Query psy11864
Match_columns 193
No_of_seqs 236 out of 1405
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 20:55:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dem_A Complement factor MAsp- 100.0 2.6E-42 8.8E-47 260.1 16.5 181 1-187 39-235 (278)
2 1nt0_A MAsp2, mannose-binding 100.0 1.3E-42 4.6E-47 262.5 14.9 180 1-186 38-233 (286)
3 4aqb_A Mannan-binding lectin s 100.0 2.2E-36 7.4E-41 235.5 18.1 181 1-187 39-235 (361)
4 4gz9_A Neuropilin-1, A5 protei 100.0 2E-35 6.9E-40 241.7 12.2 152 1-190 49-203 (577)
5 3kq4_B Cubilin; protein-protei 100.0 8.8E-35 3E-39 232.7 14.7 142 1-188 272-415 (457)
6 3kq4_B Cubilin; protein-protei 100.0 8.5E-35 2.9E-39 232.8 14.4 147 1-190 155-302 (457)
7 2qqk_A Neuropilin-2; VEGF rece 100.0 7.1E-34 2.4E-38 233.2 14.2 152 1-189 46-200 (579)
8 1szb_A Mannose binding lectin- 99.9 1.2E-23 4.2E-28 147.2 12.1 114 1-118 42-169 (170)
9 1nzi_A Complement C1S componen 99.9 4.2E-23 1.4E-27 142.9 9.7 112 1-116 35-158 (159)
10 2wno_A Tumor necrosis factor-i 99.9 7.5E-22 2.6E-26 134.9 7.5 70 116-189 5-74 (149)
11 3poj_A Mannan-binding lectin s 99.8 1.6E-20 5.4E-25 123.1 4.6 70 116-187 2-73 (115)
12 1szb_A Mannose binding lectin- 99.8 5.3E-20 1.8E-24 128.6 7.0 66 118-187 3-69 (170)
13 1nzi_A Complement C1S componen 99.8 7.5E-20 2.6E-24 126.5 5.5 61 123-187 2-62 (159)
14 2wno_A Tumor necrosis factor-i 99.8 4.4E-19 1.5E-23 121.1 8.8 75 1-75 45-119 (149)
15 4aqb_A Mannan-binding lectin s 99.7 1.1E-18 3.8E-23 135.7 5.0 64 122-189 5-68 (361)
16 2qqo_A Neuropilin-2; VEGF rece 99.7 5.1E-18 1.7E-22 135.8 7.1 74 116-189 6-81 (460)
17 3dem_A Complement factor MAsp- 99.7 2.8E-18 9.5E-23 128.9 5.2 64 120-187 3-66 (278)
18 2qqm_A Neuropilin-1; VEGF rece 99.7 5.8E-18 2E-22 135.1 6.3 76 115-190 8-85 (450)
19 1spp_A Major seminal plasma gl 99.7 1.6E-17 5.4E-22 107.6 6.3 60 116-188 4-63 (109)
20 1nt0_A MAsp2, mannose-binding 99.7 6.8E-18 2.3E-22 127.2 5.3 63 121-187 3-65 (286)
21 1spp_B Major seminal plasma gl 99.7 4.2E-17 1.4E-21 106.7 6.3 60 116-188 7-66 (116)
22 1sfp_A ASFP; spermadhesin, bov 99.7 8.6E-17 2.9E-21 105.0 6.2 61 115-188 7-67 (114)
23 3poj_A Mannan-binding lectin s 99.7 3.2E-16 1.1E-20 102.4 7.8 70 1-74 43-115 (115)
24 1spp_B Major seminal plasma gl 99.6 2.1E-16 7.2E-21 103.4 5.9 69 1-75 42-110 (116)
25 2qqo_A Neuropilin-2; VEGF rece 99.6 1.3E-15 4.4E-20 121.9 11.3 75 1-75 46-126 (460)
26 1sfp_A ASFP; spermadhesin, bov 99.6 3.1E-16 1.1E-20 102.3 6.3 69 1-75 43-111 (114)
27 2qqm_A Neuropilin-1; VEGF rece 99.6 7.4E-16 2.5E-20 123.0 9.3 75 1-75 49-129 (450)
28 4gz9_A Neuropilin-1, A5 protei 99.6 1.1E-15 3.7E-20 125.3 10.2 80 1-80 167-252 (577)
29 1spp_A Major seminal plasma gl 99.6 3.8E-16 1.3E-20 101.0 5.3 68 1-75 39-106 (109)
30 2qqk_A Neuropilin-2; VEGF rece 99.6 7.8E-16 2.7E-20 126.4 6.5 70 116-190 4-76 (579)
31 1kli_L Factor VIIA; extrinsic 98.2 9.6E-07 3.3E-11 51.5 3.2 42 75-116 4-46 (69)
32 2jkh_L Factor X light chain; p 98.2 1.2E-06 4.1E-11 48.8 3.0 40 77-116 2-41 (55)
33 2wph_E Coagulation factor IXA 98.0 4.5E-06 1.5E-10 47.0 3.4 38 79-116 2-40 (59)
34 1kig_L Factor XA; glycoprotein 98.0 2.5E-06 8.6E-11 46.6 2.2 38 79-116 1-38 (51)
35 2bz6_L Blood coagulation facto 98.0 3.9E-06 1.3E-10 46.2 2.9 38 79-116 2-40 (53)
36 1apq_A Complement protease C1R 98.0 1E-05 3.5E-10 44.5 4.1 42 75-116 3-52 (53)
37 1x7a_L Coagulation factor IX, 97.4 0.00019 6.4E-09 48.2 4.3 68 65-136 74-142 (146)
38 3f1s_B Vitamin K-dependent pro 97.3 0.00015 5E-09 54.2 3.7 47 76-122 2-53 (283)
39 3v64_C Agrin; beta propeller, 97.0 0.00032 1.1E-08 53.9 2.4 39 77-116 2-40 (349)
40 1lmj_A Fibrillin 1; EGF, calci 96.8 0.00052 1.8E-08 41.6 2.0 50 65-114 30-85 (86)
41 1aut_L Activated protein C; se 96.7 0.0013 4.5E-08 42.0 3.6 52 65-116 40-94 (114)
42 3p5b_L Low density lipoprotein 96.7 0.0041 1.4E-07 48.6 6.7 38 77-115 1-38 (400)
43 1nfu_B Coagulation factor XA, 96.7 0.001 3.6E-08 46.7 3.0 52 65-116 68-121 (195)
44 2w2n_E LDL receptor, low-densi 96.7 0.0014 4.9E-08 41.4 3.4 55 59-115 13-67 (107)
45 2vh0_B Activated factor XA lig 96.6 0.0013 4.4E-08 43.4 3.0 52 65-116 68-121 (134)
46 1ijq_A LDL receptor, low-densi 96.4 0.0025 8.4E-08 48.1 4.0 41 75-115 266-315 (316)
47 3s94_A LRP-6, low-density lipo 96.4 0.0018 6.3E-08 53.6 3.4 42 75-116 577-618 (619)
48 4a0p_A LRP6, LRP-6, low-densit 96.4 0.0015 5E-08 54.3 2.7 46 75-120 264-310 (628)
49 2w2n_E LDL receptor, low-densi 96.4 0.00079 2.7E-08 42.6 0.7 49 65-114 55-106 (107)
50 3sov_A LRP-6, low-density lipo 96.3 0.0023 8E-08 48.4 3.3 42 76-117 267-310 (318)
51 3h5c_B Vitamin K-dependent pro 96.3 0.006 2E-07 46.1 5.6 57 65-121 31-93 (317)
52 1uzk_A Fibrillin-1; glycoprote 96.3 0.0023 8E-08 43.5 2.7 49 67-115 109-162 (162)
53 3v65_B Low-density lipoprotein 96.2 0.0011 3.7E-08 51.6 0.7 33 84-116 51-83 (386)
54 3v65_B Low-density lipoprotein 96.2 0.002 7E-08 50.0 2.2 32 84-115 11-42 (386)
55 1z6c_A Vitamin K-dependent pro 96.1 0.0063 2.1E-07 36.8 3.7 40 76-115 3-43 (87)
56 2w86_A Fibrillin-1, fibrillin1 95.9 0.0033 1.1E-07 42.0 1.9 50 65-114 93-146 (147)
57 2c4f_L Coagulation factor VII 95.8 0.0081 2.8E-07 39.9 3.7 52 65-116 73-129 (142)
58 2kl7_A Fibulin-4; secreted, ca 95.7 0.02 6.8E-07 33.2 4.5 37 75-111 2-41 (71)
59 3p5b_L Low density lipoprotein 95.6 0.0058 2E-07 47.8 2.7 51 65-116 26-79 (400)
60 2bou_A EGF-like module contain 95.2 0.014 4.7E-07 38.7 3.1 42 74-115 94-137 (143)
61 1dx5_I Thrombomodulin; serine 95.0 0.0069 2.4E-07 38.9 1.1 48 65-113 66-117 (118)
62 1emn_A Fibrillin; extracellula 94.9 0.024 8.1E-07 33.7 3.2 35 75-110 43-78 (82)
63 1lmj_A Fibrillin 1; EGF, calci 94.7 0.033 1.1E-06 33.4 3.6 41 75-115 2-44 (86)
64 1z6c_A Vitamin K-dependent pro 94.7 0.012 4.2E-07 35.5 1.6 50 65-116 30-85 (87)
65 3v64_C Agrin; beta propeller, 94.5 0.024 8.1E-07 43.4 3.1 41 75-116 303-343 (349)
66 1uzk_A Fibrillin-1; glycoprote 94.4 0.044 1.5E-06 37.0 4.0 41 75-116 2-43 (162)
67 1emn_A Fibrillin; extracellula 94.0 0.045 1.5E-06 32.5 3.0 38 75-115 4-42 (82)
68 3s94_A LRP-6, low-density lipo 93.9 0.037 1.3E-06 45.8 3.4 42 75-116 271-314 (619)
69 1gl4_A Nidogen-1, entactin; im 93.7 0.019 6.6E-07 42.5 1.2 40 75-116 4-45 (285)
70 3m0c_C LDL receptor, low-densi 93.5 0.12 4.2E-06 44.0 5.8 55 76-131 312-374 (791)
71 4a0p_A LRP6, LRP-6, low-densit 92.9 0.074 2.5E-06 44.1 3.6 40 76-115 579-619 (628)
72 1edm_B Factor IX; epidermal gr 92.7 0.1 3.5E-06 25.9 2.7 29 76-106 3-33 (39)
73 3m0c_C LDL receptor, low-densi 92.6 0.06 2.1E-06 45.9 2.7 51 65-116 338-391 (791)
74 1n7d_A LDL receptor, low-densi 92.2 0.075 2.6E-06 44.6 2.7 51 65-116 320-373 (699)
75 1n7d_A LDL receptor, low-densi 91.9 0.17 5.7E-06 42.5 4.5 39 76-115 294-332 (699)
76 2w86_A Fibrillin-1, fibrillin1 91.6 0.17 5.9E-06 33.4 3.6 39 75-115 3-42 (147)
77 1dx5_I Thrombomodulin; serine 89.9 0.31 1E-05 31.0 3.4 42 75-118 3-46 (118)
78 2k2s_B Micronemal protein 6; m 89.8 0.2 6.7E-06 28.0 2.1 30 75-106 10-43 (61)
79 2bou_A EGF-like module contain 88.9 0.61 2.1E-05 30.5 4.5 37 74-110 42-81 (143)
80 1x7a_L Coagulation factor IX, 88.1 1.2 4E-05 29.4 5.4 30 75-106 47-78 (146)
81 4d90_A EGF-like repeat and dis 86.4 0.54 1.8E-05 30.7 3.0 43 65-107 85-128 (143)
82 2vj3_A Neurogenic locus notch 85.4 0.97 3.3E-05 29.3 3.8 33 75-107 4-38 (135)
83 1egf_A Epidermal growth factor 84.9 1 3.5E-05 24.0 3.1 30 77-106 4-38 (53)
84 1z1y_A Ookinete surface protei 84.8 0.99 3.4E-05 31.0 3.8 45 65-109 30-86 (186)
85 3u7u_G Neuregulin 1; signaling 84.5 1.2 4.1E-05 24.1 3.3 32 76-107 8-44 (55)
86 1a3p_A Epidermal growth factor 83.3 1.9 6.4E-05 22.0 3.6 19 88-106 15-35 (45)
87 1yo8_A Thrombospondin-2; EGF, 82.8 1.1 3.9E-05 37.0 3.9 45 65-109 31-83 (634)
88 2vj3_A Neurogenic locus notch 81.2 1.9 6.5E-05 27.9 3.9 43 65-107 33-76 (135)
89 1zjk_A Mannan-binding lectin s 81.1 3.4 0.00012 32.0 5.9 45 64-108 2-52 (403)
90 1yo8_A Thrombospondin-2; EGF, 80.6 2 6.7E-05 35.7 4.5 39 75-115 101-145 (634)
91 1aut_L Activated protein C; se 77.1 1.8 6.1E-05 27.1 2.7 21 88-108 26-46 (114)
92 1z1y_A Ookinete surface protei 76.6 2.2 7.4E-05 29.2 3.2 32 77-111 140-174 (186)
93 1k36_A Epiregulin; EGF-like fo 75.0 2.2 7.4E-05 22.0 2.2 18 89-106 18-37 (46)
94 2c4f_L Coagulation factor VII 73.6 2.8 9.4E-05 27.4 3.0 30 75-106 46-77 (142)
95 1hae_A Heregulin-alpha; growth 70.5 2.9 9.9E-05 23.0 2.2 19 88-106 18-41 (63)
96 1nql_B Epidermal growth factor 69.0 3.6 0.00012 21.9 2.3 19 89-107 19-39 (53)
97 1nfu_B Coagulation factor XA, 66.7 1.2 4E-05 31.1 0.0 31 75-107 41-73 (195)
98 1g1s_A P-selectin; selectin, l 66.6 4.2 0.00014 26.9 2.8 20 88-107 131-150 (162)
99 3h5c_B Vitamin K-dependent pro 66.2 4 0.00014 30.4 2.8 31 76-106 5-35 (317)
100 1tpg_A T-plasminogen activator 65.3 5.2 0.00018 23.8 2.7 30 75-106 47-80 (91)
101 2ehf_A CUB and sushi domain-co 49.8 13 0.00044 20.8 2.5 13 97-109 36-48 (73)
102 3ca7_A Protein spitz; argos, E 44.3 11 0.00036 19.8 1.4 14 94-107 30-43 (52)
103 1q4g_A Prostaglandin G/H synth 39.7 22 0.00076 29.0 3.3 32 77-108 3-36 (553)
104 3ltf_D Protein spitz; receptor 32.3 20 0.00069 19.3 1.4 15 93-107 29-43 (58)
105 3nt1_A Prostaglandin-endoperox 31.6 35 0.0012 28.1 3.2 31 77-107 2-34 (587)
106 2vj2_A Jagged-1; signalling, p 29.9 24 0.00083 23.5 1.7 12 95-106 112-123 (169)
107 2ygo_A WIF-1, WNT inhibitory f 28.6 26 0.00088 24.2 1.6 22 85-106 150-174 (188)
108 3cfw_A L-selectin; EGF, cell a 25.9 45 0.0015 21.7 2.5 21 87-107 130-150 (164)
109 1g1t_A E-selectin; EGF, adhesi 25.0 43 0.0015 21.6 2.3 19 88-106 131-149 (157)
110 1iox_A Betacellulin; EGF-like 22.1 55 0.0019 16.9 1.9 16 92-107 25-40 (50)
111 3e50_C Protransforming growth 20.1 53 0.0018 17.1 1.5 15 93-107 26-40 (50)
112 3sbt_A PRE-mRNA-splicing facto 20.1 99 0.0034 22.1 3.3 33 127-161 1-33 (260)
No 1
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=260.13 Aligned_cols=181 Identities=34% Similarity=0.753 Sum_probs=161.0
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCC--------CceEecCCEEEEEEecCCCCCC--CCceE
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLP--------PDIKSSGTKLMIKFVSDGSVQK--PGFSA 70 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p--------~~i~s~~~~l~v~f~sd~~~~~--~GF~~ 70 (193)
|+|+|.+|+||.+..|.+|||+|+||. ..++++||...| ..++|+++.|+|+|++|.+... .||+|
T Consensus 39 I~L~F~~f~le~~~~C~~D~l~v~dg~----~~~~~~CG~~~~~~~~~~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~ 114 (278)
T 3dem_A 39 IKLYFMHFNLESSYLCEYDYVKVETED----QVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDA 114 (278)
T ss_dssp EEEEEEEEECCCCGGGCSSEEEEECSS----CEEEEECSBSSSSSSCCCTTCCEECSSSEEEEEEEECSCCCSCCCEEEE
T ss_pred EEEEEEEEEeCCCCCCCCcEEEEecCC----cccceEcCCcCCCcccCCCCccEEecCCeEEEEEecCcccccccceeEE
Confidence 689999999999889999999999974 468999998753 6899999999999999988764 79999
Q ss_pred eccc-ccccccCCC---CCccceeecCCCceEEeccCCeEEccCCcccccCCCCC-cccCCCCccCCCCCCCCCCCCceE
Q psy11864 71 IFMK-EFDECALED---HGCEHTCKNILGGYECSCKIGYELHSDGKICLDACGGI-LNTPNGTLTSPSFPDLYIKNKTCI 145 (193)
Q Consensus 71 ~~~~-~~~~c~~~~---~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~C~~~-~~~~~g~i~Sp~~p~~y~~~~~C~ 145 (193)
.|.+ ..++|.... ..|.+.|.+..+++.|.|.+||.++.+.+.|...|++. ++..+|.|+||+||.+||++.+|.
