Your job contains 1 sequence.
>psy11858
MTLSMSSTLSTNSTLVETVSINYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC
LSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCST
HNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVS
KNKVCPERKSNLRPSAHKADAYVRRRGAHTQTPPLFSHGLSPLSLPDSSHALLITRRAYV
RRRGAHTQTPPLFSHGLSPLSLPDSSL
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11858
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00003599 - symbol:nhl-3 species:6239 "Caenorhabd... 459 3.8e-43 1
ZFIN|ZDB-GENE-080522-4 - symbol:trim3a "tripartite motif-... 170 8.5e-16 2
UNIPROTKB|C9JVI3 - symbol:TRIM2 "Tripartite motif-contain... 159 2.2e-15 2
UNIPROTKB|E9PMK8 - symbol:TRIM3 "Tripartite motif-contain... 183 3.0e-14 1
UNIPROTKB|J9NRL4 - symbol:TRIM2 "Uncharacterized protein"... 176 1.6e-13 1
MGI|MGI:2685298 - symbol:Trim56 "tripartite motif-contain... 169 3.3e-13 2
UNIPROTKB|F5GX85 - symbol:TRIM3 "Tripartite motif-contain... 183 3.7e-13 1
UNIPROTKB|E9PKS6 - symbol:TRIM3 "Tripartite motif-contain... 183 4.4e-13 1
UNIPROTKB|A7MB36 - symbol:TRIM3 "Uncharacterized protein"... 183 4.4e-13 1
UNIPROTKB|E2QVW6 - symbol:TRIM3 "Uncharacterized protein"... 183 4.4e-13 1
UNIPROTKB|O75382 - symbol:TRIM3 "Tripartite motif-contain... 183 4.4e-13 1
UNIPROTKB|C9JI91 - symbol:TRIM56 "E3 ubiquitin-protein li... 161 6.8e-13 2
UNIPROTKB|D4A8U3 - symbol:Trim3 "Tripartite motif-contain... 181 6.9e-13 1
MGI|MGI:1860040 - symbol:Trim3 "tripartite motif-containi... 181 7.3e-13 1
RGD|70074 - symbol:Trim3 "tripartite motif-containing 3" ... 181 7.3e-13 1
UNIPROTKB|O70277 - symbol:Trim3 "Tripartite motif-contain... 181 7.3e-13 1
ZFIN|ZDB-GENE-070112-1132 - symbol:trim3b "tripartite mot... 178 1.6e-12 1
UNIPROTKB|Q9C040 - symbol:TRIM2 "Tripartite motif-contain... 176 2.5e-12 1
UNIPROTKB|D2GXS7 - symbol:TRIM2 "Tripartite motif-contain... 176 2.5e-12 1
UNIPROTKB|F7H9X2 - symbol:TRIM2 "Tripartite motif-contain... 176 2.5e-12 1
UNIPROTKB|F1NEW3 - symbol:TRIM2 "Uncharacterized protein"... 176 2.6e-12 1
UNIPROTKB|D3DP09 - symbol:TRIM2 "Tripartite motif-contain... 176 2.6e-12 1
UNIPROTKB|I3L8U3 - symbol:TRIM2 "Uncharacterized protein"... 175 3.3e-12 1
UNIPROTKB|A4IF63 - symbol:TRIM2 "Tripartite motif-contain... 174 4.1e-12 1
MGI|MGI:1933163 - symbol:Trim2 "tripartite motif-containi... 174 4.1e-12 1
RGD|1310981 - symbol:Trim2 "tripartite motif-containing 2... 173 5.2e-12 1
UNIPROTKB|E9PMW5 - symbol:TRIM3 "Tripartite motif-contain... 158 1.3e-11 1
UNIPROTKB|Q9BRZ2 - symbol:TRIM56 "E3 ubiquitin-protein li... 161 2.4e-11 2
UNIPROTKB|C9IY67 - symbol:TRIM59 "Tripartite motif-contai... 151 7.4e-11 1
UNIPROTKB|E1BD59 - symbol:TRIM56 "E3 ubiquitin-protein li... 168 1.4e-10 1
UNIPROTKB|G5E5F1 - symbol:TRIM56 "E3 ubiquitin-protein li... 168 1.4e-10 1
UNIPROTKB|C9J614 - symbol:TRIM59 "Tripartite motif-contai... 146 2.8e-10 1
UNIPROTKB|C9JE08 - symbol:TRIM59 "Tripartite motif-contai... 146 2.8e-10 1
ZFIN|ZDB-GENE-050327-99 - symbol:trim2a "tripartite motif... 165 4.5e-10 1
UNIPROTKB|F1NKY5 - symbol:TRIM59 "Tripartite motif-contai... 158 1.6e-09 1
UNIPROTKB|Q5ZMD4 - symbol:TRIM59 "Tripartite motif-contai... 158 1.6e-09 1
ZFIN|ZDB-GENE-050522-516 - symbol:trim13 "tripartite moti... 158 1.7e-09 1
WB|WBGene00020628 - symbol:T20F5.6 species:6239 "Caenorha... 160 2.7e-09 1
ZFIN|ZDB-GENE-040625-139 - symbol:trim63 "tripartite moti... 154 3.9e-09 1
UNIPROTKB|E2RKF7 - symbol:RNF224 "Uncharacterized protein... 136 4.4e-09 1
RGD|1311956 - symbol:Trim59 "tripartite motif-containing ... 154 5.6e-09 1
UNIPROTKB|E1C7S4 - symbol:TRIM50 "Uncharacterized protein... 155 5.8e-09 1
UNIPROTKB|F1RMN8 - symbol:TRIM3 "Uncharacterized protein"... 157 6.2e-09 1
UNIPROTKB|C9IZE0 - symbol:TRIM59 "Tripartite motif-contai... 133 9.8e-09 1
UNIPROTKB|C9J9F0 - symbol:TRIM59 "Tripartite motif-contai... 133 9.8e-09 1
ZFIN|ZDB-GENE-041014-342 - symbol:trim54 "tripartite moti... 152 1.1e-08 1
UNIPROTKB|G3N2A0 - symbol:RNF224 "Uncharacterized protein... 132 1.3e-08 1
UNIPROTKB|F1SH50 - symbol:TRIM59 "Uncharacterized protein... 151 1.4e-08 1
UNIPROTKB|G3MWZ4 - symbol:RNF223 "Uncharacterized protein... 146 1.4e-08 1
UNIPROTKB|G3N137 - symbol:G3N137 "Uncharacterized protein... 131 1.7e-08 1
MGI|MGI:1914199 - symbol:Trim59 "tripartite motif-contain... 150 1.8e-08 1
UNIPROTKB|J9P8R5 - symbol:TRIM59 "Uncharacterized protein... 150 1.8e-08 1
UNIPROTKB|Q2KIJ4 - symbol:MGC137058 "Uncharacterized prot... 149 1.9e-08 1
UNIPROTKB|E1BSQ2 - symbol:TRIM63 "Uncharacterized protein... 148 2.4e-08 1
UNIPROTKB|C9JZJ7 - symbol:MID1 "Midline-1" species:9606 "... 126 2.5e-08 2
ZFIN|ZDB-GENE-060929-1090 - symbol:rnf183 "ring finger pr... 146 3.4e-08 1
UNIPROTKB|F1NV67 - symbol:TRIM13 "Uncharacterized protein... 148 3.4e-08 1
UNIPROTKB|F5GZP3 - symbol:TRIM59 "Tripartite motif-contai... 146 3.6e-08 1
UNIPROTKB|F1PXN1 - symbol:RNF223 "Uncharacterized protein... 143 3.7e-08 1
UNIPROTKB|F1RVW2 - symbol:RNF224 "Uncharacterized protein... 127 4.9e-08 1
UNIPROTKB|Q8IWR1 - symbol:TRIM59 "Tripartite motif-contai... 146 5.8e-08 1
UNIPROTKB|J9P779 - symbol:RNF182 "Uncharacterized protein... 126 6.4e-08 1
UNIPROTKB|E7ERA6 - symbol:RNF223 "RING finger protein 223... 140 8.8e-08 1
UNIPROTKB|E2RD64 - symbol:TRIM4 "Uncharacterized protein"... 145 1.0e-07 1
UNIPROTKB|K7EMG3 - symbol:RNF152 "E3 ubiquitin-protein li... 124 1.1e-07 1
MGI|MGI:2685603 - symbol:Gm757 "predicted gene 757" speci... 124 1.1e-07 1
ZFIN|ZDB-GENE-060825-49 - symbol:zgc:153414 "zgc:153414" ... 139 1.1e-07 1
UNIPROTKB|F1P5D7 - symbol:RNF223 "Uncharacterized protein... 136 1.3e-07 1
UNIPROTKB|C9JVS8 - symbol:RNF182 "E3 ubiquitin-protein li... 123 1.4e-07 1
RGD|1564535 - symbol:Rnf224 "ring finger protein 224" spe... 123 1.4e-07 1
UNIPROTKB|E1C2Y2 - symbol:TRIM55 "Uncharacterized protein... 142 1.5e-07 1
UNIPROTKB|P0DH78 - symbol:RNF224 "RING finger protein 224... 122 1.8e-07 1
WB|WBGene00015110 - symbol:B0281.3 species:6239 "Caenorha... 140 2.1e-07 1
UNIPROTKB|H3BRJ5 - symbol:H3BRJ5 "Uncharacterized protein... 146 2.1e-07 1
ZFIN|ZDB-GENE-070705-92 - symbol:si:ch211-202f5.2 "si:ch2... 130 2.2e-07 1
WB|WBGene00003597 - symbol:nhl-1 species:6239 "Caenorhabd... 146 2.2e-07 1
UNIPROTKB|Q03601 - symbol:nhl-1 "RING finger protein nhl-... 146 2.2e-07 1
UNIPROTKB|Q969Q1 - symbol:TRIM63 "E3 ubiquitin-protein li... 140 2.4e-07 1
UNIPROTKB|D6RAL3 - symbol:SH3RF1 "E3 ubiquitin-protein li... 120 3.1e-07 1
UNIPROTKB|D6RHX5 - symbol:SH3RF1 "E3 ubiquitin-protein li... 120 3.1e-07 1
UNIPROTKB|E2RCM9 - symbol:TRIM63 "Uncharacterized protein... 139 3.2e-07 1
UNIPROTKB|K7GKI3 - symbol:TRIM55 "Uncharacterized protein... 138 3.6e-07 1
RGD|1307609 - symbol:Trim13 "tripartite motif-containing ... 139 4.2e-07 1
UNIPROTKB|I3L5M6 - symbol:TRIM63 "Uncharacterized protein... 138 4.2e-07 1
UNIPROTKB|Q5JVY0 - symbol:TRIM32 "E3 ubiquitin-protein li... 124 4.3e-07 1
DICTYBASE|DDB_G0286991 - symbol:DDB_G0286991 species:4468... 139 5.2e-07 1
MGI|MGI:2447992 - symbol:Trim63 "tripartite motif-contain... 137 5.5e-07 1
RGD|619964 - symbol:Trim63 "tripartite motif containing 6... 137 5.5e-07 1
UNIPROTKB|Q91Z63 - symbol:Trim63 "E3 ubiquitin-protein li... 137 5.5e-07 1
UNIPROTKB|Q2KI94 - symbol:TRIM63 "Tripartite motif-contai... 137 5.7e-07 1
UNIPROTKB|F1MU01 - symbol:TRIM55 "Uncharacterized protein... 138 5.7e-07 1
UNIPROTKB|I3LQP1 - symbol:TRIM55 "Uncharacterized protein... 130 5.7e-07 1
UNIPROTKB|I3L6F4 - symbol:TRIM55 "Uncharacterized protein... 138 6.4e-07 1
UNIPROTKB|C9IZ30 - symbol:RNF182 "E3 ubiquitin-protein li... 117 6.8e-07 1
UNIPROTKB|Q9BYV6 - symbol:TRIM55 "Tripartite motif-contai... 139 7.0e-07 1
WB|WBGene00021763 - symbol:Y51F10.2 species:6239 "Caenorh... 135 7.1e-07 1
UNIPROTKB|Q58D15 - symbol:TRIM54 "Tripartite motif-contai... 136 7.9e-07 1
ZFIN|ZDB-GENE-060312-37 - symbol:trim55b "tripartite moti... 136 7.9e-07 1
WB|WBGene00022870 - symbol:ZK1240.5 species:6239 "Caenorh... 134 8.1e-07 1
ZFIN|ZDB-GENE-040801-100 - symbol:trim101 "tripartite mot... 137 8.2e-07 1
WARNING: Descriptions of 235 database sequences were not reported due to the
limiting value of parameter V = 100.
>WB|WBGene00003599 [details] [associations]
symbol:nhl-3 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001298 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00557 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 EMBL:FO081702 GeneID:173452 KEGG:cel:CELE_W04H10.3
CTD:173452 RefSeq:NP_001040817.2 ProteinModelPortal:H2L0K3
SMR:H2L0K3 EnsemblMetazoa:W04H10.3a WormBase:W04H10.3a OMA:SYKGDFL
Uniprot:H2L0K3
Length = 698
Score = 459 (166.6 bits), Expect = 3.8e-43, P = 3.8e-43
Identities = 83/156 (53%), Positives = 108/156 (69%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAA-SQTRETGTLRCPI 79
IN +DF+E+FLTC TCL YDG PKLLPCSH+VCL C++++A S + TLRCP+
Sbjct: 13 INVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLFCVTQLAELSPETQPPTLRCPL 72
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQ 139
CRE IP GGV P +F +NQLLD+M QR+ ++P CS H + +LL+CETCD VFC
Sbjct: 73 CREVCPIPAGGVILFPAAFFINQLLDVMQIQRKDVVPSCSNHPTDQLLYCETCDLVFCEN 132
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKA 175
C + EHT++P SIAIKRMSEI++Y+A
Sbjct: 133 CQDSVVNKKCD---EHTVVPLSIAIKRMSEIVVYRA 165
>ZFIN|ZDB-GENE-080522-4 [details] [associations]
symbol:trim3a "tripartite motif-containing 3a"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 ZFIN:ZDB-GENE-080522-4
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 EMBL:AL935181 IPI:IPI00491402
Ensembl:ENSDART00000093367 Uniprot:E7F1U3
Length = 774
Score = 170 (64.9 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 21 DKQFLVCSICLEHY----HNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSIL 73
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQR 111
P GVAAL +F + L++++ R++
Sbjct: 74 PEKGVAALQNNFFITNLMEVLQREQ 98
Score = 77 (32.2 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 118 CSTHNSQELLF-CETCDTVFCLQCTGGSNHSSTSGDSEHTIIP 159
C H + + F CE+C+T CL+CT G + EH +P
Sbjct: 123 CPNHEGKVMEFYCESCETAMCLECTEGEHR-------EHVTVP 158
>UNIPROTKB|C9JVI3 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 HGNC:HGNC:15974 ChiTaRS:TRIM2
EMBL:AC013477 EMBL:AC114791 IPI:IPI00925733
ProteinModelPortal:C9JVI3 SMR:C9JVI3 STRING:C9JVI3
Ensembl:ENST00000441616 UCSC:uc003ini.1 HOGENOM:HOG000198480
ArrayExpress:C9JVI3 Bgee:C9JVI3 Uniprot:C9JVI3
Length = 138
Score = 159 (61.0 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GVAAL +F + L+D++ R
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQR 92
Score = 48 (22.0 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 118 CSTHNSQELLF-CETCDTVFC 137
C H+ + F C++C+T C
Sbjct: 118 CPNHDGNVMEFYCQSCETAMC 138
>UNIPROTKB|E9PMK8 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003649
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC084337 InterPro:IPR017907 HGNC:HGNC:10064 IPI:IPI00984864
ProteinModelPortal:E9PMK8 SMR:E9PMK8 Ensembl:ENST00000528227
ArrayExpress:E9PMK8 Bgee:E9PMK8 Uniprot:E9PMK8
Length = 261
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRYQ----CPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>UNIPROTKB|J9NRL4 [details] [associations]
symbol:TRIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074377 EMBL:AAEX03010054
Ensembl:ENSCAFT00000048424 OMA:REHSTHI Uniprot:J9NRL4
Length = 242
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDFY 129
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 130 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 184
>MGI|MGI:2685298 [details] [associations]
symbol:Trim56 "tripartite motif-containing 56" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0032608
"interferon-beta production" evidence=IMP] [GO:0034340 "response to
type I interferon" evidence=IDA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 MGI:MGI:2685298 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 GO:GO:0051607 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534
GeneTree:ENSGT00550000074377 GO:GO:0034340 GO:GO:0032608 CTD:81844
eggNOG:NOG301641 HOGENOM:HOG000154679 HOVERGEN:HBG079280 KO:K12026
OrthoDB:EOG44F68K ChiTaRS:TRIM56 EMBL:AK037350 EMBL:BC045615
IPI:IPI00453527 RefSeq:NP_958761.1 UniGene:Mm.100647
ProteinModelPortal:Q80VI1 SMR:Q80VI1 PhosphoSite:Q80VI1
PaxDb:Q80VI1 PRIDE:Q80VI1 Ensembl:ENSMUST00000054384 GeneID:384309
KEGG:mmu:384309 UCSC:uc009abp.1 InParanoid:Q80VI1 NextBio:404511
Bgee:Q80VI1 CleanEx:MM_TRIM56 Genevestigator:Q80VI1
GermOnline:ENSMUSG00000043279 Uniprot:Q80VI1
Length = 734
Score = 169 (64.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 37/84 (44%), Positives = 46/84 (54%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL HTPK LPC HT C CL+++ G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----HTPKTLPCLHTYCQDCLAQLDIG-----GQVRCPECREI 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVAA +F VN LLDL+
Sbjct: 63 VPVPAEGVAAFKTNFFVNGLLDLV 86
Score = 54 (24.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 105 DLMSRQRRHIIPKCSTHNSQELLF-CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIA 163
D +R+R+ +C H + L F C+ C + C C G + +H +P + A
Sbjct: 158 DEEARERQ--ASQCPQHPGEALCFLCQPCSQLLCKDCRLGPH-------IDHPCLPLAEA 208
Query: 164 IK 165
++
Sbjct: 209 VR 210
>UNIPROTKB|F5GX85 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR013017 PROSITE:PS51125 EMBL:AC084337 InterPro:IPR017907
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 IPI:IPI00985414
HGNC:HGNC:10064 ProteinModelPortal:F5GX85 SMR:F5GX85
Ensembl:ENST00000537602 ArrayExpress:F5GX85 Bgee:F5GX85
Uniprot:F5GX85
Length = 666
Score = 183 (69.5 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRYQ----CPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>UNIPROTKB|E9PKS6 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR013017 PROSITE:PS51125 EMBL:AC084337 InterPro:IPR017907
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 HGNC:HGNC:10064
IPI:IPI00983536 ProteinModelPortal:E9PKS6 SMR:E9PKS6
Ensembl:ENST00000530899 ArrayExpress:E9PKS6 Bgee:E9PKS6
Uniprot:E9PKS6
Length = 742
Score = 183 (69.5 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRYQ----CPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>UNIPROTKB|A7MB36 [details] [associations]
symbol:TRIM3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 OrthoDB:EOG46T30V CTD:10612
OMA:CESCLQN EMBL:DAAA02040854 EMBL:BC151315 IPI:IPI00710951
RefSeq:NP_001094627.1 UniGene:Bt.45458 Ensembl:ENSBTAT00000004636
GeneID:534510 KEGG:bta:534510 InParanoid:A7MB36 NextBio:20876427
Uniprot:A7MB36
Length = 744
Score = 183 (69.5 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>UNIPROTKB|E2QVW6 [details] [associations]
symbol:TRIM3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 CTD:10612 OMA:CESCLQN
EMBL:AAEX03012863 EMBL:AAEX03012864 RefSeq:XP_534038.2
Ensembl:ENSCAFT00000010416 GeneID:476834 KEGG:cfa:476834
NextBio:20852433 Uniprot:E2QVW6
Length = 744
Score = 183 (69.5 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>UNIPROTKB|O75382 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0008022
"protein C-terminus binding" evidence=TAS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 GO:GO:0005737 GO:GO:0007399
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CH471064 GO:GO:0046872
GO:GO:0015031 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0008022 GO:GO:0005769 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 EMBL:AC084337 InterPro:IPR017907
KO:K11997 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 OrthoDB:EOG46T30V
EMBL:AF045239 EMBL:AF220020 EMBL:AF220021 EMBL:AF220022
EMBL:AK291396 EMBL:AK298843 EMBL:BC096827 IPI:IPI00152001
IPI:IPI00216078 IPI:IPI00985414 IPI:IPI01014134
RefSeq:NP_001234935.1 RefSeq:NP_001234936.1 RefSeq:NP_006449.2
RefSeq:NP_150594.2 UniGene:Hs.591992 ProteinModelPortal:O75382
SMR:O75382 IntAct:O75382 STRING:O75382 PhosphoSite:O75382
PRIDE:O75382 Ensembl:ENST00000345851 Ensembl:ENST00000359518
Ensembl:ENST00000525074 Ensembl:ENST00000536344 GeneID:10612
KEGG:hsa:10612 UCSC:uc001mdh.3 CTD:10612 GeneCards:GC11M006469
HGNC:HGNC:10064 MIM:605493 neXtProt:NX_O75382 PharmGKB:PA35534
InParanoid:O75382 OMA:CESCLQN PhylomeDB:O75382 GenomeRNAi:10612
NextBio:40314 ArrayExpress:O75382 Bgee:O75382 CleanEx:HS_TRIM3
Genevestigator:O75382 GermOnline:ENSG00000110171 Uniprot:O75382
Length = 744
Score = 183 (69.5 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRYQ----CPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>UNIPROTKB|C9JI91 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC105446 IPI:IPI00871506
HGNC:HGNC:19028 ChiTaRS:TRIM56 ProteinModelPortal:C9JI91 SMR:C9JI91
STRING:C9JI91 Ensembl:ENST00000412507 UCSC:uc003uxr.3 OMA:CEICRET
ArrayExpress:C9JI91 Bgee:C9JI91 Uniprot:C9JI91
Length = 305
Score = 161 (61.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLV 86
Score = 53 (23.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 105 DLMSRQRRHIIPKCSTHNSQELLF-CETCDTVFCLQC 140
D +R+R+ +C H + L F C+ C + C +C
Sbjct: 158 DEEARERQ--AAQCPQHPGEALRFLCQPCSQLLCREC 192
>UNIPROTKB|D4A8U3 [details] [associations]
symbol:Trim3 "Tripartite motif-containing protein 3"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 RGD:70074 Prosite:PS00518
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
OrthoDB:EOG46T30V IPI:IPI00950833 Ensembl:ENSRNOT00000067111
ArrayExpress:D4A8U3 Uniprot:D4A8U3
Length = 715
Score = 181 (68.8 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>MGI|MGI:1860040 [details] [associations]
symbol:Trim3 "tripartite motif-containing 3" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 MGI:MGI:1860040 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0015031
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0005769 eggNOG:COG3391 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 GeneTree:ENSGT00550000074377
KO:K11997 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 OrthoDB:EOG46T30V CTD:10612
OMA:CESCLQN EMBL:AB030912 EMBL:AF220019 EMBL:AK019165 EMBL:AK144674
EMBL:BC034263 IPI:IPI00129020 RefSeq:NP_061368.1 UniGene:Mm.29290
ProteinModelPortal:Q9R1R2 SMR:Q9R1R2 IntAct:Q9R1R2 STRING:Q9R1R2
PhosphoSite:Q9R1R2 PaxDb:Q9R1R2 PRIDE:Q9R1R2
Ensembl:ENSMUST00000057525 Ensembl:ENSMUST00000106789 GeneID:55992
KEGG:mmu:55992 UCSC:uc009iym.1 InParanoid:Q9R1R2 ChiTaRS:TRIM3
NextBio:311722 Bgee:Q9R1R2 CleanEx:MM_TRIM3 Genevestigator:Q9R1R2
GermOnline:ENSMUSG00000036989 Uniprot:Q9R1R2
Length = 744
Score = 181 (68.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPEGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>RGD|70074 [details] [associations]
symbol:Trim3 "tripartite motif-containing 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA;ISO;IDA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 RGD:70074 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0015031
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0005769 eggNOG:COG3391 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 KO:K11997 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 HOGENOM:HOG000220817 HOVERGEN:HBG054843
CTD:10612 EMBL:AF036255 IPI:IPI00196677 RefSeq:NP_113974.1
UniGene:Rn.203982 ProteinModelPortal:O70277 IntAct:O70277
STRING:O70277 PhosphoSite:O70277 GeneID:83616 KEGG:rno:83616
UCSC:RGD:70074 InParanoid:O70277 NextBio:616169 ArrayExpress:O70277
Genevestigator:O70277 GermOnline:ENSRNOG00000018356 Uniprot:O70277
Length = 744
Score = 181 (68.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>UNIPROTKB|O70277 [details] [associations]
symbol:Trim3 "Tripartite motif-containing protein 3"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557 RGD:70074
Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0015031 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0005769 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 HOVERGEN:HBG054843 CTD:10612 EMBL:AF036255
IPI:IPI00196677 RefSeq:NP_113974.1 UniGene:Rn.203982
ProteinModelPortal:O70277 IntAct:O70277 STRING:O70277
PhosphoSite:O70277 GeneID:83616 KEGG:rno:83616 UCSC:RGD:70074
InParanoid:O70277 NextBio:616169 ArrayExpress:O70277
Genevestigator:O70277 GermOnline:ENSRNOG00000018356 Uniprot:O70277
Length = 744
Score = 181 (68.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR--------QRRHII------P-KCSTHNSQELLF 128
+P GV+AL +F ++ L++ M + + H + P C H + + F
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEGKTMEF 125
Query: 129 -CETCDTVFCLQCTGGSN 145
CE C+T C +C G +
Sbjct: 126 YCEACETAMCGECRAGEH 143
>ZFIN|ZDB-GENE-070112-1132 [details] [associations]
symbol:trim3b "tripartite motif-containing 3b"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 ZFIN:ZDB-GENE-070112-1132
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 EMBL:BX511060 EMBL:BX530019
EMBL:BX530069 IPI:IPI00931336 Ensembl:ENSDART00000109183
Bgee:E7F959 Uniprot:E7F959
Length = 772
Score = 178 (67.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 47/157 (29%), Positives = 69/157 (43%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y H PK+LPC HT C CL Q+ TL CP+CR+ +
Sbjct: 21 DKQFLVCSICLDHY----HNPKVLPCLHTFCERCLQNYIPPQSL---TLSCPVCRQTSIL 73
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-CSTHNSQEL------LFCETCD----TV 135
P GVAAL +F + L++++ R P+ CS S L C +
Sbjct: 74 PEKGVAALQNNFFITNLMEVLQRDSECSRPEACSVLESVSAAAAGKPLSCPNHEGKVMEF 133
Query: 136 FCLQCTGGSNHSSTSGDS-EHTIIPFSIAIKRMSEIL 171
+C C T G+ EH +P +++ +L
Sbjct: 134 YCESCETAMCLECTEGEHREHVTVPLRDVLEQHKAVL 170
>UNIPROTKB|Q9C040 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043523
"regulation of neuron apoptotic process" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
HOGENOM:HOG000220817 CTD:23321 HOVERGEN:HBG054843 OrthoDB:EOG46T30V
EMBL:AF220018 EMBL:AB011089 EMBL:BC005016 EMBL:BC011052
EMBL:AL110234 IPI:IPI00153011 PIR:T00082 RefSeq:NP_001123539.1
RefSeq:NP_056086.2 UniGene:Hs.435711 ProteinModelPortal:Q9C040
SMR:Q9C040 IntAct:Q9C040 STRING:Q9C040 PhosphoSite:Q9C040
DMDM:21363034 PaxDb:Q9C040 PeptideAtlas:Q9C040 PRIDE:Q9C040
DNASU:23321 Ensembl:ENST00000437508 GeneID:23321 KEGG:hsa:23321
UCSC:uc003ing.2 GeneCards:GC04P154073 HGNC:HGNC:15974 HPA:HPA035853
HPA:HPA035854 MIM:614141 neXtProt:NX_Q9C040 PharmGKB:PA38070
InParanoid:Q9C040 PhylomeDB:Q9C040 ChiTaRS:TRIM2 GenomeRNAi:23321
NextBio:45216 ArrayExpress:Q9C040 Bgee:Q9C040 CleanEx:HS_TRIM2
Genevestigator:Q9C040 GermOnline:ENSG00000109654 Uniprot:Q9C040
Length = 744
Score = 176 (67.0 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFY 129
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 130 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 184
>UNIPROTKB|D2GXS7 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9646 "Ailuropoda melanoleuca" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0043523
"regulation of neuron apoptotic process" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 EMBL:GL192370 ProteinModelPortal:D2GXS7
HOGENOM:HOG000220817 Uniprot:D2GXS7
Length = 744
Score = 176 (67.0 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMDFY 129
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 130 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 184
>UNIPROTKB|F7H9X2 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9483 "Callithrix jacchus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0043523 "regulation of neuron
apoptotic process" evidence=ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 GeneTree:ENSGT00550000074377
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 CTD:23321
OMA:AGPPCQW EMBL:ACFV01002178 EMBL:ACFV01002179 EMBL:ACFV01002180
EMBL:ACFV01002181 EMBL:ACFV01002182 EMBL:ACFV01002183
EMBL:ACFV01002184 EMBL:ACFV01002185 EMBL:ACFV01002186
EMBL:ACFV01002187 EMBL:ACFV01002188 EMBL:ACFV01002189
EMBL:ACFV01002190 EMBL:ACFV01002191 EMBL:ACFV01002192
EMBL:ACFV01002193 EMBL:ACFV01002194 EMBL:ACFV01002195
EMBL:ACFV01002196 RefSeq:XP_002745432.1 ProteinModelPortal:F7H9X2
Ensembl:ENSCJAT00000003816 GeneID:100408235 Uniprot:F7H9X2
Length = 744
Score = 176 (67.0 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRTPGSNVEESSILETVTAVAAGKPLSCPNHDGNVMEFY 129
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 130 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 184
>UNIPROTKB|F1NEW3 [details] [associations]
symbol:TRIM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043523 "regulation of neuron
apoptotic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0004842
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 OMA:AGPPCQW EMBL:AADN02016559 EMBL:AADN02016560
IPI:IPI00573431 Ensembl:ENSGALT00000014990 Uniprot:F1NEW3
Length = 755
Score = 176 (67.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/177 (28%), Positives = 77/177 (43%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 28 DKQFLICSICLDRYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 80
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL------LFCETCD----TVF 136
P GV+AL +F + L+D++ R + I + S + L C D +
Sbjct: 81 PEKGVSALQNNFFITNLMDVLQRTPENSIEESSILETVTAVAAGKPLSCPNHDGNVMEFY 140
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
C C T G+ +EH +P +++ L + + S NK PE S L
Sbjct: 141 CRSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---SVNKRLPEIDSAL 194
>UNIPROTKB|D3DP09 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 EMBL:CH471056
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 KO:K11997 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 HOGENOM:HOG000220817 CTD:23321 OMA:AGPPCQW
RefSeq:NP_056086.2 UniGene:Hs.435711 DNASU:23321 GeneID:23321
KEGG:hsa:23321 HGNC:HGNC:15974 ChiTaRS:TRIM2 GenomeRNAi:23321
NextBio:45216 EMBL:AC013477 EMBL:AC114791 IPI:IPI00910066
ProteinModelPortal:D3DP09 SMR:D3DP09 Ensembl:ENST00000338700
UCSC:uc003inh.2 ArrayExpress:D3DP09 Bgee:D3DP09 Uniprot:D3DP09
Length = 771
Score = 176 (67.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 44 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 96
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 97 PEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFY 156
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 157 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 211
>UNIPROTKB|I3L8U3 [details] [associations]
symbol:TRIM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 OMA:AGPPCQW EMBL:FP236133
EMBL:CU467574 Ensembl:ENSSSCT00000026657 Uniprot:I3L8U3
Length = 761
Score = 175 (66.7 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 34 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAYSL---TLSCPVCRQTSIL 86
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 87 PEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMDFY 146
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 147 CQSCETAMCQECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 201
>UNIPROTKB|A4IF63 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9913 "Bos taurus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 HOGENOM:HOG000220817 EMBL:BC134423
EMBL:AAFC03054408 IPI:IPI00728692 RefSeq:NP_001077204.1
UniGene:Bt.37228 ProteinModelPortal:A4IF63
Ensembl:ENSBTAT00000011609 GeneID:538617 KEGG:bta:538617 CTD:23321
HOVERGEN:HBG054843 InParanoid:A4IF63 OMA:AGPPCQW OrthoDB:EOG46T30V
NextBio:20877476 ArrayExpress:A4IF63 Uniprot:A4IF63
Length = 744
Score = 174 (66.3 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDFY 129
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + N+ PE S L+
Sbjct: 130 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AANRRLPEIDSALQ 184
>MGI|MGI:1933163 [details] [associations]
symbol:Trim2 "tripartite motif-containing 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;NAS] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=NAS] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0017022 "myosin binding" evidence=NAS]
[GO:0043523 "regulation of neuron apoptotic process"
evidence=ISO;IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00502 SMART:SM00557 UniPathway:UPA00143 MGI:MGI:1933163
Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0017022 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 KO:K11997
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 CleanEx:MM_NARF
HOGENOM:HOG000220817 CTD:23321 HOVERGEN:HBG054843 OrthoDB:EOG46T30V
ChiTaRS:TRIM2 EMBL:AB043550 EMBL:AF220017 EMBL:AK042752
EMBL:AK045410 EMBL:AK079415 EMBL:AK147275 EMBL:AK220343
EMBL:BC058961 IPI:IPI00113430 RefSeq:NP_001258655.1
RefSeq:NP_001258656.1 RefSeq:NP_001258657.1 RefSeq:NP_109631.2
UniGene:Mm.44876 UniGene:Mm.487650 ProteinModelPortal:Q9ESN6
SMR:Q9ESN6 DIP:DIP-46254N STRING:Q9ESN6 PhosphoSite:Q9ESN6
PaxDb:Q9ESN6 PRIDE:Q9ESN6 Ensembl:ENSMUST00000065380
Ensembl:ENSMUST00000107691 Ensembl:ENSMUST00000107692
Ensembl:ENSMUST00000107693 GeneID:80890 KEGG:mmu:80890
InParanoid:Q5DU27 NextBio:350219 Bgee:Q9ESN6 CleanEx:MM_TRIM2
Genevestigator:Q9ESN6 GermOnline:ENSMUSG00000027993 Uniprot:Q9ESN6
Length = 744
Score = 174 (66.3 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRTPGSNGEDSSILETVTAVAAGKPLSCPNHDGNVMEFY 129
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 130 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 184
>RGD|1310981 [details] [associations]
symbol:Trim2 "tripartite motif-containing 2" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISO;ISS;IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
UniPathway:UPA00143 RGD:1310981 Prosite:PS00518 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0004842 GO:GO:0043523 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 KO:K11997 InterPro:IPR017868
Pfam:PF00630 EMBL:CH473976 PROSITE:PS50194 CTD:23321
OrthoDB:EOG46T30V IPI:IPI00763055 RefSeq:NP_001102022.1
UniGene:Rn.16973 PRIDE:D3ZQG6 Ensembl:ENSRNOT00000013935
GeneID:361970 KEGG:rno:361970 UCSC:RGD:1310981 NextBio:678221
ArrayExpress:D3ZQG6 Uniprot:D3ZQG6
Length = 744
Score = 173 (66.0 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL + + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSR------QRRHIIPKCSTHNSQELLFCETCD----TVF 136
P GVAAL +F + L+D++ R + I+ + + + L C D +
Sbjct: 70 PEKGVAALQNNFFITNLMDVLQRTPGSNGEDPSILQTVTAVAAGKPLSCPNHDGNVMEFY 129
Query: 137 CLQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C C T G+ +EH +P +++ L + + + NK PE S L+
Sbjct: 130 CQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLD---AVNKRLPEIDSALQ 184
>UNIPROTKB|E9PMW5 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC084337 InterPro:IPR017907 IPI:IPI00985414
HGNC:HGNC:10064 ProteinModelPortal:E9PMW5 SMR:E9PMW5
Ensembl:ENST00000529529 ArrayExpress:E9PMW5 Bgee:E9PMW5
Uniprot:E9PMW5
Length = 96
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
+ ++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+
Sbjct: 13 QPMDKQFLVCSICLDRYQ----CPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQT 65
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSR 109
+P GV+AL +F ++ L++ M +
Sbjct: 66 SILPEQGVSALQNNFFISSLMEAMQQ 91
>UNIPROTKB|Q9BRZ2 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS] [GO:0051607
"defense response to virus" evidence=ISS] [GO:0034340 "response to
type I interferon" evidence=ISS] [GO:0032608 "interferon-beta
production" evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0051607
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 GO:GO:0034340 GO:GO:0032608
EMBL:AC105446 EMBL:AK075255 EMBL:AK092927 EMBL:BC005847
EMBL:BC011882 EMBL:BC048194 EMBL:AL512757 IPI:IPI00514832
IPI:IPI00871506 IPI:IPI00872056 RefSeq:NP_112223.1
UniGene:Hs.521092 ProteinModelPortal:Q9BRZ2 SMR:Q9BRZ2
IntAct:Q9BRZ2 STRING:Q9BRZ2 PhosphoSite:Q9BRZ2 DMDM:56749788
PaxDb:Q9BRZ2 PeptideAtlas:Q9BRZ2 PRIDE:Q9BRZ2 DNASU:81844
Ensembl:ENST00000306085 GeneID:81844 KEGG:hsa:81844 UCSC:uc003uxq.3
CTD:81844 GeneCards:GC07P100728 H-InvDB:HIX0006941 HGNC:HGNC:19028
HPA:HPA024358 neXtProt:NX_Q9BRZ2 PharmGKB:PA134958549
eggNOG:NOG301641 HOGENOM:HOG000154679 HOVERGEN:HBG079280
InParanoid:Q9BRZ2 KO:K12026 OrthoDB:EOG44F68K ChiTaRS:TRIM56
GenomeRNAi:81844 NextBio:72142 ArrayExpress:Q9BRZ2 Bgee:Q9BRZ2
CleanEx:HS_TRIM56 Genevestigator:Q9BRZ2 Uniprot:Q9BRZ2
Length = 755
Score = 161 (61.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A + G +RCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLA-----DGGRVRCPECRET 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLM 107
+ +P GVA+ +F VN LLDL+
Sbjct: 63 VPVPPEGVASFKTNFFVNGLLDLV 86
Score = 53 (23.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 105 DLMSRQRRHIIPKCSTHNSQELLF-CETCDTVFCLQC 140
D +R+R+ +C H + L F C+ C + C +C
Sbjct: 158 DEEARERQ--AAQCPQHPGEALRFLCQPCSQLLCREC 192
>UNIPROTKB|C9IY67 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834 IPI:IPI00946493
ProteinModelPortal:C9IY67 SMR:C9IY67 STRING:C9IY67
Ensembl:ENST00000496222 HOGENOM:HOG000199013 ArrayExpress:C9IY67
Bgee:C9IY67 Uniprot:C9IY67
