYTK----PRYLPCLHTYCEECLTDYISTAYNKEENGFSCPT 52
Query: 80 CR--------EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHI-IPKCSTHNSQE--LLF 128
CR E I+ P+ A P + ++ LLD + + + CS +E +
Sbjct: 53 CRMPNKVEVSENIS-PKMAAAGFPINHMIMTLLDQRDIENKDVSCNPCSKRGRKEPGKFW 111
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C +C C C G H+S ++H I P
Sbjct: 112 CYSCSAALCEAC--GEFHTSLPILADHRIAPLE 142
>gi|395840771|ref|XP_003793225.1| PREDICTED: RING finger protein 223 [Otolemur garnettii]
Length = 239
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR---ETGTLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q + + CP CR+
Sbjct: 38 SPLECSICFSGYDNIFRTPKELTCTHVFCLECLARLAAAQPAGHPGSEAVPCPFCRKPTA 97
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 98 LPPAGAPAL 106
>gi|332867118|ref|XP_003318676.1| PREDICTED: tripartite motif-containing protein 4 isoform 1 [Pan
troglodytes]
gi|410227820|gb|JAA11129.1| tripartite motif containing 4 [Pan troglodytes]
gi|410255308|gb|JAA15621.1| tripartite motif containing 4 [Pan troglodytes]
gi|410304498|gb|JAA30849.1| tripartite motif containing 4 [Pan troglodytes]
gi|410358717|gb|JAA44626.1| tripartite motif containing 4 [Pan troglodytes]
Length = 474
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 61/162 (37%), Gaps = 21/162 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E LTC CL + P + C H C CL R S G CP CR
Sbjct: 4 EDIQEE-LTCPICLDYF----QDPVSIECGHNFCRGCLHR---SWAPGGGPFPCPECRHP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
AAL P++ + +L + R+R +P C H LFCE CL C
Sbjct: 56 -----SAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK 183
H + H + P A + E LL V+K K
Sbjct: 111 ESQEHQT------HAMAPIDEAFESYREKLLKSQRNLVAKMK 146
>gi|397489504|ref|XP_003815766.1| PREDICTED: tripartite motif-containing protein 4 isoform 1 [Pan
paniscus]
Length = 474
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 61/162 (37%), Gaps = 21/162 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E LTC CL + P + C H C CL R S G CP CR
Sbjct: 4 EDIQEE-LTCPICLDYF----QDPVSIECGHNFCRGCLHR---SWAPGGGPFPCPECRHP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
AAL P++ + +L + R+R +P C H LFCE CL C
Sbjct: 56 -----SAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK 183
H + H + P A + E LL V+K K
Sbjct: 111 ESQEHQT------HAMAPIDEAFESYREKLLKSQRNLVAKMK 146
>gi|321460277|gb|EFX71321.1| hypothetical protein DAPPUDRAFT_308939 [Daphnia pulex]
Length = 751
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 74/195 (37%), Gaps = 29/195 (14%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
N+S C C Y+ PK L C HTVCL C+ + S +RCP+CR TI
Sbjct: 6 NKSLFECCVCYSFYNRDFRKPKYLMCHHTVCLDCICKTLESSDSSFLQVRCPLCRVLTTI 65
Query: 87 PRGGVAALPPSFLVNQ-LLDLM------------SRQRRH---IIPKCSTHNSQELLFCE 130
+ + NQ +LD M SR H +I + S L +C
Sbjct: 66 QSKDINQ---ALRTNQDILDFMDIWIYKLSNNVDSRLSDHCQVVINQNCEETSSGLKWCR 122
Query: 131 TCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKS 190
C + C D++H + S I + +E L + + +S + ++
Sbjct: 123 DCQDLAFDAC----------HDNKHCTVTVSPTILKFAEEALAQGRQSLSNWEKAISKRD 172
Query: 191 NLRPSAHKADAYVRR 205
+LR + V R
Sbjct: 173 DLRAIVTSIQSSVNR 187
>gi|156393704|ref|XP_001636467.1| predicted protein [Nematostella vectensis]
gi|156223571|gb|EDO44404.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 19 VSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCP 78
+S++ + NE L C CL D HT K+LPC HT C CL I A++ LRCP
Sbjct: 1 MSLDSVELNE-LLECSVCLERLD---HTSKVLPCQHTFCRRCLKEIQAAKKE----LRCP 52
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
CR + V LP + L+ ++L+ ++R+R
Sbjct: 53 ECR---ILVDQEVDELPSNILLVRILEGLNRKR 82