T Consensus 115 ~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~ 194 (278)
T 3dem_A 115 HYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECL 194 (278)
T ss_dssp EEEEEECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEECCCCCCCBCSSEEEEESTTTTSCCCSSCEEE
T ss_pred EEEEeccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCcccCCCceecCCccceeCCCCCCCCCCcCeEE
Confidence 9987 567787654 37999999999999999999999999999999999985 588899999999999999999999
Q ss_pred EEEEcCCCCeEEEEEee-EEeecCCCCCCCCCCcEEEEEeCCC
Q psy11864 146 WEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIG 187 (193)
Q Consensus 146 w~I~~~~~~~i~l~F~~-f~l~~~~~~~~~C~~D~l~I~dg~~ 187 (193)
|.|+++++++|.|+|.+ |+||... ...|.+|||+||||..
T Consensus 195 w~i~~~~g~~i~l~f~~~f~le~~~--~~~C~~D~l~i~dg~~ 235 (278)
T 3dem_A 195 YTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIKVGPK 235 (278)
T ss_dssp EEEECCTTCCEEEEECSCCBBCCCS--SSSSSSCEEEEEETTE
T ss_pred EEEEeCCCcEEEEEEccccccccCC--CCCCCCCEEEEecCCc
Confidence 99999999999999997 9999642 2479999999999963
No 2
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=100.00 E-value=1.3e-42 Score=262.47 Aligned_cols=180 Identities=35% Similarity=0.756 Sum_probs=153.9
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCcc------CC--CceEecCCEEEEEEecCCCCCC--CCceE
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYK------LP--PDIKSSGTKLMIKFVSDGSVQK--PGFSA 70 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~------~p--~~i~s~~~~l~v~f~sd~~~~~--~GF~~ 70 (193)
|+|+|.+|+||.+..|.+|||+|+||. ..++++||.. .| ..++|+++.|+|+|++|..... .||+|
T Consensus 38 I~L~F~~f~le~~~~C~~D~l~I~dg~----~~~~~~CG~~~~~~~~~P~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a 113 (286)
T 1nt0_A 38 LRLYFTHFNLELSYRCEYDFVKLTSGT----KVLATLCGQESTDTERAPGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEA 113 (286)
T ss_dssp EEEEEEEEECCCCGGGCSSEEEEEETT----EEEEEECSSSCCSSCBCCTTCEEECSSSEEEEEEECCC----CCCEEEE
T ss_pred EEEEEEEEEecCCCCCCCcEEEEECCC----eEeceECCCcCCCcccCCCCceEEeCCCEEEEEEEeCCcCCcCcccEEE
Confidence 689999999999888999999999984 5789999986 57 7899999999999999998775 99999
Q ss_pred eccc-ccccccCCC---CCccceeecCCCceEEeccCCeEEccCCcccccCCCCC-cccCCCCccCCCCCCCCCCCCceE
Q psy11864 71 IFMK-EFDECALED---HGCEHTCKNILGGYECSCKIGYELHSDGKICLDACGGI-LNTPNGTLTSPSFPDLYIKNKTCI 145 (193)
Q Consensus 71 ~~~~-~~~~c~~~~---~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~C~~~-~~~~~g~i~Sp~~p~~y~~~~~C~ 145 (193)
.|.+ ..++|..+. ..|.+.|.+..+++.|.|.+||.|..+++.|...|++. +...+|.|+||+||..||++.+|.
T Consensus 114 ~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~~~Cg~~~~~~~~G~i~SP~yP~~Yp~~~~C~ 193 (286)
T 1nt0_A 114 FYAAEDVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCSALCSGQVFTGRSGFLSSPEYPQPYPKLSSCA 193 (286)
T ss_dssp EEEEEECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEEECCEEEEECSSSEEEECTTTTSCCCSSCEEE
T ss_pred EEEeccCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCccccccCceecCCceEEeCCCCCCCCCCCCEEE
Confidence 9987 457787543 35899999999999999999999999999999999997 788999999999999999999999
Q ss_pred EEEEcCCCCeEEEEEe-eEEeecCCCCCCCCCCcEEEEEeCC
Q psy11864 146 WEIVAPPQYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKI 186 (193)
Q Consensus 146 w~I~~~~~~~i~l~F~-~f~l~~~~~~~~~C~~D~l~I~dg~ 186 (193)
|.|+++++++|.|+|. .|+||... ...|.+|+|+||||.
T Consensus 194 w~I~~~~g~~I~l~f~~~f~le~~~--~~~C~~D~l~i~dg~ 233 (286)
T 1nt0_A 194 YNIRLEEGFSITLDFVESFDVEMHP--EAQCPYDSLKIQTDK 233 (286)
T ss_dssp EEEECCSSCEEEEEECSCCBBCCC------C--CEEEEECSS
T ss_pred EEEECCCceEEEEEEeceEEeccCC--CCCCCCcEEEEEeCC
Confidence 9999999999999996 79999741 138999999999995
No 3
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=235.52 Aligned_cols=181 Identities=34% Similarity=0.743 Sum_probs=153.9
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCC--------CceEecCCEEEEEEecCCCCCC--CCceE
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLP--------PDIKSSGTKLMIKFVSDGSVQK--PGFSA 70 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p--------~~i~s~~~~l~v~f~sd~~~~~--~GF~~ 70 (193)
|+|+|.+|+||.+..|.+|||+|++|. ..++++||...| ..++|++|.|+|+|+||.+... .||+|
T Consensus 39 I~l~F~~f~lE~~~~C~~D~l~i~dg~----~~~~~~cG~~~~~~~~~~~~~~~~S~~n~l~v~F~SD~s~~~~~~GF~a 114 (361)
T 4aqb_A 39 IKLYFMHFNLESSYLCEYDYVKVETED----QVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDA 114 (361)
T ss_dssp EEEEEEEEECCCCGGGCSSEEEEECSS----CEEEEECSBSSSSSSCCCTTCCEECSSSEEEEEEEECSCCCSCCCEEEE
T ss_pred EEEEEeEEEecCCCCCCceEEEEccCC----cccceeeccccCCCccCCCccceeccCCEeEEEEEeCCccccccccccc
Confidence 689999999999999999999999974 345666765432 3599999999999999988776 49999
Q ss_pred eccc-ccccccCC---CCCccceeecCCCceEEeccCCeEEccCCcccccC-CCCCcccCCCCccCCCCCCCCCCCCceE
Q psy11864 71 IFMK-EFDECALE---DHGCEHTCKNILGGYECSCKIGYELHSDGKICLDA-CGGILNTPNGTLTSPSFPDLYIKNKTCI 145 (193)
Q Consensus 71 ~~~~-~~~~c~~~---~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~-C~~~~~~~~g~i~Sp~~p~~y~~~~~C~ 145 (193)
+|.+ ..++|... ...|.+.|.+..+++.|.|..|+.+..+...|... |++.++..+|.|+||+||.+||++.+|.
T Consensus 115 ~y~~~~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~~~~c~~~~~~~~G~i~SP~yP~~Yp~~~~C~ 194 (361)
T 4aqb_A 115 HYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECL 194 (361)
T ss_dssp EEEEEECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSSCEECCCCCCCBCSSEEEEESTTTTSCCCSSCEEE
T ss_pred ceeeccccccccccccCCCCCccCCccCCCceeccCCCeEEeccccccccccccceEeCCCcEEecCCCCCCCCCCceee
Confidence 9987 34566543 45788999999999999999999999998888765 5566788999999999999999999999
Q ss_pred EEEEcCCCCeEEEEEee-EEeecCCCCCCCCCCcEEEEEeCCC
Q psy11864 146 WEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIG 187 (193)
Q Consensus 146 w~I~~~~~~~i~l~F~~-f~l~~~~~~~~~C~~D~l~I~dg~~ 187 (193)
|.|.++++++|.|+|.+ |+++... ...|.+|||+|+||..
T Consensus 195 w~i~~~~g~~i~l~f~~~~~~e~~~--~~~C~~D~l~i~dg~~ 235 (361)
T 4aqb_A 195 YTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIKVGPK 235 (361)
T ss_dssp EEEECCTTCEEEEEECSCCBBCCCS--SSSSSSSEEEEEETTE
T ss_pred EEeeeccCcEEEEEEeecccccCCc--cCccCCCeEEEeeCCe
Confidence 99999999999999987 6666532 2479999999999964
No 4
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=100.00 E-value=2e-35 Score=241.71 Aligned_cols=152 Identities=33% Similarity=0.622 Sum_probs=134.0
Q ss_pred CEEEee-EEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEecccccccc
Q psy11864 1 VALKFQ-SFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKEFDEC 79 (193)
Q Consensus 1 I~l~F~-~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~~~~c 79 (193)
|+|+|. .|+||. .+|.+|||+|+||....++++++|||...|..|+|++|.|+|+|+||.+..++||.+.|++...
T Consensus 49 I~L~F~~~f~le~-~~C~~Dyl~I~dG~~~~~~~lg~~CG~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~~~~-- 125 (577)
T 4gz9_A 49 IMINFNPHFDLED-RDCKYDYVEVIDGENEGGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKR-- 125 (577)
T ss_dssp EEEEECSCCBCCC-GGGTSSEEEEEESSSTTSEEEEEECSSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEECCC--
T ss_pred EEEEEEeeeeecC-CCCCccEEEEEeCCCCCCcEEEEecCCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEEeec--
Confidence 679996 799996 4699999999999988889999999999999999999999999999999999999999976311
Q ss_pred cCCCCCccceeecCCCceEEeccCCeEEccCCcccccCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEE
Q psy11864 80 ALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLDACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLN 159 (193)
Q Consensus 80 ~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~ 159 (193)
...|++.++..+|.|+||+||..||++++|.|.|.+|++++|.|+
T Consensus 126 -----------------------------------~~~C~~~~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~g~~I~L~ 170 (577)
T 4gz9_A 126 -----------------------------------GPECSQNYTAPTGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILE 170 (577)
T ss_dssp -----------------------------------CCEEEEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEE
T ss_pred -----------------------------------CcccceeecCCCccccCCCCCCCCCCCceEEEEEEECCCCEEEEE
Confidence 235777888889999999999999999999999999999999999
Q ss_pred EeeEEeecCCC--CCCCCCCcEEEEEeCCCCcc
Q psy11864 160 FTHFDIEGNNL--FQSSCEYDNLTVFSKIGDSF 190 (193)
Q Consensus 160 F~~f~l~~~~~--~~~~C~~D~l~I~dg~~~~~ 190 (193)
|.+|+||.... ....|.+|||+||||.+...
T Consensus 171 F~~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~~ 203 (577)
T 4gz9_A 171 FESFDLEQDSNPPGGMFCRYDRLEIWDGFPEVG 203 (577)
T ss_dssp EEEEECCCCCSCSTTCCCCSSEEEEESSSTTTS
T ss_pred EEEEEeeecCCCCCCCccCccEEEEEcCCCCCC
Confidence 99999997541 11359999999999987654
No 5
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=232.74 Aligned_cols=142 Identities=32% Similarity=0.675 Sum_probs=130.7
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEeccccccccc
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKEFDECA 80 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~~~~c~ 80 (193)
|+|+|.+|+||.+..|.+|+|+||||....+++++++||...|..++|+++.|+|+|++|.....+||+|.|.+
T Consensus 272 i~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~l~~~CG~~~p~~i~S~~n~l~v~f~sd~~~~~~GF~a~y~~------ 345 (457)
T 3kq4_B 272 FELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQ------ 345 (457)
T ss_dssp EEEEEEECCCCCCTTCCSSEEEEEESSSTTSEEEEEECSSCCCCCEECSSSCEEEEEECCSSCCCCCCEEEEEE------
T ss_pred EEEEEEeeeecCCCCcCCCEEEEEeCCCCCchhhhhhcCCcCCCCEEecCCEEEEEEEeCCcccCCeEEEEEEe------
Confidence 68999999999988999999999999988888999999999999999999999999999999999999999964
Q ss_pred CCCCCccceeecCCCceEEeccCCeEEccCCcccccCCCCCc--ccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEE
Q psy11864 81 LEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLDACGGIL--NTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISL 158 (193)
Q Consensus 81 ~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~C~~~~--~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l 158 (193)
.|++.+ ....|.|.||+||..||++.+|.|+|+++++++|+|
T Consensus 346 ------------------------------------~C~~~~~~~~~~G~i~Sp~yP~~Yp~~~~C~w~i~~~~g~~i~l 389 (457)
T 3kq4_B 346 ------------------------------------TCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNY 389 (457)
T ss_dssp ------------------------------------CCTTEEECSCSSEEEECTTTTSCCCSSCEEEEEEECSTTCCCEE
T ss_pred ------------------------------------ecCCcccccceeeEEecCCCCccCCCCCceEEEEEcCCCCEEEE
Confidence 466655 345699999999999999999999999999999999
Q ss_pred EEeeEEeecCCCCCCCCCCcEEEEEeCCCC
Q psy11864 159 NFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 188 (193)
Q Consensus 159 ~F~~f~l~~~~~~~~~C~~D~l~I~dg~~~ 188 (193)
+|..|+||... .|.+|||+||||.+.