Length = 179
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 45/141 (31%), Positives = 65/141 (46%)
Query: 21 INYEDFN-ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT 74
IN E N E LTC C +++ P++LPCSHT C +CL I AS R
Sbjct: 25 INKEMHNFEEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRI 80
Query: 75 -LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETC 132
L+CP CR I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 81 PLKCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLD 140
Query: 133 DTVFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 141 KKLVCGHCLTIGQHHGHPIDD 161
>UNIPROTKB|E1BD59 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9913 "Bos taurus" [GO:0032608 "interferon-beta production"
evidence=ISS] [GO:0034340 "response to type I interferon"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0051607
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 GO:GO:0034340 GO:GO:0032608
EMBL:AAFC03118057 IPI:IPI01000920 UniGene:Bt.21963 Uniprot:E1BD59
Length = 732
Score = 168 (64.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 48/147 (32%), Positives = 61/147 (41%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR----RHIIPKCS--------THNSQELLFCET 131
+ +P GVAA +F VN LLDL+ + R P C+ + C
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVKARAGGDLRAGKPACALCPLMGGASAGGPATARCLD 122
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTII 158
C C C G H T H ++
Sbjct: 123 CADDLCQACADG--HRCTRQTHSHRVV 147
>UNIPROTKB|G5E5F1 [details] [associations]
symbol:TRIM56 "E3 ubiquitin-protein ligase TRIM56"
species:9913 "Bos taurus" [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0051607 "defense response to
virus" evidence=IEA] [GO:0034340 "response to type I interferon"
evidence=IEA] [GO:0032608 "interferon-beta production"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0051607
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 GeneTree:ENSGT00550000074377
GO:GO:0034340 GO:GO:0032608 EMBL:DAAA02058268
Ensembl:ENSBTAT00000015969 OMA:SNGTIHV Uniprot:G5E5F1
Length = 732
Score = 168 (64.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 48/147 (32%), Positives = 61/147 (41%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
E + FL C CL PK LPC HT C CL+++A E LRCP CRE
Sbjct: 12 EALSSDFLACKICLEQL----RVPKTLPCLHTYCQDCLAQLA-----EGSRLRCPECRES 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR----RHIIPKCS--------THNSQELLFCET 131
+ +P GVAA +F VN LLDL+ + R P C+ + C
Sbjct: 63 VPVPPAGVAAFKTNFFVNGLLDLVKARAGGDLRAGKPACALCPLMGGASAGGPATARCLD 122
Query: 132 CDTVFCLQCTGGSNHSSTSGDSEHTII 158
C C C G H T H ++
Sbjct: 123 CADDLCQACADG--HRCTRQTHSHRVV 147
>UNIPROTKB|C9J614 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00947059
ProteinModelPortal:C9J614 SMR:C9J614 STRING:C9J614
Ensembl:ENST00000479460 ArrayExpress:C9J614 Bgee:C9J614
Uniprot:C9J614
Length = 177
Score = 146 (56.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I G+ +LP +F + +++ ++ I C H Q L ++C + C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GHCLTIGQHHGHPIDD 133
>UNIPROTKB|C9JE08 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00947483
ProteinModelPortal:C9JE08 SMR:C9JE08 STRING:C9JE08
Ensembl:ENST00000471396 ArrayExpress:C9JE08 Bgee:C9JE08
Uniprot:C9JE08
Length = 155
Score = 146 (56.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I G+ +LP +F + +++ ++ I C H Q L ++C + C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GHCLTIGQHHGHPIDD 133
>ZFIN|ZDB-GENE-050327-99 [details] [associations]
symbol:trim2a "tripartite motif-containing 2a"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
SMART:SM00557 Prosite:PS00518 ZFIN:ZDB-GENE-050327-99
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 KO:K11997 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 HOGENOM:HOG000220817 HOVERGEN:HBG054843
EMBL:BC091789 IPI:IPI00511957 RefSeq:NP_001014393.1
UniGene:Dr.39320 ProteinModelPortal:Q58ER5 GeneID:100003782
KEGG:dre:100003782 CTD:100003782 InParanoid:Q58ER5 NextBio:20785982
Uniprot:Q58ER5
Length = 744
Score = 165 (63.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y+ PK+LPC HT C CL + TL CP+CR+ +
Sbjct: 17 DKQFLICSICLDRYNN----PKVLPCLHTFCERCLQNYIPPHSL---TLSCPVCRQTSIL 69
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH--N---SQELLFCETCD----TVFC 137
P GVAAL +F + L++++ + + + T N + + L C +C
Sbjct: 70 PEKGVAALQSNFFITNLMEVLKKSPNSNLSEDYTDAINGVATGQPLSCPNHGGNVMEFYC 129
Query: 138 LQCTGGSNHSSTSGD-SEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
C TSG+ +EH +P +++ + L + + V KN++ PE +S L
Sbjct: 130 PPCETAMCEECTSGEHAEHATVPLKDVLEQ-HKASLQEQLDAV-KNRL-PEIESAL 182
>UNIPROTKB|F1NKY5 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101726 IPI:IPI00594106 OMA:LFFNQHI
EMBL:AADN02021066 PRIDE:F1NKY5 Ensembl:ENSGALT00000039192
Uniprot:F1NKY5
Length = 408
Score = 158 (60.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET------GTLRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRSCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ IP G +LP +F + +++ ++ + CS H Q L ++C + C C
Sbjct: 61 SIVEIPASGTESLPINFALKAIIEKYRQEDHSDVATCSEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 TGGSNHSSTSGDSEHT 156
H+ D H+
Sbjct: 121 LTIGKHNGHPIDDLHS 136
>UNIPROTKB|Q5ZMD4 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9031 "Gallus gallus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OrthoDB:EOG4K3KX1 HSSP:Q13049 EMBL:AJ719450
IPI:IPI00594106 RefSeq:NP_001026491.1 UniGene:Gga.5805
ProteinModelPortal:Q5ZMD4 GeneID:425013 KEGG:gga:425013 CTD:286827
eggNOG:NOG284906 HOGENOM:HOG000013095 HOVERGEN:HBG060002
InParanoid:Q5ZMD4 KO:K12028 NextBio:20827264 Uniprot:Q5ZMD4
Length = 408
Score = 158 (60.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET------GTLRCPICR 81
E LTC C +++ P++LPCSHT C CL + + + L+CP CR
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRSCLEGVIQLSSNFSIWRPLRVPLKCPNCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQC 140
+ IP G +LP +F + +++ ++ + CS H Q L ++C + C C
Sbjct: 61 SIVEIPASGTESLPINFALKAIIEKYRQEDHSDVATCSEHYRQPLNVYCLLDKKLVCGHC 120
Query: 141 TGGSNHSSTSGDSEHT 156
H+ D H+
Sbjct: 121 LTIGKHNGHPIDDLHS 136
>ZFIN|ZDB-GENE-050522-516 [details] [associations]
symbol:trim13 "tripartite motif-containing 13"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-050522-516 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101726 EMBL:CU855930
Ensembl:ENSDART00000023210 Bgee:H9KUW1 Uniprot:H9KUW1
Length = 414
Score = 158 (60.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 38/125 (30%), Positives = 64/125 (51%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGT--LRCPICREQIT 85
E LTC C C+++ P++LPCSH+ C CL I T +CP CR++ T
Sbjct: 15 EEDLTCPICCCLFED----PRVLPCSHSFCKKCLEGILDGNRSPTWRPPFKCPTCRKE-T 69
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK---CSTHNSQEL-LFCETCDTVFCLQCT 141
+ G+A+L ++ + +++ +R R ++P+ C H+ Q L +FC T + C C
Sbjct: 70 V-HNGIASLQVNYSLRGIVEKYNRIR--VMPRMSQCRVHSGQPLNIFCATDLKLICGFCA 126
Query: 142 GGSNH 146
+H
Sbjct: 127 TTGDH 131
>WB|WBGene00020628 [details] [associations]
symbol:T20F5.6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FO080916 PIR:T29211 RefSeq:NP_491266.1
ProteinModelPortal:P91482 SMR:P91482 IntAct:P91482 MINT:MINT-114502
STRING:P91482 PaxDb:P91482 EnsemblMetazoa:T20F5.6.1
EnsemblMetazoa:T20F5.6.2 GeneID:171978 KEGG:cel:CELE_T20F5.6
UCSC:T20F5.6.1 CTD:171978 WormBase:T20F5.6 eggNOG:NOG285661
InParanoid:P91482 OMA:ALELEWI NextBio:873501 Uniprot:P91482
Length = 794
Score = 160 (61.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 46/155 (29%), Positives = 74/155 (47%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETG-TLRCPICREQITIPRG 89
L+CG C ++ G+ PK+ PC HT+CL C+ ++ ++T G T+ CP CR+
Sbjct: 114 LSCGICYDPFNTGKRIPKVFPCGHTICLQCIKKLLNTRTFLGGNTVICPSCRQNTRYSLT 173
Query: 90 GVA-ALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT-VFCLQCTGGSNHS 147
A +P +F + LL+ RQ+ ST E + C C T V ++ T S+ +
Sbjct: 174 TPADKIPTNFCIQSLLE--QRQQEK-----ST-KEPEAVKCTECHTTVSAIEATTCSDET 225
Query: 148 STSGDSEHTIIPFSIAIKRMSEILLYKANECVSKN 182
SE + IKR E L+ ++ C+ N
Sbjct: 226 CQKEISEEELKNVD-KIKRPKETLICRS--CIETN 257
>ZFIN|ZDB-GENE-040625-139 [details] [associations]
symbol:trim63 "tripartite motif containing 63"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-040625-139 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101638
HOGENOM:HOG000231156 HOVERGEN:HBG071242 CTD:84676 KO:K10655
EMBL:BX649631 EMBL:BC071428 IPI:IPI00499588 RefSeq:NP_001002133.1
UniGene:Dr.150441 SMR:Q6IQH8 Ensembl:ENSDART00000038133
GeneID:415223 KEGG:dre:415223 eggNOG:NOG236861 InParanoid:Q6IQH8
OMA:NLCRSCA OrthoDB:EOG49KFR0 NextBio:20818890 Uniprot:Q6IQH8
Length = 345
Score = 154 (59.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 43/170 (25%), Positives = 70/170 (41%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR---ETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 19 EKQLSCPICLDMFT---KPVVILPCQHNLCRSCASELYDSKNPYHFSGGIFRCPTCRFEV 75
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQ--------------RRHIIPKCSTHNSQEL-LFC 129
+ R GV L + LV ++D+ +Q + P C H +++ ++C
Sbjct: 76 VLDRHGVYGLQRNLLVENIIDIYKQQLEKGSNALEPPLKSKETKEPMCDVHEEEKINIYC 135
Query: 130 ETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECV 179
TC T C C H + ++ + + S LL +N C+
Sbjct: 136 VTCQTPTCSMCKVFGQHKDCEVSTLKSVYEVQKSELKNSIDLLGASNSCL 185
>UNIPROTKB|E2RKF7 [details] [associations]
symbol:RNF224 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OMA:CQACVRR
GeneTree:ENSGT00510000050587 EMBL:AAEX03006733 EMBL:AAEX03006734
Ensembl:ENSCAFT00000037711 NextBio:20892611 Uniprot:E2RKF7
Length = 152
Score = 136 (52.9 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 34/96 (35%), Positives = 47/96 (48%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HT C C+ ++ A E + CP CR+ PRGGVA
Sbjct: 21 CIICYSAYDLTGHLPRRLYCGHTFCQACVRQLDAP-AHEQRWIPCPQCRQSTPTPRGGVA 79
Query: 93 ALP---PSFLVNQLLDLMSRQRRHIIPKCSTHNSQE 125
L +FL + +SR+ + PK ST +Q+
Sbjct: 80 MLDLDLAAFLAVKAEWELSREEPRVPPKGSTAITQQ 115
>RGD|1311956 [details] [associations]
symbol:Trim59 "tripartite motif-containing 59" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
RGD:1311956 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CH473976 OrthoDB:EOG4K3KX1
GeneTree:ENSGT00690000101726 CTD:286827 eggNOG:NOG284906
HOGENOM:HOG000013095 HOVERGEN:HBG060002 KO:K12028 OMA:LFFNQHI
EMBL:BC168884 IPI:IPI00762985 RefSeq:NP_001102415.1
UniGene:Rn.205621 Ensembl:ENSRNOT00000013987 GeneID:365813
KEGG:rno:365813 UCSC:RGD:1311956 NextBio:688090
Genevestigator:B5DF13 Uniprot:B5DF13
Length = 403
Score = 154 (59.3 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 44/139 (31%), Positives = 66/139 (47%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-L 75
N+ED E LTC C ++D P++LPCSHT C +CL + AS R L
Sbjct: 3 NFED--E--LTCPICYSIFDD----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ + C H Q L ++C
Sbjct: 55 KCPNCRSIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>UNIPROTKB|E1C7S4 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 EMBL:AADN02026109
IPI:IPI00578516 RefSeq:XP_415709.2 ProteinModelPortal:E1C7S4
Ensembl:ENSGALT00000001270 GeneID:417461 KEGG:gga:417461
OMA:MARKMSI NextBio:20820753 Uniprot:E1C7S4
Length = 492
Score = 155 (59.6 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C CL ++ P +L C H+ C C+ ++ + L CP+CR+ +
Sbjct: 11 EDQLLCPICLEVFK----EPLMLQCGHSYCKSCVLSLSGELDEQ---LLCPVCRKSVDC- 62
Query: 88 RGGVAALPPSFLVNQLLD-LMSRQRRHIIPK-CSTHNSQELLFCETCDTVFCLQCTGGSN 145
+A PP+ + ++++ L SR P+ C TH++ LFCE V C C N
Sbjct: 63 ----SASPPNVTLARIIEALQSRGETEPTPESCPTHDNPLSLFCEADREVICGLCGTIGN 118
Query: 146 HSSTSGDSEHTIIPFSIAIKRMSE---ILLYKANECVSK-NKVCPERKSNLRPSAHKADA 201
H +H I P S A RM E +LL + C +++ + +N A++AD
Sbjct: 119 HK------QHKITPISTAYCRMKEELSVLLTDVHRCKRNLDELFSKLINNKIRIANEADV 172
Query: 202 Y 202
+
Sbjct: 173 F 173
>UNIPROTKB|F1RMN8 [details] [associations]
symbol:TRIM3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001258
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF01436 PROSITE:PS50089
SMART:SM00184 SMART:SM00502 SMART:SM00557 Prosite:PS00518
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 OMA:CESCLQN EMBL:CU972372
Ensembl:ENSSSCT00000015976 Uniprot:F1RMN8
Length = 742
Score = 157 (60.3 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
++ FL C CL Y PK+LPC HT C CL +Q+ TL CP+CR+ +
Sbjct: 16 DKQFLVCSICLDRY----RCPKVLPCLHTFCERCLQNYIPAQSL---TLSCPVCRQTSIL 68
Query: 87 PRGGVAALPPSFLVNQLLDLMSR 109
P GV+AL +F ++ L++ M +
Sbjct: 69 PEQGVSALQNNFFISSLMEAMQQ 91
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 133 (51.9 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 36/112 (32%), Positives = 55/112 (49%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFC 129
CR I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYC 109
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 133 (51.9 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 36/112 (32%), Positives = 55/112 (49%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFC 129
CR I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYC 109
>ZFIN|ZDB-GENE-041014-342 [details] [associations]
symbol:trim54 "tripartite motif-containing 54"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-041014-342 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101638
EMBL:BX511178 EMBL:BX510372 HOGENOM:HOG000231156 HOVERGEN:HBG071242
IPI:IPI00502287 UniGene:Dr.90640 SMR:Q5RHH1
Ensembl:ENSDART00000049430 Ensembl:ENSDART00000061394
InParanoid:Q5RHH1 OMA:QMAVFLQ NextBio:20885064 Uniprot:Q5RHH1
Length = 433
Score = 152 (58.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/133 (30%), Positives = 61/133 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI----------AASQTRETG-TLR 76
E L C CL ++ +LPC H +C C + + AS T TG R
Sbjct: 21 ERQLICPICLEIFS---KPVVILPCQHNLCRKCANDVFQASNPLWQNRASTTVSTGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLM-SRQRRHIIPK-------CSTHNSQEL-L 127
CP CR ++ + R GV L + LV ++D+ S R ++PK C H +++ +
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKSESTRPLLPKTEQQQLMCDQHEEEKINI 137
Query: 128 FCETCDTVFCLQC 140
+C TC+T C C
Sbjct: 138 YCLTCETPTCSMC 150
>UNIPROTKB|G3N2A0 [details] [associations]
symbol:RNF224 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OMA:CQACVRR
GeneTree:ENSGT00510000050587 EMBL:DAAA02032407
Ensembl:ENSBTAT00000065437 Uniprot:G3N2A0
Length = 156
Score = 132 (51.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 26/62 (41%), Positives = 33/62 (53%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HTVC C+ R+A + + CP CR+ +PRGGVA
Sbjct: 23 CIVCYSAYDLAGHLPRRLYCGHTVCQACVRRLATPAPAQRW-VPCPQCRQSTPMPRGGVA 81
Query: 93 AL 94
L
Sbjct: 82 ML 83
>UNIPROTKB|F1SH50 [details] [associations]
symbol:TRIM59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00690000101726
CTD:286827 KO:K12028 OMA:LFFNQHI EMBL:CU466375
RefSeq:XP_001925596.3 RefSeq:XP_003358702.1
Ensembl:ENSSSCT00000012843 Ensembl:ENSSSCT00000033919
GeneID:100152755 KEGG:ssc:100152755 Uniprot:F1SH50
Length = 403
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 46/145 (31%), Positives = 68/145 (46%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-L 75
N+ED E LTC C +++ P++LPCSHT C +CL I AS R L
Sbjct: 3 NFED--E--LTCPICYSIFED----PRVLPCSHTFCRNCLEDILQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGDSEHTII 158
+ C C T G +H D + I
Sbjct: 115 LVCGHCLTIGQHHGHPIDDLQSAYI 139
>UNIPROTKB|G3MWZ4 [details] [associations]
symbol:RNF223 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00530000063798
CTD:401934 OMA:CRQPTAV EMBL:DAAA02043248 RefSeq:XP_002694237.1
ProteinModelPortal:G3MWZ4 Ensembl:ENSBTAT00000062989
GeneID:100301430 KEGG:bta:100301430 Uniprot:G3MWZ4
Length = 249
Score = 146 (56.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETGT--LRCPICREQITIP 87
L C C YD TPK L C+H CL CL+R+AA+Q T + G+ + CP CR+ +P
Sbjct: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGQPGSEAVPCPFCRQPTAVP 108
Query: 88 RGGVAALPPS 97
G AL S
Sbjct: 109 AAGAPALRTS 118
>UNIPROTKB|G3N137 [details] [associations]
symbol:G3N137 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101726 EMBL:DAAA02071445
Ensembl:ENSBTAT00000063393 OMA:PAFQCPT Uniprot:G3N137
Length = 160
Score = 131 (51.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C C RI S ++ E T +CP CR
Sbjct: 16 ESELTCPICLELFED----PLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQCPTCR 71
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-------CSTHNSQEL-LFCETCD 133
I++ G+ L + + ++D + +P C H ++++ ++C + D
Sbjct: 72 YVISLNHRGLDGLKRNVTLQNIIDRFHHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDD 131
Query: 134 TVFCLQC 140
+ C C
Sbjct: 132 QLICALC 138
>MGI|MGI:1914199 [details] [associations]
symbol:Trim59 "tripartite motif-containing 59" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0043124 "negative
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 MGI:MGI:1914199 Prosite:PS00518 GO:GO:0005783
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0043124 GO:GO:0004842 InterPro:IPR017907
OrthoDB:EOG4K3KX1 HSSP:Q13049 GeneTree:ENSGT00690000101726
CTD:286827 eggNOG:NOG284906 HOGENOM:HOG000013095 HOVERGEN:HBG060002
KO:K12028 OMA:LFFNQHI EMBL:AK009637 EMBL:AK012269 EMBL:AK016642
EMBL:AC122876 EMBL:BC006700 EMBL:BC025430 IPI:IPI00123590
RefSeq:NP_080139.3 UniGene:Mm.490341 ProteinModelPortal:Q922Y2
SMR:Q922Y2 STRING:Q922Y2 PhosphoSite:Q922Y2 PRIDE:Q922Y2
Ensembl:ENSMUST00000107802 GeneID:66949 KEGG:mmu:66949
InParanoid:Q922Y2 NextBio:323100 Bgee:Q922Y2 CleanEx:MM_TRIM59
Genevestigator:Q922Y2 GermOnline:ENSMUSG00000034317 Uniprot:Q922Y2
Length = 403
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL + AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I I G+ +LP +F + +++ ++ + C H Q L ++C + C
Sbjct: 58 NCRSIIEIASTGIESLPVNFALRAIIEKYQQEDHPDVVTCPEHYRQPLNVYCLLDKKLVC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GHCLTIGQHHGHPIDD 133
>UNIPROTKB|J9P8R5 [details] [associations]
symbol:TRIM59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101726 CTD:286827
KO:K12028 OMA:LFFNQHI EMBL:AAEX03017331 RefSeq:XP_545257.3
Ensembl:ENSCAFT00000045752 GeneID:488133 KEGG:cfa:488133
Uniprot:J9P8R5
Length = 404
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/139 (31%), Positives = 66/139 (47%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-L 75
N+ED E LTC C +++ P++LPCSHT C +CL + AS R L
Sbjct: 3 NFED--E--LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>UNIPROTKB|Q2KIJ4 [details] [associations]
symbol:MGC137058 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OrthoDB:EOG4K3KX1
GeneTree:ENSGT00690000101726 CTD:286827 eggNOG:NOG284906
HOGENOM:HOG000013095 HOVERGEN:HBG060002 KO:K12028 OMA:LFFNQHI
EMBL:DAAA02002417 EMBL:BC112616 IPI:IPI00709616
RefSeq:NP_001073779.1 UniGene:Bt.54145 Ensembl:ENSBTAT00000010623
GeneID:540154 KEGG:bta:540154 InParanoid:Q2KIJ4 NextBio:20878454
Uniprot:Q2KIJ4
Length = 361
Score = 149 (57.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 42/139 (30%), Positives = 65/139 (46%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT-----RETGT-L 75
N+ED E LTC C +++ P++LPCSHT C +CL + + R L
Sbjct: 3 NFED--E--LTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIPL 54
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDT 134
+CP CR I I G+ +LP +F + +++ ++ I C H Q L ++C
Sbjct: 55 KCPNCRSIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIITCPEHYRQPLNVYCLLDKK 114
Query: 135 VFCLQC-TGGSNHSSTSGD 152
+ C C T G +H D
Sbjct: 115 LVCGHCLTIGQHHGHPIDD 133
>UNIPROTKB|E1BSQ2 [details] [associations]
symbol:TRIM63 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031432
"titin binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0043161 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 EMBL:AADN02043924 IPI:IPI00574560
ProteinModelPortal:E1BSQ2 Ensembl:ENSGALT00000015210
NextBio:20828179 Uniprot:E1BSQ2
Length = 352
Score = 148 (57.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AAS---QTRET-----GTLRC 77
E L C CL M+ +LPC H +C C + I AA+ Q+R + G RC
Sbjct: 18 EKQLLCPICLEMFS---KPVVILPCQHNLCRKCANDIFQAANPYWQSRGSSIISGGRFRC 74
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFCE 130
P CR ++ + R GV L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 75 PTCRHEVLLDRHGVYGLQRNLLVENIIDIYKQEFSSRPLKKGEHPMCKEHEDERINIYCV 134
Query: 131 TCDTVFCLQC 140
TC+ C C
Sbjct: 135 TCEVPTCSMC 144
>UNIPROTKB|C9JZJ7 [details] [associations]
symbol:MID1 "Midline-1" species:9606 "Homo sapiens"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HGNC:HGNC:7095
HOGENOM:HOG000170021 EMBL:AC002349 EMBL:AC008008 EMBL:AC117406
EMBL:U96409 IPI:IPI00646829 ProteinModelPortal:C9JZJ7 SMR:C9JZJ7
STRING:C9JZJ7 Ensembl:ENST00000423614 UCSC:uc004cuc.1
ArrayExpress:C9JZJ7 Bgee:C9JZJ7 Uniprot:C9JZJ7
Length = 197
Score = 126 (49.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
IT+ + G+ L + + ++D
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIID 84
Score = 45 (20.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 118 CSTHNSQELL-FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C +Q+ + C TC+ +C +C + H + + H +I
Sbjct: 122 CDQDPAQDAVKTCVTCEVSYCDECLKAT-HPNKKPFTGHRLI 162
>ZFIN|ZDB-GENE-060929-1090 [details] [associations]
symbol:rnf183 "ring finger protein 183"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060929-1090 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:138065
OrthoDB:EOG44TP93 eggNOG:NOG285661 EMBL:BC124313 IPI:IPI00803098
RefSeq:NP_001070136.1 UniGene:Dr.80587 ProteinModelPortal:Q08CB0
STRING:Q08CB0 GeneID:767730 KEGG:dre:767730 HOGENOM:HOG000205747
InParanoid:Q08CB0 NextBio:20918116 ArrayExpress:Q08CB0
Uniprot:Q08CB0
Length = 316
Score = 146 (56.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 29/57 (50%), Positives = 32/57 (56%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
C C C +D TPKLL C HT CL CL+RI + E TL CPICRE I G
Sbjct: 107 CIVCFCNFDNVFKTPKLLSCGHTFCLECLARINVNSP-EIKTLTCPICREVTEIRHG 162
>UNIPROTKB|F1NV67 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0010332
"response to gamma radiation" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005789 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0010332 GO:GO:0004871 GO:GO:0010942
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:AADN02005382
IPI:IPI00811205 Ensembl:ENSGALT00000027478 Uniprot:F1NV67
Length = 410
Score = 148 (57.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 36/126 (28%), Positives = 59/126 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R +CP CR++
Sbjct: 7 EEDLTCPICCSLFDD----PRVLPCSHNFCRKCLEGILDGNVRNVLWRPSPFKCPTCRKE 62
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
P GV +L ++ + +++ ++ + +P C H+ Q L +FC T + C C
Sbjct: 63 T--PVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCA 120
Query: 142 GGSNHS 147
+H+
Sbjct: 121 TRGDHT 126
>UNIPROTKB|F5GZP3 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834 IPI:IPI00947059
ProteinModelPortal:F5GZP3 SMR:F5GZP3 Ensembl:ENST00000543469
ArrayExpress:F5GZP3 Bgee:F5GZP3 Uniprot:F5GZP3
Length = 323
Score = 146 (56.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I G+ +LP +F + +++ ++ I C H Q L ++C + C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GHCLTIGQHHGHPIDD 133
>UNIPROTKB|F1PXN1 [details] [associations]
symbol:RNF223 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00530000063798
OMA:CRQPTAV EMBL:AAEX03003841 Ensembl:ENSCAFT00000035485
Uniprot:F1PXN1
Length = 251
Score = 143 (55.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-TRETG--TLRCPICREQITIP 87
L C C YD TPK L C+H CL CL+R+AA+Q T G + CP CR+ +P
Sbjct: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPTGRPGGEAVPCPFCRQPTAVP 108
Query: 88 RGGVAALPPS 97
G AL S
Sbjct: 109 AAGAPALRTS 118
>UNIPROTKB|F1RVW2 [details] [associations]
symbol:RNF224 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OMA:CQACVRR
GeneTree:ENSGT00510000050587 EMBL:CU928955
Ensembl:ENSSSCT00000006435 Uniprot:F1RVW2
Length = 157
Score = 127 (49.8 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 26/62 (41%), Positives = 31/62 (50%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HT C C+ R+ A E + CP CR+ PRGGVA
Sbjct: 23 CIICYSAYDLAGHLPRRLYCGHTFCQACVRRLDAP-AHEQRWILCPQCRQSTPTPRGGVA 81
Query: 93 AL 94
L
Sbjct: 82 ML 83
>UNIPROTKB|Q8IWR1 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0043124
"negative regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 EMBL:CH471052 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0043124
InterPro:IPR017907 OrthoDB:EOG4K3KX1 GermOnline:ENSG00000068885
HSSP:Q13049 CTD:286827 eggNOG:NOG284906 HOGENOM:HOG000013095
HOVERGEN:HBG060002 KO:K12028 EMBL:AY159379 EMBL:AK291284
EMBL:BC109259 EMBL:BC109260 IPI:IPI00432462 RefSeq:NP_775107.1
UniGene:Hs.212957 ProteinModelPortal:Q8IWR1 SMR:Q8IWR1
STRING:Q8IWR1 PhosphoSite:Q8IWR1 DMDM:74714421 PRIDE:Q8IWR1
Ensembl:ENST00000309784 GeneID:286827 KEGG:hsa:286827
UCSC:uc003fdm.3 GeneCards:GC03M160153 HGNC:HGNC:30834 HPA:HPA017750
neXtProt:NX_Q8IWR1 PharmGKB:PA134899610 InParanoid:Q8IWR1
OMA:LFFNQHI PhylomeDB:Q8IWR1 GenomeRNAi:286827 NextBio:96304
ArrayExpress:Q8IWR1 Bgee:Q8IWR1 CleanEx:HS_TRIM59
Genevestigator:Q8IWR1 Uniprot:Q8IWR1
Length = 403
Score = 146 (56.5 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I G+ +LP +F + +++ ++ I C H Q L ++C + C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GHCLTIGQHHGHPIDD 133
>UNIPROTKB|J9P779 [details] [associations]
symbol:RNF182 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00530000063683 EMBL:AAEX03017553
Ensembl:ENSCAFT00000043818 OMA:HETYIPD Uniprot:J9P779
Length = 132
Score = 126 (49.4 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP N L++L R KC N ELL
Sbjct: 78 VSSLPDDN--NILVNLTCGGRGK---KCLPENPTELL 109
>UNIPROTKB|E7ERA6 [details] [associations]
symbol:RNF223 "RING finger protein 223" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL390719 EMBL:AK296576
IPI:IPI00908418 RefSeq:NP_001192181.1 UniGene:Hs.568137
ProteinModelPortal:E7ERA6 SMR:E7ERA6 PhosphoSite:E7ERA6
Ensembl:ENST00000453464 GeneID:401934 KEGG:hsa:401934
UCSC:uc021oen.1 CTD:401934 GeneCards:GC01M001009 HGNC:HGNC:40020
neXtProt:NX_E7ERA6 eggNOG:NOG257206 HOGENOM:HOG000170828
HOVERGEN:HBG085682 OMA:CRQPTAV OrthoDB:EOG44TP93 GenomeRNAi:401934
NextBio:107200 Bgee:E7ERA6 Uniprot:E7ERA6
Length = 249
Score = 140 (54.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 29/67 (43%), Positives = 36/67 (53%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT--RETG-TLRCPICREQITIP 87
L C C YD TPK L C+H CL CL+R+AA+Q R G + CP CR+ +P
Sbjct: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVP 108
Query: 88 RGGVAAL 94
G AL
Sbjct: 109 PAGAPAL 115
>UNIPROTKB|E2RD64 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 CTD:89122 KO:K11998 EMBL:AAEX03004276
RefSeq:XP_850838.1 ProteinModelPortal:E2RD64
Ensembl:ENSCAFT00000023668 GeneID:608654 KEGG:cfa:608654
OMA:WAICWSS Uniprot:E2RD64
Length = 475
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/163 (28%), Positives = 69/163 (42%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E LTC CL ++ P + C H C CL R S G+ CP CR
Sbjct: 4 EDLQED-LTCSICLDYFE----EPVSIECGHNFCRGCLHR---SWAPGGGSFPCPECRH- 54
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP--KCSTHNSQELLFCETCDTVFCLQCT 141
++ P A+L P++ + +L + R+R+ +P +C H LFCE CL C
Sbjct: 55 LSPP----ASLRPNWALARLTEKTRRRRQGPVPPGQCGRHREALRLFCEEDQRPVCLVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKV 184
H + HT+ P A + L +C K+K+
Sbjct: 111 ESQEHQA------HTMAPIDEAFGSYRDKLC--KTQCSLKDKI 145
>UNIPROTKB|K7EMG3 [details] [associations]
symbol:RNF152 "E3 ubiquitin-protein ligase RNF152"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC105094 HGNC:HGNC:26811 EMBL:AC105183 Ensembl:ENST00000591306
Uniprot:K7EMG3
Length = 114
Score = 124 (48.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/94 (38%), Positives = 41/94 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
GV LPP F V+QL D IP S H
Sbjct: 56 --GVTKLPPGFSVSQLPDDPEVLAVIAIPHTSEH 87
>MGI|MGI:2685603 [details] [associations]
symbol:Gm757 "predicted gene 757" species:10090 "Mus
musculus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 MGI:MGI:2685603 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:CQACVRR EMBL:AK146725 EMBL:BC147425
EMBL:BC147426 IPI:IPI00347726 RefSeq:NP_001028582.1
UniGene:Mm.244652 ProteinModelPortal:Q3UIW8 SMR:Q3UIW8 PRIDE:Q3UIW8
Ensembl:ENSMUST00000091318 GeneID:329360 KEGG:mmu:329360
UCSC:uc008iqu.1 eggNOG:NOG115591 GeneTree:ENSGT00510000050587
HOGENOM:HOG000133013 InParanoid:Q3UIW8 OrthoDB:EOG4T4CWQ
NextBio:398687 Genevestigator:Q3UIW8 Uniprot:Q3UIW8
Length = 156
Score = 124 (48.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/62 (38%), Positives = 30/62 (48%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HT C C+ R+ E + CP CR+ +PRGGV
Sbjct: 23 CIICYSAYDLSVHLPRRLYCGHTFCQACMQRLDMP-AHEQHWIPCPQCRQSTPVPRGGVT 81
Query: 93 AL 94
L
Sbjct: 82 ML 83
>ZFIN|ZDB-GENE-060825-49 [details] [associations]
symbol:zgc:153414 "zgc:153414" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060825-49 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063683 HOGENOM:HOG000261678 KO:K11983
OMA:CLPDNPT HOVERGEN:HBG060481 OrthoDB:EOG4ZCT5G EMBL:BX323064
EMBL:BC122279 IPI:IPI00835674 RefSeq:NP_001038816.1
UniGene:Dr.92012 Ensembl:ENSDART00000086646 GeneID:751631
KEGG:dre:751631 eggNOG:NOG330210 InParanoid:Q0P447 NextBio:20917783
Uniprot:Q0P447
Length = 248
Score = 139 (54.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/90 (32%), Positives = 41/90 (45%)
Query: 26 FNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT 85
F L C C C Y PK+L C H +C CL++I + CP CR
Sbjct: 13 FTTEELECKICYCAYSLSSRRPKVLKCCHCLCAKCLAKIHDLGESSPNAVICPFCRYITE 72
Query: 86 IPRGGVAALPPSF-LVNQLLDLMSRQRRHI 114
+PR V +LP + LV+ LL R+ ++
Sbjct: 73 LPREDVDSLPDEYNLVSALLSFQMRKSHNL 102
>UNIPROTKB|F1P5D7 [details] [associations]
symbol:RNF223 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00530000063798 OMA:CRQPTAV
EMBL:AADN02040852 IPI:IPI00571924 Ensembl:ENSGALT00000040212
Uniprot:F1P5D7
Length = 215
Score = 136 (52.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/67 (40%), Positives = 34/67 (50%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRETGTLRCPICREQITIPRGG 90
C C YD TPKLL CSH CL C++R++ L CP CR+ +IP+ G
Sbjct: 17 CSICFNTYDNTFKTPKLLQCSHVFCLECVARLSKGLPPNHPEDQLPCPFCRQLTSIPQEG 76
Query: 91 VAALPPS 97
AL S
Sbjct: 77 APALETS 83
>UNIPROTKB|C9JVS8 [details] [associations]
symbol:RNF182 "E3 ubiquitin-protein ligase RNF182"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043231 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000261678 EMBL:AL138718
HGNC:HGNC:28522 IPI:IPI00947537 ProteinModelPortal:C9JVS8
SMR:C9JVS8 STRING:C9JVS8 Ensembl:ENST00000420478
ArrayExpress:C9JVS8 Bgee:C9JVS8 Uniprot:C9JVS8
Length = 162
Score = 123 (48.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP N L++L + KC N ELL
Sbjct: 78 VSSLPDDN--NILVNLTCGGKGK---KCLPENPTELL 109
>RGD|1564535 [details] [associations]
symbol:Rnf224 "ring finger protein 224" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1564535 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:643596
OMA:CQACVRR GeneTree:ENSGT00510000050587 OrthoDB:EOG4T4CWQ
IPI:IPI00368536 RefSeq:XP_001077413.1 RefSeq:XP_345327.3
ProteinModelPortal:D3ZL60 Ensembl:ENSRNOT00000062001 GeneID:366004
KEGG:rno:366004 UCSC:RGD:1564535 NextBio:688490 Uniprot:D3ZL60
Length = 156
Score = 123 (48.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HT C C+ R+ + E + CP CR+ +PRGGV
Sbjct: 23 CIICYSAYDLSVHLPRRLYCGHTFCQACMRRLD-TPAHEQHWIPCPQCRQSTPMPRGGVT 81
Query: 93 AL 94
L
Sbjct: 82 ML 83
>UNIPROTKB|E1C2Y2 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 EMBL:AADN02048414 EMBL:AADN02048415
EMBL:AADN02048416 EMBL:AADN02048417 IPI:IPI00812439
Ensembl:ENSGALT00000025023 OMA:MMVGNND Uniprot:E1C2Y2
Length = 365
Score = 142 (55.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/132 (28%), Positives = 57/132 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-------TR------ETGT 74
E L C CL M+ +LPC H +C C S I Q TR G
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQEQASNPYLPTRGGTTVASGGR 77
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LF 128
RCP CR ++ + R GV L + LV ++D+ ++ R+ +P C H + + ++
Sbjct: 78 FRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERKCDLPMCEEHEDERINIY 137
Query: 129 CETCDTVFCLQC 140
C C+ C C
Sbjct: 138 CLNCEIPTCSLC 149
>UNIPROTKB|P0DH78 [details] [associations]
symbol:RNF224 "RING finger protein 224" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BX255925
UniGene:Hs.432442 IPI:IPI00941762 RefSeq:NP_001177157.1
UniGene:Hs.730186 ProteinModelPortal:P0DH78 SMR:P0DH78
Ensembl:ENST00000445101 GeneID:643596 KEGG:hsa:643596
UCSC:uc022bqe.1 CTD:643596 GeneCards:GC09P140122 HGNC:HGNC:41912