>gi|341878189|gb|EGT34124.1| hypothetical protein CAEBREN_00609 [Caenorhabditis brenneri]
Length = 316
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLR-------CPICREQIT 85
C C YD H PK+L C+HT+C C++ + A R G + CP+CR
Sbjct: 21 CRICTVAYDDNRHLPKILQCAHTICNACINVLEAEGRRRAGNMDMTQVYIVCPVCRMLTQ 80
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRH 113
PR + ++ + ++D+M + H
Sbjct: 81 APRNSIRT---NYQLIDVVDVMRGEANH 105
>gi|426357154|ref|XP_004045912.1| PREDICTED: tripartite motif-containing protein 4 isoform 1 [Gorilla
gorilla gorilla]
Length = 474
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 61/162 (37%), Gaps = 21/162 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E LTC CL + P + C H C CL R S G CP CR
Sbjct: 4 EDIQEE-LTCPICLDYF----QDPVSIECGHNFCRGCLHR---SWAPGGGPFPCPECRHP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
AAL P++ + +L + R+R +P C H LFCE CL C
Sbjct: 56 -----SAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK 183
H + H + P A + E LL V+K K
Sbjct: 111 ESQEHQT------HAMAPIDEAFESYREKLLKSQRNLVAKMK 146
>gi|58891532|gb|AAW83119.1| plenty of SH3s [Xenopus laevis]
Length = 826
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL +G + + K+LPC HT C CL I +S+ LRCP CR T+
Sbjct: 9 LLECPVCL---EGLDASAKVLPCQHTFCKRCLLGIVSSRKE----LRCPECR---TLVEC 58
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSST 149
GV LP + L+ +LLD + ++ R S NS L + T GG N +
Sbjct: 59 GVDELPSNILLVRLLDGIRQRPRKAGDGGSAGNSTNALRAQGSVTT-----NGGLNDAQN 113
Query: 150 SGDSEHTIIPFSIAIKRMSEILLYKA 175
+ + I S ++ + ++ KA
Sbjct: 114 TQSGQQRIQARSPPVRGVPQLPCAKA 139
>gi|440906127|gb|ELR56432.1| Tripartite motif-containing protein 54, partial [Bos grunniens
mutus]
Length = 418
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 26/137 (18%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRSSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDE 132
Query: 125 EL-LFCETCDTVFCLQC 140
++ ++C +C+ C C
Sbjct: 133 KINIYCLSCEVPTCSLC 149
>gi|405962355|gb|EKC28045.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 504
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT-LRCPICREQIT 85
N++ C CL + PK+LPC HT C C+ + + E+ RCP+CRE I
Sbjct: 9 NDNGRQCSICLDSF----RCPKILPCKHTFCKRCV--LGYQREYESDDEFRCPLCRELIA 62
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQE--LLFCETCDTVFCLQCT 141
+P+ GV ++ V R I P+ C N +E + C CD C C
Sbjct: 63 LPQNGVEGFCDNYFV-----------RDIFPEKVCDVCNVEEDKVDDCGYCDKYLCSFCA 111
>gi|390361659|ref|XP_003729977.1| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 333
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL + +P LL C HT C CL T + CP+CR + +
Sbjct: 12 LACPLCLEAF----KSPTLLQCGHTFCKDCLETYDEKHTF-WDYMDCPLCRNRTKLGPYR 66
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPK-CSTHNSQ-ELLFCETCDTVFCLQCTGGSNHS 147
+A LPP+F + L D + + ++P C H ++ + +FCE C+ C+ C S+ S
Sbjct: 67 IAGLPPNFSLRGLQDDLHDE--CLLPNSCVLHKTECKNIFCEVCEIFICITCFIESHQS 123
>gi|345806149|ref|XP_848385.2| PREDICTED: RING finger protein 224 [Canis lupus familiaris]
Length = 154
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HT C C+ ++ A E + CP CR+ PRGGVA
Sbjct: 23 CIICYSAYDLTGHLPRRLYCGHTFCQACVRQLDAP-AHEQRWIPCPQCRQSTPTPRGGVA 81
Query: 93 ALP---PSFLVNQLLDLMSRQRRHIIPKCSTHNSQE 125
L +FL + +SR+ + PK ST +Q+
Sbjct: 82 MLDLDLAAFLAVKAEWELSREEPRVPPKGSTAITQQ 117
>gi|291223764|ref|XP_002731878.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 807
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 19/136 (13%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ E FL+C C + P+ LPC HT C CL A + G LRC CR Q
Sbjct: 14 EVREDFLSCSICFEFFK----KPRFLPCLHTFCEKCLVDYKA---QSEGVLRCATCRLQC 66