T Consensus 390 ~f~~f~le~~~----~C~~D~l~i~dg~~~ 415 (457)
T 3kq4_B 390 TFLAFDLEHHI----NCSTDYLELYDGPRQ 415 (457)
T ss_dssp EEEEEECCCCT----TTTSSEEEEEETTEE
T ss_pred EEeEEEEccCC----CCCceEEEEEeCCcc
Confidence 99999999865 899999999999753
No 6
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=100.00 E-value=8.5e-35 Score=232.83 Aligned_cols=147 Identities=34% Similarity=0.643 Sum_probs=136.3
Q ss_pred CEEEeeEEeecCCC-CCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEecccccccc
Q psy11864 1 VALKFQSFEIENHD-QCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKEFDEC 79 (193)
Q Consensus 1 I~l~F~~f~le~~~-~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~~~~c 79 (193)
|+|+|.+|+||... .|.+|+|+|+||....+++++++||...|..++|++|.|+|+|++|.....+||++.|.+.
T Consensus 155 i~l~f~~f~le~~~~~C~~D~l~i~dg~~~~s~~~~~~cG~~~p~~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~---- 230 (457)
T 3kq4_B 155 IAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGS---- 230 (457)
T ss_dssp CEEEEEEEECCCCBTTBCSSEEEEESSSSTTSCEEEEECSSSCCCCEECSSSCEEEEEECCSSCCCCEEEEEEECC----
T ss_pred EEEEEEEEEeecCCCCcccceEEEecCCCCCcceeeeecCCCCCCCeEEcCCEEEEEEEeCCCCCcCCEEEEeccc----
Confidence 78999999999865 8999999999998888899999999999999999999999999999999999999999752
Q ss_pred cCCCCCccceeecCCCceEEeccCCeEEccCCcccccCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEE
Q psy11864 80 ALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLDACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLN 159 (193)
Q Consensus 80 ~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~ 159 (193)
...|++.+...+|.|+||+||..||++.+|+|.|.++++++|.|+
T Consensus 231 -----------------------------------~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~~~~i~l~ 275 (457)
T 3kq4_B 231 -----------------------------------STGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELE 275 (457)
T ss_dssp -----------------------------------CCCCEECCCSSEEEEECTTTTSCCCSSCEEEEEECCSTTCCEEEE
T ss_pred -----------------------------------cCCCCCeEccCcceeccCCCCCCCCCCCEEEEEEEeCCCCEEEEE
Confidence 257888888889999999999999999999999999999999999
Q ss_pred EeeEEeecCCCCCCCCCCcEEEEEeCCCCcc
Q psy11864 160 FTHFDIEGNNLFQSSCEYDNLTVFSKIGDSF 190 (193)
Q Consensus 160 F~~f~l~~~~~~~~~C~~D~l~I~dg~~~~~ 190 (193)
|.+|+||... .|.+|+|+||||.+...
T Consensus 276 f~~f~le~~~----~C~~D~l~i~dg~~~~~ 302 (457)
T 3kq4_B 276 FKDFHLEHHP----NCTLDYLAVYDGPSSNS 302 (457)
T ss_dssp EEECCCCCCT----TCCSSEEEEEESSSTTS
T ss_pred EEeeeecCCC----CcCCCEEEEEeCCCCCc
Confidence 9999999876 89999999999987654
No 7
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=100.00 E-value=7.1e-34 Score=233.23 Aligned_cols=152 Identities=39% Similarity=0.733 Sum_probs=125.1
Q ss_pred CEEEee-EEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEecccccccc
Q psy11864 1 VALKFQ-SFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKEFDEC 79 (193)
Q Consensus 1 I~l~F~-~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~~~~c 79 (193)
|+|.|. +|+||. ..|.+|||+|+||....++++++|||...|..|+|+++.|+|+|+||.+...+||+++|.....
T Consensus 46 I~l~F~~~f~le~-~~C~~D~l~i~dg~~~~~~~l~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~-- 122 (579)
T 2qqk_A 46 IVLNFNPHFEIEK-HDCKYDFIEIRDGDSESADLLGKHCGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEIFKT-- 122 (579)
T ss_dssp EEEEECSCCBCCC-TTSSSSEEEEEESSSTTSEEEEEECTTSCCCCEECSSSEEEEEEECC---CCCBCEEEEEEECC--
T ss_pred EEEEEeccccccc-CCCCeeEEEEEeCCCCCcceeeeECCCCCCCCEEecCCEEEEEEEECCCCCCCceEEEEEEccc--
Confidence 679999 899996 5799999999999887788999999999999999999999999999999999999999975210
Q ss_pred cCCCCCccceeecCCCceEEeccCCeEEccCCcccccCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEE
Q psy11864 80 ALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLDACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLN 159 (193)
Q Consensus 80 ~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~ 159 (193)
....|++.+...+|.|+||+||..||++.+|.|.|.++++++|.|.
T Consensus 123 ----------------------------------~~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~ 168 (579)
T 2qqk_A 123 ----------------------------------GSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQ 168 (579)
T ss_dssp ----------------------------------CCCCCCCEECCSEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEE
T ss_pred ----------------------------------ccccccceeccCCceecCCCCcccCCCCCeEEEEEEcCCCCEEEEE
Confidence 1245889898899999999999999999999999999999999999
Q ss_pred EeeEEeecCCC--CCCCCCCcEEEEEeCCCCc
Q psy11864 160 FTHFDIEGNNL--FQSSCEYDNLTVFSKIGDS 189 (193)
Q Consensus 160 F~~f~l~~~~~--~~~~C~~D~l~I~dg~~~~ 189 (193)
|..|+||.... ....|.+|||+||||.+..
T Consensus 169 F~~f~le~~~~~~~~~~C~~D~l~I~dg~~~~ 200 (579)
T 2qqk_A 169 FLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHV 200 (579)
T ss_dssp EEEEEC-------------CCEEEEESSSTTT
T ss_pred EEEEEeecccccccCCCCCCEEEEEEeCCCCC
Confidence 99999997410 1138999999999998654
No 8
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.91 E-value=1.2e-23 Score=147.15 Aligned_cols=114 Identities=38% Similarity=0.825 Sum_probs=101.4
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCcc------CC--CceEecCCEEEEEEecCCCCCC--CCceE
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYK------LP--PDIKSSGTKLMIKFVSDGSVQK--PGFSA 70 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~------~p--~~i~s~~~~l~v~f~sd~~~~~--~GF~~ 70 (193)
|+|+|.+|+||.+..|.+|||+||||. ..+++|||.. .| ..++|+++.|+|+|+||.+... .||.+
T Consensus 42 I~l~f~~f~le~~~~C~~D~l~i~dg~----~~~~~~CG~~~~~~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~ 117 (170)
T 1szb_A 42 LRLYFTHFDLELSHLCEYDFVKLSSGA----KVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEA 117 (170)
T ss_dssp EEEEEEEEECCCCTTSCSSEEEEESSS----SEEEEECSBTTTTCSSSCTTCCEECSSSEEEEEEECCSCCSSCCCEEEE
T ss_pred EEEEEEEEEccCCCCCCCCEEEEEeCC----ccccccCCCCCCccccCCCCceEEeeCCeEEEEEeccccccCcCcCcee
Confidence 689999999999889999999999983 5789999987 47 7899999999999999998876 99999
Q ss_pred eccc-ccccccCCCCC---ccceeecCCCceEEeccCCeEEccCCcccccCC
Q psy11864 71 IFMK-EFDECALEDHG---CEHTCKNILGGYECSCKIGYELHSDGKICLDAC 118 (193)
Q Consensus 71 ~~~~-~~~~c~~~~~~---c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~~C 118 (193)
.|.+ ..++|...+.. |.+.|.+..+++.|.|.+||.+..++.+|.+.|
T Consensus 118 ~~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~~ 169 (170)
T 1szb_A 118 FYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQS 169 (170)
T ss_dssp EEEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC-
T ss_pred eeeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcccccc
Confidence 9976 57899877654 999999999999999999999999999987654
No 9
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.89 E-value=4.2e-23 Score=142.94 Aligned_cols=112 Identities=37% Similarity=0.679 Sum_probs=96.7
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCC--------CceEecCCEEEEEEecCCCCCC--CCceE
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLP--------PDIKSSGTKLMIKFVSDGSVQK--PGFSA 70 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p--------~~i~s~~~~l~v~f~sd~~~~~--~GF~~ 70 (193)
|+|+|.+|+||.+..|.+|||+|+||. ..++++||...| ..++|+++.|+|+|+||..... +||.+
T Consensus 35 I~l~f~~f~le~~~~C~~D~l~i~dg~----~~~~~~CG~~~~~~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~ 110 (159)
T 1nzi_A 35 IHLYFTHLDIELSENCAYDSVQIISGD----TEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAA 110 (159)
T ss_dssp EEEEEEEEECCCCGGGCSSEEEEEC-------CCEEECSEECCCCSSCCCSEEEEESSSEEEEEEEECSCCTTCCCEEEE
T ss_pred EEEEEeEEEecCCCCCCCCEEEEEeCC----chhcccCCCCCCCcccCCcceeEEecCCeEEEEEEecCccCccccccee
Confidence 689999999999888999999999984 478999998764 3699999999999999988875 99999
Q ss_pred eccc-ccccccCC-CCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 71 IFMK-EFDECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 71 ~~~~-~~~~c~~~-~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
.|.. ..++|... ...|.+.|.+..+++.|.|.+||.|..++++|.+
T Consensus 111 ~y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 111 YYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EEEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred eeecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 9986 56899875 4678899999999999999999999999988864
No 10
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=99.86 E-value=7.5e-22 Score=134.91 Aligned_cols=70 Identities=33% Similarity=0.747 Sum_probs=65.7
Q ss_pred cCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCCCc
Q psy11864 116 DACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 189 (193)
Q Consensus 116 ~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~~~ 189 (193)
..|++.+...+|.|+||+||..||++.+|.|.|+++++++|+|+|.+|+||... .|.+|+|+||||.+..
T Consensus 5 ~~Cgg~l~~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~----~C~~D~l~I~dg~~~~ 74 (149)
T 2wno_A 5 KECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDP----GCLADYVEIYDSYDDV 74 (149)
T ss_dssp SCCCEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCT----TCCSSEEEEESSSSSS
T ss_pred CCCCCEEECCceEEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCC----CCCCCEEEEecCCCCC
Confidence 579999988899999999999999999999999999999999999999999865 8999999999998754
No 11
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=99.81 E-value=1.6e-20 Score=123.05 Aligned_cols=70 Identities=31% Similarity=0.644 Sum_probs=61.3
Q ss_pred cCCCCCc-ccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEe-eEEeecCCCCCCCCCCcEEEEEeCCC
Q psy11864 116 DACGGIL-NTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIG 187 (193)
Q Consensus 116 ~~C~~~~-~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~-~f~l~~~~~~~~~C~~D~l~I~dg~~ 187 (193)
..||+.+ ...+|.|+||+||..||++.+|.|.|.++++++|+|+|. .|+||... ...|.+|+|+|+||..
T Consensus 2 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~--~~~C~~D~l~i~dg~~ 73 (115)
T 3poj_A 2 VECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHP--EVPCPYDYIKIKAGSK 73 (115)
T ss_dssp -CEEEEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBCCCS--SSSSCSCEEEEEETTE
T ss_pred eECCCceEcCCCEEEcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecccCC--CCCCCCeEEEEEcCCc
Confidence 3677774 788999999999999999999999999999999999999 59999742 2489999999999953
No 12
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.80 E-value=5.3e-20 Score=128.61 Aligned_cols=66 Identities=39% Similarity=0.709 Sum_probs=60.6
Q ss_pred CCC-CcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCC
Q psy11864 118 CGG-ILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIG 187 (193)
Q Consensus 118 C~~-~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~ 187 (193)
||+ .++..+|.|+||+||..||++.+|.|.|+++++++|+|+|.+|+||... .|.+|||+||||..
T Consensus 3 ~G~~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~----~C~~D~l~i~dg~~ 69 (170)
T 1szb_A 3 LGPKWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSH----LCEYDFVKLSSGAK 69 (170)
T ss_dssp CCCCCCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCT----TSCSSEEEEESSSS
T ss_pred CccceEcCCCeEEECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEccCCC----CCCCCEEEEEeCCc
Confidence 444 4578899999999999999999999999999999999999999999876 89999999999864
No 13
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.79 E-value=7.5e-20 Score=126.52 Aligned_cols=61 Identities=36% Similarity=0.668 Sum_probs=55.0
Q ss_pred ccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCC
Q psy11864 123 NTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIG 187 (193)
Q Consensus 123 ~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~ 187 (193)
+..+|.|+||+||..||++.+|.|.|+++++++|+|+|.+|+||... .|.+|+|+||||..
T Consensus 2 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~----~C~~D~l~i~dg~~ 62 (159)
T 1nzi_A 2 PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSE----NCAYDSVQIISGDT 62 (159)
T ss_dssp CCSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEEC---
T ss_pred CCCCEEEECCCCccCCCCCCCEEEEEEeCCCCEEEEEEeEEEecCCC----CCCCCEEEEEeCCc
Confidence 45689999999999999999999999999999999999999999865 89999999999964
No 14
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=99.79 E-value=4.4e-19 Score=121.13 Aligned_cols=75 Identities=39% Similarity=0.715 Sum_probs=70.4
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEecccc
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKE 75 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~ 75 (193)
|+|+|.+|+||.+..|.+|||+||||....++++++|||...|..++|+++.|+|+|++|.....+||+|.|.+.
T Consensus 45 I~L~F~~f~le~~~~C~~D~l~I~dg~~~~~~~~~~~CG~~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~ 119 (149)
T 2wno_A 45 IHLSFLDFDLEDDPGCLADYVEIYDSYDDVHGFVGRYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAM 119 (149)
T ss_dssp EEEEEEEEECCCCTTCCSSEEEEESSSSSSSSEEEEECSSSCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEEE
T ss_pred EEEEEEEEEecCCCCCCCCEEEEecCCCCCcceeeeEcCCCCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEEE
Confidence 689999999999889999999999998777788999999999999999999999999999999999999999873
No 15
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.74 E-value=1.1e-18 Score=135.67 Aligned_cols=64 Identities=36% Similarity=0.690 Sum_probs=59.8
Q ss_pred cccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCCCc
Q psy11864 122 LNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDS 189 (193)
Q Consensus 122 ~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~~~ 189 (193)
|++..|.|+|||||++||++++|.|.|+||+|++|+|+|.+|+||... .|.+|||+|+||....