neXtProt:NX_P0DH78 OMA:CQACVRR NextBio:115119 Bgee:P0DH78
Uniprot:P0DH78
Length = 156
Score = 122 (48.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/62 (40%), Positives = 31/62 (50%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C C YD H P+ L C HT C C+ R+ + E + CP CR+ PRGGVA
Sbjct: 24 CIICCSAYDLSGHLPRRLYCGHTFCQACVRRLD-TPAPEQRWIPCPQCRQSTPTPRGGVA 82
Query: 93 AL 94
L
Sbjct: 83 ML 84
>WB|WBGene00015110 [details] [associations]
symbol:B0281.3 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG284906
GeneTree:ENSGT00530000064633 EMBL:FO080151 RefSeq:NP_494232.2
ProteinModelPortal:O16614 SMR:O16614 STRING:O16614 PaxDb:O16614
EnsemblMetazoa:B0281.3 GeneID:181897 KEGG:cel:CELE_B0281.3
UCSC:B0281.3 CTD:181897 WormBase:B0281.3 HOGENOM:HOG000113966
InParanoid:O16614 OMA:CGICHET NextBio:915716 Uniprot:O16614
Length = 329
Score = 140 (54.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 35/126 (27%), Positives = 60/126 (47%)
Query: 41 DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
+ G+H+P+ L C HT+C C+ ++ + +R + CP CRE +P + +L +F +
Sbjct: 16 EDGDHSPRNLKCCHTLCEGCIKKLL-NYSR----IVCPFCREPTEVPGNNIKSLHKNFSL 70
Query: 101 NQLLD--LMSRQRRHIIPKCSTH--NSQELLF----CETCDTVFCLQCTGGSNHSSTSGD 152
Q++ L+ IIPKC H N E C + D + C C H G
Sbjct: 71 IQVIKTTLVEEAEARIIPKCKAHPYNLAEFFCVNPDCSSNDKLMCRTCEDFGVHK---GH 127
Query: 153 SEHTII 158
+++ +I
Sbjct: 128 AKYLLI 133
>UNIPROTKB|H3BRJ5 [details] [associations]
symbol:H3BRJ5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR000315 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00643 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Prosite:PS00518 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC112641 EMBL:AC024221
EMBL:AC079594 ProteinModelPortal:H3BRJ5 SMR:H3BRJ5 PRIDE:H3BRJ5
Ensembl:ENST00000483754 Bgee:H3BRJ5 Uniprot:H3BRJ5
Length = 948
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQT----RETGT-LRCP 78
+F E LTC C +++ P++LPCSHT C +CL I AS R L+CP
Sbjct: 3 NFEEE-LTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 57
Query: 79 ICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFC 137
CR I G+ +LP +F + +++ ++ I C H Q L ++C + C
Sbjct: 58 NCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVC 117
Query: 138 LQC-TGGSNHSSTSGD 152
C T G +H D
Sbjct: 118 GHCLTIGQHHGHPIDD 133
>ZFIN|ZDB-GENE-070705-92 [details] [associations]
symbol:si:ch211-202f5.2 "si:ch211-202f5.2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070705-92 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG115591 GeneTree:ENSGT00510000050587
OrthoDB:EOG4T4CWQ EMBL:BX510338 IPI:IPI00854097
RefSeq:XP_001333631.1 RefSeq:XP_002662175.1 RefSeq:XP_002662202.1
UniGene:Dr.115093 Ensembl:ENSDART00000147875 GeneID:100334516
GeneID:795181 KEGG:dre:100334516 KEGG:dre:795181 HOVERGEN:HBG099151
NextBio:20932134 Uniprot:A5PMH4
Length = 187
Score = 130 (50.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ GE P+ L C HT C CL R+ + E + CP CR+ +PRGG
Sbjct: 54 LDCIVCYSAYNLGERLPRKLYCGHTFCQACLKRLD-TLINEQMWIPCPQCRQNTPVPRGG 112
Query: 91 VAAL 94
AL
Sbjct: 113 ATAL 116
>WB|WBGene00003597 [details] [associations]
symbol:nhl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/115 (33%), Positives = 51/115 (44%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRYK----QPKLLPCQHTFCYPCLESCADTLHRN---LKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH-NSQELLFCETCDT-VFCLQC 140
GV A P++ + L++ + + + + L C+ CD C C
Sbjct: 91 YDGVKAFQPNYTLTGFLEIHLQATPESAAEIEEYIHRYNLERCKICDEKADCEPC 145
>UNIPROTKB|Q03601 [details] [associations]
symbol:nhl-1 "RING finger protein nhl-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/115 (33%), Positives = 51/115 (44%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL Y PKLLPC HT C CL A + R L+CP CR + IP
Sbjct: 38 EQLLTCPICLDRYK----QPKLLPCQHTFCYPCLESCADTLHRN---LKCPECRAEHNIP 90
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH-NSQELLFCETCDT-VFCLQC 140
GV A P++ + L++ + + + + L C+ CD C C
Sbjct: 91 YDGVKAFQPNYTLTGFLEIHLQATPESAAEIEEYIHRYNLERCKICDEKADCEPC 145
>UNIPROTKB|Q969Q1 [details] [associations]
symbol:TRIM63 "E3 ubiquitin-protein ligase TRIM63"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006936 "muscle contraction" evidence=IEA]
[GO:0014732 "skeletal muscle atrophy" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0051384 "response to glucocorticoid stimulus"
evidence=IEA] [GO:0070555 "response to interleukin-1" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] [GO:0031430 "M band" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=NAS] [GO:0005874
"microtubule" evidence=NAS] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0031432
"titin binding" evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 Reactome:REACT_6900 GO:GO:0043161 GO:GO:0046872
GO:GO:0008270 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0005874 InterPro:IPR017907 GO:GO:0031432
EMBL:AL391650 InterPro:IPR017903 PROSITE:PS51262 eggNOG:NOG310224
HOGENOM:HOG000231156 HOVERGEN:HBG071242 EMBL:AJ291713 EMBL:AF353673
EMBL:AJ276484 EMBL:AF361946 EMBL:AK056942 EMBL:BC080529
IPI:IPI00000309 RefSeq:NP_115977.2 UniGene:Hs.279709 PDB:2D8U
PDB:3DDT PDBsum:2D8U PDBsum:3DDT ProteinModelPortal:Q969Q1
SMR:Q969Q1 IntAct:Q969Q1 MINT:MINT-6492114 STRING:Q969Q1
PhosphoSite:Q969Q1 DMDM:21362898 PaxDb:Q969Q1 PRIDE:Q969Q1
DNASU:84676 Ensembl:ENST00000374272 GeneID:84676 KEGG:hsa:84676
UCSC:uc001bli.1 CTD:84676 GeneCards:GC01M026377 HGNC:HGNC:16007
MIM:606131 neXtProt:NX_Q969Q1 PharmGKB:PA34431 InParanoid:Q969Q1
KO:K10655 OMA:FDTLYAI OrthoDB:EOG457571 PhylomeDB:Q969Q1
ChiTaRS:TRIM63 EvolutionaryTrace:Q969Q1 GenomeRNAi:84676
NextBio:74699 Bgee:Q969Q1 CleanEx:HS_TRIM63 Genevestigator:Q969Q1
GermOnline:ENSG00000158022 Uniprot:Q969Q1
Length = 353
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AA---------SQTRETGTLR 76
E L C CL M+ +LPC H +C C + I AA S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSMC 145
>UNIPROTKB|D6RAL3 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00967311
ProteinModelPortal:D6RAL3 SMR:D6RAL3 Ensembl:ENST00000510806
ArrayExpress:D6RAL3 Bgee:D6RAL3 Uniprot:D6RAL3
Length = 79
Score = 120 (47.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 31/75 (41%), Positives = 38/75 (50%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL D + K+LPC HT C CL I S+ LRCP CR T+ G
Sbjct: 10 LECPVCLERLDA---SAKVLPCQHTFCKRCLLGIVGSRNE----LRCPECR---TLVGSG 59
Query: 91 VAALPPSFLVNQLLD 105
V LP + L+ +LLD
Sbjct: 60 VEELPSNILLVRLLD 74
>UNIPROTKB|D6RHX5 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00966916
ProteinModelPortal:D6RHX5 SMR:D6RHX5 Ensembl:ENST00000502315
ArrayExpress:D6RHX5 Bgee:D6RHX5 Uniprot:D6RHX5
Length = 99
Score = 120 (47.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 31/75 (41%), Positives = 38/75 (50%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL D + K+LPC HT C CL I S+ LRCP CR T+ G
Sbjct: 10 LECPVCLERLDA---SAKVLPCQHTFCKRCLLGIVGSRNE----LRCPECR---TLVGSG 59
Query: 91 VAALPPSFLVNQLLD 105
V LP + L+ +LLD
Sbjct: 60 VEELPSNILLVRLLD 74
>UNIPROTKB|E2RCM9 [details] [associations]
symbol:TRIM63 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031432 "titin
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0043161 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 OMA:FDTLYAI EMBL:AAEX03001722
Ensembl:ENSCAFT00000020117 Uniprot:E2RCM9
Length = 354
Score = 139 (54.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AASQ--TRETGTL-------R 76
E L C CL M+ +LPC H +C C + I AA+ T G++ R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPFWTNRVGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEMPTCSMC 145
>UNIPROTKB|K7GKI3 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CU550675 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 Ensembl:ENSSSCT00000036376
Uniprot:K7GKI3
Length = 329
Score = 138 (53.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R G+ L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEDERINIYCL 137
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 138 NCEVPTCSLC 147
>RGD|1307609 [details] [associations]
symbol:Trim13 "tripartite motif-containing 13" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA;ISO] [GO:0010942 "positive regulation of cell death"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016239 "positive regulation of macroautophagy"
evidence=IEA;ISO] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA;ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=IEA;ISO] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 UniPathway:UPA00143 RGD:1307609 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0010332 GO:GO:0004871 GO:GO:0010942
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
CTD:10206 KO:K12003 GeneTree:ENSGT00690000101726
HOGENOM:HOG000290663 OMA:QPLNIFC HOVERGEN:HBG056536
OrthoDB:EOG46MBJP EMBL:CH474023 EMBL:BC088425 IPI:IPI00198603
RefSeq:NP_001012210.1 UniGene:Rn.83735 ProteinModelPortal:Q5M7V1
PRIDE:Q5M7V1 Ensembl:ENSRNOT00000012035 GeneID:364398
KEGG:rno:364398 UCSC:RGD:1307609 eggNOG:maNOG12208
InParanoid:Q5M7V1 NextBio:685325 Genevestigator:Q5M7V1
Uniprot:Q5M7V1
Length = 407
Score = 139 (54.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL + R + +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQEL-LFCETCDTVFCLQC- 140
+ GV +L ++ + +++ ++ + +P C H Q L +FC T + C C
Sbjct: 61 TSAT--GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKEHLGQPLNIFCVTDMQLICGVCA 118
Query: 141 TGGSN--HSSTSGDSEHT 156
T GS+ H +S + +T
Sbjct: 119 TRGSHTKHVFSSIEDAYT 136
>UNIPROTKB|I3L5M6 [details] [associations]
symbol:TRIM63 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031432 "titin binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003649 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0043161 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 OMA:FDTLYAI EMBL:FP312705
Ensembl:ENSSSCT00000028044 Uniprot:I3L5M6
Length = 356
Score = 138 (53.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---AASQ--TRETGTL------- 75
E L C CL M+ +LPC H +C C + I AA+ T +G++
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQQAANPYWTSRSGSVSMSGGRF 74
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LF 128
RCP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++
Sbjct: 75 RCPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIY 134
Query: 129 CETCDTVFCLQC 140
C TC+ C C
Sbjct: 135 CLTCEVPTCSMC 146
>UNIPROTKB|Q5JVY0 [details] [associations]
symbol:TRIM32 "E3 ubiquitin-protein ligase TRIM32"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005863 "striated muscle myosin thick
filament" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0017022 "myosin binding" evidence=IEA] [GO:0031369 "translation
initiation factor binding" evidence=IEA] [GO:0034612 "response to
tumor necrosis factor" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IEA] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=IEA]
[GO:0050769 "positive regulation of neurogenesis" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:2000147 "positive regulation of cell
motility" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0050769
GO:GO:0034612 GO:GO:0045666 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0048147 GO:GO:0004842 GO:GO:0045444
GO:GO:2000147 GO:GO:0045732 InterPro:IPR017907 EMBL:AL133284
GO:GO:0005863 UniGene:Hs.591910 HGNC:HGNC:16380 IPI:IPI00645015
SMR:Q5JVY0 IntAct:Q5JVY0 MINT:MINT-1461567 Ensembl:ENST00000411410
Uniprot:Q5JVY0
Length = 173
Score = 124 (48.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+N + E L C C+ + + PKLL C HT+C CL ++ AS G +RCP C
Sbjct: 9 LNLDALRE-VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--G-VRCPFC 64
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC-STHNSQELLFCETCDTVFCLQ 139
+ I + L + V +++D + C S FC +C V C
Sbjct: 65 SKITRIT--SLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGLVLCEP 122
Query: 140 C 140
C
Sbjct: 123 C 123
>DICTYBASE|DDB_G0286991 [details] [associations]
symbol:DDB_G0286991 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
dictyBase:DDB_G0286991 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 EMBL:AAFI02000093
RefSeq:XP_637452.1 ProteinModelPortal:Q54L05
EnsemblProtists:DDB0187224 GeneID:8625898 KEGG:ddi:DDB_G0286991
InParanoid:Q54L05 OMA:FDIETHI Uniprot:Q54L05
Length = 459
Score = 139 (54.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 27 NESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
+E F TC C +++ P +LPC+H C C+ + Q + CP CR ++ +
Sbjct: 59 SEDF-TCSICYELFE----RPIILPCNHNFCKSCIEDMVIGQKQ---IFHCPFCRTEVKL 110
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPK-CSTHNSQELLF-CETCDTVFCLQCTGGS 144
GV LP + + ++ M + PK C S+++ CETC C C S
Sbjct: 111 TEKGVDGLPVNSFLFTAVEKM-KNANAFCPKFCDNCTSKKVTRKCETCSISLCKACE--S 167
Query: 145 NHSSTSG 151
+H + +G
Sbjct: 168 SHVAKNG 174
>MGI|MGI:2447992 [details] [associations]
symbol:Trim63 "tripartite motif-containing 63" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006936
"muscle contraction" evidence=ISA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031432 "titin
binding" evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0043292 "contractile
fiber" evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
MGI:MGI:2447992 Prosite:PS00518 GO:GO:0005634 GO:GO:0031430
GO:GO:0030018 GO:GO:0043161 GO:GO:0046872 GO:GO:0008270
GO:GO:0043292 GO:GO:0006936 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
eggNOG:NOG310224 HOVERGEN:HBG071242 OrthoDB:EOG457571 EMBL:DQ229108
EMBL:AK052911 IPI:IPI00226235 IPI:IPI00660145 UniGene:Mm.331961
ProteinModelPortal:Q38HM4 SMR:Q38HM4 STRING:Q38HM4
PhosphoSite:Q38HM4 PRIDE:Q38HM4 UCSC:uc008ves.1 CleanEx:MM_TRIM63
Genevestigator:Q38HM4 GermOnline:ENSMUSG00000028834 Uniprot:Q38HM4
Length = 350
Score = 137 (53.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AA---------SQTRETGTLR 76
E L C CL M+ +LPC H +C C + I AA S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSLC 145
>RGD|619964 [details] [associations]
symbol:Trim63 "tripartite motif containing 63, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006936 "muscle
contraction" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0014732 "skeletal muscle atrophy" evidence=IEP]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0031432
"titin binding" evidence=IEA;ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0043292 "contractile fiber" evidence=IDA] [GO:0051384 "response
to glucocorticoid stimulus" evidence=IEP] [GO:0070555 "response to
interleukin-1" evidence=IEP] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 UniPathway:UPA00143 RGD:619964 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051384
GO:GO:0043292 GO:GO:0006936 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 InterPro:IPR017907 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101638 GO:GO:0014732
eggNOG:NOG310224 HOGENOM:HOG000231156 HOVERGEN:HBG071242 CTD:84676
KO:K10655 EMBL:AY059627 EMBL:BC061824 IPI:IPI00339192
RefSeq:NP_543179.1 UniGene:Rn.40636 ProteinModelPortal:Q91Z63
SMR:Q91Z63 STRING:Q91Z63 PRIDE:Q91Z63 DNASU:140939
Ensembl:ENSRNOT00000067524 GeneID:140939 KEGG:rno:140939
UCSC:RGD:619964 InParanoid:Q91Z63 NextBio:620830
ArrayExpress:Q91Z63 Genevestigator:Q91Z63
GermOnline:ENSRNOG00000016543 Uniprot:Q91Z63
Length = 351
Score = 137 (53.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AA---------SQTRETGTLR 76
E L C CL M+ +LPC H +C C + I AA S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSLC 145
>UNIPROTKB|Q91Z63 [details] [associations]
symbol:Trim63 "E3 ubiquitin-protein ligase TRIM63"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 RGD:619964 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0051384 GO:GO:0043292
GO:GO:0006936 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070555
GO:GO:0004842 InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 GO:GO:0014732 eggNOG:NOG310224
HOGENOM:HOG000231156 HOVERGEN:HBG071242 CTD:84676 KO:K10655
EMBL:AY059627 EMBL:BC061824 IPI:IPI00339192 RefSeq:NP_543179.1
UniGene:Rn.40636 ProteinModelPortal:Q91Z63 SMR:Q91Z63 STRING:Q91Z63
PRIDE:Q91Z63 DNASU:140939 Ensembl:ENSRNOT00000067524 GeneID:140939
KEGG:rno:140939 UCSC:RGD:619964 InParanoid:Q91Z63 NextBio:620830
ArrayExpress:Q91Z63 Genevestigator:Q91Z63
GermOnline:ENSRNOG00000016543 Uniprot:Q91Z63
Length = 351
Score = 137 (53.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI--AA---------SQTRETGTLR 76
E L C CL M+ +LPC H +C C + I AA S + G R
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFR 74
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LFC 129
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++C
Sbjct: 75 CPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYC 134
Query: 130 ETCDTVFCLQC 140
TC+ C C
Sbjct: 135 LTCEVPTCSLC 145
>UNIPROTKB|Q2KI94 [details] [associations]
symbol:TRIM63 "Tripartite motif-containing 63" species:9913
"Bos taurus" [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031432 "titin binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101638
eggNOG:NOG310224 HOGENOM:HOG000231156 HOVERGEN:HBG071242 CTD:84676
KO:K10655 OMA:FDTLYAI OrthoDB:EOG457571 EMBL:DAAA02006380
EMBL:DAAA02006379 EMBL:BC112721 IPI:IPI00689807
RefSeq:NP_001039760.1 UniGene:Bt.57956 SMR:Q2KI94
Ensembl:ENSBTAT00000037900 GeneID:528912 KEGG:bta:528912
InParanoid:Q2KI94 NextBio:20874922 Uniprot:Q2KI94
Length = 355
Score = 137 (53.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/132 (28%), Positives = 58/132 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---AA---------SQTRETGTL 75
E L C CL M+ +LPC H +C C + I AA S G
Sbjct: 18 EKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQQAANPYWTGRVGSAAMSGGRF 74
Query: 76 RCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ------RRHIIPKCSTHNSQEL-LF 128
RCP CR ++ + R GV L + LV ++D+ ++ ++ P C H +++ ++
Sbjct: 75 RCPSCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIY 134
Query: 129 CETCDTVFCLQC 140
C TC+ C C
Sbjct: 135 CLTCEVPTCSMC 146
>UNIPROTKB|F1MU01 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 EMBL:DAAA02038459 IPI:IPI00721612
Ensembl:ENSBTAT00000047065 Uniprot:F1MU01
Length = 413
Score = 138 (53.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R G+ L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEDERINIYCL 137
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 138 NCEVPTCSLC 147
>UNIPROTKB|I3LQP1 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CU550675 GeneTree:ENSGT00690000101638
Ensembl:ENSSSCT00000023039 Uniprot:I3LQP1
Length = 203
Score = 130 (50.8 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/132 (28%), Positives = 57/132 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII----PK---CSTHNSQEL-LF 128
CP CR ++ + R G+ L + LV ++D+ ++ + P+ C H + + ++
Sbjct: 78 CPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPLHTPAPRHSMCEEHEDERINIY 137
Query: 129 CETCDTVFCLQC 140
C C+ C C
Sbjct: 138 CLNCEVPTCSLC 149
>UNIPROTKB|I3L6F4 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CU550675 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 Ensembl:ENSSSCT00000030871
Uniprot:I3L6F4
Length = 443
Score = 138 (53.6 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R G+ L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEDERINIYCL 137
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 138 NCEVPTCSLC 147
>UNIPROTKB|C9IZ30 [details] [associations]
symbol:RNF182 "E3 ubiquitin-protein ligase RNF182"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL138718 HGNC:HGNC:28522
IPI:IPI00945038 ProteinModelPortal:C9IZ30 SMR:C9IZ30 STRING:C9IZ30
Ensembl:ENST00000423553 ArrayExpress:C9IZ30 Bgee:C9IZ30
Uniprot:C9IZ30
Length = 82
Score = 117 (46.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALP 95
V++LP
Sbjct: 78 VSSLP 82
>UNIPROTKB|Q9BYV6 [details] [associations]
symbol:TRIM55 "Tripartite motif-containing protein 55"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0004871 "signal transducer activity"
evidence=NAS] [GO:0005874 "microtubule" evidence=NAS] [GO:0042802
"identical protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005874
InterPro:IPR017907 EMBL:CH471068 InterPro:IPR017903 PROSITE:PS51262
eggNOG:NOG310224 HOVERGEN:HBG071242 OrthoDB:EOG4WQ12R EMBL:AJ291712
EMBL:AJ243488 EMBL:AJ243489 EMBL:AJ277493 EMBL:AJ431704
EMBL:AK091310 EMBL:AK091728 EMBL:BC007750 EMBL:BT007212
IPI:IPI00011473 IPI:IPI00216729 IPI:IPI00375443 IPI:IPI00375444
RefSeq:NP_149047.2 RefSeq:NP_908973.1 RefSeq:NP_908974.1
RefSeq:NP_908975.1 UniGene:Hs.85524 ProteinModelPortal:Q9BYV6
SMR:Q9BYV6 IntAct:Q9BYV6 MINT:MINT-4723378 STRING:Q9BYV6
PhosphoSite:Q9BYV6 DMDM:78099806 PaxDb:Q9BYV6 PRIDE:Q9BYV6
DNASU:84675 Ensembl:ENST00000276573 Ensembl:ENST00000315962
Ensembl:ENST00000350034 Ensembl:ENST00000353317 GeneID:84675
KEGG:hsa:84675 UCSC:uc003xvu.3 UCSC:uc003xvv.3 UCSC:uc003xvw.3
UCSC:uc003xvx.3 CTD:84675 GeneCards:GC08P067039 HGNC:HGNC:14215
HPA:HPA038793 MIM:606469 neXtProt:NX_Q9BYV6 PharmGKB:PA34432
InParanoid:Q9BYV6 KO:K10654 OMA:EIDFYRE PhylomeDB:Q9BYV6
GenomeRNAi:84675 NextBio:74689 ArrayExpress:Q9BYV6 Bgee:Q9BYV6
CleanEx:HS_TRIM55 Genevestigator:Q9BYV6 GermOnline:ENSG00000147573
Uniprot:Q9BYV6
Length = 548
Score = 139 (54.0 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 38/130 (29%), Positives = 57/130 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 137
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 138 NCEVPTCSLC 147
>WB|WBGene00021763 [details] [associations]
symbol:Y51F10.2 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FO081782 RefSeq:NP_740796.1
ProteinModelPortal:Q8WTJ8 SMR:Q8WTJ8 DIP:DIP-26335N IntAct:Q8WTJ8
MINT:MINT-1084696 STRING:Q8WTJ8 EnsemblMetazoa:Y51F10.2
GeneID:245998 KEGG:cel:CELE_Y51F10.2 UCSC:Y51F10.2 CTD:245998
WormBase:Y51F10.2 eggNOG:NOG275674 GeneTree:ENSGT00530000067894
HOGENOM:HOG000022225 InParanoid:Q8WTJ8 OMA:PLRVEMQ NextBio:951576
Uniprot:Q8WTJ8
Length = 305
Score = 135 (52.6 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCL------SRIAASQT---RETGTLRCPICRE 82
+C CL +D G+H PK+L C+HTVC C+ SRI ++ R +RCP+CR
Sbjct: 18 SCRICLEPFDEGQHLPKILQCAHTVCERCIGLLDEQSRINHNRPPIDRSFVHIRCPVCRA 77
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP-----KCS-THNSQELLFCETCDTV 135
PR + + ++ + +L+D M + H I C+ ++ ++ C TC +
Sbjct: 78 VTQTPRNYIRS---NYQLIELMDSMRGEADHNISFLACVGCNGVYHEKDTNICTTCSPI 133
>UNIPROTKB|Q58D15 [details] [associations]
symbol:TRIM54 "Tripartite motif-containing protein 54"
species:9913 "Bos taurus" [GO:0030018 "Z disc" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0007275 GO:GO:0005875 GO:GO:0030154
GO:GO:0030018 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005874 GO:GO:0007026 InterPro:IPR017907
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101638
EMBL:BT021782 EMBL:BC114171 IPI:IPI00708807 RefSeq:NP_001017951.1
UniGene:Bt.9981 ProteinModelPortal:Q58D15 SMR:Q58D15 PRIDE:Q58D15
Ensembl:ENSBTAT00000024312 GeneID:535320 KEGG:bta:535320 CTD:57159
eggNOG:NOG310224 HOGENOM:HOG000231156 HOVERGEN:HBG071242
InParanoid:Q58D15 KO:K10653 OMA:GYESMDQ OrthoDB:EOG4WQ12R
NextBio:20876697 Uniprot:Q58D15
Length = 366
Score = 136 (52.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AAS----QTRET------GTLR 76
E L C CL M+ +LPC H +C C + + AS Q+R + G R
Sbjct: 21 EKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRSSTTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQEL- 126
CP CR ++ + R GV L + LV ++D L S+ +H++ C H +++
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDEKIN 135
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
++C +C+ C C H D E +P +I ++ SE+
Sbjct: 136 IYCLSCEVPTCSLCKVFGAHK----DCEVAPLP-TIYKRQKSEL 174
>ZFIN|ZDB-GENE-060312-37 [details] [associations]
symbol:trim55b "tripartite motif-containing 55b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-060312-37
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101638 eggNOG:NOG310224
HOGENOM:HOG000231156 HOVERGEN:HBG071242 OrthoDB:EOG4WQ12R KO:K10654
EMBL:CR354424 OMA:MMVGNND EMBL:BC114283 IPI:IPI00742532
RefSeq:NP_001035071.1 UniGene:Dr.40198 SMR:Q29RB6
Ensembl:ENSDART00000080969 GeneID:664753 KEGG:dre:664753 CTD:664753
NextBio:20902331 Uniprot:Q29RB6
Length = 366
Score = 136 (52.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 39/136 (28%), Positives = 57/136 (41%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQT----------RETGT 74
D E L C CL M+ +LPC H +C C + I S G
Sbjct: 2 DSLEKQLICPICLEMFT---KPVVILPCQHNLCRKCANDIFQSSNPYLPIRGGSVTSGGR 58
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLM------SR---QRRHIIPKCSTHNSQE 125
RCP CR ++ + R GV L + LV ++D+ SR +R+ P C H ++
Sbjct: 59 FRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQEYISSRPSPERKVDQPMCEVHEDEK 118
Query: 126 L-LFCETCDTVFCLQC 140
+ ++C TC C C
Sbjct: 119 INIYCLTCGVPTCSMC 134
>WB|WBGene00022870 [details] [associations]
symbol:ZK1240.5 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00336
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000064633 EMBL:FO080152
RefSeq:NP_494237.2 ProteinModelPortal:F0IWS6 SMR:F0IWS6
EnsemblMetazoa:ZK1240.5 GeneID:191540 KEGG:cel:CELE_ZK1240.5
CTD:191540 WormBase:ZK1240.5 Uniprot:F0IWS6
Length = 289
Score = 134 (52.2 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 41 DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
+ G+H+P+ L CSHT C C + G + CP CRE IP + +L +F +
Sbjct: 16 EAGDHSPRNLKCSHTSCERCTKNLL-----NNGRIVCPFCREPTEIPGNTIKSLHKNFSL 70
Query: 101 NQLLDL----MSRQRRHIIPKCSTH--NSQELL----FCETCDTVFCLQCTGGSNHSS-- 148
Q++ + + + PKC H N E + +C + + C C NH
Sbjct: 71 IQMIQTKTTDVEKSSENCPPKCKEHPSNLAEFVCIEDYCPLKNKLICRICEHTGNHKGHT 130
Query: 149 ----TSGDSEHTIIPFSIAIKRMSEILLYKANECV 179
TS +E I + S IL YK+ V
Sbjct: 131 KELLTSRAAELRRILKRRVMHIQSNILKYKSETSV 165
>ZFIN|ZDB-GENE-040801-100 [details] [associations]
symbol:trim101 "tripartite motif-containing 101"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-040801-100
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR017903
PROSITE:PS51262 HOGENOM:HOG000231156 HOVERGEN:HBG071242 KO:K10654
EMBL:BC078201 IPI:IPI00484368 RefSeq:NP_001003581.1
UniGene:Dr.91098 ProteinModelPortal:Q6DC78 SMR:Q6DC78 GeneID:445187
KEGG:dre:445187 CTD:445187 eggNOG:NOG282793 InParanoid:Q6DC78
OrthoDB:EOG45HRZD NextBio:20831947 Uniprot:Q6DC78
Length = 429
Score = 137 (53.3 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI---AASQTRETGTLRCPICREQI 84
E L C C+ ++ +LPC H +C C + + Q G+ RCP CR ++
Sbjct: 20 EKQLICPICMDVFT---KPVVILPCLHNLCRKCANELYQPTLFQVGIEGSFRCPSCRREV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIP--------KCSTHNSQEL-LFCETCDTV 135
+ R GV L + LV ++D+ ++ P C H ++L ++C TC
Sbjct: 77 VLGRHGVFGLQRNLLVENIIDVYKQESESYRPPPMPPAEFNCKEHEDEKLNIYCITCQQP 136
Query: 136 FCLQC 140
C C
Sbjct: 137 SCSLC 141
>WB|WBGene00015114 [details] [associations]
symbol:B0281.8 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG284906
GeneTree:ENSGT00530000064633 EMBL:FO080151 PIR:T32000
RefSeq:NP_494234.1 UniGene:Cel.25602 ProteinModelPortal:O16616
SMR:O16616 EnsemblMetazoa:B0281.8 GeneID:181901
KEGG:cel:CELE_B0281.8 UCSC:B0281.8 CTD:181901 WormBase:B0281.8
HOGENOM:HOG000113967 InParanoid:O16616 NextBio:915732
Uniprot:O16616
Length = 292
Score = 134 (52.2 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 41 DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLV 100
+ G+H P+ L CSHT+C C+ ++ + G + CP CRE +P + +L +F +
Sbjct: 17 EDGDHNPRNLKCSHTLCEGCIKKLL-----KNGRVVCPFCREPTEVPVYNIKSLHKNFSL 71
Query: 101 NQLLDLMSRQRR------HIIPKCSTH--NSQELLFCET-CDTVFCLQCTGGSNHSSTSG 151
Q++ ++++ + PKC H N E E+ C + L C + G
Sbjct: 72 IQMIKIVTKTTEVEKNWDNFPPKCVEHPYNVAEFACIESNCSSKNKLMCQTCEEFGAHKG 131
Query: 152 DSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKAD 200
++ +I + ++ E + N+ + C +K+ L + K++
Sbjct: 132 HAKELLITKTDKFRKKLEFWI---NQLKLNIQNCTVKKNELEEAVVKSE 177
>UNIPROTKB|I3LDC6 [details] [associations]
symbol:LOC100524364 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101886 EMBL:FP236415
Ensembl:ENSSSCT00000025760 Uniprot:I3LDC6
Length = 140
Score = 116 (45.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 32/75 (42%), Positives = 40/75 (53%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL D T K+LPC HT C CL RI + +E LRCP CR T+
Sbjct: 10 LECPVCLEKLDV---TAKVLPCQHTFCRPCLQRIFKAH-KE---LRCPECR---TLAFCS 59
Query: 91 VAALPPSFLVNQLLD 105
+ ALP + L+ +LLD
Sbjct: 60 IEALPANLLLVRLLD 74
>UNIPROTKB|F1RTY9 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CU550675 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 OMA:EIDFYRE ProteinModelPortal:F1RTY9
Ensembl:ENSSSCT00000006812 Uniprot:F1RTY9
Length = 539
Score = 138 (53.6 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R G+ L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEDERINIYCL 137
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 138 NCEVPTCSLC 147
>UNIPROTKB|F6Y6K4 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 CTD:84675 KO:K10654 OMA:EIDFYRE
Ensembl:ENSCAFT00000011696 EMBL:AAEX03015838 RefSeq:XP_544105.2
ProteinModelPortal:F6Y6K4 GeneID:486976 KEGG:cfa:486976
Uniprot:F6Y6K4
Length = 550
Score = 138 (53.6 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R G+ L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 137
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 138 NCEVPTCSLC 147
>UNIPROTKB|Q32L60 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9913 "Bos taurus" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0097038 "perinuclear endoplasmic
reticulum" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0010332 GO:GO:0004871
GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
GO:GO:0097038 GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865
GO:GO:0016239 CTD:10206 KO:K12003 EMBL:DAAA02032918 EMBL:BC109749
IPI:IPI00690395 RefSeq:NP_001033254.1 UniGene:Bt.5644
ProteinModelPortal:Q32L60 Ensembl:ENSBTAT00000010745 GeneID:535190
KEGG:bta:535190 GeneTree:ENSGT00690000101726 HOGENOM:HOG000290663
OMA:QPLNIFC NextBio:20876654 Uniprot:Q32L60
Length = 407
Score = 136 (52.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R + +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGNVRNSLWRSSPFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
+ GV +L ++ + +++ ++ + +P C H Q L +FC T + C C
Sbjct: 61 TSAT--GVNSLQVNYSLKGIVEKYNKIKVSPKMPVCKGHLGQPLNIFCLTDMQLICGICA 118
Query: 142 GGSNHS 147
H+
Sbjct: 119 TRGEHT 124
>UNIPROTKB|F1PIL1 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:AAEX03013096
Ensembl:ENSCAFT00000006908 Uniprot:F1PIL1
Length = 455
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R + +CP CR++
Sbjct: 53 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGTVRNSLWRASPFKCPTCRKE 108
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
+ GV +L ++ + +++ ++ + +P C H Q L +FC T + C C
Sbjct: 109 TSAT--GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICA 166
Query: 142 GGSNHS 147
+H+
Sbjct: 167 TRGDHT 172
>RGD|1306943 [details] [associations]
symbol:Trim55 "tripartite motif-containing 55" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 RGD:1306943 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101638 eggNOG:NOG310224
HOGENOM:HOG000231156 HOVERGEN:HBG071242 OrthoDB:EOG4WQ12R CTD:84675
KO:K10654 OMA:EIDFYRE EMBL:BC087100 IPI:IPI00367973
RefSeq:NP_001012218.1 UniGene:Rn.76142 ProteinModelPortal:Q5PQN5
SMR:Q5PQN5 STRING:Q5PQN5 PhosphoSite:Q5PQN5 PRIDE:Q5PQN5
Ensembl:ENSRNOT00000017125 GeneID:365751 KEGG:rno:365751
UCSC:RGD:1306943 InParanoid:Q5PQN5 NextBio:687975
Genevestigator:Q5PQN5 Uniprot:Q5PQN5
Length = 545
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/130 (29%), Positives = 57/130 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL M+ +LPC H +C C S I AS TR G R
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LFCE 130
CP CR ++ + R GV L + LV ++D+ ++ ++ P C H + + ++C
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKLDQPMCEEHEEERINIYCL 137
Query: 131 TCDTVFCLQC 140
C+ C C
Sbjct: 138 NCEVPTCSLC 147
>UNIPROTKB|O60858 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016239 "positive regulation of macroautophagy" evidence=IDA]
[GO:0097038 "perinuclear endoplasmic reticulum" evidence=IDA]
[GO:0010332 "response to gamma radiation" evidence=IEP] [GO:0010942
"positive regulation of cell death" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0007165
"signal transduction" evidence=IMP] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0005789 GO:GO:0046872
EMBL:CH471075 GO:GO:0043123 GO:GO:0008270 GO:GO:0010332
GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0097038 GO:GO:0004842 GO:GO:0009653
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239 EMBL:AL137060
UniGene:Hs.436922 DNASU:10206 KEGG:hsa:10206 CTD:10206 KO:K12003
NextBio:38634 OMA:QPLNIFC EMBL:AJ224819 EMBL:AF279660 EMBL:AF220127
