Your job contains 1 sequence.
>psy11867
MTSLSDWIAATKNTSALKPDDLIDVLSNVNLKQADTPSPTEDAKPAPSSPDSSAPGNKDE
EDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYE
MGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLA
PTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYR
FFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMV
PNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWL
AEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKIYS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11867
(399 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0024804 - symbol:Dbp80 "Dead box protein 80" speci... 1150 1.0e-116 1
UNIPROTKB|Q5ZMC1 - symbol:DDX19B "Uncharacterized protein... 1148 1.6e-116 1
UNIPROTKB|E9PTL9 - symbol:Ddx19b "Protein Ddx19b" species... 1147 2.1e-116 1
UNIPROTKB|Q9NUU7 - symbol:DDX19A "ATP-dependent RNA helic... 1145 3.4e-116 1
UNIPROTKB|F1S432 - symbol:DDX19B "Uncharacterized protein... 1144 4.4e-116 1
UNIPROTKB|F1MUT6 - symbol:DDX19B "Uncharacterized protein... 1142 7.1e-116 1
UNIPROTKB|I3LC00 - symbol:DDX19A "Uncharacterized protein... 1142 7.1e-116 1
UNIPROTKB|E2RR50 - symbol:DDX19A "Uncharacterized protein... 1141 9.1e-116 1
UNIPROTKB|H3BQK0 - symbol:DDX19B "HCG1998531, isoform CRA... 1141 9.1e-116 1
UNIPROTKB|Q9UMR2 - symbol:DDX19B "ATP-dependent RNA helic... 1141 9.1e-116 1
UNIPROTKB|Q3ZBV2 - symbol:DDX19A "ATP-dependent RNA helic... 1139 1.5e-115 1
MGI|MGI:99526 - symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box... 1139 1.5e-115 1
RGD|1303136 - symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box p... 1138 1.9e-115 1
RGD|1593382 - symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box po... 1138 1.9e-115 1
ZFIN|ZDB-GENE-080721-12 - symbol:zgc:193690 "zgc:193690" ... 1110 1.8e-112 1
UNIPROTKB|Q58DE5 - symbol:DDX19L "ATP-dependent RNA helic... 1099 2.6e-111 1
ZFIN|ZDB-GENE-020419-30 - symbol:ddx19 "DEAD/H (Asp-Glu-A... 1097 4.2e-111 1
MGI|MGI:1353582 - symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) bo... 1072 1.9e-108 1
UNIPROTKB|F1PIZ6 - symbol:DDX25 "Uncharacterized protein"... 1071 2.4e-108 1
UNIPROTKB|Q2TBP1 - symbol:DDX25 "ATP-dependent RNA helica... 1069 3.9e-108 1
RGD|68381 - symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box heli... 1069 3.9e-108 1
UNIPROTKB|J3QL17 - symbol:DDX25 "ATP-dependent RNA helica... 1067 6.3e-108 1
UNIPROTKB|Q9UHL0 - symbol:DDX25 "ATP-dependent RNA helica... 1067 6.3e-108 1
UNIPROTKB|F1MSI6 - symbol:DDX25 "ATP-dependent RNA helica... 1066 8.1e-108 1
UNIPROTKB|F1RVF0 - symbol:LOC100512980 "Uncharacterized p... 1051 3.1e-106 1
UNIPROTKB|B4DRZ7 - symbol:DDX19A "ATP-dependent RNA helic... 1016 1.6e-102 1
UNIPROTKB|I3L352 - symbol:DDX19A "ATP-dependent RNA helic... 1016 1.6e-102 1
UNIPROTKB|I3L0H8 - symbol:DDX19A "ATP-dependent RNA helic... 900 3.2e-102 2
UNIPROTKB|Q9DGP9 - symbol:deadsouth "ATP-dependent RNA he... 975 3.5e-98 1
UNIPROTKB|E9PR46 - symbol:DDX25 "ATP-dependent RNA helica... 508 9.8e-97 2
UNIPROTKB|H9KYU4 - symbol:DDX25 "Uncharacterized protein"... 943 8.7e-95 1
UNIPROTKB|F1S758 - symbol:LOC100523329 "Uncharacterized p... 911 2.1e-91 1
UNIPROTKB|J9NSS1 - symbol:DDX25 "Uncharacterized protein"... 885 1.2e-88 1
WB|WBGene00011580 - symbol:ddx-19 species:6239 "Caenorhab... 821 7.4e-82 1
POMBASE|SPBC12C2.06 - symbol:SPBC12C2.06 "cytoplasmic ATP... 780 1.6e-77 1
SGD|S000005572 - symbol:DBP5 "Cytoplasmic ATP-dependent R... 777 3.4e-77 1
CGD|CAL0000067 - symbol:DBP5 species:5476 "Candida albica... 763 1.0e-75 1
UNIPROTKB|H3BN59 - symbol:H3BN59 "Uncharacterized protein... 710 4.3e-70 1
DICTYBASE|DDB_G0281553 - symbol:helC "DEAD-box RNA helica... 686 1.5e-67 1
UNIPROTKB|H3BMQ5 - symbol:DDX19B "ATP-dependent RNA helic... 644 4.2e-63 1
UNIPROTKB|I3LMM7 - symbol:I3LMM7 "Uncharacterized protein... 637 2.3e-62 1
ASPGD|ASPL0000065093 - symbol:AN7659 species:162425 "Emer... 633 6.2e-62 1
UNIPROTKB|I3LMJ8 - symbol:I3LMJ8 "Uncharacterized protein... 616 3.9e-60 1
UNIPROTKB|Q5ZMA1 - symbol:DDX19B "Uncharacterized protein... 603 9.3e-59 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 564 1.3e-54 1
TAIR|locus:2101993 - symbol:LOS4 "LOW EXPRESSION OF OSMOT... 552 2.4e-53 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 524 2.2e-50 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 512 4.1e-49 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 503 3.7e-48 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 503 3.7e-48 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 502 4.7e-48 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 502 4.7e-48 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 502 4.7e-48 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 502 4.7e-48 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 502 4.7e-48 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 502 4.7e-48 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 500 7.7e-48 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 495 2.6e-47 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 493 4.2e-47 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 492 5.4e-47 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 492 5.4e-47 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 492 5.4e-47 