T Consensus 5 lt~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~l~F~~f~lE~~~----~C~~D~l~i~dg~~~~ 68 (361)
T 4aqb_A 5 LNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSY----LCEYDYVKVETEDQVL 68 (361)
T ss_dssp EESSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEECSSCEE
T ss_pred EeCCeEEEeCCCCCCCCCCCCeEEEEEEECCCCEEEEEEeEEEecCCC----CCCceEEEEccCCccc
Confidence 577899999999999999999999999999999999999999999876 8999999999997654
No 16
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=99.72 E-value=5.1e-18 Score=135.76 Aligned_cols=74 Identities=36% Similarity=0.744 Sum_probs=63.1
Q ss_pred cCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCC--CCCCCCCcEEEEEeCCCCc
Q psy11864 116 DACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL--FQSSCEYDNLTVFSKIGDS 189 (193)
Q Consensus 116 ~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~--~~~~C~~D~l~I~dg~~~~ 189 (193)
..|++.+....|.|+||+||+.||++.+|.|.|.+|++++|.|.|..|+||.... ....|.+|||+||||.+..
T Consensus 6 ~~Cg~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~ 81 (460)
T 2qqo_A 6 EDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHV 81 (460)
T ss_dssp -CCCEEECSSEEEEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEEESSSTTT
T ss_pred CCCCCEEeCCceEEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCC
Confidence 4699999888999999999999999999999999999999999999999997410 0137999999999998654
No 17
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=99.72 E-value=2.8e-18 Score=128.91 Aligned_cols=64 Identities=36% Similarity=0.685 Sum_probs=57.4
Q ss_pred CCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCC
Q psy11864 120 GILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIG 187 (193)
Q Consensus 120 ~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~ 187 (193)
+.++..+|.|+||+||+.||++.+|+|.|+++++++|+|+|..|+||... .|.+|+|+||||..
T Consensus 3 ~~lt~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~----~C~~D~l~v~dg~~ 66 (278)
T 3dem_A 3 VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSY----LCEYDYVKVETEDQ 66 (278)
T ss_dssp ----CCEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEECSSC
T ss_pred ceeccCCceEeCCCCCCCCcCCCcEEEEEEECCCCEEEEEEEEEEeCCCC----CCCCcEEEEecCCc
Confidence 45678899999999999999999999999999999999999999999876 89999999999964
No 18
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=99.72 E-value=5.8e-18 Score=135.12 Aligned_cols=76 Identities=30% Similarity=0.573 Sum_probs=65.4
Q ss_pred ccCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCC--CCCCCCcEEEEEeCCCCcc
Q psy11864 115 LDACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLF--QSSCEYDNLTVFSKIGDSF 190 (193)
Q Consensus 115 ~~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~--~~~C~~D~l~I~dg~~~~~ 190 (193)
...|++.+....|.|+||+||+.||++.+|.|.|.+|++++|.|.|.+|+||..... ...|.+|||+||||.+...
T Consensus 8 ~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~ 85 (450)
T 2qqm_A 8 GPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVG 85 (450)
T ss_dssp -CTTCEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTS
T ss_pred CCCCCCeEeCCcEEEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCC
Confidence 467999998889999999999999999999999999999999999999999974210 1279999999999986543
No 19
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.71 E-value=1.6e-17 Score=107.57 Aligned_cols=60 Identities=22% Similarity=0.582 Sum_probs=55.4
Q ss_pred cCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCCC
Q psy11864 116 DACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 188 (193)
Q Consensus 116 ~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~~ 188 (193)
..||+.+...+|.|+|| ||++.+|.|.|++|++++|.|+|.+|+| .|.+|||+||||...
T Consensus 4 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~I~dg~~~ 63 (109)
T 1spp_A 4 HACGGRLTDDYGTIFTY-----KGPKTECVWTLQVDPKYKLLVSIPTLNL--------TCGKEYVEVLEGAPG 63 (109)
T ss_dssp CSSCEEEECSEEEEECC-----CSSCSEEEEEEECCTTSEEEEEEEEEEC--------CTTTEEEEEESSSTT
T ss_pred cCCCCEEeCCcEEEeCC-----CCCCCcEEEEEEcCCCCEEEEEEeeeec--------cCCCCEEEEEeCCCC
Confidence 57999998889999998 8899999999999999999999999997 588899999999864
No 20
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=99.71 E-value=6.8e-18 Score=127.24 Aligned_cols=63 Identities=37% Similarity=0.691 Sum_probs=57.6
Q ss_pred CcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCC
Q psy11864 121 ILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIG 187 (193)
Q Consensus 121 ~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~ 187 (193)
.++..+|.|+||+||..||++.+|.|.|++|++++|+|+|..|+||... .|.+|||+||||..
T Consensus 3 ~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~L~F~~f~le~~~----~C~~D~l~I~dg~~ 65 (286)
T 1nt0_A 3 WPEPVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSY----RCEYDFVKLTSGTK 65 (286)
T ss_dssp --CCCEEEEECTTTTSCCCSSCCEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEEETTE
T ss_pred cccCCCceEeCCCCCccCcCCCcEEEEEEcCCCCEEEEEEEEEEecCCC----CCCCcEEEEECCCe
Confidence 4567889999999999999999999999999999999999999999865 89999999999863
No 21
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.68 E-value=4.2e-17 Score=106.75 Aligned_cols=60 Identities=18% Similarity=0.618 Sum_probs=55.4
Q ss_pred cCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCCC
Q psy11864 116 DACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 188 (193)
Q Consensus 116 ~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~~ 188 (193)
..||+.+...+|.|+|| ||++.+|.|.|++|++++|.|+|.+|+| .|.+|+|+||||.+.
T Consensus 7 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~i~dg~~~ 66 (116)
T 1spp_B 7 DECGRVIKDTSGSISNT-----DRQKNLCTWTILMKPDQKVRMAIPYLNL--------ACGKEYVEVFDGLLS 66 (116)
T ss_dssp GGTTEEECCSEEEEECC-----SSCCSEEEEEEECCTTCEEEEEEEEEEC--------CBTTEEEEEESSSTT
T ss_pred CCCCCEEeCCceEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeCcc--------cCCCCEEEEEcCCCC
Confidence 57999998889999998 8889999999999999999999999998 478899999999864
No 22
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=99.67 E-value=8.6e-17 Score=104.97 Aligned_cols=61 Identities=25% Similarity=0.724 Sum_probs=55.6
Q ss_pred ccCCCCCcccCCCCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEeeEEeecCCCCCCCCCCcEEEEEeCCCC
Q psy11864 115 LDACGGILNTPNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGD 188 (193)
Q Consensus 115 ~~~C~~~~~~~~g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~~f~l~~~~~~~~~C~~D~l~I~dg~~~ 188 (193)
...||+.+...+|.|+|| ||++.+|.|.|++|++++|.|+|.+|+| .|.+|||+||||.+.
T Consensus 7 ~~~Cgg~l~~~~G~i~Sp-----y~~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~i~dg~~~ 67 (114)
T 1sfp_A 7 NTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQL--------NCNKESLEIIDGLPG 67 (114)
T ss_dssp ECSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEEC--------CTTTEEEEEESSSTT
T ss_pred CCCCCCeEECCcEEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeeee--------ecCCCEEEEEcCCCC
Confidence 368999998889999997 7889999999999999999999999997 588899999999874
No 23
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=99.65 E-value=3.2e-16 Score=102.40 Aligned_cols=70 Identities=36% Similarity=0.741 Sum_probs=63.4
Q ss_pred CEEEee-EEeecCC--CCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEeccc
Q psy11864 1 VALKFQ-SFEIENH--DQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMK 74 (193)
Q Consensus 1 I~l~F~-~f~le~~--~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~ 74 (193)
|+|+|. .|+||.. ..|.+|+|+|+||. ..++++||...|..++|+++.|+|+|++|.....+||++.|++
T Consensus 43 i~l~f~d~f~le~~~~~~C~~D~l~i~dg~----~~~~~~CG~~~p~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~a 115 (115)
T 3poj_A 43 VTLQFEDIFDIEDHPEVPCPYDYIKIKAGS----KVWGPFCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSYRA 115 (115)
T ss_dssp CEEEECSCCBBCCCSSSSSCSCEEEEEETT----EEEEEECBSSCCCCEECCCSEEEEEEECCSSCCCCBCEEEEEC
T ss_pred EEEEEecceecccCCCCCCCCeEEEEEcCC----cccccCcCCCCCCCEEecCCEEEEEEEcCCCCCCCCEEEEEEC
Confidence 789999 5999975 48999999999983 4789999999999999999999999999999999999999864
No 24
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.64 E-value=2.1e-16 Score=103.41 Aligned_cols=69 Identities=22% Similarity=0.376 Sum_probs=63.4
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEecccc
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKE 75 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~ 75 (193)
|+|+|.+|+| +|.+|+|+||||... +++++++||.. |..++|++|.|+|+|++|.....+||.+.|.+.
T Consensus 42 I~l~f~~f~l----~C~~D~l~i~dg~~~-~~~~~~~CG~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 110 (116)
T 1spp_B 42 VRMAIPYLNL----ACGKEYVEVFDGLLS-GPSYGKLCAGA-AIVFLSTANTMTIKYNRISGNSSSPFLIYFYGS 110 (116)
T ss_dssp EEEEEEEEEC----CBTTEEEEEESSSTT-SCEEEEESEEE-EEEEECSSSEEEEEEEESSCSCCCCCEEEEEEE
T ss_pred EEEEEeeCcc----cCCCCEEEEEcCCCC-CcccccccCcC-CCCEEecCCEEEEEEEECCCCCCCCEEEEEEEe
Confidence 6899999999 488999999999876 78899999988 889999999999999999999999999999873
No 25
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=121.85 Aligned_cols=75 Identities=39% Similarity=0.760 Sum_probs=68.3
Q ss_pred CEEEeeEEeecCC------CCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEeccc
Q psy11864 1 VALKFQSFEIENH------DQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMK 74 (193)
Q Consensus 1 I~l~F~~f~le~~------~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~ 74 (193)
|+|+|.+|+||.+ ..|.+|||+||||.....+++++|||...|..++|+++.|+|+|+||.+....||++.|.+
T Consensus 46 I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~ 125 (460)
T 2qqo_A 46 IILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYL 125 (460)
T ss_dssp EEEEEEEEECCCC--------CCSSEEEEESSSTTTSCEEEEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred EEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCCCcccceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEE
Confidence 6899999999975 4799999999999887788999999999999999999999999999999999999999987
Q ss_pred c
Q psy11864 75 E 75 (193)
Q Consensus 75 ~ 75 (193)
.
T Consensus 126 ~ 126 (460)
T 2qqo_A 126 V 126 (460)
T ss_dssp E
T ss_pred E
Confidence 4
No 26
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=99.64 E-value=3.1e-16 Score=102.30 Aligned_cols=69 Identities=23% Similarity=0.532 Sum_probs=62.8
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEecccc
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKE 75 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~ 75 (193)
|+|+|.+|+| .|.+|||+|+||... ++++++|||.. |..++|++|.|+|+|++|.....+||.|.|.+.
T Consensus 43 I~l~f~~f~l----~C~~D~l~i~dg~~~-~~~~~~~CG~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 111 (114)
T 1sfp_A 43 VRVSIQYLQL----NCNKESLEIIDGLPG-SPVLGKICEGS-LMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 111 (114)
T ss_dssp EEEEEEEEEC----CTTTEEEEEESSSTT-SCEEEEESEEE-EEEEECSSSEEEEEEEECTTSCCCCCEEEEEEE
T ss_pred EEEEEeeeee----ecCCCEEEEEcCCCC-CcceeEecCcC-CCCEEecCCeEEEEEEECCCCCCCCEEEEEEEE
Confidence 6899999998 488999999999874 77899999988 889999999999999999999999999999763
No 27
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=99.63 E-value=7.4e-16 Score=122.98 Aligned_cols=75 Identities=41% Similarity=0.725 Sum_probs=69.6
Q ss_pred CEEEeeEEeecCCC------CCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEeccc
Q psy11864 1 VALKFQSFEIENHD------QCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMK 74 (193)
Q Consensus 1 I~l~F~~f~le~~~------~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~ 74 (193)
|+|+|.+|+||.+. .|.+|||+||||....++++++|||...|..++|+++.|+|+|+||.+....||.+.|.+
T Consensus 49 I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~ 128 (450)
T 2qqm_A 49 IILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSV 128 (450)
T ss_dssp EEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEEEEECTTCCCCEEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred EEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCCccceeecCCcCCCcEEEcCCEEEEEEEeCCccccCCeEEEEec
Confidence 68999999999864 799999999999887788999999999999999999999999999999999999999987
Q ss_pred c
Q psy11864 75 E 75 (193)
Q Consensus 75 ~ 75 (193)
.
T Consensus 129 ~ 129 (450)
T 2qqm_A 129 L 129 (450)
T ss_dssp C
T ss_pred c
Confidence 5
No 28
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=99.63 E-value=1.1e-15 Score=125.30 Aligned_cols=80 Identities=39% Similarity=0.681 Sum_probs=72.7
Q ss_pred CEEEeeEEeecCCC------CCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEeccc
Q psy11864 1 VALKFQSFEIENHD------QCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMK 74 (193)
Q Consensus 1 I~l~F~~f~le~~~------~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~ 74 (193)
|+|+|.+|+||.+. .|.+|||+||||....++++++|||...|..|+|++|.|+|+|+||.+...+||+|.|++
T Consensus 167 I~L~F~~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~~~~lg~~CG~~~P~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~ 246 (577)
T 4gz9_A 167 IILEFESFDLEQDSNPPGGMFCRYDRLEIWDGFPEVGPHIGRYCGQKTPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSV 246 (577)
T ss_dssp EEEEEEEEECCCCCSCSTTCCCCSSEEEEESSSTTTSCEEEEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred EEEEEEEEEeeecCCCCCCCccCccEEEEEcCCCCCCceeEEEeCCCCCCCcceeCCEEEEEEEECCCCCCceEEEEEEE
Confidence 67999999999754 399999999999988889999999999999999999999999999999999999999998
Q ss_pred cccccc
Q psy11864 75 EFDECA 80 (193)
Q Consensus 75 ~~~~c~ 80 (193)
....|.
T Consensus 247 v~~~~s 252 (577)
T 4gz9_A 247 LQSSIS 252 (577)
T ss_dssp CCCCCC
T ss_pred Eccccc
Confidence 655554
No 29
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.62 E-value=3.8e-16 Score=101.04 Aligned_cols=68 Identities=18% Similarity=0.469 Sum_probs=61.6
Q ss_pred CEEEeeEEeecCCCCCCCcEEEEEeCCCCCCCcccCccCccCCCceEecCCEEEEEEecCCCCCCCCceEecccc
Q psy11864 1 VALKFQSFEIENHDQCTYDYVEIRDGHAPDSPIIGTYCGYKLPPDIKSSGTKLMIKFVSDGSVQKPGFSAIFMKE 75 (193)
Q Consensus 1 I~l~F~~f~le~~~~C~~d~l~v~dg~~~~~~~~~~~cg~~~p~~i~s~~~~l~v~f~sd~~~~~~GF~~~~~~~ 75 (193)
|+|+|.+|+| +|.+|||+||||... ++++++|||.. |..++| +|.|+|+|+||.+...+||++.|.+.