EMBL:AF220128 EMBL:AY191002 EMBL:AF241849 EMBL:AF241850
EMBL:AY455758 EMBL:AY764035 EMBL:AK314496 EMBL:BC003579
EMBL:BC063407 IPI:IPI00477161 IPI:IPI00607858 IPI:IPI00944555
RefSeq:NP_001007279.1 RefSeq:NP_005789.2 RefSeq:NP_434698.1
RefSeq:NP_998755.1 ProteinModelPortal:O60858 SMR:O60858
STRING:O60858 PhosphoSite:O60858 PaxDb:O60858 PRIDE:O60858
Ensembl:ENST00000298772 Ensembl:ENST00000356017
Ensembl:ENST00000378182 Ensembl:ENST00000378183
Ensembl:ENST00000420995 Ensembl:ENST00000442421
Ensembl:ENST00000457662 GeneID:10206 UCSC:uc001vdp.1
UCSC:uc001vdq.1 GeneCards:GC13P050570 HGNC:HGNC:9976 HPA:HPA000367
MIM:605661 neXtProt:NX_O60858 PharmGKB:PA162406947 eggNOG:NOG238872
HOVERGEN:HBG056536 InParanoid:O60858 OrthoDB:EOG46MBJP
PhylomeDB:O60858 GenomeRNAi:10206 Bgee:O60858 CleanEx:HS_TRIM13
Genevestigator:O60858 GermOnline:ENSG00000204977 Uniprot:O60858
Length = 407
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL I R + +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
+ G+ +L ++ + +++ ++ + +P C H Q L +FC T + C C
Sbjct: 61 TSAT--GINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICA 118
Query: 142 GGSNHS 147
H+
Sbjct: 119 TRGEHT 124
>UNIPROTKB|F1RK25 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239 CTD:10206 KO:K12003
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:GACC01000004
RefSeq:XP_003131013.1 Ensembl:ENSSSCT00000010288 GeneID:100153839
KEGG:ssc:100153839 Uniprot:F1RK25
Length = 407
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL + R + +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVRNSLWRSSPFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
+ GV +L ++ + +++ ++ + +P C H Q L +FC T + C C
Sbjct: 61 TSAT--GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICA 118
Query: 142 GGSNHS 147
+H+
Sbjct: 119 TRGDHT 124
>MGI|MGI:1913847 [details] [associations]
symbol:Trim13 "tripartite motif-containing 13" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016239 "positive regulation of macroautophagy" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:1913847 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 EMBL:CH466535
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
CTD:10206 KO:K12003 GeneTree:ENSGT00690000101726
HOGENOM:HOG000290663 OMA:QPLNIFC eggNOG:NOG238872
HOVERGEN:HBG056536 OrthoDB:EOG46MBJP EMBL:AY033605 EMBL:AK013959
EMBL:AK017850 EMBL:BC138576 EMBL:BC145915 EMBL:AF220129
EMBL:AF302839 IPI:IPI00111312 RefSeq:NP_001157692.1
RefSeq:NP_075722.1 UniGene:Mm.23959 ProteinModelPortal:Q9CYB0
SMR:Q9CYB0 STRING:Q9CYB0 PhosphoSite:Q9CYB0 PRIDE:Q9CYB0
Ensembl:ENSMUST00000039562 Ensembl:ENSMUST00000165015 GeneID:66597
KEGG:mmu:66597 InParanoid:Q9CYB0 NextBio:322120 Bgee:Q9CYB0
CleanEx:MM_TRIM13 Genevestigator:Q9CYB0
GermOnline:ENSMUSG00000035235 Uniprot:Q9CYB0
Length = 407
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRET----GTLRCPICREQ 83
E LTC C ++D P++LPCSH C CL + R + +CP CR++
Sbjct: 5 EEDLTCPICCSLFDD----PRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE 60
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPKCSTHNSQEL-LFCETCDTVFCLQCT 141
+ GV +L ++ + +++ ++ + +P C H Q L +FC T + C C
Sbjct: 61 TSAT--GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCVTDMQLICGICA 118
Query: 142 GGSNHS 147
H+
Sbjct: 119 TRGEHT 124
>UNIPROTKB|Q9BYV2 [details] [associations]
symbol:TRIM54 "Tripartite motif-containing protein 54"
species:9606 "Homo sapiens" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=NAS] [GO:0005874 "microtubule" evidence=NAS]
[GO:0007165 "signal transduction" evidence=NAS] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=NAS] [GO:0007017
"microtubule-based process" evidence=NAS] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0007275
GO:GO:0005875 EMBL:CH471053 GO:GO:0030154 GO:GO:0030018
GO:GO:0046872 GO:GO:0008270 GO:GO:0004871 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005874 GO:GO:0007017 GO:GO:0007026
InterPro:IPR017907 EMBL:AC013413 InterPro:IPR017903 PROSITE:PS51262
CTD:57159 eggNOG:NOG310224 HOGENOM:HOG000231156 HOVERGEN:HBG071242
KO:K10653 OMA:GYESMDQ EMBL:AJ291714 EMBL:BC141807 IPI:IPI00000182
IPI:IPI00376605 RefSeq:NP_115935.3 RefSeq:NP_912730.2
UniGene:Hs.516036 PDB:3Q1D PDBsum:3Q1D ProteinModelPortal:Q9BYV2
SMR:Q9BYV2 IntAct:Q9BYV2 STRING:Q9BYV2 PhosphoSite:Q9BYV2
DMDM:209572715 PaxDb:Q9BYV2 PRIDE:Q9BYV2 Ensembl:ENST00000296098
Ensembl:ENST00000380075 GeneID:57159 KEGG:hsa:57159 UCSC:uc002rjn.3
UCSC:uc002rjo.3 GeneCards:GC02P027506 HGNC:HGNC:16008 HPA:HPA019690
MIM:606474 neXtProt:NX_Q9BYV2 PharmGKB:PA34434 ChiTaRS:TRIM54
EvolutionaryTrace:Q9BYV2 GenomeRNAi:57159 NextBio:63157 Bgee:Q9BYV2
CleanEx:HS_TRIM54 Genevestigator:Q9BYV2 GermOnline:ENSG00000138100
Uniprot:Q9BYV2
Length = 358
Score = 134 (52.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AAS----QTRET------GTLR 76
E L C CL M+ +LPC H +C C + + AS Q+R + G R
Sbjct: 21 EKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQEL- 126
CP CR ++ + R GV L + LV ++D L S+ +H++ C H +++
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEEKIN 135
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
++C +C+ C C H D E +P +I ++ SE+
Sbjct: 136 IYCLSCEVPTCSLCKVFGAHK----DCEVAPLP-TIYKRQKSEL 174
>RGD|1306453 [details] [associations]
symbol:Trim54 "tripartite motif-containing 54" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA;ISO] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1306453 Prosite:PS00518
GO:GO:0007275 GO:GO:0030154 GO:GO:0030018 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005874
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262 CTD:57159
HOVERGEN:HBG071242 KO:K10653 EMBL:BC083706 IPI:IPI00365581
RefSeq:NP_001013235.1 UniGene:Rn.6303 ProteinModelPortal:Q5XIH6
SMR:Q5XIH6 GeneID:362708 KEGG:rno:362708 NextBio:680952
Genevestigator:Q5XIH6 Uniprot:Q5XIH6
Length = 364
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AAS----QTRET------GTLR 76
E L C CL M+ +LPC H +C C + + AS Q+R + G R
Sbjct: 21 EKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQEL- 126
CP CR ++ + R GV L + LV ++D L S+ +H++ C H +++
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDEKIN 135
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
++C +C+ C C H D E +P +I ++ SE+
Sbjct: 136 IYCLSCEVPTCSLCKVFGAHK----DCEVAPLP-TIYKRQKSEL 174
>UNIPROTKB|Q5XIH6 [details] [associations]
symbol:Trim54 "Tripartite motif-containing protein 54"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1306453 Prosite:PS00518 GO:GO:0007275 GO:GO:0030154
GO:GO:0030018 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005874 InterPro:IPR017907
InterPro:IPR017903 PROSITE:PS51262 CTD:57159 HOVERGEN:HBG071242
KO:K10653 EMBL:BC083706 IPI:IPI00365581 RefSeq:NP_001013235.1
UniGene:Rn.6303 ProteinModelPortal:Q5XIH6 SMR:Q5XIH6 GeneID:362708
KEGG:rno:362708 NextBio:680952 Genevestigator:Q5XIH6 Uniprot:Q5XIH6
Length = 364
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AAS----QTRET------GTLR 76
E L C CL M+ +LPC H +C C + + AS Q+R + G R
Sbjct: 21 EKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQEL- 126
CP CR ++ + R GV L + LV ++D L S+ +H++ C H +++
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEDEKIN 135
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
++C +C+ C C H D E +P +I ++ SE+
Sbjct: 136 IYCLSCEVPTCSLCKVFGAHK----DCEVAPLP-TIYKRQKSEL 174
>UNIPROTKB|E2RL94 [details] [associations]
symbol:TRIM54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005875 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0007026 InterPro:IPR017907
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101638
OMA:GYESMDQ EMBL:AAEX03010804 Ensembl:ENSCAFT00000007815
Uniprot:E2RL94
Length = 366
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AAS----QTRET------GTLR 76
E L C CL M+ +LPC H +C C + + AS Q+R + G R
Sbjct: 21 EKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLD---------LMSRQRRHIIPKCSTHNSQEL- 126
CP CR ++ + R GV L + LV ++D L S+ +H++ C H +++
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLM--CEEHEEEKIN 135
Query: 127 LFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
++C +C+ C C H D E +P +I ++ SE+
Sbjct: 136 IYCLSCEVPTCSLCKVFGAHK----DCEVAPLP-TIYKRQKSEL 174
>UNIPROTKB|Q0VCP5 [details] [associations]
symbol:TRIM32 "Tripartite motif-containing 32" species:9913
"Bos taurus" [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050769 "positive
regulation of neurogenesis" evidence=IEA] [GO:0048147 "negative
regulation of fibroblast proliferation" evidence=IEA] [GO:0045862
"positive regulation of proteolysis" evidence=IEA] [GO:0045787
"positive regulation of cell cycle" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0043621 "protein self-association" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034612 "response to tumor necrosis
factor" evidence=IEA] [GO:0031369 "translation initiation factor
binding" evidence=IEA] [GO:0030335 "positive regulation of cell
migration" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0005863 "striated
muscle myosin thick filament" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0043066 GO:GO:0030307 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0003723
GO:GO:0050769 GO:GO:0034612 GO:GO:0030335 GO:GO:0045666
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048147
GO:GO:0004842 GO:GO:0045862 GO:GO:0045444 GO:GO:0045732
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GO:GO:0042787 GO:GO:0045787 GeneTree:ENSGT00550000074377
GO:GO:0005863 CTD:22954 eggNOG:NOG269289 HOGENOM:HOG000120114
HOVERGEN:HBG060344 KO:K10607 OMA:RLPRQFC OrthoDB:EOG4QZ7KF
EMBL:DAAA02024639 EMBL:BC120073 IPI:IPI00694077
RefSeq:NP_001069292.1 UniGene:Bt.62175 SMR:Q0VCP5 STRING:Q0VCP5
Ensembl:ENSBTAT00000022801 GeneID:521975 KEGG:bta:521975
InParanoid:Q0VCP5 NextBio:20873414 Uniprot:Q0VCP5
Length = 653
Score = 133 (51.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/121 (30%), Positives = 54/121 (44%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+N + E L C CL + + PKLL C HT+C CL ++ AS G +RCP C
Sbjct: 9 LNLDALRE-VLECPICLESFTEEQLRPKLLHCGHTICCRCLEKLLASSIN--G-VRCPFC 64
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC-STHNSQELLFCETCDTVFCLQ 139
+IT+ +A L + V +++D + C S FC +C V C
Sbjct: 65 -SKITLITS-LAQLTDNLTVLKIIDKTGLSEAVGLLMCRSCGRRLPRQFCRSCGVVVCEP 122
Query: 140 C 140
C
Sbjct: 123 C 123
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 221 SPLSLPDSSHALLITRRAYVRRRGAHTQTPPLFS 254
SP S A I + ++R+ GA TP +F+
Sbjct: 339 SPAKQRGSDPATNIQQCLFLRKMGAKGSTPGMFN 372
Score = 41 (19.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 183 KVCPERKSNLRPSAHKADA-YVRRRGAHTQTPPLFSHGLSPLSLPDSSHALLITRRAY 239
+ P ++ P+ + ++R+ GA TP +F+ +S L + L+ R Y
Sbjct: 337 RASPAKQRGSDPATNIQQCLFLRKMGAKGSTPGMFNLPVS-LYVTSQGEVLVADRGNY 393
>UNIPROTKB|E2R3D4 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
Ensembl:ENSCAFT00000011696 Uniprot:E2R3D4
Length = 552
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-------TR------ETGT 74
E L C CL M+ +LPC H +C C S I Q TR G
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQEQASNPYLPTRGGTTVASGGR 77
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-LF 128
RCP CR ++ + R G+ L + LV ++D+ ++ ++ P C H + + ++
Sbjct: 78 FRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIY 137
Query: 129 CETCDTVFCLQC 140
C C+ C C
Sbjct: 138 CLNCEVPTCSLC 149
>ZFIN|ZDB-GENE-110407-9 [details] [associations]
symbol:si:ch1073-324l1.1 "si:ch1073-324l1.1"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-110407-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU861903 IPI:IPI00902226 Ensembl:ENSDART00000149093
Uniprot:F8W3P8
Length = 452
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/173 (25%), Positives = 68/173 (39%)
Query: 45 HTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLL 104
HTP +L C+H+ C CL + R T CP+CR R LP + + L
Sbjct: 19 HTPVILSCTHSFCKECLQQF----WRSKNTQECPVCRR-----RSSKKDLPVNLALKNLC 69
Query: 105 D--LMSRQRRHIIPK---CSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIP 159
+ L R R CS H+ + LFC CL C H HT P
Sbjct: 70 ESFLKERNERRSSGSEEICSLHSEKLKLFCLEDKQPVCLVCRDSEKHLG------HTFRP 123
Query: 160 FS-IAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRRRGAHTQ 211
S +A + M E+ N + + + N++ K+ +++ + HT+
Sbjct: 124 LSEMAAENMEEL-----NTALKSLQEKLKHNENIKEEFEKSVQHIKAQAEHTE 171
>MGI|MGI:1889623 [details] [associations]
symbol:Trim54 "tripartite motif-containing 54" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:1889623
Prosite:PS00518 GO:GO:0007275 GO:GO:0005875 GO:GO:0030154
GO:GO:0030018 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0008017 GO:GO:0005874 GO:GO:0007026
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 CTD:57159 eggNOG:NOG310224
HOGENOM:HOG000231156 HOVERGEN:HBG071242 KO:K10653 OMA:GYESMDQ
OrthoDB:EOG4WQ12R EMBL:AF294790 IPI:IPI00319154 RefSeq:NP_067422.1
UniGene:Mm.143796 UniGene:Mm.402047 ProteinModelPortal:Q9ERP3
SMR:Q9ERP3 STRING:Q9ERP3 PhosphoSite:Q9ERP3 PaxDb:Q9ERP3
PRIDE:Q9ERP3 Ensembl:ENSMUST00000013771 GeneID:58522 KEGG:mmu:58522
UCSC:uc008wxd.2 InParanoid:Q9ERP3 NextBio:314338 Bgee:Q9ERP3
CleanEx:MM_TRIM54 Genevestigator:Q9ERP3
GermOnline:ENSMUSG00000062077 Uniprot:Q9ERP3
Length = 366
Score = 132 (51.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 44/162 (27%), Positives = 73/162 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AAS----QTRET------GTLR 76
E L C CL M+ +LPC H +C C + + AS Q+R + G R
Sbjct: 21 EKQLICPICLEMFS---KPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFR 77
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIPK------CSTHNSQEL-LF 128
CP CR ++ + R GV L + LV ++D+ ++ R + K C H +++ ++
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKAEQHLMCEEHEDEKINIY 137
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
C +C+ C C H D E +P +I ++ SE+
Sbjct: 138 CLSCEVPTCSLCKVFGAHK----DCEVAPLP-TIYKRQKSEL 174
>UNIPROTKB|D6RBN4 [details] [associations]
symbol:TRIM23 "E3 ubiquitin-protein ligase TRIM23"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HGNC:HGNC:660 EMBL:AC008560
IPI:IPI00965267 ProteinModelPortal:D6RBN4 SMR:D6RBN4
Ensembl:ENST00000505205 ArrayExpress:D6RBN4 Bgee:D6RBN4
Uniprot:D6RBN4
Length = 126
Score = 112 (44.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLD 105
GV L +F + +LL+
Sbjct: 85 GVWGLKKNFALLELLE 100
>MGI|MGI:3645218 [details] [associations]
symbol:Trim43a "tripartite motif-containing 43A"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
MGI:MGI:3645218 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 eggNOG:NOG278898
KO:K12019 EMBL:AK145647 EMBL:AK166678 EMBL:AC163666 EMBL:BC141236
IPI:IPI00605905 RefSeq:NP_001030078.1 UniGene:Mm.304302
ProteinModelPortal:Q3TL54 SMR:Q3TL54 PhosphoSite:Q3TL54
PRIDE:Q3TL54 Ensembl:ENSMUST00000164661 GeneID:547109
KEGG:mmu:547109 CTD:547109 GeneTree:ENSGT00670000097491
HOVERGEN:HBG108727 InParanoid:Q3TL54 OMA:SFIWRYL OrthoDB:EOG4ZPDV5
NextBio:414111 Bgee:Q3TL54 Genevestigator:Q3TL54 Uniprot:Q3TL54
Length = 445
Score = 133 (51.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 52/202 (25%), Positives = 83/202 (41%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N +D E LTC C ++ P L C H C CL SQ CP+C
Sbjct: 5 NLQDPQEETLTCSICQSIF----MNPVYLRCGHKFCEACL---LLSQEDIKFPAYCPMCM 57
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMS--RQRRHIIPKCSTHNSQELLFCETCDTVFCLQ 139
+ +L + + LM + H KC TH +++++FC+ + C
Sbjct: 58 QPFNQEYINDISLKKQVSIVRKKRLMKYLNSKEH---KCVTHKAKKMIFCDKSKILLCHL 114
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIAIK-RMSEIL-----LYKANECVSKNKVCPERKSNLR 193
C+ HS HT +A++ +M E+L L++ + + +N V ER++ L
Sbjct: 115 CSDSQEHSG------HTHCSIDVAVQEKMEELLKHMDSLWRRLK-IQQNYVEIERRTTLW 167
Query: 194 PSAHKADAYVRRRGAHTQTPPL 215
+ K V +R Q PPL
Sbjct: 168 WLSVKLREEVIKRVYGKQCPPL 189
>UNIPROTKB|E2RKK7 [details] [associations]
symbol:TRIM32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050769 "positive
regulation of neurogenesis" evidence=IEA] [GO:0048147 "negative
regulation of fibroblast proliferation" evidence=IEA] [GO:0045862
"positive regulation of proteolysis" evidence=IEA] [GO:0045787
"positive regulation of cell cycle" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0043621 "protein self-association" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034612 "response to tumor necrosis
factor" evidence=IEA] [GO:0031369 "translation initiation factor
binding" evidence=IEA] [GO:0030335 "positive regulation of cell
migration" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0005863 "striated
muscle myosin thick filament" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0043066 GO:GO:0030307 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0003723
GO:GO:0050769 GO:GO:0034612 GO:GO:0030335 GO:GO:0045666
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048147
GO:GO:0004842 GO:GO:0045862 GO:GO:0045444 GO:GO:0045732
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GO:GO:0042787 GO:GO:0045787 GeneTree:ENSGT00550000074377
GO:GO:0005863 OMA:RLPRQFC EMBL:AAEX03008125
Ensembl:ENSCAFT00000005652 Uniprot:E2RKK7
Length = 653
Score = 125 (49.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+N + E L C C+ + + PKLL C HT+C CL ++ AS G +RCP C
Sbjct: 9 LNLDALRE-VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--G-VRCPFC 64
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC-STHNSQELLFCETCDTVFCLQ 139
+ I + L + V +++D + C S FC +C V C
Sbjct: 65 SKITRIT--SLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGVVLCEP 122
Query: 140 C 140
C
Sbjct: 123 C 123
Score = 50 (22.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 177 ECVSKNKVCPERKSNLRPSAHKADA-YVRRRGAHTQTPPLFSHGLSPLSLPDSSHALLIT 235
E + + P ++ P+A+ ++++ GA TP +F+ +S L + L+
Sbjct: 331 EVAASPRASPAKQRGAEPAANMQQCLFLKKMGAKGSTPGMFNLPVS-LYVTSQGEVLVAD 389
Query: 236 RRAY 239
R Y
Sbjct: 390 RGNY 393
>WB|WBGene00022873 [details] [associations]
symbol:ZK1240.9 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00530000064633
EMBL:FO080152 HOGENOM:HOG000113967 eggNOG:NOG275674
RefSeq:NP_494238.2 UniGene:Cel.13709 ProteinModelPortal:Q95X87
SMR:Q95X87 DIP:DIP-26468N IntAct:Q95X87 MINT:MINT-1064113
PaxDb:Q95X87 EnsemblMetazoa:ZK1240.9 GeneID:173587
KEGG:cel:CELE_ZK1240.9 UCSC:ZK1240.9 CTD:173587 WormBase:ZK1240.9
InParanoid:Q95X87 NextBio:880283 Uniprot:Q95X87
Length = 216
Score = 126 (49.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 35/120 (29%), Positives = 52/120 (43%)
Query: 29 SFLTCGTCLCMYDG--GEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI 86
SFL C C Y +H PK+L C H+VC +C +++ + + CP CRE I
Sbjct: 2 SFLQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNCATQLITALL-----IICPFCRETTEI 56
Query: 87 PRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH--NSQELLF----CETCDTVFCLQC 140
G L +F + Q + +M PKC H N E + C + + + C C
Sbjct: 57 SDGDDQKLQKNFALVQAIQVMKADSP---PKCEEHPYNLAEFVCVKPRCSSSNKLMCKTC 113
>ZFIN|ZDB-GENE-030131-6288 [details] [associations]
symbol:sh3rf1 "SH3 domain containing ring finger
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0030027
"lamellipodium" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] Pfam:PF00018 InterPro:IPR001841
InterPro:IPR001452 PRINTS:PR00452 PROSITE:PS50002 PROSITE:PS50089
SMART:SM00184 SMART:SM00326 Prosite:PS00518
ZFIN:ZDB-GENE-030131-6288 GO:GO:0046872 GO:GO:0008270
InterPro:IPR000108 PRINTS:PR00499 SUPFAM:SSF50044 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BX255904
GeneTree:ENSGT00690000101886 CTD:57630 eggNOG:NOG314495
HOGENOM:HOG000045564 HOVERGEN:HBG069552 KO:K12171 OMA:IQTSPQA
EMBL:BC163246 IPI:IPI00760157 RefSeq:NP_001038952.2
UniGene:Dr.80695 Ensembl:ENSDART00000050559 GeneID:556523
KEGG:dre:556523 NextBio:20881527 Uniprot:B3DIT8
Length = 880
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 36/83 (43%), Positives = 43/83 (51%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL D T K+LPC HT C CL I S+ G LRCP CR T+ G
Sbjct: 23 LECPVCLERLDA---TAKVLPCQHTFCRRCLLGIVGSR----GELRCPECR---TLVESG 72
Query: 91 VAALPPSFLVNQLLD-LMSRQRR 112
V LP + L+ +LLD + R RR
Sbjct: 73 VDELPSNILLVRLLDGIKQRPRR 95
>UNIPROTKB|C9J453 [details] [associations]
symbol:MID1 "Midline-1" species:9606 "Homo sapiens"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060
SMART:SM00184 SMART:SM00336 SMART:SM00502 Prosite:PS00518
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 SUPFAM:SSF49265
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
HGNC:HGNC:7095 HOGENOM:HOG000049193 EMBL:AC002349 EMBL:AC008008
EMBL:AC117406 EMBL:U96409 IPI:IPI00647754 ProteinModelPortal:C9J453
SMR:C9J453 STRING:C9J453 Ensembl:ENST00000413894 UCSC:uc004cub.1
ArrayExpress:C9J453 Bgee:C9J453 Uniprot:C9J453
Length = 483
Score = 126 (49.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
IT+ + G+ L + + ++D
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIID 84
Score = 45 (20.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 118 CSTHNSQELL-FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C +Q+ + C TC+ +C +C + H + + H +I
Sbjct: 122 CDQDPAQDAVKTCVTCEVSYCDECLKAT-HPNKKPFTGHRLI 162
Score = 44 (20.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQC 140
C H +++ ++C T D + C C
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALC 198
>FB|FBgn0051721 [details] [associations]
symbol:Trim9 "Trim9" species:7227 "Drosophila melanogaster"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016199 "axon midline choice point recognition" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0038007
"netrin-activated signaling pathway" evidence=IGI;IPI] [GO:0007409
"axonogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003877 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50119
PROSITE:PS50853 SMART:SM00060 SMART:SM00184 SMART:SM00336
SMART:SM00502 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
GO:GO:0046872 SUPFAM:SSF49265 GO:GO:0008270 GO:GO:0016199
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR001870 PROSITE:PS50188 GO:GO:0038007
InterPro:IPR017903 PROSITE:PS51262 HSSP:P29590
GeneTree:ENSGT00690000101726 eggNOG:NOG260378 KO:K10649 CTD:114088
ChiTaRS:TRIM9 EMBL:BT003527 EMBL:AY251387 RefSeq:NP_723600.2
UniGene:Dm.33833 SMR:Q86P21 IntAct:Q86P21 MINT:MINT-332175
STRING:Q86P21 EnsemblMetazoa:FBtr0080096 GeneID:34453
KEGG:dme:Dmel_CG31721 UCSC:CG31721-RA FlyBase:FBgn0051721
InParanoid:Q86P21 OrthoDB:EOG4BZKHQ GenomeRNAi:34453 NextBio:788573
Uniprot:Q86P21
Length = 729
Score = 109 (43.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 41/156 (26%), Positives = 63/156 (40%)
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDT 134
L CP+CR+ + GGV LP + ++D + C T L CE C+
Sbjct: 160 LTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDRFCAREALRCQMCETDPKVASLICEQCEI 219
Query: 135 VFCLQCTGGSNHSSTSGDSEHTII-PFSIAIKRMSEILLYK---ANECVS-KNKVCPERK 189
+C C H + ++HT++ P A +R S ++ + C+S K C
Sbjct: 220 RYCDACRE-LTHPARGPLAKHTLVKPRGAAQQRESVCGEHEETLSQYCLSCKAPACGLCI 278
Query: 190 SNLRPSAHKADAY-VRRRGAHTQTPPLFSHGLSPLS 224
LR AH + V + T+ SH L LS
Sbjct: 279 GELRHQAHDVQSINVTCKAQKTE----LSHNLQQLS 310
Score = 69 (29.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHC 60
E L C TC +Y P LLPC H +CL C
Sbjct: 2 EDELRCPTCKQLYAN----PVLLPCFHALCLGC 30
>UNIPROTKB|J9NXR2 [details] [associations]
symbol:RNF152 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 CTD:220441 KO:K15705
GeneTree:ENSGT00530000063683 OMA:PWCRGIT EMBL:AAEX03000095
RefSeq:XP_003432547.1 ProteinModelPortal:J9NXR2
Ensembl:ENSCAFT00000049126 GeneID:609935 KEGG:cfa:609935
Uniprot:J9NXR2
Length = 203
Score = 124 (48.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 35/94 (37%), Positives = 41/94 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
G+ LPP F V+QL D IP S H
Sbjct: 56 --GITKLPPGFSVSQLPDDPEVLAVIAIPHASEH 87
>UNIPROTKB|Q8N8N0 [details] [associations]
symbol:RNF152 "E3 ubiquitin-protein ligase RNF152"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005764 "lysosome"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
GO:GO:0016021 GO:GO:0006915 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070936 CTD:220441 HOVERGEN:HBG054053 KO:K15705
HOGENOM:HOG000120123 OMA:PWCRGIT eggNOG:NOG307328 OrthoDB:EOG4G7C09
EMBL:AK096495 EMBL:AK122758 EMBL:AC105094 EMBL:BC094004
EMBL:BC111956 IPI:IPI00167511 RefSeq:NP_775828.1 UniGene:Hs.667457
ProteinModelPortal:Q8N8N0 SMR:Q8N8N0 IntAct:Q8N8N0 STRING:Q8N8N0
PhosphoSite:Q8N8N0 DMDM:41017760 PRIDE:Q8N8N0
Ensembl:ENST00000312828 GeneID:220441 KEGG:hsa:220441
UCSC:uc002lih.1 GeneCards:GC18M059475 HGNC:HGNC:26811
neXtProt:NX_Q8N8N0 PharmGKB:PA134984811 InParanoid:Q8N8N0
PhylomeDB:Q8N8N0 GenomeRNAi:220441 NextBio:91070 Bgee:Q8N8N0
CleanEx:HS_RNF152 Genevestigator:Q8N8N0 GermOnline:ENSG00000176641
Uniprot:Q8N8N0
Length = 203
Score = 124 (48.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 36/94 (38%), Positives = 41/94 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
GV LPP F V+QL D IP S H
Sbjct: 56 --GVTKLPPGFSVSQLPDDPEVLAVIAIPHTSEH 87
>UNIPROTKB|F1SMU5 [details] [associations]
symbol:RNF152 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 GO:GO:0046872
GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070936 GeneTree:ENSGT00530000063683
OMA:PWCRGIT EMBL:CU582901 Ensembl:ENSSSCT00000005408 Uniprot:F1SMU5
Length = 203
Score = 124 (48.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 35/94 (37%), Positives = 41/94 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
G+ LPP F V+QL D IP S H
Sbjct: 56 --GITKLPPGFSVSQLPDDPEVLAVIAIPHASEH 87
>UNIPROTKB|Q68EV7 [details] [associations]
symbol:rnf152-b "E3 ubiquitin-protein ligase rnf152-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005764 "lysosome" evidence=ISS]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0016021
GO:GO:0005765 GO:GO:0046872 GO:GO:0008270 GO:GO:0005764
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070936
HOVERGEN:HBG054053 EMBL:BC080093 RefSeq:NP_001087549.1
UniGene:Xl.48679 ProteinModelPortal:Q68EV7 GeneID:447373
KEGG:xla:447373 KO:K15705 Uniprot:Q68EV7
Length = 203
Score = 124 (48.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 32/78 (41%), Positives = 38/78 (48%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ ASQ LRCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRASQK----DLRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLD 105
GV LPP + V++L D
Sbjct: 56 --GVTKLPPGYSVSELPD 71
>UNIPROTKB|E1BRM9 [details] [associations]
symbol:MID1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003649
InterPro:IPR003877 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00622
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853
SMART:SM00060 SMART:SM00184 SMART:SM00336 SMART:SM00502
Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
SUPFAM:SSF49265 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005881
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0032874 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101726 OMA:TDEQLIC
EMBL:AADN02071202 EMBL:AADN02071203 EMBL:AADN02071204
EMBL:AADN02071205 EMBL:AADN02071206 EMBL:AADN02071207
EMBL:AADN02071208 EMBL:AADN02071209 EMBL:AADN02071210
EMBL:AADN02071211 EMBL:AADN02071212 EMBL:AADN02071213
EMBL:AADN02071214 EMBL:AADN02071215 EMBL:AADN02071216
EMBL:AADN02071217 EMBL:AADN02071218 EMBL:AADN02071219
EMBL:AADN02071220 EMBL:AADN02071221 EMBL:AADN02071222
IPI:IPI00600259 Ensembl:ENSGALT00000026796 ArrayExpress:E1BRM9
Uniprot:E1BRM9
Length = 668
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A+++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F +C+ V
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDSNSMSSCEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>UNIPROTKB|E1BCL8 [details] [associations]
symbol:TRIM55 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101638 OMA:EIDFYRE EMBL:DAAA02038459
IPI:IPI00840948 Ensembl:ENSBTAT00000027975 Uniprot:E1BCL8
Length = 548
Score = 132 (51.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/133 (27%), Positives = 57/133 (42%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI----AASQ----TR------ETG 73
E L C CL M+ +LPC H +C C S I AS TR G
Sbjct: 21 EKQLICPICLEMFT---KPVVILPCQHNLCRKCASDIFQQEQASNPYLPTRGGTTVASGG 77
Query: 74 TLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQ-----RRHIIPKCSTHNSQEL-L 127
RCP CR ++ + R G+ L + LV ++D+ ++ ++ P C H + + +
Sbjct: 78 RFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEDERINI 137
Query: 128 FCETCDTVFCLQC 140
+C C+ C C
Sbjct: 138 YCLNCEVPTCSLC 150
>MGI|MGI:2443787 [details] [associations]
symbol:Rnf152 "ring finger protein 152" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005764 "lysosome" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:2443787 Pfam:PF00097 Prosite:PS00518
GO:GO:0016021 GO:GO:0006915 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070936 CTD:220441 HOVERGEN:HBG054053 KO:K15705
GeneTree:ENSGT00530000063683 HOGENOM:HOG000120123 OMA:PWCRGIT
eggNOG:NOG307328 OrthoDB:EOG4G7C09 EMBL:AK035832 EMBL:AK044638
EMBL:BC118961 IPI:IPI00221469 RefSeq:NP_001153840.1
RefSeq:NP_848894.1 UniGene:Mm.321153 UniGene:Mm.389162
ProteinModelPortal:Q8BG47 SMR:Q8BG47 PhosphoSite:Q8BG47
PRIDE:Q8BG47 Ensembl:ENSMUST00000058688 Ensembl:ENSMUST00000172299
GeneID:320311 KEGG:mmu:320311 UCSC:uc011wpy.1 InParanoid:Q0VF67
ChiTaRS:RNF152 NextBio:396478 Bgee:Q8BG47 CleanEx:MM_RNF152
Genevestigator:Q8BG47 GermOnline:ENSMUSG00000047496 Uniprot:Q8BG47
Length = 203
Score = 123 (48.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 35/94 (37%), Positives = 41/94 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
G+ LPP F V+QL D IP S H
Sbjct: 56 --GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEH 87
>RGD|1305251 [details] [associations]
symbol:Rnf152 "ring finger protein 152" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005764 "lysosome" evidence=ISO;ISS]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISO;ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 RGD:1305251 Prosite:PS00518
GO:GO:0016021 GO:GO:0006915 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070936 CTD:220441 KO:K15705
GeneTree:ENSGT00530000063683 OMA:PWCRGIT OrthoDB:EOG4G7C09
EMBL:CH474000 IPI:IPI00360083 RefSeq:NP_001099775.1
UniGene:Rn.169056 ProteinModelPortal:D4A723
Ensembl:ENSRNOT00000019921 GeneID:293561 KEGG:rno:293561
UCSC:RGD:1305251 NextBio:636389 Uniprot:D4A723
Length = 203
Score = 123 (48.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 35/94 (37%), Positives = 41/94 (43%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
G+ LPP F V+QL D IP S H
Sbjct: 56 --GITKLPPGFSVSQLPDDPEVLAVIAIPHTSEH 87
>ZFIN|ZDB-GENE-080227-9 [details] [associations]
symbol:rnf207b "ring finger protein 207b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-080227-9 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00510000048612 EMBL:CR847529
IPI:IPI00769551 RefSeq:NP_001188378.1 UniGene:Dr.85258
Ensembl:ENSDART00000142000 GeneID:568322 KEGG:dre:568322 CTD:568322
NextBio:20889109 Bgee:E9QHE3 Uniprot:E9QHE3
Length = 634
Score = 132 (51.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 48/146 (32%), Positives = 63/146 (43%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCL-SRIAASQTRETGTLRCPICREQITIPRG 89
L C C Y EH P LL C HT C CL R+A S+ L CP+C Q +
Sbjct: 23 LVCHLCQEQY---EH-PCLLDCYHTFCASCLRGRVADSR------LTCPVCGHQSVVK-- 70
Query: 90 GVAALPPS-----FLVNQLLDLMSR-QRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGG 143
G+ ALPP FLV+ D Q + +C + + +C TC C C
Sbjct: 71 GINALPPEDRLLKFLVDSSADSEETVQCANCDLECKKQDVDAMYYCNTCCQPLCRDCRE- 129
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSE 169
+ H + S H I+ S+A KR E
Sbjct: 130 TTHKAKMF-SRHEIV--SLA-KRTKE 151
>ZFIN|ZDB-GENE-110411-205 [details] [associations]
symbol:mid1 "midline 1" species:7955 "Danio rerio"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003877 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060 SMART:SM00184
SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-110411-205 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 SUPFAM:SSF49265 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101726 CTD:4281 KO:K08285 EMBL:CABZ01067698
EMBL:CABZ01067699 EMBL:CABZ01067700 EMBL:CABZ01067701
EMBL:CABZ01067702 EMBL:CABZ01067703 EMBL:CABZ01067704 EMBL:FP102517
IPI:IPI00495133 RefSeq:XP_002663478.1 ProteinModelPortal:E7FAU0
Ensembl:ENSDART00000085253 GeneID:100330952 KEGG:dre:100330952
Uniprot:E7FAU0
Length = 667
Score = 132 (51.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ-------TRETGTLRC 77
D ES LTC CL +++ P LLPC+H++C HC RI S ++ +C
Sbjct: 2 DTLESELTCPICLELFED----PLLLPCAHSLCFHCAHRILTSHCAAFDESSKPPSAFQC 57
Query: 78 PICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQEL---LFCETCD 133
P CR IT+ + G+ L + + +++ Q+ + P T +++ C+
Sbjct: 58 PTCRYVITLDQQGLDGLKRNVTLQNIIERF--QKASLSGPNSPTETRKQISPSAMSSACE 115
