Query psy11862
Match_columns 152
No_of_seqs 111 out of 1208
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 20:51:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02996 fatty acyl-CoA reduct 99.9 5.1E-23 1.1E-27 159.2 16.3 151 2-152 3-160 (491)
2 PLN02503 fatty acyl-CoA reduct 99.9 8.9E-23 1.9E-27 160.0 16.2 149 4-152 113-267 (605)
3 KOG1221|consensus 99.9 9E-23 1.9E-27 154.1 13.6 150 3-152 5-154 (467)
4 PF07993 NAD_binding_4: Male s 99.9 6.7E-23 1.4E-27 146.4 7.3 133 15-152 1-134 (249)
5 KOG1502|consensus 99.9 9.4E-21 2E-25 137.5 13.1 122 9-152 5-128 (327)
6 COG3320 Putative dehydrogenase 99.8 1.4E-20 3.1E-25 137.8 11.3 134 11-152 1-134 (382)
7 PF01073 3Beta_HSD: 3-beta hyd 99.8 2.5E-19 5.4E-24 130.0 10.5 113 14-152 1-115 (280)
8 COG1086 Predicted nucleoside-d 99.8 5.9E-19 1.3E-23 134.9 10.4 126 4-152 244-375 (588)
9 PRK15181 Vi polysaccharide bio 99.8 8.1E-18 1.8E-22 125.5 13.3 126 7-152 12-140 (348)
10 PLN00198 anthocyanidin reducta 99.8 1.1E-17 2.3E-22 124.3 13.6 127 2-152 2-130 (338)
11 PLN02662 cinnamyl-alcohol dehy 99.8 1.8E-17 3.9E-22 122.1 13.8 122 9-152 3-126 (322)
12 PLN02986 cinnamyl-alcohol dehy 99.8 2.6E-17 5.6E-22 121.5 13.6 122 9-152 4-127 (322)
13 PLN02214 cinnamoyl-CoA reducta 99.8 2.9E-17 6.2E-22 122.4 13.8 126 1-152 1-126 (342)
14 PF02719 Polysacc_synt_2: Poly 99.8 1.5E-18 3.2E-23 124.9 6.0 120 13-152 1-127 (293)
15 TIGR01746 Thioester-redct thio 99.7 3.5E-17 7.6E-22 122.0 12.8 135 12-152 1-135 (367)
16 PLN02650 dihydroflavonol-4-red 99.7 6.9E-17 1.5E-21 120.6 13.0 122 9-152 4-127 (351)
17 COG1087 GalE UDP-glucose 4-epi 99.7 2.7E-17 5.8E-22 117.5 9.9 112 11-152 1-117 (329)
18 PLN02989 cinnamyl-alcohol dehy 99.7 1.3E-16 2.8E-21 117.9 13.9 121 10-152 5-128 (325)
19 TIGR03589 PseB UDP-N-acetylglu 99.7 1.1E-16 2.4E-21 118.4 13.0 120 8-152 2-124 (324)
20 PLN02572 UDP-sulfoquinovose sy 99.7 1.9E-16 4.1E-21 121.6 13.2 127 4-152 41-190 (442)
21 CHL00194 ycf39 Ycf39; Provisio 99.7 8E-17 1.7E-21 118.8 10.3 109 11-152 1-109 (317)
22 PLN02583 cinnamoyl-CoA reducta 99.7 3.5E-16 7.5E-21 114.5 13.3 122 9-152 5-127 (297)
23 PRK07201 short chain dehydroge 99.7 2.7E-16 5.8E-21 125.9 12.4 122 11-152 1-124 (657)
24 TIGR02622 CDP_4_6_dhtase CDP-g 99.7 6.3E-16 1.4E-20 115.4 13.1 120 8-152 2-126 (349)
25 COG0300 DltE Short-chain dehyd 99.7 8.3E-16 1.8E-20 109.5 12.5 123 7-152 3-142 (265)
26 COG1088 RfbB dTDP-D-glucose 4, 99.7 6.5E-16 1.4E-20 110.2 11.5 120 11-152 1-125 (340)
27 PLN02896 cinnamyl-alcohol dehy 99.7 7.7E-16 1.7E-20 115.1 12.6 119 9-152 9-137 (353)
28 PLN02427 UDP-apiose/xylose syn 99.7 8E-16 1.7E-20 116.2 12.8 119 9-152 13-135 (386)
29 PRK11908 NAD-dependent epimera 99.7 1E-15 2.2E-20 114.1 12.6 113 10-152 1-117 (347)
30 TIGR01472 gmd GDP-mannose 4,6- 99.7 1.1E-15 2.5E-20 113.7 12.1 123 11-152 1-131 (343)
31 PRK10217 dTDP-glucose 4,6-dehy 99.7 1.3E-15 2.8E-20 113.8 12.3 120 10-152 1-133 (355)
32 PLN03209 translocon at the inn 99.7 1.8E-15 3.9E-20 117.7 13.3 131 6-152 76-207 (576)
33 KOG1371|consensus 99.7 5E-16 1.1E-20 111.9 9.4 121 10-152 2-127 (343)
34 COG4221 Short-chain alcohol de 99.7 2.2E-15 4.8E-20 105.1 12.1 125 8-152 4-139 (246)
35 PLN02260 probable rhamnose bio 99.7 2E-15 4.4E-20 121.2 13.7 123 8-152 4-131 (668)
36 PLN02686 cinnamoyl-CoA reducta 99.7 9.4E-16 2E-20 115.2 10.8 127 7-152 50-179 (367)
37 KOG1205|consensus 99.7 8.7E-16 1.9E-20 110.2 9.4 130 6-152 8-149 (282)
38 PRK07523 gluconate 5-dehydroge 99.7 3.1E-15 6.7E-20 106.9 12.3 122 7-152 7-145 (255)
39 PLN02695 GDP-D-mannose-3',5'-e 99.6 2.2E-15 4.8E-20 113.4 11.7 113 9-152 20-136 (370)
40 PLN02653 GDP-mannose 4,6-dehyd 99.6 2.5E-15 5.4E-20 111.7 11.9 125 8-152 4-138 (340)
41 PLN02240 UDP-glucose 4-epimera 99.6 4.1E-15 8.8E-20 110.9 13.0 123 8-152 3-131 (352)
42 PRK13394 3-hydroxybutyrate deh 99.6 3.7E-15 7.9E-20 106.7 12.3 122 7-152 4-143 (262)
43 PRK06194 hypothetical protein; 99.6 4.9E-15 1.1E-19 107.6 12.8 121 8-152 4-147 (287)
44 PRK07063 short chain dehydroge 99.6 5.7E-15 1.2E-19 105.9 12.6 125 6-152 3-144 (260)
45 PLN02206 UDP-glucuronate decar 99.6 4.1E-15 8.9E-20 114.1 12.6 112 9-152 118-232 (442)
46 PRK06398 aldose dehydrogenase; 99.6 5.6E-15 1.2E-19 106.0 12.3 110 8-152 4-130 (258)
47 PRK08125 bifunctional UDP-gluc 99.6 2.6E-15 5.7E-20 120.4 11.5 116 7-152 312-431 (660)
48 PRK08339 short chain dehydroge 99.6 8.3E-15 1.8E-19 105.5 12.6 122 8-152 6-143 (263)
49 PRK06180 short chain dehydroge 99.6 7.2E-15 1.6E-19 106.4 11.9 117 9-152 3-136 (277)
50 PLN02657 3,8-divinyl protochlo 99.6 3.9E-15 8.4E-20 112.7 10.6 120 8-152 58-181 (390)
51 PRK06197 short chain dehydroge 99.6 7.5E-15 1.6E-19 107.8 11.7 123 8-152 14-151 (306)
52 PRK12823 benD 1,6-dihydroxycyc 99.6 8.9E-15 1.9E-19 104.8 11.7 123 5-152 3-143 (260)
53 PLN02166 dTDP-glucose 4,6-dehy 99.6 1.3E-14 2.7E-19 111.3 13.2 112 9-152 119-233 (436)
54 PRK06128 oxidoreductase; Provi 99.6 1.4E-14 3.1E-19 106.0 12.9 123 8-152 53-191 (300)
55 PRK05876 short chain dehydroge 99.6 1.1E-14 2.4E-19 105.4 12.1 121 8-152 4-142 (275)
56 PRK08085 gluconate 5-dehydroge 99.6 1.5E-14 3.3E-19 103.3 12.5 121 8-152 7-144 (254)
57 PRK10675 UDP-galactose-4-epime 99.6 1.5E-14 3.2E-19 107.3 12.8 118 11-152 1-123 (338)
58 PRK12826 3-ketoacyl-(acyl-carr 99.6 1.5E-14 3.3E-19 102.8 12.3 121 8-152 4-141 (251)
59 PRK07814 short chain dehydroge 99.6 1.6E-14 3.5E-19 103.8 12.5 121 8-152 8-146 (263)
60 PRK07666 fabG 3-ketoacyl-(acyl 99.6 1.7E-14 3.6E-19 102.2 12.4 122 7-152 4-142 (239)
61 TIGR03466 HpnA hopanoid-associ 99.6 7.3E-15 1.6E-19 108.3 10.9 111 11-152 1-112 (328)
62 PF00106 adh_short: short chai 99.6 7.1E-15 1.5E-19 98.6 9.7 120 11-152 1-134 (167)
63 PRK07478 short chain dehydroge 99.6 1.8E-14 4E-19 102.9 12.4 121 8-152 4-142 (254)
64 PRK07775 short chain dehydroge 99.6 2.1E-14 4.6E-19 103.9 12.8 128 1-152 1-145 (274)
65 PRK06182 short chain dehydroge 99.6 2.1E-14 4.5E-19 103.7 12.7 115 8-152 1-132 (273)
66 PRK12746 short chain dehydroge 99.6 1.4E-14 3.1E-19 103.4 11.7 121 8-152 4-146 (254)
67 PRK10084 dTDP-glucose 4,6 dehy 99.6 1.1E-14 2.5E-19 108.6 11.7 119 11-152 1-132 (352)
68 PRK07576 short chain dehydroge 99.6 1.6E-14 3.6E-19 103.9 12.0 127 1-152 1-143 (264)
69 PRK12429 3-hydroxybutyrate deh 99.6 2.1E-14 4.4E-19 102.6 12.2 121 8-152 2-139 (258)
70 PRK12481 2-deoxy-D-gluconate 3 99.6 1.4E-14 3E-19 103.6 11.2 119 8-152 6-142 (251)
71 PRK09987 dTDP-4-dehydrorhamnos 99.6 6.4E-15 1.4E-19 107.9 9.6 98 11-152 1-103 (299)
72 PLN02253 xanthoxin dehydrogena 99.6 2.2E-14 4.8E-19 103.9 12.3 121 7-152 15-154 (280)
73 PRK08213 gluconate 5-dehydroge 99.6 2.4E-14 5.2E-19 102.6 12.2 121 8-152 10-148 (259)
74 PRK06139 short chain dehydroge 99.6 2.4E-14 5.3E-19 106.2 12.5 121 8-152 5-142 (330)
75 PRK06482 short chain dehydroge 99.6 1.5E-14 3.2E-19 104.6 11.1 116 10-152 2-134 (276)
76 TIGR03443 alpha_am_amid L-amin 99.6 2.2E-14 4.9E-19 122.8 13.9 136 10-152 971-1108(1389)
77 KOG1430|consensus 99.6 1E-14 2.2E-19 108.0 10.2 121 8-152 2-125 (361)
78 PRK06179 short chain dehydroge 99.6 1.8E-14 4E-19 103.8 11.4 112 9-152 3-131 (270)
79 PRK07774 short chain dehydroge 99.6 3E-14 6.5E-19 101.4 12.3 121 8-152 4-144 (250)
80 PRK05866 short chain dehydroge 99.6 2.9E-14 6.3E-19 104.2 12.5 121 8-152 38-177 (293)
81 PRK06114 short chain dehydroge 99.6 3.4E-14 7.4E-19 101.6 12.6 122 8-152 6-144 (254)
82 COG0451 WcaG Nucleoside-diphos 99.6 1.5E-14 3.3E-19 105.9 11.0 109 12-152 2-115 (314)
83 PRK06935 2-deoxy-D-gluconate 3 99.6 2.3E-14 4.9E-19 102.7 11.6 120 8-152 13-149 (258)
84 PRK05717 oxidoreductase; Valid 99.6 2.8E-14 6.1E-19 102.0 12.0 125 7-152 7-143 (255)
85 PRK08063 enoyl-(acyl carrier p 99.6 2.9E-14 6.3E-19 101.5 12.0 121 8-152 2-140 (250)
86 PRK08277 D-mannonate oxidoredu 99.6 3.6E-14 7.8E-19 102.7 12.6 121 8-152 8-160 (278)
87 PRK06196 oxidoreductase; Provi 99.6 2.2E-14 4.9E-19 105.7 11.7 117 8-152 24-155 (315)
88 PRK07453 protochlorophyllide o 99.6 2.4E-14 5.3E-19 105.8 11.9 121 8-152 4-144 (322)
89 PRK07109 short chain dehydroge 99.6 3.2E-14 6.8E-19 105.8 12.4 123 6-152 4-143 (334)
90 TIGR01832 kduD 2-deoxy-D-gluco 99.6 2.9E-14 6.3E-19 101.4 11.8 119 8-152 3-139 (248)
91 PRK06124 gluconate 5-dehydroge 99.6 3.7E-14 7.9E-19 101.4 12.2 128 1-152 1-146 (256)
92 PRK12939 short chain dehydroge 99.6 3.1E-14 6.8E-19 101.2 11.8 121 8-152 5-142 (250)
93 PRK05854 short chain dehydroge 99.6 2.3E-14 5E-19 105.6 11.4 123 8-152 12-149 (313)
94 PRK05653 fabG 3-ketoacyl-(acyl 99.6 4.9E-14 1.1E-18 99.7 12.6 121 8-152 3-140 (246)
95 PRK08628 short chain dehydroge 99.6 3.7E-14 8E-19 101.5 12.1 120 8-152 5-139 (258)
96 PRK06523 short chain dehydroge 99.6 2.1E-14 4.5E-19 102.9 10.8 124 1-152 1-137 (260)
97 PRK08263 short chain dehydroge 99.6 2.4E-14 5.1E-19 103.6 11.1 118 8-152 1-135 (275)
98 PRK05867 short chain dehydroge 99.6 3.8E-14 8.2E-19 101.3 12.0 121 8-152 7-145 (253)
99 TIGR03206 benzo_BadH 2-hydroxy 99.6 4.5E-14 9.8E-19 100.4 12.2 121 8-152 1-138 (250)
100 TIGR01181 dTDP_gluc_dehyt dTDP 99.6 3.9E-14 8.4E-19 103.8 12.2 119 12-152 1-124 (317)
101 PF01370 Epimerase: NAD depend 99.6 1.4E-14 3.1E-19 102.0 9.5 110 13-152 1-115 (236)
102 PRK06138 short chain dehydroge 99.6 5.3E-14 1.2E-18 100.2 12.5 120 8-152 3-139 (252)
103 PRK07231 fabG 3-ketoacyl-(acyl 99.6 4.7E-14 1E-18 100.3 12.2 120 8-152 3-140 (251)
104 PRK08589 short chain dehydroge 99.6 5.2E-14 1.1E-18 101.7 12.5 120 8-152 4-140 (272)
105 PRK06171 sorbitol-6-phosphate 99.6 5E-14 1.1E-18 101.3 12.3 118 1-152 1-144 (266)
106 PRK07890 short chain dehydroge 99.6 5E-14 1.1E-18 100.7 12.1 121 8-152 3-140 (258)
107 PRK07825 short chain dehydroge 99.6 4.5E-14 9.8E-19 101.9 11.9 123 8-152 3-136 (273)
108 PRK07985 oxidoreductase; Provi 99.6 7.5E-14 1.6E-18 102.1 13.1 129 8-152 47-185 (294)
109 PRK08265 short chain dehydroge 99.6 7.7E-14 1.7E-18 100.2 12.7 118 8-152 4-136 (261)
110 PRK08226 short chain dehydroge 99.6 4.8E-14 1E-18 101.2 11.6 120 8-152 4-140 (263)
111 PRK06841 short chain dehydroge 99.6 3.7E-14 8.1E-19 101.3 10.9 118 8-152 13-147 (255)
112 PRK06463 fabG 3-ketoacyl-(acyl 99.6 7.9E-14 1.7E-18 99.7 12.5 116 8-152 5-137 (255)
113 PRK09186 flagellin modificatio 99.6 7.3E-14 1.6E-18 99.7 12.3 123 8-152 2-144 (256)
114 PF08659 KR: KR domain; Inter 99.6 6.3E-14 1.4E-18 95.7 11.4 119 12-152 2-135 (181)
115 PRK06914 short chain dehydroge 99.6 3.5E-14 7.6E-19 102.8 10.6 123 8-152 1-139 (280)
116 PRK08278 short chain dehydroge 99.6 1.4E-13 3E-18 99.6 13.6 127 8-152 4-148 (273)
117 PRK08267 short chain dehydroge 99.6 6.9E-14 1.5E-18 100.2 11.9 117 10-152 1-135 (260)
118 PRK12827 short chain dehydroge 99.6 1.1E-13 2.5E-18 98.2 12.9 125 8-152 4-146 (249)
119 PRK07097 gluconate 5-dehydroge 99.6 9.7E-14 2.1E-18 99.8 12.6 121 8-152 8-145 (265)
120 PRK05872 short chain dehydroge 99.6 7.3E-14 1.6E-18 102.2 12.1 120 8-152 7-142 (296)
121 PRK12936 3-ketoacyl-(acyl-carr 99.6 8.9E-14 1.9E-18 98.6 12.2 118 8-152 4-138 (245)
122 KOG1201|consensus 99.6 7E-14 1.5E-18 100.1 11.5 127 6-151 34-171 (300)
123 PRK12935 acetoacetyl-CoA reduc 99.6 9E-14 1.9E-18 98.8 12.1 122 8-152 4-142 (247)
124 PRK07856 short chain dehydroge 99.6 7.4E-14 1.6E-18 99.7 11.7 113 8-152 4-134 (252)
125 PRK08643 acetoin reductase; Va 99.6 1.5E-13 3.2E-18 98.3 12.8 119 10-152 2-138 (256)
126 PRK12825 fabG 3-ketoacyl-(acyl 99.6 1.2E-13 2.6E-18 97.8 12.3 122 8-152 4-142 (249)
127 PRK12828 short chain dehydroge 99.6 1.3E-13 2.9E-18 97.2 12.4 119 8-152 5-140 (239)
128 PRK12938 acetyacetyl-CoA reduc 99.6 1.2E-13 2.6E-18 98.1 12.2 122 8-152 1-139 (246)
129 PRK07806 short chain dehydroge 99.6 4.5E-14 9.8E-19 100.4 9.9 121 8-152 4-134 (248)
130 PRK07326 short chain dehydroge 99.6 1.1E-13 2.3E-18 97.8 11.8 120 8-152 4-139 (237)
131 TIGR01963 PHB_DH 3-hydroxybuty 99.6 1.8E-13 3.9E-18 97.5 13.1 125 10-152 1-136 (255)
132 PRK10538 malonic semialdehyde 99.6 1.1E-13 2.4E-18 98.6 11.9 115 11-152 1-133 (248)
133 PRK06172 short chain dehydroge 99.5 1.3E-13 2.7E-18 98.5 12.1 121 8-152 5-143 (253)
134 PRK05993 short chain dehydroge 99.5 1.3E-13 2.8E-18 99.9 12.3 112 10-152 4-134 (277)
135 PRK09291 short chain dehydroge 99.5 1.2E-13 2.7E-18 98.6 12.1 119 10-152 2-131 (257)
136 PRK07102 short chain dehydroge 99.5 1.3E-13 2.8E-18 97.9 11.9 120 10-152 1-134 (243)
137 PRK12367 short chain dehydroge 99.5 7.1E-14 1.5E-18 99.8 10.5 108 5-141 9-120 (245)
138 PRK07062 short chain dehydroge 99.5 2.1E-13 4.6E-18 98.0 13.1 123 8-152 6-145 (265)
139 PRK07067 sorbitol dehydrogenas 99.5 8.7E-14 1.9E-18 99.6 10.9 118 8-152 4-139 (257)
140 PRK06500 short chain dehydroge 99.5 1.5E-13 3.3E-18 97.7 12.1 123 8-151 4-135 (249)
141 PRK06079 enoyl-(acyl carrier p 99.5 1.4E-13 3E-18 98.5 11.9 125 7-152 4-143 (252)
142 PRK12745 3-ketoacyl-(acyl-carr 99.5 1.6E-13 3.4E-18 98.0 11.9 120 10-152 2-146 (256)
143 PRK07677 short chain dehydroge 99.5 2E-13 4.3E-18 97.5 12.4 119 10-152 1-137 (252)
144 PRK05557 fabG 3-ketoacyl-(acyl 99.5 3E-13 6.6E-18 95.8 13.2 122 8-152 3-141 (248)
145 PRK08993 2-deoxy-D-gluconate 3 99.5 3E-13 6.5E-18 96.7 13.3 119 8-152 8-144 (253)
146 PRK07791 short chain dehydroge 99.5 1.5E-13 3.3E-18 100.0 11.9 112 7-140 3-135 (286)
147 PRK07533 enoyl-(acyl carrier p 99.5 1.9E-13 4.1E-18 98.1 12.2 120 8-152 8-148 (258)
148 PRK07454 short chain dehydroge 99.5 1.6E-13 3.5E-18 97.3 11.6 120 9-152 5-141 (241)
149 PRK12747 short chain dehydroge 99.5 2.3E-13 5E-18 97.1 12.3 128 8-152 2-144 (252)
150 PRK09242 tropinone reductase; 99.5 2.3E-13 4.9E-18 97.4 12.3 129 8-152 7-146 (257)
151 PRK05565 fabG 3-ketoacyl-(acyl 99.5 2.7E-13 5.8E-18 96.2 12.5 121 8-152 3-141 (247)
152 PRK06113 7-alpha-hydroxysteroi 99.5 2.3E-13 5E-18 97.3 12.2 121 8-152 9-145 (255)
153 PRK05650 short chain dehydroge 99.5 2.2E-13 4.8E-18 98.2 12.2 118 11-152 1-135 (270)
154 PRK05875 short chain dehydroge 99.5 2.5E-13 5.4E-18 98.2 12.4 123 8-152 5-145 (276)
155 PRK06701 short chain dehydroge 99.5 3.1E-13 6.7E-18 98.7 12.9 123 7-152 43-181 (290)
156 PRK07060 short chain dehydroge 99.5 3E-13 6.4E-18 95.9 12.5 122 1-152 1-136 (245)
157 PRK07024 short chain dehydroge 99.5 1.6E-13 3.5E-18 98.3 11.2 118 10-152 2-137 (257)
158 PRK07904 short chain dehydroge 99.5 4.5E-13 9.8E-18 95.9 13.4 125 8-152 6-145 (253)
159 PRK12937 short chain dehydroge 99.5 2.2E-13 4.7E-18 96.6 11.6 122 8-152 3-139 (245)
160 PRK07577 short chain dehydroge 99.5 2.7E-13 5.9E-18 95.6 12.0 110 8-152 1-126 (234)
161 PRK05865 hypothetical protein; 99.5 1.2E-13 2.6E-18 112.3 11.3 102 11-152 1-102 (854)
162 PLN00141 Tic62-NAD(P)-related 99.5 1.2E-13 2.6E-18 98.8 10.2 119 5-152 12-131 (251)
163 PRK08416 7-alpha-hydroxysteroi 99.5 3.1E-13 6.7E-18 97.0 12.3 126 5-152 3-151 (260)
164 TIGR03325 BphB_TodD cis-2,3-di 99.5 1.5E-13 3.2E-18 98.7 10.3 124 8-152 3-141 (262)
165 PRK07035 short chain dehydroge 99.5 4E-13 8.8E-18 95.8 12.5 121 8-152 6-144 (252)
166 PRK06181 short chain dehydroge 99.5 3.1E-13 6.7E-18 97.0 11.9 119 10-152 1-136 (263)
167 PRK08945 putative oxoacyl-(acy 99.5 5.9E-13 1.3E-17 94.7 13.1 131 5-152 7-151 (247)
168 PRK12744 short chain dehydroge 99.5 3.9E-13 8.4E-18 96.3 12.2 112 8-141 6-133 (257)
169 PRK06550 fabG 3-ketoacyl-(acyl 99.5 4.8E-13 1E-17 94.4 12.5 113 8-152 3-126 (235)
170 PRK08303 short chain dehydroge 99.5 7.8E-13 1.7E-17 97.2 13.8 129 6-152 4-158 (305)
171 PRK12829 short chain dehydroge 99.5 5.3E-13 1.1E-17 95.7 12.7 121 6-152 7-146 (264)
172 PRK05693 short chain dehydroge 99.5 4.9E-13 1.1E-17 96.6 12.6 113 10-152 1-129 (274)
173 PRK09072 short chain dehydroge 99.5 3.6E-13 7.9E-18 96.7 11.9 120 8-152 3-138 (263)
174 PRK07792 fabG 3-ketoacyl-(acyl 99.5 3.3E-13 7.1E-18 99.2 11.7 112 6-140 8-132 (306)
175 PRK07370 enoyl-(acyl carrier p 99.5 3.7E-13 8E-18 96.6 11.7 123 8-152 4-147 (258)
176 PRK08251 short chain dehydroge 99.5 3.4E-13 7.4E-18 95.9 11.4 121 10-152 2-139 (248)
177 PRK06101 short chain dehydroge 99.5 4.5E-13 9.7E-18 95.1 12.0 115 10-152 1-127 (240)
178 PRK08415 enoyl-(acyl carrier p 99.5 3.2E-13 7E-18 97.8 11.3 120 8-152 3-143 (274)
179 PRK06200 2,3-dihydroxy-2,3-dih 99.5 2.5E-13 5.4E-18 97.6 10.4 118 8-152 4-142 (263)
180 PRK08220 2,3-dihydroxybenzoate 99.5 5.4E-13 1.2E-17 95.1 12.1 112 8-152 6-134 (252)
181 PRK06949 short chain dehydroge 99.5 3.4E-13 7.3E-18 96.4 11.0 115 1-140 1-129 (258)
182 PRK09134 short chain dehydroge 99.5 8.1E-13 1.8E-17 94.7 13.0 121 8-151 7-144 (258)
183 PLN02778 3,5-epimerase/4-reduc 99.5 2.2E-13 4.7E-18 99.9 10.2 93 10-151 9-109 (298)
184 PRK08936 glucose-1-dehydrogena 99.5 8E-13 1.7E-17 94.8 12.9 124 6-152 3-144 (261)
185 PRK12743 oxidoreductase; Provi 99.5 5.7E-13 1.2E-17 95.4 11.9 126 10-152 2-139 (256)
186 PRK08219 short chain dehydroge 99.5 4.2E-13 9.1E-18 94.1 11.0 115 9-152 2-128 (227)
187 PRK08703 short chain dehydroge 99.5 9.3E-13 2E-17 93.3 12.9 127 8-152 4-146 (239)
188 PRK09135 pteridine reductase; 99.5 5.9E-13 1.3E-17 94.5 11.8 112 8-141 4-129 (249)
189 PRK12384 sorbitol-6-phosphate 99.5 4.2E-13 9.2E-18 96.1 11.1 121 10-152 2-140 (259)
190 PRK08642 fabG 3-ketoacyl-(acyl 99.5 7E-13 1.5E-17 94.4 12.1 119 8-152 3-145 (253)
191 PRK08594 enoyl-(acyl carrier p 99.5 1.2E-12 2.5E-17 94.0 13.2 122 8-152 5-147 (257)
192 PRK07424 bifunctional sterol d 99.5 4.4E-13 9.6E-18 101.6 11.4 107 8-141 176-286 (406)
193 PRK08264 short chain dehydroge 99.5 8.5E-13 1.8E-17 93.3 12.3 115 8-152 4-132 (238)
194 PRK06125 short chain dehydroge 99.5 8.6E-13 1.9E-17 94.6 12.4 122 8-152 5-139 (259)
195 PRK07074 short chain dehydroge 99.5 7.9E-13 1.7E-17 94.6 12.1 117 10-152 2-135 (257)
196 PRK12742 oxidoreductase; Provi 99.5 7.9E-13 1.7E-17 93.4 11.9 117 8-152 4-131 (237)
197 PRK06505 enoyl-(acyl carrier p 99.5 5.7E-13 1.2E-17 96.4 11.3 120 8-152 5-145 (271)
198 PRK06077 fabG 3-ketoacyl-(acyl 99.5 9.7E-13 2.1E-17 93.7 12.3 128 8-152 4-140 (252)
199 PRK12748 3-ketoacyl-(acyl-carr 99.5 7.4E-13 1.6E-17 94.7 11.7 126 8-152 3-153 (256)
200 PRK06940 short chain dehydroge 99.5 7.1E-13 1.5E-17 96.0 11.7 106 10-141 2-113 (275)
201 PF13460 NAD_binding_10: NADH( 99.5 6E-13 1.3E-17 90.7 10.6 97 13-152 1-97 (183)
202 PLN02725 GDP-4-keto-6-deoxyman 99.5 1.7E-13 3.8E-18 100.2 8.5 94 14-152 1-100 (306)
203 PRK08159 enoyl-(acyl carrier p 99.5 7.3E-13 1.6E-17 95.8 11.6 122 6-152 6-148 (272)
204 PRK07023 short chain dehydroge 99.5 4.5E-13 9.8E-18 95.1 10.4 114 10-152 1-136 (243)
205 TIGR02197 heptose_epim ADP-L-g 99.5 5.1E-13 1.1E-17 98.0 10.8 108 13-152 1-113 (314)
206 PRK06057 short chain dehydroge 99.5 8.7E-13 1.9E-17 94.4 11.6 117 7-152 4-139 (255)
207 TIGR01179 galE UDP-glucose-4-e 99.5 7.9E-13 1.7E-17 97.3 11.7 115 12-152 1-120 (328)
208 PRK06198 short chain dehydroge 99.5 1.1E-12 2.4E-17 93.9 12.2 122 8-152 4-143 (260)
209 PRK07889 enoyl-(acyl carrier p 99.5 9.5E-13 2.1E-17 94.4 11.7 119 8-151 5-144 (256)
210 PRK06483 dihydromonapterin red 99.5 1.5E-12 3.3E-17 92.0 12.5 114 10-152 2-134 (236)
211 PRK12824 acetoacetyl-CoA reduc 99.5 1.3E-12 2.8E-17 92.6 12.2 119 11-152 3-138 (245)
212 PRK08690 enoyl-(acyl carrier p 99.5 8.1E-13 1.8E-17 95.0 10.9 121 7-152 3-146 (261)
213 TIGR02415 23BDH acetoin reduct 99.5 1.1E-12 2.4E-17 93.6 11.5 118 11-152 1-136 (254)
214 PRK11150 rfaD ADP-L-glycero-D- 99.5 2.6E-13 5.7E-18 99.6 8.5 107 13-152 2-115 (308)
215 PRK05855 short chain dehydroge 99.5 9.3E-13 2E-17 103.8 12.0 122 7-152 312-451 (582)
216 smart00822 PKS_KR This enzymat 99.5 1.7E-12 3.8E-17 87.1 11.8 120 11-152 1-135 (180)
217 PRK12320 hypothetical protein; 99.5 5.4E-13 1.2E-17 106.6 10.6 101 11-152 1-101 (699)
218 TIGR01289 LPOR light-dependent 99.5 1.3E-12 2.8E-17 96.4 12.0 119 10-152 3-142 (314)
219 PRK07984 enoyl-(acyl carrier p 99.5 1.9E-12 4.1E-17 93.2 12.6 120 8-152 4-145 (262)
220 PRK06484 short chain dehydroge 99.5 1.3E-12 2.8E-17 102.2 12.4 119 7-152 266-400 (520)
221 PRK07201 short chain dehydroge 99.5 1.2E-12 2.6E-17 105.0 12.4 122 7-152 368-508 (657)
222 PRK08340 glucose-1-dehydrogena 99.5 1.4E-12 3E-17 93.5 11.5 117 11-152 1-137 (259)
223 TIGR01829 AcAcCoA_reduct aceto 99.5 2.3E-12 5E-17 91.2 12.3 119 11-152 1-136 (242)
224 PRK06123 short chain dehydroge 99.5 1.5E-12 3.2E-17 92.6 11.2 109 10-141 2-125 (248)
225 PRK08261 fabG 3-ketoacyl-(acyl 99.5 1.3E-12 2.9E-17 100.6 11.8 119 7-152 207-342 (450)
226 PRK05884 short chain dehydroge 99.4 1.9E-12 4.2E-17 91.0 11.4 112 12-152 2-130 (223)
227 COG3967 DltE Short-chain dehyd 99.4 1.1E-12 2.4E-17 89.3 9.6 120 8-152 3-138 (245)
228 PRK06924 short chain dehydroge 99.4 1.3E-12 2.9E-17 93.0 10.6 117 10-152 1-140 (251)
229 PRK08862 short chain dehydroge 99.4 3.2E-12 6.8E-17 90.3 12.3 127 8-152 3-143 (227)
230 PRK06947 glucose-1-dehydrogena 99.4 1.9E-12 4.1E-17 92.1 11.3 109 10-141 2-125 (248)
231 PLN02780 ketoreductase/ oxidor 99.4 1.8E-12 3.9E-17 95.9 11.6 127 9-152 52-192 (320)
232 PF04321 RmlD_sub_bind: RmlD s 99.4 4.5E-13 9.8E-18 97.6 8.2 95 11-152 1-100 (286)
233 PRK09009 C factor cell-cell si 99.4 2.8E-12 6.1E-17 90.6 12.0 114 11-151 1-130 (235)
234 PRK07832 short chain dehydroge 99.4 2.3E-12 5E-17 93.1 11.6 119 11-152 1-137 (272)
235 PRK12859 3-ketoacyl-(acyl-carr 99.4 3.9E-12 8.5E-17 91.1 12.6 127 8-152 4-154 (256)
236 PRK06603 enoyl-(acyl carrier p 99.4 2.5E-12 5.4E-17 92.4 11.6 121 7-152 5-146 (260)
237 PRK06997 enoyl-(acyl carrier p 99.4 2.7E-12 5.8E-17 92.3 11.4 121 7-152 3-145 (260)
238 KOG1208|consensus 99.4 5.9E-13 1.3E-17 97.8 8.1 129 7-152 32-170 (314)
239 TIGR01214 rmlD dTDP-4-dehydror 99.4 1.2E-12 2.6E-17 95.0 9.5 94 12-152 1-99 (287)
240 PRK09730 putative NAD(P)-bindi 99.4 2.7E-12 6E-17 91.0 11.0 119 10-152 1-141 (247)
241 TIGR01830 3oxo_ACP_reduc 3-oxo 99.4 3.7E-12 8.1E-17 89.9 11.6 117 13-152 1-134 (239)
242 PRK07831 short chain dehydroge 99.4 6.5E-12 1.4E-16 90.2 12.9 124 7-152 14-156 (262)
243 PRK06953 short chain dehydroge 99.4 3.7E-12 8.1E-17 89.3 11.0 113 10-152 1-129 (222)
244 KOG1200|consensus 99.4 4.8E-12 1E-16 85.7 10.8 127 7-152 11-150 (256)
245 PRK06484 short chain dehydroge 99.4 4.8E-12 1E-16 99.1 12.6 118 8-152 3-140 (520)
246 PRK08177 short chain dehydroge 99.4 3E-12 6.5E-17 90.0 9.9 114 10-152 1-130 (225)
247 PRK07069 short chain dehydroge 99.4 1E-11 2.2E-16 88.4 12.6 119 12-152 1-137 (251)
248 TIGR01831 fabG_rel 3-oxoacyl-( 99.4 7.4E-12 1.6E-16 88.6 11.6 117 13-152 1-135 (239)
249 PRK07041 short chain dehydroge 99.4 4.7E-12 1E-16 89.1 10.5 113 14-152 1-123 (230)
250 KOG0725|consensus 99.4 1.3E-11 2.8E-16 89.2 12.7 131 7-152 5-149 (270)
251 PRK08217 fabG 3-ketoacyl-(acyl 99.4 9.1E-12 2E-16 88.6 11.7 121 8-152 3-150 (253)
252 PLN00015 protochlorophyllide r 99.4 8.1E-12 1.7E-16 91.9 10.9 115 14-152 1-136 (308)
253 TIGR02632 RhaD_aldol-ADH rhamn 99.4 1.3E-11 2.8E-16 99.4 12.8 124 7-152 411-552 (676)
254 PRK08324 short chain dehydroge 99.4 8.1E-12 1.8E-16 100.7 11.5 120 8-152 420-557 (681)
255 PRK07578 short chain dehydroge 99.4 1.3E-11 2.7E-16 85.3 10.9 100 11-152 1-111 (199)
256 COG1091 RfbD dTDP-4-dehydrorha 99.4 5.3E-12 1.1E-16 90.7 9.1 93 12-152 2-99 (281)
257 TIGR01777 yfcH conserved hypot 99.4 7.3E-12 1.6E-16 90.9 10.1 104 13-152 1-111 (292)
258 PRK05599 hypothetical protein; 99.4 2.2E-11 4.7E-16 86.9 11.9 124 11-152 1-136 (246)
259 PRK08017 oxidoreductase; Provi 99.4 2.3E-11 4.9E-16 86.9 12.0 111 11-152 3-132 (256)
260 KOG4169|consensus 99.3 6.9E-12 1.5E-16 86.7 8.5 110 8-141 3-119 (261)
261 PRK05786 fabG 3-ketoacyl-(acyl 99.3 2.3E-11 4.9E-16 86.0 11.4 119 8-152 3-135 (238)
262 TIGR01500 sepiapter_red sepiap 99.3 2.4E-11 5.2E-16 87.0 11.6 119 12-152 2-150 (256)
263 PLN02730 enoyl-[acyl-carrier-p 99.3 3.7E-11 8.1E-16 88.2 12.1 138 8-152 7-178 (303)
264 TIGR03649 ergot_EASG ergot alk 99.3 2E-11 4.3E-16 88.7 9.4 97 12-152 1-104 (285)
265 PLN02260 probable rhamnose bio 99.3 2.5E-11 5.4E-16 97.8 10.2 93 9-150 379-479 (668)
266 KOG1429|consensus 99.3 7.3E-12 1.6E-16 89.2 6.2 112 9-152 26-140 (350)
267 TIGR02813 omega_3_PfaA polyket 99.3 5.3E-11 1.2E-15 105.8 12.5 135 9-152 1996-2175(2582)
268 PLN00016 RNA-binding protein; 99.3 4.3E-11 9.2E-16 90.4 10.5 103 9-152 51-164 (378)
269 TIGR02685 pter_reduc_Leis pter 99.3 9.4E-11 2E-15 84.5 11.8 115 11-141 2-139 (267)
270 PF05368 NmrA: NmrA-like famil 99.3 5.9E-11 1.3E-15 83.9 9.8 102 13-152 1-102 (233)
271 KOG2865|consensus 99.2 2.2E-11 4.8E-16 86.9 6.7 119 7-152 58-176 (391)
272 COG1089 Gmd GDP-D-mannose dehy 99.2 3.8E-11 8.3E-16 85.6 7.3 123 10-152 2-130 (345)
273 PRK06720 hypothetical protein; 99.2 2.9E-10 6.3E-15 76.8 11.1 85 8-116 14-105 (169)
274 KOG1611|consensus 99.2 1.9E-10 4.1E-15 79.5 9.7 116 9-140 2-128 (249)
275 COG1028 FabG Dehydrogenases wi 99.2 7.3E-10 1.6E-14 78.9 12.6 129 8-152 3-142 (251)
276 KOG1610|consensus 99.2 4.1E-10 8.8E-15 81.4 10.4 120 7-152 26-164 (322)
277 KOG0747|consensus 99.2 5.5E-11 1.2E-15 84.7 5.3 121 10-152 6-131 (331)
278 KOG1207|consensus 99.1 1.5E-10 3.2E-15 77.3 5.2 119 7-152 4-136 (245)
279 KOG1209|consensus 99.1 6.5E-10 1.4E-14 76.5 7.7 117 9-151 6-137 (289)
280 COG1090 Predicted nucleoside-d 99.1 1.2E-09 2.7E-14 77.7 9.4 102 13-151 1-109 (297)
281 PRK06300 enoyl-(acyl carrier p 99.1 3.2E-09 6.9E-14 77.9 11.4 141 7-151 5-176 (299)
282 KOG1014|consensus 99.1 1.4E-09 3.1E-14 78.5 9.1 124 10-152 49-186 (312)
283 KOG1210|consensus 99.0 9.6E-09 2.1E-13 74.4 10.3 120 11-152 34-171 (331)
284 KOG1199|consensus 98.9 1.3E-09 2.8E-14 72.8 4.7 108 6-140 5-132 (260)
285 KOG4039|consensus 98.9 7.3E-09 1.6E-13 69.4 7.7 115 8-152 16-130 (238)
286 PTZ00325 malate dehydrogenase; 98.9 3.8E-08 8.3E-13 72.8 11.9 119 7-152 5-124 (321)
287 COG0702 Predicted nucleoside-d 98.9 2.5E-08 5.5E-13 71.7 9.9 106 11-152 1-106 (275)
288 KOG1478|consensus 98.9 2E-08 4.3E-13 70.9 8.6 132 10-152 3-174 (341)
289 KOG1431|consensus 98.8 1.4E-08 2.9E-13 70.7 6.0 99 10-151 1-105 (315)
290 PF13561 adh_short_C2: Enoyl-( 98.8 3.7E-08 8.1E-13 69.9 8.2 117 17-152 1-133 (241)
291 PLN00106 malate dehydrogenase 98.7 2.4E-07 5.3E-12 68.6 11.0 114 11-151 19-133 (323)
292 cd01336 MDH_cytoplasmic_cytoso 98.7 2.7E-07 5.9E-12 68.5 11.2 109 11-142 3-117 (325)
293 PRK08309 short chain dehydroge 98.7 1.4E-07 3E-12 64.2 8.3 99 11-151 1-110 (177)
294 COG2910 Putative NADH-flavin r 98.6 5.3E-07 1.2E-11 60.9 9.8 103 11-151 1-103 (211)
295 PRK09620 hypothetical protein; 98.6 2.6E-07 5.7E-12 65.3 8.0 80 8-117 1-100 (229)
296 PRK06732 phosphopantothenate-- 98.6 5.3E-07 1.2E-11 63.8 8.3 75 14-117 19-94 (229)
297 KOG1203|consensus 98.5 4.6E-07 1E-11 68.5 7.6 122 6-152 75-200 (411)
298 PRK12428 3-alpha-hydroxysteroi 98.5 5.2E-07 1.1E-11 64.2 6.1 91 26-152 1-96 (241)
299 PRK13656 trans-2-enoyl-CoA red 98.4 1.3E-06 2.9E-11 65.8 8.4 91 9-115 40-142 (398)
300 cd00704 MDH Malate dehydrogena 98.4 4.6E-06 9.9E-11 62.0 11.2 112 12-151 2-125 (323)
301 PRK05086 malate dehydrogenase; 98.4 6.3E-06 1.4E-10 61.0 11.4 115 11-151 1-116 (312)
302 KOG1372|consensus 98.4 1.7E-06 3.6E-11 61.3 6.7 116 9-142 27-147 (376)
303 PRK05579 bifunctional phosphop 98.4 1.6E-06 3.4E-11 66.1 7.0 79 8-117 186-280 (399)
304 COG0623 FabI Enoyl-[acyl-carri 98.3 1.4E-05 3E-10 56.0 10.4 116 7-141 3-132 (259)
305 KOG1204|consensus 98.3 1.1E-06 2.4E-11 61.2 4.9 122 9-152 5-144 (253)
306 TIGR01758 MDH_euk_cyt malate d 98.3 1.8E-05 3.8E-10 58.9 11.3 112 12-151 1-124 (324)
307 PRK14982 acyl-ACP reductase; P 98.3 3.1E-06 6.8E-11 63.0 7.0 39 7-46 152-190 (340)
308 PRK12548 shikimate 5-dehydroge 98.2 6.5E-06 1.4E-10 60.3 7.9 85 8-114 124-209 (289)
309 cd01078 NAD_bind_H4MPT_DH NADP 98.2 5.7E-06 1.2E-10 57.0 7.1 82 8-114 26-107 (194)
310 COG1748 LYS9 Saccharopine dehy 98.2 1.4E-05 3.1E-10 60.4 9.3 79 10-115 1-79 (389)
311 PF03435 Saccharop_dh: Sacchar 98.1 2.4E-05 5.3E-10 59.5 9.4 78 13-115 1-78 (386)
312 PF00056 Ldh_1_N: lactate/mala 98.1 0.00042 9E-09 45.5 13.2 116 11-151 1-117 (141)
313 TIGR02114 coaB_strep phosphopa 98.1 6E-06 1.3E-10 58.4 4.5 29 14-45 18-47 (227)
314 KOG2774|consensus 97.9 8.3E-06 1.8E-10 57.4 3.1 109 10-149 44-156 (366)
315 KOG4288|consensus 97.9 3.6E-05 7.8E-10 54.0 5.1 109 11-152 53-161 (283)
316 cd01338 MDH_choloroplast_like 97.8 0.00048 1E-08 51.3 11.1 118 11-151 3-127 (322)
317 TIGR00521 coaBC_dfp phosphopan 97.8 7.3E-05 1.6E-09 56.9 6.8 75 8-117 183-278 (390)
318 PF04127 DFP: DNA / pantothena 97.8 0.00012 2.5E-09 50.2 7.2 79 8-117 1-95 (185)
319 PF01488 Shikimate_DH: Shikima 97.8 7.4E-05 1.6E-09 48.6 6.0 81 5-116 7-87 (135)
320 cd05294 LDH-like_MDH_nadp A la 97.8 0.0003 6.6E-09 52.0 9.6 110 11-142 1-111 (309)
321 TIGR01759 MalateDH-SF1 malate 97.7 0.00046 9.9E-09 51.4 9.9 110 11-143 4-119 (323)
322 KOG1494|consensus 97.7 0.00052 1.1E-08 49.6 9.6 108 8-142 26-135 (345)
323 TIGR00715 precor6x_red precorr 97.7 0.00034 7.4E-09 50.4 8.6 34 11-48 1-34 (256)
324 KOG2733|consensus 97.7 8.9E-05 1.9E-09 55.1 5.6 85 12-116 7-95 (423)
325 PRK14106 murD UDP-N-acetylmura 97.7 0.00037 8.1E-09 54.0 9.1 77 8-115 3-79 (450)
326 PF01118 Semialdhyde_dh: Semia 97.7 0.00026 5.6E-09 45.1 6.5 35 12-47 1-35 (121)
327 cd01337 MDH_glyoxysomal_mitoch 97.7 0.0021 4.6E-08 47.6 12.1 106 11-142 1-107 (310)
328 PRK05442 malate dehydrogenase; 97.6 0.0012 2.6E-08 49.2 10.8 117 9-151 3-129 (326)
329 PRK14874 aspartate-semialdehyd 97.5 0.0004 8.7E-09 52.0 6.5 39 10-48 1-39 (334)
330 PRK07688 thiamine/molybdopteri 97.5 0.0013 2.9E-08 49.3 9.0 40 5-47 19-58 (339)
331 TIGR01772 MDH_euk_gproteo mala 97.4 0.003 6.6E-08 46.8 10.4 105 12-142 1-106 (312)
332 PRK00066 ldh L-lactate dehydro 97.4 0.0038 8.3E-08 46.4 10.6 107 9-142 5-112 (315)
333 cd05291 HicDH_like L-2-hydroxy 97.3 0.006 1.3E-07 45.1 11.1 114 11-151 1-116 (306)
334 PRK12475 thiamine/molybdopteri 97.3 0.0012 2.6E-08 49.5 6.7 40 5-47 19-58 (338)
335 PTZ00117 malate dehydrogenase; 97.2 0.011 2.4E-07 44.0 11.4 109 8-142 3-112 (319)
336 PRK08223 hypothetical protein; 97.2 0.0045 9.8E-08 45.3 8.7 96 5-112 22-125 (287)
337 cd05290 LDH_3 A subgroup of L- 97.1 0.016 3.5E-07 43.0 11.5 106 12-143 1-110 (307)
338 TIGR02356 adenyl_thiF thiazole 97.1 0.0015 3.2E-08 45.4 5.6 40 5-47 16-55 (202)
339 COG0039 Mdh Malate/lactate deh 97.1 0.019 4.2E-07 42.5 11.5 106 11-142 1-108 (313)
340 TIGR01296 asd_B aspartate-semi 97.1 0.0014 3.1E-08 49.1 5.7 36 12-47 1-36 (339)
341 TIGR02354 thiF_fam2 thiamine b 97.1 0.0016 3.5E-08 45.2 5.6 40 4-46 15-54 (200)
342 PRK06223 malate dehydrogenase; 97.1 0.017 3.8E-07 42.6 11.1 107 10-142 2-109 (307)
343 KOG1202|consensus 97.1 0.00095 2.1E-08 56.8 4.7 123 9-152 1767-1904(2376)
344 cd05293 LDH_1 A subgroup of L- 97.0 0.017 3.6E-07 43.0 10.8 105 11-142 4-110 (312)
345 PRK08644 thiamine biosynthesis 97.0 0.0023 5.1E-08 44.8 5.9 40 5-47 23-62 (212)
346 PRK05690 molybdopterin biosynt 97.0 0.0047 1E-07 44.3 7.6 40 5-47 27-66 (245)
347 PLN00112 malate dehydrogenase 97.0 0.019 4.2E-07 44.6 11.2 117 11-152 101-226 (444)
348 cd00650 LDH_MDH_like NAD-depen 96.9 0.031 6.6E-07 40.4 11.2 106 13-142 1-109 (263)
349 cd00757 ThiF_MoeB_HesA_family 96.9 0.0046 9.9E-08 43.8 6.8 40 5-47 16-55 (228)
350 cd05295 MDH_like Malate dehydr 96.9 0.011 2.3E-07 46.0 9.1 111 11-143 124-239 (452)
351 PRK13982 bifunctional SbtC-lik 96.9 0.003 6.5E-08 49.3 5.9 78 8-117 254-347 (475)
352 TIGR02355 moeB molybdopterin s 96.8 0.0091 2E-07 42.7 7.8 41 5-48 19-59 (240)
353 PLN02383 aspartate semialdehyd 96.8 0.0054 1.2E-07 46.1 6.8 38 9-46 6-43 (344)
354 PLN02819 lysine-ketoglutarate 96.8 0.016 3.4E-07 49.5 10.0 79 9-114 568-658 (1042)
355 PLN02968 Probable N-acetyl-gam 96.8 0.0035 7.6E-08 47.8 5.5 37 9-47 37-73 (381)
356 PF00899 ThiF: ThiF family; I 96.8 0.0076 1.6E-07 39.0 6.4 92 10-113 2-101 (135)
357 PRK08762 molybdopterin biosynt 96.7 0.005 1.1E-07 46.9 6.1 38 6-46 131-168 (376)
358 PTZ00082 L-lactate dehydrogena 96.7 0.044 9.6E-07 40.9 10.9 117 9-151 5-127 (321)
359 PLN02602 lactate dehydrogenase 96.7 0.054 1.2E-06 40.9 11.3 105 11-142 38-144 (350)
360 PRK05597 molybdopterin biosynt 96.7 0.011 2.4E-07 44.7 7.7 40 5-47 23-62 (355)
361 PF02826 2-Hacid_dh_C: D-isome 96.7 0.031 6.7E-07 38.0 9.2 93 7-112 33-127 (178)
362 PRK07878 molybdopterin biosynt 96.7 0.028 6.1E-07 43.1 9.8 39 6-47 38-76 (392)
363 PRK09496 trkA potassium transp 96.7 0.012 2.7E-07 45.6 8.0 72 11-112 1-73 (453)
364 TIGR01757 Malate-DH_plant mala 96.6 0.083 1.8E-06 40.4 11.8 117 11-152 45-170 (387)
365 PRK05671 aspartate-semialdehyd 96.6 0.0048 1E-07 46.3 5.1 37 10-46 4-40 (336)
366 PRK02472 murD UDP-N-acetylmura 96.6 0.027 5.9E-07 43.7 9.2 36 8-47 3-38 (447)
367 COG0111 SerA Phosphoglycerate 96.5 0.022 4.7E-07 42.6 8.1 87 8-112 140-233 (324)
368 cd01065 NAD_bind_Shikimate_DH 96.5 0.011 2.3E-07 39.0 5.9 37 8-47 17-53 (155)
369 PRK08328 hypothetical protein; 96.5 0.022 4.9E-07 40.4 7.7 40 5-47 22-61 (231)
370 PRK05600 thiamine biosynthesis 96.5 0.017 3.7E-07 43.9 7.5 40 5-47 36-75 (370)
371 cd01492 Aos1_SUMO Ubiquitin ac 96.5 0.027 5.7E-07 39.1 7.8 40 5-47 16-55 (197)
372 TIGR01763 MalateDH_bact malate 96.4 0.09 1.9E-06 39.0 10.7 115 11-151 2-117 (305)
373 PRK08410 2-hydroxyacid dehydro 96.4 0.037 8E-07 41.1 8.5 88 7-112 142-232 (311)
374 cd01483 E1_enzyme_family Super 96.4 0.052 1.1E-06 35.4 8.4 33 12-47 1-33 (143)
375 PRK00436 argC N-acetyl-gamma-g 96.3 0.021 4.5E-07 43.0 7.2 34 10-45 2-35 (343)
376 PRK12749 quinate/shikimate deh 96.3 0.03 6.5E-07 41.2 7.7 38 8-48 122-159 (288)
377 COG3268 Uncharacterized conser 96.3 0.0042 9.1E-08 46.1 3.2 77 11-116 7-83 (382)
378 cd01487 E1_ThiF_like E1_ThiF_l 96.3 0.025 5.4E-07 38.4 6.7 89 12-112 1-96 (174)
379 PRK00048 dihydrodipicolinate r 96.3 0.032 6.8E-07 40.3 7.5 35 11-46 2-36 (257)
380 PRK07411 hypothetical protein; 96.2 0.028 6E-07 43.1 7.4 97 5-113 33-137 (390)
381 PRK08040 putative semialdehyde 96.2 0.018 3.9E-07 43.2 6.2 38 9-46 3-40 (336)
382 TIGR01850 argC N-acetyl-gamma- 96.2 0.024 5.3E-07 42.7 6.9 33 11-45 1-34 (346)
383 PRK14851 hypothetical protein; 96.2 0.028 6.1E-07 46.0 7.6 96 5-112 38-141 (679)
384 COG0002 ArgC Acetylglutamate s 96.2 0.019 4.1E-07 42.9 6.1 35 10-46 2-36 (349)
385 cd01080 NAD_bind_m-THF_DH_Cycl 96.2 0.031 6.8E-07 37.7 6.7 37 7-46 41-77 (168)
386 cd05292 LDH_2 A subgroup of L- 96.1 0.18 4E-06 37.4 11.1 105 11-142 1-106 (308)
387 cd01485 E1-1_like Ubiquitin ac 96.1 0.045 9.7E-07 38.0 7.2 40 5-47 14-53 (198)
388 PRK13940 glutamyl-tRNA reducta 96.0 0.035 7.7E-07 42.9 7.2 39 6-47 177-215 (414)
389 TIGR01771 L-LDH-NAD L-lactate 96.0 0.22 4.8E-06 36.9 10.9 111 15-151 1-112 (299)
390 PF01113 DapB_N: Dihydrodipico 95.9 0.032 7E-07 35.6 5.7 36 11-47 1-36 (124)
391 KOG1198|consensus 95.9 0.045 9.9E-07 41.3 7.1 29 6-34 154-182 (347)
392 PRK14192 bifunctional 5,10-met 95.9 0.041 8.8E-07 40.4 6.6 35 8-45 157-191 (283)
393 PRK13243 glyoxylate reductase; 95.9 0.067 1.4E-06 40.2 7.9 36 8-47 148-183 (333)
394 cd01489 Uba2_SUMO Ubiquitin ac 95.9 0.095 2.1E-06 39.0 8.6 90 12-112 1-98 (312)
395 PRK06718 precorrin-2 dehydroge 95.9 0.1 2.2E-06 36.3 8.3 37 5-45 5-41 (202)
396 COG0604 Qor NADPH:quinone redu 95.8 0.024 5.2E-07 42.4 5.3 35 9-45 142-176 (326)
397 TIGR01809 Shik-DH-AROM shikima 95.8 0.037 8E-07 40.5 6.2 37 8-47 123-159 (282)
398 PRK06932 glycerate dehydrogena 95.8 0.11 2.3E-06 38.8 8.6 88 7-112 144-233 (314)
399 PRK08664 aspartate-semialdehyd 95.8 0.018 3.9E-07 43.5 4.6 35 10-46 3-37 (349)
400 PRK12549 shikimate 5-dehydroge 95.8 0.057 1.2E-06 39.6 7.0 37 8-47 125-161 (284)
401 COG0569 TrkA K+ transport syst 95.7 0.044 9.5E-07 38.8 6.2 74 11-113 1-75 (225)
402 PRK06487 glycerate dehydrogena 95.7 0.13 2.7E-06 38.4 8.8 88 7-112 145-233 (317)
403 cd00755 YgdL_like Family of ac 95.7 0.076 1.6E-06 37.8 7.3 40 5-47 6-45 (231)
404 PRK14175 bifunctional 5,10-met 95.7 0.064 1.4E-06 39.4 7.0 36 7-45 155-190 (286)
405 PRK14027 quinate/shikimate deh 95.7 0.063 1.4E-06 39.4 7.0 37 8-47 125-161 (283)
406 PRK14852 hypothetical protein; 95.7 0.059 1.3E-06 45.7 7.4 97 5-113 327-431 (989)
407 PF02254 TrkA_N: TrkA-N domain 95.6 0.12 2.7E-06 32.1 7.5 69 13-112 1-70 (116)
408 COG1052 LdhA Lactate dehydroge 95.6 0.083 1.8E-06 39.5 7.5 38 7-48 143-180 (324)
409 PRK06728 aspartate-semialdehyd 95.6 0.053 1.2E-06 40.9 6.4 38 9-46 4-42 (347)
410 PLN02928 oxidoreductase family 95.6 0.099 2.2E-06 39.5 7.8 36 7-46 156-191 (347)
411 PRK00258 aroE shikimate 5-dehy 95.5 0.029 6.4E-07 40.9 4.9 37 8-47 121-157 (278)
412 PRK06598 aspartate-semialdehyd 95.5 0.037 8.1E-07 42.0 5.5 36 11-46 2-38 (369)
413 PRK06436 glycerate dehydrogena 95.5 0.12 2.6E-06 38.3 8.0 37 7-47 119-155 (303)
414 cd00300 LDH_like L-lactate deh 95.5 0.39 8.4E-06 35.5 10.6 104 13-142 1-105 (300)
415 COG0136 Asd Aspartate-semialde 95.5 0.057 1.2E-06 40.3 6.1 38 10-47 1-38 (334)
416 TIGR02853 spore_dpaA dipicolin 95.4 0.066 1.4E-06 39.4 6.3 37 7-47 148-184 (287)
417 PRK15116 sulfur acceptor prote 95.4 0.15 3.2E-06 37.1 8.0 39 6-47 26-64 (268)
418 PF02882 THF_DHG_CYH_C: Tetrah 95.4 0.12 2.5E-06 34.7 6.9 34 8-44 34-67 (160)
419 cd01339 LDH-like_MDH L-lactate 95.4 0.3 6.4E-06 36.1 9.7 104 13-142 1-105 (300)
420 PLN02306 hydroxypyruvate reduc 95.4 0.21 4.6E-06 38.3 9.1 36 8-47 163-199 (386)
421 PRK06153 hypothetical protein; 95.3 0.044 9.5E-07 41.8 5.1 40 5-47 171-210 (393)
422 TIGR01915 npdG NADPH-dependent 95.3 0.036 7.8E-07 38.9 4.4 34 11-47 1-34 (219)
423 PRK15409 bifunctional glyoxyla 95.2 0.15 3.3E-06 38.1 7.8 36 8-47 143-179 (323)
424 PLN00203 glutamyl-tRNA reducta 95.2 0.1 2.2E-06 41.6 7.1 37 8-47 264-300 (519)
425 PRK15438 erythronate-4-phospha 95.2 0.21 4.6E-06 38.2 8.5 87 8-112 114-207 (378)
426 PRK07574 formate dehydrogenase 95.1 0.091 2E-06 40.3 6.3 36 8-47 190-225 (385)
427 PRK11790 D-3-phosphoglycerate 95.1 0.21 4.6E-06 38.6 8.4 36 8-47 149-184 (409)
428 PRK07877 hypothetical protein; 95.0 0.093 2E-06 43.4 6.6 97 5-113 102-205 (722)
429 PRK04148 hypothetical protein; 95.0 0.3 6.6E-06 31.7 7.8 69 9-111 16-84 (134)
430 TIGR01381 E1_like_apg7 E1-like 95.0 0.23 4.9E-06 40.5 8.5 39 6-47 334-372 (664)
431 cd01484 E1-2_like Ubiquitin ac 95.0 0.23 5.1E-06 35.4 7.8 33 12-47 1-33 (234)
432 PLN02520 bifunctional 3-dehydr 94.9 0.047 1E-06 43.6 4.6 35 8-46 377-411 (529)
433 PRK15469 ghrA bifunctional gly 94.8 0.17 3.6E-06 37.7 7.0 36 8-47 134-169 (312)
434 PRK09496 trkA potassium transp 94.8 0.2 4.3E-06 38.9 7.7 75 9-112 230-305 (453)
435 PRK06901 aspartate-semialdehyd 94.7 0.047 1E-06 40.6 3.8 35 11-46 4-38 (322)
436 cd01079 NAD_bind_m-THF_DH NAD 94.7 0.27 5.8E-06 34.1 7.2 34 8-44 60-93 (197)
437 PRK06849 hypothetical protein; 94.6 0.079 1.7E-06 40.5 5.0 36 9-47 3-38 (389)
438 cd01075 NAD_bind_Leu_Phe_Val_D 94.6 0.086 1.9E-06 36.6 4.7 37 6-46 24-60 (200)
439 PLN03139 formate dehydrogenase 94.6 0.16 3.5E-06 38.9 6.6 37 7-47 196-232 (386)
440 cd01488 Uba3_RUB Ubiquitin act 94.5 0.37 8E-06 35.5 8.1 88 12-112 1-96 (291)
441 PRK14194 bifunctional 5,10-met 94.5 0.18 3.8E-06 37.3 6.4 36 8-46 157-192 (301)
442 TIGR01745 asd_gamma aspartate- 94.5 0.12 2.7E-06 39.2 5.7 37 11-47 1-38 (366)
443 PRK08306 dipicolinate synthase 94.5 0.039 8.4E-07 40.7 2.9 36 8-47 150-185 (296)
444 PRK01710 murD UDP-N-acetylmura 94.4 0.35 7.5E-06 37.9 8.3 40 4-47 8-47 (458)
445 PRK00045 hemA glutamyl-tRNA re 94.4 0.13 2.8E-06 39.9 5.9 37 8-47 180-216 (423)
446 PF00670 AdoHcyase_NAD: S-aden 94.4 0.38 8.3E-06 32.3 7.3 35 7-45 20-54 (162)
447 cd01486 Apg7 Apg7 is an E1-lik 94.3 0.59 1.3E-05 34.7 8.7 32 12-46 1-32 (307)
448 TIGR01035 hemA glutamyl-tRNA r 94.3 0.15 3.3E-06 39.5 5.9 38 7-47 177-214 (417)
449 TIGR00518 alaDH alanine dehydr 94.2 0.36 7.9E-06 36.8 7.8 35 8-46 165-199 (370)
450 PRK14188 bifunctional 5,10-met 94.2 0.24 5.2E-06 36.6 6.6 36 8-46 156-192 (296)
451 cd05213 NAD_bind_Glutamyl_tRNA 94.0 0.2 4.3E-06 37.3 5.9 37 8-47 176-212 (311)
452 KOG4022|consensus 94.0 1.3 2.8E-05 30.1 9.0 33 9-41 2-34 (236)
453 PRK13581 D-3-phosphoglycerate 94.0 0.44 9.5E-06 38.1 8.1 36 8-47 138-173 (526)
454 PRK14185 bifunctional 5,10-met 93.9 0.3 6.4E-06 36.0 6.5 27 8-34 155-181 (293)
455 PRK00257 erythronate-4-phospha 93.9 0.59 1.3E-05 35.8 8.4 36 7-46 113-148 (381)
456 TIGR00507 aroE shikimate 5-deh 93.9 0.13 2.8E-06 37.4 4.7 35 9-47 116-150 (270)
457 TIGR01327 PGDH D-3-phosphoglyc 93.9 0.42 9.2E-06 38.2 7.9 35 8-46 136-170 (525)
458 PRK14176 bifunctional 5,10-met 93.7 0.37 8.1E-06 35.4 6.7 28 8-35 162-189 (287)
459 COG2085 Predicted dinucleotide 93.7 0.14 3E-06 35.8 4.3 34 10-47 1-34 (211)
460 PRK08655 prephenate dehydrogen 93.7 0.12 2.6E-06 40.3 4.4 34 11-47 1-34 (437)
461 TIGR03693 ocin_ThiF_like putat 93.7 0.39 8.5E-06 38.9 7.2 89 7-114 126-214 (637)
462 PRK04308 murD UDP-N-acetylmura 93.6 0.77 1.7E-05 35.7 8.8 37 8-48 3-39 (445)
463 KOG2013|consensus 93.6 0.33 7.1E-06 38.1 6.4 38 6-46 8-45 (603)
464 PRK14173 bifunctional 5,10-met 93.6 0.36 7.8E-06 35.5 6.4 28 8-35 153-180 (287)
465 PRK14193 bifunctional 5,10-met 93.6 0.37 8E-06 35.4 6.5 26 8-33 156-181 (284)
466 PRK05476 S-adenosyl-L-homocyst 93.5 0.18 4E-06 39.1 5.1 36 8-47 210-245 (425)
467 cd05191 NAD_bind_amino_acid_DH 93.5 0.25 5.4E-06 29.3 4.7 35 8-45 21-55 (86)
468 PRK14186 bifunctional 5,10-met 93.5 0.38 8.2E-06 35.6 6.5 28 8-35 156-183 (297)
469 PRK10792 bifunctional 5,10-met 93.5 0.47 1E-05 34.9 6.9 34 8-44 157-190 (285)
470 PRK12480 D-lactate dehydrogena 93.5 0.28 6E-06 36.8 5.9 37 7-47 143-179 (330)
471 cd05212 NAD_bind_m-THF_DH_Cycl 93.4 0.59 1.3E-05 30.6 6.7 36 7-45 25-60 (140)
472 PRK14169 bifunctional 5,10-met 93.4 0.42 9.1E-06 35.1 6.5 28 8-35 154-181 (282)
473 PRK14180 bifunctional 5,10-met 93.3 0.43 9.3E-06 35.0 6.5 29 7-35 155-183 (282)
474 PRK14170 bifunctional 5,10-met 93.3 0.42 9E-06 35.1 6.3 28 8-35 155-182 (284)
475 PRK08605 D-lactate dehydrogena 93.2 1.1 2.5E-05 33.6 8.9 38 7-47 143-180 (332)
476 PRK11199 tyrA bifunctional cho 93.2 0.15 3.4E-06 38.8 4.3 36 9-47 97-132 (374)
477 PRK14191 bifunctional 5,10-met 93.2 0.51 1.1E-05 34.7 6.7 28 8-35 155-182 (285)
478 PRK14177 bifunctional 5,10-met 93.1 0.53 1.1E-05 34.6 6.7 29 7-35 156-184 (284)
479 PRK06444 prephenate dehydrogen 93.1 0.088 1.9E-06 36.5 2.6 27 11-37 1-27 (197)
480 PRK07634 pyrroline-5-carboxyla 93.1 0.62 1.3E-05 33.1 7.1 38 8-46 2-40 (245)
481 TIGR01470 cysG_Nterm siroheme 93.1 0.75 1.6E-05 32.1 7.3 34 8-45 7-40 (205)
482 PRK14189 bifunctional 5,10-met 93.1 0.51 1.1E-05 34.7 6.6 33 8-43 156-188 (285)
483 PRK14179 bifunctional 5,10-met 93.1 0.42 9E-06 35.1 6.1 29 8-36 156-184 (284)
484 PF00070 Pyr_redox: Pyridine n 93.0 0.38 8.2E-06 27.9 4.9 34 12-49 1-34 (80)
485 PF02670 DXP_reductoisom: 1-de 93.0 0.24 5.2E-06 32.0 4.3 47 13-60 1-47 (129)
486 TIGR00978 asd_EA aspartate-sem 93.0 0.17 3.7E-06 38.1 4.2 31 11-43 1-31 (341)
487 PRK14172 bifunctional 5,10-met 92.9 0.61 1.3E-05 34.2 6.8 28 8-35 156-183 (278)
488 PRK10669 putative cation:proto 92.9 0.51 1.1E-05 38.0 7.0 70 11-111 418-488 (558)
489 PRK06019 phosphoribosylaminoim 92.9 0.48 1E-05 36.1 6.5 35 10-48 2-36 (372)
490 PRK13304 L-aspartate dehydroge 92.8 2.7 5.7E-05 30.5 10.0 35 11-46 2-36 (265)
491 PF10727 Rossmann-like: Rossma 92.8 0.03 6.4E-07 36.1 -0.1 28 9-37 9-36 (127)
492 PRK14190 bifunctional 5,10-met 92.8 0.66 1.4E-05 34.1 6.8 33 8-43 156-188 (284)
493 cd05311 NAD_bind_2_malic_enz N 92.7 0.26 5.7E-06 34.9 4.6 39 8-47 23-61 (226)
494 PRK11863 N-acetyl-gamma-glutam 92.7 0.23 5.1E-06 37.0 4.5 34 10-45 2-35 (313)
495 TIGR01851 argC_other N-acetyl- 92.7 0.19 4.1E-06 37.4 3.9 34 11-45 2-35 (310)
496 PRK14181 bifunctional 5,10-met 92.7 0.62 1.4E-05 34.3 6.5 26 8-33 151-176 (287)
497 PRK14171 bifunctional 5,10-met 92.6 0.58 1.3E-05 34.4 6.4 28 8-35 157-184 (288)
498 KOG0023|consensus 92.6 0.7 1.5E-05 34.6 6.7 45 9-59 181-225 (360)
499 PRK08057 cobalt-precorrin-6x r 92.5 2.7 5.9E-05 30.3 9.5 70 10-112 2-73 (248)
500 PRK14182 bifunctional 5,10-met 92.4 0.68 1.5E-05 34.0 6.4 28 8-35 155-182 (282)
No 1
>PLN02996 fatty acyl-CoA reductase
Probab=99.91 E-value=5.1e-23 Score=159.24 Aligned_cols=151 Identities=30% Similarity=0.506 Sum_probs=125.0
Q ss_pred cccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccc-----c
Q psy11862 2 GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPA-----Q 75 (152)
Q Consensus 2 ~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~ 75 (152)
+.+.+.+++++++|||||||+|+++++.|++.++++.+|+++.|.+...+..+++. ++.....++.++...+. .