T Consensus 39 I~l~f~~f~l----~C~~D~l~I~dg~~~-~~~~~~~CG~~-p~~~~S-~n~l~v~F~Sd~~~~~~GF~~~y~~~ 106 (109)
T 1spp_A 39 LLVSIPTLNL----TCGKEYVEVLEGAPG-SKSLGKFCEGL-SILNRG-SSGMTVKYKRDSGHPASPYEIIFLRD 106 (109)
T ss_dssp EEEEEEEEEC----CTTTEEEEEESSSTT-SCEEEEESEEE-EEEEEE-CTTCEEEEEECTTCCCCCCEEEEEEE
T ss_pred EEEEEeeeec----cCCCCEEEEEeCCCC-CchhhhhhCCC-CCCEEE-CCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence 6899999998 488999999999865 77899999986 888999 99999999999999999999999763
No 30
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=99.60 E-value=7.8e-16 Score=126.38 Aligned_cols=70 Identities=39% Similarity=0.797 Sum_probs=61.7
Q ss_pred cCCCCCccc-CCCCccCCCCCCCCCCCCceEEEEEcCC-CCeEEEEEe-eEEeecCCCCCCCCCCcEEEEEeCCCCcc
Q psy11864 116 DACGGILNT-PNGTLTSPSFPDLYIKNKTCIWEIVAPP-QYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSF 190 (193)
Q Consensus 116 ~~C~~~~~~-~~g~i~Sp~~p~~y~~~~~C~w~I~~~~-~~~i~l~F~-~f~l~~~~~~~~~C~~D~l~I~dg~~~~~ 190 (193)
..||+.+.. .+|.|+||+||..||++.+|.|.|.+|. +++|.|.|. .|+||.. .|.+|||+||||.+...
T Consensus 4 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~~~~~I~l~F~~~f~le~~-----~C~~D~l~i~dg~~~~~ 76 (579)
T 2qqk_A 4 PPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKH-----DCKYDFIEIRDGDSESA 76 (579)
T ss_dssp -CCCEEEETTSCEEEECTTTTSCCCSSCCEEEEEECSSTTSEEEEEECSCCBCCCT-----TSSSSEEEEEESSSTTS
T ss_pred CCCCCEEEeCCCeEEeCCCCCCCCcCCCEEEEEEEECCCCcEEEEEEecccccccC-----CCCeeEEEEEeCCCCCc
Confidence 469998864 6899999999999999999999999995 689999999 8999973 79999999999986543
No 31
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.21 E-value=9.6e-07 Score=51.47 Aligned_cols=42 Identities=36% Similarity=0.773 Sum_probs=38.4
Q ss_pred ccccccCCCCCccceeecCCC-ceEEeccCCeEEccCCccccc
Q psy11864 75 EFDECALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 75 ~~~~c~~~~~~c~~~c~~~~~-~~~c~c~~g~~l~~~~~~C~~ 116 (193)
+.++|...+++|.+.|.+..+ ++.|.|++||.|..++++|.+
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 467898888899999999999 899999999999999999975
No 32
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.17 E-value=1.2e-06 Score=48.76 Aligned_cols=40 Identities=33% Similarity=0.856 Sum_probs=35.9
Q ss_pred ccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 77 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 77 ~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
++|...+..|.+.|.+.++++.|.|++||.|..++.+|.+
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 5677777789999999999999999999999999998874
No 33
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.02 E-value=4.5e-06 Score=47.04 Aligned_cols=38 Identities=37% Similarity=0.809 Sum_probs=33.7
Q ss_pred ccCCCCCccceeecCC-CceEEeccCCeEEccCCccccc
Q psy11864 79 CALEDHGCEHTCKNIL-GGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 79 c~~~~~~c~~~c~~~~-~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
|...+++|.+.|.+.+ +++.|.|++||.|..++++|.+
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 5556778999999999 6999999999999999999975
No 34
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.02 E-value=2.5e-06 Score=46.60 Aligned_cols=38 Identities=37% Similarity=0.942 Sum_probs=33.4
Q ss_pred ccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 79 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 79 c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
|...+..|.+.|.+..+++.|.|++||.|..++++|.+
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~d 38 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS 38 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence 34456789999999999999999999999999999874
No 35
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.00 E-value=3.9e-06 Score=46.22 Aligned_cols=38 Identities=39% Similarity=0.912 Sum_probs=33.7
Q ss_pred ccCCCCCccceeecCCC-ceEEeccCCeEEccCCccccc
Q psy11864 79 CALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 79 c~~~~~~c~~~c~~~~~-~~~c~c~~g~~l~~~~~~C~~ 116 (193)
|...+.+|.+.|.+..+ ++.|.|++||.|..++++|.+
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d 40 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence 55567789999999998 799999999999999999975
No 36
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.96 E-value=1e-05 Score=44.47 Aligned_cols=42 Identities=48% Similarity=1.085 Sum_probs=34.8
Q ss_pred ccccccCC--------CCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 75 EFDECALE--------DHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 75 ~~~~c~~~--------~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
.+++|... ...|.+.|.+..+++.|.|++||.+..++.+|.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 35677654 3678899999999999999999999988888854
No 37
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.37 E-value=0.00019 Score=48.23 Aligned_cols=68 Identities=26% Similarity=0.531 Sum_probs=50.4
Q ss_pred CCCceEecccccccccCCCCCcccee-ecCCCceEEeccCCeEEccCCcccccCCCCCcccCCCCccCCCCCC
Q psy11864 65 KPGFSAIFMKEFDECALEDHGCEHTC-KNILGGYECSCKIGYELHSDGKICLDACGGILNTPNGTLTSPSFPD 136 (193)
Q Consensus 65 ~~GF~~~~~~~~~~c~~~~~~c~~~c-~~~~~~~~c~c~~g~~l~~~~~~C~~~C~~~~~~~~g~i~Sp~~p~ 136 (193)
..||........++|...+..|.+.| .+..+++.|.|++||.+..++..|.+. ...+-|.+.+++.|.
T Consensus 74 ~~G~~G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~----~~~pCg~~~~~~~~~ 142 (146)
T 1x7a_L 74 QVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPA----VPFPCGRVSVSHSPT 142 (146)
T ss_dssp CSSEESTTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEEC----SSSCTTCCCTTTTTT
T ss_pred CCCCcCCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCC----CCCCCCCcccCcCCc
Confidence 46777666556678887667888899 999999999999999999888888652 222345556666654
No 38
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.33 E-value=0.00015 Score=54.17 Aligned_cols=47 Identities=43% Similarity=0.883 Sum_probs=42.0
Q ss_pred cccccCC-CCCccceeecCCCceEEeccCCeEEccCCccccc----CCCCCc
Q psy11864 76 FDECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICLD----ACGGIL 122 (193)
Q Consensus 76 ~~~c~~~-~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~----~C~~~~ 122 (193)
.++|... +++|.+.|.+..+++.|+|++||.+..+.++|.. .||...
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~~~ 53 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLT 53 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTCCC
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccccCccc
Confidence 5789888 8999999999999999999999999999999997 888654
No 39
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.96 E-value=0.00032 Score=53.87 Aligned_cols=39 Identities=41% Similarity=0.973 Sum_probs=27.4
Q ss_pred ccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 77 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 77 ~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
++|. .+..|.+.|.+..+++.|.|++||.+..++++|..
T Consensus 2 ~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 2 NECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEE
T ss_pred cccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccc
Confidence 5787 56789999999999999999999999999999974
No 40
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.80 E-value=0.00052 Score=41.56 Aligned_cols=50 Identities=28% Similarity=0.646 Sum_probs=37.2
Q ss_pred CCCceEe-----cccccccccCCCCCcc-ceeecCCCceEEeccCCeEEccCCccc
Q psy11864 65 KPGFSAI-----FMKEFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC 114 (193)
Q Consensus 65 ~~GF~~~-----~~~~~~~c~~~~~~c~-~~c~~~~~~~~c~c~~g~~l~~~~~~C 114 (193)
..||.+. ....+++|......|. ..|.+..+++.|.|++||.+..++++|
T Consensus 30 ~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 30 DEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp CSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred CCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence 3566543 2335677876555565 589999999999999999988877766
No 41
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.75 E-value=0.0013 Score=42.03 Aligned_cols=52 Identities=35% Similarity=0.784 Sum_probs=40.5
Q ss_pred CCCceEecccc---cccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 65 KPGFSAIFMKE---FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~~~~~~---~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..||....... .++|...+..|.+.|.+..+++.|.|++||.+..+++.|.+
T Consensus 40 ~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 40 RSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp CTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred CCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence 35665554433 24677667788889999999999999999999998888864
No 42
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.68 E-value=0.0041 Score=48.59 Aligned_cols=38 Identities=37% Similarity=0.941 Sum_probs=29.5
Q ss_pred ccccCCCCCccceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 77 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 77 ~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
++|...+..|.+.|.+.++++.|.|++||.+ .++..|.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~ 38 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCE 38 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEE
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCccc
Confidence 3676666778888999889999999999987 4566664
No 43
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.68 E-value=0.001 Score=46.70 Aligned_cols=52 Identities=29% Similarity=0.671 Sum_probs=35.9
Q ss_pred CCCceEecccc-c-ccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 65 KPGFSAIFMKE-F-DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~~~~~~-~-~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..||....... + ++|...+..|.+.|.+..+++.|.|++||.+..++..|..
T Consensus 68 ~~Gf~G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 68 LEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp -------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCCceeccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence 46777666554 4 6788777788889999999999999999999999998874
No 44
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.68 E-value=0.0014 Score=41.41 Aligned_cols=55 Identities=27% Similarity=0.542 Sum_probs=37.7
Q ss_pred cCCCCCCCCceEecccccccccCCCCCccceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 59 SDGSVQKPGFSAIFMKEFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 59 sd~~~~~~GF~~~~~~~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
.+......||..... .+++|...+..|.+.|.+..+++.|.|++||.+. ++..|.
T Consensus 13 ~~~~~~~~~~~~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~ 67 (107)
T 2w2n_E 13 YDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCE 67 (107)
T ss_dssp -------CCCCSCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEE
T ss_pred ccccccCCCcCCCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccc
Confidence 334444566655544 5788887777888999999999999999999974 445554
No 45
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.62 E-value=0.0013 Score=43.38 Aligned_cols=52 Identities=29% Similarity=0.671 Sum_probs=34.9
Q ss_pred CCCceEecccc-c-ccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 65 KPGFSAIFMKE-F-DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~~~~~~-~-~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..||....... + ++|...+..|.+.|.+..+++.|.|++||.+..++..|.+
T Consensus 68 ~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 68 LEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp -------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCc
Confidence 46676655544 4 6787766678889999999999999999999988888864
No 46
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.44 E-value=0.0025 Score=48.13 Aligned_cols=41 Identities=27% Similarity=0.611 Sum_probs=35.2
Q ss_pred ccccccCC---CCCccceeecCC------CceEEeccCCeEEccCCcccc
Q psy11864 75 EFDECALE---DHGCEHTCKNIL------GGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 75 ~~~~c~~~---~~~c~~~c~~~~------~~~~c~c~~g~~l~~~~~~C~ 115 (193)
..++|... +++|.+.|...+ +++.|.|+.||.|..++++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 34678877 889999999875 579999999999999999885
No 47
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.43 E-value=0.0018 Score=53.56 Aligned_cols=42 Identities=43% Similarity=0.856 Sum_probs=38.0
Q ss_pred ccccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 75 EFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 75 ~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..++|...+++|.+.|...++++.|.|+.||.|..++++|..
T Consensus 577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCCC
Confidence 457898888999999999999999999999999999998864
No 48
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.40 E-value=0.0015 Score=54.27 Aligned_cols=46 Identities=30% Similarity=0.778 Sum_probs=40.7
Q ss_pred ccccccCCCCCccceeecCC-CceEEeccCCeEEccCCcccccCCCC
Q psy11864 75 EFDECALEDHGCEHTCKNIL-GGYECSCKIGYELHSDGKICLDACGG 120 (193)
Q Consensus 75 ~~~~c~~~~~~c~~~c~~~~-~~~~c~c~~g~~l~~~~~~C~~~C~~ 120 (193)
..++|...+.+|.+.|.+.+ +++.|.|++||.+..++++|...+..
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~ 310 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTF 310 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSE
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccce
Confidence 46789888889999999998 99999999999999999999876544
No 49
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.38 E-value=0.00079 Score=42.61 Aligned_cols=49 Identities=35% Similarity=0.846 Sum_probs=6.6
Q ss_pred CCCceE---ecccccccccCCCCCccceeecCCCceEEeccCCeEEccCCccc
Q psy11864 65 KPGFSA---IFMKEFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 114 (193)
Q Consensus 65 ~~GF~~---~~~~~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C 114 (193)
..||.+ ....++++|.. ...|.+.|.+..+++.|.|++||.+..++.+|
T Consensus 55 ~~Gy~g~~g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 55 PDGFQLVAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp CTTCEEETTTEEEC---------------------------------------
T ss_pred CCCccccCCCccccccccCC-CCCcCCeeecCCCCEEEECCCCceECCCCCcc
Confidence 477876 34446788863 34688899999999999999999988777766
No 50
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.35 E-value=0.0023 Score=48.44 Aligned_cols=42 Identities=33% Similarity=0.816 Sum_probs=36.3
Q ss_pred cccccCCCCCccceeecCCC--ceEEeccCCeEEccCCcccccC
Q psy11864 76 FDECALEDHGCEHTCKNILG--GYECSCKIGYELHSDGKICLDA 117 (193)
Q Consensus 76 ~~~c~~~~~~c~~~c~~~~~--~~~c~c~~g~~l~~~~~~C~~~ 117 (193)
.+.|...+.+|.+.|+..++ ++.|.|+.||.|..++++|.+.
T Consensus 267 ~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 267 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred ccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 46788888899999998876 6899999999999999999763
No 51
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.35 E-value=0.006 Score=46.07 Aligned_cols=57 Identities=39% Similarity=0.827 Sum_probs=45.6
Q ss_pred CCCceEeccc-ccccccCC-CCCccceeecCCCceEEeccCCeEEccCCccccc----CCCCC
Q psy11864 65 KPGFSAIFMK-EFDECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICLD----ACGGI 121 (193)
Q Consensus 65 ~~GF~~~~~~-~~~~c~~~-~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~----~C~~~ 121 (193)
..||...... +.++|... ...|.+.|.+..+++.|.|++||.+..+.+.|.+ .|+..
T Consensus 31 ~~g~~g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~cg~~ 93 (317)
T 3h5c_B 31 SPGYEGSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVL 93 (317)
T ss_dssp SSSCCSSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEECSSCCCCCC
T ss_pred CCCCcCCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccccccccccccccccc
Confidence 4677666665 77889763 4688889999999999999999999888888886 55543
No 52
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.27 E-value=0.0023 Score=43.49 Aligned_cols=49 Identities=33% Similarity=0.836 Sum_probs=38.5
Q ss_pred CceEe----cccccccccCCCCCcc-ceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 67 GFSAI----FMKEFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 67 GF~~~----~~~~~~~c~~~~~~c~-~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
||... ....+++|......|. ..|++..+++.|.|++||.+..++++|.