Query: 134 TVFCLQC 140
V C C
Sbjct: 116 AVQCQFC 122
>UNIPROTKB|Q90WD1 [details] [associations]
symbol:MID1 "Midline-1" species:9031 "Gallus gallus"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003877 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060 SMART:SM00184
SMART:SM00336 SMART:SM00502 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 SUPFAM:SSF49265 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101726 HOVERGEN:HBG056432
EMBL:AADN02071202 EMBL:AADN02071203 EMBL:AADN02071204
EMBL:AADN02071205 EMBL:AADN02071206 EMBL:AADN02071207
EMBL:AADN02071208 EMBL:AADN02071209 EMBL:AADN02071210
EMBL:AADN02071211 EMBL:AADN02071212 EMBL:AADN02071213
EMBL:AADN02071214 EMBL:AADN02071215 EMBL:AADN02071216
EMBL:AADN02071217 EMBL:AADN02071218 EMBL:AADN02071219
EMBL:AADN02071220 EMBL:AADN02071221 EMBL:AADN02071222 EMBL:AF269102
IPI:IPI00681019 UniGene:Gga.159 SMR:Q90WD1
Ensembl:ENSGALT00000030282 Uniprot:Q90WD1
Length = 667
Score = 134 (52.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-----AASQTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI A+++ E+ T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCASNEPVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F +C+ V
Sbjct: 61 YVITLSQRGLEGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDSNSMSSCEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
Score = 36 (17.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 164 IKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKA 199
IK + L K + ++ K C ER ++L A ++
Sbjct: 284 IKEGKVVRLRKLAQQIANCKQCIERSTSLISQAEQS 319
>WB|WBGene00044436 [details] [associations]
symbol:Y47G6A.31 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0009792 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG324377
EMBL:FO081580 RefSeq:NP_001021767.1 UniGene:Cel.29691
ProteinModelPortal:Q4W5S1 SMR:Q4W5S1 EnsemblMetazoa:Y47G6A.31
GeneID:3565969 KEGG:cel:CELE_Y47G6A.31 UCSC:Y47G6A.31 CTD:3565969
WormBase:Y47G6A.31 InParanoid:Q4W5S1 NextBio:958569 Uniprot:Q4W5S1
Length = 212
Score = 123 (48.4 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 29 SFLTCGTCLCMYDGGEHTPKLLP-CSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
S L C C +D +H PKLL C HT C CL SQ +T CP+CRE + +
Sbjct: 30 SRLECSICFFDFDDFQHLPKLLENCGHTFCYSCLFDWLKSQ--DT----CPMCREAVNMT 83
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETC 132
+ +P + ++L + +++ + P+C+ + + +C TC
Sbjct: 84 Q----EIPTNV---EILAVFEKKKAN--PECNCDDESSVYYCPTC 119
>RGD|1560399 [details] [associations]
symbol:Rnf182 "ring finger protein 182" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA;ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1560399 Prosite:PS00518
GO:GO:0043231 GO:GO:0016021 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 EMBL:CH473977
GeneTree:ENSGT00530000063683 CTD:221687 KO:K11983 OMA:CLPDNPT
OrthoDB:EOG4ZCT5G IPI:IPI00189945 RefSeq:NP_001102587.1
UniGene:Rn.141306 Ensembl:ENSRNOT00000024323 GeneID:498726
KEGG:rno:498726 UCSC:RGD:1560399 NextBio:700664 Uniprot:D3ZBM4
Length = 247
Score = 125 (49.1 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP N L++L + KC N ELL
Sbjct: 78 VSSLPDDN--NILVNLTCGSKGK---KCLPENPTELL 109
>UNIPROTKB|G3N3V7 [details] [associations]
symbol:RNF182 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043231 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063683
OMA:CLPDNPT EMBL:DAAA02055678 UniGene:Bt.62029
Ensembl:ENSBTAT00000064601 Uniprot:G3N3V7
Length = 249
Score = 125 (49.1 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLGCCHRVCAKCLCKIINFGDTPHGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP N LL+L + KC N ELL
Sbjct: 78 VSSLPDDN--NILLNLTCGGGKG--KKCLPENPTELL 110
>UNIPROTKB|E2RIR1 [details] [associations]
symbol:RNF183 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00530000063798
EMBL:AAEX03000691 Ensembl:ENSCAFT00000003708 OMA:PAWVFNA
Uniprot:E2RIR1
Length = 308
Score = 127 (49.8 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI-PRGGV 91
C C+ +DG PK L C H CL CL+R++ + + CP+CR + PR G+
Sbjct: 65 CLICVSPFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGDAVACPVCRAPTRLAPRRGL 124
Query: 92 AALP 95
ALP
Sbjct: 125 PALP 128
>RGD|631346 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016235 "aggresome" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0070201 "regulation of establishment of protein localization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 42/163 (25%), Positives = 68/163 (41%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL ++ P +L C H+ C +CL ++ E LRCP+CR+ +
Sbjct: 14 LQCPICLEVFK----EPLMLQCGHSYCKNCLDSLSEHLDSE---LRCPVCRQSVDC---- 62
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSST 149
++ PP+ + +++D + R P H+ L LFCE C C +H
Sbjct: 63 -SSSPPNVSLARVIDAL-RLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQ-- 118
Query: 150 SGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
H + P S RM E L + +E +++ E L
Sbjct: 119 ----HHRVTPVSTVYSRMKEELAGRLSELKEQHRDVEEHIGKL 157
>UNIPROTKB|Q810I1 [details] [associations]
symbol:Trim50 "E3 ubiquitin-protein ligase TRIM50"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 42/163 (25%), Positives = 68/163 (41%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL ++ P +L C H+ C +CL ++ E LRCP+CR+ +
Sbjct: 14 LQCPICLEVFK----EPLMLQCGHSYCKNCLDSLSEHLDSE---LRCPVCRQSVDC---- 62
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSST 149
++ PP+ + +++D + R P H+ L LFCE C C +H
Sbjct: 63 -SSSPPNVSLARVIDAL-RLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQ-- 118
Query: 150 SGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
H + P S RM E L + +E +++ E L
Sbjct: 119 ----HHRVTPVSTVYSRMKEELAGRLSELKEQHRDVEEHIGKL 157
>UNIPROTKB|E1C2W7 [details] [associations]
symbol:RNF152 "E3 ubiquitin-protein ligase RNF152"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0005764
"lysosome" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0016021 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070936 CTD:220441 KO:K15705
GeneTree:ENSGT00530000063683 OMA:PWCRGIT EMBL:AC145926
IPI:IPI00585596 RefSeq:XP_418995.2 UniGene:Gga.53162
ProteinModelPortal:E1C2W7 Ensembl:ENSGALT00000021041 GeneID:420909
KEGG:gga:420909 NextBio:20823758 Uniprot:E1C2W7
Length = 203
Score = 122 (48.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 31/78 (39%), Positives = 37/78 (47%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ LRCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DLRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLD 105
G+ LPP + V+QL D
Sbjct: 56 --GITKLPPGYSVSQLPD 71
>UNIPROTKB|Q86XT4 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC073841
HOGENOM:HOG000234133 EMBL:AY081948 EMBL:AY081949 IPI:IPI00173642
IPI:IPI00477038 RefSeq:NP_835226.1 UniGene:Hs.647053
ProteinModelPortal:Q86XT4 SMR:Q86XT4 STRING:Q86XT4
PhosphoSite:Q86XT4 DMDM:56404881 PRIDE:Q86XT4
Ensembl:ENST00000333149 Ensembl:ENST00000453152 GeneID:135892
KEGG:hsa:135892 UCSC:uc003txy.1 UCSC:uc003txz.1 CTD:135892
GeneCards:GC07M072726 HGNC:HGNC:19017 HPA:HPA019862 MIM:612548
neXtProt:NX_Q86XT4 PharmGKB:PA38778 eggNOG:NOG245385
HOVERGEN:HBG106596 InParanoid:Q86XT4 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 PhylomeDB:Q86XT4 GenomeRNAi:135892 NextBio:83506
ArrayExpress:Q86XT4 Bgee:Q86XT4 CleanEx:HS_TRIM50
Genevestigator:Q86XT4 GermOnline:ENSG00000146755 Uniprot:Q86XT4
Length = 487
Score = 130 (50.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 45/161 (27%), Positives = 68/161 (42%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E +L C CL ++ P +L C H+ C CL ++ E LRCP+CR+ +
Sbjct: 11 EDWLQCPICLEVFK----EPLMLQCGHSYCKGCLVSLSCHLDAE---LRCPVCRQAVD-- 61
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNH 146
G ++LP L ++++ + R PK H+ L LFCE + C C +H
Sbjct: 62 --GSSSLPNVSLA-RVIEAL-RLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSH 117
Query: 147 SSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPE 187
H + P S RM E L +E + K E
Sbjct: 118 Q------HHPVTPVSTVYSRMKEELAALISELKQEQKKVDE 152
>UNIPROTKB|E1BAD8 [details] [associations]
symbol:MID1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032874 "positive regulation of stress-activated MAPK
cascade" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003649
InterPro:IPR003877 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00622
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853
SMART:SM00060 SMART:SM00184 SMART:SM00336 SMART:SM00502
Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
SUPFAM:SSF49265 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005881
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0032874 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101726 CTD:4281 KO:K08285
OMA:TDEQLIC EMBL:DAAA02075420 IPI:IPI00697917 RefSeq:NP_001179751.1
UniGene:Bt.58809 ProteinModelPortal:E1BAD8
Ensembl:ENSBTAT00000013398 GeneID:534604 KEGG:bta:534604
NextBio:20876464 Uniprot:E1BAD8
Length = 667
Score = 126 (49.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
IT+ + G+ L + + ++D
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIID 84
Score = 45 (20.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 118 CSTHNSQELL-FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C +Q+ + C TC+ +C +C + H + + H +I
Sbjct: 122 CDQDPAQDAVKTCVTCEVSYCDECLKAT-HPNKKPFTGHRLI 162
Score = 44 (20.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQC 140
C H +++ ++C T D + C C
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALC 198
>UNIPROTKB|E2R7N3 [details] [associations]
symbol:MID1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003649 InterPro:IPR003877
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060
SMART:SM00184 SMART:SM00336 SMART:SM00502 Prosite:PS00518
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 SUPFAM:SSF49265
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101726
CTD:4281 KO:K08285 OMA:TDEQLIC EMBL:AAEX03026139 RefSeq:XP_548857.2
ProteinModelPortal:E2R7N3 Ensembl:ENSCAFT00000018371 GeneID:491737
KEGG:cfa:491737 Uniprot:E2R7N3
Length = 667
Score = 126 (49.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
IT+ + G+ L + + ++D
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIID 84
Score = 45 (20.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 118 CSTHNSQELL-FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C +Q+ + C TC+ +C +C + H + + H +I
Sbjct: 122 CDQDPAQDAVKTCVTCEVSYCDECLKAT-HPNKKPFTGHRLI 162
Score = 44 (20.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQC 140
C H +++ ++C T D + C C
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALC 198
>UNIPROTKB|O15344 [details] [associations]
symbol:MID1 "Midline-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0032874
"positive regulation of stress-activated MAPK cascade"
evidence=IMP] [GO:0000226 "microtubule cytoskeleton organization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=TAS] [GO:0007389 "pattern specification process"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003877 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060 SMART:SM00184
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0005875 GO:GO:0000226 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0005819 GO:GO:0046872 CleanEx:HS_MID1 GO:GO:0016874
SUPFAM:SSF49265 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
EMBL:CH471074 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005874
GO:GO:0007389 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0032874
InterPro:IPR017903 PROSITE:PS51262 EMBL:Y13667 EMBL:AF035360
EMBL:AF041206 EMBL:AF041207 EMBL:AF041208 EMBL:AF041209
EMBL:AF041210 EMBL:AF230976 EMBL:AF230977 EMBL:AF269101
EMBL:AK315095 EMBL:BC053626 IPI:IPI00029324 IPI:IPI00219026
PIR:T09482 RefSeq:NP_000372.1 RefSeq:NP_001092094.1
RefSeq:NP_001180206.1 RefSeq:NP_001180207.1 RefSeq:NP_001180208.1
RefSeq:NP_001180209.1 RefSeq:NP_001180210.1 RefSeq:NP_150632.1
UniGene:Hs.27695 UniGene:Hs.689953 PDB:2DQ5 PDB:2FFW PDB:2JUN
PDBsum:2DQ5 PDBsum:2FFW PDBsum:2JUN ProteinModelPortal:O15344
SMR:O15344 IntAct:O15344 STRING:O15344 PhosphoSite:O15344
PaxDb:O15344 PRIDE:O15344 DNASU:4281 Ensembl:ENST00000317552
Ensembl:ENST00000380779 Ensembl:ENST00000380780
Ensembl:ENST00000380782 Ensembl:ENST00000380785
Ensembl:ENST00000380787 Ensembl:ENST00000453318 GeneID:4281
KEGG:hsa:4281 UCSC:uc004ctc.4 CTD:4281 GeneCards:GC0XM010373
HGNC:HGNC:7095 HPA:HPA003715 MIM:300000 MIM:300552
neXtProt:NX_O15344 Orphanet:2745 PharmGKB:PA30816 eggNOG:NOG253961
HOGENOM:HOG000049193 HOVERGEN:HBG056432 InParanoid:O15344 KO:K08285
OMA:TDEQLIC OrthoDB:EOG49S65S PhylomeDB:O15344
EvolutionaryTrace:O15344 GenomeRNAi:4281 NextBio:16837
ArrayExpress:O15344 Bgee:O15344 Genevestigator:O15344
GermOnline:ENSG00000101871 Uniprot:O15344
Length = 667
Score = 126 (49.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
IT+ + G+ L + + ++D
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIID 84
Score = 45 (20.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 118 CSTHNSQELL-FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C +Q+ + C TC+ +C +C + H + + H +I
Sbjct: 122 CDQDPAQDAVKTCVTCEVSYCDECLKAT-HPNKKPFTGHRLI 162
Score = 44 (20.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQC 140
C H +++ ++C T D + C C
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALC 198
>UNIPROTKB|E1BZ35 [details] [associations]
symbol:RNF182 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0043231
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
GeneTree:ENSGT00530000063683 CTD:221687 KO:K11983 OMA:CLPDNPT
EMBL:AADN02027507 IPI:IPI00592456 RefSeq:XP_001234514.1
Ensembl:ENSGALT00000020737 GeneID:771221 KEGG:gga:771221
NextBio:20921425 Uniprot:E1BZ35
Length = 245
Score = 124 (48.7 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLRQRKPKVLECCHRVCAKCLCKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP N +L+L + KC N ELL
Sbjct: 78 VSSLPDDN--NIILNLACGGKGK---KCLPDNPTELL 109
>UNIPROTKB|Q865W2 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 EMBL:AY081951 RefSeq:NP_999351.1
UniGene:Ssc.17223 ProteinModelPortal:Q865W2
Ensembl:ENSSSCT00000008446 GeneID:397383 KEGG:ssc:397383
ArrayExpress:Q865W2 Uniprot:Q865W2
Length = 486
Score = 129 (50.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 40/165 (24%), Positives = 69/165 (41%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C CL ++ P +L C H+ C CL ++ E LRCP+CR+++
Sbjct: 11 EDRLQCPVCLEVFK----EPLMLQCGHSYCKGCLLSLSRHLDSE---LRCPVCRQEVDS- 62
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
++ PP+ + ++++ + C+ H + LFCE + C C +H
Sbjct: 63 ----SSSPPNVSLARVIEALQLPGDPEPQVCTHHRNPLSLFCEKDQELICGLCGLLGSHQ 118
Query: 148 STSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
H + P S RM E L ++ + K E+ + L
Sbjct: 119 ------HHRVTPVSTVYSRMKEELAALISDLKQEQKKVEEQVAKL 157
>UNIPROTKB|D2H6Z0 [details] [associations]
symbol:RNF152 "E3 ubiquitin-protein ligase RNF152"
species:9646 "Ailuropoda melanoleuca" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0016021 GO:GO:0006915 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0070936 CTD:220441 KO:K15705
EMBL:GL192540 RefSeq:XP_002917555.1 ProteinModelPortal:D2H6Z0
Ensembl:ENSAMET00000020895 GeneID:100463900 KEGG:aml:100463900
GeneTree:ENSGT00530000063683 HOGENOM:HOG000120123 OMA:PWCRGIT
Uniprot:D2H6Z0
Length = 203
Score = 121 (47.7 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/94 (37%), Positives = 40/94 (42%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C HT C CL ++ SQ +RCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKHTCCSVCLQQMRTSQK----DVRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH 121
G+ LPP F V QL D IP S H
Sbjct: 56 --GITKLPPGFSVAQLPDDPEVLAVIAIPHASEH 87
>UNIPROTKB|F1NJG9 [details] [associations]
symbol:F1NJG9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AADN02026962
IPI:IPI00584580 Ensembl:ENSGALT00000034308
GeneTree:ENSGT00680000101527 OMA:LEWEICK Uniprot:F1NJG9
Length = 95
Score = 107 (42.7 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQTRETGTLRCPICREQITIPRGGV 91
C C YD +H LL C+H +C CL I + E G +RCPICR++ + +
Sbjct: 8 CPICTEPYDDEQHKAALLNCNHGLCHACLRAIMDTADGAEFGRVRCPICRQKTPMLEWEI 67
Query: 92 AALPPSFLV 100
L L+
Sbjct: 68 CKLQEELLL 76
>UNIPROTKB|Q3SWY0 [details] [associations]
symbol:RNF183 "RING finger protein 183" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BC104611 IPI:IPI00691598
RefSeq:NP_001030499.1 UniGene:Bt.27925 ProteinModelPortal:Q3SWY0
Ensembl:ENSBTAT00000006005 GeneID:539200 KEGG:bta:539200 CTD:138065
eggNOG:NOG238146 GeneTree:ENSGT00530000063798 HOGENOM:HOG000082461
HOVERGEN:HBG093908 InParanoid:Q3SWY0 OMA:LEGHQLC OrthoDB:EOG4DNF5H
NextBio:20877842 Uniprot:Q3SWY0
Length = 188
Score = 119 (46.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQTRETGTLRCPICREQITIPRGG- 90
C C ++ HTPK+L C H+ C+ CL+ I+ + TR L CP+CR + G
Sbjct: 11 CPVCWNPFNNTFHTPKVLDCCHSFCVECLAHISLVTPTRRR--LLCPLCRHPTVLASGQP 68
Query: 91 VAALPPSFLVNQLLDLMSRQRRHII 115
V LP V LL L + H+I
Sbjct: 69 VTDLPTDTAVLTLLRL---EPHHVI 90
>UNIPROTKB|K7GQY5 [details] [associations]
symbol:MID1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 PROSITE:PS50089 SMART:SM00184 SMART:SM00336
SMART:SM00502 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101726 EMBL:CU856428 EMBL:FP340294
EMBL:FP700184 Ensembl:ENSSSCT00000034452 Uniprot:K7GQY5
Length = 402
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F + + V
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDGNSMSSAEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>UNIPROTKB|Q8N6D2 [details] [associations]
symbol:RNF182 "E3 ubiquitin-protein ligase RNF182"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0043231 GO:GO:0016021 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:CH471087 GO:GO:0004842 InterPro:IPR017907 HSSP:Q13049
CTD:221687 HOGENOM:HOG000261678 KO:K11983 OMA:CLPDNPT EMBL:AK090576
EMBL:AK315528 EMBL:AL138718 EMBL:BC030666 EMBL:BC050030
IPI:IPI00166990 RefSeq:NP_001158504.1 RefSeq:NP_001158505.1
RefSeq:NP_001158506.1 RefSeq:NP_689950.1 UniGene:Hs.111164
ProteinModelPortal:Q8N6D2 SMR:Q8N6D2 IntAct:Q8N6D2 STRING:Q8N6D2
DMDM:74751050 PRIDE:Q8N6D2 DNASU:221687 Ensembl:ENST00000488300
Ensembl:ENST00000537388 Ensembl:ENST00000537663
Ensembl:ENST00000544682 GeneID:221687 KEGG:hsa:221687
UCSC:uc003nbe.3 GeneCards:GC06P013924 HGNC:HGNC:28522 HPA:HPA012309
neXtProt:NX_Q8N6D2 PharmGKB:PA134975171 eggNOG:NOG290325
HOVERGEN:HBG060481 InParanoid:Q8N6D2 OrthoDB:EOG4ZCT5G
PhylomeDB:Q8N6D2 GenomeRNAi:221687 NextBio:91413
ArrayExpress:Q8N6D2 Bgee:Q8N6D2 CleanEx:HS_RNF182
Genevestigator:Q8N6D2 GermOnline:ENSG00000180537 Uniprot:Q8N6D2
Length = 247
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP N L++L + KC N ELL
Sbjct: 78 VSSLPDDN--NILVNLTCGGKGK---KCLPENPTELL 109
>MGI|MGI:3045355 [details] [associations]
symbol:Rnf182 "ring finger protein 182" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:3045355 Prosite:PS00518 GO:GO:0043231
GO:GO:0016021 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:Q13049 GeneTree:ENSGT00530000063683
CTD:221687 HOGENOM:HOG000261678 KO:K11983 OMA:CLPDNPT
eggNOG:NOG290325 HOVERGEN:HBG060481 OrthoDB:EOG4ZCT5G EMBL:AK083175
EMBL:BC089488 IPI:IPI00225205 RefSeq:NP_899027.1 UniGene:Mm.40588
ProteinModelPortal:Q8C432 SMR:Q8C432 PRIDE:Q8C432
Ensembl:ENSMUST00000059986 GeneID:328234 KEGG:mmu:328234
UCSC:uc007qgh.2 InParanoid:Q8C432 NextBio:398183 Bgee:Q8C432
CleanEx:MM_RNF182 Genevestigator:Q8C432
GermOnline:ENSMUSG00000044164 Uniprot:Q8C432
Length = 247
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP N L++L + KC N ELL
Sbjct: 78 VSSLPDDN--NILVNLTCGGKGK---KCLPENPTELL 109
>UNIPROTKB|Q5J1N8 [details] [associations]
symbol:MID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005737
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005874 InterPro:IPR017907
GeneTree:ENSGT00690000101726 eggNOG:NOG253961 HOGENOM:HOG000049193
HOVERGEN:HBG056432 OrthoDB:EOG44J2HG EMBL:AADN02013172
EMBL:AADN02013173 EMBL:AADN02013174 EMBL:AADN02013175 EMBL:AY546077
IPI:IPI00590334 UniGene:Gga.22963 Ensembl:ENSGALT00000006134
InParanoid:Q5J1N8 Uniprot:Q5J1N8
Length = 215
Score = 112 (44.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS--QTRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C C RI S + E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFSCAHRILLSGCSSGESIEPLSAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
I++ G+ L + + ++D
Sbjct: 61 YVISLNHRGLEGLKRNVTLQNIID 84
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C TC+ +C +C + H + + H ++
Sbjct: 136 CITCEVSYCDRCLRAT-HPNKKPFTSHRLV 164
>ZFIN|ZDB-GENE-040718-50 [details] [associations]
symbol:trim55a "tripartite motif-containing 55a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-040718-50
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101638 HOGENOM:HOG000231156
HOVERGEN:HBG071242 KO:K10654 eggNOG:NOG253216 EMBL:BX324211
EMBL:CT574558 EMBL:BC075897 IPI:IPI00505188 RefSeq:NP_001002358.1
UniGene:Dr.77362 SMR:Q6DHS0 STRING:Q6DHS0
Ensembl:ENSDART00000047055 GeneID:436631 KEGG:dre:436631 CTD:436631
InParanoid:Q6DHS0 OMA:QHGYENM OrthoDB:EOG4BCDNK NextBio:20831076
Uniprot:Q6DHS0
Length = 443
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/142 (26%), Positives = 59/142 (41%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQ----TR------ETGTLR 76
E L C CL ++ +LPC H +C C + I AS TR G R
Sbjct: 20 ERQLICPICLEIFT---KPVVILPCQHNLCRKCANDIFQASNPYLPTRGGSSLGSGGRFR 76
Query: 77 CPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK---------CSTHNSQEL- 126
CP CR ++ + R GV L + LV ++D+ ++ P+ C H + +
Sbjct: 77 CPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQESSSSKPEPQVKEEVLMCEEHQDERIN 136
Query: 127 LFCETCDTVFCLQCTGGSNHSS 148
++C TC C C +H +
Sbjct: 137 IYCVTCSVPTCSLCKVFGSHQT 158
>RGD|1561909 [details] [associations]
symbol:RGD1561909 "similar to chromosome 6 open reading frame
148" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1561909 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00530000063798 OrthoDB:EOG44TP93
OMA:PAWVFNA EMBL:CH474090 IPI:IPI00561186 RefSeq:NP_001102804.1
UniGene:Rn.225790 Ensembl:ENSRNOT00000058574 GeneID:502300
KEGG:rno:502300 UCSC:RGD:1561909 CTD:502300 NextBio:711177
Uniprot:D3ZF25
Length = 330
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITI-PRG 89
+ C C+ +DG PK L C H CL CL+R++ + + CP+CR + PR
Sbjct: 61 MECLICVSPFDGIFKLPKRLDCGHVFCLECLARLSLATAGGGDAVACPMCRAPTRLAPRR 120
Query: 90 GVAALP 95
G+ ALP
Sbjct: 121 GLPALP 126
>ZFIN|ZDB-GENE-040801-199 [details] [associations]
symbol:trim35-36 "tripartite motif containing
35-36" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-040801-199 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:CU137686 EMBL:BC077164 IPI:IPI00511023 RefSeq:NP_001003462.1
UniGene:Dr.73072 Ensembl:ENSDART00000031534 GeneID:445068
KEGG:dre:445068 CTD:445068 InParanoid:Q6DEF5 OMA:WIVELKE
NextBio:20831830 Uniprot:Q6DEF5
Length = 450
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/183 (25%), Positives = 73/183 (39%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC C ++ TP +L CSH+ C CL + R T CP+CR + + R
Sbjct: 9 LTCPVCQDIFK----TPVILSCSHSFCKECLQQF----WRNKNTQECPVCRRRSSKDRPL 60
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
V + + L + R+ CS H+ + LFC CL C H
Sbjct: 61 VNLALQNLCESFLKERNERRSSGSEEICSLHSEKLKLFCLEDKQPVCLVCRDSEKHL--- 117
Query: 151 GDSEHTIIPFS-IAIKRMSEILLYKANECV-SKNKVCPERKSNLRPSAHKADAYVRRRGA 208
+HT P S +A + E+ N + S + C E ++ K +++ +
Sbjct: 118 ---KHTFRPVSEVAPAKKEEL-----NTALKSLQEKC-ELNEEMKREFEKTAQHIKAQAE 168
Query: 209 HTQ 211
HT+
Sbjct: 169 HTE 171
>RGD|1305238 [details] [associations]
symbol:Trim32 "tripartite motif-containing 32" species:10116
"Rattus norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005863
"striated muscle myosin thick filament" evidence=ISO;ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017022 "myosin binding" evidence=IEA;ISO]
[GO:0030307 "positive regulation of cell growth" evidence=IEA;ISO]
[GO:0030335 "positive regulation of cell migration"
evidence=IEA;ISO] [GO:0031369 "translation initiation factor
binding" evidence=ISO;ISS] [GO:0034612 "response to tumor necrosis
factor" evidence=IEA;ISO] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043130 "ubiquitin binding"
evidence=IEA;ISO] [GO:0043621 "protein self-association"
evidence=IEA;ISO] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045732 "positive regulation
of protein catabolic process" evidence=ISO;ISS] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0045862
"positive regulation of proteolysis" evidence=IEA;ISO] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=IEA]
[GO:0050769 "positive regulation of neurogenesis" evidence=IEA;ISO]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA;ISO] [GO:2000147 "positive regulation of
cell motility" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1305238 Prosite:PS00518
GO:GO:0005634 GO:GO:0009411 GO:GO:0043066 GO:GO:0030307
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0003723 GO:GO:0050769 GO:GO:0034612 GO:GO:0030335
GO:GO:0045666 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0048147 GO:GO:0004842 GO:GO:0045862 GO:GO:0045444
GO:GO:0045732 InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209
InterPro:IPR017907 GO:GO:0042787 GO:GO:0045787
GeneTree:ENSGT00550000074377 GO:GO:0031369 GO:GO:0005863 CTD:22954
eggNOG:NOG269289 HOGENOM:HOG000120114 HOVERGEN:HBG060344 KO:K10607
OMA:RLPRQFC OrthoDB:EOG4QZ7KF EMBL:CH473978 EMBL:BC081980
EMBL:BC091385 IPI:IPI00208878 RefSeq:NP_001012103.1 UniGene:Rn.4118
SMR:Q66H79 STRING:Q66H79 Ensembl:ENSRNOT00000013675 GeneID:313264
KEGG:rno:313264 UCSC:RGD:1305238 InParanoid:Q66H79 NextBio:665930
Genevestigator:Q66H79 Uniprot:Q66H79
Length = 655
Score = 122 (48.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 33/121 (27%), Positives = 51/121 (42%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+N + E L C C+ + + PKLL C HT+C CL ++ AS G +RCP C
Sbjct: 10 LNLDALRE-VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--G-VRCPFC 65
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ-ELLFCETCDTVFCLQ 139
+ I + L + V +++D + C + FC +C V C
Sbjct: 66 SKITRIT--SLTQLTDNLTVLKIIDTAGLSEAVGLLMCRACGRRLPRQFCRSCGLVLCEP 123
Query: 140 C 140
C
Sbjct: 124 C 124
Score = 47 (21.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 177 ECVSKNKVCP-ERKSNLRPSAHKADAYVRRRGAHTQTPPLFSHGLSPLSLPDSSHALLIT 235
E V + P +++S+ S+ + ++++ GA TP +F+ +S L + S L+
Sbjct: 333 EVVPSPRASPAKQRSSEAASSIQQCLFLKKMGAKGSTPGMFNLPVS-LYVTSQSEVLVAD 391
Query: 236 RRAY 239
R Y
Sbjct: 392 RGNY 395
Score = 41 (19.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 221 SPLSLPDSSHALLITRRAYVRRRGAHTQTPPLFS 254
SP S A I + ++++ GA TP +F+
Sbjct: 341 SPAKQRSSEAASSIQQCLFLKKMGAKGSTPGMFN 374
>ZFIN|ZDB-GENE-060428-1 [details] [associations]
symbol:trim32 "tripartite motif-containing 32"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0070121
"Kupffer's vesicle development" evidence=IMP] [GO:0032402
"melanosome transport" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-060428-1
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070121
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907 GO:GO:0032402
CTD:22954 eggNOG:NOG269289 HOGENOM:HOG000120114 HOVERGEN:HBG060344
KO:K10607 OrthoDB:EOG4QZ7KF EMBL:BC154641 EMBL:BC171687
EMBL:BC171691 IPI:IPI00486048 RefSeq:NP_001107066.1
UniGene:Dr.73145 SMR:A8WGA9 STRING:A8WGA9 GeneID:562764
KEGG:dre:562764 NextBio:20884574 Uniprot:A8WGA9
Length = 663
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/111 (30%), Positives = 51/111 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL Y+ + PKLL C H+VC CL ++ AS G +RCP C + +
Sbjct: 16 LECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTIN--G-VRCPFCSKVSRM--SS 70
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKC-STHNSQELLFCETCDTVFCLQC 140
++ L + V +++D S ++ C S N +C C V C C
Sbjct: 71 ISQLADNLTVLKIIDCASACSSNMGLMCKSCKNRLPRQYCCDCSIVLCDIC 121
>UNIPROTKB|A6PVI4 [details] [associations]
symbol:MID2 "Probable E3 ubiquitin-protein ligase MID2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL109946
HOVERGEN:HBG056432 EMBL:AL034399 UniGene:Hs.12256 HGNC:HGNC:7096
IPI:IPI00956726 SMR:A6PVI4 STRING:A6PVI4 Ensembl:ENST00000451923
HOGENOM:HOG000170021 Uniprot:A6PVI4
Length = 219
Score = 112 (44.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAAS-----QTRETGT-LRCPICR 81
ES LTC CL +++ P LLPC+H++C C RI S ++ E T +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLD 105
I++ G+ L + + ++D
Sbjct: 61 YVISLNHRGLDGLKRNVTLQNIID 84
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 129 CETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C TC+ +C +C + H + + H ++
Sbjct: 134 CITCEVSYCDRCLRAT-HPNKKPFTSHRLV 162
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQC 140
C H ++++ ++C + D + C C
Sbjct: 175 CLDHENEKVNMYCVSDDQLICALC 198
>WB|WBGene00010000 [details] [associations]
symbol:F53F8.3 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00530000068511 EMBL:Z81547
PIR:T22589 RefSeq:NP_507996.1 ProteinModelPortal:O62260 SMR:O62260
STRING:O62260 PaxDb:O62260 EnsemblMetazoa:F53F8.3 GeneID:180353
KEGG:cel:CELE_F53F8.3 UCSC:F53F8.3 CTD:180353 WormBase:F53F8.3
eggNOG:NOG255735 InParanoid:O62260 OMA:CEICACK NextBio:908994
Uniprot:O62260
Length = 209
Score = 120 (47.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 32 TCGTCLCMYDGG--EHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
TC C C ++G + TP++L C HT+C+ C+ +I G ++CP CR I
Sbjct: 141 TCEICACKFEGETMDQTPRVLGCGHTMCMGCVQKIVGQ-----GYIKCPFCRIVTKIGTT 195
Query: 90 GVAALPPSFLV 100
+ LP +++V
Sbjct: 196 PLNNLPKNYIV 206
>ZFIN|ZDB-GENE-040426-1003 [details] [associations]
symbol:zgc:56376 "zgc:56376" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-040426-1003 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR017903 PROSITE:PS51262
HOVERGEN:HBG071242 KO:K10653 EMBL:BC049414 IPI:IPI00510776
RefSeq:NP_957389.1 UniGene:Dr.133568 ProteinModelPortal:Q7ZWH0
SMR:Q7ZWH0 GeneID:394070 KEGG:dre:394070 NextBio:20815027
ArrayExpress:Q7ZWH0 Uniprot:Q7ZWH0
Length = 348
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTR---ETGTLRCPICREQI 84
E L+C CL M+ +LPC H +C C S + S+ G RCP CR ++
Sbjct: 20 EKQLSCPICLDMFT---KPVVILPCQHNLCRGCASDLYDSRNPYRFSGGVFRCPTCRFEV 76
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQR 111
+ R GV L + LV ++D+ +Q+
Sbjct: 77 VLDRHGVHGLQRNLLVENIIDIYKQQQ 103
>UNIPROTKB|F1RV75 [details] [associations]
symbol:RNF182 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043231 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063683
KO:K11983 OMA:CLPDNPT EMBL:CT827871 RefSeq:XP_001928710.1
Ensembl:ENSSSCT00000001152 GeneID:100154575 KEGG:ssc:100154575
Uniprot:F1RV75
Length = 247
Score = 122 (48.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/97 (31%), Positives = 42/97 (43%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLGCCHRVCAKCLCKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
V++LP + L + R KC N ELL
Sbjct: 78 VSSLPDDNNILVTLTCGGKGR-----KCLPENPTELL 109
>RGD|1309168 [details] [associations]
symbol:Trim45 "tripartite motif-containing 45" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0060348 "bone
development" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR001298 InterPro:IPR003649 Pfam:PF00643 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
Pfam:PF00097 RGD:1309168 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR017907 GeneTree:ENSGT00550000074377
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH474015
CTD:80263 KO:K12021 IPI:IPI00372440 RefSeq:NP_001099923.1
UniGene:Rn.102590 Ensembl:ENSRNOT00000043146 GeneID:295323
KEGG:rno:295323 UCSC:RGD:1309168 NextBio:639353 Uniprot:D4A7S9
Length = 579
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQ-LLDLMSRQRRHIIPKCSTHNSQEL-L 127
+ G L CP+C Q+ +P GGV AL L +N +L+ + + + ++ C + +E+
Sbjct: 89 QIGIL-CPVCDAQVDLPLGGVKALTVDHLAMNDVMLESLHGEGQGLV--CDLCSDREVEK 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C+TC C C H ++HT++
Sbjct: 146 RCQTCKANLCHFCCQA--HRRQKKTTDHTMV 174
Score = 82 (33.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
C +CL ++ P+LLPC HTVC CL R+
Sbjct: 29 CPSCLRLFK----VPRLLPCLHTVCTSCLERL 56
Score = 72 (30.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN 145
C +H ++EL LFCE CD C C G +
Sbjct: 191 CPSHPAEELRLFCELCDRPVCRDCVVGEH 219
Score = 45 (20.9 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEI--LLYKANECVSKNKVC--PERKS 190
+ H TSG ++ + ++R+ ++ + Y A V+ +K+C P+ K+
Sbjct: 331 TEHLLTSGSDLEILVTKGVVVERLRKLNKVEYSARPGVN-HKICFSPQEKA 380
>UNIPROTKB|K7GQ63 [details] [associations]
symbol:MID1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060
SMART:SM00184 SMART:SM00336 SMART:SM00502 Prosite:PS00518
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101726