T Consensus 3 ~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~ 82 (491)
T PLN02996 3 GSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLI 82 (491)
T ss_pred ccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhh
Confidence 34667889999999999999999999999998888899999999988888888875 55554444444332221 1
Q ss_pred CCcEEEEEcccCCCCCCCChhH-HHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 76 LSRLHIIEGDILQANLGIKDSD-LLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 76 ~~~~~~~~~D~~~~~~~~~~~~-~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
..++.++.+|++++.+|++..+ +..+++++|+|||+|+..++..++...+++|+.++.++++++....++++||++|
T Consensus 83 ~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS 160 (491)
T PLN02996 83 SEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS 160 (491)
T ss_pred hcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 2689999999999999998655 5677889999999999888777788899999999999999999865678999987
No 2
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.90 E-value=8.9e-23 Score=159.95 Aligned_cols=149 Identities=35% Similarity=0.573 Sum_probs=127.8
Q ss_pred cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccc-----cCC
Q psy11862 4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPA-----QLS 77 (152)
Q Consensus 4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~ 77 (152)
+.+.+++++|+|||||||+|+++++.|++.++++.+|+++.|.+...+..+++. ++.....+..++...+. ...
T Consensus 113 I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~ 192 (605)
T PLN02503 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS 192 (605)
T ss_pred hhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence 346778999999999999999999999998888899999999988888888885 66666666666554332 246
Q ss_pred cEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 78 RLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 78 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++..+.+|++++.+|++++....+.+.+|+|||+|+..++..++...+++|+.++.+++++|.....+++||++|
T Consensus 193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vS 267 (605)
T PLN02503 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVS 267 (605)
T ss_pred cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEcc
Confidence 899999999999999999888888889999999999988777888899999999999999999875678899987
No 3
>KOG1221|consensus
Probab=99.90 E-value=9e-23 Score=154.06 Aligned_cols=150 Identities=41% Similarity=0.727 Sum_probs=141.4
Q ss_pred ccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862 3 DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII 82 (152)
Q Consensus 3 ~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
++.+.+++++++|||||||+|+-+++.|++..+++.++|++.|.+.+.++.+++..+....+++.+.+..+....++..+
T Consensus 5 ~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi 84 (467)
T KOG1221|consen 5 DIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPI 84 (467)
T ss_pred cHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceec
Confidence 35677899999999999999999999999998899999999999999999999999998899999999988888999999
Q ss_pred EcccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 83 EGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 83 ~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.||++++++|+++.++..+.+.+|+|||+||...+.+.++....+|+.|+.+++++|+++.+.+.++++|
T Consensus 85 ~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVS 154 (467)
T KOG1221|consen 85 AGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVS 154 (467)
T ss_pred cccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEee
Confidence 9999999999999998988889999999999999999999999999999999999999987888999887
No 4
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.88 E-value=6.7e-23 Score=146.44 Aligned_cols=133 Identities=41% Similarity=0.587 Sum_probs=95.1
Q ss_pred EcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHh-cChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862 15 VTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS-KLPVFERLRKECPAQLSRLHIIEGDILQANLGI 93 (152)
Q Consensus 15 ItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 93 (152)
|||||||+|.+++.+|++.+..+ +|+|+.|.++.....+++.+.. ..+++..... ....+++++.+|++++.+|+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL 76 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGL 76 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG-
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCC
Confidence 79999999999999999997656 9999999877666777775443 3444333211 12479999999999999999
Q ss_pred ChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 94 KDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 94 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+++++..+.+.+|.|||+|+..++..+++++.+.|+.++.+++++|... ..++|+|+|
T Consensus 77 ~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iS 134 (249)
T PF07993_consen 77 SDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYIS 134 (249)
T ss_dssp -HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEE
T ss_pred ChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEec
Confidence 9999999999999999999999998899999999999999999999976 345999987
No 5
>KOG1502|consensus
Probab=99.86 E-value=9.4e-21 Score=137.48 Aligned_cols=122 Identities=22% Similarity=0.331 Sum_probs=100.6
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.+++|+||||+||||++|++.|+++|| .|...+|++....-.+-+.++. ....+...+..|+.+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY---~V~gtVR~~~~~k~~~~L~~l~-------------~a~~~l~l~~aDL~d 68 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY---TVRGTVRDPEDEKKTEHLRKLE-------------GAKERLKLFKADLLD 68 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC---EEEEEEcCcchhhhHHHHHhcc-------------cCcccceEEeccccc
Confidence 678999999999999999999999999 6889999876432222333332 223568999999999
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccchh--hHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEA--ELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++ .+...+.++|+|||.|....+.. +..++++..+.|+.+++++|++...++|+|++|
T Consensus 69 ~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TS 128 (327)
T KOG1502|consen 69 EG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTS 128 (327)
T ss_pred cc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEec
Confidence 77 69999999999999999877532 244799999999999999999986799999987
No 6
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.85 E-value=1.4e-20 Score=137.85 Aligned_cols=134 Identities=31% Similarity=0.389 Sum_probs=116.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
+++++||||||+|.+++++|+.+-. .+|+|++|.++.+...++++..... ...+.+....+++++.+|+..+.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~-----~~~~~e~~~~ri~vv~gDl~e~~ 73 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDL-----YRHWDELSADRVEVVAGDLAEPD 73 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhh-----hhhhhhhhcceEEEEeccccccc
Confidence 4799999999999999999999844 6999999988877777777665541 22233344689999999999999
Q ss_pred CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+|++..++..+.+.+|.|||+|+..++-.+++++...|+.|+..++++|... +.|.++|+|
T Consensus 74 lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVS 134 (382)
T COG3320 74 LGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVS 134 (382)
T ss_pred CCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEe
Confidence 9999999999999999999999999999999999999999999999999986 678899887
No 7
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.81 E-value=2.5e-19 Score=129.97 Aligned_cols=113 Identities=30% Similarity=0.329 Sum_probs=89.7
Q ss_pred EEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862 14 LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGI 93 (152)
Q Consensus 14 lItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 93 (152)
|||||+||+|++|+++|+++|+ +..|.++++....... ..+.. .....++.+|+++++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~-~~~~~-----------------~~~~~~~~~Di~d~~--- 58 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFL-KDLQK-----------------SGVKEYIQGDITDPE--- 58 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccc-hhhhc-----------------ccceeEEEeccccHH---
Confidence 6999999999999999999984 3477777776542210 01110 123348999999966
Q ss_pred ChhHHHHHhccccEEEeccccccch--hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 94 KDSDLLMLQEEVSVVFNGAASLKLE--AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 94 ~~~~~~~~~~~~d~vi~~a~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+.++++|+|||+|+..... .+.+.++++|+.|+.+++++|.+. ++++|||+|
T Consensus 59 ---~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytS 115 (280)
T PF01073_consen 59 ---SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTS 115 (280)
T ss_pred ---HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence 7999999999999999976643 467779999999999999999997 899999997
No 8
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.79 E-value=5.9e-19 Score=134.94 Aligned_cols=126 Identities=27% Similarity=0.387 Sum_probs=103.5
Q ss_pred cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862 4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHII 82 (152)
Q Consensus 4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
+...+++|+++||||+|.+|+++++++++.++ +++++++|++... .....+.+.. + ..++.++
T Consensus 244 i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~el~~~~------------~--~~~~~~~ 307 (588)
T COG1086 244 IGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKF------------P--ELKLRFY 307 (588)
T ss_pred HHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHHHHHhhC------------C--CcceEEE
Confidence 44567999999999999999999999999865 7999999976521 1122222211 1 3678899
Q ss_pred EcccCCCCCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 83 EGDILQANLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 83 ~~D~~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
-+|+.|.+ .+...+++ +|+|||.|+..+. +.++.+.+++|+.||.|++++|.+. ++++||++|
T Consensus 308 igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iS 375 (588)
T COG1086 308 IGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLIS 375 (588)
T ss_pred ecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEe
Confidence 99999965 68889986 9999999998875 7888999999999999999999998 899999987
No 9
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.77 E-value=8.1e-18 Score=125.55 Aligned_cols=126 Identities=26% Similarity=0.246 Sum_probs=93.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+||||++++++|++.|+ .|++++|..... ...+...... . ......++.++.+|+
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~---~V~~~d~~~~~~--~~~~~~~~~~-----~---~~~~~~~~~~~~~Di 78 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQ---TVIGLDNFSTGY--QHNLDDVRTS-----V---SEEQWSRFIFIQGDI 78 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCcc--hhhhhhhhhc-----c---ccccCCceEEEEccC
Confidence 35778999999999999999999999986 678888754321 1111111100 0 000124678899999
Q ss_pred CCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+.+ ++..+++++|+|||+|+.... ..+....+++|+.++.++++++.+. ++++|||+|
T Consensus 79 ~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~S 140 (348)
T PRK15181 79 RKFT------DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAA 140 (348)
T ss_pred CCHH------HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEee
Confidence 9854 688888899999999997553 2345568999999999999999987 788999986
No 10
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.77 E-value=1.1e-17 Score=124.29 Aligned_cols=127 Identities=20% Similarity=0.294 Sum_probs=91.9
Q ss_pred cccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862 2 GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHI 81 (152)
Q Consensus 2 ~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
.+.-. +.+++++||||+||||++++++|++.|+ +|+++.|+.........+..+ .. ..++.+
T Consensus 2 ~~~~~-~~~~~vlItG~~GfIG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~-------------~~-~~~~~~ 63 (338)
T PLN00198 2 ATLTP-TGKKTACVIGGTGFLASLLIKLLLQKGY---AVNTTVRDPENQKKIAHLRAL-------------QE-LGDLKI 63 (338)
T ss_pred CcccC-CCCCeEEEECCchHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHHHHHhc-------------CC-CCceEE
Confidence 34444 4578999999999999999999999987 566777764311000001110 00 135788
Q ss_pred EEcccCCCCCCCChhHHHHHhccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 82 IEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 82 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+.+|+++++ ++.+.++++|+|||+|+.... ......++++|+.++.++++++.+..++++||++|
T Consensus 64 ~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~S 130 (338)
T PLN00198 64 FGADLTDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTS 130 (338)
T ss_pred EEcCCCChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEee
Confidence 999999865 578888899999999996543 23334577999999999999998864578999886
No 11
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.77 E-value=1.8e-17 Score=122.14 Aligned_cols=122 Identities=20% Similarity=0.285 Sum_probs=90.6
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
++++++||||+||||++++++|+++|+ .|.+++|+.......+.+... .....++.++.+|+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~~ 66 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY---TVKATVRDPNDPKKTEHLLAL-------------DGAKERLHLFKANLLE 66 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC---EEEEEEcCCCchhhHHHHHhc-------------cCCCCceEEEeccccC
Confidence 468999999999999999999999997 667777764321111111100 0012468899999998
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+. .+..+++++|+|||+|+.... ..+...++++|+.++.++++++.+..++++||++|
T Consensus 67 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~S 126 (322)
T PLN02662 67 EG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTS 126 (322)
T ss_pred cc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEcc
Confidence 76 588888999999999986532 22223688999999999999998764678999987
No 12
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.76 E-value=2.6e-17 Score=121.48 Aligned_cols=122 Identities=19% Similarity=0.269 Sum_probs=91.6
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.+++++||||+|+||++++++|++.|+ .|++..|+.... +.+..+... .....++.++.+|+++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~Dl~~ 67 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY---TVKATVRDLTDR---KKTEHLLAL----------DGAKERLKLFKADLLE 67 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCCcch---HHHHHHHhc----------cCCCCceEEEecCCCC
Confidence 468999999999999999999999987 577777765421 112211110 0012468889999998
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++ .+.++++++|+|||+|+.... ..+...++++|+.++.++++++.+..++++||++|
T Consensus 68 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~S 127 (322)
T PLN02986 68 ES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTS 127 (322)
T ss_pred cc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence 76 588888899999999997532 23344578999999999999998754678999987
No 13
>PLN02214 cinnamoyl-CoA reductase
Probab=99.76 E-value=2.9e-17 Score=122.36 Aligned_cols=126 Identities=20% Similarity=0.230 Sum_probs=95.3
Q ss_pred CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|+.-....++++++||||+||||++++++|+++|+ .|.+++|+..... ...+..+. ....++.
T Consensus 1 ~~~~~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~-------------~~~~~~~ 63 (342)
T PLN02214 1 MPVDVASPAGKTVCVTGAGGYIASWIVKILLERGY---TVKGTVRNPDDPK-NTHLRELE-------------GGKERLI 63 (342)
T ss_pred CCcccccCCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCchhhh-HHHHHHhh-------------CCCCcEE
Confidence 34444456788999999999999999999999997 6777787643110 11111110 0123578
Q ss_pred EEEcccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+|++++. ++...++++|+|||+|+... .++...+++|+.++.++++++.+. ++++||++|
T Consensus 64 ~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~S 126 (342)
T PLN02214 64 LCKADLQDYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITS 126 (342)
T ss_pred EEecCcCChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEec
Confidence 8899999865 68888889999999999753 456778999999999999999987 688999986
No 14
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.75 E-value=1.5e-18 Score=124.89 Aligned_cols=120 Identities=29% Similarity=0.367 Sum_probs=81.8
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC--CcEEEEEcccCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL--SRLHIIEGDILQAN 90 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 90 (152)
||||||+|.||++++++|++.++ .++++++|++.. ...+.. +++...+... ..+..+.+|++|++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~---l~~l~~--------~l~~~~~~~~v~~~~~~vigDvrd~~ 67 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENK---LYELER--------ELRSRFPDPKVRFEIVPVIGDVRDKE 67 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHH---HHHHHH--------HCHHHC--TTCEEEEE--CTSCCHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhH---HHHHHH--------HHhhcccccCcccccCceeecccCHH
Confidence 79999999999999999999876 689999986431 111111 1111111101 12345688999865
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+..+++ ++|+|||.|+..+. +.++.+.+++|+.|+.+++++|.+. ++++||++|
T Consensus 68 ------~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~IS 127 (293)
T PF02719_consen 68 ------RLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFIS 127 (293)
T ss_dssp ------HHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEE
T ss_pred ------HHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEcc
Confidence 6888988 89999999998875 6778889999999999999999998 799999987
No 15
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.75 E-value=3.5e-17 Score=121.99 Aligned_cols=135 Identities=31% Similarity=0.408 Sum_probs=101.8
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+|+||||+|++|++++++|++.|+. .+|++++|+.......+++........ +... .....++.++.+|++++.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~---~~~~-~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYR---LWQE-DLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhC---CCCc-hhhhCCEEEEeCCcCcccC
Confidence 5899999999999999999999753 378999997653323333332211100 0000 0001478999999999998
Q ss_pred CCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 92 GIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++..+.+..+..++|+|||+|+..+...++..+.+.|+.++.++++++... +.++|+++|
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iS 135 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVS 135 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEc
Confidence 888888888888999999999988766677888899999999999999886 567798876
No 16
>PLN02650 dihydroflavonol-4-reductase
Probab=99.74 E-value=6.9e-17 Score=120.59 Aligned_cols=122 Identities=20% Similarity=0.290 Sum_probs=90.1
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
..++++||||+||||++++++|++.|+ +|++++|+.... +.+...... .....++.++.+|+++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~---~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~v~~Dl~d 67 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPANV---KKVKHLLDL----------PGATTRLTLWKADLAV 67 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCC---EEEEEEcCcchh---HHHHHHHhc----------cCCCCceEEEEecCCC
Confidence 357999999999999999999999987 677777764321 111111100 0011357889999998
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccch--hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE--AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+. .+..+++++|+|||+|+..... .+....+++|+.++.++++++.+.+.+++||++|
T Consensus 68 ~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~S 127 (351)
T PLN02650 68 EG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS 127 (351)
T ss_pred hh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 65 5788888999999999865432 2334688999999999999999864478999986
No 17
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.73 E-value=2.7e-17 Score=117.48 Aligned_cols=112 Identities=27% Similarity=0.364 Sum_probs=87.0
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+||||||.|+||++.+.+|++.|+ .|++++.-..+. .+.+.. ....++.+|+.|++
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~---~vvV~DNL~~g~--~~~v~~------------------~~~~f~~gDi~D~~ 57 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH---EVVVLDNLSNGH--KIALLK------------------LQFKFYEGDLLDRA 57 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC---eEEEEecCCCCC--HHHhhh------------------ccCceEEeccccHH
Confidence 5899999999999999999999998 455665433321 111111 11578999999976
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+.+.+. ++|+|||+||..... +.+-+.++.|+.++..|++++.+. ++++|||-|
T Consensus 58 ------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSS 117 (329)
T COG1087 58 ------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSS 117 (329)
T ss_pred ------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEec
Confidence 3777776 799999999977653 344558999999999999999998 799999976
No 18
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.73 E-value=1.3e-16 Score=117.90 Aligned_cols=121 Identities=19% Similarity=0.295 Sum_probs=90.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+||||++++++|++.|+ .|++++|+.... .+ ....... .....++.++.+|++++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~---~V~~~~r~~~~~--~~-~~~~~~~----------~~~~~~~~~~~~D~~d~ 68 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY---TINATVRDPKDR--KK-TDHLLAL----------DGAKERLKLFKADLLDE 68 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC---EEEEEEcCCcch--hh-HHHHHhc----------cCCCCceEEEeCCCCCc
Confidence 68999999999999999999999987 566677764321 11 1111000 00124688899999986
Q ss_pred CCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+ ++.++++++|+|||+||.... ..++...+++|+.++.++++++.+..+.++||++|
T Consensus 69 ~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~S 128 (325)
T PLN02989 69 G------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTS 128 (325)
T ss_pred h------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEec
Confidence 6 588888899999999996532 24466789999999999999998753567899876
No 19
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.73 E-value=1.1e-16 Score=118.44 Aligned_cols=120 Identities=25% Similarity=0.378 Sum_probs=91.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|.. ..|++++|+... .+.+.... . ..++.++.+|++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~-~~V~~~~r~~~~---~~~~~~~~------------~--~~~~~~v~~Dl~ 63 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELK---QWEMQQKF------------P--APCLRFFIGDVR 63 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEEEcCChhH---HHHHHHHh------------C--CCcEEEEEccCC
Confidence 46899999999999999999999998622 367777775321 11111110 0 146888999999
Q ss_pred CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
|++ ++.+.++++|+|||+||.... ..+....+++|+.++.++++++.+. ++++||++|
T Consensus 64 d~~------~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~S 124 (324)
T TIGR03589 64 DKE------RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALS 124 (324)
T ss_pred CHH------HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 854 688888899999999997542 3345568999999999999999987 678999886
No 20
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.72 E-value=1.9e-16 Score=121.56 Aligned_cols=127 Identities=18% Similarity=0.144 Sum_probs=88.4
Q ss_pred cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-C-------------HHHHHHHHhcChhhhhhh
Q psy11862 4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-T-------------PKARLAEFSKLPVFERLR 69 (152)
Q Consensus 4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~-------------~~~~~~~~~~~~~~~~~~ 69 (152)
....+++++++||||+||||++++++|++.|+ .|++++|..... . ..+.+..+..
T Consensus 41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------- 109 (442)
T PLN02572 41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGY---EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE-------- 109 (442)
T ss_pred CCccccCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeccccccccccccccccccccchHHHHHHHHH--------
Confidence 44567889999999999999999999999987 456655321100 0 0111111100
Q ss_pred hhccccCCcEEEEEcccCCCCCCCChhHHHHHhc--cccEEEeccccccch------hhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 70 KECPAQLSRLHIIEGDILQANLGIKDSDLLMLQE--EVSVVFNGAASLKLE------AELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 70 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~------~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
....++.++.+|++|++ .+.++++ ++|+|||+|+..... .++...+++|+.++.++++++..
T Consensus 110 ----~~~~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~ 179 (442)
T PLN02572 110 ----VSGKEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKE 179 (442)
T ss_pred ----hhCCcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 01246889999999854 5777776 589999999764321 22345678999999999999998
Q ss_pred cCCCc-ceEecC
Q psy11862 142 MKKLV-VSLDIG 152 (152)
Q Consensus 142 ~~~~~-~~v~~S 152 (152)
. +++ +||++|
T Consensus 180 ~-gv~~~~V~~S 190 (442)
T PLN02572 180 F-APDCHLVKLG 190 (442)
T ss_pred h-CCCccEEEEe
Confidence 7 564 898876
No 21
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.71 E-value=8e-17 Score=118.79 Aligned_cols=109 Identities=21% Similarity=0.242 Sum_probs=86.6
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+|+||||+|++|++++++|+++|+ .|.+++|+.... ..+. ..+++++.+|+.+++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~---~V~~l~R~~~~~---~~l~------------------~~~v~~v~~Dl~d~~ 56 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY---QVRCLVRNLRKA---SFLK------------------EWGAELVYGDLSLPE 56 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcChHHh---hhHh------------------hcCCEEEECCCCCHH
Confidence 4899999999999999999999997 678888864211 0000 136788999999865
Q ss_pred CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++...++++|+|||+++.. ..+.....++|+.++.+++++++.. ++++||++|
T Consensus 57 ------~l~~al~g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~S 109 (317)
T CHL00194 57 ------TLPPSFKGVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFS 109 (317)
T ss_pred ------HHHHHHCCCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEec
Confidence 6888999999999987643 2334457788999999999999997 789999987
No 22
>PLN02583 cinnamoyl-CoA reductase
Probab=99.71 E-value=3.5e-16 Score=114.47 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=90.5
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.+++++||||+|+||++++++|+++|+ .|+++.|+.......+.+..+. ....++.++.+|+++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~l~-------------~~~~~~~~~~~Dl~d 68 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGY---TVHAAVQKNGETEIEKEIRGLS-------------CEEERLKVFDVDPLD 68 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEEcCchhhhHHHHHHhcc-------------cCCCceEEEEecCCC
Confidence 357899999999999999999999997 6677777533222111122110 012468889999998
Q ss_pred CCCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++ ++...+.++|+|+|.++... ....+..++++|+.++.++++++.+..++++||++|
T Consensus 69 ~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~S 127 (297)
T PLN02583 69 YH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTS 127 (297)
T ss_pred HH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence 65 68888899999999876443 223456789999999999999998864578999986
No 23
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.70 E-value=2.7e-16 Score=125.85 Aligned_cols=122 Identities=28% Similarity=0.456 Sum_probs=94.4
Q ss_pred ceEEEcCCcchhHHHHHHHHHh--hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLR--SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~--~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
|+|+||||+|+||++++++|++ .|+ .|++++|+.. ...+..+... ....+++++.+|+++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~---~V~~l~R~~~----~~~~~~~~~~-----------~~~~~v~~~~~Dl~~ 62 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA---TVHVLVRRQS----LSRLEALAAY-----------WGADRVVPLVGDLTE 62 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC---EEEEEECcch----HHHHHHHHHh-----------cCCCcEEEEecccCC
Confidence 4799999999999999999994 554 7889998543 2222222110 001568899999999
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+..++..+.+..+ .++|+|||+||..+.........++|+.++.++++++.+. +.++||++|
T Consensus 63 ~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~S 124 (657)
T PRK07201 63 PGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVS 124 (657)
T ss_pred ccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEe
Confidence 8766666667666 8999999999987766666778899999999999999987 678999886
No 24
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.69 E-value=6.3e-16 Score=115.37 Aligned_cols=120 Identities=26% Similarity=0.267 Sum_probs=89.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+||||+++++.|++.|+ .|++++|+.... .+....+.. ..++.++.+|++
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~--~~~~~~~~~--------------~~~~~~~~~Dl~ 62 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGA---EVYGYSLDPPTS--PNLFELLNL--------------AKKIEDHFGDIR 62 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCC---EEEEEeCCCccc--hhHHHHHhh--------------cCCceEEEccCC
Confidence 4679999999999999999999999987 677788765421 111111100 135677899998
Q ss_pred CCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+++ ++.++++ ++|+|||+||.... ..++...+++|+.++.++++++...+..++||++|
T Consensus 63 ~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~S 126 (349)
T TIGR02622 63 DAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVT 126 (349)
T ss_pred CHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 854 5777776 46999999996432 34566788999999999999998763367899876
No 25
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.69 E-value=8.3e-16 Score=109.53 Aligned_cols=123 Identities=21% Similarity=0.264 Sum_probs=89.9
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+++||.++++.|+++|+ .+++++|+.+ .+.+..+++.. .....+.++++|+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~---~liLvaR~~~--kL~~la~~l~~------------~~~v~v~vi~~DL 65 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY---NLILVARRED--KLEALAKELED------------KTGVEVEVIPADL 65 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCcHH--HHHHHHHHHHH------------hhCceEEEEECcC
Confidence 36789999999999999999999999997 7789998743 22222122211 1236788999999
Q ss_pred CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
++++ ++.++.. .+|++|||||+..+ .+...+++++|+.+...|.++..+. ++-+++|
T Consensus 66 s~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~Ii 139 (265)
T COG0300 66 SDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHII 139 (265)
T ss_pred CChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 9976 3444332 68999999997653 4556669999999999998887642 2446777
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
.++
T Consensus 140 NI~ 142 (265)
T COG0300 140 NIG 142 (265)
T ss_pred EEe
Confidence 764
No 26
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=6.5e-16 Score=110.17 Aligned_cols=120 Identities=26% Similarity=0.288 Sum_probs=93.1
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|++|||||.||||++.++.+++..+. ..|++++.-.-..+ .+.+..+.. .+++.++.+|+.|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn-~~~l~~~~~--------------~~~~~fv~~DI~D~~ 64 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGN-LENLADVED--------------SPRYRFVQGDICDRE 64 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCC-HHHHHhhhc--------------CCCceEEeccccCHH
Confidence 57999999999999999999998655 45777765433222 233333322 368999999999966
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+.++++ .+|+|+|.|+.++. -..+..++++|+.||.+|++++++....-||+++|
T Consensus 65 ------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HIS 125 (340)
T COG1088 65 ------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIS 125 (340)
T ss_pred ------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEec
Confidence 5888887 69999999999875 35567799999999999999999984335899887
No 27
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.68 E-value=7.7e-16 Score=115.06 Aligned_cols=119 Identities=23% Similarity=0.303 Sum_probs=86.4
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.+++++||||+||||++++++|+++|+ .|++++|+.. ........+ . ...++.++.+|+++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~---~V~~~~r~~~--~~~~~~~~~-------------~-~~~~~~~~~~Dl~~ 69 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY---TVHATLRDPA--KSLHLLSKW-------------K-EGDRLRLFRADLQE 69 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHhh-------------c-cCCeEEEEECCCCC
Confidence 467999999999999999999999987 6677777532 111111111 0 02468889999998
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccch-----hhHH-----HHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE-----AELK-----ENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~-----~~~~-----~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++ ++.++++++|+|||+|+..... .+.. .+++.|+.++.++++++.+..++++||++|
T Consensus 70 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~S 137 (353)
T PLN02896 70 EG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTS 137 (353)
T ss_pred HH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEe
Confidence 54 6888888999999999975421 1232 245566799999999998864478999876
No 28
>PLN02427 UDP-apiose/xylose synthase
Probab=99.68 E-value=8e-16 Score=116.25 Aligned_cols=119 Identities=16% Similarity=0.130 Sum_probs=86.6
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+.|+|+||||+||||++++++|++. |+ .|++++|+... ...+.... ......+++++.+|+.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~---~V~~l~r~~~~------~~~l~~~~--------~~~~~~~~~~~~~Dl~ 75 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH---KVLALDVYNDK------IKHLLEPD--------TVPWSGRIQFHRINIK 75 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC---EEEEEecCchh------hhhhhccc--------cccCCCCeEEEEcCCC
Confidence 4578999999999999999999998 45 67778775321 11111000 0011246889999999
Q ss_pred CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++. .+.++++++|+|||+|+.... ..+..+.+..|+.++.+++++|.+. + ++||++|
T Consensus 76 d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~S 135 (386)
T PLN02427 76 HDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFS 135 (386)
T ss_pred ChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEe
Confidence 865 688888899999999996542 2233456678999999999999876 4 7899887
No 29
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.68 E-value=1e-15 Score=114.15 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=85.0
Q ss_pred CceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
+|+|+||||+||||++++++|++. |+ .|++++|+.. ....+.. ...+.++.+|+.+
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~---~V~~~~r~~~------~~~~~~~--------------~~~~~~~~~Dl~~ 57 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW---EVYGMDMQTD------RLGDLVN--------------HPRMHFFEGDITI 57 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC---eEEEEeCcHH------HHHHhcc--------------CCCeEEEeCCCCC
Confidence 368999999999999999999986 55 6778877432 1111111 1468889999974
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+. +.+.++++++|+|||+|+.... ..++...+++|+.++.+++++|.+. + ++||++|
T Consensus 58 ~~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~S 117 (347)
T PRK11908 58 NK-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPS 117 (347)
T ss_pred CH-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEe
Confidence 21 2466777899999999997543 3455668899999999999999986 4 6999886
No 30
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.67 E-value=1.1e-15 Score=113.73 Aligned_cols=123 Identities=23% Similarity=0.256 Sum_probs=86.5
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++||||+||||++++++|++.|+ .|++++|+..... .+.+..+... . ......++.++.+|++|++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~~~-----~---~~~~~~~~~~~~~Dl~d~~ 68 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY---EVHGLIRRSSSFN-TQRIEHIYED-----P---HNVNKARMKLHYGDLTDSS 68 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC---EEEEEecCCcccc-hhhhhhhhhc-----c---ccccccceeEEEeccCCHH
Confidence 5899999999999999999999987 6788888653210 1122211100 0 0001246889999999854
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCC---cceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKL---VVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~S 152 (152)
++.++++ ++|+|||+|+..... ......+++|+.++.+++++|.+. ++ .+||++|
T Consensus 69 ------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~S 131 (343)
T TIGR01472 69 ------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQAS 131 (343)
T ss_pred ------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEec
Confidence 5777777 469999999975532 233456788999999999999886 33 3788876
No 31
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.67 E-value=1.3e-15 Score=113.76 Aligned_cols=120 Identities=24% Similarity=0.285 Sum_probs=84.8
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+||||+++++.|+++|+. .+++..|....... ..+.... ...++.++.+|++++
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~--~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~d~ 63 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSD--AVVVVDKLTYAGNL-MSLAPVA--------------QSERFAFEKVDICDR 63 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCC--EEEEEecCccccch-hhhhhcc--------------cCCceEEEECCCcCh
Confidence 368999999999999999999999874 24444443221111 1111100 013577889999986
Q ss_pred CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhc--------CCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKM--------KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~S 152 (152)
+ ++.++++ ++|+|||+||.... ...+..++++|+.++.++++++.+. .++++||++|
T Consensus 64 ~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~S 133 (355)
T PRK10217 64 A------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIS 133 (355)
T ss_pred H------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEec
Confidence 5 6777777 48999999997653 2345779999999999999999762 2456888876
No 32
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.67 E-value=1.8e-15 Score=117.73 Aligned_cols=131 Identities=18% Similarity=0.173 Sum_probs=93.3
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+.+++++++||||+|+||++++++|++.|+ .|++++|+.. .+......+.... +.........++.++.+|
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~---~Vval~Rn~e--kl~~l~~~l~~~~----L~~~Ga~~~~~v~iV~gD 146 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSAQ--RAESLVQSVKQMK----LDVEGTQPVEKLEIVECD 146 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHhhhhc----cccccccccCceEEEEec
Confidence 456789999999999999999999999987 6777888643 1111111111000 000000012358899999
Q ss_pred cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+.+.+ ++...++++|+|||++|.... ..++...+.+|+.++.++++++... ++++||++|
T Consensus 147 LtD~e------sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VS 207 (576)
T PLN03209 147 LEKPD------QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVT 207 (576)
T ss_pred CCCHH------HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEc
Confidence 98854 688888999999999986532 1245567889999999999999987 688999986
No 33
>KOG1371|consensus
Probab=99.67 E-value=5e-16 Score=111.93 Aligned_cols=121 Identities=23% Similarity=0.241 Sum_probs=94.4
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
.++||||||+||||+|.+.+|++.|++|..|.-++|+-. ....+++.+... ...+.++.+|++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~--~sl~r~~~l~~~-------------~~~v~f~~~Dl~D~ 66 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYL--ESLKRVRQLLGE-------------GKSVFFVEGDLNDA 66 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccch--hHHHHHHHhcCC-------------CCceEEEEeccCCH
Confidence 578999999999999999999999997766665555432 223333333211 47899999999996
Q ss_pred CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+ .++++|+ +.|.|+|.|+.... .+++...++.|+.++.++++.+++. +++++|+.|
T Consensus 67 ~------~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~ss 127 (343)
T KOG1371|consen 67 E------ALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSS 127 (343)
T ss_pred H------HHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEec
Confidence 6 5888887 68999999997664 2334558899999999999999998 589999876
No 34
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.66 E-value=2.2e-15 Score=105.12 Aligned_cols=125 Identities=16% Similarity=0.151 Sum_probs=91.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.++|.++||||++|||.++++.|.+.|+ +|++..|+. ++|+++... .. ...+..+..|++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR~------drL~~la~~---------~~--~~~~~~~~~DVt 63 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGA---KVVLAARRE------ERLEALADE---------IG--AGAALALALDVT 63 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEeccH------HHHHHHHHh---------hc--cCceEEEeeccC
Confidence 4568999999999999999999999997 889999863 344433221 01 046888999999
Q ss_pred CCCCCCC-hhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 88 QANLGIK-DSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
|++.-.. .+.+...+.++|++|||||... ..++|+.++++|+.+..+..++..+. ++..++|++|
T Consensus 64 D~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~ 139 (246)
T COG4221 64 DRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLG 139 (246)
T ss_pred CHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEec
Confidence 9751000 1223344457999999999754 26789999999999999999998652 2445777765
No 35
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.66 E-value=2e-15 Score=121.19 Aligned_cols=123 Identities=22% Similarity=0.351 Sum_probs=89.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.+.|+|+||||+||||++++++|++.|+++ +|++++|.....+. ..+... ....++.++.+|++
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~~-~~l~~~--------------~~~~~v~~~~~Dl~ 67 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSNL-KNLNPS--------------KSSPNFKFVKGDIA 67 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccchh-hhhhhc--------------ccCCCeEEEECCCC
Confidence 467899999999999999999999985543 67778764321111 111100 01246889999999
Q ss_pred CCCCCCChhHHHHHh--ccccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ--EEVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~--~~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+++ .+...+ .++|+|||+|+..... .+....+++|+.++.++++++...+.+++||++|
T Consensus 68 d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~S 131 (668)
T PLN02260 68 SAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
T ss_pred ChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence 864 355444 5799999999986542 2345678999999999999999874478999987
No 36
>PLN02686 cinnamoyl-CoA reductase
Probab=99.66 E-value=9.4e-16 Score=115.25 Aligned_cols=127 Identities=17% Similarity=0.254 Sum_probs=90.5
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+||||++++++|++.|+ .|+++.|+.. . .+.+..+.... ........+.++.+|+
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~---~V~~~~r~~~--~-~~~l~~l~~~~-------~~~~~~~~~~~v~~Dl 116 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY---SVRIAVDTQE--D-KEKLREMEMFG-------EMGRSNDGIWTVMANL 116 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHhhhc-------cccccCCceEEEEcCC
Confidence 46789999999999999999999999997 5666666432 1 11222111000 0000013578889999
Q ss_pred CCCCCCCChhHHHHHhccccEEEeccccccchh---hHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKLEA---ELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++++ ++.++++++|++||+++..+... ......+.|+.++.++++++.+..++++||++|
T Consensus 117 ~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~S 179 (367)
T PLN02686 117 TEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTS 179 (367)
T ss_pred CCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEec
Confidence 9865 68888889999999998764322 224567889999999999998854688999987
No 37
>KOG1205|consensus
Probab=99.65 E-value=8.7e-16 Score=110.23 Aligned_cols=130 Identities=23% Similarity=0.258 Sum_probs=90.5
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+.+.+|+++||||++|||.+++.+|++.|. +++.+.|+.. ..+++ +++.+. .+ ..++.++++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~---~l~lvar~~r---rl~~v~~~l~~~---------~~--~~~v~~~~~ 70 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGA---KLVLVARRAR---RLERVAEELRKL---------GS--LEKVLVLQL 70 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCC---ceEEeehhhh---hHHHHHHHHHHh---------CC--cCccEEEeC
Confidence 346889999999999999999999999985 5566665432 12333 222221 11 125999999
Q ss_pred ccCCCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 85 DILQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 85 D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
|++|.+.... .++..+.+.++|++|||||+... ..+.+.++++|+.|+..+.+++.+. .+-+|+|.+|
T Consensus 71 Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvis 149 (282)
T KOG1205|consen 71 DVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVIS 149 (282)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEe
Confidence 9999652110 11223455689999999998652 4566779999999999999998753 2346888765
No 38
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.65 E-value=3.1e-15 Score=106.94 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=88.0
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||++++++|++.|+ +|++.+|+.. ...+....+.. .+.++.++.+|+
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~i~~-------------~~~~~~~~~~D~ 68 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGA---EVILNGRDPA--KLAAAAESLKG-------------QGLSAHALAFDV 68 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCceEEEEEccC
Confidence 36789999999999999999999999987 6777887532 11111111111 124578889999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
++++ ++..++ .++|++||++|... ..+.++..+++|+.++.++++++.+. .+.+++|
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (255)
T PRK07523 69 TDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKII 142 (255)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEE
Confidence 9865 444444 35899999999753 24556778999999999999988753 2356888
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 143 ~is 145 (255)
T PRK07523 143 NIA 145 (255)
T ss_pred EEc
Confidence 875
No 39
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.65 E-value=2.2e-15 Score=113.37 Aligned_cols=113 Identities=16% Similarity=0.079 Sum_probs=85.2
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
++|+|+||||+|+||+++++.|.+.|+ .|.+++|..... . . .......++.+|+++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~---~V~~v~r~~~~~-~----~----------------~~~~~~~~~~~Dl~d 75 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGH---YIIASDWKKNEH-M----S----------------EDMFCHEFHLVDLRV 75 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCC---EEEEEEeccccc-c----c----------------cccccceEEECCCCC
Confidence 568999999999999999999999987 677788753210 0 0 001124677899987
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.. .+...+.++|+|||+|+.... ..+....+..|+.++.++++++.+. ++++|||+|
T Consensus 76 ~~------~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~S 136 (370)
T PLN02695 76 ME------NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYAS 136 (370)
T ss_pred HH------HHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence 43 577777889999999986531 2234456788999999999999987 688999986
No 40
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.65 E-value=2.5e-15 Score=111.74 Aligned_cols=125 Identities=22% Similarity=0.191 Sum_probs=88.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.++++++||||+||||++++++|++.|+ .|++++|+..... .+.+..+.. .......++.++.+|++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~Dl~ 70 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGY---EVHGIIRRSSNFN-TQRLDHIYI---------DPHPNKARMKLHYGDLS 70 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEEeccccccc-ccchhhhcc---------ccccccCceEEEEecCC
Confidence 4578999999999999999999999987 6777877643110 111111110 00001246889999999
Q ss_pred CCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCc-----ceEecC
Q psy11862 88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLV-----VSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~S 152 (152)
+.+ ++..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. +++ +||++|
T Consensus 71 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~S 138 (340)
T PLN02653 71 DAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAG 138 (340)
T ss_pred CHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEec
Confidence 855 5777766 47999999997543 2345567799999999999999886 443 788875
No 41
>PLN02240 UDP-glucose 4-epimerase
Probab=99.65 E-value=4.1e-15 Score=110.90 Aligned_cols=123 Identities=22% Similarity=0.207 Sum_probs=89.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
|++++++||||+|++|.+++++|++.|+ .|++++|..... ...+++..... ....++.++.+|+
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D~ 67 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGY---KVVVIDNLDNSSEEALRRVKELAG------------DLGDNLVFHKVDL 67 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCcchHHHHHHHHHhhc------------ccCccceEEecCc
Confidence 5678999999999999999999999986 667777653211 11111111100 0124578889999
Q ss_pred CCCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 87 LQANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+++. ++..+++ ++|+|||+|+.... ...+...++.|+.++.++++++.+. ++++||++|
T Consensus 68 ~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S 131 (352)
T PLN02240 68 RDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSS 131 (352)
T ss_pred CCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence 8854 5777665 68999999986532 3456678999999999999999886 678999886
No 42
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.65 E-value=3.7e-15 Score=106.73 Aligned_cols=122 Identities=20% Similarity=0.161 Sum_probs=83.8
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||.++++.|+++|+ .|++++|++. ...+....+.. ...++.++.+|+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl 65 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGA---AVAIADLNQD--GANAVADEINK-------------AGGKAIGVAMDV 65 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCChH--HHHHHHHHHHh-------------cCceEEEEECCC
Confidence 36789999999999999999999999987 5677787643 12222222211 124677889999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH----hcCCCcce
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL----KMKKLVVS 148 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~ 148 (152)
+++. ++..++ .++|++||++|.... .+.++..+++|+.++..+.+.+. +..+.+++
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~i 139 (262)
T PRK13394 66 TNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVV 139 (262)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEE
Confidence 9865 344333 358999999997532 34566788899999665554442 22256788
Q ss_pred EecC
Q psy11862 149 LDIG 152 (152)
Q Consensus 149 v~~S 152 (152)
|++|
T Consensus 140 v~~s 143 (262)
T PRK13394 140 IYMG 143 (262)
T ss_pred EEEc
Confidence 8876
No 43
>PRK06194 hypothetical protein; Provisional
Probab=99.65 E-value=4.9e-15 Score=107.61 Aligned_cols=121 Identities=16% Similarity=0.114 Sum_probs=85.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ +|++++|+.. ...+...++.. ...++.++.+|++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~ 65 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGM---KLVLADVQQD--ALDRAVAELRA-------------QGAEVLGVRTDVS 65 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence 5678999999999999999999999986 6777787532 22222222211 1246788999999
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh----cCC-----
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK----MKK----- 144 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~----~~~----- 144 (152)
+++ ++.++++ ++|++||+||.... .+.+...+++|+.++.++++++.+ ...
T Consensus 66 d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~ 139 (287)
T PRK06194 66 DAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAY 139 (287)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 865 4555443 57999999997542 356677899999999998888643 211
Q ss_pred CcceEecC
Q psy11862 145 LVVSLDIG 152 (152)
Q Consensus 145 ~~~~v~~S 152 (152)
.+++|++|
T Consensus 140 ~g~iv~~s 147 (287)
T PRK06194 140 EGHIVNTA 147 (287)
T ss_pred CeEEEEeC
Confidence 14788765
No 44
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5.7e-15 Score=105.87 Aligned_cols=125 Identities=16% Similarity=0.154 Sum_probs=89.0
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
..+++++++||||+|+||.++++.|+++|+ +|++++|+.. ...+....+... ....++.++.+|
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~---~vv~~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~D 66 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFAREGA---AVALADLDAA--LAERAAAAIARD-----------VAGARVLAVPAD 66 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc-----------cCCceEEEEEcc
Confidence 347789999999999999999999999986 6778887533 222222222110 012467889999
Q ss_pred cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862 86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS 148 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~ 148 (152)
+++++ ++..++ .++|++||+||... ..+.+...+++|+.++..+++++.+. .+.+++
T Consensus 67 l~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i 140 (260)
T PRK07063 67 VTDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSI 140 (260)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEE
Confidence 99865 344333 47899999999643 14567788999999999999987642 234678
Q ss_pred EecC
Q psy11862 149 LDIG 152 (152)
Q Consensus 149 v~~S 152 (152)
|++|
T Consensus 141 v~is 144 (260)
T PRK07063 141 VNIA 144 (260)
T ss_pred EEEC
Confidence 8875
No 45
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.64 E-value=4.1e-15 Score=114.11 Aligned_cols=112 Identities=22% Similarity=0.325 Sum_probs=82.3
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
++|+|+||||+||||++++++|+++|+ .|++++|.... ..+.+.... ...++.++.+|+.+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~---~V~~ld~~~~~--~~~~~~~~~--------------~~~~~~~i~~D~~~ 178 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD---SVIVVDNFFTG--RKENVMHHF--------------SNPNFELIRHDVVE 178 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC---EEEEEeCCCcc--chhhhhhhc--------------cCCceEEEECCccC
Confidence 568999999999999999999999987 56777764321 111111110 02467788888876
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+. +.++|+|||+|+.... ..+....+++|+.++.+++++|++. +. +||++|
T Consensus 179 ~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~S 232 (442)
T PLN02206 179 PI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTS 232 (442)
T ss_pred hh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEEC
Confidence 42 2468999999986542 2356678899999999999999987 44 899886
No 46
>PRK06398 aldose dehydrogenase; Validated
Probab=99.64 E-value=5.6e-15 Score=105.98 Aligned_cols=110 Identities=15% Similarity=0.225 Sum_probs=84.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ +|++++|+... ...+.++.+|++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~---~Vi~~~r~~~~--------------------------~~~~~~~~~D~~ 54 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS---NVINFDIKEPS--------------------------YNDVDYFKVDVS 54 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCccc--------------------------cCceEEEEccCC
Confidence 6789999999999999999999999997 67788875431 135778899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||+||... ..+++...+++|+.++..+++++.+. .+.+++|+
T Consensus 55 ~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 128 (258)
T PRK06398 55 NKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIIN 128 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 865 343333 46899999999643 24567778999999999998888642 24468888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 129 is 130 (258)
T PRK06398 129 IA 130 (258)
T ss_pred eC
Confidence 75
No 47
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.64 E-value=2.6e-15 Score=120.36 Aligned_cols=116 Identities=22% Similarity=0.231 Sum_probs=87.8
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
.-++|+|+||||+||||++++++|++. |+ .|++++|..... ..... ..++.++.+|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~---~V~~l~r~~~~~------~~~~~--------------~~~~~~~~gD 368 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY---EVYGLDIGSDAI------SRFLG--------------HPRFHFVEGD 368 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCc---EEEEEeCCchhh------hhhcC--------------CCceEEEecc
Confidence 346789999999999999999999985 56 678888754210 00000 1468889999
Q ss_pred cCCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++++. ..+.++++++|+|||+||.... ..+....+++|+.++.+++++|.+. + ++|||+|
T Consensus 369 l~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~S 431 (660)
T PRK08125 369 ISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPS 431 (660)
T ss_pred ccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEc
Confidence 98853 1246677899999999997653 3345568899999999999999987 4 7899887
No 48
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.63 E-value=8.3e-15 Score=105.45 Aligned_cols=122 Identities=16% Similarity=0.109 Sum_probs=87.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ +|++.+|+.. .+.+..+++.. ....++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dv~ 68 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGA---DVILLSRNEE--NLKKAREKIKS------------ESNVDVSYIVADLT 68 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh------------hcCCceEEEEecCC
Confidence 6789999999999999999999999997 6777787532 11111111111 01246888999999
Q ss_pred CCCCCCChhHHHHHh------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 88 QANLGIKDSDLLMLQ------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+++ ++.+++ .++|++||++|... ..+.|+..+++|+.++..+.+++.+. .+.+++|++
T Consensus 69 ~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~i 142 (263)
T PRK08339 69 KRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYS 142 (263)
T ss_pred CHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 865 344433 36899999998643 14678889999999998888777542 234678887
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 143 s 143 (263)
T PRK08339 143 T 143 (263)
T ss_pred c
Confidence 5
No 49
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7.2e-15 Score=106.42 Aligned_cols=117 Identities=18% Similarity=0.182 Sum_probs=85.4
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.+++++||||+|+||++++++|++.|+ +|++++|+.. .+..+.. ....++.++.+|+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~l~~------------~~~~~~~~~~~D~~d 61 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSEA------ARADFEA------------LHPDRALARLLDVTD 61 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC---EEEEEeCCHH------HHHHHHh------------hcCCCeeEEEccCCC
Confidence 468899999999999999999999986 6788888542 1221111 012467888999998
Q ss_pred CCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEec
Q psy11862 89 ANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDI 151 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~ 151 (152)
++ ++.+.++ ++|++||+||.... .+.++..+++|+.++.++++++.+ ..+.+++|++
T Consensus 62 ~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 135 (277)
T PRK06180 62 FD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI 135 (277)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 65 3444433 68999999997542 355677899999999999998754 2245678887
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 136 S 136 (277)
T PRK06180 136 T 136 (277)
T ss_pred e
Confidence 5
No 50
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.62 E-value=3.9e-15 Score=112.73 Aligned_cols=120 Identities=24% Similarity=0.305 Sum_probs=87.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.++++++||||+|+||++++++|+++|+ .|++++|+.............. ....++.++.+|++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~-------------~~~~~v~~v~~Dl~ 121 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY---NVVAVAREKSGIRGKNGKEDTK-------------KELPGAEVVFGDVT 121 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEEechhhccccchhhHHh-------------hhcCCceEEEeeCC
Confidence 4678999999999999999999999987 6788888654211000000000 01246889999999
Q ss_pred CCCCCCChhHHHHHhc----cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQE----EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
|++ ++.+.++ ++|+||||++.... ...+.+++|+.++.++++++.+. ++++||++|
T Consensus 122 d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iS 181 (390)
T PLN02657 122 DAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLS 181 (390)
T ss_pred CHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 965 5777776 58999999875321 12345678999999999999987 688999986
No 51
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.62 E-value=7.5e-15 Score=107.75 Aligned_cols=123 Identities=16% Similarity=0.159 Sum_probs=84.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|+++|+ +|++++|+.. ...+...++.. . ....++.++.+|++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~---~vi~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dl~ 77 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNLD--KGKAAAARITA---------A--TPGADVTLQELDLT 77 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH---------h--CCCCceEEEECCCC
Confidence 6789999999999999999999999986 6778887532 11221222111 0 01246788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+.+ ++.+++ .++|++|||||.... .+.+...+++|+.++..+.+.+.+. .+.+++|++|
T Consensus 78 d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vS 151 (306)
T PRK06197 78 SLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVS 151 (306)
T ss_pred CHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 865 344433 368999999996532 3456678899999977766665432 1346888876
No 52
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.62 E-value=8.9e-15 Score=104.80 Aligned_cols=123 Identities=14% Similarity=0.133 Sum_probs=85.4
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
...+++++++||||+|+||++++++|+++|+ +|++++|+.. ..+...++.. ...++.++.+
T Consensus 3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~---~v~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~ 63 (260)
T PRK12823 3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGA---RVVLVDRSEL---VHEVAAELRA-------------AGGEALALTA 63 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCchH---HHHHHHHHHh-------------cCCeEEEEEE
Confidence 3457889999999999999999999999986 6777787532 1111122111 1246778899
Q ss_pred ccCCCCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCc
Q psy11862 85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLV 146 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~ 146 (152)
|+++++ ++.++ +.++|++|||||... ....+...+++|+.++..+++.+.+. .+.+
T Consensus 64 D~~~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g 137 (260)
T PRK12823 64 DLETYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG 137 (260)
T ss_pred eCCCHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 999854 33333 346899999998531 14556778899999998877766531 2446
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
++|++|
T Consensus 138 ~iv~~s 143 (260)
T PRK12823 138 AIVNVS 143 (260)
T ss_pred eEEEEc
Confidence 788876
No 53
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.62 E-value=1.3e-14 Score=111.28 Aligned_cols=112 Identities=23% Similarity=0.330 Sum_probs=82.0
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
+.|+|+||||+||||++++++|++.|+ .|++++|..... .+.+..... ..++.++.+|+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~---~V~~ldr~~~~~--~~~~~~~~~--------------~~~~~~~~~Di~~ 179 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGD---EVIVIDNFFTGR--KENLVHLFG--------------NPRFELIRHDVVE 179 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCcc--HhHhhhhcc--------------CCceEEEECcccc
Confidence 457999999999999999999999987 667777753211 111111100 1357788888866
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+. +.++|+|||+|+.... ..+....++.|+.++.+++++|.+. +. +||++|
T Consensus 180 ~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~S 233 (436)
T PLN02166 180 PI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTS 233 (436)
T ss_pred cc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEEC
Confidence 42 2478999999986542 2456678999999999999999987 44 798886
No 54
>PRK06128 oxidoreductase; Provisional
Probab=99.62 E-value=1.4e-14 Score=106.04 Aligned_cols=123 Identities=13% Similarity=0.135 Sum_probs=85.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|++.|+ .|++..++.......+....+.. ...++.++.+|++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~i~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 116 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGA---DIALNYLPEEEQDAAEVVQLIQA-------------EGRKAVALPGDLK 116 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCC---EEEEEeCCcchHHHHHHHHHHHH-------------cCCeEEEEecCCC
Confidence 6679999999999999999999999987 45555544322122221111111 1346788999999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~ 151 (152)
+++ ++.++ +.++|++|||||... ..+.+...+++|+.++.++++++.+. ..-.++|++
T Consensus 117 ~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~ 190 (300)
T PRK06128 117 DEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINT 190 (300)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEE
Confidence 864 34333 347899999999642 14567889999999999999999763 122478876
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 191 s 191 (300)
T PRK06128 191 G 191 (300)
T ss_pred C
Confidence 5
No 55
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.1e-14 Score=105.44 Aligned_cols=121 Identities=16% Similarity=0.181 Sum_probs=86.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|++.|+ +|++.+|+.. .+.+...++.. ...++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~---~Vv~~~r~~~--~l~~~~~~l~~-------------~~~~~~~~~~Dv~ 65 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGA---RVVLGDVDKP--GLRQAVNHLRA-------------EGFDVHGVMCDVR 65 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEeCCCC
Confidence 6789999999999999999999999986 5677777532 22222222211 1246778899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v 149 (152)
+++ ++.+++ .++|++||+||... ..+.++..+++|+.++.++++++.+ .+..+++|
T Consensus 66 d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv 139 (275)
T PRK05876 66 HRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVV 139 (275)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 865 444443 36899999999643 1456777899999999999998863 21245788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 140 ~is 142 (275)
T PRK05876 140 FTA 142 (275)
T ss_pred EeC
Confidence 775
No 56
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.62 E-value=1.5e-14 Score=103.32 Aligned_cols=121 Identities=16% Similarity=0.200 Sum_probs=86.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ .|++.+|+.. ...+...++.. ...++..+.+|++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~---~vvl~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~ 68 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA---EIIINDITAE--RAELAVAKLRQ-------------EGIKAHAAPFNVT 68 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCeEEEEecCCC
Confidence 6789999999999999999999999986 6777777532 11222222111 1245778899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++..++ .++|++||++|... ..+.++..+++|+.++..+++++.+. .+.+++|+
T Consensus 69 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK08085 69 HKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIIN 142 (254)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 344433 36899999999643 24667789999999999998887652 23467887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 143 is 144 (254)
T PRK08085 143 IC 144 (254)
T ss_pred Ec
Confidence 75
No 57
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.61 E-value=1.5e-14 Score=107.35 Aligned_cols=118 Identities=23% Similarity=0.230 Sum_probs=84.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|+||++++++|++.|+ .|++++|..... ...+..+.. . ...++.++.+|+++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~--~~~~~~~~~---------~---~~~~~~~~~~Dl~d~~ 63 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVVILDNLCNSK--RSVLPVIER---------L---GGKHPTFVEGDIRNEA 63 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC---eEEEEecCCCch--HhHHHHHHH---------h---cCCCceEEEccCCCHH
Confidence 4799999999999999999999987 556666542211 111111100 0 0134677889998854
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+.+++. ++|+|||+|+.... .....+.+++|+.++.++++++.+. ++++||++|
T Consensus 64 ------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S 123 (338)
T PRK10675 64 ------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSS 123 (338)
T ss_pred ------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence 5666665 68999999987542 2345568899999999999999987 678999876
No 58
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.61 E-value=1.5e-14 Score=102.75 Aligned_cols=121 Identities=17% Similarity=0.145 Sum_probs=87.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|++|.+++++|+++|+ +|++++|+.. ...+....+... ...+.++.+|++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~~-------------~~~~~~~~~Dl~ 65 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGA---EVIVVDICGD--DAAATAELVEAA-------------GGKARARQVDVR 65 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc-------------CCeEEEEECCCC
Confidence 4678999999999999999999999986 6788888643 222222222111 245888999998
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~ 150 (152)
+++ ++.+.++ ++|++||++|.... .+++...++.|+.++.++++++.+ ..+.++||+
T Consensus 66 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 139 (251)
T PRK12826 66 DRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVL 139 (251)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 854 4555443 68999999987542 456677899999999999988753 124567887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 140 ~s 141 (251)
T PRK12826 140 TS 141 (251)
T ss_pred Ee
Confidence 65
No 59
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.6e-14 Score=103.82 Aligned_cols=121 Identities=15% Similarity=0.187 Sum_probs=86.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.++++.|+++|+ +|++++|+.. ...+....+.. ...++.++.+|++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~---~Vi~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~ 69 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTES--QLDEVAEQIRA-------------AGRRAHVVAADLA 69 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence 6789999999999999999999999986 6788888532 11111111111 1246788899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v 149 (152)
+++ ++.+++ .++|++||+||... ..+.+...+++|+.++.++.+++.+. .+.+++|
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv 143 (263)
T PRK07814 70 HPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVI 143 (263)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 854 344333 47899999998532 13567778999999999999998642 2446788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 144 ~~s 146 (263)
T PRK07814 144 NIS 146 (263)
T ss_pred EEc
Confidence 765
No 60
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=1.7e-14 Score=102.20 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=87.1
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++|||++|++|.+++++|+++|+ .|++++|+.. ...+...++.. ...++.++.+|+
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~---~Vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~ 65 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGV---NVGLLARTEE--NLKAVAEEVEA-------------YGVKVVIATADV 65 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH-------------hCCeEEEEECCC
Confidence 35678999999999999999999999986 6788888643 11221222111 125788899999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
++++ ++..++ .++|++||++|.... .++++..+++|+.++.++++++.+. .+.+++|
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 139 (239)
T PRK07666 66 SDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDII 139 (239)
T ss_pred CCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEE
Confidence 8854 444444 378999999986431 3556778999999999999888642 2446777
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 140 ~~s 142 (239)
T PRK07666 140 NIS 142 (239)
T ss_pred EEc
Confidence 765
No 61
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.61 E-value=7.3e-15 Score=108.28 Aligned_cols=111 Identities=30% Similarity=0.403 Sum_probs=88.0
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|++|+++++.|++.|+ .|++++|+..... .+ ...++.++.+|+.+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~------~~---------------~~~~~~~~~~D~~~~~ 56 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE---EVRVLVRPTSDRR------NL---------------EGLDVEIVEGDLRDPA 56 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC---EEEEEEecCcccc------cc---------------ccCCceEEEeeCCCHH
Confidence 4799999999999999999999986 6788888643210 00 0135778899998854
Q ss_pred CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+.++++|+|||+|+.... ..++...++.|+.++.++++++.+. +++++|++|
T Consensus 57 ------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S 112 (328)
T TIGR03466 57 ------SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTS 112 (328)
T ss_pred ------HHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 688888899999999986432 3456778999999999999999986 678999876
No 62
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.61 E-value=7.1e-15 Score=98.63 Aligned_cols=120 Identities=21% Similarity=0.266 Sum_probs=88.0
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+++||.+++++|+++|. ..|+++.|+.......+...++.. ...++.++.+|+++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~~~~~~~~~l~~~l~~-------------~~~~~~~~~~D~~~~~ 65 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRSEDSEGAQELIQELKA-------------PGAKITFIECDLSDPE 65 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHH-------------TTSEEEEEESETTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeecccccccccccccccc-------------cccccccccccccccc
Confidence 5899999999999999999999954 477888876111111222222221 1378899999999865
Q ss_pred CCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+++ ..+|++|||+|... ..+.++.++++|+.++..+.+++.+. +.+++|++|
T Consensus 66 ------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~s 134 (167)
T PF00106_consen 66 ------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNIS 134 (167)
T ss_dssp ------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEE
T ss_pred ------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEec
Confidence 344443 37899999999765 25677889999999999999999883 567888765
No 63
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.8e-14 Score=102.88 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=85.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ +|++++|++. +..+...++.. ...++.++.+|++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~ 65 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQA--ELDQLVAEIRA-------------EGGEAVALAGDVR 65 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence 5678999999999999999999999986 6788888643 22221122111 1246788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
+++ ++.+++ .++|++||+||.... .+.++..+++|+.+++.+.+++.+. .+.+++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv 139 (254)
T PRK07478 66 DEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLI 139 (254)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEE
Confidence 865 344333 378999999996421 3557778999999999888776542 2345787
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 140 ~~s 142 (254)
T PRK07478 140 FTS 142 (254)
T ss_pred EEe
Confidence 765
No 64
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.61 E-value=2.1e-14 Score=103.87 Aligned_cols=128 Identities=16% Similarity=0.159 Sum_probs=88.9
Q ss_pred CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|+.....+.+++++||||+|+||++++++|+++|+ +|++.+|+.. ...+....+.. ...++.