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCL-QCTGG 143
P + L +F + L+D + K S + C+ C+ + +C
Sbjct: 67 DTP---IQGLKSNFFIASLID--------SVQKLKQLKSHHPIICDMCEKKPAIHRCVDC 115
Query: 144 SNHSSTSGDSEHTIIP 159
S TS H +P
Sbjct: 116 SQFCCTSCVKIHERVP 131
>gi|62988310|ref|NP_001017951.1| tripartite motif-containing protein 54 [Bos taurus]
gi|75060473|sp|Q58D15.1|TRI54_BOVIN RecName: Full=Tripartite motif-containing protein 54
gi|61554900|gb|AAX46629.1| ring finger protein 30 isoform 2 [Bos taurus]
gi|88954107|gb|AAI14172.1| Tripartite motif-containing 54 [Bos taurus]
gi|296482300|tpg|DAA24415.1| TPA: tripartite motif-containing protein 54 [Bos taurus]
Length = 366
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRSSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSS 148
++ ++C +C+ C C H
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHKD 157
>gi|113679781|ref|NP_001038257.1| E3 ubiquitin-protein ligase SH3RF1 isoform 2 [Danio rerio]
Length = 857
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+
Sbjct: 22 LLECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVES 71
Query: 90 GVAALPPSFLVNQLLD-LMSRQRR 112
GV LP + L+ +LLD + R RR
Sbjct: 72 GVDELPSNILLVRLLDGIKQRPRR 95
>gi|338722208|ref|XP_003364505.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 183-like [Equus
caballus]
Length = 249
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR-ETG--TLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+AA+Q + G + CP CR+
Sbjct: 45 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPMGQPGGEAVPCPFCRQPTA 104
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 105 VPAAGAPAL 113
>gi|345327018|ref|XP_003431117.1| PREDICTED: midline-1 isoform 2 [Ornithorhynchus anatinus]
Length = 629
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNECVDSITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR + S E + C+
Sbjct: 61 YVITLNQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERASDGGSMTSSEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|55963355|emb|CAI12052.1| novel protein similar to vertebrate SH3 multiple domains 2 (SH3MD2)
[Danio rerio]
Length = 843
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+
Sbjct: 22 LLECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVES 71
Query: 90 GVAALPPSFLVNQLLD-LMSRQRR 112
GV LP + L+ +LLD + R RR
Sbjct: 72 GVDELPSNILLVRLLDGIKQRPRR 95
>gi|15011941|ref|NP_149082.1| tripartite motif-containing protein 4 isoform beta [Homo sapiens]
gi|12407379|gb|AAG53478.1|AF220024_1 tripartite motif protein TRIM4 isoform beta [Homo sapiens]
gi|41471314|gb|AAS07398.1| unknown [Homo sapiens]
gi|51094613|gb|EAL23865.1| tripartite motif-containing 4 [Homo sapiens]
gi|119597031|gb|EAW76625.1| tripartite motif-containing 4, isoform CRA_a [Homo sapiens]
Length = 474
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 61/162 (37%), Gaps = 21/162 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E LTC CL + P + C H C CL R A G CP CR
Sbjct: 4 EDIQEE-LTCPICLDYF----QDPVSIECGHNFCRGCLHRNWAPGG---GPFPCPECRHP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
AAL P++ + +L + R+R +P C H LFCE CL C
Sbjct: 56 -----SAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK 183
H + H + P A + E LL V+K K
Sbjct: 111 ESQEHQT------HAMAPIDEAFESYREKLLKSQRNLVAKMK 146
>gi|428185118|gb|EKX53971.1| hypothetical protein GUITHDRAFT_132400 [Guillardia theta CCMP2712]
Length = 498
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 18/150 (12%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPC--SHTVCLHCLSRIAASQTRETGTLRCPICR 81
EDF E LTC CL ++ P+ LPC SH VCL C + +QT T T+ CP+CR
Sbjct: 4 EDF-EDELTCPVCLMLFTD----PRTLPCGNSHNVCLECARGLWRNQTVPTLTINCPVCR 58