T Consensus 109 G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 109 GFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp TEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred CcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 77774 2246788876555676 4899999999999999999988888773
No 53
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.17 E-value=0.0011 Score=51.64 Aligned_cols=33 Identities=36% Similarity=0.887 Sum_probs=16.3
Q ss_pred CCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 84 HGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 84 ~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..|.+.|.+..+++.|.|.+||.+..+++.|..
T Consensus 51 ~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 51 GYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp -CCTTEEC-----CCEECCTTEEECTTSSCEEE
T ss_pred CcccCcCCCCCCCCeEEECCCceEcCCCCeECC
Confidence 345555666666666666666666655555554
No 54
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.16 E-value=0.002 Score=50.04 Aligned_cols=32 Identities=41% Similarity=1.090 Sum_probs=0.0
Q ss_pred CCccceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 84 HGCEHTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 84 ~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
..|.+.|.+..+++.|.|++||.+..+++.|.
T Consensus 11 ~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~ 42 (386)
T 3v65_B 11 GGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ 42 (386)
T ss_dssp --------------------------------
T ss_pred CCCCCCCcCCCCCcEeECCCCceECCCCCccC
Confidence 46778899999999999999999888888775
No 55
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.09 E-value=0.0063 Score=36.78 Aligned_cols=40 Identities=43% Similarity=0.931 Sum_probs=32.2
Q ss_pred cccccCCCCCc-cceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 76 FDECALEDHGC-EHTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 76 ~~~c~~~~~~c-~~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
+++|......| ...|.+..+++.|.|++||.+..++..|.
T Consensus 3 ideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~ 43 (87)
T 1z6c_A 3 VDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE 43 (87)
T ss_dssp SCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEE
T ss_pred cccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCC
Confidence 46776655556 45799999999999999999887777775
No 56
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=95.85 E-value=0.0033 Score=41.98 Aligned_cols=50 Identities=32% Similarity=0.792 Sum_probs=38.7
Q ss_pred CCCceE---ecccccccccCCCCCccc-eeecCCCceEEeccCCeEEccCCccc
Q psy11864 65 KPGFSA---IFMKEFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKIC 114 (193)
Q Consensus 65 ~~GF~~---~~~~~~~~c~~~~~~c~~-~c~~~~~~~~c~c~~g~~l~~~~~~C 114 (193)
..||.+ .....+++|......|.+ .|.+..+++.|.|++||.+..++++|
T Consensus 93 ~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 93 GKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC 146 (147)
T ss_dssp CTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred CCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCee
Confidence 567853 233467888765556764 89999999999999999998888776
No 57
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.83 E-value=0.0081 Score=39.90 Aligned_cols=52 Identities=35% Similarity=0.747 Sum_probs=38.8
Q ss_pred CCCceEecccc-ccc---ccCCCCCccceeecCCC-ceEEeccCCeEEccCCccccc
Q psy11864 65 KPGFSAIFMKE-FDE---CALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~~~~~~-~~~---c~~~~~~c~~~c~~~~~-~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..||....... .+. |...+..|.+.|.+..+ ++.|.|++||.+..+++.|.+
T Consensus 73 ~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 73 LPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp CTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred CCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence 46666544432 344 44456678889999999 999999999999998888864
No 58
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=95.68 E-value=0.02 Score=33.16 Aligned_cols=37 Identities=27% Similarity=0.545 Sum_probs=25.5
Q ss_pred ccccccCCCCCcc--ceeecCCCceEEec-cCCeEEccCC
Q psy11864 75 EFDECALEDHGCE--HTCKNILGGYECSC-KIGYELHSDG 111 (193)
Q Consensus 75 ~~~~c~~~~~~c~--~~c~~~~~~~~c~c-~~g~~l~~~~ 111 (193)
++++|......|. ..|.+..+++.|.+ ..||....++
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~ 41 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHG 41 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccC
Confidence 3577876666775 47999999999983 3455544333
No 59
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.63 E-value=0.0058 Score=47.76 Aligned_cols=51 Identities=33% Similarity=0.797 Sum_probs=40.4
Q ss_pred CCCceE---ecccccccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 65 KPGFSA---IFMKEFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~---~~~~~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..||.+ .-+...++|.. ...|.+.|.+..+++.|.|.+||.+..++.+|..
T Consensus 26 ~~G~~~~~~~~C~dideC~~-~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~ 79 (400)
T 3p5b_L 26 PDGFQLVAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 79 (400)
T ss_dssp CTTEEECSSSCEEECCCCST-TSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCC
T ss_pred CCCCCcCCCCcccCchhhhc-cCCCCCccCCCccceeeeccccccccccccceee
Confidence 456664 23446788873 4579899999999999999999999988888864
No 60
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=95.20 E-value=0.014 Score=38.69 Aligned_cols=42 Identities=29% Similarity=0.730 Sum_probs=33.2
Q ss_pred cccccccCCCCCcc--ceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 74 KEFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 74 ~~~~~c~~~~~~c~--~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
..+++|......|. ..|.+..+++.|.|++||.+..+...|.
T Consensus 94 ~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 137 (143)
T 2bou_A 94 QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQ 137 (143)
T ss_dssp EECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSB
T ss_pred CCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCc
Confidence 35677765455676 6899999999999999999887777664
No 61
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.01 E-value=0.0069 Score=38.87 Aligned_cols=48 Identities=27% Similarity=0.564 Sum_probs=33.5
Q ss_pred CCCceEe---cccccccccCCCCCccceeecCCCceEEeccCCeEEccC-Ccc
Q psy11864 65 KPGFSAI---FMKEFDECALEDHGCEHTCKNILGGYECSCKIGYELHSD-GKI 113 (193)
Q Consensus 65 ~~GF~~~---~~~~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~-~~~ 113 (193)
..||.+. ....+++|... ..|.+.|.+..+++.|.|++||.+..+ +++
T Consensus 66 ~~Gy~~~~g~~C~dideC~~~-~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~ 117 (118)
T 1dx5_I 66 PEGYILDDGFICTDIDECENG-GFCSGVCHNLPGTFECICGPDSALAGQIGTD 117 (118)
T ss_dssp CTTEEEETTTEEEECCHHHHC-SSCSSEEEECSSSEEEEECSSSSCEEEESCC
T ss_pred CCCccCCCCCccccccccCCC-CCCcCeEEeCCCCEEEECCCCCccCCCCCCC
Confidence 3677643 33356777652 467778999999999999999987655 443
No 62
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=94.88 E-value=0.024 Score=33.75 Aligned_cols=35 Identities=43% Similarity=1.066 Sum_probs=21.7
Q ss_pred ccccccCCCCCcc-ceeecCCCceEEeccCCeEEccC
Q psy11864 75 EFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSD 110 (193)
Q Consensus 75 ~~~~c~~~~~~c~-~~c~~~~~~~~c~c~~g~~l~~~ 110 (193)
.+++|... ..|. ..|.+..+++.|.|++||.+..+
T Consensus 43 dideC~~~-~~C~~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 43 DTDECSVG-NPCGNGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp ECCGGGTC-CTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred CcccccCC-CCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence 45666532 2343 46777777777777777765544
No 63
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=94.72 E-value=0.033 Score=33.41 Aligned_cols=41 Identities=37% Similarity=0.808 Sum_probs=30.7
Q ss_pred ccccccCCCCCccc-eeecCCCceEEeccCCeEEcc-CCcccc
Q psy11864 75 EFDECALEDHGCEH-TCKNILGGYECSCKIGYELHS-DGKICL 115 (193)
Q Consensus 75 ~~~~c~~~~~~c~~-~c~~~~~~~~c~c~~g~~l~~-~~~~C~ 115 (193)
++++|......|.+ .|.+..+++.|.|++||.+.. ++..|.
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~ 44 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEE
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccC
Confidence 35677766556754 899999999999999998753 355554
No 64
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=94.72 E-value=0.012 Score=35.47 Aligned_cols=50 Identities=36% Similarity=0.764 Sum_probs=36.0
Q ss_pred CCCceEe----cccccccccCCCCCccceeecCCCceEEec--cCCeEEccCCccccc
Q psy11864 65 KPGFSAI----FMKEFDECALEDHGCEHTCKNILGGYECSC--KIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~~----~~~~~~~c~~~~~~c~~~c~~~~~~~~c~c--~~g~~l~~~~~~C~~ 116 (193)
..||.+. ....+++|.. ..|.+.|.+..+++.|.| .+||.+..+...|.+
T Consensus 30 ~~G~~~~~~g~~C~dideC~~--~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~d 85 (87)
T 1z6c_A 30 PEGYRYNLKSKSCEDIDECSE--NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCEV 85 (87)
T ss_dssp STTCEEETTTTEEECCCHHHH--SCCSSEECCCSSSCCEECCSSSCCBCCTTSSSCBC
T ss_pred CCCceECCCCCcCCCcCeeCC--CCCCCEEEccCCCEEEECCCCcCCcccCCCCcceE
Confidence 4566642 2335677753 457789999999999999 688888777776653
No 65
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.46 E-value=0.024 Score=43.35 Aligned_cols=41 Identities=24% Similarity=0.673 Sum_probs=35.7
Q ss_pred ccccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 75 EFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 75 ~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..+.|...+++|.+.|+..++.+.|.|+.||. ..++++|..
T Consensus 303 ~~n~C~~~~g~C~~lCl~~~~~~~C~C~~g~~-~~d~~~C~~ 343 (349)
T 3v64_C 303 GKNRCGDNNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAL 343 (349)
T ss_dssp CCCTTTTGGGGCSSEEECCTTSCEEECCTTEE-EETTTEEEE
T ss_pred ccCcccCCCCCcccEeecCCCCCeeECCCCCc-CCCCCcccc
Confidence 34678888889999999999999999999999 888888863
No 66
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=94.41 E-value=0.044 Score=37.04 Aligned_cols=41 Identities=32% Similarity=0.749 Sum_probs=32.3
Q ss_pred ccccccCCCCCc-cceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 75 EFDECALEDHGC-EHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 75 ~~~~c~~~~~~c-~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
++++|... ..| .+.|.+..+++.|.|++||.+..++..|.+
T Consensus 2 dideC~~~-~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d 43 (162)
T 1uzk_A 2 DVNECLDP-TTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43 (162)
T ss_dssp CCCGGGST-TSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred ccccCCCC-CCCCCCEeECCCCCEEEeCCCCCeECCCCCcccC
Confidence 35677642 245 368999999999999999999888888864
No 67
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=94.02 E-value=0.045 Score=32.51 Aligned_cols=38 Identities=42% Similarity=1.024 Sum_probs=28.0
Q ss_pred ccccccCCCCCccc-eeecCCCceEEeccCCeEEccCCcccc
Q psy11864 75 EFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 75 ~~~~c~~~~~~c~~-~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
++++|.. ...|.+ .|.+..+++.|.|++||.+ ++..|.
T Consensus 4 dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~ 42 (82)
T 1emn_A 4 DMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECV 42 (82)
T ss_dssp CCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEE
T ss_pred ccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccC
Confidence 4567765 345654 8999999999999999986 344554
No 68
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.93 E-value=0.037 Score=45.81 Aligned_cols=42 Identities=33% Similarity=0.825 Sum_probs=36.2
Q ss_pred ccccccCCCCCccceeecCC--CceEEeccCCeEEccCCccccc
Q psy11864 75 EFDECALEDHGCEHTCKNIL--GGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 75 ~~~~c~~~~~~c~~~c~~~~--~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..++|...+.+|.+.|...+ .++.|.|++||.+..++++|..
T Consensus 271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence 35678888889999999876 4699999999999999999975
No 69
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=93.74 E-value=0.019 Score=42.47 Aligned_cols=40 Identities=28% Similarity=0.825 Sum_probs=30.3
Q ss_pred ccccccCCCCCcc--ceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 75 EFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 75 ~~~~c~~~~~~c~--~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
+.++|....+.|. ..|.+..+++.|.|.+||. .++..|.+
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d 45 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA 45 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEE
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCC
Confidence 4678876667786 4799999999999999997 56667764
No 70
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.47 E-value=0.12 Score=44.00 Aligned_cols=55 Identities=31% Similarity=0.759 Sum_probs=38.2
Q ss_pred cccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc--------CCCCCcccCCCCccC
Q psy11864 76 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD--------ACGGILNTPNGTLTS 131 (193)
Q Consensus 76 ~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~--------~C~~~~~~~~g~i~S 131 (193)
.++|...+..|.+.|.+..+++.|.|++||.+ .++..|.+ .|++...+..|.+..
T Consensus 312 ~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~~~~C~~~C~n~~gsy~C 374 (791)
T 3m0c_C 312 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKC 374 (791)
T ss_dssp CCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSSSSSCTTTCCBCSSCBCC
T ss_pred cccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccCCCCCCCCeeecCCCCcee
Confidence 34555556678889999999999999999998 66677752 344444444555443
No 71
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.91 E-value=0.074 Score=44.09 Aligned_cols=40 Identities=30% Similarity=0.569 Sum_probs=33.7
Q ss_pred cccccCCCCCccceeecCCC-ceEEeccCCeEEccCCcccc
Q psy11864 76 FDECALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 76 ~~~c~~~~~~c~~~c~~~~~-~~~c~c~~g~~l~~~~~~C~ 115 (193)
.+.|...+++|.+.|...+. ...|.|+.|+.|..++++|.
T Consensus 579 ~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~ 619 (628)
T 4a0p_A 579 QHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCG 619 (628)
T ss_dssp HSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEE
T ss_pred cccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCC
Confidence 46788888999999987654 67899999999999988764
No 72
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=92.68 E-value=0.1 Score=25.94 Aligned_cols=29 Identities=38% Similarity=0.944 Sum_probs=21.2
Q ss_pred cccccCCCCCcc--ceeecCCCceEEeccCCeE
Q psy11864 76 FDECALEDHGCE--HTCKNILGGYECSCKIGYE 106 (193)
Q Consensus 76 ~~~c~~~~~~c~--~~c~~~~~~~~c~c~~g~~ 106 (193)
.++|... .|. .+|.+..+++.|.|++||.