T Consensus 1 ~~~~~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~ 62 (274)
T PRK07775 1 MPRFEPHPDRRPALVAGASSGIGAATAIELAAAGF---PVALGARRVE--KCEELVDKIRA-------------DGGEAV 62 (274)
T ss_pred CCCCCCCCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEE
Confidence 45555566788999999999999999999999986 5677777532 11111111110 124677
Q ss_pred EEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---K 143 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~ 143 (152)
++.+|+++++ ++.+++ .++|++||+||.... .+.+...+++|+.++.++.+++.+. .
T Consensus 63 ~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~ 136 (274)
T PRK07775 63 AFPLDVTDPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER 136 (274)
T ss_pred EEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 8899999865 444443 367999999997532 3456677899999999998887532 2
Q ss_pred CCcceEecC
Q psy11862 144 KLVVSLDIG 152 (152)
Q Consensus 144 ~~~~~v~~S 152 (152)
+..+||++|
T Consensus 137 ~~g~iv~is 145 (274)
T PRK07775 137 RRGDLIFVG 145 (274)
T ss_pred CCceEEEEC
Confidence 345788775
No 65
>PRK06182 short chain dehydrogenase; Validated
Probab=99.61 E-value=2.1e-14 Score=103.74 Aligned_cols=115 Identities=19% Similarity=0.262 Sum_probs=83.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|++++++|||++|+||++++++|++.|+ +|++++|+.. .++++.. .++.++.+|++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~------~l~~~~~---------------~~~~~~~~Dv~ 56 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGY---TVYGAARRVD------KMEDLAS---------------LGVHPLSLDVT 56 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHh---------------CCCeEEEeeCC
Confidence 3578999999999999999999999986 6788887532 2222211 24778899999
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.++++ ++|++||+||.... .+.++..+++|+.++..+++.+.+. .+.+++|+
T Consensus 57 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~ 130 (273)
T PRK06182 57 DEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIIN 130 (273)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 4554443 78999999997542 3567778999999987777665431 24568888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 131 is 132 (273)
T PRK06182 131 IS 132 (273)
T ss_pred Ec
Confidence 76
No 66
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.4e-14 Score=103.36 Aligned_cols=121 Identities=22% Similarity=0.306 Sum_probs=83.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEE-eecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI-LCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+++++++|||++|+||.+++++|+++|+ +|++ ..|+.. ...+..+.+.. ....+.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~---~v~i~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~ 65 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGA---LVAIHYGRNKQ--AADETIREIES-------------NGGKAFLIEADL 65 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCc
Confidence 5678999999999999999999999986 4444 345321 12222222111 124678899999
Q ss_pred CCCCCCCChhHHHHHhc-------------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCC
Q psy11862 87 LQANLGIKDSDLLMLQE-------------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKL 145 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~-------------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~ 145 (152)
++++ ++.+.++ ++|++||+||.... ...++..+++|+.++.++++++.+. .+.
T Consensus 66 ~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 139 (254)
T PRK12746 66 NSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE 139 (254)
T ss_pred CCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence 9865 4444333 58999999987432 3345668899999999999998763 123
Q ss_pred cceEecC
Q psy11862 146 VVSLDIG 152 (152)
Q Consensus 146 ~~~v~~S 152 (152)
+++|++|
T Consensus 140 ~~~v~~s 146 (254)
T PRK12746 140 GRVINIS 146 (254)
T ss_pred CEEEEEC
Confidence 5788775
No 67
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.61 E-value=1.1e-14 Score=108.59 Aligned_cols=119 Identities=24% Similarity=0.274 Sum_probs=83.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|+||++++++|++.|++ .++.+++...... .+.+..+. ...++.++.+|++|.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~d~~ 63 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYAGN-LESLADVS--------------DSERYVFEHADICDRA 63 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecCCCccch-HHHHHhcc--------------cCCceEEEEecCCCHH
Confidence 47999999999999999999999863 3444444321111 11111110 0145778899999854
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhc--------CCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKM--------KKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~S 152 (152)
++.++++ ++|+|||+||.... ......++++|+.++.+++++|.+. .++++||++|
T Consensus 64 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~S 132 (352)
T PRK10084 64 ------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHIS 132 (352)
T ss_pred ------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEec
Confidence 6777776 58999999997543 2345678999999999999999863 1356888876
No 68
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.6e-14 Score=103.90 Aligned_cols=127 Identities=20% Similarity=0.235 Sum_probs=88.9
Q ss_pred CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|++|.+ +++++++||||+|+||.++++.|++.|+ .|++++|+.. .+.+....+.. ...++.
T Consensus 1 ~~~~~~-~~~k~ilItGasggIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~ 61 (264)
T PRK07576 1 MTTMFD-FAGKNVVVVGGTSGINLGIAQAFARAGA---NVAVASRSQE--KVDAAVAQLQQ-------------AGPEGL 61 (264)
T ss_pred CCcccc-CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH-------------hCCceE
Confidence 566765 6889999999999999999999999986 6788887643 11111111111 124567
Q ss_pred EEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CC
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KK 144 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~ 144 (152)
++.+|+++++ ++.+++ .++|++||+||... ..+++...+++|+.++.++++++.+. ..
T Consensus 62 ~~~~Dv~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~ 135 (264)
T PRK07576 62 GVSADVRDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP 135 (264)
T ss_pred EEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 8899998854 344433 35799999997532 14567778999999999999988652 12
Q ss_pred CcceEecC
Q psy11862 145 LVVSLDIG 152 (152)
Q Consensus 145 ~~~~v~~S 152 (152)
.++++++|
T Consensus 136 ~g~iv~is 143 (264)
T PRK07576 136 GASIIQIS 143 (264)
T ss_pred CCEEEEEC
Confidence 25777765
No 69
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.60 E-value=2.1e-14 Score=102.57 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=86.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|++|.+++++|+++|+ +|++++|++. ...+...++.. ...++.++.+|++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 63 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGA---KVVIADLNDE--AAAAAAEALQK-------------AGGKAIGVAMDVT 63 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence 4678999999999999999999999987 6788888643 11221122111 1356888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||++|.... ...+...+++|+.++.++++.+.+. .+.++||+
T Consensus 64 ~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 137 (258)
T PRK12429 64 DEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIIN 137 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEE
Confidence 865 444443 368999999986432 3456668889999988887776532 24678988
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 138 is 139 (258)
T PRK12429 138 MA 139 (258)
T ss_pred Ec
Confidence 76
No 70
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.60 E-value=1.4e-14 Score=103.57 Aligned_cols=119 Identities=15% Similarity=0.213 Sum_probs=85.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+++||++++++|++.|+ +|++.+|+.. .+....+.. ...++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~vv~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~Dl~ 65 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGA---DIVGVGVAEA----PETQAQVEA-------------LGRKFHFITADLI 65 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCchH----HHHHHHHHH-------------cCCeEEEEEeCCC
Confidence 6789999999999999999999999997 5666666421 111111110 1256788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v 149 (152)
+++ ++.+++ .++|++|||||... ..+.|+..+++|+.+++.+.+++.+. ++ ..++|
T Consensus 66 ~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii 139 (251)
T PRK12481 66 QQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKII 139 (251)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 965 444443 46899999999643 14678889999999999998887542 12 35788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 140 ~is 142 (251)
T PRK12481 140 NIA 142 (251)
T ss_pred EeC
Confidence 775
No 71
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.60 E-value=6.4e-15 Score=107.92 Aligned_cols=98 Identities=17% Similarity=0.139 Sum_probs=76.6
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+||||||+||||++++++|++.| + |++++|... .+.+|++|++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~~--------------------------------~~~~Dl~d~~ 44 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHST--------------------------------DYCGDFSNPE 44 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEeccccc--------------------------------cccCCCCCHH
Confidence 479999999999999999999987 2 566665311 1357988854
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+.++++ ++|+|||+|+..... .+....+.+|+.++.+++++|.+. +. ++|++|
T Consensus 45 ------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~S 103 (299)
T PRK09987 45 ------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYS 103 (299)
T ss_pred ------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEc
Confidence 5777776 589999999986542 345567889999999999999987 44 788876
No 72
>PLN02253 xanthoxin dehydrogenase
Probab=99.60 E-value=2.2e-14 Score=103.87 Aligned_cols=121 Identities=16% Similarity=0.169 Sum_probs=85.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||++++++|++.|+ +|++++|+.. ...+....+ . ...++.++.+|+
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~---~v~~~~~~~~--~~~~~~~~~-------------~-~~~~~~~~~~Dl 75 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGA---KVCIVDLQDD--LGQNVCDSL-------------G-GEPNVCFFHCDV 75 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHh-------------c-CCCceEEEEeec
Confidence 46789999999999999999999999986 6677776432 111111111 0 124688999999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVV 147 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~ 147 (152)
++++ ++.+++ .++|++||+||.... .++++..+++|+.++.++++++.+. ...++
T Consensus 76 ~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 149 (280)
T PLN02253 76 TVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGS 149 (280)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCce
Confidence 9865 444443 368999999996431 3567789999999999998887642 12346
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
++++|
T Consensus 150 ii~is 154 (280)
T PLN02253 150 IVSLC 154 (280)
T ss_pred EEEec
Confidence 66654
No 73
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.60 E-value=2.4e-14 Score=102.55 Aligned_cols=121 Identities=20% Similarity=0.220 Sum_probs=86.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.++++.|+++|+ +|+.++|+.. ...+....+.. ...++.++.+|++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~i~~-------------~~~~~~~~~~Dl~ 71 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKAE--ELEEAAAHLEA-------------LGIDALWIAADVA 71 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEccCC
Confidence 5679999999999999999999999986 6777777532 11111111111 1246778999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v 149 (152)
+++ ++.+++ .++|++||++|... ..+.+...+++|+.++.++++++.+. ++.++||
T Consensus 72 d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v 145 (259)
T PRK08213 72 DEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRII 145 (259)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 865 343333 36899999998642 24566778999999999999987543 2456888
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 146 ~~s 148 (259)
T PRK08213 146 NVA 148 (259)
T ss_pred EEC
Confidence 875
No 74
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.60 E-value=2.4e-14 Score=106.20 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=86.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ +|++++|+.. .+.+...++.. ...++.++.+|++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~---~Vvl~~R~~~--~l~~~~~~~~~-------------~g~~~~~~~~Dv~ 66 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA---RLVLAARDEE--ALQAVAEECRA-------------LGAEVLVVPTDVT 66 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEeeCC
Confidence 6789999999999999999999999986 6778888542 12222222211 1356778899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
|++ ++.+++ .++|++|||||.... .+.++..+++|+.++.++.+++.+. .+..++|+
T Consensus 67 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~ 140 (330)
T PRK06139 67 DAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFIN 140 (330)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 865 454443 478999999996432 3567778999999999988887531 23357776
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 141 is 142 (330)
T PRK06139 141 MI 142 (330)
T ss_pred Ec
Confidence 64
No 75
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.5e-14 Score=104.60 Aligned_cols=116 Identities=17% Similarity=0.269 Sum_probs=84.2
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
.++++||||+|+||++++++|++.|+ +|+++.|+.. .+..+.. ....++.++.+|++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~---~v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~~~ 60 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGD---RVAATVRRPD------ALDDLKA------------RYGDRLWVLQLDVTDS 60 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH------------hccCceEEEEccCCCH
Confidence 36899999999999999999999986 6777777532 2222211 0124678899999986
Q ss_pred CCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S 152 (152)
+ ++.+.+ .++|++||+||.... .+.+...+++|+.++.++++++.+ ..+.++||++|
T Consensus 61 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s 134 (276)
T PRK06482 61 A------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVS 134 (276)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 5 344333 468999999997542 345667899999999999999843 22457888876
No 76
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.60 E-value=2.2e-14 Score=122.82 Aligned_cols=136 Identities=25% Similarity=0.297 Sum_probs=104.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhc-ChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSK-LPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.++|+|||++|++|.++++.|++.+ ....+|+++.|........+++..... .+. +......++.++.+|++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~------~~~~~~~~i~~~~gDl~ 1044 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI------WDEEWASRIEVVLGDLS 1044 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC------CchhhhcceEEEeccCC
Confidence 4789999999999999999999886 122489999997654333344432211 110 01111247889999999
Q ss_pred CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+++..+.+..+..++|+|||+|+..++..++..+...|+.++.++++++... +.++|+|+|
T Consensus 1045 ~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vS 1108 (1389)
T TIGR03443 1045 KEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVS 1108 (1389)
T ss_pred CccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEe
Confidence 9999999888888888999999999988876777777788999999999999886 678899886
No 77
>KOG1430|consensus
Probab=99.60 E-value=1e-14 Score=107.99 Aligned_cols=121 Identities=26% Similarity=0.337 Sum_probs=92.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.++.+++||||+||+|.+++.+|++.+. ...+.+++..+......+..... ....++++.+|+.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~~~---------------~~~~v~~~~~D~~ 65 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELTGF---------------RSGRVTVILGDLL 65 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhhcc---------------cCCceeEEecchh
Confidence 3567999999999999999999999974 24777777655321111111110 1368899999999
Q ss_pred CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+.. ++...+.++ .|+|+|+.... ....+..+++|+.+|.+++++|.+. +++++||+|
T Consensus 66 ~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtS 125 (361)
T KOG1430|consen 66 DAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTS 125 (361)
T ss_pred hhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEec
Confidence 866 588999999 78888775432 3346778999999999999999998 899999987
No 78
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.8e-14 Score=103.76 Aligned_cols=112 Identities=21% Similarity=0.241 Sum_probs=85.0
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
++++++||||+|+||++++++|+++|+ +|++.+|+.... . ...++.++.+|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~---~V~~~~r~~~~~------~-----------------~~~~~~~~~~D~~d 56 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY---RVFGTSRNPARA------A-----------------PIPGVELLELDVTD 56 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCChhhc------c-----------------ccCCCeeEEeecCC
Confidence 467899999999999999999999986 678888864311 0 02457789999998
Q ss_pred CCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEec
Q psy11862 89 ANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDI 151 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~ 151 (152)
++ ++.++++ ++|++|||||.... .+.+..++++|+.++.++++++.+ ..+.+++|++
T Consensus 57 ~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~i 130 (270)
T PRK06179 57 DA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINI 130 (270)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 65 4555544 57999999997532 456777999999999999888643 1256788887
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 131 s 131 (270)
T PRK06179 131 S 131 (270)
T ss_pred C
Confidence 6
No 79
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.60 E-value=3e-14 Score=101.41 Aligned_cols=121 Identities=14% Similarity=0.121 Sum_probs=85.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ +|++++|+.. ...+..+.+.. ....+.++.+|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 65 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAE--GAERVAKQIVA-------------DGGTAIAVQVDVS 65 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence 4678999999999999999999999986 6788888643 11111111111 0235678899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc----------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK----------LEAELKENVAANTRGTQRLLDIALKM---KKLVV 147 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~ 147 (152)
+.+ ++..++ .++|+|||++|... ....+...+++|+.++.++++++.+. .+.++
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 139 (250)
T PRK07774 66 DPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGA 139 (250)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcE
Confidence 865 343333 46899999999642 13456678999999999999998753 13457
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 140 iv~~s 144 (250)
T PRK07774 140 IVNQS 144 (250)
T ss_pred EEEEe
Confidence 88765
No 80
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2.9e-14 Score=104.20 Aligned_cols=121 Identities=15% Similarity=0.175 Sum_probs=85.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.++++.|+++|+ +|++++|+.. .+.+..+.+.. ...++.++.+|++
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~---~Vi~~~R~~~--~l~~~~~~l~~-------------~~~~~~~~~~Dl~ 99 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA---TVVAVARRED--LLDAVADRITR-------------AGGDAMAVPCDLS 99 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence 5678999999999999999999999986 6788888632 11111111111 1245778899999
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcce
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALK---MKKLVVS 148 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~ 148 (152)
+++ ++.++++ ++|++|||||.... .+.+...+++|+.++.++++++.+ ..+.+++
T Consensus 100 d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 173 (293)
T PRK05866 100 DLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHI 173 (293)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 865 3444443 78999999997532 234566899999999999887653 1245688
Q ss_pred EecC
Q psy11862 149 LDIG 152 (152)
Q Consensus 149 v~~S 152 (152)
|++|
T Consensus 174 v~is 177 (293)
T PRK05866 174 INVA 177 (293)
T ss_pred EEEC
Confidence 8775
No 81
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.4e-14 Score=101.59 Aligned_cols=122 Identities=15% Similarity=0.118 Sum_probs=86.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ +|++++|+... ...+..+.+.. ...++.++.+|++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~---~v~~~~r~~~~-~~~~~~~~l~~-------------~~~~~~~~~~D~~ 68 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRTDD-GLAETAEHIEA-------------AGRRAIQIAADVT 68 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCcch-HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence 6789999999999999999999999986 67778875431 11222222211 1246778899999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.++ +.++|++|||||.... .++++..+++|+.+++.+++++.+. .+.+++|+
T Consensus 69 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK06114 69 SKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN 142 (254)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence 865 34333 3467999999997532 4667888999999999988887542 23457777
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 143 is 144 (254)
T PRK06114 143 IA 144 (254)
T ss_pred EC
Confidence 64
No 82
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.59 E-value=1.5e-14 Score=105.90 Aligned_cols=109 Identities=30% Similarity=0.354 Sum_probs=84.9
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
.|+||||+||||++++++|++.|+ .|+.++|........ ...+.++.+|+.+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~---~V~~~~r~~~~~~~~----------------------~~~~~~~~~d~~~~~- 55 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGH---DVRGLDRLRDGLDPL----------------------LSGVEFVVLDLTDRD- 55 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCC---eEEEEeCCCcccccc----------------------ccccceeeecccchH-
Confidence 499999999999999999999987 678888765422100 035677888988864
Q ss_pred CCChhHHHHHhccc-cEEEeccccccchhh----HHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 92 GIKDSDLLMLQEEV-SVVFNGAASLKLEAE----LKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~~~~-d~vi~~a~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+....+.. |+|||+|+....... +...+.+|+.++.++++++... ++++||+.|
T Consensus 56 -----~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~s 115 (314)
T COG0451 56 -----LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFAS 115 (314)
T ss_pred -----HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeC
Confidence 466666666 999999998764332 3458999999999999999995 788999865
No 83
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.59 E-value=2.3e-14 Score=102.70 Aligned_cols=120 Identities=13% Similarity=0.217 Sum_probs=85.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.++++.|++.|+ .|+++.|+.. .+.+.+... ....++.++.+|++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~----~~~~~~~~~------------~~~~~~~~~~~D~~ 73 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGA---DIIITTHGTN----WDETRRLIE------------KEGRKVTFVQVDLT 73 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCcH----HHHHHHHHH------------hcCCceEEEEcCCC
Confidence 5789999999999999999999999986 6677777521 122222111 01246888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+.+ ++..++ .++|++||++|... ..+.++..+++|+.++..+.+++.+. .+.+++|+
T Consensus 74 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 147 (258)
T PRK06935 74 KPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIIN 147 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 855 344443 36899999999643 14567778999999999888887642 23467887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 148 is 149 (258)
T PRK06935 148 IA 149 (258)
T ss_pred EC
Confidence 75
No 84
>PRK05717 oxidoreductase; Validated
Probab=99.59 E-value=2.8e-14 Score=102.05 Aligned_cols=125 Identities=15% Similarity=0.050 Sum_probs=84.5
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||++++++|++.|+ +|++++|+.. ...+..+. ....+.++.+|+
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~---~v~~~~~~~~--~~~~~~~~----------------~~~~~~~~~~Dl 65 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGW---QVVLADLDRE--RGSKVAKA----------------LGENAWFIAMDV 65 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCC---EEEEEcCCHH--HHHHHHHH----------------cCCceEEEEccC
Confidence 46789999999999999999999999986 6777776432 11111111 024677899999
Q ss_pred CCCCCCCC-hhHHHHHhccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 87 LQANLGIK-DSDLLMLQEEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
++++.-.. .+++.+.+.++|++||+||.... .+.+...+++|+.++.++++++.+. ...+++|++|
T Consensus 66 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~s 143 (255)
T PRK05717 66 ADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLA 143 (255)
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEc
Confidence 98641000 01122223368999999997531 3456778999999999999999742 1235677764
No 85
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.59 E-value=2.9e-14 Score=101.47 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=83.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEE-eecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI-LCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
|.+++++||||+|+||+++++.|++.|+ .|++ ..|+.. ...+....+.. ...++.++.+|+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~---~v~~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~ 63 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGY---DIAVNYARSRK--AAEETAEEIEA-------------LGRKALAVKANV 63 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCC
Confidence 4578999999999999999999999987 4443 455432 11111111111 125678899999
Q ss_pred CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
++++ ++.++++ ++|++||++|.... .+.+...+++|+.++..+++++.+. .+.++||
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 137 (250)
T PRK08063 64 GDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII 137 (250)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9865 4444443 68999999986431 3455667899999999999988753 2446888
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 138 ~~s 140 (250)
T PRK08063 138 SLS 140 (250)
T ss_pred EEc
Confidence 876
No 86
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.59 E-value=3.6e-14 Score=102.69 Aligned_cols=121 Identities=24% Similarity=0.292 Sum_probs=85.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ +|++++|+.. ...+...++.. ...++.++.+|++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 69 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGA---KVAILDRNQE--KAEAVVAEIKA-------------AGGEALAVKADVL 69 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence 6789999999999999999999999987 6777887532 12222222111 1246788999999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEeccccccc----------------------hhhHHHHHHhhhHHHHHHHHH
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL----------------------EAELKENVAANTRGTQRLLDI 138 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~----------------------~~~~~~~~~~n~~~~~~l~~~ 138 (152)
+++ ++..+ +.++|++||+||.... .+++...+++|+.++..++++
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 143 (278)
T PRK08277 70 DKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQV 143 (278)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 864 33333 3478999999985321 355777899999999988777
Q ss_pred HHhc---CCCcceEecC
Q psy11862 139 ALKM---KKLVVSLDIG 152 (152)
Q Consensus 139 ~~~~---~~~~~~v~~S 152 (152)
+.+. .+.+++|++|
T Consensus 144 ~~~~~~~~~~g~ii~is 160 (278)
T PRK08277 144 FAKDMVGRKGGNIINIS 160 (278)
T ss_pred HHHHHHhcCCcEEEEEc
Confidence 6542 2346788775
No 87
>PRK06196 oxidoreductase; Provisional
Probab=99.59 E-value=2.2e-14 Score=105.70 Aligned_cols=117 Identities=15% Similarity=0.252 Sum_probs=83.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ +|++++|+.. ...+...++ ..+.++.+|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~---~Vv~~~R~~~--~~~~~~~~l-----------------~~v~~~~~Dl~ 81 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGA---HVIVPARRPD--VAREALAGI-----------------DGVEVVMLDLA 81 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh-----------------hhCeEEEccCC
Confidence 4678999999999999999999999986 6778888532 111111111 23678899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+.+ ++.+++ .++|++|||||.... ...++..+++|+.++..+++++.+. .+..++|++|
T Consensus 82 d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vS 155 (315)
T PRK06196 82 DLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALS 155 (315)
T ss_pred CHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 854 444433 468999999996432 3456778999999998888876532 2346888876
No 88
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.59 E-value=2.4e-14 Score=105.77 Aligned_cols=121 Identities=18% Similarity=0.184 Sum_probs=85.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ +|++.+|+.. ...+....+. .....+.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~-------------~~~~~~~~~~~Dl~ 65 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGW---HVIMACRNLK--KAEAAAQELG-------------IPPDSYTIIHIDLG 65 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHhh-------------ccCCceEEEEecCC
Confidence 4578999999999999999999999986 6788887532 1111111111 01246888999999
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CC--Ccc
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KK--LVV 147 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~ 147 (152)
+.+ ++.++++ ++|++|||||... ..+.++..+++|+.+++++++++.+. .+ .++
T Consensus 66 ~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r 139 (322)
T PRK07453 66 DLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR 139 (322)
T ss_pred CHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 865 4444432 5899999999642 13456778999999999998887642 11 248
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 140 iV~vs 144 (322)
T PRK07453 140 LVILG 144 (322)
T ss_pred EEEEc
Confidence 88875
No 89
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.2e-14 Score=105.79 Aligned_cols=123 Identities=17% Similarity=0.182 Sum_probs=86.7
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
..+++++++||||+|+||++++++|+++|+ +|++++|+.. .+.+...++.. ...++.++.+|
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~---~Vvl~~R~~~--~l~~~~~~l~~-------------~g~~~~~v~~D 65 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGA---KVVLLARGEE--GLEALAAEIRA-------------AGGEALAVVAD 65 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHH-------------cCCcEEEEEec
Confidence 347789999999999999999999999986 6777887532 11221122211 13568889999
Q ss_pred cCCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862 86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVS 148 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~ 148 (152)
++|++ ++.++ +.++|++||++|.... .+.++..+++|+.++.++.+.+.+. .+.++|
T Consensus 66 v~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~i 139 (334)
T PRK07109 66 VADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAI 139 (334)
T ss_pred CCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99865 34443 3478999999996431 4566778999999988877766532 134678
Q ss_pred EecC
Q psy11862 149 LDIG 152 (152)
Q Consensus 149 v~~S 152 (152)
|++|
T Consensus 140 V~is 143 (334)
T PRK07109 140 IQVG 143 (334)
T ss_pred EEeC
Confidence 8875
No 90
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.59 E-value=2.9e-14 Score=101.43 Aligned_cols=119 Identities=16% Similarity=0.196 Sum_probs=85.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|+++|+ .|++++|+.. ....+.+.. ...++.++.+|++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~vi~~~r~~~-~~~~~~~~~----------------~~~~~~~~~~D~~ 62 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGA---DIVGAGRSEP-SETQQQVEA----------------LGRRFLSLTADLS 62 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCchH-HHHHHHHHh----------------cCCceEEEECCCC
Confidence 6789999999999999999999999986 6777777531 111111111 1246888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v 149 (152)
+++ ++..++ .++|++||++|.... ...+.+.+++|+.++..+++++.+. .+ .+++|
T Consensus 63 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 136 (248)
T TIGR01832 63 DIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII 136 (248)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 865 343332 468999999997532 3467778999999999999988642 12 35788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 137 ~~s 139 (248)
T TIGR01832 137 NIA 139 (248)
T ss_pred EEe
Confidence 765
No 91
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.59 E-value=3.7e-14 Score=101.41 Aligned_cols=128 Identities=17% Similarity=0.160 Sum_probs=89.4
Q ss_pred Cccccc-ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862 1 MGDVAR-WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRL 79 (152)
Q Consensus 1 ~~~~~~-~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (152)
|+.+.. .+++++++||||+|+||++++++|+++|+ .|++++|+.. .+.+...++.. ...++
T Consensus 1 ~~~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~ 62 (256)
T PRK06124 1 MSILQRFSLAGQVALVTGSARGLGFEIARALAGAGA---HVLVNGRNAA--TLEAAVAALRA-------------AGGAA 62 (256)
T ss_pred CCcccccCCCCCEEEEECCCchHHHHHHHHHHHcCC---eEEEEeCCHH--HHHHHHHHHHh-------------cCCce
Confidence 344443 25789999999999999999999999986 6788888642 11221222211 12468
Q ss_pred EEEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---
Q psy11862 80 HIIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--- 142 (152)
Q Consensus 80 ~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--- 142 (152)
.++.+|+++++ ++.+++ .++|++||++|.... .+.++..+++|+.++..+.+++.+.
T Consensus 63 ~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 136 (256)
T PRK06124 63 EALAFDIADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKR 136 (256)
T ss_pred EEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 88999999865 344333 367999999996431 4567778999999999999877541
Q ss_pred CCCcceEecC
Q psy11862 143 KKLVVSLDIG 152 (152)
Q Consensus 143 ~~~~~~v~~S 152 (152)
.+.+++|++|
T Consensus 137 ~~~~~iv~~s 146 (256)
T PRK06124 137 QGYGRIIAIT 146 (256)
T ss_pred cCCcEEEEEe
Confidence 2456788765
No 92
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.1e-14 Score=101.19 Aligned_cols=121 Identities=20% Similarity=0.189 Sum_probs=86.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||+++++.|+++|+ +|++++|+.. ...+...++.. ...++.++.+|++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 66 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA---TVAFNDGLAA--EARELAAALEA-------------AGGRAHAIAADLA 66 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence 6689999999999999999999999986 5677776532 11221112111 1246888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||++|.... .+.+...++.|+.++.++++++.+. .+.+++|+
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 140 (250)
T PRK12939 67 DPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVN 140 (250)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 865 444443 468999999997431 3456778899999999999888642 12357888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 141 is 142 (250)
T PRK12939 141 LA 142 (250)
T ss_pred EC
Confidence 75
No 93
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2.3e-14 Score=105.64 Aligned_cols=123 Identities=16% Similarity=0.201 Sum_probs=87.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+++||++++++|++.|+ +|++.+|+.. ...+.++++.. . .....+.++.+|++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~---~Vil~~R~~~--~~~~~~~~l~~---------~--~~~~~v~~~~~Dl~ 75 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGA---EVILPVRNRA--KGEAAVAAIRT---------A--VPDAKLSLRALDLS 75 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH---------h--CCCCceEEEEecCC
Confidence 6789999999999999999999999986 7788888643 22222222211 0 01246888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
+.+ ++.+++ .++|++|||||.... .+.++..+.+|+.+++.+.+.+.+. .+..++|++|
T Consensus 76 d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vs 149 (313)
T PRK05854 76 SLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQS 149 (313)
T ss_pred CHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 854 344333 368999999997532 3567778999999999998887642 1235777764
No 94
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.59 E-value=4.9e-14 Score=99.74 Aligned_cols=121 Identities=20% Similarity=0.249 Sum_probs=86.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|++++++|||++|++|.++++.|+++|+ .|++++|++. ........+.. ...++.++.+|++
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~ 64 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGA---KVVIYDSNEE--AAEALAAELRA-------------AGGEARVLVFDVS 64 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChh--HHHHHHHHHHh-------------cCCceEEEEccCC
Confidence 4568999999999999999999999987 5788888643 11111111111 1356888899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+.+ .++|++||++|.... .+.+...++.|+.++.++++++.+. .+.++||+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~ 138 (246)
T PRK05653 65 DEA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVN 138 (246)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 343333 357999999986532 3456778999999999999888531 24578888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 139 ~s 140 (246)
T PRK05653 139 IS 140 (246)
T ss_pred EC
Confidence 76
No 95
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.58 E-value=3.7e-14 Score=101.49 Aligned_cols=120 Identities=14% Similarity=0.105 Sum_probs=86.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ ++++++|++... +....+.. ...++.++.+|++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~---~v~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~D~~ 65 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGA---IPVIFGRSAPDD---EFAEELRA-------------LQPRAEFVQVDLT 65 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCC---cEEEEcCChhhH---HHHHHHHh-------------cCCceEEEEccCC
Confidence 7789999999999999999999999986 566777765321 22222211 1256889999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
+++ ++.+.+ .++|++||++|... ..+++...+++|+.++..+.+.+.+. .+.++|+++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 66 DDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 865 344443 36899999999542 13567778999999999998887642 1235788775
No 96
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.1e-14 Score=102.89 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=86.3
Q ss_pred CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|+...+ +++++++||||+|+||++++++|++.|+ +|++++|+.... ...++.
T Consensus 1 ~~~~~~-~~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~r~~~~~------------------------~~~~~~ 52 (260)
T PRK06523 1 MSFFLE-LAGKRALVTGGTKGIGAATVARLLEAGA---RVVTTARSRPDD------------------------LPEGVE 52 (260)
T ss_pred CCcCcC-CCCCEEEEECCCCchhHHHHHHHHHCCC---EEEEEeCChhhh------------------------cCCcee
Confidence 344444 7789999999999999999999999986 678888864310 014577
Q ss_pred EEEcccCCCCCCCC-hhHHHHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862 81 IIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKLVV 147 (152)
Q Consensus 81 ~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~ 147 (152)
++.+|+++++.... .+.+.+.+.++|++||+||... ..+.+...+++|+.++..+.+++.+. .+.++
T Consensus 53 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 132 (260)
T PRK06523 53 FVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGV 132 (260)
T ss_pred EEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 88999998651000 0112233347899999999532 24567778999999999888776532 23457
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 133 ii~is 137 (260)
T PRK06523 133 IIHVT 137 (260)
T ss_pred EEEEe
Confidence 88765
No 97
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.4e-14 Score=103.58 Aligned_cols=118 Identities=18% Similarity=0.212 Sum_probs=84.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|.+++++||||+|+||++++++|+++|+ +|++++|+.. .+.++.. .....+.++.+|++
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~g~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 59 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALERGD---RVVATARDTA------TLADLAE------------KYGDRLLPLALDVT 59 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH------------hccCCeeEEEccCC
Confidence 3468999999999999999999999986 6788887532 1111111 01245778899998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~ 150 (152)
+++ ++...+ .++|++||+||.... .+.++.++++|+.++..+++++.+ ..+.+++|+
T Consensus 60 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 133 (275)
T PRK08263 60 DRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQ 133 (275)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 343333 367999999997542 457788999999999999888742 124568888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 134 vs 135 (275)
T PRK08263 134 IS 135 (275)
T ss_pred Ec
Confidence 75
No 98
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.58 E-value=3.8e-14 Score=101.28 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=85.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|+++|+ +|++.+|+.. ...+....+.. ...++..+.+|++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~ 68 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA---QVAIAARHLD--ALEKLADEIGT-------------SGGKVVPVCCDVS 68 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCeEEEEEccCC
Confidence 6789999999999999999999999986 6777777532 12221111111 1246778899999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v 149 (152)
+++ ++.++ +.++|++|||+|.... .+.++..+++|+.++..+.+++.+. .+ ..++|
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 142 (253)
T PRK05867 69 QHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVII 142 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEE
Confidence 865 34333 3478999999997532 4567778999999999999987642 11 24577
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 143 ~~s 145 (253)
T PRK05867 143 NTA 145 (253)
T ss_pred EEC
Confidence 664
No 99
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.58 E-value=4.5e-14 Score=100.43 Aligned_cols=121 Identities=17% Similarity=0.184 Sum_probs=85.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ .|++++|+.. ...+....+.. ...++.++.+|++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~d~~ 62 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGA---KVAVFDLNRE--AAEKVAADIRA-------------KGGNAQAFACDIT 62 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence 4678999999999999999999999986 6777777542 11111111111 1246888999998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~ 150 (152)
+.+ ++.+++ .++|++||++|... ....++..+++|+.++.++++++.+ ..+.+++++
T Consensus 63 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 136 (250)
T TIGR03206 63 DRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVN 136 (250)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 854 444443 36899999998643 1345667899999999999888763 124567887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 137 is 138 (250)
T TIGR03206 137 IA 138 (250)
T ss_pred EC
Confidence 75
No 100
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.58 E-value=3.9e-14 Score=103.82 Aligned_cols=119 Identities=26% Similarity=0.314 Sum_probs=84.6
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+++||||+|++|.+++++|++.|++. .|++++|...... .+.+..+.. ..++.++.+|+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~Dl~~~~- 63 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDKLTYAGN-LENLADLED--------------NPRYRFVKGDIGDRE- 63 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecCCCcchh-hhhhhhhcc--------------CCCcEEEEcCCcCHH-
Confidence 58999999999999999999986433 6677766322111 111111100 136788899999865
Q ss_pred CCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 92 GIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+++++ +|+|||+|+.... ...+..++++|+.++.++++++.+.....++|++|
T Consensus 64 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 124 (317)
T TIGR01181 64 -----LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHIS 124 (317)
T ss_pred -----HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 68888776 8999999997543 34566688999999999999998752223788875
No 101
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.58 E-value=1.4e-14 Score=102.03 Aligned_cols=110 Identities=28% Similarity=0.386 Sum_probs=85.5
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+||||+|++|++++++|++.|+ .|+.+.|+...... ... ..++.++.+|+.+.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~---~v~~~~~~~~~~~~----~~~----------------~~~~~~~~~dl~~~~-- 55 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH---EVIVLSRSSNSESF----EEK----------------KLNVEFVIGDLTDKE-- 55 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT---EEEEEESCSTGGHH----HHH----------------HTTEEEEESETTSHH--
T ss_pred EEEEccCCHHHHHHHHHHHHcCC---cccccccccccccc----ccc----------------cceEEEEEeeccccc--
Confidence 79999999999999999999987 46677776542211 000 027889999999744
Q ss_pred CChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 93 IKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.++++. +|+|||+|+.... .......++.|+.++.++++++.+. +++++|++|
T Consensus 56 ----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~s 115 (236)
T PF01370_consen 56 ----QLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLS 115 (236)
T ss_dssp ----HHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred ----cccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 68888875 5999999997531 3456678999999999999999998 568999875
No 102
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.58 E-value=5.3e-14 Score=100.18 Aligned_cols=120 Identities=20% Similarity=0.182 Sum_probs=85.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|++|.+++++|++.|+ +|+++.|+.. ...+....+. ...++.++.+|++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~--------------~~~~~~~~~~D~~ 63 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDAE--AAERVAAAIA--------------AGGRAFARQGDVG 63 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC---eEEEecCCHH--HHHHHHHHHh--------------cCCeEEEEEcCCC
Confidence 5688999999999999999999999986 6778777642 1122111111 1256888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||++|... ..+.+...+.+|+.++.++.+.+.+ ..+.+++++
T Consensus 64 ~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 137 (252)
T PRK06138 64 SAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVN 137 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEE
Confidence 865 444443 37899999999643 2455666899999999888877643 124568887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 138 ~s 139 (252)
T PRK06138 138 TA 139 (252)
T ss_pred EC
Confidence 75
No 103
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=4.7e-14 Score=100.33 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=87.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|++|.+++++|++.|+ +|++++|+.. ...+....+.. ..++.++.+|++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~--------------~~~~~~~~~D~~ 63 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGA---RVVVTDRNEE--AAERVAAEILA--------------GGRAIAVAADVS 63 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHhc--------------CCeEEEEECCCC
Confidence 5678999999999999999999999987 5788888643 11111111110 246888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
+++ ++..++ .++|+|||++|... ..+.+...+++|+.++..+++.+.+. .+.++||
T Consensus 64 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 137 (251)
T PRK07231 64 DEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIV 137 (251)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 865 454444 36799999998642 13556778999999999888887642 2456788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 138 ~~s 140 (251)
T PRK07231 138 NVA 140 (251)
T ss_pred EEc
Confidence 875
No 104
>PRK08589 short chain dehydrogenase; Validated
Probab=99.58 E-value=5.2e-14 Score=101.71 Aligned_cols=120 Identities=15% Similarity=0.158 Sum_probs=85.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ +|++++|+ . ...+...++.. ...++.++.+|++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~---~vi~~~r~-~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 64 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGA---YVLAVDIA-E--AVSETVDKIKS-------------NGGKAKAYHVDIS 64 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCc-H--HHHHHHHHHHh-------------cCCeEEEEEeecC
Confidence 6789999999999999999999999986 67888875 2 22222222211 1246888999999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEe
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~ 150 (152)
+++ ++..+ +.++|++|||||.... .+.++.++++|+.++..+++++.+. ....++|+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~ 138 (272)
T PRK08589 65 DEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIIN 138 (272)
T ss_pred CHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 865 33333 3468999999997531 3456778999999999888887642 11257887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 139 is 140 (272)
T PRK08589 139 TS 140 (272)
T ss_pred eC
Confidence 75
No 105
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.58 E-value=5e-14 Score=101.30 Aligned_cols=118 Identities=18% Similarity=0.201 Sum_probs=86.9
Q ss_pred CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|+.+.+ +++++++||||+|+||.++++.|+++|+ +|++.+|+.... ...++.