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 492 5.4e-47 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 492 5.4e-47 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 492 5.4e-47 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 488 1.4e-46 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 483 4.8e-46 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 483 4.8e-46 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 483 4.8e-46 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 482 6.2e-46 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 481 7.9e-46 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 480 1.0e-45 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 480 1.0e-45 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 480 1.0e-45 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 480 1.0e-45 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 480 1.0e-45 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 480 1.0e-45 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 480 1.0e-45 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 480 1.0e-45 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 477 2.1e-45 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 477 2.1e-45 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 477 2.1e-45 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 477 2.1e-45 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 477 2.1e-45 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 477 2.1e-45 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 477 2.1e-45 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 477 2.1e-45 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 474 4.4e-45 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 469 1.5e-44 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 469 1.5e-44 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 467 2.4e-44 1
GENEDB_PFALCIPARUM|PF14_0563 - symbol:PF14_0563 "DEAD-box... 468 6.0e-44 1
UNIPROTKB|Q8IKP1 - symbol:PF14_0563 "DEAD box helicase, p... 468 6.0e-44 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 460 1.3e-43 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 452 9.3e-43 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 450 1.5e-42 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 445 5.2e-42 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 445 5.2e-42 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 445 5.2e-42 1
UNIPROTKB|J9PAF3 - symbol:J9PAF3 "Uncharacterized protein... 443 8.4e-42 1
WARNING: Descriptions of 738 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0024804 [details] [associations]
symbol:Dbp80 "Dead box protein 80" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0044614 "nuclear pore
cytoplasmic filaments" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AF005239 ProteinModelPortal:O61305 SMR:O61305 PaxDb:O61305
PRIDE:O61305 FlyBase:FBgn0024804 InParanoid:O61305
OrthoDB:EOG4BCC38 Bgee:O61305 GermOnline:CG17023 Uniprot:O61305
Length = 460
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 218/330 (66%), Positives = 271/330 (82%)
Query: 68 AEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPS 127
AE SLL KI+ +GL+ +K L++Q+K+P+SPL+SVKTFEALHLK LLKG+Y MGF PS
Sbjct: 38 AETSLLIKILGKGLVNTKLSLDLQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPS 97
Query: 128 KIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAI 187
KIQETALPTLLADPP NMIAQSQSGTGKTAAF L MLSRVN + PQVLCL+PTYELAI
Sbjct: 98 KIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAI 157
Query: 188 QIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKI 247
Q GEV A+MG+ ++ +R+AVRGE ++R+KKI E I+IGTPGK+LDWG+K+R FD+ KI
Sbjct: 158 QTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKI 217
Query: 248 KVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIK 307
VFVLDEADVMIATQGH D IRI K L CQ++ FSATY KEVM+FA+ +V +P II+
Sbjct: 218 SVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIR 277
Query: 308 LKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKE 367
L REEESL+NIKQ+YV CKN + K+ A+ NIYG +++GQA+IFCHT++TAAWLA KM+ +
Sbjct: 278 LMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSD 337
Query: 368 GLNVGLLSGELTVEQRLSILDRFREGEFKI 397
G +V +L+G+LTV QRL +LDRFR G K+
Sbjct: 338 GHSVAVLTGDLTVVQRLDVLDRFRSGLEKV 367
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 222/372 (59%), Positives = 284/372 (76%)
Query: 26 LSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIESK 85
LS + LK+ + P ++++ED+ A +SLL K++R L+++
Sbjct: 20 LSTLQLKE-EKAKPDANGAVPKADDNVERTEDEEKEDR----AAQSLLNKLIRSNLVDTT 74
Query: 86 QELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNM 145
++E+ ++DP+SPLYSVK+FE LHLKP+LL+GVY MGF PSKIQE ALP +LA+PP N+
Sbjct: 75 NQVEVLQRDPNSPLYSVKSFEELHLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNL 134
Query: 146 IAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
IAQSQSGTGKTAAF L MLSRV P + PQ LCL+PTYELA+Q G+V+ +MGK +L +
Sbjct: 135 IAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKL 194
Query: 206 RYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
YAVRG LER +KI+EQI+IGTPG VLDW K +F D KIKVFVLDEADVMIATQGHQ
Sbjct: 195 AYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 254
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC 325