EMBL:CU856428 EMBL:FP340294 EMBL:FP700184
Ensembl:ENSSSCT00000033940 Uniprot:K7GQ63
Length = 482
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F + + V
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDGNSMSSAEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>MGI|MGI:1918187 [details] [associations]
symbol:Trim45 "tripartite motif-containing 45" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0060348 "bone
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00502 SMART:SM00557 MGI:MGI:1918187
Pfam:PF00097 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR017907 GeneTree:ENSGT00550000074377
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:AL669872
CTD:80263 eggNOG:NOG294122 HOGENOM:HOG000231266 HOVERGEN:HBG054905
KO:K12021 OrthoDB:EOG4Q2DFH EMBL:AK150574 EMBL:AK153571
EMBL:AK076600 EMBL:BC057358 IPI:IPI00468445 IPI:IPI00828776
RefSeq:NP_001159424.1 RefSeq:NP_001159425.1 RefSeq:NP_919324.2
UniGene:Mm.189351 ProteinModelPortal:Q6PFY8 SMR:Q6PFY8
STRING:Q6PFY8 PhosphoSite:Q6PFY8 PRIDE:Q6PFY8
Ensembl:ENSMUST00000037409 Ensembl:ENSMUST00000106980 GeneID:229644
KEGG:mmu:229644 NextBio:379571 Bgee:Q6PFY8 CleanEx:MM_TRIM45
Genevestigator:Q6PFY8 GermOnline:ENSMUSG00000033233 Uniprot:Q6PFY8
Length = 580
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQLL--DLMSRQRRHIIPKCSTHNSQELL 127
+ G L CP+C Q+ +P GGV AL L +N +L +L + + CS ++
Sbjct: 89 QIGIL-CPVCDAQVDLPLGGVKALTVDHLAMNDVLLENLRGEGQGLVCDLCSDREVEKR- 146
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
C+TC C C H + HT++ +K S++
Sbjct: 147 -CQTCKANLCHFCCQA--HRRQKKTTYHTMVDLK-DLKGYSQV 185
Score = 82 (33.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
C TCL ++ P+LLPC HTVC CL ++
Sbjct: 29 CPTCLRLFK----VPRLLPCLHTVCTTCLEKL 56
Score = 72 (30.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN 145
C +H ++EL LFCE CD C C G +
Sbjct: 191 CPSHPAEELRLFCELCDRPVCRDCVVGEH 219
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEI--LLYKANECVSKNKVC--PERKS 190
+ H TSG +I + ++R+ ++ + Y A V+ +K+C P+ K+
Sbjct: 331 TEHLLTSGSDLEILITKGVVVERLRKLNKVEYSARPGVN-HKICFSPQEKA 380
>ZFIN|ZDB-GENE-060929-804 [details] [associations]
symbol:trim23 "tripartite motif containing 23"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003649
InterPro:IPR005225 InterPro:IPR006689 InterPro:IPR007087
InterPro:IPR024156 Pfam:PF00025 Pfam:PF00643 PRINTS:PR00328
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50157 PROSITE:PS51417
SMART:SM00177 SMART:SM00184 SMART:SM00336 SMART:SM00502
Prosite:PS00518 ZFIN:ZDB-GENE-060929-804 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097997 InterPro:IPR017907 EMBL:CR854943
IPI:IPI00805732 Ensembl:ENSDART00000127581 Uniprot:F1Q4Q5
Length = 576
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/149 (27%), Positives = 66/149 (44%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 31 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AVRCPFDRQVTELGDS 86
Query: 90 GVAALPPSFLVNQLLDLMS--------------RQRRHIIPKCS---THNSQELLFCETC 132
GV L +F + +LL+ + R+ I +C TH + ++C C
Sbjct: 87 GVWGLKKNFALLELLERLQNGATNQSGMSEDALREMGECIIRCDEDETHTAS--MYCTVC 144
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C +C+ HS T ++H +P +
Sbjct: 145 ATHLCAECSQ-LTHS-TRTLAKHRRVPLA 171
>UNIPROTKB|D3ZZT2 [details] [associations]
symbol:Trim45 "Protein Trim45" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00502 SMART:SM00557 Pfam:PF00097 RGD:1309168
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR017907
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 OrthoDB:EOG4Q2DFH
IPI:IPI00558118 Ensembl:ENSRNOT00000020615 ArrayExpress:D3ZZT2
Uniprot:D3ZZT2
Length = 607
Score = 90 (36.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQ-LLDLMSRQRRHIIPKCSTHNSQEL-L 127
+ G L CP+C Q+ +P GGV AL L +N +L+ + + + ++ C + +E+
Sbjct: 89 QIGIL-CPVCDAQVDLPLGGVKALTVDHLAMNDVMLESLHGEGQGLV--CDLCSDREVEK 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C+TC C C H ++HT++
Sbjct: 146 RCQTCKANLCHFCCQA--HRRQKKTTDHTMV 174
Score = 82 (33.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
C +CL ++ P+LLPC HTVC CL R+
Sbjct: 29 CPSCLRLFK----VPRLLPCLHTVCTSCLERL 56
Score = 72 (30.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN 145
C +H ++EL LFCE CD C C G +
Sbjct: 191 CPSHPAEELRLFCELCDRPVCRDCVVGEH 219
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEI--LLYKANECVSKNKVC--PERKS 190
+ H TSG ++ + ++R+ ++ + Y A V+ +K+C P+ K+
Sbjct: 331 TEHLLTSGSDLEILVTKGVVVERLRKLNKVEYSARPGVN-HKICFSPQEKA 380
>WB|WBGene00016320 [details] [associations]
symbol:C32E8.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:FO080749 eggNOG:KOG4185 GeneTree:ENSGT00530000068511
PIR:T25602 RefSeq:NP_491223.1 UniGene:Cel.19176
ProteinModelPortal:P91131 SMR:P91131 DIP:DIP-24579N IntAct:P91131
MINT:MINT-1126527 EnsemblMetazoa:C32E8.1 GeneID:183123
KEGG:cel:CELE_C32E8.1 UCSC:C32E8.1 CTD:183123 WormBase:C32E8.1
InParanoid:P91131 NextBio:920006 Uniprot:P91131
Length = 154
Score = 110 (43.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 31 LTCGTCLCMY-DGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
+ C C Y D G P++LPC HT+C C I ++ +RCP R+
Sbjct: 86 IECEICAVQYGDSGMTVPRVLPCGHTICTECAGNIIQNKM-----IRCPFDRKVYKFNNK 140
Query: 90 GVAALPPSF-LVNQ 102
+ LP +F L+NQ
Sbjct: 141 TIENLPKNFSLINQ 154
>ZFIN|ZDB-GENE-040718-482 [details] [associations]
symbol:zgc:92594 "zgc:92594" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-040718-482 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FP236812 GeneTree:ENSGT00690000102221
IPI:IPI00993075 Ensembl:ENSDART00000128137 ArrayExpress:F1R3Q1
Bgee:F1R3Q1 Uniprot:F1R3Q1
Length = 437
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/98 (36%), Positives = 45/98 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E LTC CL +Y P LLPC H CL CL R+ R G LRCP CR+
Sbjct: 12 EEELTCPVCLDLY----RDPHLLPCGHNFCLQCLRRLKGRSER--GRLRCPECRQTHRC- 64
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQE 125
AA +F +L ++ RR P+ ST + E
Sbjct: 65 ---AAAWQKNF---KLANITDGFRRRSQPERSTQSRSE 96
>TAIR|locus:4515102561 [details] [associations]
symbol:AT1G21651 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 EMBL:CP002684
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016772 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q04724
EMBL:AY065404 EMBL:AY096502 EMBL:AK229742 IPI:IPI00517824
RefSeq:NP_001117325.1 UniGene:At.47967 ProteinModelPortal:Q8VZ06
SMR:Q8VZ06 PaxDb:Q8VZ06 PRIDE:Q8VZ06 EnsemblPlants:AT1G21651.1
GeneID:6241299 KEGG:ath:AT1G21651 TAIR:At1g21651 PhylomeDB:Q8VZ06
ProtClustDB:CLSN2708440 ArrayExpress:Q8VZ06 Genevestigator:Q8VZ06
Uniprot:Q8VZ06
Length = 811
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVA 92
C CL YDG P++L C HT C CL+ + + T+RCP C + P G +
Sbjct: 6 CPVCLQSYDGESTVPRVLACGHTACEECLTNLPK---KFPDTIRCPACTVLVKFPPQGPS 62
Query: 93 ALPPSFLVNQLLDLMSR 109
ALP + + +L +S+
Sbjct: 63 ALPKNIDLLRLFPSISK 79
>UNIPROTKB|F1SMI2 [details] [associations]
symbol:LOC100737405 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K10607 OMA:RLPRQFC EMBL:CU633594
RefSeq:XP_003480637.1 Ensembl:ENSSSCT00000006049
Ensembl:ENSSSCT00000035400 GeneID:100737405 KEGG:ssc:100737405
Uniprot:F1SMI2
Length = 652
Score = 125 (49.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+N + E L C C+ + + PKLL C HT+C CL ++ AS G +RCP C
Sbjct: 9 LNLDALRE-VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--G-VRCPFC 64
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ-ELLFCETCDTVFCLQ 139
+ I ++ L + V +++D + C + FC +C V C
Sbjct: 65 SKITRIT--SLSQLTDNLTVLKIIDTAGLSEAVGLLMCRACGRRLPRQFCRSCSVVLCEP 122
Query: 140 C 140
C
Sbjct: 123 C 123
Score = 42 (19.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/121 (18%), Positives = 44/121 (36%)
Query: 135 VFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNK-VCPERKSNLR 193
V L+ T + H + + + ++ + + + V K + V E +
Sbjct: 251 VALLEETAEEEEPELTASLPHELTLQDVELLKVGHVGPLQIGQAVKKPRTVNMEDSWAME 310
Query: 194 PSAHKADAYVRRRGAHTQTPPLFSHGLSPLSLPDSSHALLITRRAYVRRRGAHTQTPPLF 253
+A A V R + S SP + A I + ++++ GA TP +F
Sbjct: 311 AAASAASTSVTFREMDMSPEEVASPRASPAKQRGAETAASIQQCLFLKKMGAKGSTPGMF 370
Query: 254 S 254
+
Sbjct: 371 N 371
>UNIPROTKB|Q6INB3 [details] [associations]
symbol:rnf182 "E3 ubiquitin-protein ligase RNF182"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 HSSP:Q13049 CTD:221687 KO:K11983
HOVERGEN:HBG060481 EMBL:BC072370 RefSeq:NP_001085077.1
UniGene:Xl.17893 ProteinModelPortal:Q6INB3 GeneID:432148
KEGG:xla:432148 Uniprot:Q6INB3
Length = 246
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 25 DFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQI 84
+ N L C C Y+ + PK+L C H VC CL ++ + CP CR +
Sbjct: 14 NLNSDELECKICYNRYNLRQRKPKVLGCCHRVCAKCLYKLVDCGESPQCVIVCPFCRFET 73
Query: 85 TIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL 127
+P V++LP N LL+L R KC N ELL
Sbjct: 74 RMPEDEVSSLPDDN--NILLNLACGGRG----KCVGDNPTELL 110
>MGI|MGI:2664992 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016235 "aggresome" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070201 "regulation of establishment of protein localization"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2664992
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 EMBL:AY081947
IPI:IPI00408393 RefSeq:NP_839971.1 UniGene:Mm.261834
ProteinModelPortal:Q810I2 SMR:Q810I2 STRING:Q810I2
PhosphoSite:Q810I2 PRIDE:Q810I2 Ensembl:ENSMUST00000065785
GeneID:215061 KEGG:mmu:215061 UCSC:uc008zyf.1 NextBio:374596
CleanEx:MM_TRIM50 Genevestigator:Q810I2 Uniprot:Q810I2
Length = 483
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/163 (25%), Positives = 67/163 (41%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C CL ++ P +L C H+ C CL ++ E L CP+CR+ +
Sbjct: 14 LQCPICLEVFK----EPLMLQCGHSYCKDCLDNLSQHLDSE---LCCPVCRQSVDC---- 62
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQEL-LFCETCDTVFCLQCTGGSNHSST 149
++ PP+ + +++D + R I P H+ L LFCE C C +H
Sbjct: 63 -SSSPPNVSLARVIDAL-RLPGDIEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQ-- 118
Query: 150 SGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
H + P S RM E L + +E +++ E L
Sbjct: 119 ----HHRVTPVSTVYSRMKEELAGRISELKEEHRNVEEHIGKL 157
>UNIPROTKB|E1BNQ6 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:DAAA02058197 IPI:IPI00688074 RefSeq:NP_001193185.1
UniGene:Bt.112402 ProteinModelPortal:E1BNQ6 PRIDE:E1BNQ6
Ensembl:ENSBTAT00000007623 GeneID:616685 KEGG:bta:616685
NextBio:20900262 Uniprot:E1BNQ6
Length = 487
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/168 (25%), Positives = 72/168 (42%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C CL ++ P +L C H+ C CL ++ E LRCP+CR+++
Sbjct: 11 EDRLQCPMCLEVFK----EPLMLQCGHSYCKGCLVSLSHHLASE---LRCPVCRQEVDY- 62
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPK-CSTHNSQELLFCETCDTVFCLQC--TGGS 144
++ PP+ + ++++ + R P+ C+ H + LFCE + C C G
Sbjct: 63 ----SSSPPNVSLAKVIEAL-RLPGDPEPQVCAHHRNPLSLFCEKDQELICGLCGLLGAH 117
Query: 145 NHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
H H + P S RM E L ++ + K E+ + L
Sbjct: 118 QH--------HRVTPVSTVYSRMKEELAALISDLKQEQKKVDEQIAKL 157
>RGD|1564412 [details] [associations]
symbol:Rnf183 "ring finger protein 183" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1564412 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:138065
GeneTree:ENSGT00530000063798 OrthoDB:EOG4DNF5H IPI:IPI00205244
RefSeq:XP_001063645.2 RefSeq:XP_575838.3 Ensembl:ENSRNOT00000019924
GeneID:500474 KEGG:rno:500474 UCSC:RGD:1564412 NextBio:706298
Uniprot:D4A718
Length = 190
Score = 117 (46.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIA-ASQTRETGTLRCPICREQITIPRGG- 90
C C ++ HTPK+L C H+ C+ CL+ ++ S R L CP+CR+ + G
Sbjct: 13 CPVCWNPFNNTFHTPKVLDCCHSFCVECLAHLSLVSPARRR--LLCPLCRQTTVLASGQP 70
Query: 91 VAALPPSFLVNQLLDLMSRQRRHII 115
V LP +L L+ + H+I
Sbjct: 71 VTDLPTD---TAMLTLLRLEPHHVI 92
>UNIPROTKB|K7GSV3 [details] [associations]
symbol:MID1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003877 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50853
SMART:SM00060 SMART:SM00184 SMART:SM00336 SMART:SM00502
Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101726
EMBL:CU856428 EMBL:FP340294 EMBL:FP700184
Ensembl:ENSSSCT00000035768 Uniprot:K7GSV3
Length = 629
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F + + V
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDGNSMSSAEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>UNIPROTKB|Q96D59 [details] [associations]
symbol:RNF183 "RING finger protein 183" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:138065 eggNOG:NOG238146
HOGENOM:HOG000082461 HOVERGEN:HBG093908 OrthoDB:EOG4DNF5H
EMBL:BC013036 IPI:IPI00177673 RefSeq:NP_659488.2 UniGene:Hs.729641
ProteinModelPortal:Q96D59 SMR:Q96D59 IntAct:Q96D59
MINT:MINT-1474323 STRING:Q96D59 PhosphoSite:Q96D59 DMDM:74760778
PRIDE:Q96D59 DNASU:138065 Ensembl:ENST00000297894
Ensembl:ENST00000416588 Ensembl:ENST00000441031
Ensembl:ENST00000478815 GeneID:138065 KEGG:hsa:138065
UCSC:uc004bgz.3 GeneCards:GC09M116059 HGNC:HGNC:28721
neXtProt:NX_Q96D59 PharmGKB:PA142671055 InParanoid:Q96D59
GenomeRNAi:138065 NextBio:83743 Bgee:Q96D59 CleanEx:HS_RNF183
Genevestigator:Q96D59 GermOnline:ENSG00000165188 Uniprot:Q96D59
Length = 192
Score = 117 (46.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG-V 91
C C ++ HTPK+L C H+ C+ CL+ ++ T L CP+CR+ + G V
Sbjct: 13 CPVCWNPFNNTFHTPKMLDCCHSFCVECLAHLSLV-TPARRRLLCPLCRQPTVLASGQPV 71
Query: 92 AALPPSFLVNQLLDLMSRQRRHII 115
LP +L L+ + H+I
Sbjct: 72 TDLPTD---TAMLTLLRLEPHHVI 92
>WB|WBGene00022872 [details] [associations]
symbol:ZK1240.8 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG303941 GeneTree:ENSGT00530000064633
EMBL:FO080152 HOGENOM:HOG000113967 PIR:C88072 RefSeq:NP_494242.1
UniGene:Cel.28703 ProteinModelPortal:O16683 SMR:O16683
EnsemblMetazoa:ZK1240.8 GeneID:191542 KEGG:cel:CELE_ZK1240.8
UCSC:ZK1240.8 CTD:191542 WormBase:ZK1240.8 InParanoid:O16683
OMA:MMEASSS NextBio:949520 Uniprot:O16683
Length = 292
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/145 (24%), Positives = 64/145 (44%)
Query: 33 CGTCLCMYDGGEHT--PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI-CREQITIPRG 89
C C Y + + P++L C H++C +C ++ ++ + CP C E + G
Sbjct: 6 CEVCNEDYSNLDESRAPRVLKCGHSICQNCAVKLISNSV-----ILCPKKCSETTEVQNG 60
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPKCSTH--NSQELLFCE-TCDTVFCLQCTGGSNH 146
V +L +F + Q +++M + PKC H N E L E C ++ L C
Sbjct: 61 NVESLQKNFGLMQAMEMMEASSSNSPPKCKEHRYNIAEFLCSEHDCPSIDKLMCRTCEEF 120
Query: 147 SSTSGDSEHTIIPFSIAIKRMSEIL 171
+G HT + S+ ++ ++L
Sbjct: 121 GVHTG---HTKVLMSVEAGKIRDVL 142
>UNIPROTKB|G3X679 [details] [associations]
symbol:LOC786377 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00670000097491 EMBL:DAAA02062440
ProteinModelPortal:G3X679 Ensembl:ENSBTAT00000000458 OMA:NITCKIC
NextBio:20927847 Uniprot:G3X679
Length = 448
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 54/181 (29%), Positives = 77/181 (42%)
Query: 28 ESFLTCGTCL-CMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQTRETGTLRCPICREQIT 85
+S LTC C+ C D P + C H+ C CLS QT RCP CR
Sbjct: 10 QSELTCSICMNCFLD-----PVTIDCGHSFCRPCLSLCWEEGQTPR----RCPECR---- 56
Query: 86 IPRGGVAALPPSFLVN---QLLDLMSRQRR----HIIPK--CSTHNSQELLFCETCDTVF 136
G++ P F N + L ++RQ R H + C TH + LFCE T+
Sbjct: 57 ----GISERP-DFKTNIALKRLASLARQARADHDHSSEEQICVTHQEAKGLFCEADQTLL 111
Query: 137 CLQCTGGSNHSSTSGDSEHTIIPFSIA--IKRMSEILLYKANECVSKNKVCPERKSNLRP 194
C C+ H++ S H S +KRMS L+K E + ++C +++N
Sbjct: 112 CGPCSECPEHAAHSHSPIHRAAEESREKLLKRMSS--LWKMREEI---QICLNQEANTTQ 166
Query: 195 S 195
S
Sbjct: 167 S 167
>ZFIN|ZDB-GENE-081030-23 [details] [associations]
symbol:trim35-34 "tripartite motif containing 35-34"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-23 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 OrthoDB:EOG4QNMW8
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:CU539057
IPI:IPI00900847 RefSeq:NP_001137520.1 UniGene:Dr.154012
Ensembl:ENSDART00000036283 GeneID:566050 KEGG:dre:566050
OMA:WALARIT NextBio:20887999 Uniprot:B8JLS7
Length = 452
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/145 (27%), Positives = 56/145 (38%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
TC C ++ TP +L C H+ C CL + S+ T CP+CR R +
Sbjct: 10 TCPVCQDIFK----TPVILSCGHSFCQECLQQCWRSEN----TQECPVCRT-----RSSI 56
Query: 92 AALPPSFLVNQLLD--LMSRQRRHIIPK---CSTHNSQELLFCETCDTVFCLQCTGGSNH 146
A P + + L + L R +RH CS H + L+C CL C H
Sbjct: 57 ADPPVNLALQNLCESHLKKRNKRHSSRSEEICSLHGKKRRLYCVKDKQPVCLVCRDSEKH 116
Query: 147 SSTSGDSEHTIIPFSIAIKRMSEIL 171
+HT P S + E L
Sbjct: 117 L------KHTFRPISEMVSPKKEEL 135
>UNIPROTKB|F1SAY3 [details] [associations]
symbol:LOC100623212 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003649 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00502
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K12021 OMA:QLEPFSV EMBL:CU207228
UniGene:Ssc.14424 Ensembl:ENSSSCT00000007375 KEGG:ssc:100157373
Uniprot:F1SAY3
Length = 422
Score = 87 (35.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQLL--DLMSRQRRHIIPKCSTHNSQELL 127
+ G L CP+C Q+ +P GGV AL L +N ++ L + + CS ++
Sbjct: 89 QIGIL-CPVCDAQVDLPMGGVKALTIDHLAMNDVMLESLRGEGQGLVCDLCSDREVEKR- 146
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
C+TC C C H + HT++ +K S++
Sbjct: 147 -CQTCKANLCHFCCQA--HRRQKKTTYHTMVDLK-DLKGYSQV 185
Score = 80 (33.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 37 LCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
LCM G TP+LLPC HTVC CL ++
Sbjct: 31 LCM--GLFKTPRLLPCLHTVCTTCLEQL 56
>UNIPROTKB|F1SG17 [details] [associations]
symbol:MID1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032874 "positive regulation of stress-activated MAPK
cascade" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003649
InterPro:IPR003877 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00622
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853
SMART:SM00060 SMART:SM00184 SMART:SM00336 SMART:SM00502
Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
SUPFAM:SSF49265 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005881
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0032874 InterPro:IPR017903
PROSITE:PS51262 GeneTree:ENSGT00690000101726 CTD:4281 KO:K08285
OMA:TDEQLIC EMBL:CU856428 EMBL:FP340294 EMBL:FP700184
RefSeq:XP_003134970.1 UniGene:Ssc.38780 Ensembl:ENSSSCT00000013245
Ensembl:ENSSSCT00000032648 Ensembl:ENSSSCT00000033849
GeneID:100524415 KEGG:ssc:100524415 Uniprot:F1SG17
Length = 667
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E+ +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F + + V
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDGNSMSSAEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>RGD|2640 [details] [associations]
symbol:Mid1 "midline 1 (Opitz/BBB syndrome)" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005881
"cytoplasmic microtubule" evidence=IEA;ISO] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003649 InterPro:IPR003877
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060
SMART:SM00184 SMART:SM00336 SMART:SM00502 RGD:2640 Prosite:PS00518
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0016874
SUPFAM:SSF49265 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005881 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GO:GO:0032874 InterPro:IPR017903 PROSITE:PS51262 CTD:4281
eggNOG:NOG253961 HOGENOM:HOG000049193 HOVERGEN:HBG056432 KO:K08285
OrthoDB:EOG49S65S EMBL:AF186461 IPI:IPI00231578 RefSeq:NP_075216.1
UniGene:Rn.228943 ProteinModelPortal:P82458 SMR:P82458 STRING:P82458
PRIDE:P82458 GeneID:54252 KEGG:rno:54252 NextBio:610756
ArrayExpress:P82458 Genevestigator:P82458
GermOnline:ENSRNOG00000003613 Uniprot:P82458
Length = 667
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F + + V
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDANTMSSAEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>MGI|MGI:1100537 [details] [associations]
symbol:Mid1 "midline 1" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007026 "negative regulation of microtubule
depolymerization" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003649 InterPro:IPR003877
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060
SMART:SM00184 SMART:SM00336 SMART:SM00502 MGI:MGI:1100537
Prosite:PS00518 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0046872 CleanEx:MM_MID1 GO:GO:0016874
SUPFAM:SSF49265 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005874 GO:GO:0007026
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
InterPro:IPR017903 PROSITE:PS51262 GeneTree:ENSGT00690000101726
CTD:4281 eggNOG:NOG253961 HOGENOM:HOG000049193 HOVERGEN:HBG056432
KO:K08285 OrthoDB:EOG49S65S EMBL:Y14848 EMBL:AF026565 EMBL:AL672015
EMBL:CR478112 EMBL:BC053704 IPI:IPI00119492 IPI:IPI00453711
IPI:IPI00830928 PIR:T09013 RefSeq:NP_034927.2 RefSeq:NP_898974.1
UniGene:Mm.34441 UniGene:Mm.444905 UniGene:Mm.490608
ProteinModelPortal:O70583 SMR:O70583 IntAct:O70583 STRING:O70583
PhosphoSite:O70583 PRIDE:O70583 Ensembl:ENSMUST00000036753
Ensembl:ENSMUST00000112104 Ensembl:ENSMUST00000112105
Ensembl:ENSMUST00000163810 Ensembl:ENSMUST00000171433 GeneID:17318
KEGG:mmu:17318 UCSC:uc009uyc.1 InParanoid:B1AV00 ChiTaRS:MID1
NextBio:291882 Bgee:O70583 Genevestigator:O70583
GermOnline:ENSMUSG00000035299 Uniprot:O70583
Length = 680
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F + + V
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDANTMSSAEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>UNIPROTKB|F1LQW6 [details] [associations]
symbol:Mid1 "Midline-1" species:10116 "Rattus norvegicus"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR003877 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50853 SMART:SM00060 SMART:SM00184
SMART:SM00336 SMART:SM00502 Prosite:PS00518 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 SUPFAM:SSF49265 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005881 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GO:GO:0032874 InterPro:IPR017903 PROSITE:PS51262
GeneTree:ENSGT00690000101726 IPI:IPI00231578
Ensembl:ENSRNOT00000004873 ArrayExpress:F1LQW6 Uniprot:F1LQW6
Length = 680
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQ--TRET----GTLRCPICR 81
ES LTC CL +++ P LLPC+H++C +C RI S T E +CP CR
Sbjct: 5 ESELTCPICLELFED----PLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR 60
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMSRQRRHII-PKCSTHNSQELLF----CETCDTVF 136
IT+ + G+ L + + ++D Q+ + P + +E F + + V
Sbjct: 61 HVITLSQRGLDGLKRNVTLQNIIDRF--QKASVSGPNSPSETRRERAFDANTMSSAEKVL 118
Query: 137 CLQC 140
C C
Sbjct: 119 CQFC 122
>WB|WBGene00022868 [details] [associations]
symbol:ZK1240.3 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG284906 GeneTree:ENSGT00530000064633
EMBL:FO080152 HOGENOM:HOG000113967 RefSeq:NP_494239.2
ProteinModelPortal:O16680 SMR:O16680 EnsemblMetazoa:ZK1240.3
GeneID:173588 KEGG:cel:CELE_ZK1240.3 UCSC:ZK1240.3 CTD:173588
WormBase:ZK1240.3 InParanoid:O16680 NextBio:880287 Uniprot:O16680
Length = 304
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 44/175 (25%), Positives = 73/175 (41%)
Query: 33 CGTCLCMYDGGE--HTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
C C Y + H+PK+L C H++C C +++ + + CP CRE I G
Sbjct: 6 CEICCKEYSNIDQNHSPKILKCGHSICQICAAKLITNSC-----IYCPFCRETTKIRDGK 60
Query: 91 VAALPPSFLVNQLLDLMSRQR-RHIIP-----KCSTH--NSQELL-FCETC---DTVFCL 138
V L +F + + +++M + P KCS H N E + +TC D C
Sbjct: 61 VENLKKNFGLMKAIEIMKNSTTKQDTPGFSPTKCSAHPYNLAEFVCMVDTCSAKDKFMCR 120
Query: 139 QCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLR 193
C H G + +I S ++ EIL + + N++ E+ +R
Sbjct: 121 TCEEFGIHK---GHARGLLISESAKLR---EILECRFEKMELNNRIFEEQLKEIR 169
>UNIPROTKB|Q9H8W5 [details] [associations]
symbol:TRIM45 "Tripartite motif-containing protein 45"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR001298 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00557 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR017907 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
CTD:80263 eggNOG:NOG294122 HOGENOM:HOG000231266 HOVERGEN:HBG054905
KO:K12021 OMA:QLEPFSV OrthoDB:EOG4Q2DFH EMBL:AY669488 EMBL:AK023243
EMBL:AK222901 EMBL:AL391476 EMBL:BC034943 IPI:IPI00018747
IPI:IPI00477851 RefSeq:NP_001139107.1 RefSeq:NP_079464.2
UniGene:Hs.301526 PDB:2DS4 PDBsum:2DS4 ProteinModelPortal:Q9H8W5
SMR:Q9H8W5 IntAct:Q9H8W5 STRING:Q9H8W5 PhosphoSite:Q9H8W5
DMDM:90110721 PaxDb:Q9H8W5 PRIDE:Q9H8W5 DNASU:80263
Ensembl:ENST00000256649 Ensembl:ENST00000369464 GeneID:80263
KEGG:hsa:80263 UCSC:uc001egz.2 UCSC:uc009whe.2
GeneCards:GC01M117654 HGNC:HGNC:19018 HPA:HPA030266 MIM:609318
neXtProt:NX_Q9H8W5 PharmGKB:PA134873644 InParanoid:Q9H8W5
PhylomeDB:Q9H8W5 EvolutionaryTrace:Q9H8W5 GenomeRNAi:80263
NextBio:70721 ArrayExpress:Q9H8W5 Bgee:Q9H8W5 CleanEx:HS_TRIM45
Genevestigator:Q9H8W5 GermOnline:ENSG00000134253 Uniprot:Q9H8W5
Length = 580
Score = 94 (38.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQ-LLDLMSRQRRHIIPKCSTHNSQEL-L 127
+ G L CP+C Q+ +P GGV AL L VN +L+ + + + ++ C N +E+
Sbjct: 89 QIGIL-CPVCDAQVDLPMGGVKALTIDHLAVNDVMLESLRGEGQGLV--CDLCNDREVEK 145
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTII 158
C+TC C C H + HT++
Sbjct: 146 RCQTCKANLCHFCCQA--HRRQKKTTYHTMV 174
Score = 75 (31.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
C CL ++ P+LLPC HTVC CL ++
Sbjct: 29 CPLCLGLFKA----PRLLPCLHTVCTTCLEQL 56
Score = 70 (29.7 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN 145
C H ++EL LFCE CD C C G +
Sbjct: 191 CPVHPAEELRLFCEFCDRPVCQDCVVGEH 219
Score = 47 (21.6 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEI--LLYKANECVS-KNKVCPERKS 190
+ H TSG +I + ++R+ ++ + Y V+ K + CP+ K+
Sbjct: 331 TEHLLTSGSDLEILITKRVVVERLRKLNKVQYSTRPGVNDKIRFCPQEKA 380
>UNIPROTKB|H9L198 [details] [associations]
symbol:H9L198 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000315
InterPro:IPR001258 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50119
SMART:SM00336 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013017 PROSITE:PS51125 GeneTree:ENSGT00550000074377
EMBL:AADN02068560 EMBL:AADN02068561 EMBL:AADN02068562
Ensembl:ENSGALT00000029931 OMA:GTAERQF Uniprot:H9L198
Length = 607
Score = 97 (39.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 57 CLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLDLMSR 109
C CL Q+ TL CP+CR+ +P GVAAL +F + L++++ R
Sbjct: 5 CPRCLQNYIPPQSL---TLSCPVCRQTSILPERGVAALQNNFFITNLMEVLQR 54
Score = 72 (30.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 118 CSTHNSQELLF-CETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKR 166
C H + + F CE+C+T C +CT G + EH +P +++
Sbjct: 80 CPNHEGKVMEFYCESCETAMCRECTEGEHR-------EHVTVPLRDVVEQ 122
>UNIPROTKB|I3LQ18 [details] [associations]
symbol:RNF183 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00530000063798
OMA:LEGHQLC EMBL:FP339611 RefSeq:XP_003353662.1
Ensembl:ENSSSCT00000024858 GeneID:100622036 KEGG:ssc:100622036
Uniprot:I3LQ18
Length = 190
Score = 116 (45.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG-V 91
C C ++ HTPK+L C H+ C+ CL+ ++ T L CP+CR+ + G V
Sbjct: 11 CPVCWNPFNNTFHTPKVLDCCHSFCVECLAHLSLV-TPARRRLLCPLCRQPTVLASGQPV 69
Query: 92 AALPPSFLVNQLLDLMSRQRRHII 115
LP V LL L + H+I
Sbjct: 70 TDLPTDTAVLTLLRL---EPHHVI 90
>MGI|MGI:1923322 [details] [associations]
symbol:Rnf183 "ring finger protein 183" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1923322 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL732594 EMBL:CH466527 CTD:138065
eggNOG:NOG238146 GeneTree:ENSGT00530000063798 HOGENOM:HOG000082461
HOVERGEN:HBG093908 OMA:LEGHQLC OrthoDB:EOG4DNF5H EMBL:AK017982
EMBL:BC025512 IPI:IPI00154050 RefSeq:NP_705724.1 UniGene:Mm.169565
ProteinModelPortal:Q8QZS5 SMR:Q8QZS5 PhosphoSite:Q8QZS5
PRIDE:Q8QZS5 Ensembl:ENSMUST00000079420 Ensembl:ENSMUST00000107454
Ensembl:ENSMUST00000107455 GeneID:76072 KEGG:mmu:76072
UCSC:uc008tes.1 InParanoid:Q8QZS5 NextBio:344545 Bgee:Q8QZS5
CleanEx:MM_RNF183 Genevestigator:Q8QZS5
GermOnline:ENSMUSG00000063851 Uniprot:Q8QZS5
Length = 190
Score = 116 (45.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 33 CGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG-V 91
C C ++ HTPK+L C H+ C+ CL+ ++ T L CP+CR+ + G V
Sbjct: 13 CPVCWNPFNNTFHTPKVLDCCHSFCVECLAHLSLV-TPARRRLLCPLCRQPTVLASGQPV 71
Query: 92 AALPPSFLVNQLLDLMSRQRRHII 115
LP +L L+ + H+I
Sbjct: 72 TDLPTD---TAMLTLLRLEPHHVI 92
>FB|FBgn0026206 [details] [associations]
symbol:mei-P26 "mei-P26" species:7227 "Drosophila
melanogaster" [GO:0007281 "germ cell development" evidence=IGI]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR003649
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0007126 GO:GO:0046872 EMBL:AE014298 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0005622 GO:GO:0007281
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013017
PROSITE:PS51125 InterPro:IPR017907 GeneTree:ENSGT00550000074377
HSSP:Q8MQJ9 OMA:PMQIRCK EMBL:BT025212 RefSeq:NP_652022.1
UniGene:Dm.3139 SMR:Q9W378 IntAct:Q9W378 MINT:MINT-1617617
STRING:Q9W378 EnsemblMetazoa:FBtr0071303 EnsemblMetazoa:FBtr0333473
EnsemblMetazoa:FBtr0333475 GeneID:45775 KEGG:dme:Dmel_CG12218
UCSC:CG12218-RA CTD:45775 FlyBase:FBgn0026206 InParanoid:Q9W378
OrthoDB:EOG41JWT2 GenomeRNAi:45775 NextBio:838320 Uniprot:Q9W378
Length = 1189
Score = 116 (45.9 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 75 LRCPICREQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQE--LLFCETC 132
+ CP+C+++ + G+ ALP ++V +LDL + + HI+ C++ S+E + C C
Sbjct: 221 IECPVCKQETPLGPKGIKALPCDYIVTNILDLSNLESEHIV--CTSCKSKEEAISRCNDC 278
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKS-N 191
C C H H ++ K + + L+ + K CP+ S N
Sbjct: 279 ANFLCNGCDNA--HKYMRCFENHHVVRIEDLTKNVHDKLI------IHKPVFCPQHVSEN 330
Query: 192 LR 193
L+
Sbjct: 331 LK 332
Score = 54 (24.1 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 47 PKLLPCSHTVCLHCLSRIAASQT 69
P++L C H C CL + + T
Sbjct: 171 PRILSCLHVFCEDCLQAVVSKDT 193
Score = 40 (19.1 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 203 VRRRGAHTQTPPLFSHGLSPLSLPDS 228
V RG+ + L S SP+SLP S
Sbjct: 606 VGHRGSSSVQGRLTSAVFSPISLPSS 631
>UNIPROTKB|E1BKE6 [details] [associations]
symbol:TRIM43B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00670000097491 EMBL:DAAA02062434 EMBL:DAAA02062435
IPI:IPI00692821 Ensembl:ENSBTAT00000012117 OMA:TIFCEAN
Uniprot:E1BKE6
Length = 449
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 51/193 (26%), Positives = 81/193 (41%)
Query: 24 EDFNESFLTCGTCL-CMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICRE 82
E F + LTC CL + D P + C H+ C CL + Q + + CP+CR+
Sbjct: 7 EAFQKE-LTCLVCLNFLLD-----PVTIGCGHSFCRSCLC-LFWEQAKVPAS--CPVCRQ 57
Query: 83 QITIPRGGVAALPPSFLVNQLLDLMSRQR-RHIIP----KCSTHNSQELLFCETCDTVFC 137
R + SFL+ L+ + + R + C+TH ++ +FCE ++ C
Sbjct: 58 -----RSEQTSFKTSFLLKNLVSTVRKASFRQFLKCEEHLCATHKQKKTIFCEANKSMVC 112
Query: 138 LQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAH 197
L C+ G H + H + A + E L A + S + E + NL+ S+
Sbjct: 113 LVCSQGQEHKT----QRHCLA--EEAAEESWEKL---AKQMTSLWEKIQETERNLKKSSR 163
Query: 198 KADA---YVRRRG 207
D YV R G
Sbjct: 164 GTDPGWFYVYRHG 176
>UNIPROTKB|D2H788 [details] [associations]
symbol:RNF182 "E3 ubiquitin-protein ligase RNF182"
species:9646 "Ailuropoda melanoleuca" [GO:0016567 "protein
ubiquitination" evidence=ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0043231
GO:GO:0016021 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GeneTree:ENSGT00530000063683 EMBL:GL192549
RefSeq:XP_002917648.1 Ensembl:ENSAMET00000022120 GeneID:100469497
KEGG:aml:100469497 CTD:221687 HOGENOM:HOG000261678 KO:K11983
OMA:CLPDNPT Uniprot:D2H788
Length = 247
Score = 119 (46.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ + PK+L C H VC CL +I G + CP CR + +P
Sbjct: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDEE 77
Query: 91 VAALPP--SFLVN 101
V++LP + LVN
Sbjct: 78 VSSLPDDSNILVN 90
>RGD|1586262 [details] [associations]
symbol:Rnf207 "ring finger protein 207" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Pfam:PF00097 RGD:1586262
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:388591
OrthoDB:EOG4QVCBS GeneTree:ENSGT00510000048612 IPI:IPI00561481
RefSeq:XP_001075996.1 Ensembl:ENSRNOT00000046552 GeneID:691246
KEGG:rno:691246 UCSC:RGD:1586262 NextBio:742655 Uniprot:D4A306
Length = 635
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 37/116 (31%), Positives = 51/116 (43%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y EH P LL C H C CL A G L CP+C+ Q + G
Sbjct: 23 LVCPLCHTQY---EH-PCLLDCFHDFCAGCLRGRATD-----GRLSCPLCQHQTLVK--G 71
Query: 91 VAALPPS-----FLVNQLLD-LMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQC 140
+ LPP+ FLV+ D + + + +CS +++ FC TC C +C
Sbjct: 72 PSGLPPADRLLQFLVDSSGDGIEAVHCANCDLECSKQDAETTYFCNTCGQPLCARC 127