T Consensus 1 ~~~~~~-l~~k~vlItG~s~gIG~~la~~l~~~G~---~v~~~~~~~~~~------------------------~~~~~~ 52 (266)
T PRK06171 1 MQDWLN-LQGKIIIVTGGSSGIGLAIVKELLANGA---NVVNADIHGGDG------------------------QHENYQ 52 (266)
T ss_pred Cccccc-CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCcccc------------------------ccCceE
Confidence 455553 6789999999999999999999999986 667777754311 013577
Q ss_pred EEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc----------------chhhHHHHHHhhhHHHHHHHH
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK----------------LEAELKENVAANTRGTQRLLD 137 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~----------------~~~~~~~~~~~n~~~~~~l~~ 137 (152)
++.+|+++++ ++.+++ .++|++||+||... ..+.++..+++|+.++..+++
T Consensus 53 ~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (266)
T PRK06171 53 FVPTDVSSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ 126 (266)
T ss_pred EEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence 8899999865 344433 36899999999632 235567789999999999998
Q ss_pred HHHhc---CCCcceEecC
Q psy11862 138 IALKM---KKLVVSLDIG 152 (152)
Q Consensus 138 ~~~~~---~~~~~~v~~S 152 (152)
++.+. .+..++|++|
T Consensus 127 ~~~~~~~~~~~g~iv~is 144 (266)
T PRK06171 127 AVARQMVKQHDGVIVNMS 144 (266)
T ss_pred HHHHHHHhcCCcEEEEEc
Confidence 88753 1335788765
No 106
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.58 E-value=5e-14 Score=100.69 Aligned_cols=121 Identities=21% Similarity=0.173 Sum_probs=86.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+.+++++||||+|+||+++++.|+++|+ .|++++|++. ...+....+.. ...++.++.+|++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~ 64 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAE--RLDEVAAEIDD-------------LGRRALAVPTDIT 64 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHH-------------hCCceEEEecCCC
Confidence 5679999999999999999999999997 6778887542 11221111111 1246788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~ 150 (152)
+++ ++..++ .++|++||+||... ..+.+...+++|+.++..+++++.+. ...++||+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~ 138 (258)
T PRK07890 65 DED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVM 138 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 865 343333 46899999998642 14667778999999999999998752 12247887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 139 ~s 140 (258)
T PRK07890 139 IN 140 (258)
T ss_pred Ee
Confidence 65
No 107
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.58 E-value=4.5e-14 Score=101.92 Aligned_cols=123 Identities=15% Similarity=0.044 Sum_probs=84.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|++.|+ .|++.+|++. .+.+.... ...+.++.+|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~---~v~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~ 60 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGA---RVAIGDLDEA------LAKETAAE-------------LGLVVGGPLDVT 60 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHHH-------------hccceEEEccCC
Confidence 5678999999999999999999999986 5677777532 12211110 124678899999
Q ss_pred CCCCC-CChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 88 QANLG-IKDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+++.- ...+.+.+.+.++|++||+||.... .+.+..++++|+.++..+.+.+.+. .+.+++|++|
T Consensus 61 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~is 136 (273)
T PRK07825 61 DPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVA 136 (273)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 86510 0011122233468999999997531 4457778999999999988887542 2456788876
No 108
>PRK07985 oxidoreductase; Provisional
Probab=99.57 E-value=7.5e-14 Score=102.06 Aligned_cols=129 Identities=14% Similarity=0.104 Sum_probs=85.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ .|++..|+..... .+.+.+... ....++.++.+|++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~---~Vi~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~Dl~ 110 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA---DVAISYLPVEEED-AQDVKKIIE------------ECGRKAVLLPGDLS 110 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEecCCcchhh-HHHHHHHHH------------HcCCeEEEEEccCC
Confidence 5678999999999999999999999997 5666665433222 122222111 01246778899999
Q ss_pred CCCCCCC-hhHHHHHhccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 88 QANLGIK-DSDLLMLQEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
+++.-.. .+++.+.+.++|++||+||... ..+++...+++|+.++..+++++.+. ....++|++|
T Consensus 111 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iS 185 (294)
T PRK07985 111 DEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTS 185 (294)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEEC
Confidence 8641000 0112222346899999998632 14667889999999999999998753 1225788775
No 109
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.57 E-value=7.7e-14 Score=100.22 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=85.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ .|++.+|+.. ...+....+ ..++.++.+|++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~Dl~ 62 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGA---RVAIVDIDAD--NGAAVAASL----------------GERARFIATDIT 62 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh----------------CCeeEEEEecCC
Confidence 5689999999999999999999999986 6788888532 111111110 246788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
+++ ++.+++ .++|++||+||... ..+.+...+++|+.++..+++++.+. ++.+++|++|
T Consensus 63 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is 136 (261)
T PRK08265 63 DDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT 136 (261)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 865 343333 46899999998642 24567788999999999999887642 2335777765
No 110
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.57 E-value=4.8e-14 Score=101.18 Aligned_cols=120 Identities=14% Similarity=0.196 Sum_probs=85.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ +|++++|+.. ..+....+.. ...++.++.+|++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~---~Vv~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~Dl~ 64 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGA---NLILLDISPE---IEKLADELCG-------------RGHRCTAVVADVR 64 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHH---HHHHHHHHHH-------------hCCceEEEECCCC
Confidence 5679999999999999999999999986 6777777532 1222222211 1246778899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++..++ .++|++||++|.... .+.++..+++|+.++..+++++.+. .+..++|+
T Consensus 65 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (263)
T PRK08226 65 DPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVM 138 (263)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 344433 368999999996432 4556678999999999999987642 13457777
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 139 is 140 (263)
T PRK08226 139 MS 140 (263)
T ss_pred EC
Confidence 64
No 111
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.57 E-value=3.7e-14 Score=101.25 Aligned_cols=118 Identities=15% Similarity=0.206 Sum_probs=85.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.++++.|+++|+ +|++++|+.. ..+..... ....+.++.+|++
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~---~Vi~~~r~~~---~~~~~~~~---------------~~~~~~~~~~Dl~ 71 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSED---VAEVAAQL---------------LGGNAKGLVCDVS 71 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHh---------------hCCceEEEEecCC
Confidence 5688999999999999999999999986 6778888543 11111111 0245668899998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++..++ .++|++||++|.... .+.+...+++|+.++.++++++.+. .+.++||+
T Consensus 72 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 145 (255)
T PRK06841 72 DSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVN 145 (255)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEE
Confidence 865 344433 368999999997532 3456678999999999999988652 23568888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 146 ~s 147 (255)
T PRK06841 146 LA 147 (255)
T ss_pred Ec
Confidence 75
No 112
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=7.9e-14 Score=99.73 Aligned_cols=116 Identities=22% Similarity=0.308 Sum_probs=81.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ +|++..++.. +..+.+.. .++.++.+|++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~---~v~~~~~~~~-----~~~~~l~~---------------~~~~~~~~Dl~ 61 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGA---KVAVLYNSAE-----NEAKELRE---------------KGVFTIKCDVG 61 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCcH-----HHHHHHHh---------------CCCeEEEecCC
Confidence 5689999999999999999999999987 5566555322 11122111 24678899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||++|... ..+.+...+++|+.++..+.+.+.+. .+.+++|+
T Consensus 62 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~ 135 (255)
T PRK06463 62 NRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVN 135 (255)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 344433 36899999998743 14567778999999988877766431 23467887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 136 is 137 (255)
T PRK06463 136 IA 137 (255)
T ss_pred Ec
Confidence 75
No 113
>PRK09186 flagellin modification protein A; Provisional
Probab=99.57 E-value=7.3e-14 Score=99.74 Aligned_cols=123 Identities=19% Similarity=0.218 Sum_probs=84.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|++.|+ +|++.+|+.. ...+...++... .....+.++.+|++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~---~v~~~~r~~~--~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~ 65 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGG---IVIAADIDKE--ALNELLESLGKE-----------FKSKKLSLVELDIT 65 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecChH--HHHHHHHHHHhh-----------cCCCceeEEEecCC
Confidence 5689999999999999999999999987 5677777543 222222222110 01234667799999
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEecccccc----------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK----------LEAELKENVAANTRGTQRLLDIALKM---KKLVV 147 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~ 147 (152)
+++ ++.+++. ++|++||||+... ....+...+++|+.++..+++++.+. .+.++
T Consensus 66 d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T PRK09186 66 DQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGN 139 (256)
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCce
Confidence 865 4444443 4899999997432 13456778899999998887776542 24568
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 140 iv~~s 144 (256)
T PRK09186 140 LVNIS 144 (256)
T ss_pred EEEEe
Confidence 88875
No 114
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.57 E-value=6.3e-14 Score=95.70 Aligned_cols=119 Identities=19% Similarity=0.254 Sum_probs=85.4
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC-CCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA-KRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
+++||||.|++|..+++.|++++. ++++++.|+ .......+.+.++... ...+.++.+|++|++
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l~~~-------------g~~v~~~~~Dv~d~~ 66 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIRELESA-------------GARVEYVQCDVTDPE 66 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHHT-------------T-EEEEEE--TTSHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHHHhC-------------CCceeeeccCccCHH
Confidence 689999999999999999999974 689999998 3334455566665443 368999999999965
Q ss_pred CCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+++. +++.|||+||... .++.+...+...+.++.+|.++.... .++.||++|
T Consensus 67 ------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~S 135 (181)
T PF08659_consen 67 ------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFS 135 (181)
T ss_dssp ------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEE
T ss_pred ------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEEC
Confidence 5666653 5799999999754 25667778999999999999999885 678888765
No 115
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.57 E-value=3.5e-14 Score=102.79 Aligned_cols=123 Identities=15% Similarity=0.169 Sum_probs=85.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|++++++||||+|++|.++++.|+++|+ .|++++|+.. ...+........ ....++.++.+|++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~D~~ 64 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGY---LVIATMRNPE--KQENLLSQATQL-----------NLQQNIKVQQLDVT 64 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCC---EEEEEeCCHH--HHHHHHHHHHhc-----------CCCCceeEEecCCC
Confidence 4578999999999999999999999986 6778887643 111111111100 01246888999999
Q ss_pred CCCCCCChhHHHH------HhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 88 QANLGIKDSDLLM------LQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~------~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+++ ++.. .+.++|++||++|.... .+.+...+++|+.++.++++.+.+. .+.+++|++
T Consensus 65 d~~------~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~v 138 (280)
T PRK06914 65 DQN------SIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINI 138 (280)
T ss_pred CHH------HHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 865 3332 23468999999986542 3566778899999999998886431 245688887
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 139 s 139 (280)
T PRK06914 139 S 139 (280)
T ss_pred C
Confidence 5
No 116
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.57 E-value=1.4e-13 Score=99.59 Aligned_cols=127 Identities=14% Similarity=0.213 Sum_probs=86.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+++++++||||+|+||.++++.|+++|+ +|++++|+.... .....+.+... .+. ....++.++.+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~-----~~~----~~~~~~~~~~~D~ 71 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAEPHPKLPGTIHTAAE-----EIE----AAGGQALPLVGDV 71 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecccccccchhhHHHHHHH-----HHH----hcCCceEEEEecC
Confidence 5678999999999999999999999986 678888865321 11111211110 011 1134688899999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
++++ ++.+++ .++|++||+||.... .+.+...+++|+.++.++++++.+. .+-.+++
T Consensus 72 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv 145 (273)
T PRK08278 72 RDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHIL 145 (273)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEE
Confidence 9965 344433 378999999997431 3556778999999999999998642 1234666
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 146 ~is 148 (273)
T PRK08278 146 TLS 148 (273)
T ss_pred EEC
Confidence 654
No 117
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.56 E-value=6.9e-14 Score=100.24 Aligned_cols=117 Identities=15% Similarity=0.068 Sum_probs=83.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
|++++||||+|+||++++++|++.|+ +|++++|+.. .+.++... .. ...+.++.+|+++.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~~---------~~--~~~~~~~~~D~~~~ 60 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGW---RVGAYDINEA------GLAALAAE---------LG--AGNAWTGALDVTDR 60 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH------HHHHHHHH---------hc--CCceEEEEecCCCH
Confidence 47899999999999999999999986 6778887532 12211110 00 24688899999885
Q ss_pred CCCCChhHHHHHh--------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 90 NLGIKDSDLLMLQ--------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~~--------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
. ++.+.+ .++|++||+||.... .++++..+++|+.++..+++++.+. .+..++|++
T Consensus 61 ~------~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 134 (260)
T PRK08267 61 A------AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINT 134 (260)
T ss_pred H------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 5 344433 357999999997532 3567778999999999998887531 234677776
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 135 s 135 (260)
T PRK08267 135 S 135 (260)
T ss_pred C
Confidence 5
No 118
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.1e-13 Score=98.16 Aligned_cols=125 Identities=18% Similarity=0.174 Sum_probs=85.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|+++|+ .|+++.|..... .+....+.. ++ ......+.++.+|++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~---~v~~~~~~~~~~--~~~~~~~~~-----~~----~~~~~~~~~~~~Dl~ 69 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGA---DVIVLDIHPMRG--RAEADAVAA-----GI----EAAGGKALGLAFDVR 69 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEcCccccc--HHHHHHHHH-----HH----HhcCCcEEEEEccCC
Confidence 5678999999999999999999999987 556665532211 111111110 00 011356889999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v 149 (152)
+++ ++.+.+ .++|++||++|... ..+.+...+++|+.++.++++++.+ ..+.+++|
T Consensus 70 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 143 (249)
T PRK12827 70 DFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIV 143 (249)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEE
Confidence 865 344443 36899999999754 1355677899999999999999872 12456788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 144 ~~s 146 (249)
T PRK12827 144 NIA 146 (249)
T ss_pred EEC
Confidence 775
No 119
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.56 E-value=9.7e-14 Score=99.84 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=86.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||.+++++|+++|+ +|++..|+.. ...+....+.. .+.++.++.+|++
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~---~vv~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 69 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA---TIVFNDINQE--LVDKGLAAYRE-------------LGIEAHGYVCDVT 69 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence 5789999999999999999999999986 5677776532 22222222111 1246888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||++|... ..+.+...+++|+.++..+.+++.+. .+.++||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 143 (265)
T PRK07097 70 DED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIIN 143 (265)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 865 444443 35899999999754 24567778999999999888887641 24567887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 144 is 145 (265)
T PRK07097 144 IC 145 (265)
T ss_pred Ec
Confidence 65
No 120
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.56 E-value=7.3e-14 Score=102.18 Aligned_cols=120 Identities=18% Similarity=0.187 Sum_probs=85.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.++++.|++.|+ +|++++|+.. .+.+...++ . ....+..+.+|++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~l~~~~~~l-------------~-~~~~~~~~~~Dv~ 67 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGA---KLALVDLEEA--ELAALAAEL-------------G-GDDRVLTVVADVT 67 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh-------------c-CCCcEEEEEecCC
Confidence 6789999999999999999999999986 6788887532 111111111 0 0245667779999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEec
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~ 151 (152)
+++ ++.++ +.++|++|||||... ..+.++..+++|+.++.++++++.+. ...+++|++
T Consensus 68 d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~i 141 (296)
T PRK05872 68 DLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQV 141 (296)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 865 34333 346899999999753 14567789999999999999988652 123578776
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 142 s 142 (296)
T PRK05872 142 S 142 (296)
T ss_pred e
Confidence 5
No 121
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.56 E-value=8.9e-14 Score=98.57 Aligned_cols=118 Identities=20% Similarity=0.259 Sum_probs=83.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|+++|+ .|+...|+.. .++.+.. ....++.++.+|++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTRVE------KLEALAA------------ELGERVKIFPANLS 62 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHHHH------------HhCCceEEEEccCC
Confidence 5678999999999999999999999986 5566555421 1221111 00246778899999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+.+ ++..+ +.++|++||+||... ..+++..++++|+.++.++++++.+. .+.++||+
T Consensus 63 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 136 (245)
T PRK12936 63 DRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIIN 136 (245)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 855 34333 346899999999643 23567778999999999998887532 24567888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 137 ~s 138 (245)
T PRK12936 137 IT 138 (245)
T ss_pred EC
Confidence 75
No 122
>KOG1201|consensus
Probab=99.56 E-value=7e-14 Score=100.12 Aligned_cols=127 Identities=17% Similarity=0.188 Sum_probs=92.1
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
...++++++||||++|+|++++.+++++|. ++++-+.++.+ ..+........ .++..+.||
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~~--~~etv~~~~~~--------------g~~~~y~cd 94 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQG--NEETVKEIRKI--------------GEAKAYTCD 94 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCC---eEEEEeccccc--hHHHHHHHHhc--------------CceeEEEec
Confidence 357899999999999999999999999984 67777766542 24444433221 368889999
Q ss_pred cCCCCC-CCChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 86 ILQANL-GIKDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+++++- -...+++++.++.+|++|||||+... .+..+.++++|+.+.++.+++..+. .+-+|+|-+
T Consensus 95 is~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~I 171 (300)
T KOG1201|consen 95 ISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTI 171 (300)
T ss_pred CCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEe
Confidence 999761 00022344555688999999998652 6677889999999999999988642 134577765
No 123
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.56 E-value=9e-14 Score=98.85 Aligned_cols=122 Identities=19% Similarity=0.240 Sum_probs=84.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|+++|+ .+++..++.. ....+....+.. ...++.++.+|++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~l~~-------------~~~~~~~~~~D~~ 66 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGA---KVVINYNSSK-EAAENLVNELGK-------------EGHDVYAVQADVS 66 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEcCCcH-HHHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence 5679999999999999999999999987 4454443221 111221122211 1246888999999
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.++++ .+|++||+||.... .+.+.+.+++|+.++..+++++.+. .+.+++|+
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 140 (247)
T PRK12935 67 KVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIIS 140 (247)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 865 4444443 58999999997442 2567778999999999999998752 23457888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 141 ~s 142 (247)
T PRK12935 141 IS 142 (247)
T ss_pred Ec
Confidence 75
No 124
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.56 E-value=7.4e-14 Score=99.71 Aligned_cols=113 Identities=20% Similarity=0.183 Sum_probs=84.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ .|++++|+... .. ....+.++.+|++
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~---~v~~~~r~~~~--------~~---------------~~~~~~~~~~D~~ 57 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGA---TVVVCGRRAPE--------TV---------------DGRPAEFHAADVR 57 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCChhh--------hh---------------cCCceEEEEccCC
Confidence 5789999999999999999999999986 67888875431 00 0246788899998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v 149 (152)
+++ ++.+++ .++|++||+||... ..+.++..+++|+.++..+++++.+. .+.+++|
T Consensus 58 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii 131 (252)
T PRK07856 58 DPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV 131 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 864 344433 36799999998643 14567778999999999999988641 1235788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 132 ~is 134 (252)
T PRK07856 132 NIG 134 (252)
T ss_pred EEc
Confidence 775
No 125
>PRK08643 acetoin reductase; Validated
Probab=99.55 E-value=1.5e-13 Score=98.29 Aligned_cols=119 Identities=18% Similarity=0.197 Sum_probs=82.9
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.+++++|+++|+ +|++++|+.. ...+...++.. ...++.++.+|++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~ 63 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNEE--TAQAAADKLSK-------------DGGKAIAVKADVSDR 63 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEECCCCCH
Confidence 57999999999999999999999986 6778887542 11221122111 124677899999986
Q ss_pred CCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEec
Q psy11862 90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~ 151 (152)
+ ++.+++ .++|++||+||.... .+.++..+++|+.++..+++.+.+. +...++|++
T Consensus 64 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 137 (256)
T PRK08643 64 D------QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINA 137 (256)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5 343333 368999999986431 4556778999999998888777542 122467776
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 138 s 138 (256)
T PRK08643 138 T 138 (256)
T ss_pred C
Confidence 5
No 126
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.55 E-value=1.2e-13 Score=97.81 Aligned_cols=122 Identities=21% Similarity=0.284 Sum_probs=84.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|++|++++++|+++|+ .+++..|+.. ...+.+.... .....++.++.+|++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~---~v~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~~D~~ 66 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGA---DVVVHYRSDE--EAAEELVEAV------------EALGRRAQAVQADVT 66 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCCH--HHHHHHHHHH------------HhcCCceEEEECCcC
Confidence 4568999999999999999999999987 4455555432 1111121110 011256888999998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||++|.... .+.+...+++|+.++.++++.+.+ ..+.+++|+
T Consensus 67 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~ 140 (249)
T PRK12825 67 DKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVN 140 (249)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 454443 367999999996432 445677899999999999988843 224678888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 141 ~S 142 (249)
T PRK12825 141 IS 142 (249)
T ss_pred EC
Confidence 76
No 127
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.3e-13 Score=97.17 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=85.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||+++++.|+++|+ +|++++|+.. ...+.+..+.. .....+.+|+.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~---------------~~~~~~~~D~~ 64 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA---RVALIGRGAA--PLSQTLPGVPA---------------DALRIGGIDLV 64 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC---eEEEEeCChH--hHHHHHHHHhh---------------cCceEEEeecC
Confidence 5689999999999999999999999986 6788888643 22222222211 24567789998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+.+ ++..++ .++|+|||++|... ..+.+.+.+..|+.++.++++++.+. .+.+++|+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (239)
T PRK12828 65 DPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVN 138 (239)
T ss_pred CHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEE
Confidence 854 344433 36899999998643 13456667899999999998887531 24678888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 139 ~s 140 (239)
T PRK12828 139 IG 140 (239)
T ss_pred EC
Confidence 75
No 128
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.55 E-value=1.2e-13 Score=98.11 Aligned_cols=122 Identities=16% Similarity=0.161 Sum_probs=83.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|++++++|||++|+||++++++|++.|+ .+++..++.. ....+.+.++.. ....+..+.+|++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~---~vv~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~ 63 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGF---KVVAGCGPNS-PRRVKWLEDQKA-------------LGFDFIASEGNVG 63 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCCh-HHHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence 4678999999999999999999999986 4555443221 112222222211 1246778899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+.+ ++.+.+ .++|++||++|... ..+.+..++++|+.+++.+.+++.+. .+.+++|+
T Consensus 64 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 137 (246)
T PRK12938 64 DWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIIN 137 (246)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 864 343333 46899999999753 24567778999999999888776542 24568888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 138 is 139 (246)
T PRK12938 138 IS 139 (246)
T ss_pred Ee
Confidence 75
No 129
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.55 E-value=4.5e-14 Score=100.45 Aligned_cols=121 Identities=16% Similarity=0.149 Sum_probs=84.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+++++++||||+|+||++++++|+++|+ .|++++|+... . .+.+. .+.. ...++.++.+|+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~---~V~~~~r~~~~-~-~~~~~~~l~~-------------~~~~~~~~~~D~ 65 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGA---HVVVNYRQKAP-R-ANKVVAEIEA-------------AGGRASAVGADL 65 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCchH-h-HHHHHHHHHh-------------cCCceEEEEcCC
Confidence 5678999999999999999999999987 56777775421 1 12111 1111 124678899999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
++++ ++.+++ .++|++||+||... ...++...+++|+.++.++++++.+. ....++|++|
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is 134 (248)
T PRK07806 66 TDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT 134 (248)
T ss_pred CCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence 9865 444433 36899999998642 22345567889999999999999864 1234788775
No 130
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.1e-13 Score=97.82 Aligned_cols=120 Identities=20% Similarity=0.241 Sum_probs=84.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+.+++++||||+|++|++++++|+++|+ +|++++|++. ...+....+.. ..++.++.+|+.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~--------------~~~~~~~~~D~~ 64 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY---KVAITARDQK--ELEEAAAELNN--------------KGNVLGLAADVR 64 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEeeCCHH--HHHHHHHHHhc--------------cCcEEEEEccCC
Confidence 4578999999999999999999999886 6788888542 11111111110 146888999998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEec
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~ 151 (152)
+++ ++...+ .++|++||++|.... .+.+.+.+++|+.++..+++++.+. .+.+++|++
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (237)
T PRK07326 65 DEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINI 138 (237)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEE
Confidence 854 344333 378999999986432 3456678999999999998887642 134578876
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 139 s 139 (237)
T PRK07326 139 S 139 (237)
T ss_pred C
Confidence 5
No 131
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.55 E-value=1.8e-13 Score=97.52 Aligned_cols=125 Identities=13% Similarity=0.094 Sum_probs=83.8
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++|||++|++|++++++|+++|+ .|++++|+.. . .+.+..... ....++.++.+|+.++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~---~v~~~~r~~~--~-~~~~~~~~~------------~~~~~~~~~~~D~~~~ 62 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA---NVVVNDLGEA--G-AEAAAKVAT------------DAGGSVIYLVADVTKE 62 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHHH------------hcCCceEEEECCCCCH
Confidence 46899999999999999999999986 6788888632 1 111111100 0124688899999986
Q ss_pred CCCC-ChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862 90 NLGI-KDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~-~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S 152 (152)
+.-. ....+.+.+.++|++||+++.... ...++.++..|+.++..+++++.+ ..+.+++|++|
T Consensus 63 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~s 136 (255)
T TIGR01963 63 DEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIA 136 (255)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4100 000222333468999999986542 345667888999999999888743 12467888876
No 132
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.55 E-value=1.1e-13 Score=98.61 Aligned_cols=115 Identities=22% Similarity=0.266 Sum_probs=82.4
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|++|.++++.|+++|+ +|++++|++. .+..+.. . ...++.++.+|+++.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~---------~---~~~~~~~~~~Dl~~~~ 59 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQE------RLQELKD---------E---LGDNLYIAQLDVRNRA 59 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH---------H---hccceEEEEecCCCHH
Confidence 5799999999999999999999986 6778888532 1222111 0 0246788999999864
Q ss_pred CCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
++...+ .++|++||++|... ..+.++.++++|+.++..+++.+.+. .+.+++|++|
T Consensus 60 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 133 (248)
T PRK10538 60 ------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG 133 (248)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 344333 37899999998642 24566778999999988888877532 2456888875
No 133
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.3e-13 Score=98.48 Aligned_cols=121 Identities=18% Similarity=0.231 Sum_probs=85.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ +|++++|+.. ...+....+.. ...++.++.+|++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~ 66 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGA---KVVVADRDAA--GGEETVALIRE-------------AGGEALFVACDVT 66 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence 5689999999999999999999999986 6788888643 12222222111 1256888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v 149 (152)
+++ ++..++ .++|++||++|... ..+++...+++|+.++..+++++.+ ..+.+++|
T Consensus 67 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii 140 (253)
T PRK06172 67 RDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIV 140 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 854 344333 36799999999642 1356677899999999888776543 12345777
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 141 ~~s 143 (253)
T PRK06172 141 NTA 143 (253)
T ss_pred EEC
Confidence 765
No 134
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.3e-13 Score=99.90 Aligned_cols=112 Identities=21% Similarity=0.251 Sum_probs=80.1
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||+++++.|++.|+ +|++.+|+.. .+.++.. ..+.++.+|++++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~---~Vi~~~r~~~------~~~~l~~---------------~~~~~~~~Dl~d~ 59 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW---RVFATCRKEE------DVAALEA---------------EGLEAFQLDYAEP 59 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH---------------CCceEEEccCCCH
Confidence 57899999999999999999999986 6788888532 2222211 2467889999985
Q ss_pred CCCCChhHHHHHh--------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH----hcCCCcceEe
Q psy11862 90 NLGIKDSDLLMLQ--------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL----KMKKLVVSLD 150 (152)
Q Consensus 90 ~~~~~~~~~~~~~--------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~ 150 (152)
+ ++..++ .++|++||+||.... .+.++..+++|+.++..+.+.+. +. +.+++|+
T Consensus 60 ~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~ 132 (277)
T PRK05993 60 E------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQ 132 (277)
T ss_pred H------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEE
Confidence 4 333332 357999999986532 34567789999999776655543 33 4568888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 133 is 134 (277)
T PRK05993 133 CS 134 (277)
T ss_pred EC
Confidence 76
No 135
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.2e-13 Score=98.59 Aligned_cols=119 Identities=18% Similarity=0.135 Sum_probs=84.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||++++++|++.|+ .|++++|+.. + .+.+.+.. .....++.++.+|++++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~---~v~~~~r~~~--~-~~~~~~~~------------~~~~~~~~~~~~D~~~~ 63 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH---NVIAGVQIAP--Q-VTALRAEA------------ARRGLALRVEKLDLTDA 63 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHH------------HhcCCcceEEEeeCCCH
Confidence 56899999999999999999999986 6777887532 1 11111111 11124578889999985
Q ss_pred CCCCChhHHHHHhc-cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE-EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~-~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S 152 (152)
+ ++.+.+. ++|++|||||.... .+.++..+++|+.++..+.+.+.+ ..+.++||++|
T Consensus 64 ~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~S 131 (257)
T PRK09291 64 I------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTS 131 (257)
T ss_pred H------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 4 5776665 89999999996531 345667889999998887766543 12447888876
No 136
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.3e-13 Score=97.95 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=84.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
|++++||||+|+||.+++++|++.|+ +|++++|+.. ...+...++.. ....++.++.+|++++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~---~Vi~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl~~~ 63 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA---RLYLAARDVE--RLERLADDLRA------------RGAVAVSTHELDILDT 63 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC---EEEEEeCCHH--HHHHHHHHHHH------------hcCCeEEEEecCCCCh
Confidence 47899999999999999999999986 6788888643 11111111110 1125788999999986
Q ss_pred CCCCChhHHHHHhc----cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE----EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~----~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+ ++.++++ .+|++||++|.... .+++...+++|+.++.++++++.+. .+.+++|++|
T Consensus 64 ~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 134 (243)
T PRK07102 64 A------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS 134 (243)
T ss_pred H------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 5 4554443 56999999986431 3445568899999999999887642 2446787765
No 137
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.55 E-value=7.1e-14 Score=99.75 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=81.8
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+..+++++++||||+|+||++++++|++.|+ .|++.+|+... ..... . ......+.+
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~---~Vi~~~r~~~~-----~~~~~-~--------------~~~~~~~~~ 65 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGA---KVIGLTHSKIN-----NSESN-D--------------ESPNEWIKW 65 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEECCchh-----hhhhh-c--------------cCCCeEEEe
Confidence 4567889999999999999999999999986 67777876421 11100 0 011256788
Q ss_pred ccCCCCCCCChhHHHHHhccccEEEecccccc----chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 85 DILQANLGIKDSDLLMLQEEVSVVFNGAASLK----LEAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
|+++.+ ++...+.++|++|||||... ..+++...+++|+.++.++++++.+
T Consensus 66 D~~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 66 ECGKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eCCCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 998854 67777889999999999743 2466788999999999999998765
No 138
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2.1e-13 Score=97.96 Aligned_cols=123 Identities=19% Similarity=0.219 Sum_probs=86.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ +|++.+|+.. .+.+...++.. .....++.++.+|++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~D~~ 69 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGA---SVAICGRDEE--RLASAEARLRE-----------KFPGARLLAARCDVL 69 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh-----------hCCCceEEEEEecCC
Confidence 6789999999999999999999999986 6788888643 22222222111 001246778899999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.++ +.++|++|||||.... .+.+...+++|+.++..+.+++.+. .+.+++|+
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 143 (265)
T PRK07062 70 DEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVC 143 (265)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEE
Confidence 865 34333 3468999999996431 4467778999999998888877542 13457887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 144 is 145 (265)
T PRK07062 144 VN 145 (265)
T ss_pred ec
Confidence 65
No 139
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.54 E-value=8.7e-14 Score=99.56 Aligned_cols=118 Identities=16% Similarity=0.204 Sum_probs=84.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+.+++++||||+|+||.+++++|+++|+ +|++++|+.. ....+.. .....+.++.+|++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA---RVVIADIKPA------RARLAAL------------EIGPAAIAVSLDVT 62 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEcCCHH------HHHHHHH------------HhCCceEEEEccCC
Confidence 5678999999999999999999999986 6777777532 1111110 00135788899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v 149 (152)
+++ ++..++ .++|++||++|.... .+.++..+++|+.++.++++++.+. ....++|
T Consensus 63 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 136 (257)
T PRK07067 63 RQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKII 136 (257)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEE
Confidence 865 344333 368999999986531 4567778999999999999998642 1124687
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 137 ~~s 139 (257)
T PRK07067 137 NMA 139 (257)
T ss_pred EeC
Confidence 765
No 140
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.5e-13 Score=97.68 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=82.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ +|++++|+.. .+.+... ....++.++.+|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGA---RVAITGRDPA------SLEAARA------------ELGESALVIRADAG 62 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCHH------HHHHHHH------------HhCCceEEEEecCC
Confidence 5678999999999999999999999986 6777777532 1111110 01246778899998
Q ss_pred CCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862 88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~ 151 (152)
+.+.-.. .+.+.+...++|++||++|.... .+.+...+++|+.++.++++++.+. ....++|++
T Consensus 63 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~ 135 (249)
T PRK06500 63 DVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLN 135 (249)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 8541000 01122333478999999986432 3566778999999999999999752 122355544
No 141
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.54 E-value=1.4e-13 Score=98.48 Aligned_cols=125 Identities=9% Similarity=0.010 Sum_probs=84.6
Q ss_pred ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.+++++++||||+ ++||++++++|++.|+ +|++..|+. ...+.++++. ...+.++.+
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~---~Vi~~~r~~---~~~~~~~~~~---------------~~~~~~~~~ 62 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGA---TVIYTYQND---RMKKSLQKLV---------------DEEDLLVEC 62 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEecCch---HHHHHHHhhc---------------cCceeEEeC
Confidence 3678999999999 7999999999999986 677777742 2222222221 135678899
Q ss_pred ccCCCCCCCC-hhHHHHHhccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862 85 DILQANLGIK-DSDLLMLQEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI 151 (152)
Q Consensus 85 D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~ 151 (152)
|+++++.--. .+.+.+.+.++|++|||||... ..+.++..+++|+.++..+.+++.+. .+-.++|++
T Consensus 63 Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~i 142 (252)
T PRK06079 63 DVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTL 142 (252)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEE
Confidence 9998651000 1112222346899999999642 13567778999999999999888753 122467665
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 143 s 143 (252)
T PRK06079 143 T 143 (252)
T ss_pred e
Confidence 4
No 142
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.54 E-value=1.6e-13 Score=98.05 Aligned_cols=120 Identities=17% Similarity=0.091 Sum_probs=83.8
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
.++++||||+|+||++++++|++.|+ .|++++|+... ...+..+.+.. ...++.++.+|++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~---~vi~~~r~~~~-~~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 64 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGF---DLAINDRPDDE-ELAATQQELRA-------------LGVEVIFFPADVADL 64 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecCchh-HHHHHHHHHHh-------------cCCceEEEEecCCCH
Confidence 36899999999999999999999986 67777775431 11122222111 124688899999986
Q ss_pred CCCCChhHHHHH-------hccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc----CC-----
Q psy11862 90 NLGIKDSDLLML-------QEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM----KK----- 144 (152)
Q Consensus 90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~----- 144 (152)
. ++.++ +.++|++||++|... ..+.++..+++|+.++.++++++.+. .+
T Consensus 65 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 65 S------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 5 33333 246899999998642 13667778999999999998887542 11
Q ss_pred CcceEecC
Q psy11862 145 LVVSLDIG 152 (152)
Q Consensus 145 ~~~~v~~S 152 (152)
.++||++|
T Consensus 139 ~~~iv~~s 146 (256)
T PRK12745 139 HRSIVFVS 146 (256)
T ss_pred CcEEEEEC
Confidence 35678765
No 143
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2e-13 Score=97.49 Aligned_cols=119 Identities=18% Similarity=0.175 Sum_probs=83.9
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||+++++.|++.|+ .|++++|+.. ...+....+.. ...++.++.+|++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~---~Vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 62 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTKE--KLEEAKLEIEQ-------------FPGQVLTVQMDVRNP 62 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEecCCCH
Confidence 47899999999999999999999986 6788887632 11111111110 124688899999986
Q ss_pred CCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---C-CCcceEec
Q psy11862 90 NLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---K-KLVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~-~~~~~v~~ 151 (152)
+ ++.++ +.++|++||++|... ..+.+...+++|+.+++++++++.+. . ..++++++
T Consensus 63 ~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~i 136 (252)
T PRK07677 63 E------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINM 136 (252)
T ss_pred H------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 5 34333 346899999998532 14557779999999999999998542 1 23578876
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 137 s 137 (252)
T PRK07677 137 V 137 (252)
T ss_pred c
Confidence 5
No 144
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.54 E-value=3e-13 Score=95.80 Aligned_cols=122 Identities=20% Similarity=0.263 Sum_probs=85.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|++|+++++.|++.|+ .|+++.|+... ...+....+.. ...++.++.+|++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~---~v~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 65 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGA---NVVINYASSEA-GAEALVAEIGA-------------LGGKALAVQGDVS 65 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCchh-HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence 5678999999999999999999999987 56666665331 11111111111 1256888899998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+++ .++|++||++|.... .+.+...+.+|+.++.++++++.+. .+.++|++
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~ 139 (248)
T PRK05557 66 DAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIIN 139 (248)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 865 343333 368999999986432 3456678899999999999888753 13457887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 140 is 141 (248)
T PRK05557 140 IS 141 (248)
T ss_pred Ec
Confidence 75
No 145
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.54 E-value=3e-13 Score=96.73 Aligned_cols=119 Identities=13% Similarity=0.164 Sum_probs=84.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||.+++++|++.|+ .|+..++... .+..+.+.. ...++.++.+|++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~---~vv~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~Dl~ 67 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGC---DIVGINIVEP----TETIEQVTA-------------LGRRFLSLTADLR 67 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEecCcch----HHHHHHHHh-------------cCCeEEEEECCCC
Confidence 6789999999999999999999999987 5566555321 222222211 1246788899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v 149 (152)
+++ ++.+++ .++|++|||||.... .+++...+++|+.++.++++++.+. .+ ..++|
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv 141 (253)
T PRK08993 68 KID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKII 141 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 854 344333 368999999997531 4678889999999999999987642 11 25677
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 142 ~is 144 (253)
T PRK08993 142 NIA 144 (253)
T ss_pred EEC
Confidence 765
No 146
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.5e-13 Score=100.03 Aligned_cols=112 Identities=22% Similarity=0.205 Sum_probs=79.7
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC-------CCCHHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR-------GLTPKARLAEFSKLPVFERLRKECPAQLSRL 79 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (152)
.+++++++||||+++||.+++++|++.|+ +|++.+|+.. .....+...++.. ...++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~---~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-------------~~~~~ 66 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSASGGSAAQAVVDEIVA-------------AGGEA 66 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeeCCccccccccchhHHHHHHHHHHh-------------cCCce
Confidence 36789999999999999999999999986 5666666431 0111222222211 12467
Q ss_pred EEEEcccCCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHH
Q psy11862 80 HIIEGDILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIAL 140 (152)
Q Consensus 80 ~~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~ 140 (152)
.++.+|+++++ ++.++ +.++|++|||||... ..+.+...+++|+.+++.+.+++.
T Consensus 67 ~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 135 (286)
T PRK07791 67 VANGDDIADWD------GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA 135 (286)
T ss_pred EEEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 78899999865 33333 347899999999753 146678899999999999988875
No 147
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.54 E-value=1.9e-13 Score=98.14 Aligned_cols=120 Identities=10% Similarity=0.069 Sum_probs=83.4
Q ss_pred cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+++++++||||+ ++||.+++++|+++|+ +|++..|+.. ..+.+.++... .....++.+|
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~---~v~l~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~D 68 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGA---ELAVTYLNDK---ARPYVEPLAEE-------------LDAPIFLPLD 68 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCChh---hHHHHHHHHHh-------------hccceEEecC
Confidence 688999999998 5999999999999986 6677777532 12223322110 1234578899
Q ss_pred cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862 86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV 146 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ 146 (152)
+++++ ++.++ +.++|++|||||... ..+.++..+++|+.++..+.+++.+. ..-.
T Consensus 69 ~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g 142 (258)
T PRK07533 69 VREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG 142 (258)
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC
Confidence 99865 34333 346899999998642 13567889999999999999987653 1224
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
++|++|
T Consensus 143 ~Ii~is 148 (258)
T PRK07533 143 SLLTMS 148 (258)
T ss_pred EEEEEe
Confidence 666654
No 148
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.6e-13 Score=97.27 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=84.7
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
++++++||||+|++|.+++++|+++|+ +|++++|++. ...+....+. ....++.++.+|+++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~-------------~~~~~~~~~~~D~~~ 66 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW---DLALVARSQD--ALEALAAELR-------------STGVKAAAYSIDLSN 66 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHH-------------hCCCcEEEEEccCCC
Confidence 468999999999999999999999986 6788888642 1111111111 112468889999998
Q ss_pred CCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 89 ANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 89 ~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
++ ++..++ .++|++||++|.... .+.++..+++|+.++.++++++.+. .+.+++|++
T Consensus 67 ~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 140 (241)
T PRK07454 67 PE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV 140 (241)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 65 343333 368999999986431 3466778999999999988887431 234678877
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 141 s 141 (241)
T PRK07454 141 S 141 (241)
T ss_pred c
Confidence 5
No 149
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.3e-13 Score=97.10 Aligned_cols=128 Identities=16% Similarity=0.146 Sum_probs=81.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ .|++..++.. ....+...++.. ....+..+.+|++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~ 64 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRK-EEAEETVYEIQS-------------NGGSAFSIGANLE 64 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcCCCH-HHHHHHHHHHHh-------------cCCceEEEecccC
Confidence 4679999999999999999999999986 4555443211 111111111111 1245677889998
Q ss_pred CCCCCCC-hhHHHHH----h--ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 88 QANLGIK-DSDLLML----Q--EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~----~--~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
+.+.-.. .+++.+. + .++|++||+||.... .+.++.++++|+.+++.+++++.+. ....++|++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~is 144 (252)
T PRK12747 65 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINIS 144 (252)
T ss_pred CHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEEC
Confidence 8541000 0111111 1 268999999996431 3457788999999999999888753 1235788875
No 150
>PRK09242 tropinone reductase; Provisional
Probab=99.53 E-value=2.3e-13 Score=97.41 Aligned_cols=129 Identities=17% Similarity=0.157 Sum_probs=87.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|+++|+ +|++++|+.. ...+...++.. . ....++.++.+|++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dl~ 70 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGA---DVLIVARDAD--ALAQARDELAE---------E--FPEREVHGLAADVS 70 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh---------h--CCCCeEEEEECCCC
Confidence 6789999999999999999999999986 6788887532 22222222111 0 01246888999999
Q ss_pred CCCCCCC-hhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862 88 QANLGIK-DSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S 152 (152)
+++.-.. .+.+.+.+.++|++||++|... ..+++...+++|+.++..+++++.+ ..+.+++|++|
T Consensus 71 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~s 146 (257)
T PRK09242 71 DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIG 146 (257)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 8641000 1112233447899999999632 2466777899999999999988754 12346788875
No 151
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.53 E-value=2.7e-13 Score=96.17 Aligned_cols=121 Identities=23% Similarity=0.328 Sum_probs=84.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+.+++++||||+|+||+++++.|++.|+ +++++ +|+.. ...+....+.. ...++.++.+|+
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~---~v~~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~ 64 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGA---KVVIAYDINEE--AAQELLEEIKE-------------EGGDAIAVKADV 64 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCeEEEEECCC
Confidence 5578999999999999999999999986 55666 66532 11111111111 124688899999
Q ss_pred CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
++++ ++.+.+. ++|++||++|.... .+.++..+++|+.++.++++++... .+.+++|
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v 138 (247)
T PRK05565 65 SSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIV 138 (247)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9865 4444433 78999999997531 3456778999999999998887642 2345688
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 139 ~~s 141 (247)
T PRK05565 139 NIS 141 (247)
T ss_pred EEC
Confidence 765
No 152
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.53 E-value=2.3e-13 Score=97.30 Aligned_cols=121 Identities=16% Similarity=0.127 Sum_probs=84.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ .+++.+|+.. . .+.+..... ....++.++.+|++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~---~vv~~~r~~~--~-~~~~~~~l~------------~~~~~~~~~~~D~~ 70 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINAD--A-ANHVVDEIQ------------QLGGQAFACRCDIT 70 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHH--H-HHHHHHHHH------------hcCCcEEEEEccCC
Confidence 5789999999999999999999999986 5677776532 1 111111100 01246778899999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+.+ ++.++ +.++|++||++|.... .+.+...+++|+.++.++++++... .+..++|++
T Consensus 71 ~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 144 (255)
T PRK06113 71 SEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEE
Confidence 864 34333 2468999999996432 3566778999999999999998642 133578877
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 145 s 145 (255)
T PRK06113 145 T 145 (255)
T ss_pred e
Confidence 5
No 153
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.2e-13 Score=98.20 Aligned_cols=118 Identities=15% Similarity=0.118 Sum_probs=83.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|+||++++++|++.|+ +|++.+|+.. ...+....+.. ...++.++.+|+++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~~~~ 62 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW---RLALADVNEE--GGEETLKLLRE-------------AGGDGFYQRCDVRDYS 62 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEccCCCHH
Confidence 4799999999999999999999986 6777777543 22222222211 1256788999998854
Q ss_pred CCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S 152 (152)
++..++ .++|++||++|.... .+.++..+++|+.++..+.+.+.+ ..+.+++|++|
T Consensus 63 ------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vs 135 (270)
T PRK05650 63 ------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIA 135 (270)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 344333 368999999997532 356677899999999988777642 12456888775
No 154
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.5e-13 Score=98.17 Aligned_cols=123 Identities=20% Similarity=0.190 Sum_probs=85.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|++++++|||++|+||.++++.|+++|+ .|++++|+.. ...+....+.. . ....++.++.+|++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dl~ 68 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---AVMIVGRNPD--KLAAAAEEIEA---------L--KGAGAVRYEPADVT 68 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh---------c--cCCCceEEEEcCCC
Confidence 6789999999999999999999999987 6777887532 11111111110 0 01246788899998
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
+++ ++.++++ ++|++||++|... ..+.+...+++|+.++..+++++.+. .+.++|+
T Consensus 69 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (276)
T PRK05875 69 DED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFV 142 (276)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 864 4444433 6899999998542 13446678899999999998877542 1335788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 143 ~~s 145 (276)
T PRK05875 143 GIS 145 (276)
T ss_pred EEe
Confidence 765
No 155
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.53 E-value=3.1e-13 Score=98.65 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=86.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||++++++|+++|+ +|++.+|+... ..+.+..... ....++.++.+|+
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~---~V~l~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl 105 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA---DIAIVYLDEHE--DANETKQRVE------------KEGVKCLLIPGDV 105 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHHHHH------------hcCCeEEEEEccC
Confidence 45678999999999999999999999986 66777775431 1122211111 0124678899999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEe
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLD 150 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~ 150 (152)
++.+ ++..++ .++|++||+||.... .+.+...+++|+.++.++++++.+. ....++|+
T Consensus 106 ~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~ 179 (290)
T PRK06701 106 SDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIIN 179 (290)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEE
Confidence 8855 343333 368999999986421 3456778999999999999998753 12257887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 180 is 181 (290)
T PRK06701 180 TG 181 (290)
T ss_pred Ee
Confidence 65
No 156
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.53 E-value=3e-13 Score=95.95 Aligned_cols=122 Identities=17% Similarity=0.183 Sum_probs=87.3
Q ss_pred CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|+.+.+ +++++++|||++|++|.++++.|+++|+ +|++++|+.. .+.++.. .....
T Consensus 1 ~~~~~~-~~~~~~lItGa~g~iG~~~a~~l~~~g~---~V~~~~r~~~------~~~~~~~--------------~~~~~ 56 (245)
T PRK07060 1 MNMAFD-FSGKSVLVTGASSGIGRACAVALAQRGA---RVVAAARNAA------ALDRLAG--------------ETGCE 56 (245)
T ss_pred CCcccc-cCCCEEEEeCCcchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH--------------HhCCe
Confidence 555555 6789999999999999999999999986 6788887532 1211111 01345
Q ss_pred EEEcccCCCCCCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-Cc
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LV 146 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~ 146 (152)
++.+|+++.. ++.+.++ ++|++||++|.... ..+++..+.+|+.++..+++++.+. .+ .+
T Consensus 57 ~~~~D~~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 130 (245)
T PRK07060 57 PLRLDVGDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG 130 (245)
T ss_pred EEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence 6789998854 4555544 58999999997532 3456778899999999999988652 11 35
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
+||++|
T Consensus 131 ~iv~~s 136 (245)
T PRK07060 131 SIVNVS 136 (245)
T ss_pred EEEEEc
Confidence 788875
No 157
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.6e-13 Score=98.26 Aligned_cols=118 Identities=19% Similarity=0.213 Sum_probs=81.9
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.++++.|++.|+ +|++++|+.. .+.++.. .... ..++.++.+|++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~---~v~~~~r~~~------~~~~~~~---------~~~~-~~~~~~~~~Dl~~~ 62 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA---TLGLVARRTD------ALQAFAA---------RLPK-AARVSVYAADVRDA 62 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH---------hccc-CCeeEEEEcCCCCH
Confidence 47899999999999999999999986 6778887532 2221111 0011 12688899999986
Q ss_pred CCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+ ++.+++ ..+|++||++|.... .+.+...+++|+.++.+++++.... .+.+++|++
T Consensus 63 ~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~i 136 (257)
T PRK07024 63 D------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGI 136 (257)
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 5 444433 347999999996431 2456778999999999988865421 234677766
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 137 s 137 (257)
T PRK07024 137 A 137 (257)
T ss_pred e
Confidence 4
No 158
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.53 E-value=4.5e-13 Score=95.95 Aligned_cols=125 Identities=14% Similarity=0.155 Sum_probs=82.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
=++++++||||+|+||++++++|+++| + +|++.+|+... ...+..+++... ...++.++.+|+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~---~V~~~~r~~~~-~~~~~~~~l~~~------------~~~~v~~~~~D~ 69 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPA---RVVLAALPDDP-RRDAAVAQMKAA------------GASSVEVIDFDA 69 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCC---eEEEEeCCcch-hHHHHHHHHHhc------------CCCceEEEEecC
Confidence 367899999999999999999999985 4 77888886541 122222222111 123688999999
Q ss_pred CCCCCCCChhH-HHHHh--ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHH----HhcCCCcceEecC
Q psy11862 87 LQANLGIKDSD-LLMLQ--EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIA----LKMKKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~-~~~~~--~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~S 152 (152)
++++. .++ ++... .++|++||++|.... ..+..+.+++|+.++..+.+.+ .+. +.++||++|
T Consensus 70 ~~~~~---~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~is 145 (253)
T PRK07904 70 LDTDS---HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMS 145 (253)
T ss_pred CChHH---HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEe
Confidence 88651 111 22222 379999999987532 1122346899999988865554 333 457888875
No 159
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.2e-13 Score=96.64 Aligned_cols=122 Identities=17% Similarity=0.212 Sum_probs=84.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|+++|+ ++++..|+.. ....+..+++.. ...++.++.+|++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 65 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF---AVAVNYAGSA-AAADELVAEIEA-------------AGGRAIAVQADVA 65 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCCH-HHHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence 4678999999999999999999999987 4555555432 111111122111 1256888999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
+++ ++.+.+ .++|++||+||... ..+.++..+++|+.++.++++++.+. ...+++|++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 139 (245)
T PRK12937 66 DAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLS 139 (245)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEe
Confidence 854 444444 36899999999653 14567778999999999999888653 1224777765
No 160
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.52 E-value=2.7e-13 Score=95.59 Aligned_cols=110 Identities=19% Similarity=0.145 Sum_probs=81.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|++++++||||+|++|.+++++|++.|+ +|++++|+.... ....++.+|++
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~---~v~~~~r~~~~~--------------------------~~~~~~~~D~~ 51 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAIDD--------------------------FPGELFACDLA 51 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCcccc--------------------------cCceEEEeeCC
Confidence 3568999999999999999999999986 778888865310 11246789998
Q ss_pred CCCCCCChhHHHHHhc------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 88 QANLGIKDSDLLMLQE------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+++ ++.+.+. ++|++||++|.... .+.+...+++|+.++.++.+++.+. .+.+++|++
T Consensus 52 ~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 125 (234)
T PRK07577 52 DIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNI 125 (234)
T ss_pred CHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 864 3444443 68999999997542 3456668999999999988877541 245688877
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 126 s 126 (234)
T PRK07577 126 C 126 (234)
T ss_pred c
Confidence 5
No 161
>PRK05865 hypothetical protein; Provisional
Probab=99.52 E-value=1.2e-13 Score=112.27 Aligned_cols=102 Identities=23% Similarity=0.173 Sum_probs=82.6
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|+||++++++|++.|+ .|++++|+.... ....+.++.+|+.+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~---~Vv~l~R~~~~~------------------------~~~~v~~v~gDL~D~~ 53 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH---EVVGIARHRPDS------------------------WPSSADFIAADIRDAT 53 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCchhh------------------------cccCceEEEeeCCCHH
Confidence 4799999999999999999999987 677788753210 0135678899998854
Q ss_pred CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.++++++|+|||+|+.... .+++|+.++.++++++.+. ++++||++|
T Consensus 54 ------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iS 102 (854)
T PRK05865 54 ------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTS 102 (854)
T ss_pred ------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEEC
Confidence 688888899999999986431 4688999999999999987 678999987
No 162
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.52 E-value=1.2e-13 Score=98.75 Aligned_cols=119 Identities=19% Similarity=0.171 Sum_probs=86.3
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.+...+++++||||+|++|++++++|++.|+ .|+++.|+... ...... ...++.++.+
T Consensus 12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~---~V~~~~R~~~~------~~~~~~-------------~~~~~~~~~~ 69 (251)
T PLN00141 12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGF---AVKAGVRDVDK------AKTSLP-------------QDPSLQIVRA 69 (251)
T ss_pred cccccCCeEEEECCCcHHHHHHHHHHHhCCC---EEEEEecCHHH------HHHhcc-------------cCCceEEEEe
Confidence 3456788999999999999999999999987 67788876431 111100 0246888999
Q ss_pred ccCCCCCCCChhHHHHHh-ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 85 DILQANLGIKDSDLLMLQ-EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~~-~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
|+++.. .++.+.+ .++|+||+++|...... ....+++|+.++.++++++.+. +.++||++|
T Consensus 70 Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~-~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iS 131 (251)
T PLN00141 70 DVTEGS-----DKLVEAIGDDSDAVICATGFRRSFD-PFAPWKVDNFGTVNLVEACRKA-GVTRFILVS 131 (251)
T ss_pred eCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCC-CCCceeeehHHHHHHHHHHHHc-CCCEEEEEc
Confidence 998742 2466666 58999999988643211 2223578888999999999886 678999986
No 163
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.52 E-value=3.1e-13 Score=96.99 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=84.0
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
...+++++++||||+++||++++++|++.|+ .|++..|+.. ..+.+....+.. ....++.++.+
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~ 66 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGV---NIAFTYNSNV-EEANKIAEDLEQ------------KYGIKAKAYPL 66 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH-HHHHHHHHHHHH------------hcCCceEEEEc
Confidence 3457899999999999999999999999986 5565554321 111111111111 01257889999
Q ss_pred ccCCCCCCCChhHHHHH-------hccccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHHhc--
Q psy11862 85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIALKM-- 142 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~-- 142 (152)
|+++++ ++.++ +.++|++|||||... ....+...+++|+.+...+.+.+.+.
T Consensus 67 D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 140 (260)
T PRK08416 67 NILEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRME 140 (260)
T ss_pred CCCCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhh
Confidence 999865 34333 346899999997531 13456668899999888877776542
Q ss_pred -CCCcceEecC
Q psy11862 143 -KKLVVSLDIG 152 (152)
Q Consensus 143 -~~~~~~v~~S 152 (152)
.+.+++|++|
T Consensus 141 ~~~~g~iv~is 151 (260)
T PRK08416 141 KVGGGSIISLS 151 (260)
T ss_pred ccCCEEEEEEe
Confidence 1335788775
No 164
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.52 E-value=1.5e-13 Score=98.74 Aligned_cols=124 Identities=18% Similarity=0.216 Sum_probs=83.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ +|++++|+.. .++++.. ....++..+.+|++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~l~~------------~~~~~~~~~~~D~~ 61 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGA---RVAVLDKSAA------GLQELEA------------AHGDAVVGVEGDVR 61 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHh------------hcCCceEEEEeccC
Confidence 5689999999999999999999999996 6777777532 2222211 01245778899998
Q ss_pred CCCCCCC-hhHHHHHhccccEEEeccccccc-------h-----hhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------E-----AELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~-----~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
+.+.-.. .+++.+.+.++|++|||||.... + +.++..+++|+.++..+++++.+. ...+++|++|
T Consensus 62 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~s 141 (262)
T TIGR03325 62 SLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTI 141 (262)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 8541000 01122223478999999986321 1 257788999999999999998753 1224666653
No 165
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4e-13 Score=95.80 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=84.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ +|++++|+.. ...+..+++.. ....+.++.+|++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~---~Vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~ 67 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKLD--GCQAVADAIVA-------------AGGKAEALACHIG 67 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCCC
Confidence 6789999999999999999999999986 6788887532 22222222111 1245778899998
Q ss_pred CCCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
+.+ ++..+ +.++|++||++|... ..+.+...+++|+.++..+++++.+. .+.++++
T Consensus 68 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 141 (252)
T PRK07035 68 EME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIV 141 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEE
Confidence 864 33333 346899999998532 14556678999999999988887532 2346777
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 142 ~~s 144 (252)
T PRK07035 142 NVA 144 (252)
T ss_pred EEC
Confidence 765
No 166
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3.1e-13 Score=96.96 Aligned_cols=119 Identities=16% Similarity=0.191 Sum_probs=82.9
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.++++.|++.|+ +|++++|+.. ...+..+.+.. ....+.++.+|++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~---~Vi~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~ 62 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA---QLVLAARNET--RLASLAQELAD-------------HGGEALVVPTDVSDA 62 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCCCH
Confidence 46899999999999999999999986 6778887532 11221222111 124688889999986
Q ss_pred CCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
+ ++..++ .++|++||++|.... .+.+.+.+++|+.++.++++.+.+. .+.+++|++|
T Consensus 63 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~s 136 (263)
T PRK06181 63 E------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVS 136 (263)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 5 344443 368999999986432 2335667999999999999998642 1335777654
No 167
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.51 E-value=5.9e-13 Score=94.75 Aligned_cols=131 Identities=19% Similarity=0.135 Sum_probs=85.9
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.+.+++++++|||++|+||.+++++|++.|+ .|++++|+.. ...+...++.. ....++.++.+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~ 69 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEE--KLEAVYDEIEA------------AGGPQPAIIPL 69 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCHH--HHHHHHHHHHh------------cCCCCceEEEe
Confidence 3467899999999999999999999999986 6788888642 11111111111 01235667778
Q ss_pred ccCCCCC-CCC--hhHHHHHhccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862 85 DILQANL-GIK--DSDLLMLQEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD 150 (152)
Q Consensus 85 D~~~~~~-~~~--~~~~~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~ 150 (152)
|+++... .+. .+.+.+.+.++|++||+||.... .+.+...+++|+.++.++++++.+ ..+.++||+
T Consensus 70 d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~ 149 (247)
T PRK08945 70 DLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVF 149 (247)
T ss_pred cccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 8864220 000 01233333478999999986421 356777899999999999888753 124568887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 150 ~s 151 (247)
T PRK08945 150 TS 151 (247)
T ss_pred Ec
Confidence 65
No 168
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.51 E-value=3.9e-13 Score=96.26 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=78.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC-C-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR-G-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+++++++||||+|+||.++++.|++.|+ +++++.++.. . ....+..+.+.. ...++.++.+|
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~---~vv~i~~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~~~D 69 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGA---KAVAIHYNSAASKADAEETVAAVKA-------------AGAKAVAFQAD 69 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC---cEEEEecCCccchHHHHHHHHHHHH-------------hCCcEEEEecC
Confidence 5679999999999999999999999987 4445554322 1 111111111111 12467889999
Q ss_pred cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
+++++ ++.+++ .++|++||+||... ..+.+...+++|+.++..+++++.+
T Consensus 70 ~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 133 (257)
T PRK12744 70 LTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR 133 (257)
T ss_pred cCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99865 444433 36899999999632 1445777899999999999999875
No 169
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.51 E-value=4.8e-13 Score=94.43 Aligned_cols=113 Identities=19% Similarity=0.208 Sum_probs=85.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||.++++.|++.|+ .|++++|+.... ...++.++.+|++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~~------------------------~~~~~~~~~~D~~ 55 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGA---QVYGVDKQDKPD------------------------LSGNFHFLQLDLS 55 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCC---EEEEEeCCcccc------------------------cCCcEEEEECChH
Confidence 5678999999999999999999999986 677777754311 0145778899998
Q ss_pred CCCCCCChhHHHHHhccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
++ .+++.+.+.++|++||++|... ..++++..+++|+.++.++++++.+. .+.+++|++|
T Consensus 56 ~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 126 (235)
T PRK06550 56 DD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMC 126 (235)
T ss_pred HH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 75 2345555678999999998532 14567778999999999999988642 2345788765
No 170
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.51 E-value=7.8e-13 Score=97.23 Aligned_cols=129 Identities=18% Similarity=0.150 Sum_probs=85.3
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC----HHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT----PKARLAEFSKLPVFERLRKECPAQLSRLHI 81 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
..+++++++||||+++||.+++++|++.|+ +|++.+|+..... ..+.+..... .+ .....++.+
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~-----~l----~~~~~~~~~ 71 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGA---TVYVTGRSTRARRSEYDRPETIEETAE-----LV----TAAGGRGIA 71 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecccccccccccccchHHHHHH-----HH----HhcCCceEE
Confidence 347889999999999999999999999986 6777888642110 0111111100 00 011245778
Q ss_pred EEcccCCCCCCCChhHHHHH-------hccccEEEecc-ccc------c-----chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 82 IEGDILQANLGIKDSDLLML-------QEEVSVVFNGA-ASL------K-----LEAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 82 ~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a-~~~------~-----~~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
+.+|+++++ ++.++ +.++|++|||| |.. . ..+.+.+.+++|+.+++.+.+++.+.
T Consensus 72 ~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~ 145 (305)
T PRK08303 72 VQVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPL 145 (305)
T ss_pred EEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 899999865 34333 34689999999 632 1 13456678899999999988887652
Q ss_pred ---CCCcceEecC
Q psy11862 143 ---KKLVVSLDIG 152 (152)
Q Consensus 143 ---~~~~~~v~~S 152 (152)
.+..++|++|
T Consensus 146 m~~~~~g~IV~is 158 (305)
T PRK08303 146 LIRRPGGLVVEIT 158 (305)
T ss_pred hhhCCCcEEEEEC
Confidence 1235777764
No 171
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.51 E-value=5.3e-13 Score=95.66 Aligned_cols=121 Identities=18% Similarity=0.217 Sum_probs=84.7
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
..+++++++||||+|++|++++++|+++|+ .|++++|+.. . .+.+.... . ..++.++.+|
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~---~V~~~~r~~~--~-~~~~~~~~------------~--~~~~~~~~~D 66 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA---RVHVCDVSEA--A-LAATAARL------------P--GAKVTATVAD 66 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHH------------h--cCceEEEEcc
Confidence 347789999999999999999999999987 6788888543 1 11111110 0 1256888999
Q ss_pred cCCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-c
Q psy11862 86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKL-V 146 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~ 146 (152)
+++++ ++..++ .++|+|||++|... ..+.+...+++|+.++..+++++.+. .+. +
T Consensus 67 ~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T PRK12829 67 VADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGG 140 (264)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCe
Confidence 99865 344333 47899999999762 14566788999999999998887431 123 4
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
+++++|
T Consensus 141 ~vv~~s 146 (264)
T PRK12829 141 VIIALS 146 (264)
T ss_pred EEEEec
Confidence 566654
No 172
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4.9e-13 Score=96.64 Aligned_cols=113 Identities=15% Similarity=0.210 Sum_probs=81.1
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|++|.++++.|++.|+ .|++++|+.. .+..+.. ..+.++.+|++++
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~---------------~~~~~~~~Dl~~~ 56 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGY---EVWATARKAE------DVEALAA---------------AGFTAVQLDVNDG 56 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH---------------CCCeEEEeeCCCH
Confidence 47899999999999999999999986 6788887532 1222111 2456788999885
Q ss_pred CCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
+ ++.+++ .++|++||+||... ..+.+...+++|+.++.++++++.+. .+.+++|++|
T Consensus 57 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~is 129 (274)
T PRK05693 57 A------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIG 129 (274)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 4 344333 46899999999643 13567778999999999999987542 1235677654
No 173
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.51 E-value=3.6e-13 Score=96.71 Aligned_cols=120 Identities=18% Similarity=0.275 Sum_probs=84.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|+++|+ .|++++|+.. ...+...++ . ...++.++.+|++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~-~-------------~~~~~~~~~~D~~ 63 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGA---RLLLVGRNAE--KLEALAARL-P-------------YPGRHRWVVADLT 63 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHH-h-------------cCCceEEEEccCC
Confidence 4678999999999999999999999986 6788888532 111111111 0 1257888999999
Q ss_pred CCCCCCChhHHHHH------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 88 QANLGIKDSDLLML------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+++ ++..+ ..++|++||+||.... .+.++..+++|+.++.++++.+.+. .+.+++|++
T Consensus 64 d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 137 (263)
T PRK09072 64 SEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNV 137 (263)
T ss_pred CHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 865 33333 2468999999997532 3456778999999999999888642 123566665
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 138 s 138 (263)
T PRK09072 138 G 138 (263)
T ss_pred c
Confidence 4
No 174
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.51 E-value=3.3e-13 Score=99.22 Aligned_cols=112 Identities=22% Similarity=0.176 Sum_probs=80.9
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
..+++++++||||+|+||++++++|+++|+ +|++.++.... ...+..+++.. ...++.++.+|
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~~~~-~~~~~~~~i~~-------------~g~~~~~~~~D 70 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVASAL-DASDVLDEIRA-------------AGAKAVAVAGD 70 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCchh-HHHHHHHHHHh-------------cCCeEEEEeCC
Confidence 347889999999999999999999999986 66666664221 11222222211 13568889999
Q ss_pred cCCCCCCCChhHHHHH------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH
Q psy11862 86 ILQANLGIKDSDLLML------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL 140 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~ 140 (152)
+++++ ++.++ +.++|++|||||.... .++++..+++|+.++.++++++.
T Consensus 71 v~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~ 132 (306)
T PRK07792 71 ISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAA 132 (306)
T ss_pred CCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99865 33333 3578999999997542 45677789999999999998875
No 175
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.51 E-value=3.7e-13 Score=96.64 Aligned_cols=123 Identities=11% Similarity=0.081 Sum_probs=84.7
Q ss_pred cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+++++++||||+ ++||++++++|++.|+ +|++..|+.......+.++++... .....++.+|
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~---~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D 67 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGA---ELGITYLPDEKGRFEKKVRELTEP-------------LNPSLFLPCD 67 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEEecCcccchHHHHHHHHHhc-------------cCcceEeecC
Confidence 578999999986 8999999999999997 555555543322233334333211 1346678899
Q ss_pred cCCCCCCCChhHHHHH-------hccccEEEecccccc-------c----hhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862 86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------L----EAELKENVAANTRGTQRLLDIALKM-KKLV 146 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ 146 (152)
+++++ ++.++ +.++|++|||||... . .+.|+..+++|+.++..+.+++.+. ..-+
T Consensus 68 l~d~~------~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g 141 (258)
T PRK07370 68 VQDDA------QIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG 141 (258)
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC
Confidence 99865 34333 346899999999642 1 3567778999999999999987652 1225
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
++|++|
T Consensus 142 ~Iv~is 147 (258)
T PRK07370 142 SIVTLT 147 (258)
T ss_pred eEEEEe
Confidence 777764
No 176
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.51 E-value=3.4e-13 Score=95.92 Aligned_cols=121 Identities=12% Similarity=0.061 Sum_probs=83.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||++++++|+++|+ +|++.+|+.. ...+....+.. ......+.++.+|++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~D~~~~ 65 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRTD--RLEELKAELLA-----------RYPGIKVAVAALDVNDH 65 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-----------hCCCceEEEEEcCCCCH
Confidence 57899999999999999999999985 6778888642 11111111110 00124688899999986
Q ss_pred CCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 90 NLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+ ++.++ +.++|++||+||.... .+.+...+++|+.++..+++++.+. .+.+++|++|
T Consensus 66 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (248)
T PRK08251 66 D------QVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLIS 139 (248)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 4 34333 3478999999986532 3445668899999999998887531 2456788765
No 177
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4.5e-13 Score=95.11 Aligned_cols=115 Identities=15% Similarity=0.061 Sum_probs=83.0
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.+++++|+++|+ +|++++|++. .++++... ..++.++.+|++++
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~---~V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~~~ 58 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGW---QVIACGRNQS------VLDELHTQ-------------SANIFTLAFDVTDH 58 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCC---EEEEEECCHH------HHHHHHHh-------------cCCCeEEEeeCCCH
Confidence 36899999999999999999999986 6788888532 22222111 14577889999985
Q ss_pred CCCCChhHHHHHhc----cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE----EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~----~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
+ ++.++++ .+|.++|++|... ..+.++.++++|+.++.++++++.+. .+.+++|++|
T Consensus 59 ~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~is 127 (240)
T PRK06101 59 P------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVG 127 (240)
T ss_pred H------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEe
Confidence 4 5666655 3689999998532 13456778999999999999998763 1234677654
No 178
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.50 E-value=3.2e-13 Score=97.82 Aligned_cols=120 Identities=11% Similarity=0.101 Sum_probs=84.1
Q ss_pred cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+++|+++||||+ ++||+++++.|++.|+ +|++..|+. ...+.++++... . ... ..+.+|
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~---~Vil~~r~~---~~~~~~~~~~~~---------~---~~~-~~~~~D 63 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA---ELAFTYLNE---ALKKRVEPIAQE---------L---GSD-YVYELD 63 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEecCH---HHHHHHHHHHHh---------c---CCc-eEEEec
Confidence 568999999997 8999999999999986 667777752 122333332110 0 122 568899
Q ss_pred cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862 86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV 146 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ 146 (152)
++|++ ++.++ +.++|++|||||... ..+.++..+++|+.+++.+.+++.+. ..-.
T Consensus 64 v~d~~------~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g 137 (274)
T PRK08415 64 VSKPE------HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA 137 (274)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Confidence 99965 33333 346899999999642 14567889999999999999988753 1225
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
++|++|
T Consensus 138 ~Iv~is 143 (274)
T PRK08415 138 SVLTLS 143 (274)
T ss_pred cEEEEe
Confidence 777765
No 179
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.50 E-value=2.5e-13 Score=97.55 Aligned_cols=118 Identities=20% Similarity=0.238 Sum_probs=82.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||.+++++|++.|+ .|++.+|+.. .++.+.. ....++.++.+|++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGA---RVAVLERSAE------KLASLRQ------------RFGDHVLVVEGDVT 62 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH------------HhCCcceEEEccCC
Confidence 5789999999999999999999999987 5777887532 1222111 01245778899999
Q ss_pred CCCCCCChhHHHHH-------hccccEEEeccccccc--------hh----hHHHHHHhhhHHHHHHHHHHHhc--CCCc
Q psy11862 88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL--------EA----ELKENVAANTRGTQRLLDIALKM--KKLV 146 (152)
Q Consensus 88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~----~~~~~~~~n~~~~~~l~~~~~~~--~~~~ 146 (152)
+++ ++..+ +.++|++||+||.... .+ .++.++++|+.++..+++++.+. ....
T Consensus 63 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g 136 (263)
T PRK06200 63 SYA------DNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGG 136 (263)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCC
Confidence 864 33333 3468999999996421 11 26678899999999999888642 1224
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
++|++|
T Consensus 137 ~iv~~s 142 (263)
T PRK06200 137 SMIFTL 142 (263)
T ss_pred EEEEEC
Confidence 677664
No 180
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.50 E-value=5.4e-13 Score=95.06 Aligned_cols=112 Identities=19% Similarity=0.285 Sum_probs=84.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||++++++|+++|+ +|++++|+. +.. ...++.++.+|++
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~---~v~~~~~~~--------~~~----------------~~~~~~~~~~D~~ 58 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA---KVIGFDQAF--------LTQ----------------EDYPFATFVLDVS 58 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecch--------hhh----------------cCCceEEEEecCC
Confidence 6789999999999999999999999986 677777753 000 1246788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
+++ ++.+.+ .++|++||++|.... .+.+...+++|+.++..+++++.+. .+.+++|+
T Consensus 59 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 132 (252)
T PRK08220 59 DAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVT 132 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 865 444443 358999999997542 3567778999999999999988642 23457877
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 133 ~s 134 (252)
T PRK08220 133 VG 134 (252)
T ss_pred EC
Confidence 65
No 181
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.50 E-value=3.4e-13 Score=96.42 Aligned_cols=115 Identities=20% Similarity=0.246 Sum_probs=81.6
Q ss_pred CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|+.+.+ +++++++||||+|+||++++++|+++|+ +|+++.|+.. .+.+....+.. ...++.
T Consensus 1 ~~~~~~-~~~k~ilItGasg~IG~~~a~~l~~~G~---~Vi~~~r~~~--~~~~~~~~l~~-------------~~~~~~ 61 (258)
T PRK06949 1 MGRSIN-LEGKVALVTGASSGLGARFAQVLAQAGA---KVVLASRRVE--RLKELRAEIEA-------------EGGAAH 61 (258)
T ss_pred CCcccC-CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEE
Confidence 444444 6789999999999999999999999986 6788887532 11111111100 124678
Q ss_pred EEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL 140 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~ 140 (152)
++.+|+++++ ++.+.+ .++|++||++|.... ...+..++++|+.++..+.+++.
T Consensus 62 ~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (258)
T PRK06949 62 VVSLDVTDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVA 129 (258)
T ss_pred EEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 8999998854 444443 368999999996431 34577789999999999988875
No 182
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.50 E-value=8.1e-13 Score=94.66 Aligned_cols=121 Identities=19% Similarity=0.213 Sum_probs=81.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
..+++++||||+|+||+++++.|++.|+ .++++.++.. ....+....+.. ...++.++.+|++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~ 69 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGF---DVAVHYNRSR-DEAEALAAEIRA-------------LGRRAVALQADLA 69 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHh-------------cCCeEEEEEcCCC
Confidence 4578999999999999999999999986 5555555321 111111111110 1246788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD 150 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~ 150 (152)
|.+ ++.+++ .++|++||+||.... .+.++.++++|+.++..+++++.+. ...+++|+
T Consensus 70 d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (258)
T PRK09134 70 DEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVN 143 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 865 344433 358999999986431 3567778999999999999988653 12245555
Q ss_pred c
Q psy11862 151 I 151 (152)
Q Consensus 151 ~ 151 (152)
+
T Consensus 144 ~ 144 (258)
T PRK09134 144 M 144 (258)
T ss_pred E
Confidence 4
No 183
>PLN02778 3,5-epimerase/4-reductase
Probab=99.50 E-value=2.2e-13 Score=99.86 Aligned_cols=93 Identities=25% Similarity=0.234 Sum_probs=67.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
.|+++||||+||||++++++|+++|++ |.... .|+.+.
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~---V~~~~---------------------------------------~~~~~~ 46 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGID---FHYGS---------------------------------------GRLENR 46 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCE---EEEec---------------------------------------CccCCH
Confidence 468999999999999999999999874 33221 122221
Q ss_pred CCCCChhHHHHHhc--cccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
. .+...+. ++|+|||+||..+. ..+....+++|+.++.+++++|.+. +++++++.