D SIRIQ+ LP DCQ++LFSAT++ V +FAQ +VP+P IIKLKREEE+LD IKQ+YV+C
Sbjct: 255 DQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLC 314
Query: 326 KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLS 385
+ DEKF A+ NIYG +TI QAM+FCHTRKTA WLA ++SKEG V LLSGE+ VEQR +
Sbjct: 315 NSRDEKFRALCNIYGAITIAQAMVFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAA 374
Query: 386 ILDRFREGEFKI 397
+++RFREG+ K+
Sbjct: 375 VIERFREGKEKV 386
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 222/372 (59%), Positives = 285/372 (76%)
Query: 26 LSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIESK 85
LSN++LK+ + P + K EED+ A +SLL K++R L+++
Sbjct: 20 LSNLHLKE-EKIKP-DANGDQGAVVKTSANTEKTEEDEKEDRAAQSLLNKLIRSNLVDNT 77
Query: 86 QELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNM 145
++E+ ++DP SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+PP N+
Sbjct: 78 NQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNL 137
Query: 146 IAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
IAQSQSGTGKTAAF L MLSRV P+ + PQ LCL+PTYELA+Q G+V+ +MGK +L +
Sbjct: 138 IAQSQSGTGKTAAFVLAMLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKL 197
Query: 206 RYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
YAVRG LER +K+ EQI+IGTPG VLDW K +F D KIKVFVLDEADVMIATQGHQ
Sbjct: 198 AYAVRGNKLERGQKVGEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 257
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC 325
D SIRIQ+ LP +CQ++LFSAT++ V +FAQ +VP+P IIKLKREEE+LD IKQ+YV+C
Sbjct: 258 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLC 317
Query: 326 KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLS 385
N +EKF+A+ N+YG +TI QAMIFCHTRKTA+WLA ++SKEG V LLSGE+ VEQR +
Sbjct: 318 NNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAA 377
Query: 386 ILDRFREGEFKI 397
+++RFREG+ K+
Sbjct: 378 VIERFREGKEKV 389
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 217/339 (64%), Positives = 276/339 (81%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
DEE+K A+ SLL K++R L+++ ++E+ ++DP+SPLYSVK+FE L LKP+LL+GV
Sbjct: 48 DEEEKEDRAAQ-SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGV 106
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
Y MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV PS + PQ LC
Sbjct: 107 YAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLC 166
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLK 238
L+PTYELA+Q G+V+ +MGK +L + YAVRG LER +KI+EQI+IGTPG VLDW K
Sbjct: 167 LSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSK 226
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
+F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 227 LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQK 286
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
+VP+P +IKLKREEE+LD IKQ+YV+C + DEKF+A+ N+YG +TI QAMIFCHTRKTA+
Sbjct: 287 VVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTAS 346
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 347 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
Identities = 220/373 (58%), Positives = 285/373 (76%)
Query: 26 LSNVNLKQADT-PSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIES 84
LSN++LK P + +++ED+ A +SLL K++R L+++
Sbjct: 20 LSNLHLKDEKVKPDANDKGAVVKTNANAEKTDEEEKEDR----AAQSLLNKLIRSNLVDN 75
Query: 85 KQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHN 144
++E+ ++DP+SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+PP N
Sbjct: 76 TNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQN 135
Query: 145 MIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLS 204
+IAQSQSGTGKTAAF L MLS+V P+ + PQ LCL+PTYELA+Q G+V+ +MGK +L
Sbjct: 136 LIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGKVIEQMGKFYPELK 195
Query: 205 VRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGH 264
+ YAVRG LER +KI+E I+IGTPG VLDW K +F D KIKVFVLDEADVMIATQGH
Sbjct: 196 LAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGH 255
Query: 265 QDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVM 324
QD SIRIQ+ LP +CQ++LFSAT++ V +FAQ +VP+P IIKLKREEE+LD IKQ+YV+
Sbjct: 256 QDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVL 315
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
C N DEKF+A+ N+YG +TI QAMIFCHTRKTA+WLA ++SKEG V LLSGE+ VEQR
Sbjct: 316 CNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRA 375
Query: 385 SILDRFREGEFKI 397
++++RFREG+ K+
Sbjct: 376 AVIERFREGKEKV 388
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 220/372 (59%), Positives = 286/372 (76%)
Query: 26 LSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIESK 85
LSN++LK+ + P +++ED+ A +SLL K++R L+++
Sbjct: 25 LSNLHLKE-EKIKPDANGAVVKTNANAEKADEEEKEDR----AAQSLLNKLIRSNLVDNT 79
Query: 86 QELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNM 145
++E+ ++DP+SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+PP N+
Sbjct: 80 NQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNL 139
Query: 146 IAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
IAQSQSGTGKTAAF L MLS+V P+ + PQ LCL+PTYELA+Q G+V+ +MGK +L +
Sbjct: 140 IAQSQSGTGKTAAFVLAMLSQVEPANRHPQCLCLSPTYELALQTGKVIEQMGKFYPELKL 199
Query: 206 RYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
YAVRG LER +KI+E I+IGTPG VLDW K +F D KIKVFVLDEADVMIATQGHQ
Sbjct: 200 AYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 259