T Consensus 3 ~d~C~~~--pC~ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 3 GDQCESN--PCLNGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCTTTTC--CCCTTCEEEEETTEEEEECCTTCC
T ss_pred cccCCCC--CCCCCCEeEcCCCceEeECCCCCc
Confidence 3455432 344 4788889999999999996
No 73
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.61 E-value=0.06 Score=45.89 Aligned_cols=51 Identities=33% Similarity=0.841 Sum_probs=40.3
Q ss_pred CCCceE---ecccccccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 65 KPGFSA---IFMKEFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~---~~~~~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..||.+ .....+++|. ....|.+.|.+..+++.|.|.+||.+..++++|.+
T Consensus 338 ~~Gy~l~~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 338 PDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 391 (791)
T ss_dssp CTTCEEETTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred CCCCccCCCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeee
Confidence 467765 1233577887 34578899999999999999999999988888864
No 74
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.16 E-value=0.075 Score=44.64 Aligned_cols=51 Identities=33% Similarity=0.797 Sum_probs=38.2
Q ss_pred CCCceE---ecccccccccCCCCCccceeecCCCceEEeccCCeEEccCCccccc
Q psy11864 65 KPGFSA---IFMKEFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICLD 116 (193)
Q Consensus 65 ~~GF~~---~~~~~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~~ 116 (193)
..||.+ .....+++|.. ...|.+.|.+..+++.|.|++||.+..++++|.+
T Consensus 320 ~~G~~~~~~~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 320 PDGFQLVAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 373 (699)
T ss_dssp CSSSCCCSSSCCCCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred CCCeEcCCCCcccCccccCC-CCccccccccCCCCeeeeeecccccCCCCCcccc
Confidence 356664 22335677753 3468889999999999999999999888888864
No 75
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.89 E-value=0.17 Score=42.52 Aligned_cols=39 Identities=36% Similarity=0.899 Sum_probs=32.0
Q ss_pred cccccCCCCCccceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 76 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 76 ~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
.++|...+..|.+.|.+..+++.|.|++||.+ .++..|.
T Consensus 294 ~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~ 332 (699)
T 1n7d_A 294 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCE 332 (699)
T ss_dssp CCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCC
T ss_pred cccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCccc
Confidence 45676666778899999999999999999998 5666664
No 76
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=91.65 E-value=0.17 Score=33.44 Aligned_cols=39 Identities=33% Similarity=0.783 Sum_probs=29.9
Q ss_pred ccccccCCCCCcc-ceeecCCCceEEeccCCeEEccCCcccc
Q psy11864 75 EFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 75 ~~~~c~~~~~~c~-~~c~~~~~~~~c~c~~g~~l~~~~~~C~ 115 (193)
++++|.. ..|. ..|.+..+++.|.|++||.+...+..|.
T Consensus 3 dideC~~--~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~ 42 (147)
T 2w86_A 3 DIDECES--SPCINGVCKNSPGSFICECSSESTLDPTKTICI 42 (147)
T ss_dssp CCCGGGG--CCSBTSEEEEETTEEEEECCTTEEECTTSSBEE
T ss_pred cCccCcC--CCCCCCEeECCCCCEEeECCCCcccCCCCCeec
Confidence 4567764 2465 3899999999999999999877666664
No 77
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=89.94 E-value=0.31 Score=30.98 Aligned_cols=42 Identities=26% Similarity=0.654 Sum_probs=29.5
Q ss_pred ccccccCCCCCccceeecC-CCceEEeccCCeEEccC-CcccccCC
Q psy11864 75 EFDECALEDHGCEHTCKNI-LGGYECSCKIGYELHSD-GKICLDAC 118 (193)
Q Consensus 75 ~~~~c~~~~~~c~~~c~~~-~~~~~c~c~~g~~l~~~-~~~C~~~C 118 (193)
.+++|. ...|.+.|.+. .+++.|.|++||.+... ...|...|
T Consensus 3 dideC~--~~pC~~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C 46 (118)
T 1dx5_I 3 PVDPCF--RANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFC 46 (118)
T ss_dssp CCCGGG--GCCCSSEEEECSSSCEEEECCTTEEEETTEEEEEEECC
T ss_pred ccccCC--CCCCCCCCCCCCCCCEEeECCCCccccCCCCCcccccc
Confidence 356674 34677899999 89999999999987643 22344434
No 78
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=89.84 E-value=0.2 Score=27.96 Aligned_cols=30 Identities=37% Similarity=0.866 Sum_probs=22.5
Q ss_pred ccccccCCCCCcc----ceeecCCCceEEeccCCeE
Q psy11864 75 EFDECALEDHGCE----HTCKNILGGYECSCKIGYE 106 (193)
Q Consensus 75 ~~~~c~~~~~~c~----~~c~~~~~~~~c~c~~g~~ 106 (193)
..++|... .|. .+|.+..+++.|.|++||.
T Consensus 10 ~~d~C~sn--PC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 10 TPAACSSN--PCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp SCCHHHHC--SSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred CCCcCcCC--CCcCCCccccccCCCceEeECCCCCc
Confidence 34566532 343 4799999999999999997
No 79
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=88.94 E-value=0.61 Score=30.52 Aligned_cols=37 Identities=38% Similarity=0.816 Sum_probs=27.6
Q ss_pred cccccccCCC-CCcc--ceeecCCCceEEeccCCeEEccC
Q psy11864 74 KEFDECALED-HGCE--HTCKNILGGYECSCKIGYELHSD 110 (193)
Q Consensus 74 ~~~~~c~~~~-~~c~--~~c~~~~~~~~c~c~~g~~l~~~ 110 (193)
..+++|.... ..|. ..|.+..+++.|.|++||.+...
T Consensus 42 ~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 42 DDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp EECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred CccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 3567787653 2565 58999999999999999998654
No 80
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=88.05 E-value=1.2 Score=29.45 Aligned_cols=30 Identities=37% Similarity=0.956 Sum_probs=22.0
Q ss_pred ccccccCCCCCcc--ceeecCCCceEEeccCCeE
Q psy11864 75 EFDECALEDHGCE--HTCKNILGGYECSCKIGYE 106 (193)
Q Consensus 75 ~~~~c~~~~~~c~--~~c~~~~~~~~c~c~~g~~ 106 (193)
++++|... .|. .+|.+..+++.|.|++||.
T Consensus 47 dideC~~~--pC~n~g~C~~~~~~y~C~C~~G~~ 78 (146)
T 1x7a_L 47 DGDQCEPN--PCLNGGLCKDDINSYECWCQVGFE 78 (146)
T ss_dssp ---CCSSC--SSCTTCEEEECSSCEEEECCSSEE
T ss_pred CcCcCCCC--CCCCCCEeECCCCCEEEecCCCCc
Confidence 56777643 454 4899999999999999997
No 81
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=86.41 E-value=0.54 Score=30.69 Aligned_cols=43 Identities=23% Similarity=0.607 Sum_probs=31.2
Q ss_pred CCCceEeccc-ccccccCCCCCccceeecCCCceEEeccCCeEE
Q psy11864 65 KPGFSAIFMK-EFDECALEDHGCEHTCKNILGGYECSCKIGYEL 107 (193)
Q Consensus 65 ~~GF~~~~~~-~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l 107 (193)
..||...... .+++|..........|.+..+++.|.|++||..
T Consensus 85 ~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 128 (143)
T 4d90_A 85 PRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMG 128 (143)
T ss_dssp CTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBS
T ss_pred cCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCcc
Confidence 4677665554 667776443333458999999999999999974
No 82
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=85.37 E-value=0.97 Score=29.28 Aligned_cols=33 Identities=48% Similarity=1.098 Sum_probs=22.7
Q ss_pred ccccccCCCCCccc--eeecCCCceEEeccCCeEE
Q psy11864 75 EFDECALEDHGCEH--TCKNILGGYECSCKIGYEL 107 (193)
Q Consensus 75 ~~~~c~~~~~~c~~--~c~~~~~~~~c~c~~g~~l 107 (193)
++++|......|.. .|.+..+++.|.|++||..
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G 38 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTG 38 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcC
Confidence 35666655555654 6888888888888888863
No 83
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=84.86 E-value=1 Score=23.99 Aligned_cols=30 Identities=37% Similarity=0.857 Sum_probs=21.1
Q ss_pred ccccCC-CCCcc--ceee--cCCCceEEeccCCeE
Q psy11864 77 DECALE-DHGCE--HTCK--NILGGYECSCKIGYE 106 (193)
Q Consensus 77 ~~c~~~-~~~c~--~~c~--~~~~~~~c~c~~g~~ 106 (193)
++|... ...|. .+|. +..+++.|.|++||.
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~ 38 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS 38 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc
Confidence 455442 22454 3788 788899999999996
No 84
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=84.79 E-value=0.99 Score=30.96 Aligned_cols=45 Identities=29% Similarity=0.649 Sum_probs=33.5
Q ss_pred CCCceEe---cccccccccCC--CCCcc--ceeecCC-----CceEEeccCCeEEcc
Q psy11864 65 KPGFSAI---FMKEFDECALE--DHGCE--HTCKNIL-----GGYECSCKIGYELHS 109 (193)
Q Consensus 65 ~~GF~~~---~~~~~~~c~~~--~~~c~--~~c~~~~-----~~~~c~c~~g~~l~~ 109 (193)
..||... ....+++|... ...|. ..|.+.. +++.|.|.+||....
T Consensus 30 ~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~ 86 (186)
T 1z1y_A 30 NEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE 86 (186)
T ss_dssp CTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred CCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC
Confidence 4677765 44466788754 44576 4799998 899999999998754
No 85
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=84.50 E-value=1.2 Score=24.10 Aligned_cols=32 Identities=16% Similarity=0.142 Sum_probs=19.2
Q ss_pred cccccCCCCCcccee-----ecCCCceEEeccCCeEE
Q psy11864 76 FDECALEDHGCEHTC-----KNILGGYECSCKIGYEL 107 (193)
Q Consensus 76 ~~~c~~~~~~c~~~c-----~~~~~~~~c~c~~g~~l 107 (193)
.++|....-.-..+| ....+.+.|.|++||..
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G 44 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTG 44 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEES
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcC
Confidence 355544322223467 35667899999999973
No 86
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=83.29 E-value=1.9 Score=21.99 Aligned_cols=19 Identities=37% Similarity=0.861 Sum_probs=15.8
Q ss_pred ceee--cCCCceEEeccCCeE
Q psy11864 88 HTCK--NILGGYECSCKIGYE 106 (193)
Q Consensus 88 ~~c~--~~~~~~~c~c~~g~~ 106 (193)
.+|. ...+++.|.|++||.
T Consensus 15 g~C~~~~~~~~~~C~C~~G~~ 35 (45)
T 1a3p_A 15 GVXMHIESLDSYTCNCVIGYS 35 (45)
T ss_dssp CEEEECTTTSSEEEECCTTEE
T ss_pred CEEEeecCCCCEEEEcCCCCc
Confidence 3676 677899999999996
No 87
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=82.76 E-value=1.1 Score=37.04 Aligned_cols=45 Identities=31% Similarity=0.625 Sum_probs=34.2
Q ss_pred CCCceE--ecccccccccCCCCCccc-----eeecCCCceEEe-ccCCeEEcc
Q psy11864 65 KPGFSA--IFMKEFDECALEDHGCEH-----TCKNILGGYECS-CKIGYELHS 109 (193)
Q Consensus 65 ~~GF~~--~~~~~~~~c~~~~~~c~~-----~c~~~~~~~~c~-c~~g~~l~~ 109 (193)
..||.. ..+..+++|......|.. .|.+..+++.|. |++||....
T Consensus 31 ~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~ 83 (634)
T 1yo8_A 31 PVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQ 83 (634)
T ss_dssp CTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECC
T ss_pred CCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCc
Confidence 356654 345567889776666865 799999999998 999998654
No 88
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=81.15 E-value=1.9 Score=27.85 Aligned_cols=43 Identities=26% Similarity=0.624 Sum_probs=28.9
Q ss_pred CCCceEeccc-ccccccCCCCCccceeecCCCceEEeccCCeEE
Q psy11864 65 KPGFSAIFMK-EFDECALEDHGCEHTCKNILGGYECSCKIGYEL 107 (193)
Q Consensus 65 ~~GF~~~~~~-~~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~l 107 (193)
..||...... ..++|....-.....|.+..+++.|.|.+||..
T Consensus 33 ~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 76 (135)
T 2vj3_A 33 LQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEG 76 (135)
T ss_dssp CTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEES
T ss_pred CCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcC
Confidence 3566554432 456676433333458999999999999999973
No 89
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=81.09 E-value=3.4 Score=31.98 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=19.8
Q ss_pred CCCCceEecccccccccCCCCC------ccceeecCCCceEEeccCCeEEc
Q psy11864 64 QKPGFSAIFMKEFDECALEDHG------CEHTCKNILGGYECSCKIGYELH 108 (193)
Q Consensus 64 ~~~GF~~~~~~~~~~c~~~~~~------c~~~c~~~~~~~~c~c~~g~~l~ 108 (193)
.++||+++|......|..+... +...-.........+|.+||.|.
T Consensus 2 ~~~gw~~~~~c~~~~C~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~ 52 (403)
T 1zjk_A 2 SMTGWKIHYTSTAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELL 52 (403)
T ss_dssp -----------CCCCBCCCCCCTTEEESSCCSCBCTTCEEEEEECTTEEEE
T ss_pred CCCceEEEEEECCccCcCCCCCCCceEcccCCccccCCEEEEEeCCCCEEc
Confidence 3579999998877788765321 11111223345678899999984
No 90
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=80.59 E-value=2 Score=35.70 Aligned_cols=39 Identities=33% Similarity=0.749 Sum_probs=30.0
Q ss_pred ccccccCCCCCcc--ceeecCC----CceEEeccCCeEEccCCcccc
Q psy11864 75 EFDECALEDHGCE--HTCKNIL----GGYECSCKIGYELHSDGKICL 115 (193)
Q Consensus 75 ~~~~c~~~~~~c~--~~c~~~~----~~~~c~c~~g~~l~~~~~~C~ 115 (193)
.+++|......|. ..|.+.. +++.|.|++||.. ++..|.
T Consensus 101 dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce 145 (634)
T 1yo8_A 101 PENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICG 145 (634)
T ss_dssp ECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEE
T ss_pred ccccccCCCcccccCccccccccccccceeeeccCCccc--cCcccc
Confidence 4677876666786 5899988 9999999999974 445564
No 91
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=77.05 E-value=1.8 Score=27.11 Aligned_cols=21 Identities=33% Similarity=0.923 Sum_probs=18.0
Q ss_pred ceeecCCCceEEeccCCeEEc
Q psy11864 88 HTCKNILGGYECSCKIGYELH 108 (193)
Q Consensus 88 ~~c~~~~~~~~c~c~~g~~l~ 108 (193)
.+|.+..+++.|.|++||...
T Consensus 26 g~C~~~~~~y~C~C~~G~~G~ 46 (114)
T 1aut_L 26 GTCIDGIGSFSCDCRSGWEGR 46 (114)
T ss_dssp EEECCCSSCCCEEECTTEEST
T ss_pred CCCCCCCCCcEeeCCCCCcCC
Confidence 478899999999999999743
No 92
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=76.55 E-value=2.2 Score=29.22 Aligned_cols=32 Identities=31% Similarity=0.931 Sum_probs=24.9
Q ss_pred ccccCCCCCc---cceeecCCCceEEeccCCeEEccCC
Q psy11864 77 DECALEDHGC---EHTCKNILGGYECSCKIGYELHSDG 111 (193)
Q Consensus 77 ~~c~~~~~~c---~~~c~~~~~~~~c~c~~g~~l~~~~ 111 (193)
++|.. .| ...|.+..+++.|.|++||.+....