T Consensus 47 ~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~~v~~s 109 (298)
T PLN02778 47 A------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLVLTNYA 109 (298)
T ss_pred H------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence 1 2333333 68999999997642 2355678999999999999999987 67655543
No 184
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.50 E-value=8e-13 Score=94.83 Aligned_cols=124 Identities=18% Similarity=0.206 Sum_probs=82.9
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
..+++++++||||+|+||.+++++|+++|+ .+++..|+.. ....+...++.. ...++.++.+|
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~---~vvi~~~~~~-~~~~~~~~~l~~-------------~~~~~~~~~~D 65 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKA---KVVINYRSDE-EEANDVAEEIKK-------------AGGEAIAVKGD 65 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHH-------------cCCeEEEEEec
Confidence 347889999999999999999999999986 5566666432 111111111111 12467788999
Q ss_pred cCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH----hcCCCcc
Q psy11862 86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL----KMKKLVV 147 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~ 147 (152)
+++++ ++.+++ .++|++||++|.... .+.++..+++|+.++..+.+.+. +.+..++
T Consensus 66 l~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~ 139 (261)
T PRK08936 66 VTVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGN 139 (261)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 99865 344333 368999999996432 35567789999999887766653 3212357
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 140 iv~~s 144 (261)
T PRK08936 140 IINMS 144 (261)
T ss_pred EEEEc
Confidence 77764
No 185
>PRK12743 oxidoreductase; Provisional
Probab=99.50 E-value=5.7e-13 Score=95.39 Aligned_cols=126 Identities=17% Similarity=0.120 Sum_probs=83.1
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||++++++|+++|+ +|+++.++.. ....+....+.. ....+.++.+|++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~---~V~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~ 64 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF---DIGITWHSDE-EGAKETAEEVRS-------------HGVRAEIRQLDLSDL 64 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCCh-HHHHHHHHHHHh-------------cCCceEEEEccCCCH
Confidence 57999999999999999999999997 5566554322 111111111111 135788899999986
Q ss_pred CCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEecC
Q psy11862 90 NLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~S 152 (152)
+..-. .+++.+.+.++|++||++|.... .+.+...+++|+.++..+++++.+. ++.+++|++|
T Consensus 65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~is 139 (256)
T PRK12743 65 PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINIT 139 (256)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 51000 11122223468999999996431 4567778999999999999887642 1235788775
No 186
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.50 E-value=4.2e-13 Score=94.10 Aligned_cols=115 Identities=17% Similarity=0.218 Sum_probs=80.3
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.+|+++||||+|++|+++++.|+++ + +|++++|+.. .+..+.. ....+.++.+|+++
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~------~~~~~~~-------------~~~~~~~~~~D~~~ 58 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAE------RLDELAA-------------ELPGATPFPVDLTD 58 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHH------HHHHHHH-------------HhccceEEecCCCC
Confidence 3579999999999999999999988 6 5788888532 1111110 01357788999998
Q ss_pred CCCCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
++ ++.+++. ++|++||++|.... .+.+...++.|+.++..+.+.+.+. ...+++|++|
T Consensus 59 ~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~s 128 (227)
T PRK08219 59 PE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFIN 128 (227)
T ss_pred HH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence 54 5666665 69999999997532 3456677899999977666665431 1235777765
No 187
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.50 E-value=9.3e-13 Score=93.29 Aligned_cols=127 Identities=13% Similarity=0.135 Sum_probs=83.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|++++++||||+|++|.++++.|+++|+ .|++++|+.. ...+...++... ......++.+|++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~~------------~~~~~~~~~~D~~ 66 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQK--KLEKVYDAIVEA------------GHPEPFAIRFDLM 66 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCChH--HHHHHHHHHHHc------------CCCCcceEEeeec
Confidence 6678999999999999999999999986 6788888653 222222222110 1134567788987
Q ss_pred CCCCCCChh----HHHHHh-ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 88 QANLGIKDS----DLLMLQ-EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~----~~~~~~-~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
+... -..+ .+.+.+ ..+|++||+||... ..+++...+++|+.++.++++++.+. .+..+++++
T Consensus 67 ~~~~-~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ 145 (239)
T PRK08703 67 SAEE-KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFV 145 (239)
T ss_pred ccch-HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 6320 0011 122223 46899999999632 13456668999999999998888542 134577765
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 146 s 146 (239)
T PRK08703 146 G 146 (239)
T ss_pred e
Confidence 4
No 188
>PRK09135 pteridine reductase; Provisional
Probab=99.49 E-value=5.9e-13 Score=94.50 Aligned_cols=112 Identities=21% Similarity=0.232 Sum_probs=79.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|++|++++++|++.|+ +|++++|+.. +..+.+..... ......+.++.+|++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~Dl~ 67 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGY---RVAIHYHRSA--AEADALAAELN-----------ALRPGSAAALQADLL 67 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH--HHHHHHHHHHH-----------hhcCCceEEEEcCCC
Confidence 4568999999999999999999999986 6777787532 11122211100 001245788999999
Q ss_pred CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
+++ ++.++++ ++|+|||++|... ..+.++.++++|+.++.++++++.+
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 129 (249)
T PRK09135 68 DPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP 129 (249)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence 855 4544443 5799999999642 1345677899999999999999864
No 189
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.49 E-value=4.2e-13 Score=96.07 Aligned_cols=121 Identities=14% Similarity=0.076 Sum_probs=83.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.++++.|++.|+ .|++++|+.. ...+....+... ....++.++.+|++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~---~vi~~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~ 65 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY---RVAVADINSE--KAANVAQEINAE-----------YGEGMAYGFGADATSE 65 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHHh-----------cCCceeEEEEccCCCH
Confidence 57899999999999999999999986 6777787543 111111111110 0013588999999985
Q ss_pred CCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceEec
Q psy11862 90 NLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~ 151 (152)
+ ++..+ +.++|++||+||... ..+.+...+++|+.++..+++++.+. .+ ..++|++
T Consensus 66 ~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ 139 (259)
T PRK12384 66 Q------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQI 139 (259)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence 4 33333 346899999998643 24567778999999999888887642 23 3577776
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 140 s 140 (259)
T PRK12384 140 N 140 (259)
T ss_pred c
Confidence 4
No 190
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=7e-13 Score=94.45 Aligned_cols=119 Identities=17% Similarity=0.271 Sum_probs=81.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|+++|+ +|++..++.. +....+.. . ...++.++.+|++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~---~vv~~~~~~~-----~~~~~~~~---------~---~~~~~~~~~~D~~ 62 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGA---RVVVNYHQSE-----DAAEALAD---------E---LGDRAIALQADVT 62 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC---eEEEEcCCCH-----HHHHHHHH---------H---hCCceEEEEcCCC
Confidence 4568999999999999999999999987 4555444321 11111110 0 0146788899998
Q ss_pred CCCCCCChhHHHHHhc-------c-ccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862 88 QANLGIKDSDLLMLQE-------E-VSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIALKM---K 143 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~-~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~---~ 143 (152)
+++ ++..+++ + +|++||+||... ..+.+...+++|+.++.++++++.+. .
T Consensus 63 ~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (253)
T PRK08642 63 DRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ 136 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc
Confidence 855 3444332 3 899999998521 13456678999999999999998642 2
Q ss_pred CCcceEecC
Q psy11862 144 KLVVSLDIG 152 (152)
Q Consensus 144 ~~~~~v~~S 152 (152)
+..++|++|
T Consensus 137 ~~g~iv~is 145 (253)
T PRK08642 137 GFGRIINIG 145 (253)
T ss_pred CCeEEEEEC
Confidence 346788764
No 191
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.49 E-value=1.2e-12 Score=94.04 Aligned_cols=122 Identities=10% Similarity=0.035 Sum_probs=84.0
Q ss_pred cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+++++++||||+ ++||.+++++|++.|+ +|++..|+... .+.++++... .. ..++.++.+|
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~---~v~~~~r~~~~---~~~~~~~~~~---------~~--~~~~~~~~~D 67 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA---KLVFTYAGERL---EKEVRELADT---------LE--GQESLLLPCD 67 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEecCcccc---hHHHHHHHHH---------cC--CCceEEEecC
Confidence 678999999997 8999999999999986 56777664321 2223222110 00 2467788999
Q ss_pred cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862 86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV 146 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ 146 (152)
++|++ ++.++ +.++|++|||||... ..+.+...+++|+.++..+.+++.+. ..-.
T Consensus 68 v~d~~------~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g 141 (257)
T PRK08594 68 VTSDE------EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG 141 (257)
T ss_pred CCCHH------HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc
Confidence 99865 33333 346899999998642 13456668899999999988887753 1225
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
++|++|
T Consensus 142 ~Iv~is 147 (257)
T PRK08594 142 SIVTLT 147 (257)
T ss_pred eEEEEc
Confidence 777765
No 192
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.49 E-value=4.4e-13 Score=101.60 Aligned_cols=107 Identities=21% Similarity=0.276 Sum_probs=81.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|++.|+ +|++++|++. ...+.... ...++..+.+|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~---~Vi~l~r~~~--~l~~~~~~----------------~~~~v~~v~~Dvs 234 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA---KVVALTSNSD--KITLEING----------------EDLPVKTLHWQVG 234 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHhh----------------cCCCeEEEEeeCC
Confidence 5789999999999999999999999986 6777777532 11111100 0134667889998
Q ss_pred CCCCCCChhHHHHHhccccEEEecccccc----chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLK----LEAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
+++ ++.+.++++|++|||||... ..++++..+++|+.++.++++++.+
T Consensus 235 d~~------~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 235 QEA------ALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CHH------HHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 854 67888889999999998653 2446778999999999999999864
No 193
>PRK08264 short chain dehydrogenase; Validated
Probab=99.49 E-value=8.5e-13 Score=93.34 Aligned_cols=115 Identities=21% Similarity=0.302 Sum_probs=85.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|++|+++++.|+++|+ .+|++++|+... +.+ ...++.++.+|++
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~------~~~----------------~~~~~~~~~~D~~ 59 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPES------VTD----------------LGPRVVPLQLDVT 59 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhh------hhh----------------cCCceEEEEecCC
Confidence 5678999999999999999999999986 367778876431 110 1256888999999
Q ss_pred CCCCCCChhHHHHHhc---cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQE---EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+++ ++.++++ .+|++||++|... ..+.+...+++|+.++.++++++.+. .+.++|+++|
T Consensus 60 ~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s 132 (238)
T PRK08264 60 DPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVL 132 (238)
T ss_pred CHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 865 4555544 6899999999722 24566778999999999999987642 2456788765
No 194
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.49 E-value=8.6e-13 Score=94.58 Aligned_cols=122 Identities=17% Similarity=0.198 Sum_probs=85.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|++|.++++.|++.|+ .|++++|+.. ...+...++.. ....++.++.+|++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~D~~ 67 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC---HLHLVARDAD--ALEALAADLRA------------AHGVDVAVHALDLS 67 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh------------hcCCceEEEEecCC
Confidence 5689999999999999999999999986 6788887542 11221111111 11246788899998
Q ss_pred CCCCCCChhHHHHH---hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 88 QANLGIKDSDLLML---QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~---~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+++ ++..+ +.++|++||++|... ..+.+...+++|+.++..+++++.+. .+.+++|++|
T Consensus 68 ~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (259)
T PRK06125 68 SPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVI 139 (259)
T ss_pred CHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 865 34443 357899999998643 14567888999999999998887532 1234677664
No 195
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.49 E-value=7.9e-13 Score=94.55 Aligned_cols=117 Identities=21% Similarity=0.248 Sum_probs=82.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.++++.|++.|+ .|++++|+.. ...+....+ . ..++.++.+|+.++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~---~v~~~~r~~~--~~~~~~~~~-~--------------~~~~~~~~~D~~~~ 61 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDAA--ALAAFADAL-G--------------DARFVPVACDLTDA 61 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh-c--------------CCceEEEEecCCCH
Confidence 57899999999999999999999986 6788887542 111111111 0 14678899999986
Q ss_pred CCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+ ++...+. ++|++||++|.... .+.+...+.+|+.++..+++++... .+.++|+++|
T Consensus 62 ~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 135 (257)
T PRK07074 62 A------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIG 135 (257)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEc
Confidence 5 4444433 58999999986532 3445667889999999999888531 2346788765
No 196
>PRK12742 oxidoreductase; Provisional
Probab=99.49 E-value=7.9e-13 Score=93.39 Aligned_cols=117 Identities=12% Similarity=0.193 Sum_probs=80.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||+++++.|+++|+ +|++..|+.. +..+++... ..+.++.+|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~---~v~~~~~~~~-----~~~~~l~~~--------------~~~~~~~~D~~ 61 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGA---NVRFTYAGSK-----DAAERLAQE--------------TGATAVQTDSA 61 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCCH-----HHHHHHHHH--------------hCCeEEecCCC
Confidence 5689999999999999999999999986 5555554321 122221110 12456788998
Q ss_pred CCCCCCChhHHHHHh---ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ---EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~---~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
+.+ ++.+.+ .++|++||++|.... .++++..+++|+.++..+++.+.+. ...+++|++|
T Consensus 62 ~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 131 (237)
T PRK12742 62 DRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG 131 (237)
T ss_pred CHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 754 344433 468999999986431 4567889999999999997776653 2235777764
No 197
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.49 E-value=5.7e-13 Score=96.37 Aligned_cols=120 Identities=9% Similarity=0.090 Sum_probs=83.0
Q ss_pred cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
|++++++||||++ +||++++++|++.|+ +|++..|+.. ..+.++++... .....++.+|
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga---~V~~~~r~~~---~~~~~~~~~~~-------------~g~~~~~~~D 65 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA---ELAFTYQGEA---LGKRVKPLAES-------------LGSDFVLPCD 65 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC---EEEEecCchH---HHHHHHHHHHh-------------cCCceEEeCC
Confidence 6789999999997 999999999999996 5666666421 12223322110 0122468899
Q ss_pred cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862 86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV 146 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ 146 (152)
+++++ ++.++ +.++|++|||||... ..++|+..+++|+.+++++++++.+. ..-.
T Consensus 66 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G 139 (271)
T PRK06505 66 VEDIA------SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG 139 (271)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc
Confidence 99865 34333 347899999999642 14567788999999999998887652 1224
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
++|++|
T Consensus 140 ~Iv~is 145 (271)
T PRK06505 140 SMLTLT 145 (271)
T ss_pred eEEEEc
Confidence 677764
No 198
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.48 E-value=9.7e-13 Score=93.68 Aligned_cols=128 Identities=10% Similarity=0.052 Sum_probs=82.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+|+||++++++|+++|+ .+++..|+.. ....+.+..+.. ...++.++.+|++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~ 66 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGS---LVVVNAKKRA-EEMNETLKMVKE-------------NGGEGIGVLADVS 66 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCh-HHHHHHHHHHHH-------------cCCeeEEEEeccC
Confidence 4578999999999999999999999987 4555554321 111111111111 1245678889998
Q ss_pred CCCCCC-ChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 88 QANLGI-KDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~-~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
++..-. ..+++...+.++|++||+||.... ...++..+++|+.+...+++++.+. ...++||++|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 140 (252)
T PRK06077 67 TREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIA 140 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEc
Confidence 865100 011222223468999999996321 3345678899999999999988753 1224777765
No 199
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.48 E-value=7.4e-13 Score=94.75 Aligned_cols=126 Identities=20% Similarity=0.167 Sum_probs=84.7
Q ss_pred cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCC------HHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862 8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLT------PKARLAEFSKLPVFERLRKECPAQLSRL 79 (152)
Q Consensus 8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (152)
+++++++||||+| +||.+++++|++.|+ .|++++|++.+.. ..+... +. ..+ .....++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~---~vi~~~r~~~~~~~~~~~~~~~~~~-~~-----~~~----~~~~~~~ 69 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGI---DIFFTYWSPYDKTMPWGMHDKEPVL-LK-----EEI----ESYGVRC 69 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCC---cEEEEcCCccccccccccchhhHHH-HH-----HHH----HhcCCeE
Confidence 4678999999995 899999999999986 6778887632110 011100 00 011 1113468
Q ss_pred EEEEcccCCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---
Q psy11862 80 HIIEGDILQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--- 142 (152)
Q Consensus 80 ~~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--- 142 (152)
.++.+|+++++ ++..+ +.++|++||+||.... .+.++..+++|+.++..+++++.+.
T Consensus 70 ~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 143 (256)
T PRK12748 70 EHMEIDLSQPY------APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDG 143 (256)
T ss_pred EEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhh
Confidence 89999999855 33333 3468999999986431 3456778999999999999988642
Q ss_pred CCCcceEecC
Q psy11862 143 KKLVVSLDIG 152 (152)
Q Consensus 143 ~~~~~~v~~S 152 (152)
...+++|++|
T Consensus 144 ~~~~~iv~~s 153 (256)
T PRK12748 144 KAGGRIINLT 153 (256)
T ss_pred cCCeEEEEEC
Confidence 1235788775
No 200
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.48 E-value=7.1e-13 Score=96.02 Aligned_cols=106 Identities=17% Similarity=0.139 Sum_probs=77.6
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++|||+ |+||++++++|. .|+ +|++++|+.. ...+...++.. ...++.++.+|++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~---~Vv~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv~d~ 61 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK---KVLLADYNEE--NLEAAAKTLRE-------------AGFDVSTQEVDVSSR 61 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEeecCCH
Confidence 468999997 799999999996 675 7788888532 12222222111 124678899999986
Q ss_pred CCCCChhHHHHHh------ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 90 NLGIKDSDLLMLQ------EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 90 ~~~~~~~~~~~~~------~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
+ ++.+++ .++|++|||||......++..++++|+.++.++++++.+
T Consensus 62 ~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 113 (275)
T PRK06940 62 E------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGK 113 (275)
T ss_pred H------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHH
Confidence 5 344333 468999999998765677888999999999999998865
No 201
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.48 E-value=6e-13 Score=90.67 Aligned_cols=97 Identities=23% Similarity=0.386 Sum_probs=80.2
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+|+||+|++|++++++|+++|+ +|++++|++. ...+ ..+++++.+|+.|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~---~V~~~~R~~~--~~~~---------------------~~~~~~~~~d~~d~--- 51 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH---EVTALVRSPS--KAED---------------------SPGVEIIQGDLFDP--- 51 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS---EEEEEESSGG--GHHH---------------------CTTEEEEESCTTCH---
T ss_pred eEEECCCChHHHHHHHHHHHCCC---EEEEEecCch--hccc---------------------ccccccceeeehhh---
Confidence 78999999999999999999985 8899999754 1111 26899999999885
Q ss_pred CChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 93 IKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+++.+.++++|+||++++.... +...+.++++++++. +++++|++|
T Consensus 52 ---~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s 97 (183)
T PF13460_consen 52 ---DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLS 97 (183)
T ss_dssp ---HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEE
T ss_pred ---hhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeee
Confidence 4799999999999999975432 177788999999997 788999876
No 202
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.48 E-value=1.7e-13 Score=100.18 Aligned_cols=94 Identities=19% Similarity=0.185 Sum_probs=72.7
Q ss_pred EEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862 14 LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGI 93 (152)
Q Consensus 14 lItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 93 (152)
+||||+||||+++++.|++.|+. ++++.+. ..+|++++.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~---v~~~~~~-----------------------------------~~~Dl~~~~--- 39 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFT---NLVLRTH-----------------------------------KELDLTRQA--- 39 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCc---EEEeecc-----------------------------------ccCCCCCHH---
Confidence 69999999999999999999874 3333221 136887754
Q ss_pred ChhHHHHHhc--cccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 94 KDSDLLMLQE--EVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 94 ~~~~~~~~~~--~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++..+++ ++|+|||+|+..+. ..+....++.|+.++.++++++.+. ++++||++|
T Consensus 40 ---~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~S 100 (306)
T PLN02725 40 ---DVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLG 100 (306)
T ss_pred ---HHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeC
Confidence 5766665 57999999987542 2345568899999999999999997 688999986
No 203
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.48 E-value=7.3e-13 Score=95.84 Aligned_cols=122 Identities=10% Similarity=0.051 Sum_probs=84.9
Q ss_pred cccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862 6 RWYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE 83 (152)
Q Consensus 6 ~~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
..|++++++||||+ ++||.++++.|+++|+ +|++..|+. ...++++.+... ......+.
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~---~V~l~~r~~---~~~~~~~~l~~~-------------~~~~~~~~ 66 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQGD---ALKKRVEPLAAE-------------LGAFVAGH 66 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCch---HHHHHHHHHHHh-------------cCCceEEe
Confidence 45778999999997 8999999999999996 566666632 123333333211 12245688
Q ss_pred cccCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CC
Q psy11862 84 GDILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KK 144 (152)
Q Consensus 84 ~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~ 144 (152)
+|+++++ +++++ +.++|++|||||... ..+.+...+++|+.++..+++++.+. .+
T Consensus 67 ~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 140 (272)
T PRK08159 67 CDVTDEA------SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD 140 (272)
T ss_pred cCCCCHH------HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9999865 34433 346899999999652 13567889999999999999988753 22
Q ss_pred CcceEecC
Q psy11862 145 LVVSLDIG 152 (152)
Q Consensus 145 ~~~~v~~S 152 (152)
-.++|++|
T Consensus 141 ~g~Iv~is 148 (272)
T PRK08159 141 GGSILTLT 148 (272)
T ss_pred CceEEEEe
Confidence 25676654
No 204
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.48 E-value=4.5e-13 Score=95.12 Aligned_cols=114 Identities=23% Similarity=0.205 Sum_probs=81.4
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.+++++|+++|+ +|++++|+.... +.. ....++.++.+|+++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~---~v~~~~r~~~~~-----~~~---------------~~~~~~~~~~~D~~~~ 57 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI---AVLGVARSRHPS-----LAA---------------AAGERLAEVELDLSDA 57 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC---EEEEEecCcchh-----hhh---------------ccCCeEEEEEeccCCH
Confidence 46899999999999999999999986 677788864311 100 0124688899999986
Q ss_pred CCCCChhHHHHHh-----------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862 90 NLGIKDSDLLMLQ-----------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLVV 147 (152)
Q Consensus 90 ~~~~~~~~~~~~~-----------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~ 147 (152)
+ ++.+.+ .++|++|||+|.... .+.++..+++|+.++..+.+.+.+. .+.++
T Consensus 58 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 131 (243)
T PRK07023 58 A------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR 131 (243)
T ss_pred H------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCE
Confidence 5 343321 157999999987532 3556778999999988887776542 23468
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 132 iv~is 136 (243)
T PRK07023 132 ILHIS 136 (243)
T ss_pred EEEEe
Confidence 88875
No 205
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.48 E-value=5.1e-13 Score=98.03 Aligned_cols=108 Identities=20% Similarity=0.301 Sum_probs=76.6
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+||||+|++|+++++.|.+.|+ ..|++++|..... .+..+ . ...+..|+.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~----~~~~~-----------------~-~~~~~~d~~~~~-- 54 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI--TDILVVDNLRDGH----KFLNL-----------------A-DLVIADYIDKED-- 54 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC--ceEEEEecCCCch----hhhhh-----------------h-heeeeccCcchh--
Confidence 68999999999999999999986 2566666643311 11110 0 123456776654
Q ss_pred CChhHHHHHh----ccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 93 IKDSDLLMLQ----EEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~----~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+..+. .++|+|||+|+.... ..+....+++|+.++.++++++.+. +. +||++|
T Consensus 55 ----~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~S 113 (314)
T TIGR02197 55 ----FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYAS 113 (314)
T ss_pred ----HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEc
Confidence 244443 479999999997543 3456678899999999999999886 45 798886
No 206
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.48 E-value=8.7e-13 Score=94.35 Aligned_cols=117 Identities=18% Similarity=0.125 Sum_probs=81.2
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||.+++++|+++|+ .|++++|+.. ...+...+ -...++.+|+
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~------------------~~~~~~~~D~ 60 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGA---TVVVGDIDPE--AGKAAADE------------------VGGLFVPTDV 60 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHH------------------cCCcEEEeeC
Confidence 47889999999999999999999999986 6777777532 11111111 0124678999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcc
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALK---MKKLVV 147 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~ 147 (152)
++++ ++.+++ .++|++||++|.... .+.+...+++|+.++..+++.+.+ ..+..+
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~ 134 (255)
T PRK06057 61 TDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGS 134 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcE
Confidence 8854 444444 367999999986431 244677899999999988887753 113456
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 135 iv~~s 139 (255)
T PRK06057 135 IINTA 139 (255)
T ss_pred EEEEc
Confidence 77654
No 207
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.48 E-value=7.9e-13 Score=97.25 Aligned_cols=115 Identities=23% Similarity=0.308 Sum_probs=82.4
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+++||||+|++|.++++.|++.|+ +|++++|..... .+.+..... ..++.++.+|+.+++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~---~V~~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~D~~~~~- 60 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH---EVVVLDNLSNGS--PEALKRGER--------------ITRVTFVEGDLRDRE- 60 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC---eEEEEeCCCccc--hhhhhhhcc--------------ccceEEEECCCCCHH-
Confidence 589999999999999999999987 455555432211 111111100 125778889998855
Q ss_pred CCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 92 GIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.++++ ++|+|||+||.... .....+.++.|+.++.++++++.+. +++++|++|
T Consensus 61 -----~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~s 120 (328)
T TIGR01179 61 -----LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSS 120 (328)
T ss_pred -----HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEec
Confidence 5777665 68999999997532 2344557889999999999999887 577888876
No 208
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.48 E-value=1.1e-12 Score=93.88 Aligned_cols=122 Identities=21% Similarity=0.272 Sum_probs=85.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||++++++|++.|+ ..|++++|+.. +..+....+.. ....+.++.+|++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~ 66 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAE--KGEAQAAELEA-------------LGAKAVFVQADLS 66 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHH--HHHHHHHHHHh-------------cCCeEEEEEccCC
Confidence 6789999999999999999999999986 23788887532 22222222211 1246778899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v 149 (152)
+++ ++.+++ .++|++||++|... ..+.+...+++|+.++.++++++.+. ...+++|
T Consensus 67 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 140 (260)
T PRK06198 67 DVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIV 140 (260)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 854 344433 36899999999643 24556778999999999998887542 1134677
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 141 ~~s 143 (260)
T PRK06198 141 NIG 143 (260)
T ss_pred EEC
Confidence 765
No 209
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.48 E-value=9.5e-13 Score=94.41 Aligned_cols=119 Identities=13% Similarity=0.108 Sum_probs=82.1
Q ss_pred cCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+++++++|||+ +++||.+++++|++.|+ +|++.+|+... +..+.+... . ...+.++.+|
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~---~v~l~~r~~~~-~~~~~~~~~------------~---~~~~~~~~~D 65 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA---EVVLTGFGRAL-RLTERIAKR------------L---PEPAPVLELD 65 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC---EEEEecCccch-hHHHHHHHh------------c---CCCCcEEeCC
Confidence 67899999999 89999999999999986 67777775321 111222110 0 1246688999
Q ss_pred cCCCCCCCChhHHHHH-------hccccEEEecccccc-------c----hhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862 86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------L----EAELKENVAANTRGTQRLLDIALKM-KKLV 146 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ 146 (152)
+++++ ++.++ +.++|++|||||... + .+.+...+++|+.+++.+.+++.+. ..-.
T Consensus 66 v~~~~------~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g 139 (256)
T PRK07889 66 VTNEE------HLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGG 139 (256)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Confidence 99865 33333 346899999999752 1 2455667999999999998888653 1224
Q ss_pred ceEec
Q psy11862 147 VSLDI 151 (152)
Q Consensus 147 ~~v~~ 151 (152)
++|++
T Consensus 140 ~Iv~i 144 (256)
T PRK07889 140 SIVGL 144 (256)
T ss_pred eEEEE
Confidence 66654
No 210
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.47 E-value=1.5e-12 Score=92.02 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=81.1
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||++++++|+++|+ +|++++|++. +..+.+.. ..+.++.+|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~------------------~~~~~~~~D~~~~ 58 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ---PVIVSYRTHY--PAIDGLRQ------------------AGAQCIQADFSTN 58 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCch--hHHHHHHH------------------cCCEEEEcCCCCH
Confidence 47899999999999999999999986 6777887643 11222111 1356789999886
Q ss_pred CCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC--CcceEe
Q psy11862 90 NLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK--LVVSLD 150 (152)
Q Consensus 90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~ 150 (152)
+ ++... +.++|++||+||... ..+.++.++++|+.+++.+.+++.+. .+ ..++|+
T Consensus 59 ~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~ 132 (236)
T PRK06483 59 A------GIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIH 132 (236)
T ss_pred H------HHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 5 33332 346899999998642 14567889999999999888877652 12 346777
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 133 ~s 134 (236)
T PRK06483 133 IT 134 (236)
T ss_pred Ec
Confidence 64
No 211
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.47 E-value=1.3e-12 Score=92.61 Aligned_cols=119 Identities=15% Similarity=0.165 Sum_probs=83.1
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++|||++|++|+++++.|++.|+ +|++++|+.. ....+..... .....++.++.+|+++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~---~vi~~~r~~~-~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~~ 65 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY---RVIATYFSGN-DCAKDWFEEY-------------GFTEDQVRLKELDVTDTE 65 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCcH-HHHHHHHHHh-------------hccCCeEEEEEcCCCCHH
Confidence 5899999999999999999999986 7788887643 1111111111 011246889999999855
Q ss_pred CCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S 152 (152)
++.+++ .++|++||++|... ..+.++..+++|+.++.++.+++.+ ..+.++||++|
T Consensus 66 ------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 138 (245)
T PRK12824 66 ------ECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINIS 138 (245)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEC
Confidence 344433 36899999998643 2456777899999999998776532 12456888875
No 212
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.47 E-value=8.1e-13 Score=95.03 Aligned_cols=121 Identities=8% Similarity=0.107 Sum_probs=81.3
Q ss_pred ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.+++++++|||| +++||++++++|+++|+ +|++..|.. ...+.++++... ......+.+
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~---~v~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~ 63 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGA---ELAFTYVVD---KLEERVRKMAAE-------------LDSELVFRC 63 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCcH---HHHHHHHHHHhc-------------cCCceEEEC
Confidence 367899999997 67999999999999986 556655531 223333333211 122456889
Q ss_pred ccCCCCCCCChhHHHHHh-------ccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc--C
Q psy11862 85 DILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM--K 143 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~--~ 143 (152)
|+++++ ++.+++ .++|++|||||.... .+.++..+++|+.++..+.+++.+. .
T Consensus 64 Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~ 137 (261)
T PRK08690 64 DVASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG 137 (261)
T ss_pred CCCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh
Confidence 999865 444333 468999999997531 2346667889999999888876542 1
Q ss_pred CCcceEecC
Q psy11862 144 KLVVSLDIG 152 (152)
Q Consensus 144 ~~~~~v~~S 152 (152)
...++|++|
T Consensus 138 ~~g~Iv~is 146 (261)
T PRK08690 138 RNSAIVALS 146 (261)
T ss_pred cCcEEEEEc
Confidence 224677764
No 213
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.47 E-value=1.1e-12 Score=93.59 Aligned_cols=118 Identities=20% Similarity=0.192 Sum_probs=82.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++|||++|+||.+++++|++.|+ +|+++.|+.. ...+..+.+.. ....+.++.+|+++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~ 62 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF---AVAVADLNEE--TAKETAKEINQ-------------AGGKAVAYKLDVSDKD 62 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCCCCHH
Confidence 5799999999999999999999985 6777777532 22222222211 1246788999999865
Q ss_pred CCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S 152 (152)
++.+++ .++|++||++|... ..+.++..+++|+.++..+++++.. .+..+++|++|
T Consensus 63 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 63 ------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 344433 36799999998642 1456677899999999988777653 21235777764
No 214
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.47 E-value=2.6e-13 Score=99.57 Aligned_cols=107 Identities=21% Similarity=0.308 Sum_probs=69.6
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+||||+|+||++++++|++.|+ .++++.|+..... .... ...+|+.|..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~---~~v~~~~~~~~~~---~~~~----------------------~~~~~~~d~~-- 51 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGT---KFVN----------------------LVDLDIADYM-- 51 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC---ceEEEecCCCcch---HHHh----------------------hhhhhhhhhh--
Confidence 79999999999999999999986 3344444332110 0000 1123444321
Q ss_pred CChhH-HHHHh-----ccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 93 IKDSD-LLMLQ-----EEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 93 ~~~~~-~~~~~-----~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
..++ +...+ .++|+|||+||.... ..+....++.|+.++.+++++|.+. ++ +||++|
T Consensus 52 -~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~S 115 (308)
T PRK11150 52 -DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYAS 115 (308)
T ss_pred -hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEc
Confidence 0112 23333 268999999986442 2234457899999999999999987 55 688886
No 215
>PRK05855 short chain dehydrogenase; Validated
Probab=99.46 E-value=9.3e-13 Score=103.83 Aligned_cols=122 Identities=13% Similarity=0.077 Sum_probs=87.0
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+.+++++||||+|+||++++++|++.|+ +|++++|+.. ...+....+.. ...++.++.+|+
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv 373 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGA---EVVASDIDEA--AAERTAELIRA-------------AGAVAHAYRVDV 373 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCC
Confidence 35678999999999999999999999987 5788888542 11111111111 124688899999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-Ccce
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVS 148 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~ 148 (152)
++++ ++.+++ .++|++|||||.... .+.+..++++|+.++.++++++... .+ .+++
T Consensus 374 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i 447 (582)
T PRK05855 374 SDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHI 447 (582)
T ss_pred CCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9965 344333 358999999997542 4567778999999999998887542 12 2578
Q ss_pred EecC
Q psy11862 149 LDIG 152 (152)
Q Consensus 149 v~~S 152 (152)
|++|
T Consensus 448 v~~s 451 (582)
T PRK05855 448 VNVA 451 (582)
T ss_pred EEEC
Confidence 8876
No 216
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.46 E-value=1.7e-12 Score=87.09 Aligned_cols=120 Identities=18% Similarity=0.207 Sum_probs=83.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHH-HHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPK-ARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
++++||||+|++|.+++++|+++|. ..|++..|+....... ..+..+.. ...++.++.+|++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 65 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAELLAELEA-------------LGAEVTVVACDVADR 65 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHHHHHHHh-------------cCCeEEEEECCCCCH
Confidence 4789999999999999999999875 3567777765432111 11122111 125677889999885
Q ss_pred CCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
. ++.+++ .++|++||++|.... .+.++.++++|+.++.++++++... +.++++++|
T Consensus 66 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~s 135 (180)
T smart00822 66 A------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFS 135 (180)
T ss_pred H------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEc
Confidence 4 344333 357999999986432 3556778999999999999999765 566777764
No 217
>PRK12320 hypothetical protein; Provisional
Probab=99.46 E-value=5.4e-13 Score=106.56 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=78.3
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+|+||||+||||+++++.|++.|+ .|++++|..... ....+.++.+|+.++.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~---~Vi~ldr~~~~~------------------------~~~~ve~v~~Dl~d~~ 53 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH---TVSGIAQHPHDA------------------------LDPRVDYVCASLRNPV 53 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCChhhc------------------------ccCCceEEEccCCCHH
Confidence 4799999999999999999999987 677888743210 0146788999998753
Q ss_pred CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+.+.+.++|+|||+|+... .. ...+|+.++.+++++|++. ++ ++|++|
T Consensus 54 -------l~~al~~~D~VIHLAa~~~-~~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~S 101 (699)
T PRK12320 54 -------LQELAGEADAVIHLAPVDT-SA----PGGVGITGLAHVANAAARA-GA-RLLFVS 101 (699)
T ss_pred -------HHHHhcCCCEEEEcCccCc-cc----hhhHHHHHHHHHHHHHHHc-CC-eEEEEE
Confidence 6677778999999998642 11 2257999999999999987 55 688876
No 218
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.46 E-value=1.3e-12 Score=96.40 Aligned_cols=119 Identities=16% Similarity=0.161 Sum_probs=83.0
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
+++++||||+++||.+++++|+++| + +|++.+|+.. ...+...++. .....+.++.+|+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~---~V~l~~r~~~--~~~~~~~~l~-------------~~~~~~~~~~~Dl~~ 64 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW---HVIMACRDFL--KAEQAAKSLG-------------MPKDSYTIMHLDLGS 64 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC---EEEEEeCCHH--HHHHHHHHhc-------------CCCCeEEEEEcCCCC
Confidence 6799999999999999999999998 6 6777777532 1111111110 112467788999998
Q ss_pred CCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---C--CCcce
Q psy11862 89 ANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---K--KLVVS 148 (152)
Q Consensus 89 ~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~--~~~~~ 148 (152)
.+ ++.++ ..++|++|||||... ..+.+...+++|+.++..+++++.+. . +.+++
T Consensus 65 ~~------~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~I 138 (314)
T TIGR01289 65 LD------SVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRL 138 (314)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeE
Confidence 65 33332 346899999999642 13567778999999999998887542 1 13588
Q ss_pred EecC
Q psy11862 149 LDIG 152 (152)
Q Consensus 149 v~~S 152 (152)
|++|
T Consensus 139 V~vs 142 (314)
T TIGR01289 139 IIVG 142 (314)
T ss_pred EEEe
Confidence 8875
No 219
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.46 E-value=1.9e-12 Score=93.24 Aligned_cols=120 Identities=13% Similarity=0.131 Sum_probs=82.3
Q ss_pred cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
+++++++||||++ +||+++++.|++.|+ .|++..|+. ...+.++++... ......+.+|
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~---~vil~~r~~---~~~~~~~~~~~~-------------~~~~~~~~~D 64 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQND---KLKGRVEEFAAQ-------------LGSDIVLPCD 64 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCC---EEEEEecch---hHHHHHHHHHhc-------------cCCceEeecC
Confidence 6789999999985 999999999999997 566666642 223333333211 1345678899
Q ss_pred cCCCCCCCChhHHHHHh-------ccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc-CCC
Q psy11862 86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM-KKL 145 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~ 145 (152)
+++++ ++.+++ .++|++|||||.... .+.|+..+++|+.++..+.+++... ..-
T Consensus 65 l~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 138 (262)
T PRK07984 65 VAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 138 (262)
T ss_pred CCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC
Confidence 99865 444433 368999999986421 3456678899999999988887643 112
Q ss_pred cceEecC
Q psy11862 146 VVSLDIG 152 (152)
Q Consensus 146 ~~~v~~S 152 (152)
.++|++|
T Consensus 139 g~Iv~is 145 (262)
T PRK07984 139 SALLTLS 145 (262)
T ss_pred cEEEEEe
Confidence 4676654
No 220
>PRK06484 short chain dehydrogenase; Validated
Probab=99.46 E-value=1.3e-12 Score=102.20 Aligned_cols=119 Identities=15% Similarity=0.196 Sum_probs=86.2
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
...+++++||||+|+||.+++++|+++|+ +|++.+|+.. .++.+... ...++..+.+|+
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~ 324 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGD---RLLIIDRDAE------GAKKLAEA------------LGDEHLSVQADI 324 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHH------------hCCceeEEEccC
Confidence 34689999999999999999999999986 6788887532 22221110 024566789999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEe
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLD 150 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~ 150 (152)
++++ ++.+++ .++|++|||||... ..+.++.++++|+.+++++.+++.+. .+.+++|+
T Consensus 325 ~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~ 398 (520)
T PRK06484 325 TDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVN 398 (520)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEE
Confidence 9865 343333 46899999999752 14567789999999999999998763 23357887
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 399 is 400 (520)
T PRK06484 399 LG 400 (520)
T ss_pred EC
Confidence 75
No 221
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.46 E-value=1.2e-12 Score=105.00 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=87.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||.+++++|++.|+ +|++++|+.. ...+...++.. ...++.++.+|+
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv 429 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGA---TVFLVARNGE--ALDELVAEIRA-------------KGGTAHAYTCDL 429 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEecC
Confidence 46789999999999999999999999986 6788888542 22222222211 124688899999
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVV 147 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~ 147 (152)
++++ ++.+++ .++|++|||||.... .+++...+++|+.++.++++++.+. .+.++
T Consensus 430 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 503 (657)
T PRK07201 430 TDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGH 503 (657)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence 9865 444443 368999999996421 2456778999999999998887542 24568
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 504 iv~is 508 (657)
T PRK07201 504 VVNVS 508 (657)
T ss_pred EEEEC
Confidence 88875
No 222
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.46 E-value=1.4e-12 Score=93.51 Aligned_cols=117 Identities=19% Similarity=0.230 Sum_probs=78.5
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|+||++++++|++.|+ +|++.+|++. .+.+...++.. ..++.++.+|+++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~--------------~~~~~~~~~Dv~d~~ 61 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA---RVVISSRNEE--NLEKALKELKE--------------YGEVYAVKADLSDKD 61 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh--------------cCCceEEEcCCCCHH
Confidence 4799999999999999999999986 6778887542 12222222211 135778899999865
Q ss_pred CCCChhHHHHHh-------ccccEEEecccccc-----c----hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEe
Q psy11862 91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-----L----EAELKENVAANTRGTQRLLDIALK----MKKLVVSLD 150 (152)
Q Consensus 91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~ 150 (152)
++.+++ .++|++||+||... . .+++.+.+.+|+.++..+.+++.. ..+.+++|+
T Consensus 62 ------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~ 135 (259)
T PRK08340 62 ------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVY 135 (259)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 344333 47899999999642 1 234555678888887766655432 123467888
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 136 is 137 (259)
T PRK08340 136 LS 137 (259)
T ss_pred Ee
Confidence 75
No 223
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.45 E-value=2.3e-12 Score=91.17 Aligned_cols=119 Identities=19% Similarity=0.240 Sum_probs=80.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|++|.++++.|++.|+ +++++.|+.. ....+...+.. ....++.++.+|+++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~-~~~~~~~~~~~-------------~~~~~~~~~~~D~~~~~ 63 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY---RVAANCGPNE-ERAEAWLQEQG-------------ALGFDFRVVEGDVSSFE 63 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHH-------------hhCCceEEEEecCCCHH
Confidence 5799999999999999999999986 5666776321 11111111110 01246888999999854
Q ss_pred CCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 91 LGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
++.++ ..++|+|||++|... ..+++...++.|+.++..+++.+... .+.+++|++|
T Consensus 64 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is 136 (242)
T TIGR01829 64 ------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINIS 136 (242)
T ss_pred ------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 34333 346899999998643 14566778899999998877665431 2456888876
No 224
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.5e-12 Score=92.61 Aligned_cols=109 Identities=19% Similarity=0.183 Sum_probs=74.6
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.+++++|+++|+ .+++..++.. ....+....+.. ...++.++.+|++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~---~vv~~~~~~~-~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGY---AVCLNYLRNR-DAAEAVVQAIRR-------------QGGEALAVAADVADE 64 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---eEEEecCCCH-HHHHHHHHHHHh-------------CCCcEEEEEeccCCH
Confidence 46899999999999999999999986 4444443221 111111111111 124577889999986
Q ss_pred CCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
+ ++.+++ .++|++||++|.... .+++...+++|+.++.++++++.+
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 65 A------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4 344443 368999999997531 345667899999999999888765
No 225
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.45 E-value=1.3e-12 Score=100.58 Aligned_cols=119 Identities=20% Similarity=0.159 Sum_probs=84.7
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++|||++|+||.++++.|.++|+ +|++++|+.. .+.+.++... .+..++.+|+
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga---~vi~~~~~~~----~~~l~~~~~~--------------~~~~~~~~Dv 265 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGA---HVVCLDVPAA----GEALAAVANR--------------VGGTALALDI 265 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCcc----HHHHHHHHHH--------------cCCeEEEEeC
Confidence 45789999999999999999999999986 6777777432 2222222110 1234678899
Q ss_pred CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862 87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL 149 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v 149 (152)
++++ ++.+++ .++|++||++|... ..+.++..+++|+.+++++.+++... ....+||
T Consensus 266 ~~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv 339 (450)
T PRK08261 266 TAPD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIV 339 (450)
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEE
Confidence 8864 333333 36899999999653 24667788999999999999998763 1225788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 340 ~~S 342 (450)
T PRK08261 340 GVS 342 (450)
T ss_pred EEC
Confidence 765
No 226
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.9e-12 Score=91.05 Aligned_cols=112 Identities=16% Similarity=0.117 Sum_probs=79.6
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+++||||+|+||+++++.|++.|+ +|++.+|+.. ++..+... ..+.++.+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~---~v~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~~~~- 57 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH---KVTLVGARRD------DLEVAAKE--------------LDVDAIVCDNTDPA- 57 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHh--------------ccCcEEecCCCCHH-
Confidence 699999999999999999999986 6677777532 22221110 13457789998865
Q ss_pred CCChhHHHHHhc----cccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 92 GIKDSDLLMLQE----EVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~~----~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
++.++++ ++|++||++|... ..+.+..++++|+.+++.+++++.+. ....++|++|
T Consensus 58 -----~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is 130 (223)
T PRK05884 58 -----SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV 130 (223)
T ss_pred -----HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence 4555443 5899999987411 13567789999999999999998753 1235777764
No 227
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.45 E-value=1.1e-12 Score=89.30 Aligned_cols=120 Identities=22% Similarity=0.286 Sum_probs=84.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+.|-+|+||||+.|||.++++++.+.|- +|++++|+ .+++++.... .+.+..+.+|+.
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN---~VIi~gR~------e~~L~e~~~~-------------~p~~~t~v~Dv~ 60 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGN---TVIICGRN------EERLAEAKAE-------------NPEIHTEVCDVA 60 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCC---EEEEecCc------HHHHHHHHhc-------------Ccchheeeeccc
Confidence 5678999999999999999999999984 77888876 3445444321 367888899999
Q ss_pred CCCCCCChhHH----HHHhccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 88 QANLGIKDSDL----LMLQEEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~----~~~~~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
|... ..++ .+.....+++|||||+... .++..+-+++|+.++..|..+..++ +....+|.+
T Consensus 61 d~~~---~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInV 137 (245)
T COG3967 61 DRDS---RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINV 137 (245)
T ss_pred chhh---HHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEe
Confidence 8652 1122 2223367999999997641 2334456889999999988887653 223456666
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 138 S 138 (245)
T COG3967 138 S 138 (245)
T ss_pred c
Confidence 5
No 228
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.3e-12 Score=93.03 Aligned_cols=117 Identities=22% Similarity=0.237 Sum_probs=80.7
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||++++++|+++|+ +|++++|++. +.+..+.. ....++.++.+|++++
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~---~V~~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~D~~~~ 60 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGT---HVISISRTEN-----KELTKLAE------------QYNSNLTFHSLDLQDV 60 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCC---EEEEEeCCch-----HHHHHHHh------------ccCCceEEEEecCCCH
Confidence 36899999999999999999999986 6777887542 12222111 1125688899999986
Q ss_pred CCCCChhHHHHHhccc-----------cEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCc
Q psy11862 90 NLGIKDSDLLMLQEEV-----------SVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM----KKLV 146 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~-----------d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~ 146 (152)
+ ++.++++.+ .++||++|... ..+.+...+++|+.++..+++.+.+. +..+
T Consensus 61 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T PRK06924 61 H------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDK 134 (251)
T ss_pred H------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCc
Confidence 5 454444321 27899998643 14566778899999988888776542 2235
Q ss_pred ceEecC
Q psy11862 147 VSLDIG 152 (152)
Q Consensus 147 ~~v~~S 152 (152)
+||++|
T Consensus 135 ~iv~~s 140 (251)
T PRK06924 135 RVINIS 140 (251)
T ss_pred eEEEec
Confidence 788765
No 229
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.44 E-value=3.2e-12 Score=90.28 Aligned_cols=127 Identities=10% Similarity=0.042 Sum_probs=82.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+++||++++++|++.|+ .|++.+|+.. .+.+..+.+.. ...++..+.+|++
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~---~V~~~~r~~~--~l~~~~~~i~~-------------~~~~~~~~~~D~~ 64 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGA---TLILCDQDQS--ALKDTYEQCSA-------------LTDNVYSFQLKDF 64 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCCeEEEEccCC
Confidence 5789999999999999999999999986 6777787543 22222222211 1245677889998
Q ss_pred CCCCCCC-hhHHHHHhc-cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862 88 QANLGIK-DSDLLMLQE-EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~-~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S 152 (152)
+++.--. .+++.+.+. ++|++|||+|.... .+.+.+.+++|+.+++.+.+.+.+ .+..+.+|++|
T Consensus 65 ~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~is 143 (227)
T PRK08862 65 SQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVI 143 (227)
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 8651000 111222334 78999999974321 345666788898888887766543 21235777764
No 230
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.44 E-value=1.9e-12 Score=92.09 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=73.2
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++||||+|+||.++++.|++.|+ .+++..++.. ....+....+.. ...++.++.+|++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGW---SVGINYARDA-AAAEETADAVRA-------------AGGRACVVAGDVANE 64 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHh-------------cCCcEEEEEeccCCH
Confidence 46899999999999999999999986 4554443321 111111111111 124688999999886
Q ss_pred CCCCChhHHHHH-------hccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 90 NLGIKDSDLLML-------QEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
+ ++..+ +.++|++||+||.... .+++...+.+|+.++..+++++.+
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06947 65 A------DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR 125 (248)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4 33333 3468999999996421 345566799999999998766543
No 231
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.44 E-value=1.8e-12 Score=95.88 Aligned_cols=127 Identities=21% Similarity=0.172 Sum_probs=83.9
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.++.++||||+|+||.+++++|+++|+ +|++.+|++. .+.+..+++.. . ....++..+.+|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~---~Vil~~R~~~--~l~~~~~~l~~---------~--~~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL---NLVLVARNPD--KLKDVSDSIQS---------K--YSKTQIKTVVVDFSG 115 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC---CEEEEECCHH--HHHHHHHHHHH---------H--CCCcEEEEEEEECCC
Confidence 478999999999999999999999986 5678888643 22221122111 0 012357778899975
Q ss_pred CCCCCChhHHHHHhcc--ccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEE--VSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~--~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
... -..+++.+.+.+ +|++|||||... ..+.++..+++|+.++..+.+++.+. .+.+++|++|
T Consensus 116 ~~~-~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iS 192 (320)
T PLN02780 116 DID-EGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIG 192 (320)
T ss_pred CcH-HHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEe
Confidence 210 001233444443 569999999742 13456678999999999999987642 2446788875
No 232
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.44 E-value=4.5e-13 Score=97.65 Aligned_cols=95 Identities=26% Similarity=0.337 Sum_probs=69.3
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++|||++|++|+++.+.|.+.|+ .++...|. ..|+.+.+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~---~v~~~~r~------------------------------------~~dl~d~~ 41 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY---EVIATSRS------------------------------------DLDLTDPE 41 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE---EEEEESTT------------------------------------CS-TTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC---EEEEeCch------------------------------------hcCCCCHH
Confidence 6899999999999999999998875 56666542 35777743
Q ss_pred CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+.++ ++|+|||+||..+. +.+.+..+.+|+.++.+|+++|... + .++||+|
T Consensus 42 ------~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~S 100 (286)
T PF04321_consen 42 ------AVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHIS 100 (286)
T ss_dssp ------HHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEE
T ss_pred ------HHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEee
Confidence 5777766 58999999998764 4577789999999999999999987 4 3888876
No 233
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.44 E-value=2.8e-12 Score=90.58 Aligned_cols=114 Identities=19% Similarity=0.172 Sum_probs=79.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|+||++++++|++.|+++ .+....|+.... ....++.++.+|+++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~-----------------------~~~~~~~~~~~Dls~~~ 56 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD-----------------------FQHDNVQWHALDVTDEA 56 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc-----------------------cccCceEEEEecCCCHH
Confidence 589999999999999999999987654 455555533210 01256788999999865
Q ss_pred CCCChhHHHHHhccccEEEeccccccc-------------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKL-------------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-------------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~ 151 (152)
. .+++.+.++++|++||++|.... .+.+...+++|+.++..+++.+.+. .+..+++++
T Consensus 57 ~---~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~i 130 (235)
T PRK09009 57 E---IKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVI 130 (235)
T ss_pred H---HHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEE
Confidence 1 22233445689999999997531 2345668999999999998888653 123466655
No 234
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.3e-12 Score=93.06 Aligned_cols=119 Identities=14% Similarity=0.140 Sum_probs=80.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++||||+|+||.++++.|++.|+ .|++++|+.. ...+...++... ....+.++.+|+++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~---~vv~~~r~~~--~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~ 63 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA---ELFLTDRDAD--GLAQTVADARAL------------GGTVPEHRALDISDYD 63 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc------------CCCcceEEEeeCCCHH
Confidence 4799999999999999999999986 5777777532 122222222110 1123456789998855
Q ss_pred CCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEecC
Q psy11862 91 LGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~S 152 (152)
++.++ +.++|++||++|... ..+++...+++|+.++..+++++.+. ...+++|++|
T Consensus 64 ------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~is 137 (272)
T PRK07832 64 ------AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVS 137 (272)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence 33332 346899999998643 24566778999999999999997541 1235787765
No 235
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.44 E-value=3.9e-12 Score=91.14 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=82.5
Q ss_pred cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-----HHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-----PKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
+++++++||||+| +||++++++|+++|+ +|++..|...... ..+....+. +.++ ....++.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~---~vi~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~g~~~~ 71 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA---DIFFTYWTAYDKEMPWGVDQDEQIQLQ-----EELL----KNGVKVS 71 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEecccccccccccccHHHHHHHH-----HHHH----hcCCeEE
Confidence 6789999999995 899999999999986 5565543211100 011111110 0111 1135788
Q ss_pred EEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---K 143 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~ 143 (152)
++.+|+++++ ++.+++ ..+|++||+||.... .+.+...+++|+.++..+.+++.+. .
T Consensus 72 ~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 145 (256)
T PRK12859 72 SMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK 145 (256)
T ss_pred EEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence 8999999865 344333 357999999986531 4567778999999999987666432 1
Q ss_pred CCcceEecC
Q psy11862 144 KLVVSLDIG 152 (152)
Q Consensus 144 ~~~~~v~~S 152 (152)
+.++||++|
T Consensus 146 ~~g~iv~is 154 (256)
T PRK12859 146 SGGRIINMT 154 (256)
T ss_pred CCeEEEEEc
Confidence 245888875
No 236
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.44 E-value=2.5e-12 Score=92.45 Aligned_cols=121 Identities=10% Similarity=0.109 Sum_probs=82.8
Q ss_pred ccCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 7 WYAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 7 ~~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.+++++++||||++ +||.++++.|+++|+ +|++..|+. ...+.++++... .....++.+
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~---~v~~~~r~~---~~~~~~~~l~~~-------------~g~~~~~~~ 65 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGA---ELWFTYQSE---VLEKRVKPLAEE-------------IGCNFVSEL 65 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCC---EEEEEeCch---HHHHHHHHHHHh-------------cCCceEEEc
Confidence 36789999999997 899999999999986 566666642 122333333211 011235689
Q ss_pred ccCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCC
Q psy11862 85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKL 145 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~ 145 (152)
|+++++ ++.++ +.++|++|||+|... ..+.|...+++|+.+++.+++.+.+. ..-
T Consensus 66 Dv~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~ 139 (260)
T PRK06603 66 DVTNPK------SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG 139 (260)
T ss_pred cCCCHH------HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 999965 34333 346899999998632 14567789999999999999887642 122
Q ss_pred cceEecC
Q psy11862 146 VVSLDIG 152 (152)
Q Consensus 146 ~~~v~~S 152 (152)
.++|++|
T Consensus 140 G~Iv~is 146 (260)
T PRK06603 140 GSIVTLT 146 (260)
T ss_pred ceEEEEe
Confidence 5777764
No 237
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.43 E-value=2.7e-12 Score=92.31 Aligned_cols=121 Identities=14% Similarity=0.151 Sum_probs=81.9
Q ss_pred ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.+++++++|||| +++||.+++++|++.|+ +|++..|.. ...+.++++... ......+.+
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~---~v~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~ 63 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGA---ELAFTYVGD---RFKDRITEFAAE-------------FGSDLVFPC 63 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCC---eEEEEccch---HHHHHHHHHHHh-------------cCCcceeec
Confidence 367899999996 68999999999999997 555555431 112333332110 012246789
Q ss_pred ccCCCCCCCChhHHHHH-------hccccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhc-CC
Q psy11862 85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKM-KK 144 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~ 144 (152)
|+++++ ++.++ +.++|++|||||... ..++|+..+++|+.++..+.+++.+. .+
T Consensus 64 Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~ 137 (260)
T PRK06997 64 DVASDE------QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD 137 (260)
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 999865 34333 347899999998642 13467778999999999999988763 12
Q ss_pred CcceEecC
Q psy11862 145 LVVSLDIG 152 (152)
Q Consensus 145 ~~~~v~~S 152 (152)
.+++|++|
T Consensus 138 ~g~Ii~is 145 (260)
T PRK06997 138 DASLLTLS 145 (260)
T ss_pred CceEEEEe
Confidence 25677664
No 238
>KOG1208|consensus
Probab=99.43 E-value=5.9e-13 Score=97.76 Aligned_cols=129 Identities=19% Similarity=0.250 Sum_probs=89.7
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC-CCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR-GLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
.+.+++++|||+++|||.+++++|+.+| ..|++.+|+.. ...+.+.+.. +.....+.++.+|
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~~--------------~~~~~~i~~~~lD 94 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQK--------------GKANQKIRVIQLD 94 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHh--------------cCCCCceEEEECC
Confidence 3577899999999999999999999998 48899999752 1222222222 1224678899999
Q ss_pred cCCCCCCCC-hhHHHHHhccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 86 ILQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 86 ~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+++...-.. .+.+.+...+.|++|+|||+... .+-++..+.+|+.|++.|.+++.+. ....|+|++|
T Consensus 95 Lssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vs 170 (314)
T KOG1208|consen 95 LSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVS 170 (314)
T ss_pred CCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEc
Confidence 999552000 11222223478999999998653 2345668999999999998887642 1236888876
No 239
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.43 E-value=1.2e-12 Score=95.02 Aligned_cols=94 Identities=23% Similarity=0.291 Sum_probs=74.0
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+++||||+|++|+++++.|++.|+ .|++++|. .+|+.+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~---~v~~~~r~------------------------------------~~d~~~~~- 40 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR---VVVALTSS------------------------------------QLDLTDPE- 40 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEeCCc------------------------------------ccCCCCHH-
Confidence 489999999999999999999987 56776652 25776643
Q ss_pred CCChhHHHHHhcc--ccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 92 GIKDSDLLMLQEE--VSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~~~--~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.+.+++ +|+|||+++..... ......+++|+.++.++++++.+. +. +||++|
T Consensus 41 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~S 99 (287)
T TIGR01214 41 -----ALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHIS 99 (287)
T ss_pred -----HHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEe
Confidence 67777775 49999999975432 345668899999999999999886 43 788876
No 240
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.42 E-value=2.7e-12 Score=91.03 Aligned_cols=119 Identities=16% Similarity=0.172 Sum_probs=79.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEE-eecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI-LCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
+++++||||+|+||++++++|+++|+ .|++ ..|+.. ...+....+.. ....+..+.+|++|
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~---~v~~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~d 62 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGY---TVAVNYQQNLH--AAQEVVNLITQ-------------AGGKAFVLQADISD 62 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHHHHHh-------------CCCeEEEEEccCCC
Confidence 36899999999999999999999987 4444 334321 12222222211 12457889999998
Q ss_pred CCCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc------CCCcc
Q psy11862 89 ANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM------KKLVV 147 (152)
Q Consensus 89 ~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~ 147 (152)
++ ++.+++ .++|++||++|.... .+.++..+++|+.++..+.+++.+. .+.++
T Consensus 63 ~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~ 136 (247)
T PRK09730 63 EN------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGA 136 (247)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcE
Confidence 65 344443 357999999996421 3456678999999999888776542 11245
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
||++|
T Consensus 137 ~v~~s 141 (247)
T PRK09730 137 IVNVS 141 (247)
T ss_pred EEEEC
Confidence 88775
No 241
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.42 E-value=3.7e-12 Score=89.86 Aligned_cols=117 Identities=19% Similarity=0.252 Sum_probs=82.1
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
++|||++|+||+++++.|+++|+ +|++++|+... ...+....+.. ...++.++.+|++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~---~v~~~~r~~~~-~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~-- 61 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRSSEE-GAEEVVEELKA-------------YGVKALGVVCDVSDRE-- 61 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCchh-HHHHHHHHHHh-------------cCCceEEEEecCCCHH--
Confidence 58999999999999999999987 67788775421 11111111111 1246788999998865
Q ss_pred CChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 93 IKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
++.+++ .++|++||++|.... .+.+...+++|+.++..+++++.+. .+.++|+++|
T Consensus 62 ----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s 134 (239)
T TIGR01830 62 ----DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINIS 134 (239)
T ss_pred ----HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 344443 357999999997531 3556778999999999999988652 2346888875
No 242
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.42 E-value=6.5e-12 Score=90.17 Aligned_cols=124 Identities=23% Similarity=0.234 Sum_probs=84.2
Q ss_pred ccCCceEEEcCCcc-hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 7 WYAGRSVLVTGGTG-FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 7 ~~~~~~ilItG~~G-~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
.+++++++||||+| +||+++++.|+++|+ .|++.+|+.. ...+....+.. . ....++.++.+|
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~---~V~~~~~~~~--~~~~~~~~~~~---------~--~~~~~~~~~~~D 77 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA---RVVISDIHER--RLGETADELAA---------E--LGLGRVEAVVCD 77 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHH---------h--cCCceEEEEEcc
Confidence 46789999999996 899999999999987 5677776532 22222222111 0 011467888999
Q ss_pred cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-Ccc
Q psy11862 86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVV 147 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~ 147 (152)
+++++ ++.+++ .++|++||++|... ..+.+...+++|+.++..+++++.+. .+ ..+
T Consensus 78 l~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ 151 (262)
T PRK07831 78 VTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGV 151 (262)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 98854 344333 46899999999642 13567778999999999998887642 12 346
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
++++|
T Consensus 152 iv~~s 156 (262)
T PRK07831 152 IVNNA 156 (262)
T ss_pred EEEeC
Confidence 66653
No 243
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.41 E-value=3.7e-12 Score=89.34 Aligned_cols=113 Identities=16% Similarity=0.172 Sum_probs=80.6
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
|++++|||++|+||+++++.|++.|+ +|++++|+.. ..+++.. ..+.++.+|+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~---~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~ 56 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGW---RVIATARDAA------ALAALQA---------------LGAEALALDVADP 56 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCC---EEEEEECCHH------HHHHHHh---------------ccceEEEecCCCH
Confidence 46899999999999999999999986 6777887532 1111111 2345789999986
Q ss_pred CCCCChhHHHHH---hc--cccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862 90 NLGIKDSDLLML---QE--EVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~---~~--~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S 152 (152)
+ ++.++ +. ++|++||++|... ..++++..+++|+.++.++++++.+. ....+++++|
T Consensus 57 ~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~is 129 (222)
T PRK06953 57 A------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLS 129 (222)
T ss_pred H------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEc
Confidence 5 34443 22 5899999999752 24567779999999999999988752 1223566654
No 244
>KOG1200|consensus
Probab=99.41 E-value=4.8e-12 Score=85.69 Aligned_cols=127 Identities=14% Similarity=0.160 Sum_probs=88.4
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+..+.++||||+++||++++..|.+.|+ ++.+.+++.. .+++....+.. ..+...+.+|+
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Ga---rv~v~dl~~~--~A~ata~~L~g--------------~~~h~aF~~DV 71 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGA---RVAVADLDSA--AAEATAGDLGG--------------YGDHSAFSCDV 71 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCc---EEEEeecchh--hHHHHHhhcCC--------------CCccceeeecc
Confidence 35678999999999999999999999996 5666665443 22332222211 14677889999
Q ss_pred CCCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-----CCCcceEecC
Q psy11862 87 LQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-----KKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~S 152 (152)
++.+---. .+++.+.+..+++++||||+... .+.|++.+.+|+.+.+...+++.+. +..-++|.+|
T Consensus 72 S~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvs 150 (256)
T KOG1200|consen 72 SKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVS 150 (256)
T ss_pred CcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeeh
Confidence 98651000 12233334478999999998763 6889999999999999998888653 1223677765
No 245
>PRK06484 short chain dehydrogenase; Validated
Probab=99.41 E-value=4.8e-12 Score=99.06 Aligned_cols=118 Identities=19% Similarity=0.240 Sum_probs=84.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.++++++|||++++||.+++++|+++|+ +|++++|+.. .+.+...++ ..++.++.+|++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~D~~ 61 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGD---QVVVADRNVE--RARERADSL----------------GPDHHALAMDVS 61 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh----------------CCceeEEEeccC
Confidence 4678999999999999999999999986 6777777532 111111111 245678899999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-cc
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKL-VV 147 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~ 147 (152)
+++ ++.+++ .++|++|||||... ..+++...+++|+.++..+++++.+. .+. .+
T Consensus 62 ~~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~ 135 (520)
T PRK06484 62 DEA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAA 135 (520)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCe
Confidence 865 343333 46899999998631 14567889999999999999888653 122 37
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 136 iv~is 140 (520)
T PRK06484 136 IVNVA 140 (520)
T ss_pred EEEEC
Confidence 87765
No 246
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.40 E-value=3e-12 Score=90.01 Aligned_cols=114 Identities=22% Similarity=0.185 Sum_probs=80.2
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++|||++|++|+++++.|++.|+ .|++++|++... +.+.+ ..++.++.+|++++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~-----------------~~~~~~~~~D~~d~ 57 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQD---TALQA-----------------LPGVHIEKLDMNDP 57 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCC---EEEEEeCCCcch---HHHHh-----------------ccccceEEcCCCCH
Confidence 36899999999999999999999986 678888875421 11211 13466778899885
Q ss_pred CCCCChhHHHHHhc-----cccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhcC--CCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE-----EVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKMK--KLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~S 152 (152)
+ ++.++++ ++|++||++|.... ..++...+.+|+.++..+.+++.+.. +..+++++|
T Consensus 58 ~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~s 130 (225)
T PRK08177 58 A------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMS 130 (225)
T ss_pred H------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEc
Confidence 4 3444433 58999999987531 34566688899999999988886531 223555543
No 247
>PRK07069 short chain dehydrogenase; Validated
Probab=99.40 E-value=1e-11 Score=88.40 Aligned_cols=119 Identities=16% Similarity=0.130 Sum_probs=76.6
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+++||||+|+||+++++.|+++|+ +|++++|+... ...+....+... .....+..+.+|+++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~---~v~~~~r~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~- 64 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA---KVFLTDINDAA-GLDAFAAEINAA-----------HGEGVAFAAVQDVTDEA- 64 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcch-HHHHHHHHHHhc-----------CCCceEEEEEeecCCHH-
Confidence 389999999999999999999986 67888876321 111111111110 00123456788998865
Q ss_pred CCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHH----HHhcCCCcceEecC
Q psy11862 92 GIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDI----ALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~S 152 (152)
++.++ +.++|++||++|.... .+++...+++|+.+.+.+.+. +.+. +.++||++|
T Consensus 65 -----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~s 137 (251)
T PRK07069 65 -----QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNIS 137 (251)
T ss_pred -----HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEec
Confidence 34333 3468999999997542 345667889999865555444 4443 456888775
No 248
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.40 E-value=7.4e-12 Score=88.58 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=79.9
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
++||||+|+||.+++++|+++|+ +|++++|+... ...+...++.. ...++.++.+|+++++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~---~v~~~~~~~~~-~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~-- 61 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF---EICVHYHSGRS-DAESVVSAIQA-------------QGGNARLLQFDVADRV-- 61 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCCHH-HHHHHHHHHHH-------------cCCeEEEEEccCCCHH--
Confidence 58999999999999999999986 56677664321 11111111111 1256889999999865
Q ss_pred CChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHH-h---cCCCcceEecC
Q psy11862 93 IKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIAL-K---MKKLVVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~-~---~~~~~~~v~~S 152 (152)
++..++ .++|++||++|... ..+++..++++|+.++.++++++. . ..+.+++|++|
T Consensus 62 ----~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vs 135 (239)
T TIGR01831 62 ----ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLA 135 (239)
T ss_pred ----HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEc
Confidence 343333 36799999998643 245677789999999999988763 1 12345788775
No 249
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.39 E-value=4.7e-12 Score=89.10 Aligned_cols=113 Identities=17% Similarity=0.073 Sum_probs=80.9
Q ss_pred EEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862 14 LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGI 93 (152)
Q Consensus 14 lItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 93 (152)
+||||+|++|++++++|+++|+ .|++++|+.. ...+....+ . ...++.++.+|+++++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~~---------~-----~~~~~~~~~~Dl~~~~--- 58 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA---RVTIASRSRD--RLAAAARAL---------G-----GGAPVRTAALDITDEA--- 58 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHH---------h-----cCCceEEEEccCCCHH---
Confidence 5999999999999999999986 6788887532 111111111 0 0256788999999865
Q ss_pred ChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 94 KDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 94 ~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++.++++ ++|++||++|.... .+.++.++++|+.++.+++++.... +.+++|++|
T Consensus 59 ---~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~s 123 (230)
T PRK07041 59 ---AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVS 123 (230)
T ss_pred ---HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEEC
Confidence 5655554 58999999986431 4567778999999999999955443 456888765
No 250
>KOG0725|consensus
Probab=99.39 E-value=1.3e-11 Score=89.18 Aligned_cols=131 Identities=24% Similarity=0.256 Sum_probs=87.6
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+.+++++|||++.+||+++++.|++.|. +|++.+|+.. ...+...++... .....++..+.+|+
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga---~v~i~~r~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~Dv 69 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGA---KVVITGRSEE--RLEETAQELGGL----------GYTGGKVLAIVCDV 69 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc----------CCCCCeeEEEECcC
Confidence 47899999999999999999999999995 8888888654 222333332221 11136788999999
Q ss_pred CCCCCC--CChhHHHHHhccccEEEeccccccc--------hhhHHHHHHhhhHH-HHHHHHHHHhc---CCCcceEecC
Q psy11862 87 LQANLG--IKDSDLLMLQEEVSVVFNGAASLKL--------EAELKENVAANTRG-TQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~--~~~~~~~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~-~~~l~~~~~~~---~~~~~~v~~S 152 (152)
+++... +....+.+.+.++|+++||||.... ++.|+.++++|+.+ .+.+.+.+..+ .+...++++|
T Consensus 70 ~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~s 149 (270)
T KOG0725|consen 70 SKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNIS 149 (270)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 875410 0011122224579999999997642 67788899999995 66666666543 1234555543
No 251
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.39 E-value=9.1e-12 Score=88.60 Aligned_cols=121 Identities=15% Similarity=0.171 Sum_probs=81.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|||++|+||.++++.|+++|+ +|++++|+.. ...+..+++.. ...++.++.+|++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~---~vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~ 64 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQE--KLEEAVAECGA-------------LGTEVRGYAANVT 64 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence 5688999999999999999999999986 6777777542 11221121111 1356788999998
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc----------------chhhHHHHHHhhhHHHHHHHHHHHhc--
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK----------------LEAELKENVAANTRGTQRLLDIALKM-- 142 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~----------------~~~~~~~~~~~n~~~~~~l~~~~~~~-- 142 (152)
+++ ++.+++ .++|+|||++|... ..+.+..++++|+.++..+.+.+.+.