Query: 82 EQITIPRGGVAALPPSF-LVNQLLDLMSRQRRHIIPKCSTHNSQELLFCE---------T 131
++ GV LP + L N + L + Q+ K S + CE T
Sbjct: 59 ATCSLA-NGVERLPLNLALKNMVEKLEAAQKGKTAKKTSIRKKFKCDVCEKKPAVMECVT 117
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
C +C C + + H + P
Sbjct: 118 CVVKYCEACLETCHPKERAVFKAHVVTPME 147
>gi|14279435|gb|AAK58598.1|AF269102_1 midline-1 [Gallus gallus]
Length = 667
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A+++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR ++ +S E + C+
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|41055281|ref|NP_957389.1| uncharacterized protein LOC394070 [Danio rerio]
gi|29436440|gb|AAH49414.1| Zgc:56376 [Danio rerio]
Length = 348
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT---RETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLDMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRH------------IIPK------CSTHNSQEL 126
+ R GV L + LV ++D+ +Q+ I PK C H +++
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQEGGGGGGGSTTESPIKPKSSKELMCQEHEDEKI 136
Query: 127 -LFCETCDTVFCLQCTGGSNHSS 148
++C T T C C H
Sbjct: 137 NIYCVTHQTPTCSMCKVFGQHKD 159
>gi|431918500|gb|ELK17720.1| Midline-1 [Pteropus alecto]
Length = 331
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A +++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR + S E + C+
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANAMTSAEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|149728060|ref|XP_001500979.1| PREDICTED: tripartite motif-containing protein 54 [Equus caballus]
Length = 431
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSS 148
++ ++C +C+ C C H
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHKD 157
>gi|45383848|ref|NP_989460.1| midline 1 (Opitz/BBB syndrome) [Gallus gallus]
gi|20385604|gb|AAM21353.1|AF374463_1 midline 1 [Gallus gallus]
Length = 667
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A+++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR ++ +S E + C+
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|149638254|ref|XP_001516619.1| PREDICTED: midline-1 isoform 1 [Ornithorhynchus anatinus]
Length = 667
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ------TRETGTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNECVDSITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLM-----------SRQRRHIIPKCSTHNSQELLFCE 130
IT+ + G+ L + + ++D S RR + S E + C+
Sbjct: 61 YVITLNQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERASDGGSMTSSEKVLCQ 120
Query: 131 TCD 133
CD
Sbjct: 121 FCD 123
>gi|403297845|ref|XP_003939759.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 223 [Saimiri
boliviensis boliviensis]
Length = 411
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR---ETGTLRCPICREQIT 85
S L C C YD TPK L C+H CL CL+R+ A+Q + + CP CR+
Sbjct: 209 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLVAAQPEGSPGSEAVPCPFCRQPTA 268
Query: 86 IPRGGVAAL 94
+P G AL
Sbjct: 269 VPPAGAPAL 277
>gi|260811376|ref|XP_002600398.1| hypothetical protein BRAFLDRAFT_237354 [Branchiostoma floridae]
gi|229285685|gb|EEN56410.1| hypothetical protein BRAFLDRAFT_237354 [Branchiostoma floridae]
Length = 61
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ F+E FLTC C+ + PK+LPC HT C CL A Q L CP CR Q
Sbjct: 3 DGFDEEFLTCPVCMLHF----RDPKILPCLHTFCTECLKEWATKQQ----PLECPTCRAQ 54
Query: 84 ITIPRGG 90
++P G
Sbjct: 55 FSLPDQG 61
>gi|148356238|ref|NP_001038952.2| E3 ubiquitin-protein ligase SH3RF1 isoform 1 [Danio rerio]
gi|146327562|gb|AAI41795.1| LOC555925 protein [Danio rerio]
gi|190339698|gb|AAI63246.1| Si:dkey-15j16.4 [Danio rerio]
