BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11860
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C8H8|KY_MOUSE Kyphoscoliosis peptidase OS=Mus musculus GN=Ky PE=1 SV=1
Length = 661
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 22 LLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLK 81
L+ WG+ +D+ + + Y++ YFLT P FI + FP WQLLK
Sbjct: 280 LVDSTWGSGLVDTT-----------TSKFTFLYNEFYFLTHPALFIEDHFPDNKNWQLLK 328
Query: 82 TSISLRDFEELPFVRSLFFRYGLYFPDTNTKAV 114
SLR FE + +S F+ G+ T +
Sbjct: 329 PPQSLRQFENSMYHKSEFYNKGMLSAHPETSMI 361
>sp|Q8NBH2|KY_HUMAN Kyphoscoliosis peptidase OS=Homo sapiens GN=KY PE=1 SV=2
Length = 561
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 54 YDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKA 113
Y++ YFLT P FI + FP WQLLK SLR FE + +S F+ G+ T
Sbjct: 301 YNEFYFLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENNMYHKSEFYNKGMLSAHPETSM 360
Query: 114 V 114
+
Sbjct: 361 I 361
>sp|O14302|CYK3_SCHPO cytokinesis protein 3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cyk3 PE=1 SV=1
Length = 886
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 55 DDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAV 114
+D YFL P E I+ P P+ Q + +S+ LP+V S++F GL NT +
Sbjct: 611 NDFYFLMKPNECIFTHVPENPDQQFIMPDLSMPIVMALPWVSSVYFTLGLKLRKFNTSIL 670
Query: 115 MYTD 118
D
Sbjct: 671 HLND 674
>sp|Q9CA63|FBK29_ARATH F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana
GN=At1g74510 PE=2 SV=1
Length = 451
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Query: 1 MTERDI-GTYYEDSKWVQTLNFLLQCNWGARHLD-------SAKQVLKV--GAKGKSDSL 50
+ RD+ + E+SKW+ + +LQ + R LD SAK++L+V G++G+SD +
Sbjct: 8 LVSRDLPSSCEEESKWIYNAHCVLQLSLRKRLLDDTDVEGSSAKKMLRVDHGSRGESDKI 67
>sp|C0LGD9|Y1756_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1
Length = 871
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 34 SAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISL 86
S K + +V +++RY D H L P FF PEW+LL+TS+++
Sbjct: 191 SLKTLFRVHLTDSKETVRYPEDVHDRLWSP------FF--MPEWRLLRTSLTV 235
>sp|Q25390|SCRA_LIMPO Alpha-scruin OS=Limulus polyphemus PE=2 SV=1
Length = 918
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 67 IYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQT 120
++++ PL+ W+ R++ + RS + G Y PD T M +T
Sbjct: 611 VFQYHPLKDRWEFFGYMPQPRNYHAAAYYRSAIYITGGYDPDVRTWGEMVATKT 664
>sp|Q84VG6|PP160_ARATH Pentatricopeptide repeat-containing protein At2g17525,
mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2
SV=2
Length = 626
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 9 YYEDSKWVQTLNFLLQC-NWGARHLDSAKQVLKVGAKGKSDSLRYEYD 55
+Y++++W L FLL+ R +D + +++ + KG D L+ YD
Sbjct: 435 FYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
>sp|P09107|AMY_TRICA Alpha-amylase (Fragment) OS=Tribolium castaneum PE=3 SV=2
Length = 489
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 7 GTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREF 66
G+ Y SK ++ +N L+ +D+AK + + SL+ DH FL + F
Sbjct: 177 GSDYVRSKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIYASLKNLNTDHGFLDGQKPF 236
Query: 67 IYE 69
I++
Sbjct: 237 IFQ 239
>sp|Q876F4|SC241_SACBA Protein transport protein SEC24-1 OS=Saccharomyces bayanus
GN=SEC241 PE=3 SV=1
Length = 885
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 57 HYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMY 116
HY + +Y + E LL ++ + + + SLF RYGLY D +T+ ++
Sbjct: 711 HYLIKSIYPTVYSLHDIPDEVGLLDSNRETKLPDPINATASLFERYGLYLIDNSTELFLW 770
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,919,943
Number of Sequences: 539616
Number of extensions: 1825173
Number of successful extensions: 3123
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3117
Number of HSP's gapped (non-prelim): 9
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)