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~ 138 (253)
T PRK08217 65 DEE------DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMI 138 (253)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 854 233222 35799999998532 12456668899999999887765431
Q ss_pred --CCCcceEecC
Q psy11862 143 --KKLVVSLDIG 152 (152)
Q Consensus 143 --~~~~~~v~~S 152 (152)
....+++++|
T Consensus 139 ~~~~~~~iv~~s 150 (253)
T PRK08217 139 ESGSKGVIINIS 150 (253)
T ss_pred hcCCCeEEEEEc
Confidence 1224566654
No 252
>PLN00015 protochlorophyllide reductase
Probab=99.37 E-value=8.1e-12 Score=91.92 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=79.6
Q ss_pred EEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 14 LVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 14 lItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
+||||+++||.+++++|+++| + +|++.+|+.. ...+...++. .....+.++.+|+++.+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~---~V~~~~r~~~--~~~~~~~~l~-------------~~~~~~~~~~~Dl~d~~-- 60 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW---HVVMACRDFL--KAERAAKSAG-------------MPKDSYTVMHLDLASLD-- 60 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC---EEEEEeCCHH--HHHHHHHHhc-------------CCCCeEEEEEecCCCHH--
Confidence 599999999999999999998 6 6677777532 1111111111 11246778899999865
Q ss_pred CChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CC--CcceEecC
Q psy11862 93 IKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KK--LVVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~~S 152 (152)
++.+++ .++|++|||||.... .+.++..+++|+.+++.+++++.+. .+ .+++|++|
T Consensus 61 ----~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vs 136 (308)
T PLN00015 61 ----SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVG 136 (308)
T ss_pred ----HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Confidence 343332 368999999997421 3567789999999999998887542 12 35888875
No 253
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.37 E-value=1.3e-11 Score=99.40 Aligned_cols=124 Identities=19% Similarity=0.125 Sum_probs=84.4
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+++++++||||+|+||++++++|++.|+ .|++++|+.. ...+....+.. . .....+..+.+|+
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga---~Vvi~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~v~~Dv 474 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGA---HVVLADLNLE--AAEAVAAEING---------Q--FGAGRAVALKMDV 474 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCHH--HHHHHHHHHHh---------h--cCCCcEEEEECCC
Confidence 46789999999999999999999999986 6778887532 11111111110 0 0113567889999
Q ss_pred CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcce
Q psy11862 87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK----MKKLVVS 148 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~ 148 (152)
++++ ++.+++. ++|++|||||.... .+.+...+++|+.+.+.+.+.+.. .+...++
T Consensus 475 td~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~I 548 (676)
T TIGR02632 475 TDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNI 548 (676)
T ss_pred CCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9865 4544443 78999999997531 355777889999998888766543 2112478
Q ss_pred EecC
Q psy11862 149 LDIG 152 (152)
Q Consensus 149 v~~S 152 (152)
|++|
T Consensus 549 V~iS 552 (676)
T TIGR02632 549 VFIA 552 (676)
T ss_pred EEEe
Confidence 8765
No 254
>PRK08324 short chain dehydrogenase; Validated
Probab=99.37 E-value=8.1e-12 Score=100.74 Aligned_cols=120 Identities=20% Similarity=0.217 Sum_probs=85.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+.+++++||||+|+||+++++.|++.|+ .|++++|+.. ...+....+.. ...+.++.+|++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga---~Vvl~~r~~~--~~~~~~~~l~~--------------~~~v~~v~~Dvt 480 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGA---CVVLADLDEE--AAEAAAAELGG--------------PDRALGVACDVT 480 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEeCCHH--HHHHHHHHHhc--------------cCcEEEEEecCC
Confidence 5789999999999999999999999986 6788888643 11111111100 136788999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-cceE
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL-VVSL 149 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v 149 (152)
+++ ++.+++ .++|++||+||... ..+.+...+++|+.++..+++++.+. .+. ++||
T Consensus 481 d~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV 554 (681)
T PRK08324 481 DEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIV 554 (681)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 864 344433 37899999999643 24567778999999999998887542 132 5788
Q ss_pred ecC
Q psy11862 150 DIG 152 (152)
Q Consensus 150 ~~S 152 (152)
++|
T Consensus 555 ~vs 557 (681)
T PRK08324 555 FIA 557 (681)
T ss_pred EEC
Confidence 765
No 255
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.36 E-value=1.3e-11 Score=85.29 Aligned_cols=100 Identities=17% Similarity=0.244 Sum_probs=74.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|+||++++++|.++ + .|++.+|+.. .+.+|+++++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~~--------------------------------~~~~D~~~~~ 44 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSSG--------------------------------DVQVDITDPA 44 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCCC--------------------------------ceEecCCChH
Confidence 47999999999999999999887 4 6777776421 2478998865
Q ss_pred CCCChhHHHHHh---ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 91 LGIKDSDLLMLQ---EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~---~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
++++++ .++|++||++|.... .+++.+.+++|+.++.++++++.+. ....+|+++|
T Consensus 45 ------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 45 ------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred ------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 455444 478999999996431 4567778999999999999988652 1224677654
No 256
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.36 E-value=5.3e-12 Score=90.74 Aligned_cols=93 Identities=29% Similarity=0.324 Sum_probs=75.4
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+++|||++|.+|++|.+.|. .++ .|+.++|. ..|+++++
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~---~v~a~~~~------------------------------------~~Ditd~~- 40 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEF---EVIATDRA------------------------------------ELDITDPD- 40 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCc---eEEeccCc------------------------------------cccccChH-
Confidence 49999999999999999997 323 66776652 26898865
Q ss_pred CCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 92 GIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+.+.++ ++|+|||+|++... +.+....+.+|..++.+++++|.+.+ .++||+|
T Consensus 41 -----~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiS 99 (281)
T COG1091 41 -----AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHIS 99 (281)
T ss_pred -----HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEee
Confidence 5777777 68999999998875 55667799999999999999999973 3778776
No 257
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.36 E-value=7.3e-12 Score=90.92 Aligned_cols=104 Identities=22% Similarity=0.211 Sum_probs=71.4
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+||||+|+||+++++.|++.|+ .|++++|+....... ....+ .++.. .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~-----------------------~~~~~--~~~~~-~-- 49 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH---EVTILTRSPPAGANT-----------------------KWEGY--KPWAP-L-- 49 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC---EEEEEeCCCCCCCcc-----------------------cceee--ecccc-c--
Confidence 68999999999999999999986 788899876422100 00001 11111 1
Q ss_pred CChhHHHHHhccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhcCCC--cceEecC
Q psy11862 93 IKDSDLLMLQEEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKMKKL--VVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~S 152 (152)
.+...+.++|+|||+||.... ......+++.|+.++.++++++... ++ .+|++.|
T Consensus 50 ----~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S 111 (292)
T TIGR01777 50 ----AESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISAS 111 (292)
T ss_pred ----chhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEee
Confidence 244556789999999996542 1234567899999999999999987 44 3455543
No 258
>PRK05599 hypothetical protein; Provisional
Probab=99.35 E-value=2.2e-11 Score=86.86 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=77.0
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+++||.+++++|.+ |+ +|++.+|+.. .+.+..+++... ....+.++.+|++|++
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~---~Vil~~r~~~--~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~~ 62 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE---DVVLAARRPE--AAQGLASDLRQR------------GATSVHVLSFDAQDLD 62 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC---EEEEEeCCHH--HHHHHHHHHHhc------------cCCceEEEEcccCCHH
Confidence 5799999999999999999984 75 6788888643 222222222110 1134778999999965
Q ss_pred CCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862 91 LGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S 152 (152)
.--. .+++.+...++|++|||+|.... ...+.+++++|+.+...+.+.+.+ ....+++|++|
T Consensus 63 ~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~is 136 (246)
T PRK05599 63 THRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFS 136 (246)
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2000 11122223478999999997532 223445677888888777665532 21135787765
No 259
>PRK08017 oxidoreductase; Provisional
Probab=99.35 E-value=2.3e-11 Score=86.88 Aligned_cols=111 Identities=20% Similarity=0.166 Sum_probs=76.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++||||+|+||+++++.|+++|+ +|++++|+.. +++.... .++..+.+|+.+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~---~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~~ 58 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY---RVLAACRKPD------DVARMNS---------------LGFTGILLDLDDPE 58 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HhHHHHh---------------CCCeEEEeecCCHH
Confidence 6899999999999999999999986 6777777532 1221111 23567889998854
Q ss_pred CCCChhHHHHHh--------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHH----hcCCCcceEec
Q psy11862 91 LGIKDSDLLMLQ--------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIAL----KMKKLVVSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~--------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~ 151 (152)
++...+ ..+|.++|++|... ..+.++..++.|+.++.++.+.+. +. +.+++|++
T Consensus 59 ------~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ 131 (256)
T PRK08017 59 ------SVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMT 131 (256)
T ss_pred ------HHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEE
Confidence 333222 35789999998643 134566789999999888755543 33 45677776
Q ss_pred C
Q psy11862 152 G 152 (152)
Q Consensus 152 S 152 (152)
|
T Consensus 132 s 132 (256)
T PRK08017 132 S 132 (256)
T ss_pred c
Confidence 5
No 260
>KOG4169|consensus
Probab=99.34 E-value=6.9e-12 Score=86.70 Aligned_cols=110 Identities=22% Similarity=0.299 Sum_probs=80.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
++|+++++||+.|+||++++++|+..|. ..+.+..|.+. .+.+.++.+ ....+.+.++++|++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgi--k~~~i~~~~En----~~a~akL~a-----------i~p~~~v~F~~~DVt 65 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGI--KVLVIDDSEEN----PEAIAKLQA-----------INPSVSVIFIKCDVT 65 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCc--hheeehhhhhC----HHHHHHHhc-----------cCCCceEEEEEeccc
Confidence 5699999999999999999999999964 44555554333 222222221 112478889999999
Q ss_pred CCCCCCChhHHHHHh-------ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
++. ++++.+ +.+|++||+||+.+ +.+++..+.+|+.+..+-..++.+
T Consensus 66 ~~~------~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alp 119 (261)
T KOG4169|consen 66 NRG------DLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALP 119 (261)
T ss_pred cHH------HHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhh
Confidence 965 344444 47899999999876 778999999999887776666543
No 261
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.34 E-value=2.3e-11 Score=86.00 Aligned_cols=119 Identities=15% Similarity=0.189 Sum_probs=81.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+++++++|||++|++|+++++.|++.|+ .|++.+|+.. . .+.+ ..... ...+.++.+|+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~---~V~~~~r~~~--~-~~~~~~~~~~--------------~~~~~~~~~Dl 62 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGA---QVCINSRNEN--K-LKRMKKTLSK--------------YGNIHYVVGDV 62 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHHHh--------------cCCeEEEECCC
Confidence 4678999999999999999999999986 6788888532 1 1111 11110 13578889999
Q ss_pred CCCCCCCChhHHHHH-------hccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
++++ ++.++ +.++|.+||+++.... .+.+...++.|+.++..+++.+.+. ....++|++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 135 (238)
T PRK05786 63 SSTE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVS 135 (238)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEe
Confidence 9865 34333 3357999999985421 2445667899999999888887663 1224666654
No 262
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.34 E-value=2.4e-11 Score=87.01 Aligned_cols=119 Identities=19% Similarity=0.177 Sum_probs=79.0
Q ss_pred eEEEcCCcchhHHHHHHHHHh----hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLR----SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~----~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.++||||+++||.+++++|++ .|+ .|++.+|+.. .+.+...++.. . .....+.++.+|++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~---~V~~~~r~~~--~~~~~~~~l~~---------~--~~~~~v~~~~~Dl~ 65 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS---VLVLSARNDE--ALRQLKAEIGA---------E--RSGLRVVRVSLDLG 65 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc---EEEEEEcCHH--HHHHHHHHHHh---------c--CCCceEEEEEeccC
Confidence 689999999999999999987 565 6788888643 22222222211 0 01246788999999
Q ss_pred CCCCCCChhHHHHHhc-------c----ccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHhc----
Q psy11862 88 QANLGIKDSDLLMLQE-------E----VSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALKM---- 142 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~-------~----~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~---- 142 (152)
+++ ++.++++ . .|++|||||.... .+.+...+++|+.++..+.+++.+.
T Consensus 66 ~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~ 139 (256)
T TIGR01500 66 AEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDS 139 (256)
T ss_pred CHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhc
Confidence 865 3444332 1 2689999996321 2456778999999999988877642
Q ss_pred CC-CcceEecC
Q psy11862 143 KK-LVVSLDIG 152 (152)
Q Consensus 143 ~~-~~~~v~~S 152 (152)
++ .+++|++|
T Consensus 140 ~~~~~~iv~is 150 (256)
T TIGR01500 140 PGLNRTVVNIS 150 (256)
T ss_pred CCCCCEEEEEC
Confidence 11 24688765
No 263
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.33 E-value=3.7e-11 Score=88.19 Aligned_cols=138 Identities=10% Similarity=0.070 Sum_probs=81.1
Q ss_pred cCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccc-cCCcEEEEEc
Q psy11862 8 YAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPA-QLSRLHIIEG 84 (152)
Q Consensus 8 ~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 84 (152)
+++|+++|||+ +++||+++++.|++.|. +|++ .|... .+++......... .......... .......+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga---~Vv~-~~~~~--~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA---EILV-GTWVP--ALNIFETSLRRGK-FDESRKLPDGSLMEITKVYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEE-EeCcc--hhhHHHHhhhccc-cchhhhcccccccCcCeeeec
Confidence 78999999999 79999999999999995 6666 55332 1111111111100 0000000000 0112356788
Q ss_pred cc--CCCC-C-----------CCChhHHHHH-------hccccEEEecccccc---------chhhHHHHHHhhhHHHHH
Q psy11862 85 DI--LQAN-L-----------GIKDSDLLML-------QEEVSVVFNGAASLK---------LEAELKENVAANTRGTQR 134 (152)
Q Consensus 85 D~--~~~~-~-----------~~~~~~~~~~-------~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~ 134 (152)
|+ ++++ . +...+++.++ +.++|++|||||... ..+.|+..+++|+.+++.
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 88 3222 0 0001133333 346899999996421 146788899999999999
Q ss_pred HHHHHHhc-CCCcceEecC
Q psy11862 135 LLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 135 l~~~~~~~-~~~~~~v~~S 152 (152)
+.+++.+. ..-.++|++|
T Consensus 160 l~~~~~p~m~~~G~II~is 178 (303)
T PLN02730 160 LLQHFGPIMNPGGASISLT 178 (303)
T ss_pred HHHHHHHHHhcCCEEEEEe
Confidence 99988753 1125777765
No 264
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.30 E-value=2e-11 Score=88.74 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=72.6
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+|+||||||++|++++++|++.|+ .|.+++|++.... ...+..+.+|+.|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~---~V~~~~R~~~~~~------------------------~~~~~~~~~d~~d~~- 52 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV---PFLVASRSSSSSA------------------------GPNEKHVKFDWLDED- 52 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC---cEEEEeCCCcccc------------------------CCCCccccccCCCHH-
Confidence 489999999999999999999987 5788898764210 134556678998865
Q ss_pred CCChhHHHHHh------cc-ccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 92 GIKDSDLLMLQ------EE-VSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 92 ~~~~~~~~~~~------~~-~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+...+ ++ +|.++|+++... .. .....+++++|++. +++|||++|
T Consensus 53 -----~l~~a~~~~~~~~g~~d~v~~~~~~~~--~~--------~~~~~~~i~aa~~~-gv~~~V~~S 104 (285)
T TIGR03649 53 -----TWDNPFSSDDGMEPEISAVYLVAPPIP--DL--------APPMIKFIDFARSK-GVRRFVLLS 104 (285)
T ss_pred -----HHHHHHhcccCcCCceeEEEEeCCCCC--Ch--------hHHHHHHHHHHHHc-CCCEEEEee
Confidence 577777 56 999999876431 11 23445788899887 799999986
No 265
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.29 E-value=2.5e-11 Score=97.76 Aligned_cols=93 Identities=24% Similarity=0.234 Sum_probs=69.1
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
..|+++||||+|+||+++++.|.+.|+++ .. . .+|++|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v---~~-~--------------------------------------~~~l~d 416 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY---EY-G--------------------------------------KGRLED 416 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeE---Ee-e--------------------------------------cccccc
Confidence 45789999999999999999999887632 11 0 134555
Q ss_pred CCCCCChhHHHHHhc--cccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862 89 ANLGIKDSDLLMLQE--EVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKMKKLVVSLD 150 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~ 150 (152)
.. .+...+. ++|+|||+|+..+. ..+....+++|+.++.+++++|.+. +++.+++
T Consensus 417 ~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~~v~~ 479 (668)
T PLN02260 417 RS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLLMMNF 479 (668)
T ss_pred HH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCeEEEE
Confidence 33 3555554 78999999997632 2356678999999999999999997 6655443
No 266
>KOG1429|consensus
Probab=99.29 E-value=7.3e-12 Score=89.19 Aligned_cols=112 Identities=25% Similarity=0.356 Sum_probs=81.2
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
...+|+||||+||||++|++.|..+|+ .|++++....+. .+.+..+ .....++.+.-|+.
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh---~VIa~Dn~ftg~--k~n~~~~--------------~~~~~fel~~hdv~- 85 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGH---EVIALDNYFTGR--KENLEHW--------------IGHPNFELIRHDVV- 85 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCC---eEEEEecccccc--hhhcchh--------------ccCcceeEEEeech-
Confidence 457999999999999999999999996 778877654322 1111111 11245555555654
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
..++..+|-|+|+|+..+. ..++-+++..|+.++.+.+-.|++- + +||++.|
T Consensus 86 ----------~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aS 140 (350)
T KOG1429|consen 86 ----------EPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLAS 140 (350)
T ss_pred ----------hHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEee
Confidence 3466788999999987653 4556668899999999999999986 3 6888765
No 267
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.28 E-value=5.3e-11 Score=105.77 Aligned_cols=135 Identities=13% Similarity=0.119 Sum_probs=88.8
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH--------HHHHHHH-----hcCh---h--------
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP--------KARLAEF-----SKLP---V-------- 64 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~--------~~~~~~~-----~~~~---~-------- 64 (152)
++++++||||+++||.+++++|++++ . .++++++|+...... .+.+... ...+ .
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~-g-a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~ 2073 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQC-Q-AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALV 2073 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhc-C-CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcc
Confidence 57899999999999999999999983 2 378888987311000 0000000 0000 0
Q ss_pred -----hhhhhh---hccccCCcEEEEEcccCCCCCCCChhHHHHHhc------cccEEEecccccc-------chhhHHH
Q psy11862 65 -----FERLRK---ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQE------EVSVVFNGAASLK-------LEAELKE 123 (152)
Q Consensus 65 -----~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~-------~~~~~~~ 123 (152)
..++.. .....+..+.++.+|++|.+ ++.+++. ++|+|||+||... ..+.|..
T Consensus 2074 ~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~------av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~ 2147 (2582)
T TIGR02813 2074 RPVLSSLEIAQALAAFKAAGASAEYASADVTNSV------SVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNA 2147 (2582)
T ss_pred cccchhHHHHHHHHHHHhcCCcEEEEEccCCCHH------HHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHH
Confidence 000000 01123457889999999965 3443332 5899999999753 2577888
Q ss_pred HHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 124 NVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 124 ~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++++|+.+++++++++... ..++||++|
T Consensus 2148 v~~~nv~G~~~Ll~al~~~-~~~~IV~~S 2175 (2582)
T TIGR02813 2148 VYGTKVDGLLSLLAALNAE-NIKLLALFS 2175 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 9999999999999998775 456788765
No 268
>PLN00016 RNA-binding protein; Provisional
Probab=99.28 E-value=4.3e-11 Score=90.44 Aligned_cols=103 Identities=21% Similarity=0.281 Sum_probs=72.9
Q ss_pred CCceEEEc----CCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-H----HHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862 9 AGRSVLVT----GGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-P----KARLAEFSKLPVFERLRKECPAQLSRL 79 (152)
Q Consensus 9 ~~~~ilIt----G~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (152)
.+++|+|| ||+|++|++++++|++.|+ .|++++|+..... . ...+..+. ...+
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~l~---------------~~~v 112 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH---EVTLFTRGKEPSQKMKKEPFSRFSELS---------------SAGV 112 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC---EEEEEecCCcchhhhccCchhhhhHhh---------------hcCc
Confidence 45789999 9999999999999999997 6788888754210 0 00011110 1347
Q ss_pred EEEEcccCCCCCCCChhHHHHHh--ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 80 HIIEGDILQANLGIKDSDLLMLQ--EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 80 ~~~~~D~~~~~~~~~~~~~~~~~--~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.++.+|+.+ +...+ .++|+|||+++. +..++.++++++++. ++++||++|
T Consensus 113 ~~v~~D~~d---------~~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~S 164 (378)
T PLN00016 113 KTVWGDPAD---------VKSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCS 164 (378)
T ss_pred eEEEecHHH---------HHhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEc
Confidence 888899876 22232 478999998753 134677899999887 789999987
No 269
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.28 E-value=9.4e-11 Score=84.46 Aligned_cols=115 Identities=13% Similarity=0.115 Sum_probs=73.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++||||+|+||++++++|++.|+ .|+++.|+.. ..+.+..+++.. .....+.++.+|++|++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~---~V~~~~~~~~-~~~~~~~~~l~~------------~~~~~~~~~~~Dv~d~~ 65 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY---RVVLHYHRSA-AAASTLAAELNA------------RRPNSAVTCQADLSNSA 65 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC---eEEEEcCCcH-HHHHHHHHHHHh------------ccCCceEEEEccCCCch
Confidence 5799999999999999999999986 5666655421 112221222211 01235667899999975
Q ss_pred CCC-ChhHH-H---HHhccccEEEeccccccc-------h-----------hhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 91 LGI-KDSDL-L---MLQEEVSVVFNGAASLKL-------E-----------AELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 91 ~~~-~~~~~-~---~~~~~~d~vi~~a~~~~~-------~-----------~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
.-. ..+++ . +.+.++|++|||||.... . ..+..++++|+.+++.+.+++.+
T Consensus 66 ~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 66 TLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred hhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 200 00111 1 123478999999996421 1 13667899999999999887653
No 270
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.26 E-value=5.9e-11 Score=83.93 Aligned_cols=102 Identities=22% Similarity=0.276 Sum_probs=75.2
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+|+||+|.+|+.+++.|++.++ .|.++.|+.+ .+..+.+.. .+++++.+|+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~---~V~~l~R~~~----~~~~~~l~~---------------~g~~vv~~d~~~~--- 55 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF---SVRALVRDPS----SDRAQQLQA---------------LGAEVVEADYDDP--- 55 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG---CEEEEESSSH----HHHHHHHHH---------------TTTEEEES-TT-H---
T ss_pred CEEECCccHHHHHHHHHHHhCCC---CcEEEEeccc----hhhhhhhhc---------------ccceEeecccCCH---
Confidence 78999999999999999999775 6788999752 222332221 3567789999874
Q ss_pred CChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 93 IKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 93 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+.+.+.++++|.||.+.+... ........++++++++. ++++||+.|
T Consensus 56 ---~~l~~al~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~a-gVk~~v~ss 102 (233)
T PF05368_consen 56 ---ESLVAALKGVDAVFSVTPPSH---------PSELEQQKNLIDAAKAA-GVKHFVPSS 102 (233)
T ss_dssp ---HHHHHHHTTCSEEEEESSCSC---------CCHHHHHHHHHHHHHHH-T-SEEEESE
T ss_pred ---HHHHHHHcCCceEEeecCcch---------hhhhhhhhhHHHhhhcc-ccceEEEEE
Confidence 479999999999998876543 33355667899999998 699999753
No 271
>KOG2865|consensus
Probab=99.24 E-value=2.2e-11 Score=86.93 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=91.7
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+++|-.+-|.|||||+|++++.+|.+.|. .+++.-|-.... ...+.. -....++.++..|+
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GS---QviiPyR~d~~~-----~r~lkv-----------mGdLGQvl~~~fd~ 118 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGS---QVIIPYRGDEYD-----PRHLKV-----------MGDLGQVLFMKFDL 118 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCC---eEEEeccCCccc-----hhheee-----------cccccceeeeccCC
Confidence 56778899999999999999999999995 666665543211 111111 11246788999999
Q ss_pred CCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.|++ ++++.++..++|||+.|.--...++. +.++|+.++..|++.|+++ ++.|||++|
T Consensus 119 ~Ded------SIr~vvk~sNVVINLIGrd~eTknf~-f~Dvn~~~aerlAricke~-GVerfIhvS 176 (391)
T KOG2865|consen 119 RDED------SIRAVVKHSNVVINLIGRDYETKNFS-FEDVNVHIAERLARICKEA-GVERFIHVS 176 (391)
T ss_pred CCHH------HHHHHHHhCcEEEEeeccccccCCcc-cccccchHHHHHHHHHHhh-Chhheeehh
Confidence 9854 79999999999999998643334443 7799999999999999998 899999987
No 272
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.23 E-value=3.8e-11 Score=85.60 Aligned_cols=123 Identities=24% Similarity=0.273 Sum_probs=89.2
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+|++||||-||.-|.++++.|++.|| .|+.+.|+.+..+... + .+... ......++.++.+|++|.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY---~VhGi~Rrss~~n~~r-i-~L~~~---------~~~~~~~l~l~~gDLtD~ 67 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGY---EVHGIKRRSSSFNTPR-I-HLYED---------PHLNDPRLHLHYGDLTDS 67 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCc---EEEEEeeccccCCccc-c-eeccc---------cccCCceeEEEeccccch
Confidence 68999999999999999999999998 7788888754332221 1 11111 112235689999999996
Q ss_pred CCCCChhHHHHHhc--cccEEEeccccccchhhH---HHHHHhhhHHHHHHHHHHHhcCC-CcceEecC
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGAASLKLEAEL---KENVAANTRGTQRLLDIALKMKK-LVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S 152 (152)
. .+.++++ .+|.|+|+|+.++...++ ....+++..|+.+|+++.+-.+. ..+|+..|
T Consensus 68 ~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAS 130 (345)
T COG1089 68 S------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQAS 130 (345)
T ss_pred H------HHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecc
Confidence 5 5777776 689999999988754333 34778888999999999987532 24565544
No 273
>PRK06720 hypothetical protein; Provisional
Probab=99.22 E-value=2.9e-10 Score=76.83 Aligned_cols=85 Identities=20% Similarity=0.232 Sum_probs=59.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++||||+++||.++++.|++.|+ +|++.+|+.. ...+...++.. ......++.+|++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~---~V~l~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~ 75 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQE--SGQATVEEITN-------------LGGEALFVSYDME 75 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence 5789999999999999999999999986 6777777532 11211122211 1245667899998
Q ss_pred CCCCCCChhHHHH-------HhccccEEEecccccc
Q psy11862 88 QANLGIKDSDLLM-------LQEEVSVVFNGAASLK 116 (152)
Q Consensus 88 ~~~~~~~~~~~~~-------~~~~~d~vi~~a~~~~ 116 (152)
+.+ ++.+ .+.++|++|||||...
T Consensus 76 ~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 76 KQG------DWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 854 3333 3357899999999754
No 274
>KOG1611|consensus
Probab=99.21 E-value=1.9e-10 Score=79.55 Aligned_cols=116 Identities=25% Similarity=0.252 Sum_probs=78.8
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.-+.++||||++|||..++++|++. .++..++...|++... .+.++.+.. ..++++.++.|+++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~k~~-------------~d~rvHii~Ldvt~ 65 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELALKSK-------------SDSRVHIIQLDVTC 65 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHHhhc-------------cCCceEEEEEeccc
Confidence 3467999999999999999999987 5665555555544321 333333221 14799999999998
Q ss_pred CCCCCC-hhHHHHH--hccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHH
Q psy11862 89 ANLGIK-DSDLLML--QEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIAL 140 (152)
Q Consensus 89 ~~~~~~-~~~~~~~--~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~ 140 (152)
.+.--. ..++.++ .+++|.+|+|||+... .+.+-+.+++|+.++..+.+++.
T Consensus 66 deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l 128 (249)
T KOG1611|consen 66 DESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL 128 (249)
T ss_pred HHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence 662000 1123333 2367999999997542 34566789999999988887764
No 275
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.19 E-value=7.3e-10 Score=78.90 Aligned_cols=129 Identities=20% Similarity=0.211 Sum_probs=82.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC-CcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL-SRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~ 86 (152)
+.+++++|||++++||.++++.|++.|+ .+++..|..... ..+.+..... ... ..+.+..+|+
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~---~v~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~~Dv 66 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGA---RVVVAARRSEEE-AAEALAAAIK------------EAGGGRAAAVAADV 66 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEcCCCchh-hHHHHHHHHH------------hcCCCcEEEEEecC
Confidence 5789999999999999999999998886 556666554321 1222221111 001 3577778999
Q ss_pred CC-CCCC-CChhHHHHHhccccEEEecccccc----c----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 87 LQ-ANLG-IKDSDLLMLQEEVSVVFNGAASLK----L----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 87 ~~-~~~~-~~~~~~~~~~~~~d~vi~~a~~~~----~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
++ .+.. ...+++...+.++|++|||||... . .+.++..+.+|+.+...+.+++.+....+++|++|
T Consensus 67 s~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~is 142 (251)
T COG1028 67 SDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNIS 142 (251)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEEC
Confidence 87 4310 001122233346899999999742 1 46778899999999999888554421112677665
No 276
>KOG1610|consensus
Probab=99.17 E-value=4.1e-10 Score=81.43 Aligned_cols=120 Identities=19% Similarity=0.266 Sum_probs=86.4
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
...++.|+|||+..+.|..++++|.+.|+ .|.+-.-.+.+ .+.++.... .++...+..|+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf---~V~Agcl~~~g---ae~L~~~~~--------------s~rl~t~~LDV 85 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF---RVFAGCLTEEG---AESLRGETK--------------SPRLRTLQLDV 85 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCC---EEEEEeecCch---HHHHhhhhc--------------CCcceeEeecc
Confidence 45678999999999999999999999997 55555533322 233332221 36788889999
Q ss_pred CCCCCCCChhHHHHHhc---------cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcc
Q psy11862 87 LQANLGIKDSDLLMLQE---------EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM--KKLVV 147 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~---------~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~ 147 (152)
++++ ++.+..+ +.-++|||||+... .+++...+++|+.|+.++.++..+. +.-+|
T Consensus 86 T~~e------si~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGR 159 (322)
T KOG1610|consen 86 TKPE------SVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGR 159 (322)
T ss_pred CCHH------HHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCe
Confidence 9976 4554433 45789999996542 4677789999999999988887642 13358
Q ss_pred eEecC
Q psy11862 148 SLDIG 152 (152)
Q Consensus 148 ~v~~S 152 (152)
+|++|
T Consensus 160 vVnvs 164 (322)
T KOG1610|consen 160 VVNVS 164 (322)
T ss_pred EEEec
Confidence 88875
No 277
>KOG0747|consensus
Probab=99.16 E-value=5.5e-11 Score=84.68 Aligned_cols=121 Identities=26% Similarity=0.344 Sum_probs=88.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
.+.++||||.||||++.+..+...-++. ..++++.-.-..+ .+.+.+.. ..+...++.+|+.+.
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idkL~~~s~-~~~l~~~~--------------n~p~ykfv~~di~~~ 69 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDKLDYCSN-LKNLEPVR--------------NSPNYKFVEGDIADA 69 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCC-cEEEEeecccccc-cchhhhhc--------------cCCCceEeeccccch
Confidence 3789999999999999999999884443 5556654332222 22222221 237889999999886
Q ss_pred CCCCChhHHHHHhc--cccEEEeccccccchh---hHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGAASLKLEA---ELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
. .+..++. .+|.|+|.|+..+... +.-.....|+.++..|++.+...+++++||++|
T Consensus 70 ~------~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvS 131 (331)
T KOG0747|consen 70 D------LVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVS 131 (331)
T ss_pred H------HHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEec
Confidence 5 2444443 7899999999876422 223367889999999999999988999999997
No 278
>KOG1207|consensus
Probab=99.11 E-value=1.5e-10 Score=77.29 Aligned_cols=119 Identities=21% Similarity=0.234 Sum_probs=84.4
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
.+.|+.+++||++-+||++++.+|.+.| ++|+.+.|.+. .+..+.+. .+.-+..+.+|+
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~a------~L~sLV~e------------~p~~I~Pi~~Dl 62 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNEA------NLLSLVKE------------TPSLIIPIVGDL 62 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcC---CEEEEEecCHH------HHHHHHhh------------CCcceeeeEecc
Confidence 4679999999999999999999999998 48899998643 33333221 124578889999
Q ss_pred CCCCCCCChhHHHHHhc---cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862 87 LQANLGIKDSDLLMLQE---EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S 152 (152)
++-+ .+++.+. .+|.++|+||..- ..++++..+++|+.+...+.+...+ .+-...+|.+|
T Consensus 63 s~we------a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvS 136 (245)
T KOG1207|consen 63 SAWE------ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVS 136 (245)
T ss_pred cHHH------HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEec
Confidence 8732 3444433 5799999999653 1566777889999998888777443 22234566654
No 279
>KOG1209|consensus
Probab=99.08 E-value=6.5e-10 Score=76.52 Aligned_cols=117 Identities=18% Similarity=0.191 Sum_probs=80.2
Q ss_pred CCceEEEcC-CcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 9 AGRSVLVTG-GTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 9 ~~~~ilItG-~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
..++++||| +.|+||.++++.+.+.|+ .|++..|+.+. +..+.. ..++.....|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~---~V~AtaR~~e~------M~~L~~--------------~~gl~~~kLDV~ 62 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY---LVYATARRLEP------MAQLAI--------------QFGLKPYKLDVS 62 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe---EEEEEccccch------HhhHHH--------------hhCCeeEEeccC
Confidence 357899998 678999999999999997 78888886542 222221 145778889999
Q ss_pred CCCCCCChhHHHHHh-----ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEec
Q psy11862 88 QANLGIKDSDLLMLQ-----EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDI 151 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~-----~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~ 151 (152)
+++. ...+...+ .+.|+++||||..= ..++.+..+++|+.|..+..++.... ...+.+|++
T Consensus 63 ~~~~---V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnv 137 (289)
T KOG1209|consen 63 KPEE---VVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNV 137 (289)
T ss_pred ChHH---HHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEe
Confidence 8762 11122222 25799999999642 24566778999999988887776532 123466665
No 280
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.08 E-value=1.2e-09 Score=77.74 Aligned_cols=102 Identities=24% Similarity=0.295 Sum_probs=68.5
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+||||||+||++++.+|.+.|| .|++++|++... .+.+ ...+. ..+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh---~v~iltR~~~~~--~~~~-------------------~~~v~--~~~------- 47 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH---QVTILTRRPPKA--SQNL-------------------HPNVT--LWE------- 47 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC---eEEEEEcCCcch--hhhc-------------------Ccccc--ccc-------
Confidence 68999999999999999999997 778899976521 1100 00111 111
Q ss_pred CChhHHHHHhc-cccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862 93 IKDSDLLMLQE-EVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI 151 (152)
Q Consensus 93 ~~~~~~~~~~~-~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~ 151 (152)
.+..... ++|+|||+||..-. .+..+.+.+..+..|..|.++..... .++.++.-
T Consensus 48 ----~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isa 109 (297)
T COG1090 48 ----GLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISA 109 (297)
T ss_pred ----hhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEec
Confidence 1333333 79999999996532 33445588899999999999987542 34455543
No 281
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.07 E-value=3.2e-09 Score=77.95 Aligned_cols=141 Identities=6% Similarity=-0.011 Sum_probs=74.1
Q ss_pred ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH-----HHHHHHH--hcChh---hhhhhhhccc
Q psy11862 7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP-----KARLAEF--SKLPV---FERLRKECPA 74 (152)
Q Consensus 7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~-----~~~~~~~--~~~~~---~~~~~~~~~~ 74 (152)
.+++|+++|||++ .+||+++++.|+++|+ +|++.++.+..... .+..... ...+- ...+.....
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga---~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 80 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGA---TILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA- 80 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCC---EEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhh-
Confidence 3689999999996 9999999999999996 56665432100000 0000000 00000 000000000
Q ss_pred cCCcEEEEEcccCCCC--CCCChhHH-------HHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHHH
Q psy11862 75 QLSRLHIIEGDILQAN--LGIKDSDL-------LMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLL 136 (152)
Q Consensus 75 ~~~~~~~~~~D~~~~~--~~~~~~~~-------~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~ 136 (152)
......-+..|+.+.. -.++.+++ .+.+.++|++|||||... ..+.|+..+++|+.++++++
T Consensus 81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~ 160 (299)
T PRK06300 81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL 160 (299)
T ss_pred hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 0011122223332210 00011122 233457899999997531 14677889999999999999
Q ss_pred HHHHhc-CCCcceEec
Q psy11862 137 DIALKM-KKLVVSLDI 151 (152)
Q Consensus 137 ~~~~~~-~~~~~~v~~ 151 (152)
+++.+. ..-.+++++
T Consensus 161 ~a~~p~m~~~G~ii~i 176 (299)
T PRK06300 161 SHFGPIMNPGGSTISL 176 (299)
T ss_pred HHHHHHhhcCCeEEEE
Confidence 998763 122456654
No 282
>KOG1014|consensus
Probab=99.06 E-value=1.4e-09 Score=78.54 Aligned_cols=124 Identities=23% Similarity=0.263 Sum_probs=83.6
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
++=++|||||.+||++.+++|+++|. +|++++|+++ .+...-.++... ...++.++..|++++
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~---nvvLIsRt~~--KL~~v~kEI~~~------------~~vev~~i~~Dft~~ 111 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGF---NVVLISRTQE--KLEAVAKEIEEK------------YKVEVRIIAIDFTKG 111 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHHH------------hCcEEEEEEEecCCC
Confidence 36799999999999999999999997 6899999754 222221222211 135788999999886
Q ss_pred CCCCChhHHHHHhc--cccEEEecccccc-c--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGAASLK-L--------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~-~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S 152 (152)
.. .-+.+++.+. .+-++|||+|... . ....++.+.+|+.++..+.+..... .+.+-+|++|
T Consensus 112 ~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~Ivnig 186 (312)
T KOG1014|consen 112 DE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIG 186 (312)
T ss_pred ch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEec
Confidence 52 1233444444 4568999999765 1 2244567888999988888877642 1234556553
No 283
>KOG1210|consensus
Probab=98.97 E-value=9.6e-09 Score=74.40 Aligned_cols=120 Identities=21% Similarity=0.221 Sum_probs=83.1
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++||||+.++|.+++..+..+|. .|.+..|+.. .+.+...++.. .+...++.+..+|+.+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga---~Vti~ar~~~--kl~~a~~~l~l-----------~~~~~~v~~~S~d~~~Y~ 97 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGA---DVTITARSGK--KLLEAKAELEL-----------LTQVEDVSYKSVDVIDYD 97 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccC---ceEEEeccHH--HHHHHHhhhhh-----------hhccceeeEeccccccHH
Confidence 5899999999999999999999996 5677777643 22222222211 111234779999997755
Q ss_pred CCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CC---CcceEecC
Q psy11862 91 LGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KK---LVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~---~~~~v~~S 152 (152)
++...++ .+|.+|+|||..- .....+..+++|+.++.+.++++... .. ..+++.+|
T Consensus 98 ------~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vs 171 (331)
T KOG1210|consen 98 ------SVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVS 171 (331)
T ss_pred ------HHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEeh
Confidence 3443333 5799999999542 25667779999999999999887643 11 23666654
No 284
>KOG1199|consensus
Probab=98.95 E-value=1.3e-09 Score=72.82 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=81.4
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
.+.++-..+||||.+++|++.++.|.++|. .+.+++-..+.. .+...+ .+.++.+.+.|
T Consensus 5 rs~kglvalvtggasglg~ataerlakqga---sv~lldlp~skg--~~vake----------------lg~~~vf~pad 63 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQGA---SVALLDLPQSKG--ADVAKE----------------LGGKVVFTPAD 63 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcCc---eEEEEeCCcccc--hHHHHH----------------hCCceEEeccc
Confidence 356788999999999999999999999985 667777654432 111112 14788999999
Q ss_pred cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHH
Q psy11862 86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIAL 140 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~ 140 (152)
++++. ++...+ .+.|..+||||+.- ..++++..+++|+.++++++++..
T Consensus 64 vtsek------dv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 64 VTSEK------DVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred cCcHH------HHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 98854 554443 47899999999642 256788889999999999998864
No 285
>KOG4039|consensus
Probab=98.92 E-value=7.3e-09 Score=69.41 Aligned_cols=115 Identities=20% Similarity=0.154 Sum_probs=87.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
|+++..+|.||+|-.|..+++.+.+.+ ...+|+++.|++... +.....+.....|+.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~-~FSKV~~i~RR~~~d----------------------~at~k~v~q~~vDf~ 72 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAP-QFSKVYAILRRELPD----------------------PATDKVVAQVEVDFS 72 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcc-cceeEEEEEeccCCC----------------------ccccceeeeEEechH
Confidence 678899999999999999999999984 678999999975322 112345666677775
Q ss_pred CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
. .+++...+.++|+.+.+-|.+....-.+-++++.-+....+++++++. ++++|+++|
T Consensus 73 K------l~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvS 130 (238)
T KOG4039|consen 73 K------LSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVS 130 (238)
T ss_pred H------HHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEe
Confidence 5 335666777999999998876543334556777777888888888886 899999886
No 286
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.91 E-value=3.8e-08 Score=72.76 Aligned_cols=119 Identities=11% Similarity=-0.029 Sum_probs=82.9
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
..++++|.|+|++|.+|..++..|...+ -...+.++++........ ++... ... ....+.
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~~~~g~a~-Dl~~~----------------~~~--~~v~~~ 64 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIVGAPGVAA-DLSHI----------------DTP--AKVTGY 64 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecCCCccccc-chhhc----------------CcC--ceEEEe
Confidence 3577899999999999999999988664 234788888732111111 11100 111 122344
Q ss_pred CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
+++. ++.+.++++|+||+++|.... ..++.+.+..|+..+.++++++.+. +++++|+++
T Consensus 65 td~~------~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~ 124 (321)
T PTZ00325 65 ADGE------LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIV 124 (321)
T ss_pred cCCC------chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 4433 356778899999999998654 3567889999999999999999998 677877653
No 287
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.5e-08 Score=71.68 Aligned_cols=106 Identities=21% Similarity=0.271 Sum_probs=74.9
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++++||||||++|++++++|++.|+ .|.+.+|++... ..+ ...+.+..+|+.++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~---~v~~~~r~~~~~------~~~----------------~~~v~~~~~d~~~~~ 55 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH---EVRAAVRNPEAA------AAL----------------AGGVEVVLGDLRDPK 55 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC---EEEEEEeCHHHH------Hhh----------------cCCcEEEEeccCCHh
Confidence 4799999999999999999999986 778888875421 110 156888899999866
Q ss_pred CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
.+...+++.+.++++.+... ... ...........+..+.+. . ..++++++|
T Consensus 56 ------~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s 106 (275)
T COG0702 56 ------SLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG-A-GVKHGVSLS 106 (275)
T ss_pred ------HHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc-C-CceEEEEec
Confidence 58888999999999887654 333 234444555555555554 2 345555543
No 288
>KOG1478|consensus
Probab=98.87 E-value=2e-08 Score=70.93 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=82.9
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCC-CCc-EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCP-DIG-KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~-~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
-|.++|||+++++|.+|+.+|++... +++ .+++.+|+-+ .+++.+..+... .+...-++.++..|++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~--kae~vc~~lk~f---------~p~~~i~~~yvlvD~s 71 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMS--KAEAVCAALKAF---------HPKSTIEVTYVLVDVS 71 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChh--HHHHHHHHHHHh---------CCCceeEEEEEEEehh
Confidence 46899999999999999999988633 232 2333344332 444444444332 1222357889999998
Q ss_pred CCCCCCC-hhHHHHHhccccEEEeccccccc----------------------------------hhhHHHHHHhhhHHH
Q psy11862 88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL----------------------------------EAELKENVAANTRGT 132 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~----------------------------------~~~~~~~~~~n~~~~ 132 (152)
+-..-.+ -.++.+-+++.|.|+-|||.... .+.+..+++.|+.|.
T Consensus 72 Nm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGh 151 (341)
T KOG1478|consen 72 NMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGH 151 (341)
T ss_pred hHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccch
Confidence 8431000 11334445578999999987531 345566789999999
Q ss_pred HHHHHHHHhc---CCCcceEecC
Q psy11862 133 QRLLDIALKM---KKLVVSLDIG 152 (152)
Q Consensus 133 ~~l~~~~~~~---~~~~~~v~~S 152 (152)
+.+++...+. +.-..+|.+|
T Consensus 152 fyli~~l~pll~~~~~~~lvwtS 174 (341)
T KOG1478|consen 152 FYLIRELEPLLCHSDNPQLVWTS 174 (341)
T ss_pred hhhHhhhhhHhhcCCCCeEEEEe
Confidence 9988877642 1223666665
No 289
>KOG1431|consensus
Probab=98.80 E-value=1.4e-08 Score=70.70 Aligned_cols=99 Identities=19% Similarity=0.196 Sum_probs=73.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++|+|||++|.+|++|.+.+.++|.+-...+..+. -.+|+++.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------------------kd~DLt~~ 44 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------------------KDADLTNL 44 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------------------ccccccch
Confidence 479999999999999999999998753223333221 14688775
Q ss_pred CCCCChhHHHHHhc--cccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
+ +.+++++ ++..|||+|+.... ....-++++.|+.---|++..|.+. ++++++++
T Consensus 45 a------~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsc 105 (315)
T KOG1431|consen 45 A------DTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSC 105 (315)
T ss_pred H------HHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhh
Confidence 4 5777776 78999999987652 3444558899999999999999887 67666543
No 290
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.79 E-value=3.7e-08 Score=69.91 Aligned_cols=117 Identities=17% Similarity=0.157 Sum_probs=76.5
Q ss_pred CCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCCC
Q psy11862 17 GGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIK 94 (152)
Q Consensus 17 G~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 94 (152)
|++ ++||++++++|+++|+ +|++.+|+.. +..+.+.++... ....++.+|+++++.--.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga---~V~~~~~~~~--~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~v~~ 61 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGA---NVILTDRNEE--KLADALEELAKE--------------YGAEVIQCDLSDEESVEA 61 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTE---EEEEEESSHH--HHHHHHHHHHHH--------------TTSEEEESCTTSHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHHHHHH--------------cCCceEeecCcchHHHHH
Confidence 566 9999999999999995 7888888644 223334433221 112359999998651000
Q ss_pred -hhHHHHHh-ccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 95 -DSDLLMLQ-EEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 95 -~~~~~~~~-~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
.+.+.+.+ .++|++||+++.... .+.+...+++|+.++..+++++.+. ..-.++|++|
T Consensus 62 ~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~is 133 (241)
T PF13561_consen 62 LFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINIS 133 (241)
T ss_dssp HHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccc
Confidence 11223335 678999999986542 3567778999999999999988652 1124566553
No 291
>PLN00106 malate dehydrogenase
Probab=98.73 E-value=2.4e-07 Score=68.58 Aligned_cols=114 Identities=14% Similarity=0.026 Sum_probs=78.6
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
.+|.|+|++|.+|..++..|...+ -+..++++++.+ ......++... .... ...++.+..
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~-~~g~a~Dl~~~----------------~~~~--~i~~~~~~~ 78 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIAN-TPGVAADVSHI----------------NTPA--QVRGFLGDD 78 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCC-CCeeEchhhhC----------------CcCc--eEEEEeCCC
Confidence 589999999999999999998764 335788888755 11101111110 0111 112322221
Q ss_pred CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
++...++++|+|||+||.... ..++.+.+..|+..+.++.+.+.+. +++.++++
T Consensus 79 ------d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aiviv 133 (323)
T PLN00106 79 ------QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNI 133 (323)
T ss_pred ------CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 367788999999999998654 4678889999999999999999987 56666554
No 292
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.72 E-value=2.7e-07 Score=68.53 Aligned_cols=109 Identities=17% Similarity=0.066 Sum_probs=70.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCC----CCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE-EEEcc
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCP----DIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH-IIEGD 85 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D 85 (152)
.+++|||++|++|.+++..|+..+. .-..++++++.+....+.....++ .+.. ....|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl-----------------~d~~~~~~~~ 65 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL-----------------QDCAFPLLKS 65 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh-----------------hhccccccCC
Confidence 3699999999999999999988642 012788888854311010000000 0000 11123
Q ss_pred cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
+.... ++.+.++++|+|||+||.... .++..++++.|+.-...+.....+.
T Consensus 66 ~~~~~------~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 66 VVATT------DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred ceecC------CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 32222 466777899999999998654 3456779999999999998888776
No 293
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.70 E-value=1.4e-07 Score=64.20 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=62.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++||||+|++| .+++.|++.|+ .|.+.+|++. ....+.. ..+ ....+.++.+|+.|++
T Consensus 1 m~vlVtGGtG~gg-~la~~L~~~G~---~V~v~~R~~~------~~~~l~~---------~l~-~~~~i~~~~~Dv~d~~ 60 (177)
T PRK08309 1 MHALVIGGTGMLK-RVSLWLCEKGF---HVSVIARREV------KLENVKR---------EST-TPESITPLPLDYHDDD 60 (177)
T ss_pred CEEEEECcCHHHH-HHHHHHHHCcC---EEEEEECCHH------HHHHHHH---------Hhh-cCCcEEEEEccCCCHH
Confidence 4799999997665 59999999997 5666777532 1111110 000 0246788899999865
Q ss_pred CCCChhHHHHHhc-------cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCc----ceEec
Q psy11862 91 LGIKDSDLLMLQE-------EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLV----VSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~v~~ 151 (152)
++.++++ ++|.+|+. +++.++.++.++|++. +++ +|+++
T Consensus 61 ------sv~~~i~~~l~~~g~id~lv~~---------------vh~~~~~~~~~~~~~~-gv~~~~~~~~h~ 110 (177)
T PRK08309 61 ------ALKLAIKSTIEKNGPFDLAVAW---------------IHSSAKDALSVVCREL-DGSSETYRLFHV 110 (177)
T ss_pred ------HHHHHHHHHHHHcCCCeEEEEe---------------ccccchhhHHHHHHHH-ccCCCCceEEEE
Confidence 4554443 45666643 3344667788888876 555 66653
No 294
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.65 E-value=5.3e-07 Score=60.88 Aligned_cols=103 Identities=15% Similarity=0.188 Sum_probs=74.0
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+|.|.|++|-+|+.|+++..++|| .|.+++|++.... ..+.+..++.|+.++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH---eVTAivRn~~K~~-----------------------~~~~~~i~q~Difd~~ 54 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH---EVTAIVRNASKLA-----------------------ARQGVTILQKDIFDLT 54 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC---eeEEEEeChHhcc-----------------------ccccceeecccccChh
Confidence 5889999999999999999999998 5688888765211 1256778899999966
Q ss_pred CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
.+.+.+.+.|+||..-+... +.+. .........|++..+.. ++.|++.+
T Consensus 55 ------~~a~~l~g~DaVIsA~~~~~-~~~~----~~~~k~~~~li~~l~~a-gv~RllVV 103 (211)
T COG2910 55 ------SLASDLAGHDAVISAFGAGA-SDND----ELHSKSIEALIEALKGA-GVPRLLVV 103 (211)
T ss_pred ------hhHhhhcCCceEEEeccCCC-CChh----HHHHHHHHHHHHHHhhc-CCeeEEEE
Confidence 57788889999998766542 1111 11223356677777776 56677655
No 295
>PRK09620 hypothetical protein; Provisional
Probab=98.61 E-value=2.6e-07 Score=65.31 Aligned_cols=80 Identities=25% Similarity=0.373 Sum_probs=51.7
Q ss_pred cCCceEEEcCCc----------------chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862 8 YAGRSVLVTGGT----------------GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71 (152)
Q Consensus 8 ~~~~~ilItG~~----------------G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (152)
++|++++||+|. |++|++++++|+++|+ .|+++++...... ..+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga---~V~li~g~~~~~~--~~~--------------- 60 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA---HVIYLHGYFAEKP--NDI--------------- 60 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC---eEEEEeCCCcCCC--ccc---------------
Confidence 468999999886 9999999999999997 5565554321100 000
Q ss_pred ccccCCcEEEEEc--ccCCCCCCCChhHHHHHhc--cccEEEeccccccc
Q psy11862 72 CPAQLSRLHIIEG--DILQANLGIKDSDLLMLQE--EVSVVFNGAASLKL 117 (152)
Q Consensus 72 ~~~~~~~~~~~~~--D~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~ 117 (152)
+ ....+..+.+ |+.+ .+.+.+. ++|+|||+||..++
T Consensus 61 -~-~~~~~~~V~s~~d~~~--------~l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 61 -N-NQLELHPFEGIIDLQD--------KMKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred -C-CceeEEEEecHHHHHH--------HHHHHhcccCCCEEEECccccce
Confidence 0 0112333444 3322 4666664 68999999998775
No 296
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.56 E-value=5.3e-07 Score=63.82 Aligned_cols=75 Identities=23% Similarity=0.244 Sum_probs=46.6
Q ss_pred EEc-CCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 14 LVT-GGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 14 lIt-G~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
.|| .++|++|.+++++|+++|+ .|+++.|..... +.....+.++.++..+..