Length = 880
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 30 FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+
Sbjct: 22 LLECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVES 71
Query: 90 GVAALPPSFLVNQLLD-LMSRQRR 112
GV LP + L+ +LLD + R RR
Sbjct: 72 GVDELPSNILLVRLLDGIKQRPRR 95
>gi|440804160|gb|ELR25038.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 690
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 62/168 (36%), Gaps = 50/168 (29%)
Query: 18 TVSINYEDFNESFLTCGTCLCMYDGGE--HTPKLLPCSHTVCLHCLSRIAASQT------ 69
T S ED + TC CL + E H P+LL C H+ C CL+R+ + T
Sbjct: 8 TASAAEED-KDDVGTCSVCLVAFSASEADHVPRLLKCGHSFCTSCLTRLLDATTPSTNSN 66
Query: 70 ------------RETGTLRCPICR---------EQITIPRGGVAALPPSFLVNQLLDLMS 108
T LRCP CR + P GV LP +F L+DL+S
Sbjct: 67 SNSNSNSEAELEEATRPLRCPKCRTVTCVRLVDGEAAAPAAGVKGLPRNF---DLIDLLS 123
Query: 109 ----------RQRRHIIPKCSTHNSQELLFCETCDTV----FCLQCTG 142
RQ R P T + L C C FC QC G
Sbjct: 124 SSSSSSSSAMRQPR---PTVETSAAAAALKCANCSQAAAEKFCEQCGG 168
>gi|405965709|gb|EKC31068.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 1088
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT---LRCPICREQITIPRG 89
C CL + P+LLPCSH+ C HCL S E CP+CRE I P
Sbjct: 16 CSICLEKF----KFPRLLPCSHSFCQHCLCAYIVSTCEEKDVPLGFPCPVCREFIPSPGN 71
Query: 90 --GVAALPPSFLVNQLLDLMSRQRRHI---IPKCSTHNSQE--LLFCETCDTVFCLQCT 141
F +N +L L+ + R I P C N +E + FC TC C C+
Sbjct: 72 PEETIKWAEKFPINDVLVLLMNESRDIKLCWP-CKRGNEEEEAIEFCLTCKEPLCKMCS 129
>gi|78482626|ref|NP_912730.2| tripartite motif-containing protein 54 isoform 2 [Homo sapiens]
gi|114576605|ref|XP_001155913.1| PREDICTED: tripartite motif-containing protein 54 isoform 1 [Pan
troglodytes]
gi|397513702|ref|XP_003827150.1| PREDICTED: tripartite motif-containing protein 54 [Pan paniscus]
gi|209572715|sp|Q9BYV2.3|TRI54_HUMAN RecName: Full=Tripartite motif-containing protein 54; AltName:
Full=Muscle-specific RING finger protein; Short=MuRF;
AltName: Full=Muscle-specific RING finger protein 3;
Short=MuRF-3; Short=MuRF3; AltName: Full=RING finger
protein 30
gi|119621011|gb|EAX00606.1| tripartite motif-containing 54, isoform CRA_a [Homo sapiens]
gi|146327777|gb|AAI41808.1| Tripartite motif-containing 54 [Homo sapiens]
Length = 358
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSS 148
++ ++C +C+ C C H
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHKD 157
>gi|426335040|ref|XP_004029042.1| PREDICTED: tripartite motif-containing protein 54 isoform 1
[Gorilla gorilla gorilla]
Length = 358
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRET------G 73
D E L C CL M+ +LPC H +C C + + + Q+R + G
Sbjct: 18 DNLEKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGG 74
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQ 124
RCP CR ++ + R GV L + LV ++D L S+ +H++ C H +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEE 132
Query: 125 EL-LFCETCDTVFCLQCTGGSNHSS 148
++ ++C +C+ C C H
Sbjct: 133 KINIYCLSCEVPTCSLCKVFGAHKD 157
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.132 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,099,197,759
Number of Sequences: 23463169
Number of extensions: 159085879
Number of successful extensions: 372966
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 4653
Number of HSP's that attempted gapping in prelim test: 366593
Number of HSP's gapped (non-prelim): 6816
length of query: 267
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 127
effective length of database: 9,074,351,707
effective search space: 1152442666789
effective search space used: 1152442666789
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)