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC 325
D SIRIQ+ LP +CQ++LFSAT++ V +FAQ +VP+P IIKLKREEE+LD IKQ+YV+C
Sbjct: 260 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLC 319
Query: 326 KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLS 385
+ DEKF+A+ NIYG +TI QAMIFCHTRKTA+WLA ++SKEG V LLSGE+ VEQR +
Sbjct: 320 NSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAA 379
Query: 386 ILDRFREGEFKI 397
+++RFREG+ K+
Sbjct: 380 VIERFREGKEKV 391
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 217/339 (64%), Positives = 275/339 (81%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
DEE+K A+ SLL K++R L+++ ++E+ ++DP+SPLYSVK+FE L LKP+LL+GV
Sbjct: 48 DEEEKEDRAAQ-SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGV 106
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
Y MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ LC
Sbjct: 107 YAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLC 166
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLK 238
L+PTYELA+Q G+V+ +MGK +L + YAVRG LER +KI+E I+IGTPG VLDW K
Sbjct: 167 LSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSK 226
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
+F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 227 LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQK 286
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
+VP+P IIKLKREEE+LD IKQ+YV+C N DEKF+A+ N+YG +TI QAMIFCHTRKTA+
Sbjct: 287 VVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTAS 346
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 347 WLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKV 385
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 216/340 (63%), Positives = 275/340 (80%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
K EE++ A +SLL K++R L+++ ++E+ ++DP+SPLYSVK+FE L LKP+LL+G
Sbjct: 46 KAEEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQG 105
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
VY MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ L
Sbjct: 106 VYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCL 165
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CL+PTYELA+Q G+V+ +MGK +L + YAVRG LER +KI+E I+IGTPG VLDW
Sbjct: 166 CLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCS 225
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K +F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 226 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEDSVWKFAQ 285
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
+VP+P IIKLKREEE+LD IKQ+YV+C N DEKF+A+ N+YG +TI QAMIFCHTRKTA
Sbjct: 286 KVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 221/372 (59%), Positives = 285/372 (76%)
Query: 26 LSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIESK 85
LSN++LK+ T DEE+K A+ SLL K++R L+++
Sbjct: 25 LSNLHLKEEKIKPDTNGAVVKTNANAEKT----DEEEKEDRAAQ-SLLNKLIRSNLVDNT 79
Query: 86 QELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNM 145
++E+ ++DP+SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+PP N+
Sbjct: 80 NQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNL 139
Query: 146 IAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
IAQSQSGTGKTAAF L MLS+V P+ + PQ LCL+PTYELA+Q G+V+ +MGK +L +
Sbjct: 140 IAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKL 199
Query: 206 RYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
YAVRG LER +KI+EQI+IGTPG VLDW K +F D KIKVFVLDEADVMIATQGHQ
Sbjct: 200 AYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 259
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC 325
D SIRIQ+ LP +CQ++LFSAT++ V +FAQ +VP+P +IKLKREEE+LD IKQ+YV+C
Sbjct: 260 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLC 319
Query: 326 KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLS 385
+ DEKF+A+ N+YG +TI QAMIFCHTRKTA+WLA ++SKEG V LLSGE+ VEQR +
Sbjct: 320 SSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAA 379
Query: 386 ILDRFREGEFKI 397
+++RFREG+ K+
Sbjct: 380 VIERFREGKEKV 391
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 221/372 (59%), Positives = 285/372 (76%)
Query: 26 LSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIESK 85
LSN++LK+ T DEE+K A+ SLL K++R L+++
Sbjct: 20 LSNLHLKEEKIKPDTNGAVVKTNANAEKT----DEEEKEDRAAQ-SLLNKLIRSNLVDNT 74
Query: 86 QELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNM 145
++E+ ++DP+SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+PP N+
Sbjct: 75 NQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNL 134
Query: 146 IAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
IAQSQSGTGKTAAF L MLS+V P+ + PQ LCL+PTYELA+Q G+V+ +MGK +L +
Sbjct: 135 IAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKL 194
Query: 206 RYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
YAVRG LER +KI+EQI+IGTPG VLDW K +F D KIKVFVLDEADVMIATQGHQ
Sbjct: 195 AYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 254
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC 325
D SIRIQ+ LP +CQ++LFSAT++ V +FAQ +VP+P +IKLKREEE+LD IKQ+YV+C
Sbjct: 255 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLC 314
Query: 326 KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLS 385
+ DEKF+A+ N+YG +TI QAMIFCHTRKTA+WLA ++SKEG V LLSGE+ VEQR +
Sbjct: 315 SSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAA 374