>UNIPROTKB|Q13049 [details] [associations]
symbol:TRIM32 "E3 ubiquitin-protein ligase TRIM32"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043621 "protein self-association" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005863 "striated muscle
myosin thick filament" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0045862 "positive regulation
of proteolysis" evidence=IDA] [GO:0045787 "positive regulation of
cell cycle" evidence=IDA] [GO:0030307 "positive regulation of cell
growth" evidence=IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0030957 "Tat protein binding"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0009411 "response to UV" evidence=ISS] [GO:0034612 "response to
tumor necrosis factor" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISS] [GO:0050769 "positive
regulation of neurogenesis" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:2000147 "positive regulation of cell motility"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0031369
"translation initiation factor binding" evidence=ISS] [GO:0048147
"negative regulation of fibroblast proliferation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0009411 GO:GO:0043066 GO:GO:0030307 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270 GO:GO:0045087
GO:GO:0003723 GO:GO:0043621 GO:GO:0003713 GO:GO:0050769
GO:GO:0017022 GO:GO:0034612 GO:GO:0030335 GO:GO:0045666
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048147
GO:GO:0004842 GO:GO:0045862 GO:GO:0045444 GO:GO:0045732
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GO:GO:0042787 MIM:209900 Orphanet:110 GO:GO:0043130 GO:GO:0045787
EMBL:AL133284 GO:GO:0031369 GO:GO:0005863 GO:GO:0030957 EMBL:U18543
EMBL:BC003154 IPI:IPI00297113 RefSeq:NP_001093149.1
RefSeq:NP_036342.2 UniGene:Hs.591910 PDB:2CT2 PDBsum:2CT2
ProteinModelPortal:Q13049 SMR:Q13049 IntAct:Q13049
MINT:MINT-2854880 STRING:Q13049 PhosphoSite:Q13049 DMDM:20178303
PaxDb:Q13049 PRIDE:Q13049 DNASU:22954 Ensembl:ENST00000373983
Ensembl:ENST00000450136 GeneID:22954 KEGG:hsa:22954 UCSC:uc004bjw.2
CTD:22954 GeneCards:GC09P119449 HGNC:HGNC:16380 HPA:HPA050060
MIM:254110 MIM:602290 neXtProt:NX_Q13049 Orphanet:1878
PharmGKB:PA38130 eggNOG:NOG269289 HOGENOM:HOG000120114
HOVERGEN:HBG060344 InParanoid:Q13049 KO:K10607 OMA:RLPRQFC
OrthoDB:EOG4QZ7KF PhylomeDB:Q13049 EvolutionaryTrace:Q13049
GenomeRNAi:22954 NextBio:43741 ArrayExpress:Q13049 Bgee:Q13049
CleanEx:HS_TRIM32 Genevestigator:Q13049 GermOnline:ENSG00000119401
Uniprot:Q13049
Length = 653
Score = 124 (48.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+N + E L C C+ + + PKLL C HT+C CL ++ AS G +RCP C
Sbjct: 9 LNLDALRE-VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--G-VRCPFC 64
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKC-STHNSQELLFCETCDTVFCLQ 139
+ I + L + V +++D + C S FC +C V C
Sbjct: 65 SKITRIT--SLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGLVLCEP 122
Query: 140 C 140
C
Sbjct: 123 C 123
Score = 40 (19.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 186 PERKSNLRPSAHKADAYVRRRGAHTQTPPLFSHGLSPLSLPDSSHALLITRRAY 239
PE SN++ ++++ GA TP +F+ +S L + L+ R Y
Sbjct: 346 PEAASNIQQCL-----FLKKMGAKGSTPGMFNLPVS-LYVTSQGEVLVADRGNY 393
>MGI|MGI:3647365 [details] [associations]
symbol:Trim43c "tripartite motif-containing 43C"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
MGI:MGI:3647365 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 KO:K12019
GeneTree:ENSGT00670000097491 EMBL:CT030259 EMBL:CT030651
IPI:IPI00756762 RefSeq:NP_001171329.1 UniGene:Mm.446951
ProteinModelPortal:P86449 SMR:P86449 PRIDE:P86449
Ensembl:ENSMUST00000163255 GeneID:666731 KEGG:mmu:666731
UCSC:uc009qyv.1 CTD:666731 HOGENOM:HOG000234135 OMA:WSYPAGS
NextBio:430685 Bgee:P86449 Uniprot:P86449
Length = 446
Score = 123 (48.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 51/203 (25%), Positives = 81/203 (39%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N +D E LTC C ++ P L C H C CL Q CP CR
Sbjct: 5 NLQDPQEETLTCSICQGIF----MDPVYLRCGHKFCETCLLLF---QEDIKFPAYCPTCR 57
Query: 82 EQITIPR-GGVAALPPSFLVNQ--LLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCL 138
+ ++ F+V + L++ ++ + H KC TH +++++FC+ + C
Sbjct: 58 QPCNQRYINDISLKKQVFIVRKKRLMEYLNSEE-H---KCVTHKAKKMIFCDKSKILLCH 113
Query: 139 QCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEILLYKANEC-----VSKNKVCPERKSNLR 193
C+ HS HT +A++ E LL + + +N V ER+ L
Sbjct: 114 LCSDSQEHSG------HTHCSIDVAVQEKMEELLKHMDSLWQRLKIQQNYVEKERRMTLW 167
Query: 194 -PSAHKADAYVRRRGAHTQTPPL 215
+ K V +R Q PPL
Sbjct: 168 WLKSVKLREEVIKRVYGKQCPPL 190
>ZFIN|ZDB-GENE-081030-9 [details] [associations]
symbol:trim35-35 "tripartite motif containing 35-35"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00801454 RefSeq:XP_003201191.1
Ensembl:ENSDART00000074139 GeneID:100534748 KEGG:dre:100534748
Uniprot:F1QZ49
Length = 450
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 50/185 (27%), Positives = 72/185 (38%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQIT--IP- 87
LTC C ++ TP LL CSH+ C CL + S+ T CP+CR + + P
Sbjct: 9 LTCPVCQDIFK----TPVLLSCSHSFCKECLQQFWISKN----TQECPVCRRRSSKDYPP 60
Query: 88 -RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNH 146
G+ + SFL + + S I CS H+ + LFC CL C H
Sbjct: 61 INLGLKNVCESFL-KERNESRSSGSEEI---CSLHSEKLKLFCLEDKQPVCLVCRDSEKH 116
Query: 147 SSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRRR 206
+HT P S E L K K+ E K +A +++ +
Sbjct: 117 L------KHTFRPISEMAPAKKEELNTALKSLQEKCKLNEEMKREFEKTAQ----HIKAQ 166
Query: 207 GAHTQ 211
HT+
Sbjct: 167 AEHTE 171
>UNIPROTKB|G5E5K7 [details] [associations]
symbol:TRIM49 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00670000097491 OMA:NDSWARE EMBL:DAAA02062394
ProteinModelPortal:G5E5K7 PRIDE:G5E5K7 Ensembl:ENSBTAT00000023900
NextBio:20900389 Uniprot:G5E5K7
Length = 451
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 51/173 (29%), Positives = 72/173 (41%)
Query: 28 ESFLTCGTCL-CMYDGGEHTPKLLPCSHTVCLHCLSRI-AASQTRETGTLRCPICREQIT 85
+S LTC C C D P + C H+ C CLS SQT + CP CRE
Sbjct: 10 QSELTCSICTKCFLD-----PVTIDCGHSFCRPCLSLCWEESQTPRS----CPECRE--- 57
Query: 86 IPRGGVAALPPSFLVNQLLDLMSRQRR----HIIPK--CSTHNSQELLFCETCDTVFCLQ 139
IP + + + +L L +RQ R H + C TH + LFCE TV C
Sbjct: 58 IPEW--SDFKTNIALKRLASL-ARQARADHDHSSEEQICVTHQEAKGLFCEVDQTVLCGP 114
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIA--IKRMSEILLYKANECVSKNKVCPERKS 190
C+ H++ S H S +KRM + + +S N+ + +S
Sbjct: 115 CSECPEHAAHSHSPIHRAAEESREKLVKRMRTLWKLREEMKISLNQEANKTQS 167
>ZFIN|ZDB-GENE-071004-80 [details] [associations]
symbol:zgc:171260 "zgc:171260" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-071004-80
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG285726 HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8
EMBL:BC152517 IPI:IPI00998622 RefSeq:NP_001103307.1
UniGene:Dr.152815 ProteinModelPortal:A7MD79 GeneID:100126109
KEGG:dre:100126109 HOVERGEN:HBG106887 NextBio:20788971
Uniprot:A7MD79
Length = 452
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 45/182 (24%), Positives = 72/182 (39%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
LTC C ++ TP LL CSH+ C CL + R T CP+CR + +
Sbjct: 9 LTCPVCQDIFK----TPVLLSCSHSFCKECLQQF----WRSKNTQECPVCRRRSSKDYPP 60
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
+ + + L + R+ CS H+ + LFC CL C H
Sbjct: 61 INLALKNLCESYLKERNERRSSGSEEICSLHSEKLKLFCLEDKQPVCLVCRDSEKHL--- 117
Query: 151 GDSEHTIIPFSIAIKRMSEILLYKANECVS-KNKVCPERKSNLRPSAHKADAYVRRRGAH 209
+HT P S + ++ L A + + K K+ E K +A +++ + H
Sbjct: 118 ---KHTFRPIS-EVAPAKKVELNTALKSLQEKCKLNEEMKREFEKTAQ----HIKAQAEH 169
Query: 210 TQ 211
T+
Sbjct: 170 TE 171
>UNIPROTKB|I3L6F2 [details] [associations]
symbol:LOC100623212 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00502 SMART:SM00557 Pfam:PF00097
Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR017907
GeneTree:ENSGT00550000074377 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 Ensembl:ENSSSCT00000031513 Uniprot:I3L6F2
Length = 532
Score = 87 (35.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQLL--DLMSRQRRHIIPKCSTHNSQELL 127
+ G L CP+C Q+ +P GGV AL L +N ++ L + + CS ++
Sbjct: 89 QIGIL-CPVCDAQVDLPMGGVKALTIDHLAMNDVMLESLRGEGQGLVCDLCSDREVEKR- 146
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
C+TC C C H + HT++ +K S++
Sbjct: 147 -CQTCKANLCHFCCQA--HRRQKKTTYHTMVDLK-DLKGYSQV 185
Score = 80 (33.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 37 LCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
LCM G TP+LLPC HTVC CL ++
Sbjct: 31 LCM--GLFKTPRLLPCLHTVCTTCLEQL 56
>UNIPROTKB|F1N2S5 [details] [associations]
symbol:SH3RF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00018
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR001452
PROSITE:PS50002 PROSITE:PS50089 SMART:SM00184 SMART:SM00326
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
SUPFAM:SSF50044 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101886 KO:K12171
CTD:344558 OMA:PTHDPQV EMBL:DAAA02031033 IPI:IPI00717204
RefSeq:XP_002691322.1 RefSeq:XP_872420.3 UniGene:Bt.37578
ProteinModelPortal:F1N2S5 Ensembl:ENSBTAT00000055080 GeneID:615501
KEGG:bta:615501 NextBio:20899646 Uniprot:F1N2S5
Length = 844
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/91 (42%), Positives = 48/91 (52%)
Query: 25 DFNES----FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
D +ES L C CL D T K+LPC HT C CL I +S+ RE LRCP C
Sbjct: 29 DMDESSLLDLLECSVCLERLDT---TAKVLPCQHTFCRRCLESIVSSR-RE---LRCPEC 81
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
R + GV LP + L+ +LLD + RQR
Sbjct: 82 RILVGC---GVDELPANILLVRLLDGI-RQR 108
>UNIPROTKB|Q2Q1W2 [details] [associations]
symbol:TRIM71 "E3 ubiquitin-protein ligase TRIM71"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:2000637 "positive regulation of gene silencing by miRNA"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0008543 "fibroblast growth factor receptor
signaling pathway" evidence=ISS] [GO:0010586 "miRNA metabolic
process" evidence=ISS] [GO:0021915 "neural tube development"
evidence=ISS] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0060964 "regulation
of gene silencing by miRNA" evidence=ISS] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0035198 "miRNA
binding" evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 InterPro:IPR001298 Pfam:PF00643 Pfam:PF01436
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
SMART:SM00557 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0008543
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0001843 GO:GO:0035198 GO:GO:0010586
GO:GO:0000932 GO:GO:0035278 GO:GO:0004842 GO:GO:0021915
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GO:GO:0051865 GO:GO:0072089 InterPro:IPR017868
Pfam:PF00630 GO:GO:0060964 PROSITE:PS50194 OMA:PETDFQI
GO:GO:2000177 KO:K12035 CTD:131405 HOGENOM:HOG000006755
HOVERGEN:HBG081916 OrthoDB:EOG4894KX EMBL:DQ232881 IPI:IPI00719053
RefSeq:NP_001034200.1 UniGene:Hs.567678 HSSP:P21333
ProteinModelPortal:Q2Q1W2 SMR:Q2Q1W2 STRING:Q2Q1W2
PhosphoSite:Q2Q1W2 DMDM:121941685 PaxDb:Q2Q1W2 PRIDE:Q2Q1W2
Ensembl:ENST00000383763 GeneID:131405 KEGG:hsa:131405
UCSC:uc003cff.3 GeneCards:GC03P032859 HGNC:HGNC:32669 HPA:HPA038142
neXtProt:NX_Q2Q1W2 PharmGKB:PA144596246 InParanoid:Q2Q1W2
GenomeRNAi:131405 NextBio:82904 Bgee:Q2Q1W2 CleanEx:HS_TRIM71
Genevestigator:Q2Q1W2 Uniprot:Q2Q1W2
Length = 868
Score = 102 (41.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 49 LLPCSHTVCLHCLS--RIAASQTRETGT---LRCPICREQITIPRG-GVAALPPS-FLVN 101
+LPC H C CL R+ A+ G LRCP+C +++ + G+ ALP S FL++
Sbjct: 58 VLPCLHAFCRPCLEAHRLPAAGGGAAGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLS 117
Query: 102 QLLD 105
LLD
Sbjct: 118 NLLD 121
Score = 68 (29.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN--HS 147
C H+ + L L+C+TC C +CT G + HS
Sbjct: 278 CQHHDDEVLHLYCDTCSVPICRECTMGRHGGHS 310
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 116 (45.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 39/164 (23%), Positives = 64/164 (39%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C CL+ + G CP+CR P
Sbjct: 13 VTCPICLELLT----QPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ-PENI 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
+ +V +L ++ + C+ H + LLFC+ V C C H
Sbjct: 68 RPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRG-- 125
Query: 151 GDSEHTIIPFSIAIKRMSEILLYKANECV-SKNKVCPERKSNLR 193
HT + +A R ++ L A E + K + E ++++R
Sbjct: 126 ---HHTFLTEEVA--REYQVKLQAALEMLRQKQQEAEELEADIR 164
>UNIPROTKB|C9JNJ4 [details] [associations]
symbol:SH3RF3 "SH3 domain-containing RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00018 InterPro:IPR001841 InterPro:IPR001452
PRINTS:PR00452 PROSITE:PS50002 PROSITE:PS50089 SMART:SM00184
SMART:SM00326 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR000108 PRINTS:PR00499 SUPFAM:SSF50044 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOGENOM:HOG000045564
EMBL:AC010906 EMBL:AC139850 EMBL:AC109344 IPI:IPI00738974
HGNC:HGNC:24699 EMBL:AC133109 EMBL:AC153804 EMBL:AC233025
ProteinModelPortal:C9JNJ4 SMR:C9JNJ4 STRING:C9JNJ4 PRIDE:C9JNJ4
Ensembl:ENST00000418513 ArrayExpress:C9JNJ4 Bgee:C9JNJ4
Uniprot:C9JNJ4
Length = 716
Score = 125 (49.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/92 (41%), Positives = 46/92 (50%)
Query: 24 EDFNES----FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
ED +ES L C CL D T K+LPC HT C CL I S+ LRCP
Sbjct: 44 EDMDESSLLDLLECSVCLERLDT---TAKVLPCQHTFCRRCLESIVCSRHE----LRCPE 96
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
CR + GV LP + L+ +LLD + RQR
Sbjct: 97 CRILVGC---GVDELPANILLVRLLDGI-RQR 124
>UNIPROTKB|Q2YEM9 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9600 "Pongo pygmaeus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HSSP:Q9CQJ4
HOVERGEN:HBG001357 HOGENOM:HOG000234134 GO:GO:0031664
eggNOG:NOG253216 UniGene:Pab.19510 EMBL:AY899900 EMBL:AY899894
EMBL:AY899895 EMBL:AY899896 EMBL:AY899897 EMBL:AY899898
EMBL:AY899899 EMBL:AY843513 EMBL:AY923179 EMBL:CR857231
EMBL:AY710302 EMBL:DQ437601 ProteinModelPortal:Q2YEM9 SMR:Q2YEM9
STRING:Q2YEM9 Uniprot:Q2YEM9
Length = 493
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 40/164 (24%), Positives = 66/164 (40%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C CL+ T + G CP+CR P+
Sbjct: 13 VTCPICLELLT----QPLSLDCGHSFCQACLTANHKKSTLDKGERSCPVCRVSYQ-PKNI 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
+ +V +L ++ + C+ H + LLFC+ V C C H
Sbjct: 68 RPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCKEDGKVICWLCERSQEHRG-- 125
Query: 151 GDSEHTIIPFSIAIKRMSEILLYKANECV-SKNKVCPERKSNLR 193
HT + +A K ++ L A E + K + E ++++R
Sbjct: 126 ---HHTFLTEEVAQKY--QVKLQAALEMLRQKQQEAEELEADIR 164
>UNIPROTKB|Q5C8T8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9601 "Pongo abelii" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HSSP:Q13049
HOVERGEN:HBG001357 GO:GO:0031664 CTD:85363 KO:K10648 EMBL:AY740618
RefSeq:NP_001124542.1 UniGene:Pab.19510 ProteinModelPortal:Q5C8T8
SMR:Q5C8T8 GeneID:100137088 KEGG:pon:100137088 Uniprot:Q5C8T8
Length = 493
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 40/164 (24%), Positives = 66/164 (40%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C CL+ T + G CP+CR P+
Sbjct: 13 VTCPICLELLT----QPLSLDCGHSFCQACLTANHKKSTLDKGERSCPVCRVSYQ-PKNI 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
+ +V +L ++ + C+ H + LLFC+ V C C H
Sbjct: 68 RPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCKEDGKVICWLCERSQEHRG-- 125
Query: 151 GDSEHTIIPFSIAIKRMSEILLYKANECV-SKNKVCPERKSNLR 193
HT + +A K ++ L A E + K + E ++++R
Sbjct: 126 ---HHTFLTEEVAQKY--QVKLQAALEMLRQKQQEAEELEADIR 164
>UNIPROTKB|Q1ACD5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9490 "Saguinus oedipus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229285 ProteinModelPortal:Q1ACD5 SMR:Q1ACD5
Uniprot:Q1ACD5
Length = 494
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/144 (26%), Positives = 59/144 (40%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C C++ T G CP+CR ++ P
Sbjct: 13 VTCPICLELLT----EPLSLDCGHSFCQACITANHKESTPHQGERSCPLCR--MSYPSEN 66
Query: 91 VAALPPSFLVN---QLLDLM-SRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNH 146
+ P L N +L ++M S ++ + C+ H + LLFCE V C C H
Sbjct: 67 LR--PNRHLANIVERLKEVMLSPEKGQKVGHCARHGEKLLLFCEQDGNVICWLCERSQEH 124
Query: 147 SSTSGDSEHTIIPFSIAIKRMSEI 170
HT + +A K ++
Sbjct: 125 RG-----HHTFLVEEVAEKYQEKL 143
>UNIPROTKB|Q5C8U1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:78454 "Saguinus labiatus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740615 EMBL:AY843518
ProteinModelPortal:Q5C8U1 SMR:Q5C8U1 Uniprot:Q5C8U1
Length = 494
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/144 (26%), Positives = 59/144 (40%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C C++ T G CP+CR ++ P
Sbjct: 13 VTCPICLELLT----EPLSLDCGHSFCQACITANHKESTPHQGERSCPLCR--MSYPSEN 66
Query: 91 VAALPPSFLVN---QLLDLM-SRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNH 146
+ P L N +L ++M S + + C+ H + LLFCE V C C H
Sbjct: 67 LR--PNRHLANIVERLKEVMLSPEEGQKVGHCARHGEKLLLFCEQDGNVICWLCERSQEH 124
Query: 147 SSTSGDSEHTIIPFSIAIKRMSEI 170
HT++ +A K ++
Sbjct: 125 RG-----HHTLLVEEVAEKYQEKL 143
>UNIPROTKB|B0V297 [details] [associations]
symbol:TRIM27 "Zinc finger protein RFP" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
UniGene:Hs.440382 HGNC:HGNC:9975 ChiTaRS:TRIM27 EMBL:CR936876
EMBL:CR936883 EMBL:CR936965 IPI:IPI00893697 SMR:B0V297
Ensembl:ENST00000430891 Ensembl:ENST00000436621
Ensembl:ENST00000437415 Ensembl:ENST00000455861 Uniprot:B0V297
Length = 249
Score = 118 (46.6 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 41/144 (28%), Positives = 59/144 (40%)
Query: 32 TCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGV 91
TC CL + E P +L C H +C CL+R T ET + CP CRE T P+ +
Sbjct: 15 TCPVCLQYF--AE--PMMLDCGHNICCACLARCWG--TAETN-VSCPQCRE--TFPQRHM 65
Query: 92 AALPPSFLVN--QLLDLMSRQRRH----IIPKCSTHNSQELLFCETCDTVFCLQCTGGSN 145
P L N QL+ + +R + C H L+CE C+ C
Sbjct: 66 R--PNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDRSRE 123
Query: 146 HSSTSGDSEHTIIPFSIAIKRMSE 169
H H+++P A++ E
Sbjct: 124 HRG------HSVLPLEEAVEGFKE 141
>UNIPROTKB|I3LPZ1 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070206 "protein trimerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00690000101646 OMA:WAICWSS
EMBL:FP102554 Ensembl:ENSSSCT00000024949 Uniprot:I3LPZ1
Length = 502
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 40/150 (26%), Positives = 59/150 (39%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E L+C CL ++ P + C H C CL R A + CP CR
Sbjct: 4 EDLQEE-LSCSICLDYFED----PVSIECGHNFCRDCLRRGLAQGCNQ---FPCPECRRP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
T P +AL P++ + +L R+R + C H LFCE + C+ C
Sbjct: 56 ST-P----SALRPNWALARLAQKARRRREGPASRGLCDRHGEPLRLFCEDDQRLMCMVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIKRMSEIL 171
H + HT+ P A + ++
Sbjct: 111 ESQEHQA------HTMAPMDEAFQSYRRLI 134
>UNIPROTKB|K7GLN7 [details] [associations]
symbol:LOC100623212 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR001298
InterPro:IPR003649 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00502 SMART:SM00557
Pfam:PF00097 Prosite:PS00518 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR017907 GeneTree:ENSGT00550000074377
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CU207228
RefSeq:XP_001929378.1 Ensembl:ENSSSCT00000033116 GeneID:100157373
Uniprot:K7GLN7
Length = 580
Score = 87 (35.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQLL--DLMSRQRRHIIPKCSTHNSQELL 127
+ G L CP+C Q+ +P GGV AL L +N ++ L + + CS ++
Sbjct: 89 QIGIL-CPVCDAQVDLPMGGVKALTIDHLAMNDVMLESLRGEGQGLVCDLCSDREVEKR- 146
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
C+TC C C H + HT++ +K S++
Sbjct: 147 -CQTCKANLCHFCCQA--HRRQKKTTYHTMVDLK-DLKGYSQV 185
Score = 80 (33.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 37 LCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
LCM G TP+LLPC HTVC CL ++
Sbjct: 31 LCM--GLFKTPRLLPCLHTVCTTCLEQL 56
>UNIPROTKB|E1C348 [details] [associations]
symbol:RNF207 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00510000048612
EMBL:AADN02040932 IPI:IPI00587252 Ensembl:ENSGALT00000001006
ArrayExpress:E1C348 Uniprot:E1C348
Length = 559
Score = 123 (48.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 38/131 (29%), Positives = 54/131 (41%)
Query: 36 CLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALP 95
CL + G P LL C H C CL AAS G LRCP+C ++ RGG P
Sbjct: 25 CLLCH-GPFQQPCLLDCYHAFCASCLRGRAAS-----GRLRCPLCGHP-SVVRGGTGLPP 77
Query: 96 PSFLVNQLLDLMSR-----QRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
L+ L+D + Q + C+ + + FC TC C C ++ +
Sbjct: 78 VDRLLQFLVDSSAEGSEDAQCANCDRLCAEADLDTMCFCNTCSQPLCAPCREETHRAKVF 137
Query: 151 GDSEHTIIPFS 161
+ H I+ S
Sbjct: 138 --ARHEIVSLS 146
>UNIPROTKB|F1RNQ5 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:FP102554
Ensembl:ENSSSCT00000008377 Uniprot:F1RNQ5
Length = 474
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 40/144 (27%), Positives = 57/144 (39%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E L+C CL ++ P + C H C CL R A + CP CR
Sbjct: 4 EDLQEE-LSCSICLDYFED----PVSIECGHNFCRDCLRRGLAQGCNQ---FPCPECRRP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
T P +AL P++ + +L R+R + C H LFCE + C+ C
Sbjct: 56 ST-P----SALRPNWALARLAQKARRRREGPASRGLCDRHGEPLRLFCEDDQRLMCMVCR 110
Query: 142 GGSNHSSTSGDSEHTIIPFSIAIK 165
H + HT+ P A +
Sbjct: 111 ESQEHQA------HTMAPMDEAFQ 128
>MGI|MGI:1917057 [details] [associations]
symbol:Trim32 "tripartite motif-containing 32" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005863 "striated muscle myosin thick
filament" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009411 "response to UV" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IPI] [GO:0030307 "positive regulation of cell growth"
evidence=ISO] [GO:0030335 "positive regulation of cell migration"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=IPI] [GO:0034612 "response to tumor necrosis factor"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;NAS] [GO:0043130 "ubiquitin binding" evidence=ISO]
[GO:0043621 "protein self-association" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=IDA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IDA] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050769 "positive regulation of neurogenesis" evidence=IDA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IDA] [GO:2000147 "positive regulation of cell
motility" evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 MGI:MGI:1917057
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0009411
GO:GO:0043066 GO:GO:0030307 GO:GO:0046872 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 GO:GO:0003723 GO:GO:0043621
GO:GO:0050769 GO:GO:0034612 GO:GO:0030335 GO:GO:0045666
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048147
GO:GO:0004842 GO:GO:0045862 GO:GO:0045444 GO:GO:0045732
InterPro:IPR013017 PROSITE:PS51125 GO:GO:0000209 InterPro:IPR017907
GO:GO:0042787 GO:GO:0043130 GO:GO:0045787 EMBL:AL691456
GeneTree:ENSGT00550000074377 CTD:22954 eggNOG:NOG269289
HOGENOM:HOG000120114 HOVERGEN:HBG060344 KO:K10607 OMA:RLPRQFC
OrthoDB:EOG4QZ7KF EMBL:AF347694 EMBL:BC034104 IPI:IPI00321005
RefSeq:NP_001155254.1 RefSeq:NP_444314.2 UniGene:Mm.22786
ProteinModelPortal:Q8CH72 SMR:Q8CH72 IntAct:Q8CH72 STRING:Q8CH72
PhosphoSite:Q8CH72 PaxDb:Q8CH72 PRIDE:Q8CH72
Ensembl:ENSMUST00000050850 Ensembl:ENSMUST00000107366 GeneID:69807
KEGG:mmu:69807 InParanoid:Q8CH72 NextBio:330382 Bgee:Q8CH72
Genevestigator:Q8CH72 GermOnline:ENSMUSG00000051675 Uniprot:Q8CH72
Length = 655
Score = 121 (47.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 33/121 (27%), Positives = 51/121 (42%)
Query: 21 INYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPIC 80
+N + E L C C+ + + PKLL C HT+C CL ++ AS G +RCP C
Sbjct: 10 LNLDALRE-VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--G-VRCPFC 65
Query: 81 REQITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQ-ELLFCETCDTVFCLQ 139
+ I + L + V +++D + C + FC +C V C
Sbjct: 66 SKITRIT--SLTQLTDNLTVLKIIDTAGLSEAVGLLMCRGCGRRLPRQFCRSCGVVLCEP 123
Query: 140 C 140
C
Sbjct: 124 C 124
Score = 42 (19.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 187 ERKSNLRPSAHKADAYVRRRGAHTQTPPLFSHGLSPLSLPDSSHALLITRRAY 239
+++S+ S + ++++ GA TP +F+ +S L + S L+ R Y
Sbjct: 344 KQRSSEAASGIQQCLFLKKMGAKGSTPGMFNLPVS-LYVTSQSEVLVADRGNY 395
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 221 SPLSLPDSSHALLITRRAYVRRRGAHTQTPPLFS 254
SP S A I + ++++ GA TP +F+
Sbjct: 341 SPAKQRSSEAASGIQQCLFLKKMGAKGSTPGMFN 374
>ZFIN|ZDB-GENE-030131-5695 [details] [associations]
symbol:trim33l "tripartite motif-containing
33-like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF00643 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-030131-5695 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GeneTree:ENSGT00530000062982
EMBL:CR388365 IPI:IPI00618952 Ensembl:ENSDART00000122433
Bgee:E7FDQ1 Uniprot:E7FDQ1
Length = 1293
Score = 131 (51.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 37/130 (28%), Positives = 55/130 (42%)
Query: 33 CGTCL-CMYDGGEHT-PKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
CGTC C + T PKLLPC HTVC CL++I + + CP C + G
Sbjct: 22 CGTCAACKGHLNDSTEPKLLPCLHTVCNTCLTKICTDGSSQD----CPSCAQSF-----G 72
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELL-FCETCDTVFCLQCTGGSNHSST 149
++ + + L D + PKC E+ +C C+ CL C + H
Sbjct: 73 LSEVTECAIFEDLSD------NNKAPKCGGCEENEVSGWCVQCEEALCLDCV--TAHHRV 124
Query: 150 SGDSEHTIIP 159
+H ++P
Sbjct: 125 KVTRDHEVMP 134
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 221 SPLSLPDSSHALLITRRAYVRRRGAHTQ 248
SPLS+ SH ++ + + H+Q
Sbjct: 455 SPLSVQAQSHEVMSGQSKHAYSPSVHSQ 482
>MGI|MGI:2444637 [details] [associations]
symbol:Sh3rf3 "SH3 domain containing ring finger 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00018 InterPro:IPR001841 InterPro:IPR001452
PRINTS:PR00452 PROSITE:PS50002 PROSITE:PS50089 SMART:SM00184
SMART:SM00326 MGI:MGI:2444637 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR000108 PRINTS:PR00499 SUPFAM:SSF50044
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101886 eggNOG:NOG314495 HOGENOM:HOG000045564
HOVERGEN:HBG069552 KO:K12171 OrthoDB:EOG4PG61S HSSP:Q8C1E3
CTD:344558 OMA:PTHDPQV EMBL:AC153367 EMBL:AC159909 EMBL:AK029202
EMBL:AK132983 EMBL:AK133071 EMBL:BC057304 IPI:IPI00283065
IPI:IPI00653897 IPI:IPI00845734 IPI:IPI00845810 RefSeq:NP_766376.2
UniGene:Mm.333078 UniGene:Mm.410104 ProteinModelPortal:Q8C120
SMR:Q8C120 PhosphoSite:Q8C120 PRIDE:Q8C120
Ensembl:ENSMUST00000135526 Ensembl:ENSMUST00000153031 GeneID:237353
KEGG:mmu:237353 UCSC:uc007fdj.2 UCSC:uc007fdk.2 UCSC:uc007fdl.1
InParanoid:Q8C120 NextBio:383312 Bgee:Q8C120 Genevestigator:Q8C120
Uniprot:Q8C120
Length = 878
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/92 (41%), Positives = 46/92 (50%)
Query: 24 EDFNES----FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
ED +ES L C CL D T K+LPC HT C CL I S+ LRCP
Sbjct: 39 EDMDESSLLDLLECSVCLERLDT---TAKVLPCQHTFCRRCLESIVCSRHE----LRCPE 91
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
CR + GV LP + L+ +LLD + RQR
Sbjct: 92 CRILVGC---GVDELPANILLVRLLDGI-RQR 119
>UNIPROTKB|F1PBV0 [details] [associations]
symbol:SH3RF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00018 InterPro:IPR001841 InterPro:IPR001452 PROSITE:PS50002
PROSITE:PS50089 SMART:SM00184 SMART:SM00326 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 InterPro:IPR000108 PRINTS:PR00499
SUPFAM:SSF50044 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101886 OMA:PTHDPQV
EMBL:AAEX03007390 EMBL:AAEX03007391 EMBL:AAEX03007392
EMBL:AAEX03007393 Ensembl:ENSCAFT00000003111 Uniprot:F1PBV0
Length = 882
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/92 (41%), Positives = 46/92 (50%)
Query: 24 EDFNES----FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
ED +ES L C CL D T K+LPC HT C CL I S+ LRCP
Sbjct: 38 EDMDESSLLDLLECSVCLERLDT---TAKVLPCQHTFCRRCLESIVCSRHE----LRCPE 90
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
CR + GV LP + L+ +LLD + RQR
Sbjct: 91 CRILVGC---GVDELPANILLVRLLDGI-RQR 118
>UNIPROTKB|Q8TEJ3 [details] [associations]
symbol:SH3RF3 "SH3 domain-containing RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00018 InterPro:IPR001841 InterPro:IPR001452
PROSITE:PS50002 PROSITE:PS50089 SMART:SM00184 SMART:SM00326
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR000108
PRINTS:PR00499 SUPFAM:SSF50044 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC140485 eggNOG:NOG314495
HOGENOM:HOG000045564 HOVERGEN:HBG069552 KO:K12171 HSSP:O60504
EMBL:AC010906 EMBL:AC139850 EMBL:AC109344 EMBL:DQ307286
EMBL:AK074131 EMBL:AL831825 IPI:IPI00738974 RefSeq:NP_001092759.1
UniGene:Hs.171244 UniGene:Hs.535157 ProteinModelPortal:Q8TEJ3
SMR:Q8TEJ3 MINT:MINT-2791992 STRING:Q8TEJ3 PhosphoSite:Q8TEJ3
DMDM:146325718 PRIDE:Q8TEJ3 Ensembl:ENST00000309415 GeneID:344558
KEGG:hsa:344558 UCSC:uc010ywt.1 CTD:344558 GeneCards:GC02P109745
H-InvDB:HIX0023401 HGNC:HGNC:24699 neXtProt:NX_Q8TEJ3
PharmGKB:PA162403291 OMA:PTHDPQV GenomeRNAi:344558 NextBio:98704
ArrayExpress:Q8TEJ3 Bgee:Q8TEJ3 CleanEx:HS_SH3RF3
Genevestigator:Q8TEJ3 Uniprot:Q8TEJ3
Length = 882
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/92 (41%), Positives = 46/92 (50%)
Query: 24 EDFNES----FLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPI 79
ED +ES L C CL D T K+LPC HT C CL I S+ LRCP
Sbjct: 44 EDMDESSLLDLLECSVCLERLDT---TAKVLPCQHTFCRRCLESIVCSRHE----LRCPE 96
Query: 80 CREQITIPRGGVAALPPSFLVNQLLDLMSRQR 111
CR + GV LP + L+ +LLD + RQR
Sbjct: 97 CRILVGC---GVDELPANILLVRLLDGI-RQR 124
>UNIPROTKB|Q9C037 [details] [associations]
symbol:TRIM4 "Tripartite motif-containing protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0005886 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
EMBL:CH236956 EMBL:CH471091 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070206 InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 EMBL:AC011904
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AF220023 EMBL:AF220024
EMBL:BC011763 EMBL:BC025949 IPI:IPI00011551 IPI:IPI00030371
IPI:IPI00410582 RefSeq:NP_148977.2 RefSeq:NP_149082.1
UniGene:Hs.50749 ProteinModelPortal:Q9C037 SMR:Q9C037 IntAct:Q9C037
STRING:Q9C037 PhosphoSite:Q9C037 DMDM:209572691 PaxDb:Q9C037
PRIDE:Q9C037 Ensembl:ENST00000349062 Ensembl:ENST00000354241
Ensembl:ENST00000355947 GeneID:89122 KEGG:hsa:89122 UCSC:uc003usd.3
UCSC:uc003use.3 UCSC:uc003usf.3 CTD:89122 GeneCards:GC07M099474
HGNC:HGNC:16275 HPA:HPA019356 HPA:HPA029461 neXtProt:NX_Q9C037
PharmGKB:PA38108 eggNOG:NOG322533 InParanoid:Q9C037 KO:K11998
OMA:ECRHPSA PhylomeDB:Q9C037 GenomeRNAi:89122 NextBio:76224
ArrayExpress:Q9C037 Bgee:Q9C037 CleanEx:HS_TRIM4
Genevestigator:Q9C037 GermOnline:ENSG00000146833 Uniprot:Q9C037
Length = 500
Score = 122 (48.0 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 40/127 (31%), Positives = 51/127 (40%)
Query: 24 EDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQ 83
ED E LTC CL + P + C H C CL R A G CP CR
Sbjct: 4 EDIQEE-LTCPICLDYFQD----PVSIECGHNFCRGCLHRNWAPGG---GPFPCPECRHP 55
Query: 84 ITIPRGGVAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCT 141
+ P AAL P++ + +L + R+R +P C H LFCE CL C
Sbjct: 56 -SAP----AALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCR 110
Query: 142 GGSNHSS 148
H +
Sbjct: 111 ESQEHQT 117
>MGI|MGI:3648996 [details] [associations]
symbol:Trim43b "tripartite motif-containing 43B"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 MGI:MGI:3648996 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 EMBL:CT030686 KO:K12019
GeneTree:ENSGT00670000097491 CTD:653192 IPI:IPI00749606
RefSeq:NP_001164355.1 UniGene:Mm.425592 ProteinModelPortal:P86448
SMR:P86448 PhosphoSite:P86448 PRIDE:P86448
Ensembl:ENSMUST00000167113 GeneID:666747 KEGG:mmu:666747
UCSC:uc012gyb.1 OMA:WQRENIK NextBio:430730 Bgee:P86448
Uniprot:P86448
Length = 445
Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 51/203 (25%), Positives = 81/203 (39%)
Query: 22 NYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICR 81
N +D E LTC C ++ P L C H C CL Q CP+C
Sbjct: 5 NLQDPQEETLTCSICQGIF----MNPVYLKCGHKFCEACLLLF---QEDIKFPAYCPMCM 57
Query: 82 EQITIPRGGVAALPPSFLVNQLLDLMS--RQRRHIIPKCSTHNSQELLFCETCDTVFCLQ 139
+ +L + + LM H KC TH +++++FC+ + C
Sbjct: 58 QPFNQEYINDISLKKQVSIVRKKRLMEYLNSEEH---KCVTHKAKKMIFCDKSKILLCHL 114
Query: 140 CTGGSNHSSTSGDSEHTIIPFSIAIK-RMSEIL-----LYKANECVSKNKVCPERKSNLR 193
C+ HS HT +A++ +M E+L L++ + + +N V ER++ L
Sbjct: 115 CSDSQEHSG------HTHCSIDVAVQEKMEELLKHMDSLWRRLK-IQQNYVEKERRTTLW 167
Query: 194 -PSAHKADAYVRRRGAHTQTPPL 215
+ K V +R Q PPL
Sbjct: 168 WLKSMKLREEVIKRVYGKQCPPL 190
>ZFIN|ZDB-GENE-081030-6 [details] [associations]