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G~---~V~li~r~~~~~----------------------~~~~~~v~~i~v~s~~~m-- 71 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAGH---EVTLVTTKTAVK----------------------PEPHPNLSIIEIENVDDL-- 71 (229)
T ss_pred eecCccchHHHHHHHHHHHhCCC---EEEEEECccccc----------------------CCCCCCeEEEEEecHHHH--
Confidence 344 3688899999999999997 667776643210 000134555554332210
Q ss_pred CChhHHHHHhccccEEEeccccccc
Q psy11862 93 IKDSDLLMLQEEVSVVFNGAASLKL 117 (152)
Q Consensus 93 ~~~~~~~~~~~~~d~vi~~a~~~~~ 117 (152)
.+.+.+.++++|++||+||..++
T Consensus 72 --~~~l~~~~~~~DivIh~AAvsd~ 94 (229)
T PRK06732 72 --LETLEPLVKDHDVLIHSMAVSDY 94 (229)
T ss_pred --HHHHHHHhcCCCEEEeCCccCCc
Confidence 12355566789999999998763
No 297
>KOG1203|consensus
Probab=98.52 E-value=4.6e-07 Score=68.52 Aligned_cols=122 Identities=25% Similarity=0.274 Sum_probs=75.4
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
...+.++|+|+||+|.+|+-+++.|+++|+ .|.++.|+.... .+.+. . .........+..+
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf---~vra~VRd~~~a--~~~~~-~-------------~~~d~~~~~v~~~ 135 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGF---SVRALVRDEQKA--EDLLG-V-------------FFVDLGLQNVEAD 135 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCC---eeeeeccChhhh--hhhhc-c-------------cccccccceeeec
Confidence 345678999999999999999999999997 668888864421 11111 0 0001222233333
Q ss_pred cCCCCCCCChhHHHHHhc----cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 86 ILQANLGIKDSDLLMLQE----EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
..... +.+..+.+ ...+++-+++.....++...-+.+...++.+++++|+.+ +++|++++|
T Consensus 136 ~~~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~ 200 (411)
T KOG1203|consen 136 VVTAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVG 200 (411)
T ss_pred ccccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEE
Confidence 32221 12333333 234666666543322223334578899999999999988 899999875
No 298
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.45 E-value=5.2e-07 Score=64.15 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=65.4
Q ss_pred HHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCCChhHHHHHhc--
Q psy11862 26 LLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQE-- 103 (152)
Q Consensus 26 l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 103 (152)
+++.|+++|+ +|++++|+.... ....++.+|+++.+ ++.++++
T Consensus 1 ~a~~l~~~G~---~Vv~~~r~~~~~--------------------------~~~~~~~~Dl~~~~------~v~~~~~~~ 45 (241)
T PRK12428 1 TARLLRFLGA---RVIGVDRREPGM--------------------------TLDGFIQADLGDPA------SIDAAVAAL 45 (241)
T ss_pred ChHHHHhCCC---EEEEEeCCcchh--------------------------hhhHhhcccCCCHH------HHHHHHHHh
Confidence 4678889886 678888864311 01124578998854 4555554
Q ss_pred --cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 104 --EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 104 --~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
++|++||+||... ..++...+++|+.++..+++++.+. ...+++|++|
T Consensus 46 ~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~is 96 (241)
T PRK12428 46 PGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVA 96 (241)
T ss_pred cCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeC
Confidence 6899999999753 4568889999999999999998763 1235888876
No 299
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.45 E-value=1.3e-06 Score=65.79 Aligned_cols=91 Identities=20% Similarity=0.162 Sum_probs=55.3
Q ss_pred CCceEEEcCCcchhHHH--HHHHHHhhCCCCcEEEEeecCCCCCC---------HHHHHHHHhcChhhhhhhhhccccCC
Q psy11862 9 AGRSVLVTGGTGFMGKV--LLEKLLRSCPDIGKVYILCRAKRGLT---------PKARLAEFSKLPVFERLRKECPAQLS 77 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~--l~~~l~~~g~~~~~v~~~~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (152)
.+|+++|||+++++|.+ ++++| ..|. .++++++...... ..+.+.+.. ...+.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA---~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a------------~~~G~ 103 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGA---DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFA------------KAAGL 103 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCC---eEEEEecCcchhhhcccccccchHHHHHHHH------------HhcCC
Confidence 45899999999999999 89999 8885 5566664321110 011122111 11124
Q ss_pred cEEEEEcccCCCCCCCC-hhHHHHHhccccEEEeccccc
Q psy11862 78 RLHIIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASL 115 (152)
Q Consensus 78 ~~~~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~ 115 (152)
.+..+.+|+++++.--. .+.+.+.+.++|++||++|..
T Consensus 104 ~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 104 YAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 56788999998652000 112233334789999999976
No 300
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.45 E-value=4.6e-06 Score=61.97 Aligned_cols=112 Identities=18% Similarity=0.103 Sum_probs=73.3
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+|.|+|++|.+|..++..|...+. +. .++++++.+.. ........|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~~~---------------------------~~~~g~~~Dl 53 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPPAM---------------------------KALEGVVMEL 53 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCCcc---------------------------Cccceeeeeh
Confidence 689999999999999999887643 22 37888875421 0111223333
Q ss_pred CCCCCCCC-----hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862 87 LQANLGIK-----DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI 151 (152)
Q Consensus 87 ~~~~~~~~-----~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~ 151 (152)
.+...... ..+..+.++++|+|||+||.... .++..+.+..|+.-...+.....+.. .-..++.+
T Consensus 54 ~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivv 125 (323)
T cd00704 54 QDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVV 125 (323)
T ss_pred hhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 33210000 01356777899999999998654 45677789999999999998888762 22344444
No 301
>PRK05086 malate dehydrogenase; Provisional
Probab=98.42 E-value=6.3e-06 Score=60.98 Aligned_cols=115 Identities=17% Similarity=0.138 Sum_probs=72.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++|.|++|.+|.+++..|.........+.+++|++... ...++ + .. ......+.+ . +.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~--g~alD-l---------~~-----~~~~~~i~~-~-~~- 60 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP--GVAVD-L---------SH-----IPTAVKIKG-F-SG- 60 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc--ceehh-h---------hc-----CCCCceEEE-e-CC-
Confidence 5899999999999999998855311234667777753211 00000 0 00 010111222 1 11
Q ss_pred CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
+++.+.++++|+||.++|.... ..+..+.+..|......+++...+. +++++|.+
T Consensus 61 -----~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~iviv 116 (312)
T PRK05086 61 -----EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGI 116 (312)
T ss_pred -----CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1355666889999999998653 3456678999999999999999987 56665543
No 302
>KOG1372|consensus
Probab=98.36 E-value=1.7e-06 Score=61.29 Aligned_cols=116 Identities=25% Similarity=0.288 Sum_probs=82.0
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
..+.+||||-+|--|++++.-|+..|| .|+.+.|+.+.-+ ..++..+.... ..........+.+|++|
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgY---eVHGiiRRsSsFN-T~RIeHlY~nP--------~~h~~~~mkLHYgDmTD 94 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGY---EVHGIIRRSSSFN-TARIEHLYSNP--------HTHNGASMKLHYGDMTD 94 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCc---eeeEEEeeccccc-hhhhhhhhcCc--------hhcccceeEEeeccccc
Confidence 446899999999999999999999998 6677777655321 23444333221 11234677889999999
Q ss_pred CCCCCChhHHHHHhc--cccEEEeccccccchh--h-HHHHHHhhhHHHHHHHHHHHhc
Q psy11862 89 ANLGIKDSDLLMLQE--EVSVVFNGAASLKLEA--E-LKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~~--~-~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
.. .+.+++. .++-|+|+|+.++..- + .+..-++...|+.+|+++.+.+
T Consensus 95 ss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c 147 (376)
T KOG1372|consen 95 SS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRAC 147 (376)
T ss_pred hH------HHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhc
Confidence 76 3677766 6799999999877421 1 2225567778899999988765
No 303
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.36 E-value=1.6e-06 Score=66.08 Aligned_cols=79 Identities=22% Similarity=0.217 Sum_probs=52.9
Q ss_pred cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862 8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71 (152)
Q Consensus 8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (152)
+++++++|||| +|.+|.+++++|.++|+ .|++++++....
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga---~V~~v~~~~~~~--------------------- 241 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA---DVTLVSGPVNLP--------------------- 241 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC---EEEEeCCCcccc---------------------
Confidence 68999999999 78899999999999996 667777643210
Q ss_pred ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862 72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL 117 (152)
Q Consensus 72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~ 117 (152)
.+.. +...|+++.+- -.+.+.+.++++|++||+||..++
T Consensus 242 ---~~~~--~~~~dv~~~~~--~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 242 ---TPAG--VKRIDVESAQE--MLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred ---CCCC--cEEEccCCHHH--HHHHHHHhcCCCCEEEEccccccc
Confidence 0111 23457766330 011223334578999999998763
No 304
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.32 E-value=1.4e-05 Score=55.95 Aligned_cols=116 Identities=10% Similarity=0.070 Sum_probs=71.6
Q ss_pred ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.++||+++|+|- ...|++.|++.|.++|. ++...-. .+.+..++.++.+. .....+++|
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA---eL~fTy~---~e~l~krv~~la~~-------------~~s~~v~~c 63 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGA---ELAFTYQ---GERLEKRVEELAEE-------------LGSDLVLPC 63 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCC---EEEEEec---cHHHHHHHHHHHhh-------------ccCCeEEec
Confidence 378999999994 56799999999999996 4433222 22455555554321 123557899
Q ss_pred ccCCCCC-CCChhHHHHHhccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862 85 DILQANL-GIKDSDLLMLQEEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALK 141 (152)
Q Consensus 85 D~~~~~~-~~~~~~~~~~~~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~ 141 (152)
|+++.+. ....+++.+...++|.++|+-|+... .+.+...+++..-+...+.+++++
T Consensus 64 DV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~ 132 (259)
T COG0623 64 DVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARP 132 (259)
T ss_pred CCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHH
Confidence 9998651 00012233333478999999997652 233333455555556666666654
No 305
>KOG1204|consensus
Probab=98.32 E-value=1.1e-06 Score=61.25 Aligned_cols=122 Identities=19% Similarity=0.145 Sum_probs=69.3
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.++.+++||++.+||..++..+...+.++ .++...|..... .. ..-..........+|++.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~~------~~------------L~v~~gd~~v~~~g~~~e 65 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAEL------EG------------LKVAYGDDFVHVVGDITE 65 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhcccccc------cc------------eEEEecCCcceechHHHH
Confidence 35789999999999988888887775432 223222322110 00 000001222233344433
Q ss_pred CCCCCChhHHHHHhc----cccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHhc-C-C--CcceEe
Q psy11862 89 ANLGIKDSDLLMLQE----EVSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALKM-K-K--LVVSLD 150 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~----~~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~-~-~--~~~~v~ 150 (152)
... .+++.++.+ ..|.||||||.... ...|+..++.|+.+...|...+.+. . . .+-+|+
T Consensus 66 ~~~---l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVn 142 (253)
T KOG1204|consen 66 EQL---LGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVN 142 (253)
T ss_pred HHH---HHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEE
Confidence 221 122222222 56999999997542 4667889999999998887776542 1 1 255677
Q ss_pred cC
Q psy11862 151 IG 152 (152)
Q Consensus 151 ~S 152 (152)
+|
T Consensus 143 vS 144 (253)
T KOG1204|consen 143 VS 144 (253)
T ss_pred ec
Confidence 65
No 306
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.30 E-value=1.8e-05 Score=58.89 Aligned_cols=112 Identities=19% Similarity=0.145 Sum_probs=73.1
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+|.|+|++|.+|..++..|...+. +. .++++++.+... ....+..|+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~~---------------------------~a~g~~~Dl 52 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAMK---------------------------VLEGVVMEL 52 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCccc---------------------------ccceeEeeh
Confidence 478999999999999999987543 11 478888754311 112223333
Q ss_pred CCCCCCCC-----hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862 87 LQANLGIK-----DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI 151 (152)
Q Consensus 87 ~~~~~~~~-----~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~ 151 (152)
.+...... ..+....+.++|+||++||.... .++..+.+..|+.-...+.....+.. .-..++.+
T Consensus 53 ~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivv 124 (324)
T TIGR01758 53 MDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVV 124 (324)
T ss_pred hcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 33221000 00235667899999999998654 34578899999999999999988862 22344444
No 307
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.28 E-value=3.1e-06 Score=63.01 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=32.6
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
.+++++++||||+|++|+.++++|... .++..++++.|+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~ 190 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQ 190 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCC
Confidence 467899999999999999999999865 234688888875
No 308
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.25 E-value=6.5e-06 Score=60.31 Aligned_cols=85 Identities=9% Similarity=0.077 Sum_probs=54.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
+++++++|+|+ |++|++++..|.+.|. .+|+++.|+... ....+..+++.. ....+.....|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~l~~-------------~~~~~~~~~~d~ 187 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEKIKQ-------------EVPECIVNVYDL 187 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHHHhh-------------cCCCceeEEech
Confidence 46789999998 7999999999999876 568888886421 111221112111 012344455677
Q ss_pred CCCCCCCChhHHHHHhccccEEEecccc
Q psy11862 87 LQANLGIKDSDLLMLQEEVSVVFNGAAS 114 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 114 (152)
.+.+ ++...+...|++||+-..
T Consensus 188 ~~~~------~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 188 NDTE------KLKAEIASSDILVNATLV 209 (289)
T ss_pred hhhh------HHHhhhccCCEEEEeCCC
Confidence 6533 466667788999998743
No 309
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.24 E-value=5.7e-06 Score=57.03 Aligned_cols=82 Identities=22% Similarity=0.249 Sum_probs=53.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|+||+|++|+.+++.|.+.|+ +|.+++|+.. +.+.+.. .+.. ........+|..
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~---~V~l~~R~~~------~~~~l~~-----~l~~-----~~~~~~~~~~~~ 86 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDLE------RAQKAAD-----SLRA-----RFGEGVGAVETS 86 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHHHH-----HHHh-----hcCCcEEEeeCC
Confidence 5778999999999999999999999874 6777777532 2222111 0000 012233445655
Q ss_pred CCCCCCChhHHHHHhccccEEEecccc
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAAS 114 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~ 114 (152)
+. +++...+.++|+||++...
T Consensus 87 ~~------~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 87 DD------AARAAAIKGADVVFAAGAA 107 (194)
T ss_pred CH------HHHHHHHhcCCEEEECCCC
Confidence 53 3567777889999887653
No 310
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.22 E-value=1.4e-05 Score=60.40 Aligned_cols=79 Identities=27% Similarity=0.396 Sum_probs=60.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++++|.|+ |++|+.++..|++.|. ..|++.+|+.. .+.++... ...+++....|+.+.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~------~~~~i~~~------------~~~~v~~~~vD~~d~ 59 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKE------KCARIAEL------------IGGKVEALQVDAADV 59 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHH------HHHHHHhh------------ccccceeEEecccCh
Confidence 478999998 9999999999999863 58899998743 22222111 124788999999986
Q ss_pred CCCCChhHHHHHhccccEEEeccccc
Q psy11862 90 NLGIKDSDLLMLQEEVSVVFNGAASL 115 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~vi~~a~~~ 115 (152)
. .+.+++++.|+|||++...
T Consensus 60 ~------al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 60 D------ALVALIKDFDLVINAAPPF 79 (389)
T ss_pred H------HHHHHHhcCCEEEEeCCch
Confidence 5 6888999899999998654
No 311
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.14 E-value=2.4e-05 Score=59.45 Aligned_cols=78 Identities=22% Similarity=0.296 Sum_probs=54.0
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|+|.|+ |++|+.+++.|++.+ ...+|.+.+|+.. +++.+... ....++..+..|+.|.+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~------~~~~~~~~-----------~~~~~~~~~~~d~~~~~-- 59 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE------KAERLAEK-----------LLGDRVEAVQVDVNDPE-- 59 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH------HHHHHHT-------------TTTTEEEEE--TTTHH--
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH------HHHHHHhh-----------ccccceeEEEEecCCHH--
Confidence 689999 999999999999985 3337888888632 33322210 02478999999998854
Q ss_pred CChhHHHHHhccccEEEeccccc
Q psy11862 93 IKDSDLLMLQEEVSVVFNGAASL 115 (152)
Q Consensus 93 ~~~~~~~~~~~~~d~vi~~a~~~ 115 (152)
++.+++++.|+|||+++..
T Consensus 60 ----~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 60 ----SLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp ----HHHHHHTTSSEEEE-SSGG
T ss_pred ----HHHHHHhcCCEEEECCccc
Confidence 6899999999999999865
No 312
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.09 E-value=0.00042 Score=45.45 Aligned_cols=116 Identities=14% Similarity=0.154 Sum_probs=73.5
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++|.|+|++|.+|++++..|...+. +.+++++++.+. .+.-...+ +................+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-~~ei~L~D~~~~--~~~g~a~D---------l~~~~~~~~~~~~i~~~~----- 63 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-ADEIVLIDINED--KAEGEALD---------LSHASAPLPSPVRITSGD----- 63 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-SSEEEEEESSHH--HHHHHHHH---------HHHHHHGSTEEEEEEESS-----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCceEEeccCcc--cceeeehh---------hhhhhhhccccccccccc-----
Confidence 5899999999999999999988853 467999987532 11111111 111111111222222222
Q ss_pred CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
.+.++++|+||-++|.... .++..++++.|..-...+.+...+...-..++.+
T Consensus 64 --------~~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivv 117 (141)
T PF00056_consen 64 --------YEALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVV 117 (141)
T ss_dssp --------GGGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-
T ss_pred --------ccccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEe
Confidence 2244689999999997543 4567778899999999999998886322344443
No 313
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.06 E-value=6e-06 Score=58.40 Aligned_cols=29 Identities=28% Similarity=0.513 Sum_probs=22.5
Q ss_pred EEcC-CcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 14 LVTG-GTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 14 lItG-~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
.||. ++|++|.+++++|+++|+ .|+++++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga---~Vvlv~~ 47 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGH---EVTLVTT 47 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCC---EEEEEcC
Confidence 3444 589999999999999997 5555554
No 314
>KOG2774|consensus
Probab=97.93 E-value=8.3e-06 Score=57.45 Aligned_cols=109 Identities=25% Similarity=0.212 Sum_probs=72.1
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
-.+++|||+-|-+|..++..|..+ ++-..|++.+-.+.+.+. ...-.++..|+.|.
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~~V-----------------------~~~GPyIy~DILD~ 99 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPANV-----------------------TDVGPYIYLDILDQ 99 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCchhh-----------------------cccCCchhhhhhcc
Confidence 468999999999999999988776 332344443322221111 11123556788775
Q ss_pred CCCCChhHHHHHh--ccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceE
Q psy11862 90 NLGIKDSDLLMLQ--EEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSL 149 (152)
Q Consensus 90 ~~~~~~~~~~~~~--~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v 149 (152)
. .+++.+ .++|-+||..+..+. +.+..-...+|+.|..|+++.+++. +.+-||
T Consensus 100 K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV 156 (366)
T KOG2774|consen 100 K------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV 156 (366)
T ss_pred c------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee
Confidence 4 366554 378999999876542 3334446789999999999999987 554443
No 315
>KOG4288|consensus
Probab=97.86 E-value=3.6e-05 Score=54.00 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=78.6
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
...++.|+.|+.|.++++.-...++ .|..+.|+.... .+ ..+...+.++.+|.....
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~---svgilsen~~k~----~l----------------~sw~~~vswh~gnsfssn 109 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVH---SVGILSENENKQ----TL----------------SSWPTYVSWHRGNSFSSN 109 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhce---eeeEeecccCcc----hh----------------hCCCcccchhhccccccC
Confidence 4678889999999999999999886 566777765411 11 123467888888876654
Q ss_pred CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG 152 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 152 (152)
. +.....++..++.+++... +...+.++|=+.-.+..+++++. ++++|+|+|
T Consensus 110 ~------~k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~~-gv~~fvyIS 161 (283)
T KOG4288|consen 110 P------NKLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAKA-GVPRFVYIS 161 (283)
T ss_pred c------chhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHHc-CCceEEEEE
Confidence 2 4555567788887776442 34446677777777888889887 899999987
No 316
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.83 E-value=0.00048 Score=51.28 Aligned_cols=118 Identities=18% Similarity=0.067 Sum_probs=72.1
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
++|.|+|++|.+|..++..|+..+. +. .+++++..+....+.-..-+ +..........+.
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~D---------l~~~~~~~~~~~~----- 67 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAME---------LEDCAFPLLAEIV----- 67 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeehh---------hhhccccccCceE-----
Confidence 5899999999999999999987643 34 68888875432111000000 0000000001111
Q ss_pred cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCC-CcceEec
Q psy11862 86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKK-LVVSLDI 151 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~ 151 (152)
+.. +....++++|+||.+||.... .++..+.+..|+.-...+.....+... -..++.+
T Consensus 68 i~~--------~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivv 127 (322)
T cd01338 68 ITD--------DPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVV 127 (322)
T ss_pred Eec--------CcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 111 134556899999999997653 346677899999999999999887632 2344444
No 317
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.82 E-value=7.3e-05 Score=56.92 Aligned_cols=75 Identities=21% Similarity=0.305 Sum_probs=50.9
Q ss_pred cCCceEEEcCCc----------------chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862 8 YAGRSVLVTGGT----------------GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71 (152)
Q Consensus 8 ~~~~~ilItG~~----------------G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (152)
+++++++||||. |.+|.++++++..+|+ .|+++.+.....
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga---~V~~~~g~~~~~--------------------- 238 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA---DVTLITGPVSLL--------------------- 238 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC---EEEEeCCCCccC---------------------
Confidence 788999999993 4599999999999996 666666543210
Q ss_pred ccccCCcEEEEEcccCCCCCCCChhHH-H----HHhccccEEEeccccccc
Q psy11862 72 CPAQLSRLHIIEGDILQANLGIKDSDL-L----MLQEEVSVVFNGAASLKL 117 (152)
Q Consensus 72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~-~----~~~~~~d~vi~~a~~~~~ 117 (152)
.+..+ ...|+.+.+ ++ . ....+.|++|++||..++
T Consensus 239 ---~~~~~--~~~~v~~~~------~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 239 ---TPPGV--KSIKVSTAE------EMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred ---CCCCc--EEEEeccHH------HHHHHHHHhhcccCCEEEEccccccc
Confidence 01222 345666543 33 2 233468999999998764
No 318
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.82 E-value=0.00012 Score=50.24 Aligned_cols=79 Identities=20% Similarity=0.258 Sum_probs=46.1
Q ss_pred cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862 8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71 (152)
Q Consensus 8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (152)
++|++|+||+| +|-.|.++++++..+|+ .|.++.......
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga---~V~li~g~~~~~--------------------- 56 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA---EVTLIHGPSSLP--------------------- 56 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC---EEEEEecCcccc---------------------
Confidence 36788888876 57799999999999997 555555432100
Q ss_pred ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862 72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL 117 (152)
Q Consensus 72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~ 117 (152)
.+..+..+...-.++- .+.+...++..|++||+|+..++
T Consensus 57 ---~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 57 ---PPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp -----TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SE
T ss_pred ---ccccceEEEecchhhh----hhhhccccCcceeEEEecchhhe
Confidence 0246666665533321 22455556678999999999875
No 319
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.82 E-value=7.4e-05 Score=48.61 Aligned_cols=81 Identities=20% Similarity=0.165 Sum_probs=52.7
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
...+++++++|.|+ |+.|+.++..|...|. ..|+++.|+.. +.+.+... . ....+.++..
T Consensus 7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~~------ra~~l~~~---------~--~~~~~~~~~~ 66 (135)
T PF01488_consen 7 FGDLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTPE------RAEALAEE---------F--GGVNIEAIPL 66 (135)
T ss_dssp HSTGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSHH------HHHHHHHH---------H--TGCSEEEEEG
T ss_pred cCCcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCHH------HHHHHHHH---------c--CccccceeeH
Confidence 34578999999996 8899999999999865 67999998632 22222110 0 0133444433
Q ss_pred ccCCCCCCCChhHHHHHhccccEEEecccccc
Q psy11862 85 DILQANLGIKDSDLLMLQEEVSVVFNGAASLK 116 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~ 116 (152)
.+ +.......|+||++.+...
T Consensus 67 --~~---------~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 67 --ED---------LEEALQEADIVINATPSGM 87 (135)
T ss_dssp --GG---------HCHHHHTESEEEE-SSTTS
T ss_pred --HH---------HHHHHhhCCeEEEecCCCC
Confidence 22 4556678999999876543
No 320
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.80 E-value=0.0003 Score=52.05 Aligned_cols=110 Identities=15% Similarity=0.056 Sum_probs=67.3
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+|.|+|++|.+|..++..|+..|.. ..|++++|......+.....++ ............ ...+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~-~~v~lvd~~~~~~~l~~~~~dl---------~d~~~~~~~~~~---i~~~~-- 65 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVV-KEINLISRPKSLEKLKGLRLDI---------YDALAAAGIDAE---IKISS-- 65 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEECcccccccccccchh---------hhchhccCCCcE---EEECC--
Confidence 58999999999999999999998752 3688888843211111100000 000000000111 11111
Q ss_pred CCCChhHHHHHhccccEEEeccccccch-hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-AELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
+.. .+.++|++|-++|....+ .+..+.+..|+.....+.+...+.
T Consensus 66 ------d~~-~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~ 111 (309)
T cd05294 66 ------DLS-DVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF 111 (309)
T ss_pred ------CHH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 223 378999999999976543 355668888999999988887765
No 321
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.75 E-value=0.00046 Score=51.40 Aligned_cols=110 Identities=16% Similarity=0.051 Sum_probs=69.5
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
.+|.|+|++|.+|..++..|...+. +. .+++++..+....+.-...++ ..........+.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl---------~~~~~~~~~~~~----- 68 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGVAMEL---------EDCAFPLLAGVV----- 68 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchHHHHH---------hhccccccCCcE-----
Confidence 3799999999999999999988753 34 688888754211111111111 100000001111
Q ss_pred cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC
Q psy11862 86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK 143 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (152)
+.. +....++++|+||.+||.... .++..+.+..|+.-...+.....+..
T Consensus 69 i~~--------~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~ 119 (323)
T TIGR01759 69 ATT--------DPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA 119 (323)
T ss_pred Eec--------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 111 134556889999999997643 45677799999999999999888863
No 322
>KOG1494|consensus
Probab=97.75 E-value=0.00052 Score=49.62 Aligned_cols=108 Identities=18% Similarity=0.079 Sum_probs=72.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
..+.++.|.|+.|+||+.+..-|- ..+.+..+.+++-...+. .. .++. ..|-.
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~G-Va-----------------------aDlS--HI~T~ 78 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPG-VA-----------------------ADLS--HINTN 78 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCc-cc-----------------------cccc--ccCCC
Confidence 356799999999999999766554 557777776666433211 00 0111 11111
Q ss_pred CCCCCCC-hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
..-.+.. +++++..+++.|+|+--||.... ....++++++|..-...|..+..+.
T Consensus 79 s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~ 135 (345)
T KOG1494|consen 79 SSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC 135 (345)
T ss_pred CceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh
Confidence 1101111 34799999999999999997653 5667779999999999999888875
No 323
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.72 E-value=0.00034 Score=50.39 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=28.9
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR 48 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~ 48 (152)
|+|+|+||||. |+.+++.|.+.|+ .|+..+++..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~---~v~~s~~t~~ 34 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGI---EILVTVTTSE 34 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCC---eEEEEEccCC
Confidence 57999999999 9999999999986 6677777654
No 324
>KOG2733|consensus
Probab=97.72 E-value=8.9e-05 Score=55.10 Aligned_cols=85 Identities=19% Similarity=0.303 Sum_probs=60.6
Q ss_pred eEEEcCCcchhHHHHHHHHHh----hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLR----SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~----~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
-++|.||+||.|..+++++.+ .+. .+-+..|++. .+.+.+....++ .....+...++.+|..
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~---slavAGRn~~--KL~~vL~~~~~k---------~~~~ls~~~i~i~D~~ 72 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGL---SLAVAGRNEK--KLQEVLEKVGEK---------TGTDLSSSVILIADSA 72 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCc---eEEEecCCHH--HHHHHHHHHhhc---------cCCCcccceEEEecCC
Confidence 478999999999999999988 333 5566677644 445555544332 1111233338889998
Q ss_pred CCCCCCChhHHHHHhccccEEEecccccc
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLK 116 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~ 116 (152)
|+. ++.+..+.+.+|+||+|+..
T Consensus 73 n~~------Sl~emak~~~vivN~vGPyR 95 (423)
T KOG2733|consen 73 NEA------SLDEMAKQARVIVNCVGPYR 95 (423)
T ss_pred CHH------HHHHHHhhhEEEEeccccce
Confidence 865 79999999999999999765
No 325
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.69 E-value=0.00037 Score=54.00 Aligned_cols=77 Identities=22% Similarity=0.252 Sum_probs=51.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
+++++++|+|+++ +|.++++.|++.|+ .|.+.+++.. ....+.+.++.. .++.++.+|..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~---~V~~~d~~~~-~~~~~~~~~l~~---------------~~~~~~~~~~~ 62 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGA---KVILTDEKEE-DQLKEALEELGE---------------LGIELVLGEYP 62 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCC---EEEEEeCCch-HHHHHHHHHHHh---------------cCCEEEeCCcc
Confidence 5789999999887 99999999999997 5666666432 112222222211 23556666665
Q ss_pred CCCCCCChhHHHHHhccccEEEeccccc
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASL 115 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~ 115 (152)
+ ....++|+||+++|..
T Consensus 63 ~-----------~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 63 E-----------EFLEGVDLVVVSPGVP 79 (450)
T ss_pred h-----------hHhhcCCEEEECCCCC
Confidence 4 1235789999999864
No 326
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.66 E-value=0.00026 Score=45.14 Aligned_cols=35 Identities=31% Similarity=0.616 Sum_probs=29.8
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+|.|.|++|++|..+++.|.++ +.+..+.+++++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 5889999999999999999996 6776677777766
No 327
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.66 E-value=0.0021 Score=47.58 Aligned_cols=106 Identities=15% Similarity=0.023 Sum_probs=69.1
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
++|.|+|++|.+|..++..|+..+. +..+++++.. ...-...++... . ......... .+.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~-~a~g~alDL~~~------------~----~~~~i~~~~-~~~- 60 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIV-NTPGVAADLSHI------------N----TPAKVTGYL-GPE- 60 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecC-ccceeehHhHhC------------C----CcceEEEec-CCC-
Confidence 4789999999999999999987753 4578888875 211101111110 0 111111110 111
Q ss_pred CCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
++.+.++++|+||-+||... ..++..++++.|..-...+.+...+.
T Consensus 61 ------~~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 61 ------ELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred ------chHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 25566789999999999754 34567778999999999999888876
No 328
>PRK05442 malate dehydrogenase; Provisional
Probab=97.65 E-value=0.0012 Score=49.24 Aligned_cols=117 Identities=21% Similarity=0.105 Sum_probs=72.7
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCH---HHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTP---KARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
+.++|.|+|++|.+|..++..|+..+. +. .+++++..+....+ ..++..... +. ...+.
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~-----------~~-~~~~~ 69 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDDCAF-----------PL-LAGVV 69 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhhhhh-----------hh-cCCcE
Confidence 346899999999999999999887643 23 68888875431101 111111100 00 01111
Q ss_pred EEEcccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCC-CcceEec
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKK-LVVSLDI 151 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~ 151 (152)
++. +..+.++++|+||-+||.... .++..+.+..|+.-...+.+...+... -..++.+
T Consensus 70 -----i~~--------~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivv 129 (326)
T PRK05442 70 -----ITD--------DPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVV 129 (326)
T ss_pred -----Eec--------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 111 134556789999999997543 456777899999999999988888432 3345544
No 329
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.49 E-value=0.0004 Score=51.96 Aligned_cols=39 Identities=31% Similarity=0.457 Sum_probs=33.0
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR 48 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~ 48 (152)
+++|+|.||+|++|.++++.|.++++.+..+..+.+...
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 468999999999999999999998877777777876543
No 330
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.47 E-value=0.0013 Score=49.30 Aligned_cols=40 Identities=33% Similarity=0.433 Sum_probs=32.8
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++..+|+|.|+ |++|.+++..|...|. ..+.+++.+.
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D~ 58 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRDY 58 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCc
Confidence 34567789999995 8999999999999875 5888888754
No 331
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.43 E-value=0.003 Score=46.83 Aligned_cols=105 Identities=15% Similarity=0.022 Sum_probs=67.5
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL 91 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 91 (152)
+|.|+|++|.+|..++..|+..+. +..++++++.+.... ..++. .. .....+.... .+.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-~~elvL~Di~~a~g~-a~DL~------------~~----~~~~~i~~~~-~~~-- 59 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-VSELSLYDIAGAAGV-AADLS------------HI----PTAASVKGFS-GEE-- 59 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-CcEEEEecCCCCcEE-Echhh------------cC----CcCceEEEec-CCC--
Confidence 578999999999999999988753 357888887541110 00111 00 0111111100 011
Q ss_pred CCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 92 GIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 92 ~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
++...++++|+||-+||.... ..+..+.+..|+.-...+.+...+.
T Consensus 60 -----~~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 60 -----GLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred -----chHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 245677899999999997543 4566678899999988888888776
No 332
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.39 E-value=0.0038 Score=46.39 Aligned_cols=107 Identities=14% Similarity=0.143 Sum_probs=68.7
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
.+++|.|+|+ |.+|..++..|+..|. +..+++++++... +.....++ ....+. ..++..... +
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~--~~g~~~Dl---------~~~~~~-~~~~~i~~~---~ 67 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEK--AEGDAMDL---------SHAVPF-TSPTKIYAG---D 67 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCch--hHHHHHHH---------Hhhccc-cCCeEEEeC---C
Confidence 4579999997 9999999999988753 3478888885432 11111111 111110 012222211 1
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
.+ .++++|+||-+||.... ..+..+.+..|..-...+++...+.
T Consensus 68 ---------~~-~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 68 ---------YS-DCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred ---------HH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 35899999999997543 3566678899999999888888775
No 333
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.34 E-value=0.006 Score=45.13 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=69.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
++|.|.|+ |++|+.++..|+..|.. ..+++++++... .....++.... ........... .+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~-~ei~l~D~~~~~~~~~a~dL~~~~------------~~~~~~~~i~~---~~- 62 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIA-DELVLIDINEEKAEGEALDLEDAL------------AFLPSPVKIKA---GD- 62 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcchhhHhHhhHHHHh------------hccCCCeEEEc---CC-
Confidence 37889995 89999999999988642 278888886542 11111111110 00011222221 11
Q ss_pred CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
.. .+.++|+||.++|.... .++..+.+..|..-...+.+...+...-..++.+
T Consensus 63 --------~~-~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivv 116 (306)
T cd05291 63 --------YS-DCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVA 116 (306)
T ss_pred --------HH-HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 22 34789999999997543 3456678899999999998888876322344443
No 334
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.26 E-value=0.0012 Score=49.54 Aligned_cols=40 Identities=33% Similarity=0.419 Sum_probs=33.1
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++.++|+|.| .|++|.+++..|+..|. .++.+++++.
T Consensus 19 Q~~L~~~~VlIiG-~GglGs~va~~La~aGv--g~i~lvD~D~ 58 (338)
T PRK12475 19 QRKIREKHVLIVG-AGALGAANAEALVRAGI--GKLTIADRDY 58 (338)
T ss_pred HHhhcCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCc
Confidence 4567788999999 57799999999999975 5788888764
No 335
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.21 E-value=0.011 Score=44.00 Aligned_cols=109 Identities=16% Similarity=0.137 Sum_probs=66.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
.+.++|.|+|+ |.+|+.++..++..|. ..++++++++.... .+.++- ............+. + +
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~-g~~lDl----------~~~~~~~~~~~~i~-~--~ 65 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQ-GKALDL----------KHFSTLVGSNINIL-G--T 65 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccch-hHHHHH----------hhhccccCCCeEEE-e--C
Confidence 45679999996 9999999998888763 46888887654221 111111 00000001111111 1 1
Q ss_pred CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
. +++ .++++|+||.++|.... ..+..+.+..|..-...+.+...+.
T Consensus 66 ~--------d~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~ 112 (319)
T PTZ00117 66 N--------NYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY 112 (319)
T ss_pred C--------CHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 244 55899999999986543 3455667788887777777777765
No 336
>PRK08223 hypothetical protein; Validated
Probab=97.17 E-value=0.0045 Score=45.27 Aligned_cols=96 Identities=20% Similarity=0.141 Sum_probs=55.9
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQL 76 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 76 (152)
++.++..+|+|.| .|++|.+++..|+..|. .++.+++.+.... ++ .+.+...+.....+.++...+ .
T Consensus 22 Q~kL~~s~VlIvG-~GGLGs~va~~LA~aGV--G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP--~ 96 (287)
T PRK08223 22 QQRLRNSRVAIAG-LGGVGGIHLLTLARLGI--GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINP--E 96 (287)
T ss_pred HHHHhcCCEEEEC-CCHHHHHHHHHHHHhCC--CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCC--C
Confidence 4567788999998 67899999999999975 6888887654321 11 011100000011112221111 2
Q ss_pred CcEEEEEcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.++..+...++.. +...++++.|+|+.+.
T Consensus 97 v~V~~~~~~l~~~-------n~~~ll~~~DlVvD~~ 125 (287)
T PRK08223 97 LEIRAFPEGIGKE-------NADAFLDGVDVYVDGL 125 (287)
T ss_pred CEEEEEecccCcc-------CHHHHHhCCCEEEECC
Confidence 3455565556543 3677788999998654
No 337
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.14 E-value=0.016 Score=42.96 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=67.1
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC-CcEEEEEcccCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL-SRLHIIEGDILQAN 90 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~ 90 (152)
+|.|.|+ |.+|..++..|+..+ -+..+++++..+... .-...+ +........ ..+....+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~a--~g~a~D---------L~~~~~~~~~~~~~i~~~~----- 62 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVA--EGEALD---------FHHATALTYSTNTKIRAGD----- 62 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcchh--hHHHHH---------HHhhhccCCCCCEEEEECC-----
Confidence 4778897 999999999998875 345788888754311 111111 111111111 123333222
Q ss_pred CCCChhHHHHHhccccEEEeccccccch-hh--HHHHHHhhhHHHHHHHHHHHhcC
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-AE--LKENVAANTRGTQRLLDIALKMK 143 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~--~~~~~~~n~~~~~~l~~~~~~~~ 143 (152)
.+.++++|+||-+||....+ ++ ..+++..|..-...+.....+..
T Consensus 63 --------y~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~ 110 (307)
T cd05290 63 --------YDDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT 110 (307)
T ss_pred --------HHHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23457899999999976543 33 36688999999999999888763
No 338
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.12 E-value=0.0015 Score=45.45 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=33.4
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.+...+|+|.| .|++|.++++.|+..|. .++.+++.+.
T Consensus 16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d~ 55 (202)
T TIGR02356 16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDDH 55 (202)
T ss_pred HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCCE
Confidence 4567788999998 78899999999999875 6888888764
No 339
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.10 E-value=0.019 Score=42.52 Aligned_cols=106 Identities=17% Similarity=0.103 Sum_probs=67.0
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
++|.|+|+ |.+|+.++..|+.++.. ..+++++..+... -...++. .......... .+.+| .
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G~a~DL~------------~~~~~~~~~~-~i~~~-~-- 62 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEGVALDLS------------HAAAPLGSDV-KITGD-G-- 62 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccchhcchh------------hcchhccCce-EEecC-C--
Confidence 47899999 99999999999777542 2888888763211 0011111 1011011111 11111 1
Q ss_pred CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
+ .+.+++.|+|+-.||.... .++-.++++.|..-...+.+...+.
T Consensus 63 -------~-y~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~ 108 (313)
T COG0039 63 -------D-YEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY 108 (313)
T ss_pred -------C-hhhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 1 2345789999999997764 3477779999999999998888876
No 340
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.09 E-value=0.0014 Score=49.10 Aligned_cols=36 Identities=28% Similarity=0.431 Sum_probs=30.3
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.|.||+|++|.++++.|.++++.+..+..+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence 478999999999999999999878777777776654
No 341
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.09 E-value=0.0016 Score=45.20 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=32.9
Q ss_pred cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
.++.+..++++|.|+ |++|..++..|++.|. ..+.+.+.+
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D 54 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFD 54 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 345677889999995 7899999999999875 578888876
No 342
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.05 E-value=0.017 Score=42.60 Aligned_cols=107 Identities=15% Similarity=0.133 Sum_probs=62.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++|.|.|+ |.+|..++..++..|.. .|+++++++.. +.....++.. ......... .+...
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~--~~~~~~dl~~---------~~~~~~~~~-----~i~~~ 62 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGV--PQGKALDIAE---------AAPVEGFDT-----KITGT 62 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCch--hHHHHHHHHh---------hhhhcCCCc-----EEEeC
Confidence 479999998 99999999999887642 78888875431 1111111100 000000111 11110
Q ss_pred CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
. ++ +.++++|+||.+++.... ..+..+.+..|+.....+++...+.
T Consensus 63 ~------d~-~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 63 N------DY-EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred C------CH-HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 23 245799999999886542 2334456677777777777777665
No 343
>KOG1202|consensus
Probab=97.05 E-value=0.00095 Score=56.81 Aligned_cols=123 Identities=20% Similarity=0.219 Sum_probs=82.1
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEGDIL 87 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 87 (152)
..+.++|+||-|+-|.+++.+|..+|. +++++.+|+....--...+ ..+... +..+.+-..|++
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vrrWr~~-------------GVqV~vsT~nit 1831 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVRRWRRR-------------GVQVQVSTSNIT 1831 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHHHHHhc-------------CeEEEEecccch
Confidence 468999999999999999999999986 6888888876432222222 222211 234444455666
Q ss_pred CCCCCCChhHHHHHh------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862 88 QANLGIKDSDLLMLQ------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG 152 (152)
Q Consensus 88 ~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S 152 (152)
..+ .-..++ ..+-.|||+|+... .++++++.-+..+.++.+|-+..++. +.++.||..|
T Consensus 1832 t~~------ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FS 1904 (2376)
T KOG1202|consen 1832 TAE------GARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFS 1904 (2376)
T ss_pred hhh------hHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEE
Confidence 543 223333 35678999987643 36777888888899999998888774 3456665443
No 344
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.04 E-value=0.017 Score=42.99 Aligned_cols=105 Identities=14% Similarity=0.055 Sum_probs=66.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
++|.|+|+ |.+|..++..|+..+ -+..+++++...... -...++... .+.. ....+... .+
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~g~a~Dl~~~------------~~~~-~~~~v~~~--~d- 65 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGEAMDLQHG------------SAFL-KNPKIEAD--KD- 65 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHHHHHHHHh------------hccC-CCCEEEEC--CC-
Confidence 48999995 999999999998875 345788888754311 111111111 1100 11111110 11
Q ss_pred CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
++ .++++|+||-+||.... .++..+.+..|..-...+.+...+.
T Consensus 66 --------y~-~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 66 --------YS-VTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred --------HH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 35889999999997553 3456678899999998888888876
No 345
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.03 E-value=0.0023 Score=44.84 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=33.0
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++..+|+|.| .|++|.+++..|+..|. .++.+++.+.
T Consensus 23 q~~L~~~~V~ViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~ 62 (212)
T PRK08644 23 LEKLKKAKVGIAG-AGGLGSNIAVALARSGV--GNLKLVDFDV 62 (212)
T ss_pred HHHHhCCCEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence 4567788999999 68999999999999875 5788888763
No 346
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.02 E-value=0.0047 Score=44.30 Aligned_cols=40 Identities=20% Similarity=0.148 Sum_probs=33.0
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++..+|+|.|+ |++|.++++.|+..|. .++.+++.+.
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gv--g~i~lvD~D~ 66 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGV--GTLTLVDFDT 66 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCE
Confidence 35667889999996 9999999999999875 6888887654
No 347
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.01 E-value=0.019 Score=44.60 Aligned_cols=117 Identities=17% Similarity=0.069 Sum_probs=71.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhh-------CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRS-------CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE 83 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~-------g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
-+|.|+|++|.+|.+++..|+.. +. +..++.+++..... .-..-++ .........++.+..
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i-~~eLvliD~~~~~a--~G~amDL---------~daa~~~~~~v~i~~ 168 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPI-ALKLLGSERSKQAL--EGVAMEL---------EDSLYPLLREVSIGI 168 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCc-ccEEEEEcCCcchh--HHHHHHH---------HHhhhhhcCceEEec
Confidence 48999999999999999999876 32 23677777654421 1111111 111100011221111
Q ss_pred cccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHh-cCCCcceEecC
Q psy11862 84 GDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALK-MKKLVVSLDIG 152 (152)
Q Consensus 84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~S 152 (152)
+ -...++++|+||-.||.... .++..++++.|+.-...+.+...+ ...-..++.+|
T Consensus 169 ----~---------~ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 169 ----D---------PYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred ----C---------CHHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 1 13455789999999997543 456777899999999999999888 43223455443
No 348
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.93 E-value=0.031 Score=40.44 Aligned_cols=106 Identities=15% Similarity=0.066 Sum_probs=64.6
Q ss_pred EEEcCCcchhHHHHHHHHHhhCC-CCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCP-DIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~-~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
+.|+|++|.+|..++..|+..|. .+..++++++++... ....+++.... .. ....+. .++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~------------~~-~~~~i~---~~~-- 62 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVE------------PL-ADIKVS---ITD-- 62 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhh------------hc-cCcEEE---ECC--
Confidence 46889989999999999988751 234788888765321 11111211110 00 011111 122
Q ss_pred CCCChhHHHHHhccccEEEeccccccch-hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-AELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
++...++++|+||..++....+ ....+....|+.....+.+...+.
T Consensus 63 ------d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 63 ------DPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred ------chHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2556678999999999875432 334446677888888888877765
No 349
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.93 E-value=0.0046 Score=43.79 Aligned_cols=40 Identities=25% Similarity=0.238 Sum_probs=32.5
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.+...+|+|.| .|++|.++++.|+..|. .++.+++.+.
T Consensus 16 q~~L~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~D~ 55 (228)
T cd00757 16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDDDV 55 (228)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCE
Confidence 4567788999998 78899999999999875 6787776543
No 350
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.91 E-value=0.011 Score=46.03 Aligned_cols=111 Identities=13% Similarity=0.006 Sum_probs=67.4
Q ss_pred ceEEEcCCcchhHHHHHHHHHhh---CCCC-cEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRS---CPDI-GKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~---g~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
-+|+||||+|.||++++..+++- |++- ..+++++..+....+.-..-++. ....-....+.+. .
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~---------D~a~pll~~v~i~-~-- 191 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVE---------DLAFPLLRGISVT-T-- 191 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHH---------HhHHhhcCCcEEE-E--
Confidence 36999999999999999999883 5432 23455555322211111111111 1000001122222 1
Q ss_pred CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC
Q psy11862 87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK 143 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (152)
+ ....++++|+||-.+|.... .++..+.++.|..-.....+...+..
T Consensus 192 -~---------~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a 239 (452)
T cd05295 192 -D---------LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA 239 (452)
T ss_pred -C---------CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 24566899999999997543 45677789999999999988888763
No 351
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.89 E-value=0.003 Score=49.34 Aligned_cols=78 Identities=15% Similarity=0.170 Sum_probs=49.0
Q ss_pred cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862 8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71 (152)
Q Consensus 8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (152)
++|++++||+| +|-.|.+|++++..+|.+| .++.-.....
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~V---tlI~Gp~~~~--------------------- 309 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEV---TLISGPVDLA--------------------- 309 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcE---EEEeCCcCCC---------------------
Confidence 78999999987 4669999999999999754 4443211100
Q ss_pred ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862 72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL 117 (152)
Q Consensus 72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~ 117 (152)
.+..+.++..+-.++- .+.+.+.+ ..|++|++|+..++
T Consensus 310 ---~p~~v~~i~V~ta~eM----~~av~~~~-~~Di~I~aAAVaDy 347 (475)
T PRK13982 310 ---DPQGVKVIHVESARQM----LAAVEAAL-PADIAIFAAAVADW 347 (475)
T ss_pred ---CCCCceEEEecCHHHH----HHHHHhhC-CCCEEEEeccccce
Confidence 1244555555432211 11233333 37999999998775
No 352
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.85 E-value=0.0091 Score=42.68 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=33.4
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR 48 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~ 48 (152)
++.++..+|+|.| .|++|.+++..|+..|. .++.+++.+..
T Consensus 19 q~~L~~~~VlvvG-~GglGs~va~~La~~Gv--g~i~lvD~D~v 59 (240)
T TIGR02355 19 QEALKASRVLIVG-LGGLGCAASQYLAAAGV--GNLTLLDFDTV 59 (240)
T ss_pred HHHHhCCcEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCcc
Confidence 4557778999998 77899999999999865 68888887643
No 353
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.83 E-value=0.0054 Score=46.13 Aligned_cols=38 Identities=29% Similarity=0.339 Sum_probs=31.0
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+..++.|.|++|++|.++++.|.++++.+..+..+...
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 45789999999999999999999877766677666543
No 354
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.82 E-value=0.016 Score=49.49 Aligned_cols=79 Identities=19% Similarity=0.202 Sum_probs=52.4
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCc------------EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIG------------KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL 76 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~------------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (152)
.+++|+|.|+ |++|+.+++.|.+. .++. .|.+.+++. ++.+.+... .
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~la~~-------------~ 626 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYL------KDAKETVEG-------------I 626 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCH------HHHHHHHHh-------------c
Confidence 4679999995 99999999999876 2322 244444431 222222110 1
Q ss_pred CcEEEEEcccCCCCCCCChhHHHHHhccccEEEecccc
Q psy11862 77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAAS 114 (152)
Q Consensus 77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 114 (152)
+++..+..|++|.+ ++.++++++|+||++...
T Consensus 627 ~~~~~v~lDv~D~e------~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 627 ENAEAVQLDVSDSE------SLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred CCCceEEeecCCHH------HHHHhhcCCCEEEECCCc
Confidence 35667888988744 688887889999998754
No 355
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.77 E-value=0.0035 Score=47.77 Aligned_cols=37 Identities=19% Similarity=0.452 Sum_probs=29.5
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
..++|.|.||||++|.++++.|.++ +. ..+..+.++.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~~ 73 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTADR 73 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEEChh
Confidence 4568999999999999999999888 33 3677776643
No 356
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.77 E-value=0.0076 Score=39.03 Aligned_cols=92 Identities=18% Similarity=0.219 Sum_probs=52.4
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQLSRLHI 81 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
.++++|.| .|++|.++++.|+..|. .++.+++.+.-.. ++ .+.+...+...+-..+.... ...++..
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n--p~~~v~~ 76 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN--PDVEVEA 76 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS--TTSEEEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc--Cceeeee
Confidence 46888988 78899999999999976 6888887653211 00 00000000000001111111 1345667
Q ss_pred EEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862 82 IEGDILQANLGIKDSDLLMLQEEVSVVFNGAA 113 (152)
Q Consensus 82 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~ 113 (152)
+..++.+ +....++++.|+||.+..
T Consensus 77 ~~~~~~~-------~~~~~~~~~~d~vi~~~d 101 (135)
T PF00899_consen 77 IPEKIDE-------ENIEELLKDYDIVIDCVD 101 (135)
T ss_dssp EESHCSH-------HHHHHHHHTSSEEEEESS
T ss_pred eeccccc-------ccccccccCCCEEEEecC
Confidence 7677632 357777889999998753
No 357
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.74 E-value=0.005 Score=46.88 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=31.7
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+.++.++|+|.| .|++|.+++..|+..|. .++.+++++
T Consensus 131 ~~l~~~~VlvvG-~GG~Gs~ia~~La~~Gv--g~i~lvD~d 168 (376)
T PRK08762 131 RRLLEARVLLIG-AGGLGSPAALYLAAAGV--GTLGIVDHD 168 (376)
T ss_pred HHHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 456778899997 58899999999999875 688888876
No 358
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.72 E-value=0.044 Score=40.91 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=68.5
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
+.++|.|.| .|.+|..++..++..|. ..+++++.++... ..+.++.... .........+... .
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~-~~~~ld~~~~----------~~~~~~~~~I~~~--~- 67 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIP-QGKALDISHS----------NVIAGSNSKVIGT--N- 67 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchh-hHHHHHHHhh----------hhccCCCeEEEEC--C-
Confidence 457999999 68999999999888765 3588888765432 1112211100 0000111222210 1
Q ss_pred CCCCCChhHHHHHhccccEEEeccccccch-h-----hHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE-A-----ELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
+++ .++++|+||.++|....+ . +..+.+..|+.-...+.+...+......++.+
T Consensus 68 --------d~~-~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~ 127 (321)
T PTZ00082 68 --------NYE-DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVI 127 (321)
T ss_pred --------CHH-HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 132 458999999999875422 2 45557777888777777777765222244443
No 359
>PLN02602 lactate dehydrogenase
Probab=96.71 E-value=0.054 Score=40.95 Aligned_cols=105 Identities=13% Similarity=0.106 Sum_probs=66.4
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
++|.|+|+ |.+|..++..|+..+. +..+++++..+... -...++... .+. .....+ .+. .+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~LiDi~~~~~~g~a~DL~~~------------~~~-~~~~~i-~~~-~d- 99 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDL-ADELALVDVNPDKLRGEMLDLQHA------------AAF-LPRTKI-LAS-TD- 99 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCCchhhHHHHHHHhh------------hhc-CCCCEE-EeC-CC-
Confidence 69999995 9999999999988753 35788888754311 111111111 110 111111 111 11
Q ss_pred CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
.. .++++|+||-+||.... .++..+.+..|+.-...+.+...+.
T Consensus 100 --------y~-~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 100 --------YA-VTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred --------HH-HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 35789999999997543 3456678888999888888888776
No 360
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.70 E-value=0.011 Score=44.68 Aligned_cols=40 Identities=23% Similarity=0.211 Sum_probs=32.9
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.+++.+|+|.| .|++|.+++..|+..|. .++.+++.+.
T Consensus 23 q~~L~~~~VlivG-~GGlGs~~a~~La~~Gv--g~i~lvD~D~ 62 (355)
T PRK05597 23 QQSLFDAKVAVIG-AGGLGSPALLYLAGAGV--GHITIIDDDT 62 (355)
T ss_pred HHHHhCCeEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence 3457788999998 58899999999999865 6888888764
No 361
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.69 E-value=0.031 Score=38.00 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=52.7
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHh--cChhhhhhhhhccccCCcEEEEEc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS--KLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
.+.++++.|.| .|.||+++++.+...|. +|+.++|+..... ...... ...+. ++- ...++.++.+
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~~~~~~---~~~~~~~~~~~l~-ell-----~~aDiv~~~~ 99 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAFGM---RVIGYDRSPKPEE---GADEFGVEYVSLD-ELL-----AQADIVSLHL 99 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHHHH---HHHHTTEEESSHH-HHH-----HH-SEEEE-S
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecCCc---eeEEecccCChhh---hcccccceeeehh-hhc-----chhhhhhhhh
Confidence 46789999998 79999999999998884 8889988654211 011110 00100 000 0156667777
Q ss_pred ccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 85 DILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.+++...++-.++..+.+++--++||.+
T Consensus 100 plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred ccccccceeeeeeeeeccccceEEEecc
Confidence 7666554444344445455444666654
No 362
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.68 E-value=0.028 Score=43.11 Aligned_cols=39 Identities=26% Similarity=0.226 Sum_probs=31.7
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
..++..+|+|.| .|++|.+++..|+..|. .++.+++.+.
T Consensus 38 ~~L~~~~VlviG-~GGlGs~va~~La~~Gv--g~i~lvD~D~ 76 (392)
T PRK07878 38 KRLKNARVLVIG-AGGLGSPTLLYLAAAGV--GTLGIVEFDV 76 (392)
T ss_pred HHHhcCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCCE
Confidence 456778999998 77899999999999875 6788877653
No 363
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.67 E-value=0.012 Score=45.59 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=47.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++|+|+ |.+|.++++.|.+.|+ .++++++++. .+..+.. ..++.++.+|.+++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~---~v~vid~~~~------~~~~~~~--------------~~~~~~~~gd~~~~~ 56 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN---DVTVIDTDEE------RLRRLQD--------------RLDVRTVVGNGSSPD 56 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---cEEEEECCHH------HHHHHHh--------------hcCEEEEEeCCCCHH
Confidence 47889986 9999999999999886 5567776432 2222211 134677788877643
Q ss_pred CCCChhHHHHH-hccccEEEecc
Q psy11862 91 LGIKDSDLLML-QEEVSVVFNGA 112 (152)
Q Consensus 91 ~~~~~~~~~~~-~~~~d~vi~~a 112 (152)
.+.++ ++++|.++-+.
T Consensus 57 ------~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 57 ------VLREAGAEDADLLIAVT 73 (453)
T ss_pred ------HHHHcCCCcCCEEEEec
Confidence 45555 56778777654
No 364
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.62 E-value=0.083 Score=40.45 Aligned_cols=117 Identities=17% Similarity=0.089 Sum_probs=68.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEe--ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYIL--CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE 83 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
-+|.|+|++|.+|.+++..|+..+. +. .++++ ++... .+.-..-++ ..........+.+..
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~--~a~g~a~DL---------~d~a~~~~~~v~i~~ 112 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKE--ALEGVAMEL---------EDSLYPLLREVSIGI 112 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccch--hhhHHHHHH---------HHhhhhhcCceEEec
Confidence 4899999999999999999988753 22 23333 43322 111111111 111100011221111
Q ss_pred cccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCC-cceEecC
Q psy11862 84 GDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKL-VVSLDIG 152 (152)
Q Consensus 84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~S 152 (152)
. -...++++|+||-+||.... .++..+++..|+.-...+.....+..+. .+++.+|
T Consensus 113 ~-------------~y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 113 D-------------PYEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred C-------------CHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 1 13455789999999997653 3567778999999999999988884323 3445443
No 365
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.60 E-value=0.0048 Score=46.25 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=30.7
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+++|.|+||||++|.++++.|.++++.+..+..+...
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~ 40 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS 40 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc
Confidence 3689999999999999999999876777777666543
No 366
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.55 E-value=0.027 Score=43.69 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=29.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.+++++|||+++ +|.++++.|.+.|+ .|++.++..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~---~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA---NVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCC---EEEEEcCCC
Confidence 4678999999887 99999999999986 567766543
No 367
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.52 E-value=0.022 Score=42.57 Aligned_cols=87 Identities=17% Similarity=0.175 Sum_probs=58.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-------CHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-------TPKARLAEFSKLPVFERLRKECPAQLSRLH 80 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
+.++++-|.| .|.||+.+++.+...|. +|+..++..... ...+.++++.+. .++.
T Consensus 140 l~gkTvGIiG-~G~IG~~va~~l~afgm---~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~--------------sDiv 201 (324)
T COG0111 140 LAGKTVGIIG-LGRIGRAVAKRLKAFGM---KVIGYDPYSPRERAGVDGVVGVDSLDELLAE--------------ADIL 201 (324)
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHHhCCC---eEEEECCCCchhhhccccceecccHHHHHhh--------------CCEE
Confidence 5689999999 89999999999999885 788888732221 001234444332 6788
Q ss_pred EEEcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 81 IIEGDILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 81 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.+...++++..++--.+..+.++.--++||++
T Consensus 202 ~lh~PlT~eT~g~i~~~~~a~MK~gailIN~a 233 (324)
T COG0111 202 TLHLPLTPETRGLINAEELAKMKPGAILINAA 233 (324)
T ss_pred EEcCCCCcchhcccCHHHHhhCCCCeEEEECC
Confidence 88888888765555344444444334888887
No 368
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.51 E-value=0.011 Score=39.00 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=29.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.++++++|+|+ |.+|..+++.|.+.|. ..|.+.+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~--~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGA--AKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence 45789999997 8999999999998852 4677777753
No 369
>PRK08328 hypothetical protein; Provisional
Probab=96.49 E-value=0.022 Score=40.43 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=32.5
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.+++.+|+|.| .|++|.+++..|+..|. .++.+++.+.
T Consensus 22 q~~L~~~~VlIiG-~GGlGs~ia~~La~~Gv--g~i~lvD~D~ 61 (231)
T PRK08328 22 QEKLKKAKVAVVG-VGGLGSPVAYYLAAAGV--GRILLIDEQT 61 (231)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCc
Confidence 3456778999998 77899999999999875 6888887654
No 370
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.49 E-value=0.017 Score=43.91 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=32.7
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++..+|+|.| .|++|.+++..|+..|. .++.+++.+.
T Consensus 36 q~~l~~~~VliiG-~GglG~~v~~~La~~Gv--g~i~ivD~D~ 75 (370)
T PRK05600 36 QERLHNARVLVIG-AGGLGCPAMQSLASAGV--GTITLIDDDT 75 (370)
T ss_pred HHHhcCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEeCCE
Confidence 3456778999998 67899999999999865 6888888763
No 371
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.46 E-value=0.027 Score=39.07 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=31.8
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++..+|+|.|+ |++|.++++.|+..|. .++.+++.+.
T Consensus 16 Q~~L~~s~VlIiG~-gglG~evak~La~~GV--g~i~lvD~d~ 55 (197)
T cd01492 16 QKRLRSARILLIGL-KGLGAEIAKNLVLSGI--GSLTILDDRT 55 (197)
T ss_pred HHHHHhCcEEEEcC-CHHHHHHHHHHHHcCC--CEEEEEECCc
Confidence 34567789999985 5599999999999875 6888887653
No 372
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=96.41 E-value=0.09 Score=38.98 Aligned_cols=115 Identities=11% Similarity=0.104 Sum_probs=66.3
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
+++.|.|+ |.+|..++..++..|.. .|++++..+.... .+.+ ++... ...... ...+.-..
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~~-g~a~-d~~~~---------~~~~~~-----~~~i~~t~ 62 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIPQ-GKAL-DMYEA---------SPVGGF-----DTKVTGTN 62 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChhH-HHHH-hhhhh---------hhccCC-----CcEEEecC
Confidence 47888895 99999999999998752 5788887433111 1111 11100 000000 01111000
Q ss_pred CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
++.. ++++|+||-++|.... .++..+.+..|+.....+++...+...-..++.+
T Consensus 63 ------d~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~ 117 (305)
T TIGR01763 63 ------NYAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVV 117 (305)
T ss_pred ------CHHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 2333 5789999999996543 3345567888999988888887765322334443
No 373
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.37 E-value=0.037 Score=41.13 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=53.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH---HHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP---KARLAEFSKLPVFERLRKECPAQLSRLHIIE 83 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
-+.++++.|.| .|.||+.+++.+...|- +|++.+|....... ...+.++.+ ..++..+.
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm---~V~~~d~~~~~~~~~~~~~~l~ell~--------------~sDvv~lh 203 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGA---KVVYYSTSGKNKNEEYERVSLEELLK--------------TSDIISIH 203 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhcCC---EEEEECCCccccccCceeecHHHHhh--------------cCCEEEEe
Confidence 37899999999 89999999999987763 78888875321100 012222222 15677777
Q ss_pred cccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 84 GDILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
+.+++...++-.++..+.+++--++||.+
T Consensus 204 ~Plt~~T~~li~~~~~~~Mk~~a~lIN~a 232 (311)
T PRK08410 204 APLNEKTKNLIAYKELKLLKDGAILINVG 232 (311)
T ss_pred CCCCchhhcccCHHHHHhCCCCeEEEECC
Confidence 77766543333334444445444555544
No 374
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.36 E-value=0.052 Score=35.39 Aligned_cols=33 Identities=30% Similarity=0.362 Sum_probs=26.9
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+++|.|. |++|.++++.|...|. .++.+++.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCC
Confidence 4788884 8999999999999876 5788887653
No 375
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.34 E-value=0.021 Score=43.02 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=26.6
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
++++.|.|++|++|+++++.|.+. +.+ ++..+.+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEC
Confidence 478999999999999999999876 344 5545444
No 376
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.32 E-value=0.03 Score=41.15 Aligned_cols=38 Identities=11% Similarity=0.168 Sum_probs=30.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR 48 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~ 48 (152)
.++++++|.|+ |+.+++++..|...|. .+|+++.|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~--~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCcc
Confidence 46789999996 5559999999988765 68999999743
No 377
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.30 E-value=0.0042 Score=46.08 Aligned_cols=77 Identities=18% Similarity=0.283 Sum_probs=51.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
..++|-||+||.|..++++|.++|. +..+..|+. .++..+.. ..+..+..+++..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~---~~aLAgRs~------~kl~~l~~------------~LG~~~~~~p~~~---- 61 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGL---TAALAGRSS------AKLDALRA------------SLGPEAAVFPLGV---- 61 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCC---chhhccCCH------HHHHHHHH------------hcCccccccCCCC----
Confidence 4689999999999999999999975 335556653 23332221 1123333333332
Q ss_pred CCCChhHHHHHhccccEEEecccccc
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLK 116 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~ 116 (152)
+..+.+...+.++|+||+|...