Query: 386 ILDRFREGEFKI 397
+++RFREG+ K+
Sbjct: 375 VIERFREGKEKV 386
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
Identities = 217/339 (64%), Positives = 275/339 (81%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
DEE+K A+ SLL K++R L+++ ++E+ ++DP+SPLYSVK+FE L LKP+LL+GV
Sbjct: 48 DEEEKEDRAAQ-SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGV 106
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
Y MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ LC
Sbjct: 107 YAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLC 166
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLK 238
L+PTYELA+Q G+V+ +MGK +L + YAVRG LER +KI+E I+IGTPG VLDW K
Sbjct: 167 LSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSK 226
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
+F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 227 LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQK 286
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
+VP+P IIKLKREEE+LD IKQ+YV+C + DEKF+A+ NIYG +TI QAMIFCHTRKTA+
Sbjct: 287 VVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTAS 346
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 347 WLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKV 385
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
Identities = 215/340 (63%), Positives = 275/340 (80%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
K EE++ A +SLL K++R L+++ ++E+ ++DP SPLYSVK+FE L LKP+LL+G
Sbjct: 46 KTEEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQG 105
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
VY MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ L
Sbjct: 106 VYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCL 165
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CL+PTYELA+Q G+V+ +MGK +L + YAVRG LER +K++EQI+IGTPG VLDW
Sbjct: 166 CLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKVSEQIVIGTPGTVLDWCS 225
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K +F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 226 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQ 285
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
+VP+P IIKLKREEE+LD IKQ+YV+C N +EKF+A+ N+YG +TI QAMIFCHTRKTA
Sbjct: 286 KVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 1138 (405.7 bits), Expect = 1.9e-115, P = 1.9e-115
Identities = 215/340 (63%), Positives = 274/340 (80%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
K EE++ A +SLL K++R L+++ ++E+ ++DP SPLYSVK+FE L LKP+LL+G
Sbjct: 46 KTEEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQG 105
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
VY MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ L
Sbjct: 106 VYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRHPQCL 165
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CL+PTYELA+Q G+V+ +MGK +L + YAVRG LER +K+ EQI+IGTPG VLDW
Sbjct: 166 CLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKVGEQIVIGTPGTVLDWCS 225
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K +F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 226 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQ 285
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
+VP+P IIKLKREEE+LD IKQ+YV+C N +EKF+A+ N+YG +TI QAMIFCHTRKTA
Sbjct: 286 KVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 1138 (405.7 bits), Expect = 1.9e-115, P = 1.9e-115
Identities = 215/340 (63%), Positives = 274/340 (80%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
K EE++ A +SLL K++R L+++ ++E+ ++DP SPLYSVK+FE L LKP+LL+G
Sbjct: 46 KTEEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQG 105
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
VY MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ L
Sbjct: 106 VYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRHPQCL 165
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CL+PTYELA+Q G+V+ +MGK +L + YAVRG LER +K+ EQI+IGTPG VLDW
Sbjct: 166 CLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKVGEQIVIGTPGTVLDWCS 225
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K +F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 226 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQ 285
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
+VP+P IIKLKREEE+LD IKQ+YV+C N +EKF+A+ N+YG +TI QAMIFCHTRKTA
Sbjct: 286 KVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 209/339 (61%), Positives = 270/339 (79%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
DEED+ A +SLL K++R L+ + ++E+ ++DP+SPLYSVKTFE L LKP+LLKGV
Sbjct: 40 DEEDEKEDRATQSLLNKLIRSNLVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGV 99
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
YEMGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLS V+P+ + Q LC
Sbjct: 100 YEMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPACKWSQCLC 159
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLK 238
++PTYELA+Q G+V+ +MGK ++++ YAVRG +ER +I +QI+IGTPG VLDW +K
Sbjct: 160 ISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGVRIKDQIVIGTPGTVLDWCIK 219
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
+ D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP CQ++LFSAT++ V +FA+
Sbjct: 220 LKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGCQMLLFSATFEDSVWKFAER 279