symbol:trim35-38 "tripartite motif containing 35-38"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-6 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00859170 Ensembl:ENSDART00000036309
Uniprot:E7F326
Length = 450
Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 45/171 (26%), Positives = 62/171 (36%)
Query: 46 TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
TP +L CSH+ C CL + R T CP+CR R P + + L +
Sbjct: 20 TPVILSCSHSFCKECLQQF----WRNKNTQECPVCRR-----RSSKENPPVNLALQNLCE 70
Query: 106 --LMSRQRRHIIPK---CSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPF 160
L R R I CS H+ + LFC CL C H +HT P
Sbjct: 71 SFLKERNERRISGSEEICSLHSEKLKLFCLEDKQPVCLVCRDSEKHL------KHTFRPI 124
Query: 161 SIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRRRGAHTQ 211
S E L K K+ E K +A +++ + HT+
Sbjct: 125 SEMAPAKKEELNTALKSLQEKCKLNEEMKREFEKTAQ----HIKAQAEHTE 171
>UNIPROTKB|I3L8Y1 [details] [associations]
symbol:TRIM43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00670000097491 OMA:WSYPAGS
EMBL:FP565680 Ensembl:ENSSSCT00000030083 Uniprot:I3L8Y1
Length = 454
Score = 121 (47.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 54/200 (27%), Positives = 80/200 (40%)
Query: 31 LTCGTCL-CMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
LTC CL + D P L C H+ C CL + Q E RCP+CR+Q
Sbjct: 13 LTCLVCLNYLLD-----PVTLGCGHSFCWCCLC-VFWDQAEEPA--RCPVCRQQ-----S 59
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHIIPK-----CSTHNSQELLFCETCDTVFCLQCTGGS 144
L + L+ L+ + K C TH + +FC+ ++ CL C+
Sbjct: 60 EQTNLKTNLLLKNLVSIARNANLFQFLKSEEQWCGTHKEIKEIFCDADKSLLCLLCSQTD 119
Query: 145 NHSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADA--- 201
H GD H +P A + E L AN+ S + E +L+ ++ D+
Sbjct: 120 EH----GDHRH--LPTEEAAEEYWERL---ANQMRSLWEKIQEIDRSLQKNSQGTDSLMF 170
Query: 202 YVRRRG-----AHTQTPPLF 216
Y +RG + PPLF
Sbjct: 171 YAYQRGDMMRKVYQMVPPLF 190
>MGI|MGI:2685973 [details] [associations]
symbol:Trim71 "tripartite motif-containing 71" species:10090
"Mus musculus" [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008543 "fibroblast growth
factor receptor signaling pathway" evidence=IMP] [GO:0010586 "miRNA
metabolic process" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IDA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0035198
"miRNA binding" evidence=IDA] [GO:0035278 "negative regulation of
translation involved in gene silencing by miRNA" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051246
"regulation of protein metabolic process" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0060964 "regulation
of gene silencing by miRNA" evidence=IGI;IMP] [GO:0071310 "cellular
response to organic substance" evidence=IDA] [GO:0072089 "stem cell
proliferation" evidence=IMP] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=IMP] [GO:2000637 "positive
regulation of gene silencing by miRNA" evidence=IMP;IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001258
InterPro:IPR001298 Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 SMART:SM00557
UniPathway:UPA00143 MGI:MGI:2685973 Prosite:PS00518 GO:GO:0008543
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 GO:GO:0001843 GO:GO:0035198 GO:GO:0010586
GO:GO:0000932 GO:GO:0035278 GO:GO:0004842 GO:GO:2000637
eggNOG:COG3391 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GO:GO:0051865 GeneTree:ENSGT00550000074377
GO:GO:0072089 InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
OMA:PETDFQI GO:GO:2000177 KO:K12035 CTD:131405 HOGENOM:HOG000006755
HOVERGEN:HBG081916 OrthoDB:EOG4894KX EMBL:DQ005956 IPI:IPI00668432
RefSeq:NP_001035968.1 UniGene:Mm.17857 ProteinModelPortal:Q1PSW8
SMR:Q1PSW8 STRING:Q1PSW8 PhosphoSite:Q1PSW8 PRIDE:Q1PSW8
Ensembl:ENSMUST00000111816 GeneID:636931 KEGG:mmu:636931
UCSC:uc009rxp.1 InParanoid:Q1PSW8 NextBio:423826 Bgee:Q1PSW8
CleanEx:MM_TRIM71 Genevestigator:Q1PSW8 Uniprot:Q1PSW8
Length = 855
Score = 101 (40.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 49 LLPCSHTVCLHCLS--RIAA---SQTRETGTLRCPICREQITIPRG-GVAALPPS-FLVN 101
+LPC H C CL R+ A + E LRCP+C +++ + G+ ALP S FL++
Sbjct: 57 VLPCLHAFCRPCLEAHRLPAPGGAGPAEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLS 116
Query: 102 QLLDLMSRQRRHIIPK 117
LLD + PK
Sbjct: 117 NLLDAVVATAEEPPPK 132
Score = 67 (28.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN--HS 147
C H+ + L L+C+TC C +CT G + HS
Sbjct: 265 CQHHDDEVLHLYCDTCSVPICRECTLGRHGGHS 297
>UNIPROTKB|Q6GND7 [details] [associations]
symbol:rnf152-a "E3 ubiquitin-protein ligase rnf152-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005764 "lysosome" evidence=ISS]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 GO:GO:0005764 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0070936 EMBL:BC073577
RefSeq:NP_001085944.1 UniGene:Xl.47605 ProteinModelPortal:Q6GND7
GeneID:444373 KEGG:xla:444373 CTD:220441 Xenbase:XB-GENE-1001848
HOVERGEN:HBG054053 Uniprot:Q6GND7
Length = 203
Score = 114 (45.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 31/78 (39%), Positives = 36/78 (46%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
+S L C C Y PKLL C T C CL ++ A Q LRCP CR
Sbjct: 7 DSLLECQICFNYYSP-RRRPKLLDCKRTCCSVCLQQMRACQK----DLRCPWCR------ 55
Query: 88 RGGVAALPPSFLVNQLLD 105
GV LPP + V+QL D
Sbjct: 56 --GVTKLPPGYSVSQLPD 71
>UNIPROTKB|E2RHV3 [details] [associations]
symbol:TRIM23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR005225 InterPro:IPR006689
InterPro:IPR007087 InterPro:IPR024156 Pfam:PF00025 Pfam:PF00643
PRINTS:PR00328 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50157
PROSITE:PS51417 SMART:SM00177 SMART:SM00184 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097997
InterPro:IPR017907 OMA:RAVRCPF EMBL:AAEX03001473
Ensembl:ENSCAFT00000011941 NextBio:20860849 Uniprot:E2RHV3
Length = 572
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHI----------------IPKCSTHNSQEL-LFCETC 132
GV L +F + +LL+ + Q HI I +C + ++C C
Sbjct: 85 GVWGLKKNFALLELLERL--QNGHIGQCGAAEEAIGISGESIIRCDEDEAHVASVYCTVC 142
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C +C+ ++ + T ++H +P +
Sbjct: 143 ATHLCSECSQVTHSTKTL--AKHRRVPLA 169
>RGD|621587 [details] [associations]
symbol:Trim23 "tripartite motif-containing 23" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=ISO;ISS]
[GO:0003924 "GTPase activity" evidence=ISO;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005525
"GTP binding" evidence=IEA;ISO;ISS;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005765 "lysosomal membrane"
evidence=ISO;ISS] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS] [GO:0006471 "protein ADP-ribosylation"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0019003 "GDP binding" evidence=ISO;ISS]
[GO:0042802 "identical protein binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003649
InterPro:IPR005225 InterPro:IPR006689 InterPro:IPR007087
InterPro:IPR024156 Pfam:PF00025 Pfam:PF00643 PRINTS:PR00328
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS51417 SMART:SM00177
SMART:SM00184 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
RGD:621587 Prosite:PS00518 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0007264 GO:GO:0000139 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 GO:GO:0003924 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 eggNOG:COG1100 GO:GO:0006471
InterPro:IPR017907 GO:GO:0019003 KO:K07963 CTD:373
HOVERGEN:HBG000551 OrthoDB:EOG4001HX EMBL:L04760 IPI:IPI00388038
IPI:IPI00569056 RefSeq:NP_001094107.1 UniGene:Rn.6763
ProteinModelPortal:P36407 STRING:P36407 PRIDE:P36407 GeneID:81002
KEGG:rno:81002 UCSC:RGD:621587 InParanoid:P36407 NextBio:614927
ArrayExpress:P36407 Genevestigator:P36407
GermOnline:ENSRNOG00000012354 Uniprot:P36407
Length = 573
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHI----------------IPKCSTHNSQEL-LFCETC 132
GV L +F + +LL+ + Q HI I +C + ++C C
Sbjct: 85 GVWGLKKNFALLELLERL--QNGHIGQYGAAEEALGISGESIIRCDEDEAHVASVYCTVC 142
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C +C+ ++ + T ++H +P +
Sbjct: 143 ATHLCSECSQVTHSTKTL--AKHRRVPLA 169
>UNIPROTKB|F1LSC5 [details] [associations]
symbol:Trim23 "E3 ubiquitin-protein ligase TRIM23"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003649 InterPro:IPR005225
InterPro:IPR006689 InterPro:IPR007087 InterPro:IPR024156
Pfam:PF00025 Pfam:PF00643 PRINTS:PR00328 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS50157 PROSITE:PS51417 SMART:SM00177
SMART:SM00184 SMART:SM00336 SMART:SM00502 RGD:621587
Prosite:PS00518 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0007264 GO:GO:0000139 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GeneTree:ENSGT00670000097997
InterPro:IPR017907 GO:GO:0019003 OMA:RAVRCPF IPI:IPI00569056
Ensembl:ENSRNOT00000016649 ArrayExpress:F1LSC5 Uniprot:F1LSC5
Length = 573
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHI----------------IPKCSTHNSQEL-LFCETC 132
GV L +F + +LL+ + Q HI I +C + ++C C
Sbjct: 85 GVWGLKKNFALLELLERL--QNGHIGQYGAAEEALGISGESIIRCDEDEAHVASVYCTVC 142
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C +C+ ++ + T ++H +P +
Sbjct: 143 ATHLCSECSQVTHSTKTL--AKHRRVPLA 169
>UNIPROTKB|P36407 [details] [associations]
symbol:Trim23 "E3 ubiquitin-protein ligase TRIM23"
species:10116 "Rattus norvegicus" [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR005225 InterPro:IPR006689
InterPro:IPR007087 InterPro:IPR024156 Pfam:PF00025 Pfam:PF00643
PRINTS:PR00328 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS51417
SMART:SM00177 SMART:SM00184 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 RGD:621587 Prosite:PS00518 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0007264 GO:GO:0000139
GO:GO:0005765 GO:GO:0046872 GO:GO:0008270 GO:GO:0003924
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:COG1100
GO:GO:0006471 InterPro:IPR017907 GO:GO:0019003 KO:K07963 CTD:373
HOVERGEN:HBG000551 OrthoDB:EOG4001HX EMBL:L04760 IPI:IPI00388038
IPI:IPI00569056 RefSeq:NP_001094107.1 UniGene:Rn.6763
ProteinModelPortal:P36407 STRING:P36407 PRIDE:P36407 GeneID:81002
KEGG:rno:81002 UCSC:RGD:621587 InParanoid:P36407 NextBio:614927
ArrayExpress:P36407 Genevestigator:P36407
GermOnline:ENSRNOG00000012354 Uniprot:P36407
Length = 573
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHI----------------IPKCSTHNSQEL-LFCETC 132
GV L +F + +LL+ + Q HI I +C + ++C C
Sbjct: 85 GVWGLKKNFALLELLERL--QNGHIGQYGAAEEALGISGESIIRCDEDEAHVASVYCTVC 142
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C +C+ ++ + T ++H +P +
Sbjct: 143 ATHLCSECSQVTHSTKTL--AKHRRVPLA 169
>UNIPROTKB|E1C692 [details] [associations]
symbol:E1C692 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008157 "protein phosphatase 1 binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] Pfam:PF00018 InterPro:IPR001841 InterPro:IPR001452
PROSITE:PS50002 PROSITE:PS50089 SMART:SM00184 SMART:SM00326
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR000108
PRINTS:PR00499 SUPFAM:SSF50044 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR011511 Pfam:PF07653 InterPro:IPR017907 GO:GO:0010923
GeneTree:ENSGT00690000101886 OMA:LFVEPNL EMBL:AADN02028204
EMBL:AADN02028205 EMBL:AADN02028206 EMBL:AADN02028207
EMBL:AADN02047968 IPI:IPI00572970 Ensembl:ENSGALT00000011994
Uniprot:E1C692
Length = 645
Score = 125 (49.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 33/75 (44%), Positives = 40/75 (53%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C D T K+LPC HT C CL RI SQ +E LRCP CR T+ G
Sbjct: 10 LECPVCFEKLDA---TAKVLPCQHTFCKPCLQRILKSQ-KE---LRCPECR---TLVLCG 59
Query: 91 VAALPPSFLVNQLLD 105
+ LP + L+ +LLD
Sbjct: 60 IEQLPANLLLIRLLD 74
Score = 36 (17.7 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 194 PSAHKADAYVRRRGAHTQTPPLFSHG 219
P+A A+ VR +H P L G
Sbjct: 553 PTASTAEVGVRPNFSHEAPPALVVRG 578
>UNIPROTKB|K7GP98 [details] [associations]
symbol:LOC100513958 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR005225 InterPro:IPR006689
InterPro:IPR007087 InterPro:IPR024156 Pfam:PF00025 Pfam:PF00643
PRINTS:PR00328 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50157
PROSITE:PS51417 SMART:SM00177 SMART:SM00184 SMART:SM00336
SMART:SM00502 Prosite:PS00518 TIGRFAMs:TIGR00231 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00670000097997 InterPro:IPR017907
EMBL:CU856268 RefSeq:XP_003134061.2 Ensembl:ENSSSCT00000033510
GeneID:100513958 Uniprot:K7GP98
Length = 574
Score = 122 (48.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHI----------------IPKCSTHNSQ-ELLFCETC 132
GV L +F + +LL+ + Q HI I +C + ++C C
Sbjct: 85 GVWGLKKNFALLELLERL--QNGHIGQYGAAEEAIGISGESIIRCDEDEAHIASVYCTVC 142
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C +C+ ++ + T ++H +P +
Sbjct: 143 ATHLCSECSQVTHSTKTL--AKHRRVPLA 169
>UNIPROTKB|F1SKT5 [details] [associations]
symbol:LOC100513958 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0005765 "lysosomal
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR005225 InterPro:IPR006689
InterPro:IPR007087 InterPro:IPR024156 Pfam:PF00025 Pfam:PF00643
PRINTS:PR00328 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50157
PROSITE:PS51417 SMART:SM00177 SMART:SM00184 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0007264 GO:GO:0000139 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GeneTree:ENSGT00670000097997 InterPro:IPR017907 GO:GO:0019003
OMA:RAVRCPF EMBL:CU856268 Ensembl:ENSSSCT00000018456
ArrayExpress:F1SKT5 Uniprot:F1SKT5
Length = 576
Score = 122 (48.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHI----------------IPKCSTHNSQ-ELLFCETC 132
GV L +F + +LL+ + Q HI I +C + ++C C
Sbjct: 85 GVWGLKKNFALLELLERL--QNGHIGQYGAAEEAIGISGESIIRCDEDEAHIASVYCTVC 142
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C +C+ ++ + T ++H +P +
Sbjct: 143 ATHLCSECSQVTHSTKTL--AKHRRVPLA 169
>RGD|1566388 [details] [associations]
symbol:Trim71 "tripartite motif containing 71, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=ISO;ISS] [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISO;ISS] [GO:0001843
"neural tube closure" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008543 "fibroblast growth
factor receptor signaling pathway" evidence=ISO;ISS] [GO:0010586
"miRNA metabolic process" evidence=ISO;ISS] [GO:0021915 "neural
tube development" evidence=ISO;ISS] [GO:0035198 "miRNA binding"
evidence=ISO;ISS] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISO;ISS] [GO:0051246
"regulation of protein metabolic process" evidence=ISO] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] [GO:0060964
"regulation of gene silencing by miRNA" evidence=ISO;ISS]
[GO:0071310 "cellular response to organic substance" evidence=ISO]
[GO:0072089 "stem cell proliferation" evidence=ISO;ISS] [GO:2000177
"regulation of neural precursor cell proliferation"
evidence=ISO;ISS] [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001258 InterPro:IPR001298
Pfam:PF00643 Pfam:PF01436 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 SMART:SM00557 UniPathway:UPA00143
RGD:1566388 Prosite:PS00518 GO:GO:0008543 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0000082 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296 GO:GO:0001843
GO:GO:0035198 GO:GO:0010586 GO:GO:0000932 GO:GO:0035278
GO:GO:0004842 GO:GO:0021915 InterPro:IPR013017 PROSITE:PS51125
InterPro:IPR017907 GO:GO:0051865 GeneTree:ENSGT00550000074377
GO:GO:0072089 InterPro:IPR017868 Pfam:PF00630 GO:GO:0060964
PROSITE:PS50194 GO:GO:2000177 KO:K12035 OrthoDB:EOG4894KX
IPI:IPI00371134 RefSeq:NP_001178730.1 UniGene:Rn.225076
Ensembl:ENSRNOT00000047198 GeneID:301042 KEGG:rno:301042
UCSC:RGD:1566388 NextBio:647998 Uniprot:D3ZVM4
Length = 855
Score = 100 (40.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 49 LLPCSHTVCLHCLS--RIAA---SQTRETGTLRCPICREQITIPRG-GVAALPPS-FLVN 101
+LPC H C CL R+ A + E LRCP+C +++ + G+ ALP S FL++
Sbjct: 57 VLPCLHAFCRPCLEAHRLPAPGGAGPAEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLS 116
Query: 102 QLLD 105
LLD
Sbjct: 117 NLLD 120
Score = 67 (28.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN--HS 147
C H+ + L L+C+TC C +CT G + HS
Sbjct: 265 CQHHDDEVLHLYCDTCSVPICRECTLGRHGGHS 297
>ZFIN|ZDB-GENE-081031-1 [details] [associations]
symbol:trim35-33 "tripartite motif containing 35-33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-1 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU539057 EMBL:CU861903 IPI:IPI00486447 RefSeq:XP_001342275.1
Ensembl:ENSDART00000146662 GeneID:100002502 KEGG:dre:100002502
NextBio:20785475 Uniprot:F1R7D2
Length = 459
Score = 120 (47.3 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 43/171 (25%), Positives = 64/171 (37%)
Query: 46 TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
TP +L CSH+ C CL + R T CP+CR R P + + L +
Sbjct: 20 TPVILSCSHSFCQECLQQF----WRSKNTQECPVCRR-----RSSKGHPPVNLALKNLCE 70
Query: 106 LM---SRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPF 160
L +RR + CS H+ + LFC CL C H +HT P
Sbjct: 71 LFLAEGNERRSSGSEEICSLHSEKLKLFCLEDKQPACLVCCTSEKHL------KHTFRPI 124
Query: 161 SIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRRRGAHTQ 211
S + E L K K R ++ +A +++ + HT+
Sbjct: 125 SEVVPAKKEELNIALKSLQEKLK----RNEKVKGEFERAARHIKAQAEHTE 171
>UNIPROTKB|A0JNG4 [details] [associations]
symbol:RNF207 "RING finger protein 207" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BC123895 EMBL:BC126674 IPI:IPI00713240
IPI:IPI00868650 RefSeq:NP_001071525.1 UniGene:Bt.98029
ProteinModelPortal:A0JNG4 PRIDE:A0JNG4 GeneID:616057
KEGG:bta:616057 CTD:388591 eggNOG:NOG122723 HOGENOM:HOG000154160
HOVERGEN:HBG096720 InParanoid:A0JNG4 OrthoDB:EOG4QVCBS
NextBio:20899936 Uniprot:A0JNG4
Length = 556
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ P LL C H C CL AA G L CP+C+ Q + G
Sbjct: 23 LVCPLCHAQYE----RPCLLDCFHEFCAGCLRGRAAD-----GRLACPLCQHQTVVK--G 71
Query: 91 VAALPP-----SFLVNQLLDLMSRQR-RHIIPKCSTHNSQELLFCETCDTVFCLQC 140
+ LPP FLV+ D R + +C +++ FC TC C +C
Sbjct: 72 PSGLPPVDRLLQFLVDSSGDGTEVVRCANCDLECGKQDAETTYFCNTCGQPLCARC 127
>UNIPROTKB|G3X7K4 [details] [associations]
symbol:RNF207 "RING finger protein 207" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 UniGene:Bt.98029 GeneTree:ENSGT00510000048612
OMA:QSSKIAS EMBL:DAAA02043089 Ensembl:ENSBTAT00000034107
Uniprot:G3X7K4
Length = 556
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ P LL C H C CL AA G L CP+C+ Q + G
Sbjct: 23 LVCPLCHAQYE----RPCLLDCFHEFCAGCLRGRAAD-----GRLACPLCQHQTVVK--G 71
Query: 91 VAALPP-----SFLVNQLLDLMSRQR-RHIIPKCSTHNSQELLFCETCDTVFCLQC 140
+ LPP FLV+ D R + +C +++ FC TC C +C
Sbjct: 72 PSGLPPVDRLLQFLVDSSGDGTEVVRCANCDLECGKQDAETTYFCNTCGQPLCARC 127
>UNIPROTKB|Q5BIM1 [details] [associations]
symbol:TRIM45 "Tripartite motif-containing protein 45"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR001298 InterPro:IPR003649
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 SMART:SM00502 SMART:SM00557 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR017907 GeneTree:ENSGT00550000074377 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 EMBL:BT021203 IPI:IPI00691378
RefSeq:NP_001014952.1 UniGene:Bt.16668 ProteinModelPortal:Q5BIM1
SMR:Q5BIM1 STRING:Q5BIM1 PRIDE:Q5BIM1 Ensembl:ENSBTAT00000002293
GeneID:539091 KEGG:bta:539091 CTD:80263 eggNOG:NOG294122
HOGENOM:HOG000231266 HOVERGEN:HBG054905 InParanoid:Q5BIM1 KO:K12021
OMA:QLEPFSV OrthoDB:EOG4Q2DFH NextBio:20877776 Uniprot:Q5BIM1
Length = 580
Score = 89 (36.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 71 ETGTLRCPICREQITIPRGGVAALPPSFL-VNQLL--DLMSRQRRHIIPKCSTHNSQELL 127
+ G L CP+C Q+ +P GGV AL L +N ++ L + + CS ++
Sbjct: 89 QIGIL-CPVCDAQVDLPMGGVKALTIDHLAMNDVMLESLRGEGQGLVCDLCSDREVEKR- 146
Query: 128 FCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPFSIAIKRMSEI 170
C+TC C C H + HT++ +K S+I
Sbjct: 147 -CQTCKANLCRFCCQA--HRRQKKTTYHTMVDLK-DLKGYSQI 185
Score = 75 (31.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 37 LCMYDGGEHTPKLLPCSHTVCLHCLSRI 64
LCM G P+LLPC HTVC CL ++
Sbjct: 31 LCM--GLFKAPRLLPCLHTVCTTCLEQL 56
Score = 71 (30.1 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 118 CSTHNSQEL-LFCETCDTVFCLQCTGGSN 145
C H ++EL LFCE CD C C G +
Sbjct: 191 CPAHPAEELRLFCELCDRPVCRDCVVGEH 219
Score = 46 (21.3 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 144 SNHSSTSGDSEHTIIPFSIAIKRMSEI--LLYKANECVS-KNKVCPERKSNL 192
+ H TSG +I + ++R++++ + Y A+ V+ K P++K+ L
Sbjct: 331 TEHLLTSGSDLEILITKGVVVERLTKLNKVEYSAHPGVNEKISFSPKQKAGL 382
>UNIPROTKB|F1RIM2 [details] [associations]
symbol:RNF207 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 CTD:388591 GeneTree:ENSGT00510000048612
OMA:QSSKIAS EMBL:FP102454 RefSeq:XP_003481985.1
Ensembl:ENSSSCT00000003738 GeneID:100515143 KEGG:ssc:100515143
Uniprot:F1RIM2
Length = 634
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ P LL C H C CL AA G L CP+C+ Q + G
Sbjct: 23 LVCPLCHVQYE----RPCLLDCFHDFCAGCLRGRAAD-----GRLACPLCQHQTVVK--G 71
Query: 91 VAALPP-----SFLVNQLLDLMSRQR-RHIIPKCSTHNSQELLFCETCDTVFCLQC 140
+ LPP FLV+ D M + +C +++ FC TC C +C
Sbjct: 72 PSGLPPVDRLLQFLVDSSGDGMEVVHCANCDLECGKQDAETTYFCNTCGQPLCARC 127
>RGD|1562778 [details] [associations]
symbol:Trim72 "tripartite motif-containing 72" species:10116
"Rattus norvegicus" [GO:0001778 "plasma membrane repair"
evidence=ISO;ISS] [GO:0001786 "phosphatidylserine binding"
evidence=ISO;ISS] [GO:0003012 "muscle system process"
evidence=ISO;ISS] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030659
"cytoplasmic vesicle membrane" evidence=ISO;ISS] [GO:0042383
"sarcolemma" evidence=ISO;ISS] [GO:0051260 "protein
homooligomerization" evidence=ISO;ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1562778 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0051260 GO:GO:0042383 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0007517 GO:GO:0030659 GO:GO:0006887 GO:GO:0001786
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0001778
GO:GO:0003012 HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496
CTD:493829 eggNOG:NOG305247 HOVERGEN:HBG098570 KO:K12036
OMA:QDRVLVC OrthoDB:EOG498V10 EMBL:BC127539 IPI:IPI00361208
RefSeq:NP_001071143.1 UniGene:Rn.23565 ProteinModelPortal:A0JPQ4
PRIDE:A0JPQ4 Ensembl:ENSRNOT00000029994 GeneID:365377
KEGG:rno:365377 UCSC:RGD:1562778 InParanoid:A0JPQ4 NextBio:687303
Genevestigator:A0JPQ4 Uniprot:A0JPQ4
Length = 477
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C CL ++D P C H+ C CL R+A + + GT+ CP C+ T P+
Sbjct: 12 LSCPLCLQLFDA----PVTAECGHSFCRACLIRVAG-EPADDGTVACPCCQAS-TRPQ-- 63
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPK--CSTHNSQELLFCETCDTVFCLQCTGGSNHSS 148
AL + + +L++ +++ +P+ C H ++CE T+ C C +H
Sbjct: 64 --ALSTNLQLARLVEGLAQ-----VPQGHCEEHLDPLSIYCEQDRTLVCGVCASLGSHRG 116
Query: 149 TSGDSEHTIIPFSIAIKRM-SEILLYKAN---ECVSKNK 183
H ++P + A R+ +++ KA C+ K K
Sbjct: 117 ------HRLLPAAEAHARLKTQLPQQKAQLQEACMRKEK 149
>MGI|MGI:1933161 [details] [associations]
symbol:Trim23 "tripartite motif-containing 23" species:10090
"Mus musculus" [GO:0000139 "Golgi membrane" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005765 "lysosomal membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006471
"protein ADP-ribosylation" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003649 InterPro:IPR005225
InterPro:IPR006689 InterPro:IPR007087 InterPro:IPR024156
Pfam:PF00025 Pfam:PF00643 PRINTS:PR00328 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS51417 SMART:SM00177 SMART:SM00184
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 MGI:MGI:1933161
Prosite:PS00518 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0007264 GO:GO:0000139 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 GO:GO:0003924 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:COG1100 GO:GO:0006471
GeneTree:ENSGT00670000097997 InterPro:IPR017907 GO:GO:0019003
KO:K07963 OMA:RAVRCPF CTD:373 HOGENOM:HOG000008208
HOVERGEN:HBG000551 OrthoDB:EOG4001HX EMBL:AK030843 EMBL:AK030862
EMBL:AK039280 EMBL:AK042070 EMBL:AK088922 EMBL:BC056390
EMBL:BC059017 IPI:IPI00228766 IPI:IPI00318062 IPI:IPI00404623
RefSeq:NP_109656.1 UniGene:Mm.244190 ProteinModelPortal:Q8BGX0
SMR:Q8BGX0 STRING:Q8BGX0 PhosphoSite:Q8BGX0 PaxDb:Q8BGX0
PRIDE:Q8BGX0 Ensembl:ENSMUST00000022225 Ensembl:ENSMUST00000069174
Ensembl:ENSMUST00000069187 GeneID:81003 KEGG:mmu:81003
UCSC:uc007rsx.1 UCSC:uc007rsy.1 UCSC:uc011zeg.1 InParanoid:Q8BGX0
NextBio:350338 Bgee:Q8BGX0 CleanEx:MM_TRIM23 Genevestigator:Q8BGX0
GermOnline:ENSMUSG00000021712 Uniprot:Q8BGX0
Length = 574
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 39/149 (26%), Positives = 65/149 (43%)
Query: 31 LTCGTCLCMYD-GGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRG 89
L CG C ++ G+ P+LL C HTVC CL+R+ +RCP R+ +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGR----AIRCPFDRQVTDLGDS 84
Query: 90 GVAALPPSFLVNQLLDLMSRQRRHI----------------IPKCSTHNSQEL-LFCETC 132
GV L +F + +LL+ + Q HI I +C + ++C C
Sbjct: 85 GVWGLKKNFALLELLERL--QNGHIGQYGAAEEAIGTSGESIIRCDEDEAHVASVYCTVC 142
Query: 133 DTVFCLQCTGGSNHSSTSGDSEHTIIPFS 161
T C C+ ++ + T ++H +P +
Sbjct: 143 ATHLCSDCSQVTHSTKTL--AKHRRVPLA 169
>UNIPROTKB|E2RFB0 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:AAEX03004245 RefSeq:XP_546929.2 ProteinModelPortal:E2RFB0
Ensembl:ENSCAFT00000020820 GeneID:489811 KEGG:cfa:489811
NextBio:20862932 Uniprot:E2RFB0
Length = 487
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 39/165 (23%), Positives = 67/165 (40%)
Query: 28 ESFLTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIP 87
E L C CL ++ P +L C H+ C CL ++ E LRCP+C++++
Sbjct: 11 EDRLQCPICLEVFK----EPMMLQCGHSYCKGCLVSLSRHLDSE---LRCPVCQQEVDS- 62
Query: 88 RGGVAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHS 147
++ PP+ + ++++ + C H + LFCE + C C +H
Sbjct: 63 ----SSSPPNVSLARVIEALQFPGDPEPKVCEHHRNPLSLFCERDQELICGLCGLLGSHQ 118
Query: 148 STSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNL 192
H + P S RM E L ++ + K E + L
Sbjct: 119 ------HHRVTPASTVYSRMKEELAALISDLKREQKKVDEHIAKL 157
>ZFIN|ZDB-GENE-081030-14 [details] [associations]
symbol:trim35-37 "tripartite motif containing 35-37"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081030-14
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 EMBL:CU137686 IPI:IPI00512555
Ensembl:ENSDART00000140241 Uniprot:E9QHI9
Length = 409
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 43/171 (25%), Positives = 63/171 (36%)
Query: 46 TPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGGVAALPPSFLVNQLLD 105
TP LL CSH+ C CL + R T CP+CR R +A P + + + +
Sbjct: 20 TPVLLSCSHSFCKECLQQF----WRNKNTQECPVCRR-----RSSKSAPPVNLGLKNVCE 70
Query: 106 LMSRQRRHIIPK-----CSTHNSQELLFCETCDTVFCLQCTGGSNHSSTSGDSEHTIIPF 160
++R CS H+ + LFC CL C H +HT P
Sbjct: 71 SFLKERNESRSSGSEEICSLHSEKLKLFCLEDKQPVCLVCRDSEKHL------KHTFRPV 124
Query: 161 SIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRRRGAHTQ 211
S E L K K+ E K +A +++ + HT+
Sbjct: 125 SEVAPAKKEELNTALKSLQEKCKLNEEMKREFEKTAQ----HIKAQAEHTE 171
>UNIPROTKB|Q5BN31 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:39432 "Saimiri boliviensis boliviensis" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0002218
"activation of innate immune response" evidence=ISS] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0008329 "pattern recognition receptor activity" evidence=ISS]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740614 EMBL:AY928202
ProteinModelPortal:Q5BN31 SMR:Q5BN31 PRIDE:Q5BN31 Uniprot:Q5BN31
Length = 494
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 33/120 (27%), Positives = 48/120 (40%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C C++ G CP+CR +P
Sbjct: 13 VTCPICLELLT----EPLSLDCGHSFCQACITANHKESMLHQGERSCPLCR----LPYQS 64
Query: 91 VAALPPSFL---VNQLLDLMSR-QRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNH 146
P L V +L ++M R + R + C+ H + LLFCE + C C H
Sbjct: 65 ENLRPNRHLASIVERLREVMLRPEERQNVDHCARHGEKLLLFCEQDGNIICWLCERSQEH 124
>UNIPROTKB|Q5D7I0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9521 "Saimiri sciureus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843517
ProteinModelPortal:Q5D7I0 SMR:Q5D7I0 Uniprot:Q5D7I0
Length = 494
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 33/120 (27%), Positives = 48/120 (40%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C C++ G CP+CR +P
Sbjct: 13 VTCPICLELLT----EPLSLDCGHSFCQACITANHKESMLHQGERSCPLCR----LPYQS 64
Query: 91 VAALPPSFL---VNQLLDLMSR-QRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNH 146
P L V +L ++M R + R + C+ H + LLFCE + C C H
Sbjct: 65 ENLRPNRHLASIVERLREVMLRPEERQNVDHCARHGEKLLLFCEQDGNIICWLCERSQEH 124
>UNIPROTKB|Q5D7I5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9493 "Callithrix pygmaea" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843512
ProteinModelPortal:Q5D7I5 SMR:Q5D7I5 Uniprot:Q5D7I5
Length = 494
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 37/144 (25%), Positives = 58/144 (40%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C C++ T G CP+CR ++ P
Sbjct: 13 VTCPICLELLT----EPLSLDCGHSFCQACITANHKESTLHQGERSCPLCR--MSYPSEN 66
Query: 91 VAALPPSFLVN---QLLDLM-SRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNH 146
+ P L N +L ++M S + + C+ H + LLFC+ V C C H
Sbjct: 67 LR--PNRHLANIVERLKEVMLSPEEGQKVDHCARHGEKLLLFCQQDGNVICWLCERSQEH 124
Query: 147 SSTSGDSEHTIIPFSIAIKRMSEI 170
HT + +A K ++
Sbjct: 125 RG-----HHTFLVEEVAEKYQGKL 143
>UNIPROTKB|Q6ZRF8 [details] [associations]
symbol:RNF207 "RING finger protein 207" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL031847 CTD:388591
eggNOG:NOG122723 HOGENOM:HOG000154160 HOVERGEN:HBG096720
OrthoDB:EOG4QVCBS EMBL:AK056658 EMBL:AK127700 EMBL:AK128246
EMBL:AK294223 EMBL:BC119780 EMBL:BC128237 IPI:IPI00043236
IPI:IPI00397747 IPI:IPI00830073 IPI:IPI00867610 RefSeq:NP_997279.2
UniGene:Hs.716549 ProteinModelPortal:Q6ZRF8 SMR:Q6ZRF8
STRING:Q6ZRF8 PhosphoSite:Q6ZRF8 DMDM:158563957 PRIDE:Q6ZRF8
Ensembl:ENST00000377939 Ensembl:ENST00000377948 GeneID:388591
KEGG:hsa:388591 UCSC:uc001amf.1 UCSC:uc001amg.3
GeneCards:GC01P006265 H-InvDB:HIX0000075 HGNC:HGNC:32947
HPA:HPA028378 neXtProt:NX_Q6ZRF8 PharmGKB:PA145148144
InParanoid:Q6ZRF8 OMA:QSSKIAS GenomeRNAi:388591 NextBio:102203
Bgee:Q6ZRF8 CleanEx:HS_RNF207 Genevestigator:Q6ZRF8 Uniprot:Q6ZRF8
Length = 634
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L C C Y+ P LL C H C CL A G L CP+C+ Q + G
Sbjct: 23 LVCPLCHVQYE----RPCLLDCFHDFCAGCLRGRATD-----GRLTCPLCQHQTVLK--G 71
Query: 91 VAALPP-----SFLVNQLLDLMSRQR-RHIIPKCSTHNSQELLFCETCDTVFCLQC 140
+ LPP FLV+ D + R + +CS + + FC TC C +C
Sbjct: 72 PSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARC 127
>UNIPROTKB|F8W6N8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI01012489 ProteinModelPortal:F8W6N8 SMR:F8W6N8
Ensembl:ENST00000396853 ArrayExpress:F8W6N8 Bgee:F8W6N8
Uniprot:F8W6N8
Length = 327
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 39/164 (23%), Positives = 64/164 (39%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
+TC CL + P L C H+ C CL+ + G CP+CR P
Sbjct: 13 VTCPICLELLT----QPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ-PENI 67
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPKCSTHNSQELLFCETCDTVFCLQCTGGSNHSSTS 150
+ +V +L ++ + C+ H + LLFC+ V C C H
Sbjct: 68 RPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRG-- 125
Query: 151 GDSEHTIIPFSIAIKRMSEILLYKANECV-SKNKVCPERKSNLR 193
HT + +A R ++ L A E + K + E ++++R
Sbjct: 126 ---HHTFLTEEVA--REYQVKLQAALEMLRQKQQEAEELEADIR 164
>ZFIN|ZDB-GENE-060503-484 [details] [associations]
symbol:trim35-25 "tripartite motif containing
35-25" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-484 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:AL954363
IPI:IPI00785705 Ensembl:ENSDART00000133133 Uniprot:Q1MT08
Length = 448
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 43/186 (23%), Positives = 70/186 (37%)
Query: 31 LTCGTCLCMYDGGEHTPKLLPCSHTVCLHCLSRIAASQTRETGTLRCPICREQITIPRGG 90
L+C C ++ P +L CSH+VC CL + ++T T CP+CR R
Sbjct: 10 LSCPVCCEIFKN----PVVLSCSHSVCKECLQQYWRTKT----TQECPVCRR-----RSS 56
Query: 91 VAALPPSFLVNQLLDLMSRQRRHIIPK-----CSTHNSQELLFCETCDTVFCLQCTGGSN 145
P + + L +L ++R CS H+ + LFC C+ C
Sbjct: 57 KGEPPVNLALKNLCELFLKERNERCSSASEEICSLHSEKLKLFCLEDKQPVCVMCVTLQQ 116
Query: 146 HSSTSGDSEHTIIPFSIAIKRMSEILLYKANECVSKNKVCPERKSNLRPSAHKADAYVRR 205
H + H P S E L N + +V +R + K +++
Sbjct: 117 HDN------HKFRPISEVASSYKEEL----NTALKSLQVKLKRNEERKAEFEKTVQHIKS 166
Query: 206 RGAHTQ 211
+ HT+
Sbjct: 167 QADHTE 172
WARNING: HSPs involving 85 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 236 0.00089 113 3 11 22 0.37 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 335
No. of states in DFA: 590 (63 KB)
Total size of DFA: 187 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.63u 0.08s 22.71t Elapsed: 00:00:04
Total cpu time: 22.67u 0.08s 22.75t Elapsed: 00:00:04
Start: Thu Aug 15 12:08:00 2013 End: Thu Aug 15 12:08:04 2013
WARNINGS ISSUED: 2