T Consensus 62 ----p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 62 ----PAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ----HHHHHHHHhcceEEEecccccc
Confidence 2357888889999999999764
No 378
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.29 E-value=0.025 Score=38.43 Aligned_cols=89 Identities=19% Similarity=0.201 Sum_probs=49.6
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHH---HHHh---cChhhhhhhhhccccCCcEEEEEc
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARL---AEFS---KLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+++|.| .|++|.+++..|+..|. .++.+.+.+... .++...+ ..+. .....+.+++..+ ..++..+..
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp--~v~i~~~~~ 75 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV--GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP--FVKIEAINI 75 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC--CCEEEEEEe
Confidence 477888 68999999999999875 578888876421 1211100 0110 0011111111111 234545554
Q ss_pred ccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 85 DILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.+.. +.+.+.+++.|+||.+.
T Consensus 76 ~~~~-------~~~~~~l~~~DlVi~~~ 96 (174)
T cd01487 76 KIDE-------NNLEGLFGDCDIVVEAF 96 (174)
T ss_pred ecCh-------hhHHHHhcCCCEEEECC
Confidence 4433 24677788999999874
No 379
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.26 E-value=0.032 Score=40.31 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=26.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+++.|+|++|.+|+.+++.+.+. .++..+.+++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~ 36 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRP 36 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 58999999999999999888765 344444445554
No 380
>PRK07411 hypothetical protein; Validated
Probab=96.23 E-value=0.028 Score=43.10 Aligned_cols=97 Identities=20% Similarity=0.204 Sum_probs=55.4
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQL 76 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 76 (152)
++.++..+|+|.| .|++|.+++..|+..|. .++.+++.+.... ++ .+.+...+.....+.++...+ .
T Consensus 33 q~~L~~~~VlivG-~GGlG~~va~~La~~Gv--g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np--~ 107 (390)
T PRK07411 33 QKRLKAASVLCIG-TGGLGSPLLLYLAAAGI--GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINP--Y 107 (390)
T ss_pred HHHHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCC--C
Confidence 3456778999998 67899999999999865 6888887654221 11 011110000011112221111 2
Q ss_pred CcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862 77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA 113 (152)
Q Consensus 77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~ 113 (152)
.++..+...++.. .....+.+.|+||.+..
T Consensus 108 v~v~~~~~~~~~~-------~~~~~~~~~D~Vvd~~d 137 (390)
T PRK07411 108 CQVDLYETRLSSE-------NALDILAPYDVVVDGTD 137 (390)
T ss_pred CeEEEEecccCHH-------hHHHHHhCCCEEEECCC
Confidence 3455555555442 35667788999988753
No 381
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.22 E-value=0.018 Score=43.20 Aligned_cols=38 Identities=32% Similarity=0.538 Sum_probs=31.0
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+..++.|.||||++|.++++.|.++.+.+.++..+..+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 45789999999999999999999865566777766654
No 382
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.21 E-value=0.024 Score=42.70 Aligned_cols=33 Identities=27% Similarity=0.617 Sum_probs=25.5
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEE-Eeec
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVY-ILCR 45 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~-~~~r 45 (152)
++|.|.|+||++|..+++.|.++ +.+ .+. ++++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~-el~~l~~s 34 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEV-EITYLVSS 34 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEecc
Confidence 47899999999999999999876 444 455 4343
No 383
>PRK14851 hypothetical protein; Provisional
Probab=96.19 E-value=0.028 Score=46.05 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=57.2
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHH----HHHHHhcC---hhhhhhhhhccccC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKA----RLAEFSKL---PVFERLRKECPAQL 76 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~----~~~~~~~~---~~~~~~~~~~~~~~ 76 (152)
++.+++.+|+|.| .|++|.+++..|+..|. .++.+++.+.... ++.- ....+... .+-+.+....+ .
T Consensus 38 Q~kL~~~~VlIvG-~GGlGs~va~~Lar~GV--G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP--~ 112 (679)
T PRK14851 38 QERLAEAKVAIPG-MGGVGGVHLITMVRTGI--GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP--F 112 (679)
T ss_pred HHHHhcCeEEEEC-cCHHHHHHHHHHHHhCC--CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC--C
Confidence 4567888999999 78999999999999976 5788777543221 1110 00111000 01111111111 2
Q ss_pred CcEEEEEcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.+++.+...++. +++..+++++|+||.+.
T Consensus 113 ~~I~~~~~~i~~-------~n~~~~l~~~DvVid~~ 141 (679)
T PRK14851 113 LEITPFPAGINA-------DNMDAFLDGVDVVLDGL 141 (679)
T ss_pred CeEEEEecCCCh-------HHHHHHHhCCCEEEECC
Confidence 456666666643 35778889999999765
No 384
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.18 E-value=0.019 Score=42.90 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=28.4
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
++++.|.|++|+.|.+|++.|..+ +.+. +.+.+.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss~ 36 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PDVE-LILISSR 36 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeech
Confidence 578999999999999999999998 5665 5555443
No 385
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.17 E-value=0.031 Score=37.74 Aligned_cols=37 Identities=30% Similarity=0.379 Sum_probs=31.2
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
.+.+++++|.|+++.+|..+++.|.+.|. +|+++.|+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~---~V~v~~r~ 77 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA---TVTVCHSK 77 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC---EEEEEECC
Confidence 47899999999977889999999999874 57777775
No 386
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.12 E-value=0.18 Score=37.36 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=64.4
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|++.|.|+ |.+|..++..|+..|. +..+++++++... +.....++... ... .........
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~--~~g~a~dl~~~---------~~~-~~~~~i~~~------ 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAK--AEGEAMDLAHG---------TPF-VKPVRIYAG------ 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchh--hhhHHHHHHcc---------ccc-cCCeEEeeC------
Confidence 46889997 8999999999999873 3478888886431 11111111110 000 011111111
Q ss_pred CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
+. ..++++|++|-+++.... ..+..+....|+.-...+.+...+.
T Consensus 61 ------d~-~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 61 ------DY-ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred ------CH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 236899999999986542 3456667788888888887777665
No 387
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.05 E-value=0.045 Score=37.97 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=31.9
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++..+|+|.|.+| +|.++++.|+..|. .++.+++.+.
T Consensus 14 q~~L~~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d~ 53 (198)
T cd01485 14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHRL 53 (198)
T ss_pred HHHHhhCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECCc
Confidence 3456778999998655 99999999999865 6888887654
No 388
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.05 E-value=0.035 Score=42.87 Aligned_cols=39 Identities=21% Similarity=0.426 Sum_probs=32.3
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
..+.+++++|.|+ |+.|..++..|...|. ..+++..|+.
T Consensus 177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~ 215 (414)
T PRK13940 177 DNISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI 215 (414)
T ss_pred cCccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 3467899999995 8999999999998865 5788888863
No 389
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=95.98 E-value=0.22 Score=36.85 Aligned_cols=111 Identities=14% Similarity=0.055 Sum_probs=66.2
Q ss_pred EcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCCC
Q psy11862 15 VTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIK 94 (152)
Q Consensus 15 ItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 94 (152)
|.| .|.+|..++..|+..+. +..++++++.... +.-...++ ..........+.+. . .+
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l-~~el~L~Di~~~~--~~g~a~Dl---------~~~~~~~~~~~~i~-~--~~------ 58 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGI-ADEIVLIDINKDK--AEGEAMDL---------QHAASFLPTPKKIR-S--GD------ 58 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCC-CCEEEEEeCCCCh--hhHHHHHH---------HHhhcccCCCeEEe-c--CC------
Confidence 345 59999999999988753 4578888875431 11111111 11111011222222 1 11
Q ss_pred hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862 95 DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151 (152)
Q Consensus 95 ~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 151 (152)
.+.++++|+||-+||.... ..+..+.+..|+.-...+.+...+...-..++.+
T Consensus 59 ----~~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivv 112 (299)
T TIGR01771 59 ----YSDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVA 112 (299)
T ss_pred ----HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 2356789999999997543 3456678899999999998888876322344443
No 390
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.94 E-value=0.032 Score=35.64 Aligned_cols=36 Identities=31% Similarity=0.434 Sum_probs=27.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++|.|.|.+|..|+.+++.+.+. .+..-+-.++|++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999995 3434455566654
No 391
>KOG1198|consensus
Probab=95.91 E-value=0.045 Score=41.29 Aligned_cols=29 Identities=31% Similarity=0.493 Sum_probs=23.3
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSC 34 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g 34 (152)
..-+++.+||.||+|++|++.++-....+
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~ 182 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG 182 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHHhcC
Confidence 34577899999999999999776666654
No 392
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.89 E-value=0.041 Score=40.37 Aligned_cols=35 Identities=29% Similarity=0.429 Sum_probs=29.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
+++++++|.|++|.+|++++..|.+.|. .|.++.|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga---tVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA---TVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC---EEEEEeC
Confidence 6889999999999999999999998874 5666555
No 393
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.88 E-value=0.067 Score=40.16 Aligned_cols=36 Identities=14% Similarity=0.303 Sum_probs=30.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.++++.|.| .|.||+.+++.|...|. +|+..+|+.
T Consensus 148 L~gktvgIiG-~G~IG~~vA~~l~~~G~---~V~~~d~~~ 183 (333)
T PRK13243 148 VYGKTIGIIG-FGRIGQAVARRAKGFGM---RILYYSRTR 183 (333)
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 6889999999 69999999999998875 677788754
No 394
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=95.88 E-value=0.095 Score=39.00 Aligned_cols=90 Identities=21% Similarity=0.254 Sum_probs=50.1
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQLSRLHIIE 83 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
+|+|.| .|++|.++++.|+..|. ..+.+++.+.... ++ .+.+...+.....+.+++..+ ..++..+.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gv--g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp--~v~V~~~~ 75 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGF--GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP--NVKIVAYH 75 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcC--CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC--CCeEEEEe
Confidence 478888 58999999999999875 6888887654321 11 011111111111112221111 24556666
Q ss_pred cccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 84 GDILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.++.+..+ ....+++.|+||.+.
T Consensus 76 ~~i~~~~~------~~~f~~~~DvVv~a~ 98 (312)
T cd01489 76 ANIKDPDF------NVEFFKQFDLVFNAL 98 (312)
T ss_pred ccCCCccc------hHHHHhcCCEEEECC
Confidence 67665321 345667889998774
No 395
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.87 E-value=0.1 Score=36.32 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=29.6
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
+-.+++++++|.|| |-+|...++.|++.|. .|.++++
T Consensus 5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga---~V~VIs~ 41 (202)
T PRK06718 5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGA---HIVVISP 41 (202)
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEcC
Confidence 33478999999995 8899999999999985 5555554
No 396
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.80 E-value=0.024 Score=42.37 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=26.5
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
.+.++||+||+|++|...++-....|. ..+...++
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~--~~v~~~~s 176 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGA--TVVAVVSS 176 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC--cEEEEecC
Confidence 378999999999999998877777775 24444443
No 397
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.80 E-value=0.037 Score=40.52 Aligned_cols=37 Identities=22% Similarity=0.209 Sum_probs=30.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.++++++|.| +|+.+++++..|.+.|. .+|+++.|+.
T Consensus 123 ~~~k~vlvlG-aGGaarai~~aL~~~G~--~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIG-AGGTSRAAVYALASLGV--TDITVINRNP 159 (282)
T ss_pred cCCceEEEEc-CcHHHHHHHHHHHHcCC--CeEEEEeCCH
Confidence 4678899998 58889999999999865 6888888863
No 398
>PRK06932 glycerate dehydrogenase; Provisional
Probab=95.79 E-value=0.11 Score=38.76 Aligned_cols=88 Identities=14% Similarity=0.127 Sum_probs=51.5
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-C-HHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-T-PKARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
-+.++++.|.| .|.||+++++.+...|. +|++.+|..... . ....+.++.+ ..++..+.+
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~fg~---~V~~~~~~~~~~~~~~~~~l~ell~--------------~sDiv~l~~ 205 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQALGM---KVLYAEHKGASVCREGYTPFEEVLK--------------QADIVTLHC 205 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhcCCC---EEEEECCCcccccccccCCHHHHHH--------------hCCEEEEcC
Confidence 36889999999 79999999999977764 677776643211 0 0112222222 156666667
Q ss_pred ccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 85 DILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.++....++--.+..+.+++--++||.+
T Consensus 206 Plt~~T~~li~~~~l~~mk~ga~lIN~a 233 (314)
T PRK06932 206 PLTETTQNLINAETLALMKPTAFLINTG 233 (314)
T ss_pred CCChHHhcccCHHHHHhCCCCeEEEECC
Confidence 6666543333333444444444555554
No 399
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.79 E-value=0.018 Score=43.45 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=27.7
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+.++.|+||+|++|+++++.|.++. . .++..+.++
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p-~-~el~~~~~s 37 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHP-W-FEVTALAAS 37 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCC-C-ceEEEEEcC
Confidence 5799999999999999999998763 3 366666443
No 400
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.75 E-value=0.057 Score=39.61 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=30.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.++++++|.| +|+.|++++..|...|. .+|+++.|+.
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~--~~I~I~nR~~ 161 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGV--ERLTIFDVDP 161 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 4568999999 57799999999999864 6888888864
No 401
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.75 E-value=0.044 Score=38.80 Aligned_cols=74 Identities=19% Similarity=0.325 Sum_probs=48.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
|+++|.| .|-+|..+++.|.+.|++ |+++.+++. ++.+..+. ......+.+|-+++.
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~---Vv~Id~d~~------~~~~~~~~-------------~~~~~~v~gd~t~~~ 57 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHN---VVLIDRDEE------RVEEFLAD-------------ELDTHVVIGDATDED 57 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCc---eEEEEcCHH------HHHHHhhh-------------hcceEEEEecCCCHH
Confidence 4677777 778899999999999984 456665432 22221110 146778889988854
Q ss_pred CCCChhHHHHH-hccccEEEeccc
Q psy11862 91 LGIKDSDLLML-QEEVSVVFNGAA 113 (152)
Q Consensus 91 ~~~~~~~~~~~-~~~~d~vi~~a~ 113 (152)
-+.++ +..+|+++-.-+
T Consensus 58 ------~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 58 ------VLEEAGIDDADAVVAATG 75 (225)
T ss_pred ------HHHhcCCCcCCEEEEeeC
Confidence 35555 567888886544
No 402
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.73 E-value=0.13 Score=38.41 Aligned_cols=88 Identities=16% Similarity=0.124 Sum_probs=52.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH-HHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP-KARLAEFSKLPVFERLRKECPAQLSRLHIIEGD 85 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (152)
.+.++++.|.| .|.||+++++.+...|. +|++.+|....... ...+.++.+ ..++..+.+.
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~~fgm---~V~~~~~~~~~~~~~~~~l~ell~--------------~sDiv~l~lP 206 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAEAFGM---RVLIGQLPGRPARPDRLPLDELLP--------------QVDALTLHCP 206 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhCCC---EEEEECCCCCcccccccCHHHHHH--------------hCCEEEECCC
Confidence 36889999999 79999999999987764 77777765322110 111222222 1566666676
Q ss_pred cCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 86 ILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
++....++-..+..+.++.--++||.+
T Consensus 207 lt~~T~~li~~~~~~~mk~ga~lIN~a 233 (317)
T PRK06487 207 LTEHTRHLIGARELALMKPGALLINTA 233 (317)
T ss_pred CChHHhcCcCHHHHhcCCCCeEEEECC
Confidence 665543333333444444444555554
No 403
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.72 E-value=0.076 Score=37.80 Aligned_cols=40 Identities=28% Similarity=0.221 Sum_probs=32.5
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.++..+++|.| .|++|.++++.|++.|. .++.+++.+.
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~GV--g~i~LvD~D~ 45 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSGV--GKLTLIDFDV 45 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCCE
Confidence 3456778999998 78899999999999875 6888887654
No 404
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.70 E-value=0.064 Score=39.35 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=30.1
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
.++|++++|.|.++.+|+.++..|.+.|. .|.++.+
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~ga---tVtv~~s 190 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNA---SVTILHS 190 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeC
Confidence 37899999999999999999999998874 5555554
No 405
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.70 E-value=0.063 Score=39.39 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=30.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.++++++|.|+ ||.+++++..|.+.|. .+++++.|+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~ 161 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence 45788999995 8889999999998865 6888888853
No 406
>PRK14852 hypothetical protein; Provisional
Probab=95.65 E-value=0.059 Score=45.69 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=57.0
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHH----HHHHHhcC---hhhhhhhhhccccC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKA----RLAEFSKL---PVFERLRKECPAQL 76 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~----~~~~~~~~---~~~~~~~~~~~~~~ 76 (152)
++.++..+|+|.| .||+|.+++..|+..|. .++.+++-+.... ++.- ....+... .+.+.+....+ .
T Consensus 327 Q~kL~~srVlVvG-lGGlGs~ia~~LAraGV--G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP--~ 401 (989)
T PRK14852 327 QRRLLRSRVAIAG-LGGVGGIHLMTLARTGI--GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNP--F 401 (989)
T ss_pred HHHHhcCcEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCC--C
Confidence 4567788999998 78899999999999975 6787777553221 1100 00111100 11112221111 2
Q ss_pred CcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862 77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA 113 (152)
Q Consensus 77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~ 113 (152)
.+++.+...++. +.+..+++++|+||.+..
T Consensus 402 v~I~~~~~~I~~-------en~~~fl~~~DiVVDa~D 431 (989)
T PRK14852 402 LDIRSFPEGVAA-------ETIDAFLKDVDLLVDGID 431 (989)
T ss_pred CeEEEEecCCCH-------HHHHHHhhCCCEEEECCC
Confidence 455566555543 357788899999997653
No 407
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.64 E-value=0.12 Score=32.12 Aligned_cols=69 Identities=23% Similarity=0.301 Sum_probs=44.5
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
++|.|. |.+|..+++.|.+.+ ..++++.+++ +....+.. ..+.++.+|.++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~------~~~~~~~~---------------~~~~~i~gd~~~~~-- 53 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDP------ERVEELRE---------------EGVEVIYGDATDPE-- 53 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT---SEEEEEESSH------HHHHHHHH---------------TTSEEEES-TTSHH--
T ss_pred eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCc------HHHHHHHh---------------cccccccccchhhh--
Confidence 567774 689999999999965 3677777642 22333222 34778999999854
Q ss_pred CChhHHHHH-hccccEEEecc
Q psy11862 93 IKDSDLLML-QEEVSVVFNGA 112 (152)
Q Consensus 93 ~~~~~~~~~-~~~~d~vi~~a 112 (152)
.+.++ +++++.++-+.
T Consensus 54 ----~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 54 ----VLERAGIEKADAVVILT 70 (116)
T ss_dssp ----HHHHTTGGCESEEEEES
T ss_pred ----HHhhcCccccCEEEEcc
Confidence 35443 34778777554
No 408
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.61 E-value=0.083 Score=39.51 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=31.5
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR 48 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~ 48 (152)
-+.+|++.|.| .|.||+++++.+...| .+|+..+|++.
T Consensus 143 ~l~gktvGIiG-~GrIG~avA~r~~~Fg---m~v~y~~~~~~ 180 (324)
T COG1052 143 DLRGKTLGIIG-LGRIGQAVARRLKGFG---MKVLYYDRSPN 180 (324)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhcCC---CEEEEECCCCC
Confidence 36799999999 9999999999998554 38888888764
No 409
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.60 E-value=0.053 Score=40.88 Aligned_cols=38 Identities=32% Similarity=0.468 Sum_probs=28.5
Q ss_pred CCceEEEcCCcchhHHHHHHHHHh-hCCCCcEEEEeecC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLR-SCPDIGKVYILCRA 46 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~-~g~~~~~v~~~~r~ 46 (152)
+..++.|.|+||++|..+++.|.+ ...++..+..++..
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 346899999999999999999985 44555556555543
No 410
>PLN02928 oxidoreductase family protein
Probab=95.55 E-value=0.099 Score=39.48 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=30.7
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
.+.++++.|.| .|.||+++++.+...|. +|+..+|+
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~---~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRPFGV---KLLATRRS 191 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhhCCC---EEEEECCC
Confidence 36789999999 79999999999998875 77787775
No 411
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.55 E-value=0.029 Score=40.92 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=31.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
..+++++|+|+ |++|++++..|...|. .+|+++.|+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 56789999996 9999999999998863 5888888864
No 412
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.55 E-value=0.037 Score=42.02 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=26.7
Q ss_pred ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRA 46 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~ 46 (152)
+++.|.||||++|..+++.++++ ...+..+..++.+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 57899999999999999966554 4444456666554
No 413
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.50 E-value=0.12 Score=38.27 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=30.5
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.+.++++.|.| .|.||+++++.+...|. +|++.+|+.
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~afG~---~V~~~~r~~ 155 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAKAFGM---NIYAYTRSY 155 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 36789999999 79999999998777675 778888754
No 414
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.50 E-value=0.39 Score=35.52 Aligned_cols=104 Identities=12% Similarity=0.112 Sum_probs=62.9
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
+.|.|+ |++|..++..|+..|. +..++++++++.. +.....++ ...... ........ ++
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~-~~el~l~D~~~~~--~~g~~~DL---------~~~~~~-~~~~~i~~---~~---- 59 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGL-ASELVLVDVNEEK--AKGDALDL---------SHASAF-LATGTIVR---GG---- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccH--HHHHHHhH---------HHhccc-cCCCeEEE---CC----
Confidence 356785 7899999999988753 3478888875431 11111111 111110 01111111 11
Q ss_pred CChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 93 IKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 93 ~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
+ ...++++|+||.++|.... .++..+....|+.-...+.+...+.
T Consensus 60 ----~-~~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~ 105 (300)
T cd00300 60 ----D-YADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY 105 (300)
T ss_pred ----C-HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 2356789999999997543 3456678888999888888888876
No 415
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.49 E-value=0.057 Score=40.34 Aligned_cols=38 Identities=34% Similarity=0.425 Sum_probs=30.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++++.|.|+||-+|+.+++.|.++.+.+..+.++...+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 36889999999999999999999656776666665443
No 416
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.42 E-value=0.066 Score=39.35 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=30.8
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.+.+++++|.|. |.+|+.+++.|...|. +|++..|+.
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~---~V~v~~R~~ 184 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGA---RVFVGARSS 184 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 357899999996 7799999999999875 678888753
No 417
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.42 E-value=0.15 Score=37.15 Aligned_cols=39 Identities=23% Similarity=0.336 Sum_probs=31.9
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.+...+|+|.| .|++|.++++.|++.|. .++.+++.+.
T Consensus 26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~GV--g~itLiD~D~ 64 (268)
T PRK15116 26 QLFADAHICVVG-IGGVGSWAAEALARTGI--GAITLIDMDD 64 (268)
T ss_pred HHhcCCCEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCE
Confidence 456778999998 77899999999999875 5788887653
No 418
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.41 E-value=0.12 Score=34.71 Aligned_cols=34 Identities=32% Similarity=0.435 Sum_probs=26.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC 44 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~ 44 (152)
++|++++|.|.+..+|+.++..|.++|. .|..+.
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a---tVt~~h 67 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA---TVTICH 67 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT----EEEEE-
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCC---eEEecc
Confidence 6899999999999999999999999974 554443
No 419
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=95.39 E-value=0.3 Score=36.07 Aligned_cols=104 Identities=16% Similarity=0.093 Sum_probs=59.0
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG 92 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 92 (152)
|.|.|+ |.+|..++..++..|.. .|+++++++.... .+.+ ++. ...........+. .+.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~-g~~~-dl~---------~~~~~~~~~~~I~---~t~---- 59 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQ-GKAL-DIS---------QAAPILGSDTKVT---GTN---- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHH-HHHH-HHH---------HhhhhcCCCeEEE---EcC----
Confidence 457887 99999999998887643 7888888643110 0111 110 0000000111111 111
Q ss_pred CChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862 93 IKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM 142 (152)
Q Consensus 93 ~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (152)
+.. .++++|+||.+++.... ..+..+.+..|+.....+++...+.
T Consensus 60 ----d~~-~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 60 ----DYE-DIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred ----CHH-HhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 122 35889999999986543 2333446667787777777777665
No 420
>PLN02306 hydroxypyruvate reductase
Probab=95.36 E-value=0.21 Score=38.28 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=29.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~ 47 (152)
+.++++.|.| .|.||+++++.+. ..|. +|++.++..
T Consensus 163 L~gktvGIiG-~G~IG~~vA~~l~~~fGm---~V~~~d~~~ 199 (386)
T PLN02306 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKM---NLIYYDLYQ 199 (386)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhcCCC---EEEEECCCC
Confidence 6789999999 8999999999985 5553 778887654
No 421
>PRK06153 hypothetical protein; Provisional
Probab=95.28 E-value=0.044 Score=41.81 Aligned_cols=40 Identities=13% Similarity=0.253 Sum_probs=33.4
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++.+++.+|+|.| .|++|++++..|++.|. .++.+++.+.
T Consensus 171 q~kL~~~~VaIVG-~GG~GS~Va~~LAR~GV--geI~LVD~D~ 210 (393)
T PRK06153 171 SAKLEGQRIAIIG-LGGTGSYILDLVAKTPV--REIHLFDGDD 210 (393)
T ss_pred HHHHhhCcEEEEc-CCccHHHHHHHHHHcCC--CEEEEECCCE
Confidence 4567888999999 78899999999999864 7888887653
No 422
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.28 E-value=0.036 Score=38.94 Aligned_cols=34 Identities=35% Similarity=0.390 Sum_probs=28.6
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
|+|.|.||+|.+|..++..|.+.|+ .|.+.+|++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~---~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN---KIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC---EEEEEEcCH
Confidence 4789999999999999999999986 556667754
No 423
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=95.23 E-value=0.15 Score=38.13 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=28.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~ 47 (152)
+.++++.|.| .|.||+++++.+. ..| . +|+..+|..
T Consensus 143 L~gktvGIiG-~G~IG~~va~~l~~~fg--m-~V~~~~~~~ 179 (323)
T PRK15409 143 VHHKTLGIVG-MGRIGMALAQRAHFGFN--M-PILYNARRH 179 (323)
T ss_pred CCCCEEEEEc-ccHHHHHHHHHHHhcCC--C-EEEEECCCC
Confidence 6889999999 7999999999986 555 3 667776653
No 424
>PLN00203 glutamyl-tRNA reductase
Probab=95.18 E-value=0.1 Score=41.56 Aligned_cols=37 Identities=35% Similarity=0.516 Sum_probs=31.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.+++++|.|+ |.+|..+++.|...|. ..|+++.|+.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~ 300 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSE 300 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence 66899999997 9999999999998864 5788888863
No 425
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=95.17 E-value=0.21 Score=38.17 Aligned_cols=87 Identities=16% Similarity=0.215 Sum_probs=51.5
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH---HHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP---KARLAEFSKLPVFERLRKECPAQLSRLHIIEG 84 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+.++++.|.| .|.||+.+++.+...|. +|+..++....... ...+.++.+ ..++.++.+
T Consensus 114 L~gktvGIIG-~G~IG~~vA~~l~a~G~---~V~~~dp~~~~~~~~~~~~~L~ell~--------------~sDiI~lh~ 175 (378)
T PRK15438 114 LHDRTVGIVG-VGNVGRRLQARLEALGI---KTLLCDPPRADRGDEGDFRSLDELVQ--------------EADILTFHT 175 (378)
T ss_pred cCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCcccccccccccCCHHHHHh--------------hCCEEEEeC
Confidence 6789999999 79999999999998885 66666653221100 011222221 156777667
Q ss_pred ccCCC----CCCCChhHHHHHhccccEEEecc
Q psy11862 85 DILQA----NLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 85 D~~~~----~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.+++. ..++-.++..+.+++--++||.+
T Consensus 176 PLt~~g~~~T~~li~~~~l~~mk~gailIN~a 207 (378)
T PRK15438 176 PLFKDGPYKTLHLADEKLIRSLKPGAILINAC 207 (378)
T ss_pred CCCCCcccccccccCHHHHhcCCCCcEEEECC
Confidence 76663 33333333444445445666654
No 426
>PRK07574 formate dehydrogenase; Provisional
Probab=95.08 E-value=0.091 Score=40.25 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=30.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.++++.|.| .|.||+.+++.|...|. +|+..+|..
T Consensus 190 L~gktVGIvG-~G~IG~~vA~~l~~fG~---~V~~~dr~~ 225 (385)
T PRK07574 190 LEGMTVGIVG-AGRIGLAVLRRLKPFDV---KLHYTDRHR 225 (385)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEECCCC
Confidence 6789999999 68999999999998875 778888764
No 427
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.07 E-value=0.21 Score=38.57 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=30.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.++++.|.| .|.||+.+++.+...|. +|+..++..
T Consensus 149 L~gktvGIiG-~G~IG~~vA~~~~~fGm---~V~~~d~~~ 184 (409)
T PRK11790 149 VRGKTLGIVG-YGHIGTQLSVLAESLGM---RVYFYDIED 184 (409)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEECCCc
Confidence 6889999999 79999999999988875 778887653
No 428
>PRK07877 hypothetical protein; Provisional
Probab=95.04 E-value=0.093 Score=43.38 Aligned_cols=97 Identities=10% Similarity=0.110 Sum_probs=57.5
Q ss_pred ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH----HHHhcC---hhhhhhhhhccccCC
Q psy11862 5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL----AEFSKL---PVFERLRKECPAQLS 77 (152)
Q Consensus 5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~ 77 (152)
++.++..+|+|.|. | +|.+++..|+..|- +.++.+++.+....+-.++. ..+... ..-+.+.... ..-
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in--p~i 176 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD--PYL 176 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC--CCC
Confidence 45678889999999 6 99999999999862 25788877664332222221 000000 0001111111 124
Q ss_pred cEEEEEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862 78 RLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA 113 (152)
Q Consensus 78 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~ 113 (152)
+++.+...++. +++..+++++|+|+.|.-
T Consensus 177 ~v~~~~~~i~~-------~n~~~~l~~~DlVvD~~D 205 (722)
T PRK07877 177 PVEVFTDGLTE-------DNVDAFLDGLDVVVEECD 205 (722)
T ss_pred EEEEEeccCCH-------HHHHHHhcCCCEEEECCC
Confidence 55666666653 358888899999998853
No 429
>PRK04148 hypothetical protein; Provisional
Probab=95.04 E-value=0.3 Score=31.71 Aligned_cols=69 Identities=14% Similarity=0.190 Sum_probs=46.8
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
+++++++.|.+ -|.+++..|.+.|+ .|.+++.++. .+..... ..+.++.+|+.+
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~---~ViaIDi~~~------aV~~a~~---------------~~~~~v~dDlf~ 69 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGF---DVIVIDINEK------AVEKAKK---------------LGLNAFVDDLFN 69 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH---------------hCCeEEECcCCC
Confidence 45789999954 68888999999886 6778776533 1222111 346788999999
Q ss_pred CCCCCChhHHHHHhccccEEEec
Q psy11862 89 ANLGIKDSDLLMLQEEVSVVFNG 111 (152)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~vi~~ 111 (152)
+. .++.+++|.|+..
T Consensus 70 p~--------~~~y~~a~liysi 84 (134)
T PRK04148 70 PN--------LEIYKNAKLIYSI 84 (134)
T ss_pred CC--------HHHHhcCCEEEEe
Confidence 86 3445677777653
No 430
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=94.98 E-value=0.23 Score=40.50 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=31.7
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.++..+|+|.| .|++|.++++.|+..|. .++.+++...
T Consensus 334 ekL~~~kVLIvG-aGGLGs~VA~~La~~GV--g~ItlVD~D~ 372 (664)
T TIGR01381 334 ERYSQLKVLLLG-AGTLGCNVARCLIGWGV--RHITFVDNGK 372 (664)
T ss_pred HHHhcCeEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCE
Confidence 456788999998 67899999999999754 7888887653
No 431
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=94.97 E-value=0.23 Score=35.39 Aligned_cols=33 Identities=27% Similarity=0.360 Sum_probs=27.2
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+++|.| .|++|.++++.|+..|. .++.+++.+.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gv--g~i~ivD~D~ 33 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGF--GQIHVIDMDT 33 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence 467777 78999999999999876 6888888764
No 432
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.94 E-value=0.047 Score=43.55 Aligned_cols=35 Identities=31% Similarity=0.361 Sum_probs=30.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+++++++|+|+ |++|++++..|.+.|. +|+++.|+
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~---~V~i~nR~ 411 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGA---RVVIANRT 411 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEcCC
Confidence 56789999998 7999999999999975 67777774
No 433
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.80 E-value=0.17 Score=37.70 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=30.3
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.++++.|.| .|.||+.+++.|...|. +|++.+|..
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~---~V~~~~~~~ 169 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGF---PLRCWSRSR 169 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEeCCC
Confidence 5789999998 89999999999998885 667777654
No 434
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.77 E-value=0.2 Score=38.90 Aligned_cols=75 Identities=21% Similarity=0.255 Sum_probs=47.8
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ 88 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 88 (152)
..++++|.|+ |.+|..+++.|.+.|+ .++++++++. .+..+... ..++.++.+|.++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~---~v~vid~~~~------~~~~~~~~-------------~~~~~~i~gd~~~ 286 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGY---SVKLIERDPE------RAEELAEE-------------LPNTLVLHGDGTD 286 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHH------HHHHHHHH-------------CCCCeEEECCCCC
Confidence 4678999996 9999999999999876 5566665422 22222110 1356678888877
Q ss_pred CCCCCChhHHH-HHhccccEEEecc
Q psy11862 89 ANLGIKDSDLL-MLQEEVSVVFNGA 112 (152)
Q Consensus 89 ~~~~~~~~~~~-~~~~~~d~vi~~a 112 (152)
++ .+. .-+.++|.+|-+.
T Consensus 287 ~~------~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 287 QE------LLEEEGIDEADAFIALT 305 (453)
T ss_pred HH------HHHhcCCccCCEEEECC
Confidence 54 343 2234677776543
No 435
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.72 E-value=0.047 Score=40.61 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=30.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
.++.| |+||-+|+.+.+.|.+++..+..++++...
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 47889 999999999999999988888888877653
No 436
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=94.71 E-value=0.27 Score=34.05 Aligned_cols=34 Identities=18% Similarity=0.349 Sum_probs=29.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC 44 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~ 44 (152)
++|++++|.|.+.-+|+.++..|+++|. .|..+.
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~A---tVti~~ 93 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGA---RVYSVD 93 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC---EEEEEe
Confidence 7899999999999999999999999874 566553
No 437
>PRK06849 hypothetical protein; Provisional
Probab=94.60 E-value=0.079 Score=40.46 Aligned_cols=36 Identities=19% Similarity=0.174 Sum_probs=30.7
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.|+|||||+...+|..+++.|.+.|+ +|++++..+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~---~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH---TVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 468999999999999999999999987 667776543
No 438
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.59 E-value=0.086 Score=36.63 Aligned_cols=37 Identities=30% Similarity=0.334 Sum_probs=30.4
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
..+++++++|+|. |.+|+++++.|.+.|+ +|+..+++
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~---~Vvv~D~~ 60 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGA---KLIVADIN 60 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCC
Confidence 3578899999996 5899999999999986 56666654
No 439
>PLN03139 formate dehydrogenase; Provisional
Probab=94.58 E-value=0.16 Score=38.90 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=30.9
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
-+.++++.|.| .|.||+.+++.|...|. +|+..+|..
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~---~V~~~d~~~ 232 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNC---NLLYHDRLK 232 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 36889999999 79999999999998875 667777753
No 440
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=94.55 E-value=0.37 Score=35.55 Aligned_cols=88 Identities=15% Similarity=0.136 Sum_probs=49.5
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQLSRLHIIE 83 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
+|+|.| .|++|.++++.|+..|. .++.+++.+.... ++ .+.+...+.....+.+....+ ..++..+.
T Consensus 1 kVlVVG-aGGlG~eilknLal~Gv--g~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np--~v~I~~~~ 75 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSGF--RNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP--GVNVTPHF 75 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC--CCEEEEEe
Confidence 477887 78899999999999875 6888877543221 11 111111111111112222111 24566666
Q ss_pred cccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862 84 GDILQANLGIKDSDLLMLQEEVSVVFNGA 112 (152)
Q Consensus 84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 112 (152)
.++.+. -...+++.|+||.+.
T Consensus 76 ~~i~~~--------~~~f~~~fdvVi~al 96 (291)
T cd01488 76 GKIQDK--------DEEFYRQFNIIICGL 96 (291)
T ss_pred cccCch--------hHHHhcCCCEEEECC
Confidence 666542 245667889998764
No 441
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.51 E-value=0.18 Score=37.34 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=30.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+.|+++.|.|.++.+|+.++..|++.|+ .|.++.|.
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga---tVtv~~~~ 192 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHC---SVTVVHSR 192 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEECCC
Confidence 6899999999999999999999999986 56666543
No 442
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=94.49 E-value=0.12 Score=39.18 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=29.0
Q ss_pred ceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAK 47 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~ 47 (152)
+++.|.|+||-+|+.+++.|. +....+..++.++.+.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~ 38 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQ 38 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchh
Confidence 368899999999999999998 5566656677776543
No 443
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=94.47 E-value=0.039 Score=40.72 Aligned_cols=36 Identities=31% Similarity=0.292 Sum_probs=30.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.+++++|.|. |.+|+.++..|...|. +|.+++|+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga---~V~v~~r~~ 185 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGA---NVTVGARKS 185 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 46899999995 7799999999998874 778888763
No 444
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.44 E-value=0.35 Score=37.88 Aligned_cols=40 Identities=20% Similarity=0.301 Sum_probs=31.3
Q ss_pred cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+..++.+++++|.| .|..|.++++.|.+.|+ .|...++++
T Consensus 8 ~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G~---~V~~~D~~~ 47 (458)
T PRK01710 8 FKKFIKNKKVAVVG-IGVSNIPLIKFLVKLGA---KVTAFDKKS 47 (458)
T ss_pred HhhhhcCCeEEEEc-ccHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 34566788999988 67789999999999997 567777654
No 445
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=94.43 E-value=0.13 Score=39.88 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=30.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.+++++|.|+ |.+|..+++.|...|. ..|++..|+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 57789999985 9999999999988764 5778888753
No 446
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=94.41 E-value=0.38 Score=32.29 Aligned_cols=35 Identities=29% Similarity=0.323 Sum_probs=25.7
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
.+.+|+++|+| -|.+|+.+++.|...|. +|.+...
T Consensus 20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga---~V~V~e~ 54 (162)
T PF00670_consen 20 MLAGKRVVVIG-YGKVGKGIARALRGLGA---RVTVTEI 54 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT----EEEEE-S
T ss_pred eeCCCEEEEeC-CCcccHHHHHHHhhCCC---EEEEEEC
Confidence 46889999998 89999999999999984 6666655
No 447
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=94.32 E-value=0.59 Score=34.66 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=25.7
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+|+|.| .|++|.++++.|+..|. .++.+++.+
T Consensus 1 kVLIvG-aGGLGs~vA~~La~aGV--g~ItlvD~D 32 (307)
T cd01486 1 KCLLLG-AGTLGCNVARNLLGWGV--RHITFVDSG 32 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCC
Confidence 477877 67899999999998764 688887754
No 448
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=94.27 E-value=0.15 Score=39.48 Aligned_cols=38 Identities=34% Similarity=0.555 Sum_probs=31.2
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.+.+++++|.|+ |.+|..+++.|...|. ..|++..|+.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~--~~V~v~~rs~ 214 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGV--GKILIANRTY 214 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 367889999995 9999999999988763 5788888754
No 449
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=94.25 E-value=0.36 Score=36.81 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=28.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+...+++|.|+ |.+|...++.+...|. +|.+++|+
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa---~V~v~d~~ 199 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGA---TVTILDIN 199 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCC---eEEEEECC
Confidence 34567999985 8899999999999874 57777775
No 450
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.23 E-value=0.24 Score=36.59 Aligned_cols=36 Identities=28% Similarity=0.447 Sum_probs=30.7
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRA 46 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~ 46 (152)
++|++++|.|.++.+|+.++..|++.|+ .|.++ .|+
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~---tVtv~~~rT 192 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANA---TVTIAHSRT 192 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCC---EEEEECCCC
Confidence 6899999999999999999999999986 55555 354
No 451
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=93.99 E-value=0.2 Score=37.26 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=29.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.+++++|.|+ |.+|..+++.|...|. ..|++.+|+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~--~~V~v~~r~~ 212 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV--AEITIANRTY 212 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 56899999986 9999999999988653 5788888753
No 452
>KOG4022|consensus
Probab=93.98 E-value=1.3 Score=30.06 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=27.0
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEE
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVY 41 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~ 41 (152)
...+++|-||-|.+|++++..+...+|-|..|.
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siD 34 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSID 34 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEe
Confidence 346899999999999999999999988544333
No 453
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=93.97 E-value=0.44 Score=38.11 Aligned_cols=36 Identities=17% Similarity=0.137 Sum_probs=30.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.++++.|.| .|.||+.+++.+...|. +|+.++|..
T Consensus 138 l~gktvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~~ 173 (526)
T PRK13581 138 LYGKTLGIIG-LGRIGSEVAKRAKAFGM---KVIAYDPYI 173 (526)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEECCCC
Confidence 6789999999 68999999999998875 778887753
No 454
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.94 E-value=0.3 Score=36.04 Aligned_cols=27 Identities=19% Similarity=0.489 Sum_probs=25.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSC 34 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g 34 (152)
+.|++++|.|.+..+|+.++..|.++|
T Consensus 155 l~GK~vvViGrS~iVGkPla~lL~~~~ 181 (293)
T PRK14185 155 TSGKKCVVLGRSNIVGKPMAQLMMQKA 181 (293)
T ss_pred CCCCEEEEECCCccchHHHHHHHHcCC
Confidence 689999999999999999999999874
No 455
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=93.93 E-value=0.59 Score=35.84 Aligned_cols=36 Identities=28% Similarity=0.186 Sum_probs=29.6
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
.+.++++.|.| .|.||+.+++.+...|. +|++.++.
T Consensus 113 ~l~gktvGIIG-~G~IG~~va~~l~a~G~---~V~~~Dp~ 148 (381)
T PRK00257 113 DLAERTYGVVG-AGHVGGRLVRVLRGLGW---KVLVCDPP 148 (381)
T ss_pred CcCcCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEECCc
Confidence 36789999999 78899999999998886 66776653
No 456
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.90 E-value=0.13 Score=37.38 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=29.1
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
++++++|+|+ |++|++++..|.+.|. .|.+..|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~---~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADC---NVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4789999997 7999999999998874 677777753
No 457
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=93.88 E-value=0.42 Score=38.19 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=30.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+.++++.|.| .|.||+.+++.|...|. +|+..++.
T Consensus 136 l~gktvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~ 170 (525)
T TIGR01327 136 LYGKTLGVIG-LGRIGSIVAKRAKAFGM---KVLAYDPY 170 (525)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEECCC
Confidence 6789999999 79999999999998875 67777764
No 458
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.73 E-value=0.37 Score=35.42 Aligned_cols=28 Identities=21% Similarity=0.455 Sum_probs=25.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
+.|++++|.|.+..+|+.++..|.++|.
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~a 189 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRNA 189 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCC
Confidence 6899999999999999999999998874
No 459
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=93.72 E-value=0.14 Score=35.78 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=25.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+|++.| ||+|.+|..++++|.+.|+ .|++.+|+.
T Consensus 1 m~~~~i-~GtGniG~alA~~~a~ag~---eV~igs~r~ 34 (211)
T COG2085 1 MMIIAI-IGTGNIGSALALRLAKAGH---EVIIGSSRG 34 (211)
T ss_pred CcEEEE-eccChHHHHHHHHHHhCCC---eEEEecCCC
Confidence 355665 6699999999999999997 445554443
No 460
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.69 E-value=0.12 Score=40.31 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=28.9
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
|++.|.||.|.+|..+++.|.+.|+ .|.+.+|++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~---~V~v~~r~~ 34 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF---EVIVTGRDP 34 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC---EEEEEECCh
Confidence 4789999999999999999999886 567777754
No 461
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=93.68 E-value=0.39 Score=38.89 Aligned_cols=89 Identities=16% Similarity=0.136 Sum_probs=54.8
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI 86 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (152)
..+..+|+|.| .|+.|.+++..|+..|. ..+.+++-+.. .+...++.++.+. . ....+.+.+...|.
T Consensus 126 ~qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIgEl~e~------A---~~~n~~v~v~~i~~ 192 (637)
T TIGR03693 126 LSRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIHELAEI------A---EETDDALLVQEIDF 192 (637)
T ss_pred hhhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHHHHHHH------H---HHhCCCCceEeccC
Confidence 34567899999 67779999999999987 46666644333 2223333332110 0 01124454444554
Q ss_pred CCCCCCCChhHHHHHhccccEEEecccc
Q psy11862 87 LQANLGIKDSDLLMLQEEVSVVFNGAAS 114 (152)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 114 (152)
++. +++...+++.|.|++.+.-
T Consensus 193 ~~~------~dl~ev~~~~DiVi~vsDd 214 (637)
T TIGR03693 193 AED------QHLHEAFEPADWVLYVSDN 214 (637)
T ss_pred Ccc------hhHHHhhcCCcEEEEECCC
Confidence 433 3689999999999998753
No 462
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.60 E-value=0.77 Score=35.75 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=29.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR 48 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~ 48 (152)
+.+++++|+|. |++|.++++.|.+.|+ .|.+.+..+.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~---~v~~~d~~~~ 39 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGA---EVAAYDAELK 39 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCCC
Confidence 45789999996 5899999999999986 5666665443
No 463
>KOG2013|consensus
Probab=93.59 E-value=0.33 Score=38.13 Aligned_cols=38 Identities=24% Similarity=0.239 Sum_probs=30.6
Q ss_pred cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+..++.+||+.| .||||-++.+.|+..|. ..|++++-+
T Consensus 8 eai~~~riLvVG-aGGIGCELLKnLal~gf--~~IhiIDlD 45 (603)
T KOG2013|consen 8 EAIKSGRILVVG-AGGIGCELLKNLALTGF--EEIHIIDLD 45 (603)
T ss_pred HHhccCeEEEEe-cCcccHHHHHHHHHhcC--CeeEEEecc
Confidence 345678999999 67899999999999877 578777754
No 464
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.57 E-value=0.36 Score=35.50 Aligned_cols=28 Identities=39% Similarity=0.587 Sum_probs=25.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
++|++++|.|.+..+|+.++..|.+++.
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~~a 180 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLREDA 180 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC
Confidence 6899999999999999999999998864
No 465
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.57 E-value=0.37 Score=35.40 Aligned_cols=26 Identities=31% Similarity=0.322 Sum_probs=24.1
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhh
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRS 33 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~ 33 (152)
+.|++++|.|.+..+|+.++..|.+.
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~ 181 (284)
T PRK14193 156 LAGAHVVVIGRGVTVGRPIGLLLTRR 181 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHhhc
Confidence 57999999999999999999999883
No 466
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.52 E-value=0.18 Score=39.12 Aligned_cols=36 Identities=28% Similarity=0.317 Sum_probs=30.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+.+++++|+| .|.+|+.++..+...|. +|++.++++
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga---~ViV~d~dp 245 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGLGA---RVIVTEVDP 245 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEEcCCc
Confidence 5789999999 58999999999998875 677777654
No 467
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=93.51 E-value=0.25 Score=29.28 Aligned_cols=35 Identities=31% Similarity=0.407 Sum_probs=29.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
+.+++++|.|. |..|..++..|.+.+. .++++.+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~--~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGG--KKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcC
Confidence 67889999997 9999999999999842 47777766
No 468
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.49 E-value=0.38 Score=35.57 Aligned_cols=28 Identities=32% Similarity=0.432 Sum_probs=25.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
++|++++|.|.+..+|+.++..|.++|.
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~~a 183 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAANA 183 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC
Confidence 6899999999999999999999998864
No 469
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.47 E-value=0.47 Score=34.86 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=28.4
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC 44 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~ 44 (152)
+.|++++|.|.+..+|+.++..|.++|. .|..+.
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~a---tVtv~h 190 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGC---TVTVCH 190 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCC---eEEEEE
Confidence 6799999999999999999999998864 444443
No 470
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.47 E-value=0.28 Score=36.85 Aligned_cols=37 Identities=14% Similarity=0.034 Sum_probs=31.0
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
-+.++++.|.| .|.+|+.+++.|...|. +|++.+|+.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~---~V~~~d~~~ 179 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGA---TITAYDAYP 179 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEEeCCh
Confidence 36788999998 78999999999998885 677888764
No 471
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.43 E-value=0.59 Score=30.63 Aligned_cols=36 Identities=33% Similarity=0.422 Sum_probs=30.1
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
.++|++++|.|.+.-+|..++..|.++|. .|..+.+
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~ga---tV~~~~~ 60 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGA---TVYSCDW 60 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeCC
Confidence 36899999999999999999999999874 5555543
No 472
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.36 E-value=0.42 Score=35.08 Aligned_cols=28 Identities=21% Similarity=0.453 Sum_probs=25.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
++|++++|.|.+..+|+.++..|.++|.
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~a 181 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDA 181 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC
Confidence 6899999999999999999999998864
No 473
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.35 E-value=0.43 Score=35.02 Aligned_cols=29 Identities=24% Similarity=0.334 Sum_probs=26.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
.++|++++|.|.+..+|+.++..|.+++.
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~A 183 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKA 183 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence 36799999999999999999999998864
No 474
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.28 E-value=0.42 Score=35.12 Aligned_cols=28 Identities=25% Similarity=0.458 Sum_probs=25.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
+.|++++|.|.+..+|+.++..|.+++.
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~a 182 (284)
T PRK14170 155 IEGKRAVVIGRSNIVGKPVAQLLLNENA 182 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence 6899999999999999999999998864
No 475
>PRK08605 D-lactate dehydrogenase; Validated
Probab=93.25 E-value=1.1 Score=33.60 Aligned_cols=38 Identities=18% Similarity=0.086 Sum_probs=28.8
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
.+.++++.|.| .|.+|+++++.|.+ +.++ +|+..+++.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~-~~g~-~V~~~d~~~ 180 (332)
T PRK08605 143 SIKDLKVAVIG-TGRIGLAVAKIFAK-GYGS-DVVAYDPFP 180 (332)
T ss_pred eeCCCEEEEEC-CCHHHHHHHHHHHh-cCCC-EEEEECCCc
Confidence 36789999999 78999999999954 2333 677777654
No 476
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=93.21 E-value=0.15 Score=38.84 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=30.1
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
..+++.|.||.|.+|..+++.|.+.|+ .|.+.+|+.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~---~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGY---QVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCC---eEEEeCCCc
Confidence 347899999999999999999999987 566777653
No 477
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.17 E-value=0.51 Score=34.69 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=26.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
+.|++++|.|.+..+|+.++..|.++|.
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gA 182 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGA 182 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC
Confidence 6799999999999999999999999875
No 478
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.15 E-value=0.53 Score=34.60 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=26.3
Q ss_pred ccCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
.+.|++++|.|.+..+|+.++..|.+++.
T Consensus 156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~a 184 (284)
T PRK14177 156 DVTGKNAVVVGRSPILGKPMAMLLTEMNA 184 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence 36899999999999999999999998864
No 479
>PRK06444 prephenate dehydrogenase; Provisional
Probab=93.13 E-value=0.088 Score=36.53 Aligned_cols=27 Identities=22% Similarity=0.314 Sum_probs=24.2
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDI 37 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~ 37 (152)
+++.|.||+|.+|+.+++.|.+.|+.|
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v 27 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGV 27 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEE
Confidence 478999999999999999999988854
No 480
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.12 E-value=0.62 Score=33.07 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=28.0
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRA 46 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~ 46 (152)
|+.+++.|.| +|.+|.+++..|.+.+ .++..+++..|+
T Consensus 2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 3467899998 6899999999998875 334346666653
No 481
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=93.11 E-value=0.75 Score=32.10 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=27.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
+++++++|.| +|.+|..-++.|++.|. .|.+++.
T Consensus 7 l~gk~vlVvG-gG~va~rk~~~Ll~~ga---~VtVvsp 40 (205)
T TIGR01470 7 LEGRAVLVVG-GGDVALRKARLLLKAGA---QLRVIAE 40 (205)
T ss_pred cCCCeEEEEC-cCHHHHHHHHHHHHCCC---EEEEEcC
Confidence 7889999999 67889999999999985 5555554
No 482
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.09 E-value=0.51 Score=34.68 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=28.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL 43 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~ 43 (152)
+.|++++|.|.++.+|+.++..|.++|. .|..+
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~a---tVt~~ 188 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA---TVTIC 188 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEe
Confidence 5899999999999999999999999874 55443
No 483
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.09 E-value=0.42 Score=35.14 Aligned_cols=29 Identities=24% Similarity=0.454 Sum_probs=26.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPD 36 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~ 36 (152)
+.|+++.|.|.+|.+|+.++..|++.|+.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gat 184 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNAT 184 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCE
Confidence 68999999999999999999999999863
No 484
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=93.00 E-value=0.38 Score=27.93 Aligned_cols=34 Identities=35% Similarity=0.475 Sum_probs=27.0
Q ss_pred eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC
Q psy11862 12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG 49 (152)
Q Consensus 12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~ 49 (152)
+++|.| +|++|.+++..|.+.|. +|.++.|++..
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g~---~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELGK---EVTLIERSDRL 34 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTTS---EEEEEESSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHhCc---EEEEEeccchh
Confidence 356666 89999999999999874 77888887643
No 485
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=92.97 E-value=0.24 Score=31.97 Aligned_cols=47 Identities=19% Similarity=0.219 Sum_probs=32.4
Q ss_pred EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHh
Q psy11862 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60 (152)
Q Consensus 13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~ 60 (152)
+.|.|+||.||...+.-+.+...+ -+|+.++-..+.+.+.+...++.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~-f~v~~Lsa~~n~~~L~~q~~~f~ 47 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDK-FEVVALSAGSNIEKLAEQAREFK 47 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTT-EEEEEEEESSTHHHHHHHHHHHT
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCc-eEEEEEEcCCCHHHHHHHHHHhC
Confidence 578999999999988888887433 47777775444344444445543
No 486
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=92.96 E-value=0.17 Score=38.08 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=24.1
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL 43 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~ 43 (152)
+++.|+|++|++|.++++.|.++. .+ .+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~-~~-~l~~v 31 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHP-YF-ELAKV 31 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-Cc-eEEEE
Confidence 378999999999999999887763 34 44444
No 487
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.92 E-value=0.61 Score=34.16 Aligned_cols=28 Identities=29% Similarity=0.502 Sum_probs=25.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
++|++++|.|.+..+|+.++..|.++|.
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~A 183 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNENA 183 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC
Confidence 6899999999999999999999998864
No 488
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=92.89 E-value=0.51 Score=37.95 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=46.1
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN 90 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 90 (152)
..++|.| .|.+|+++++.|.++|+ .+++++++ .++.++... .+...+.+|.++++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~---~vvvId~d------~~~~~~~~~---------------~g~~~i~GD~~~~~ 472 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGI---PLVVIETS------RTRVDELRE---------------RGIRAVLGNAANEE 472 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCC---CEEEEECC------HHHHHHHHH---------------CCCeEEEcCCCCHH
Confidence 3677877 78899999999999986 45666653 223333321 46778899998865
Q ss_pred CCCChhHHHHH-hccccEEEec
Q psy11862 91 LGIKDSDLLML-QEEVSVVFNG 111 (152)
Q Consensus 91 ~~~~~~~~~~~-~~~~d~vi~~ 111 (152)
.+++. ++++|.++-+
T Consensus 473 ------~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 473 ------IMQLAHLDCARWLLLT 488 (558)
T ss_pred ------HHHhcCccccCEEEEE
Confidence 23332 3467766643
No 489
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=92.88 E-value=0.48 Score=36.06 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=28.3
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR 48 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~ 48 (152)
+++++|.|+ |.+|+.++.+..+.|+ ++++++.++.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~---~v~~~d~~~~ 36 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGY---KVIVLDPDPD 36 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCCC
Confidence 478999996 6899999999999987 6777776543
No 490
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=92.82 E-value=2.7 Score=30.54 Aligned_cols=35 Identities=11% Similarity=0.163 Sum_probs=25.0
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA 46 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~ 46 (152)
+++.|.| .|.+|..+++.+.+.+.++..+.+++|+
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~ 36 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN 36 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC
Confidence 5788989 6999999999998763244344555553
No 491
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=92.80 E-value=0.03 Score=36.08 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=22.0
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCC
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDI 37 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~ 37 (152)
...+|-|.|+ |.+|.++.+.|.+.|+.+
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v 36 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGHEV 36 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTSEE
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCCeE
Confidence 3468889995 899999999999999743
No 492
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.77 E-value=0.66 Score=34.10 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=28.2
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL 43 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~ 43 (152)
++|++++|.|.+..+|+.++..|.+++. .|..+
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~~a---tVt~c 188 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNENA---TVTYC 188 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEE
Confidence 6899999999999999999999998864 45444
No 493
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=92.74 E-value=0.26 Score=34.91 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=31.9
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~ 47 (152)
+++++++|.|+ |+.|..++..|...|.+..++++++|+.
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~g 61 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKG 61 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCC
Confidence 67789999996 8899999999998865212899999973
No 494
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=92.73 E-value=0.23 Score=36.96 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=26.6
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
+.+|.|.|++|+.|.++++.|.++ +.+ .+..+..
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~h-p~~-~l~~~~s 35 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGR-SDI-ELLSIPE 35 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcC-CCe-EEEEEec
Confidence 458899999999999999988887 455 4544443
No 495
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=92.70 E-value=0.19 Score=37.36 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=26.8
Q ss_pred ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45 (152)
Q Consensus 11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r 45 (152)
-+|.|.|++|+.|.++++.|..+ +++..+.+.++
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~H-P~~el~~l~s~ 35 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGR-DDIELLSIAPD 35 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCC-CCeEEEEEecc
Confidence 37899999999999999999998 56644444444
No 496
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.68 E-value=0.62 Score=34.27 Aligned_cols=26 Identities=31% Similarity=0.549 Sum_probs=24.6
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhh
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRS 33 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~ 33 (152)
++|++++|.|.+..+|+.++..|.++
T Consensus 151 l~Gk~vvViGrS~iVGkPla~lL~~~ 176 (287)
T PRK14181 151 LHGRHVAIVGRSNIVGKPLAALLMQK 176 (287)
T ss_pred CCCCEEEEECCCccchHHHHHHHHhC
Confidence 67999999999999999999999987
No 497
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.65 E-value=0.58 Score=34.43 Aligned_cols=28 Identities=29% Similarity=0.506 Sum_probs=25.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
+.|++++|.|.+..+|+.++..|.+++.
T Consensus 157 l~GK~vvViGrS~iVGkPla~lL~~~~A 184 (288)
T PRK14171 157 LTGKNVVIIGRSNIVGKPLSALLLKENC 184 (288)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence 6899999999999999999999998864
No 498
>KOG0023|consensus
Probab=92.58 E-value=0.7 Score=34.57 Aligned_cols=45 Identities=13% Similarity=0.274 Sum_probs=31.7
Q ss_pred CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHH
Q psy11862 9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEF 59 (152)
Q Consensus 9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~ 59 (152)
.|+.+.|+|++| +|.--++.-...|. +|+.++++.. .-++.+..+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~---rV~vis~~~~--kkeea~~~L 225 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGM---RVTVISTSSK--KKEEAIKSL 225 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCc---EEEEEeCCch--hHHHHHHhc
Confidence 688999999888 88776666666786 7788887643 224444444
No 499
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=92.48 E-value=2.7 Score=30.29 Aligned_cols=70 Identities=19% Similarity=0.208 Sum_probs=44.5
Q ss_pred CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA 89 (152)
Q Consensus 10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 89 (152)
+++|+|.|||+= |+.++..|.+.|+. +++..-...+. . ......++.+-+.+.
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~---v~~Svat~~g~-~----------------------~~~~~~v~~G~l~~~ 54 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVD---IVLSLAGRTGG-P----------------------ADLPGPVRVGGFGGA 54 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCe---EEEEEccCCCC-c----------------------ccCCceEEECCCCCH
Confidence 568999999975 89999999988763 33333221111 0 013455566666443
Q ss_pred CCCCChhHHHHHhc--cccEEEecc
Q psy11862 90 NLGIKDSDLLMLQE--EVSVVFNGA 112 (152)
Q Consensus 90 ~~~~~~~~~~~~~~--~~d~vi~~a 112 (152)
+++..++. +++.||...
T Consensus 55 ------~~l~~~l~~~~i~~VIDAT 73 (248)
T PRK08057 55 ------EGLAAYLREEGIDLVIDAT 73 (248)
T ss_pred ------HHHHHHHHHCCCCEEEECC
Confidence 35777776 789999864
No 500
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.40 E-value=0.68 Score=33.98 Aligned_cols=28 Identities=29% Similarity=0.437 Sum_probs=25.8
Q ss_pred cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862 8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP 35 (152)
Q Consensus 8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~ 35 (152)
++|++++|.|.+..+|+.++..|.+++.
T Consensus 155 l~Gk~vvViGrS~iVGkPla~lL~~~~A 182 (282)
T PRK14182 155 PKGKRALVVGRSNIVGKPMAMMLLERHA 182 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence 6899999999999999999999998864
Done!