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
+VP+P IIKLKREEE+LD IKQ+YV+C + ++KF A+ NIYG +TI QAMIFCHTRK A
Sbjct: 280 VVPDPNIIKLKREEETLDTIKQYYVLCNSKEDKFNALCNIYGAITIAQAMIFCHTRKMAN 339
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WLA +MSKEG V LLSGE+ VEQR ++++RFR+G+ K+
Sbjct: 340 WLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKV 378
>UNIPROTKB|Q58DE5 [details] [associations]
symbol:DDX19L "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
UniGene:Bt.49612 HOVERGEN:HBG107989 EMBL:DAAA02045970 EMBL:BT021652
IPI:IPI00694012 SMR:Q58DE5 Ensembl:ENSBTAT00000027604
Uniprot:Q58DE5
Length = 394
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 211/325 (64%), Positives = 263/325 (80%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
DEE+K A+ SLL K++R L+++ ++E+ ++DP+SPLYSVK+FE L LKP+LL+GV
Sbjct: 48 DEEEKEDRAAQ-SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGV 106
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
Y MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ LC
Sbjct: 107 YAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLC 166
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLK 238
L+PTYELA+Q G+V+ +MGK +L + YAVRG LER +KI+E I+IGTPG VLDW K
Sbjct: 167 LSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSK 226
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
+F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ
Sbjct: 227 LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQK 286
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
+VP+P IIKLKREEE+LD IKQ+YV+C + DEKF+A+ NIYG +TI QAMIFCHTRKTA+
Sbjct: 287 VVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTAS 346
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQR 383
WLA ++SKEG V LLSGE+ VEQR
Sbjct: 347 WLAAELSKEGHQVALLSGEMVVEQR 371
>ZFIN|ZDB-GENE-020419-30 [details] [associations]
symbol:ddx19 "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 19 (DBP5 homolog, yeast)" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-020419-30 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
HSSP:P10081 EMBL:AY099536 IPI:IPI00481107 RefSeq:NP_775365.1
UniGene:Dr.116877 ProteinModelPortal:Q8JGR1 SMR:Q8JGR1
STRING:Q8JGR1 GeneID:192339 KEGG:dre:192339 CTD:192339
InParanoid:Q8JGR1 NextBio:20797174 ArrayExpress:Q8JGR1
Uniprot:Q8JGR1
Length = 487
Score = 1097 (391.2 bits), Expect = 4.2e-111, P = 4.2e-111
Identities = 207/341 (60%), Positives = 268/341 (78%)
Query: 57 NKDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLK 116
+K EED A +SLL K++R L+ + ++E+ ++DP SPLYSVK+FE L LKP+LL+
Sbjct: 54 DKTEEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQ 113
Query: 117 GVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQV 176
GVY MGF PSKIQETALP +LA+PP N+IAQSQS TGKTAAF L MLS V+ + P+
Sbjct: 114 GVYAMGFNRPSKIQETALPMMLAEPPQNLIAQSQSRTGKTAAFVLAMLSHVDTENKWPEC 173
Query: 177 LCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWG 236
LC+ PTYELA+Q G+V+ +MGKH ++ + YA+RG LER K+ EQI+IGTPG VLDW
Sbjct: 174 LCVCPTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKLERGAKLQEQIVIGTPGTVLDWC 233
Query: 237 LKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFA 296
K +F D KIKVFVLDEADVMIATQGHQD S+RIQ+ LP CQ++LFSAT+++ V FA
Sbjct: 234 QKLKFIDPKKIKVFVLDEADVMIATQGHQDQSVRIQRMLPKTCQMLLFSATFEETVWNFA 293
Query: 297 QDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKT 356
+ +VP+P IIKLKREEE+LD IKQ+YV+C + +EKF+A+ NIYG +TI QAMIFCHTRKT
Sbjct: 294 KRIVPDPNIIKLKREEETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKT 353
Query: 357 AAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
A WLA ++S+EG V LLSGE+ VEQR ++++RFR+G+ K+
Sbjct: 354 AGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKV 394
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
Identities = 206/339 (60%), Positives = 262/339 (77%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
D+ED + +A SLL K++R+ LIES +E+ +KDP SPLYSVKTFE L LK ELLKG+
Sbjct: 54 DDEDDVVDLAANSLLNKLIRQSLIESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGI 113
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ LC
Sbjct: 114 YAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLC 173
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLK 238
LAPTYELA+Q G VV +MGK D+ V YA+RG + R ++T+QIIIGTPG VLDW K
Sbjct: 174 LAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTEVTKQIIIGTPGTVLDWCFK 233
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
+ DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V +FA+
Sbjct: 234 RKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAER 293
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
++P+P +IKL++EE +L+NI+Q+YV+C+N K++A+ NIYG +TIGQA+IFC TR+ A
Sbjct: 294 IIPDPNVIKLRKEELTLNNIRQYYVLCENRKGKYQALCNIYGGITIGQAIIFCQTRRNAK 353
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WL +M ++G V LLSGELTVEQR SI+ RFR+G+ K+
Sbjct: 354 WLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKV 392
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 204/340 (60%), Positives = 263/340 (77%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
+D+ED + +A SLL K++R+ L+ES +E+ +KDP SPLYSVKTFE L LK ELLKG
Sbjct: 31 EDDEDDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKG 90
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ L