T Consensus 140 ~~C~~---~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 140 TACQL---XCNTDNEVCXNVEGVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp CCCCC---CCCTTTEEEEEETTEEEEEECTTCEEETTT
T ss_pred Ccccc---cccccCcceecCCCCeeeECCCCCccCccc
Confidence 56652 56 4589999999999999999876543
No 93
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=74.98 E-value=2.2 Score=22.01 Aligned_cols=18 Identities=28% Similarity=0.912 Sum_probs=14.3
Q ss_pred eeecCC--CceEEeccCCeE
Q psy11864 89 TCKNIL--GGYECSCKIGYE 106 (193)
Q Consensus 89 ~c~~~~--~~~~c~c~~g~~ 106 (193)
+|.... +++.|.|++||+
T Consensus 18 ~C~~~~~~~~~~C~C~~Gyt 37 (46)
T 1k36_A 18 QCIYLVDMSQNYCRCEVGYT 37 (46)
T ss_dssp EEEEETTTTEEEEEECTTCS
T ss_pred EeeccCCCCCEEEECCCCCc
Confidence 676543 689999999996
No 94
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=73.59 E-value=2.8 Score=27.39 Aligned_cols=30 Identities=37% Similarity=0.866 Sum_probs=23.6
Q ss_pred ccccccCCCCCccc--eeecCCCceEEeccCCeE
Q psy11864 75 EFDECALEDHGCEH--TCKNILGGYECSCKIGYE 106 (193)
Q Consensus 75 ~~~~c~~~~~~c~~--~c~~~~~~~~c~c~~g~~ 106 (193)
.+++|.. ..|.+ +|.+..+++.|.|++||.
T Consensus 46 did~C~~--~pC~n~g~C~~~~g~y~C~C~~G~~ 77 (142)
T 2c4f_L 46 DGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFE 77 (142)
T ss_dssp TCCGGGG--CCCCTTCEEEEETTEEEEECCTTEE
T ss_pred ccCcCcC--CCcCCCCEEeCCCCCEEeeCCCCcc
Confidence 4566763 34654 899999999999999997
No 95
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=70.47 E-value=2.9 Score=23.02 Aligned_cols=19 Identities=26% Similarity=0.656 Sum_probs=15.3
Q ss_pred ceeec-----CCCceEEeccCCeE
Q psy11864 88 HTCKN-----ILGGYECSCKIGYE 106 (193)
Q Consensus 88 ~~c~~-----~~~~~~c~c~~g~~ 106 (193)
.+|.. ..+++.|.|++||.
T Consensus 18 G~C~~~~~~~~~~~y~C~C~~Gf~ 41 (63)
T 1hae_A 18 GECFMVKDLSNPSRYLCKCQPGFT 41 (63)
T ss_dssp CEEEEEESSSSSCCEEEECCTTEE
T ss_pred cEEecCCccCCCCCEEEECCCCCc
Confidence 36765 56789999999997
No 96
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=68.96 E-value=3.6 Score=21.89 Aligned_cols=19 Identities=37% Similarity=0.940 Sum_probs=15.5
Q ss_pred eee--cCCCceEEeccCCeEE
Q psy11864 89 TCK--NILGGYECSCKIGYEL 107 (193)
Q Consensus 89 ~c~--~~~~~~~c~c~~g~~l 107 (193)
+|. ...+++.|.|++||+.
T Consensus 19 ~C~~~~~~~~~~C~C~~GytG 39 (53)
T 1nql_B 19 VCMYIEALDKYACNCVVGYIG 39 (53)
T ss_dssp EEEEETTTTEEEEEECTTEES
T ss_pred EEeeecCCCCEEEecCCCCcC
Confidence 676 5677899999999974
No 97
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=66.67 E-value=1.2 Score=31.10 Aligned_cols=31 Identities=39% Similarity=0.938 Sum_probs=0.0
Q ss_pred ccccccCCCCCccc--eeecCCCceEEeccCCeEE
Q psy11864 75 EFDECALEDHGCEH--TCKNILGGYECSCKIGYEL 107 (193)
Q Consensus 75 ~~~~c~~~~~~c~~--~c~~~~~~~~c~c~~g~~l 107 (193)
..++|.. ..|.+ .|.+..+++.|.|++||..
T Consensus 41 dideC~~--~pC~ngg~C~n~~g~y~C~C~~Gf~G 73 (195)
T 1nfu_B 41 DGDQCET--SPCQNQGKCKDGLGEYTCTCLEGFEG 73 (195)
T ss_dssp -----------------------------------
T ss_pred CCcccCC--CCCCCCCEeECCCCCeeEeCCCCcee
Confidence 5677764 34554 7999999999999999973
No 98
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=66.59 E-value=4.2 Score=26.89 Aligned_cols=20 Identities=35% Similarity=0.846 Sum_probs=18.0
Q ss_pred ceeecCCCceEEeccCCeEE
Q psy11864 88 HTCKNILGGYECSCKIGYEL 107 (193)
Q Consensus 88 ~~c~~~~~~~~c~c~~g~~l 107 (193)
..|.+..+++.|.|.+||..
T Consensus 131 g~C~~~~~~~~c~C~~g~~G 150 (162)
T 1g1s_A 131 GECLETIGNYTCSCYPGFYG 150 (162)
T ss_dssp EEEEECSSSEEEEECTTEES
T ss_pred CEEecCCCCceEeCCCCCcC
Confidence 47999999999999999984
No 99
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=66.16 E-value=4 Score=30.40 Aligned_cols=31 Identities=29% Similarity=0.698 Sum_probs=21.2
Q ss_pred cccccCCCCCccceeecCCCceEEeccCCeE
Q psy11864 76 FDECALEDHGCEHTCKNILGGYECSCKIGYE 106 (193)
Q Consensus 76 ~~~c~~~~~~c~~~c~~~~~~~~c~c~~g~~ 106 (193)
.++|......-...|.+..+++.|.|++||.
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~ 35 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYE 35 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCC
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCc
Confidence 4566543322224688888999999999996
No 100
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=65.25 E-value=5.2 Score=23.84 Aligned_cols=30 Identities=27% Similarity=0.772 Sum_probs=21.8
Q ss_pred ccccccCCCCCcc--ceeecCC--CceEEeccCCeE
Q psy11864 75 EFDECALEDHGCE--HTCKNIL--GGYECSCKIGYE 106 (193)
Q Consensus 75 ~~~~c~~~~~~c~--~~c~~~~--~~~~c~c~~g~~ 106 (193)
..++|... .|. .+|.+.. +++.|.|++||.
T Consensus 47 ~~~~C~~~--pC~ngg~C~~~~~~~~~~C~C~~G~~ 80 (91)
T 1tpg_A 47 PVKSCSEP--RCFNGGTCQQALYFSDFVCQCPEGFA 80 (91)
T ss_dssp CEEECSSC--CSCTTCEEEEESSSSCEEEECCTTCB
T ss_pred cCCcccCC--CCCCCCEeecCCCCCCeEeECCCCCc
Confidence 35667543 354 4788877 899999999995
No 101
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.79 E-value=13 Score=20.81 Aligned_cols=13 Identities=23% Similarity=0.539 Sum_probs=7.3
Q ss_pred eEEeccCCeEEcc
Q psy11864 97 YECSCKIGYELHS 109 (193)
Q Consensus 97 ~~c~c~~g~~l~~ 109 (193)
....|.+||.|..
T Consensus 36 v~f~C~~Gy~L~G 48 (73)
T 2ehf_A 36 LTFECPAAFELVG 48 (73)
T ss_dssp EEEECCSSCCBCS
T ss_pred EEEEcCCCCEEeC
Confidence 3455666666553
No 102
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=44.29 E-value=11 Score=19.76 Aligned_cols=14 Identities=43% Similarity=0.933 Sum_probs=11.6
Q ss_pred CCceEEeccCCeEE
Q psy11864 94 LGGYECSCKIGYEL 107 (193)
Q Consensus 94 ~~~~~c~c~~g~~l 107 (193)
.+++.|.|++||..
T Consensus 30 ~~~y~C~C~~Gf~G 43 (52)
T 3ca7_A 30 LPVYSCECAIGFMG 43 (52)
T ss_dssp EEEEEEECCTTEES
T ss_pred CCCEEEECCCCCcC
Confidence 45789999999973
No 103
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=39.67 E-value=22 Score=28.96 Aligned_cols=32 Identities=25% Similarity=0.591 Sum_probs=22.3
Q ss_pred ccccCCCCCccceeec-CCCceEEecc-CCeEEc
Q psy11864 77 DECALEDHGCEHTCKN-ILGGYECSCK-IGYELH 108 (193)
Q Consensus 77 ~~c~~~~~~c~~~c~~-~~~~~~c~c~-~g~~l~ 108 (193)
++|......-..+|.. ..+++.|.|. +||...
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~ 36 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP 36 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCC
Confidence 4555433222347988 8899999999 999843
No 104
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=32.28 E-value=20 Score=19.27 Aligned_cols=15 Identities=40% Similarity=0.787 Sum_probs=11.7
Q ss_pred CCCceEEeccCCeEE
Q psy11864 93 ILGGYECSCKIGYEL 107 (193)
Q Consensus 93 ~~~~~~c~c~~g~~l 107 (193)
..+.+.|.|++||..
T Consensus 29 ~~~~~~C~C~~Gf~G 43 (58)
T 3ltf_D 29 DLPVYSCECAIGFMG 43 (58)
T ss_dssp TEEEEEEEECTTEES
T ss_pred CCCCEEeECCCCCcc
Confidence 345678999999973
No 105
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=31.63 E-value=35 Score=28.06 Aligned_cols=31 Identities=19% Similarity=0.547 Sum_probs=20.5
Q ss_pred ccccCCCCCccceeec-CCCceEEecc-CCeEE
Q psy11864 77 DECALEDHGCEHTCKN-ILGGYECSCK-IGYEL 107 (193)
Q Consensus 77 ~~c~~~~~~c~~~c~~-~~~~~~c~c~-~g~~l 107 (193)
++|......-..+|.. ..+++.|.|+ +||..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G 34 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYG 34 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEET
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccC
Confidence 4555433222347885 4589999999 99974
No 106
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=29.85 E-value=24 Score=23.51 Aligned_cols=12 Identities=17% Similarity=0.794 Sum_probs=6.3
Q ss_pred CceEEeccCCeE
Q psy11864 95 GGYECSCKIGYE 106 (193)
Q Consensus 95 ~~~~c~c~~g~~ 106 (193)
+.+.|.|.+||.
T Consensus 112 ~~~~C~C~~G~~ 123 (169)
T 2vj2_A 112 EPWQCLCETNWG 123 (169)
T ss_dssp STTCCEECTTEE
T ss_pred CCCEEeCCCCCC
Confidence 345555555554
No 107
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=28.65 E-value=26 Score=24.17 Aligned_cols=22 Identities=27% Similarity=0.628 Sum_probs=15.9
Q ss_pred CccceeecCC---CceEEeccCCeE
Q psy11864 85 GCEHTCKNIL---GGYECSCKIGYE 106 (193)
Q Consensus 85 ~c~~~c~~~~---~~~~c~c~~g~~ 106 (193)
.|...|.+.+ +...|.|++||.
T Consensus 150 ~C~~~C~ngG~Cv~P~~C~C~~Gw~ 174 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERRICECPDGFH 174 (188)
T ss_dssp CCTTCCCTTCEECTTSCEECCTTCB
T ss_pred ccCCCCCCCCEeCCCCcccCcCCCC
Confidence 5666776653 345799999997
No 108
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=25.89 E-value=45 Score=21.74 Aligned_cols=21 Identities=33% Similarity=0.947 Sum_probs=18.0
Q ss_pred cceeecCCCceEEeccCCeEE
Q psy11864 87 EHTCKNILGGYECSCKIGYEL 107 (193)
Q Consensus 87 ~~~c~~~~~~~~c~c~~g~~l 107 (193)
...|....+++.|.|.+||..
T Consensus 130 ~g~C~~~~~~~~c~C~~g~~g 150 (164)
T 3cfw_A 130 HGECVEIINNYTCNCDVGYYG 150 (164)
T ss_dssp SEEEEEETTEEEEEECTTCBS
T ss_pred CCeecccCCCceeeeCCCccc
Confidence 458888899999999999874
No 109
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=25.01 E-value=43 Score=21.57 Aligned_cols=19 Identities=26% Similarity=0.926 Sum_probs=17.1
Q ss_pred ceeecCCCceEEeccCCeE
Q psy11864 88 HTCKNILGGYECSCKIGYE 106 (193)
Q Consensus 88 ~~c~~~~~~~~c~c~~g~~ 106 (193)
..|......+.|.|.+||.
T Consensus 131 g~C~~~~~~~~c~C~~g~~ 149 (157)
T 1g1t_A 131 GECVETINNYTCKCDPGFS 149 (157)
T ss_dssp EEEEEETTEEEEEECTTEE
T ss_pred CEeecCCCCeeEECCCCcc
Confidence 4788889999999999998
No 110
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=22.10 E-value=55 Score=16.94 Aligned_cols=16 Identities=25% Similarity=0.341 Sum_probs=12.2
Q ss_pred cCCCceEEeccCCeEE
Q psy11864 92 NILGGYECSCKIGYEL 107 (193)
Q Consensus 92 ~~~~~~~c~c~~g~~l 107 (193)
...+.+.|.|++||..
T Consensus 25 ~~~~~~~C~C~~gy~G 40 (50)
T 1iox_A 25 VAEQTPSCVCDEGYIG 40 (50)
T ss_dssp TTTTEEEECCCTTEET
T ss_pred cCCCCeEEECCCCccc
Confidence 3456688999999973
No 111
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=20.07 E-value=53 Score=17.08 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=11.7
Q ss_pred CCCceEEeccCCeEE
Q psy11864 93 ILGGYECSCKIGYEL 107 (193)
Q Consensus 93 ~~~~~~c~c~~g~~l 107 (193)
..+.+.|.|++||..
T Consensus 26 ~~~~~~C~C~~gy~G 40 (50)
T 3e50_C 26 QEDKPACVCHSGYVG 40 (50)
T ss_pred CCCCeEEECCCCCcc
Confidence 345789999999974
No 112
>3sbt_A PRE-mRNA-splicing factor 8; rnaseh like domain, VHS like domain, U5 snRNP assembly; 1.80A {Saccharomyces cerevisiae} SCOP: c.55.3.14 PDB: 3e66_A 3e9o_A* 3e9p_A
Probab=20.06 E-value=99 Score=22.10 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=25.6
Q ss_pred CCccCCCCCCCCCCCCceEEEEEcCCCCeEEEEEe
Q psy11864 127 GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFT 161 (193)
Q Consensus 127 g~i~Sp~~p~~y~~~~~C~w~I~~~~~~~i~l~F~ 161 (193)
|.+.|.||...+.+.. .|.+.-..-+||.++=.
T Consensus 1 ~~l~s~ny~eLF~n~~--~wfvDDtnvYrvt~hkT 33 (260)
T 3sbt_A 1 GAMNSSNYAELFNNDI--KLFVDDTNVYRVTVHKT 33 (260)
T ss_dssp -CBCTTSGGGGGSSSC--EEEEECTTTSEEEEEEC
T ss_pred CccccccHHHHhcCce--EEEEeCCcEEEEEEEec
Confidence 5677888888877665 99999888998887643
Done!