Sbjct: 91 IYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNTLELFPQCL 150
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CLAPTYELA+Q G VV +MGK D+ V YA+RG ++ R +T+QIIIGTPG VLDW
Sbjct: 151 CLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTKQIIIGTPGTVLDWCF 210
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K + DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V +FA+
Sbjct: 211 KRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAE 270
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
++P+P +IKL++EE +L NI+Q+YV+C+N +K++A+ NIYG +TIGQA+IFC TR+ A
Sbjct: 271 RIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNA 330
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WL +M ++G V LLSGELTV+QR SI+ RFR+G+ K+
Sbjct: 331 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKV 370
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 203/340 (59%), Positives = 263/340 (77%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
+D+ED + +A SLL K++R+ L+ES +E+ +KDP SPLYSVKTFE L LK ELLKG
Sbjct: 52 EDDEDDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKG 111
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ L
Sbjct: 112 IYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALKLFPQCL 171
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CLAPTYELA+Q G VV +MGK D+ V YA+RG + R +T+QI+IGTPG VLDW
Sbjct: 172 CLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTKQIVIGTPGTVLDWCF 231
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K + DL+KI+VFVLDEADVMI TQG +D SIRIQ+ LPS+CQ++LFSAT++ V +FA+
Sbjct: 232 KRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALPSECQMLLFSATFEDSVWQFAE 291
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
++P+P +IKL++EE +L+NI+Q+YV+C N +K++A+ NIYG +TIGQA+IFC TR+ A
Sbjct: 292 RIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQAIIFCQTRRNA 351
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WL +M ++G V LLSGELTV+QR SI+ RFR+G+ K+
Sbjct: 352 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKV 391
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 203/339 (59%), Positives = 262/339 (77%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
D+ED + +A SLL K++R+ L+ES +E+ +KDP SPLYSVKTFE L LK ELLKG+
Sbjct: 53 DDEDDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGI 112
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L ML+RVN PQ LC
Sbjct: 113 YAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLNRVNALELFPQCLC 172
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLK 238
LAPTYELA+Q G VV +MGK D+ V YA+RG + R +T+QI+IGTPG VLDW K
Sbjct: 173 LAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVTKQIVIGTPGTVLDWCFK 232
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
+ DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V +FA+
Sbjct: 233 RKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAER 292
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
++P+P +IKL++EE +L+NI+Q+YV+C+N +K++A+ NIYG +TIGQA+IFC TR+ A
Sbjct: 293 IIPDPNVIKLRKEELTLNNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNAK 352
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WL +M ++G V LLSGELTVEQR SI+ RFR+G+ K+
Sbjct: 353 WLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKV 391
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 204/341 (59%), Positives = 262/341 (76%)
Query: 57 NKDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLK 116
N+D+E+ + +A SLL K++ + L+ES +E+ +KDP SPLYSVKTFE L LK ELLK
Sbjct: 54 NEDDEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLK 113
Query: 117 GVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQV 176
G+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ
Sbjct: 114 GIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQC 173
Query: 177 LCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWG 236
LCLAPTYELA+Q G VV +MGK D+ V YA+RG + R IT+QIIIGTPG VLDW
Sbjct: 174 LCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWC 233
Query: 237 LKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFA 296
K + DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V FA
Sbjct: 234 FKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFA 293
Query: 297 QDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKT 356
+ ++P+P +IKL++EE +L+NI+Q+YV+C++ +K++A+ NIYG +TIGQA+IFC TR+
Sbjct: 294 ERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRN 353
Query: 357 AAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
A WL +M ++G V LLSGELTVEQR SI+ RFR+G+ K+
Sbjct: 354 AKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKV 394
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 204/341 (59%), Positives = 262/341 (76%)
Query: 57 NKDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLK 116
N+D+E+ + +A SLL K++ + L+ES +E+ +KDP SPLYSVKTFE L LK ELLK
Sbjct: 51 NEDDEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLK 110
Query: 117 GVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQV 176
G+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ
Sbjct: 111 GIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQC 170
Query: 177 LCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWG 236
LCLAPTYELA+Q G VV +MGK D+ V YA+RG + R IT+QIIIGTPG VLDW
Sbjct: 171 LCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWC 230
Query: 237 LKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFA 296
K + DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V FA
Sbjct: 231 FKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFA 290
Query: 297 QDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKT 356
+ ++P+P +IKL++EE +L+NI+Q+YV+C++ +K++A+ NIYG +TIGQA+IFC TR+
Sbjct: 291 ERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRN 350
Query: 357 AAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
A WL +M ++G V LLSGELTVEQR SI+ RFR+G+ K+
Sbjct: 351 AKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKV 391
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 203/340 (59%), Positives = 262/340 (77%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
+D+ED + +A SLL K++R+ L+ES +E+ +KDP SPLYSVKTFE L LK ELLKG
Sbjct: 52 EDDEDDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKG 111
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ L
Sbjct: 112 IYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALKLFPQCL 171
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CLAPTYELA+Q G VV +MGK D+ V YA+RG + R +T+QI+IGTPG VLDW
Sbjct: 172 CLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTKQIVIGTPGTVLDWCF 231
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K + DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V +FA+
Sbjct: 232 KRKLIDLTKIRVFVLDEADVMIDTQGFADQSIRIQRALPSECQMLLFSATFEDSVWQFAE 291
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
++P+P +IKL++EE +L+NI+Q+YV+C N +K++A+ NIYG +TIGQA+IFC TR+ A
Sbjct: 292 RIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQAIIFCQTRRNA 351
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WL +M ++G V LLSGELTV+QR SI+ RFR+G+ K+
Sbjct: 352 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKV 391
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 201/340 (59%), Positives = 260/340 (76%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
+D+E+ + +A SLL K++R+ L+ES +E+ +KDP SPLYSVKTFE L LK ELLKG
Sbjct: 31 EDDEEDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKG 90
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVL 177
+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ L
Sbjct: 91 IYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCL 150
Query: 178 CLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGL 237
CLAPTYELA+Q G VV +MG+ D+ V YA+RG + R IT+QIIIGTPG VLDW
Sbjct: 151 CLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCF 210
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQ 297
K + DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS CQ++LFSAT++ V +FA+
Sbjct: 211 KRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFSATFEDSVWQFAE 270
Query: 298 DMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTA 357
++P+P +IKL++EE +L+NI+Q+YV+C N +K++A+ NIYG +TIGQA+IFC TR+ A
Sbjct: 271 RIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQAIIFCQTRRNA 330
Query: 358 AWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WL +M ++G V LL GELTV+QR +I+ RFR+G+ K+
Sbjct: 331 KWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKV 370
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 192/287 (66%), Positives = 237/287 (82%)
Query: 111 KPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPS 170
KP+LL+GVY MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV PS
Sbjct: 9 KPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPS 68
Query: 171 IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPG 230
+ PQ LCL+PTYELA+Q G+V+ +MGK +L + YAVRG LER +KI+EQI+IGTPG
Sbjct: 69 DRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPG 128
Query: 231 KVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDK 290
VLDW K +F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++
Sbjct: 129 TVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFED 188
Query: 291 EVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIF 350
V +FAQ +VP+P +IKLKREEE+LD IKQ+YV+C + DEKF+A+ N+YG +TI QAMIF
Sbjct: 189 SVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIF 248
Query: 351 CHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
CHTRKTA+WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 249 CHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 295
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 192/287 (66%), Positives = 237/287 (82%)
Query: 111 KPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPS 170
KP+LL+GVY MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV PS
Sbjct: 17 KPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPS 76
Query: 171 IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPG 230
+ PQ LCL+PTYELA+Q G+V+ +MGK +L + YAVRG LER +KI+EQI+IGTPG
Sbjct: 77 DRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPG 136
Query: 231 KVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDK 290
VLDW K +F D KIKVFVLDEADVMIATQGHQD SIRIQ+ LP +CQ++LFSAT++
Sbjct: 137 TVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFED 196
Query: 291 EVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIF 350
V +FAQ +VP+P +IKLKREEE+LD IKQ+YV+C + DEKF+A+ N+YG +TI QAMIF
Sbjct: 197 SVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIF 256
Query: 351 CHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
CHTRKTA+WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 257 CHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 303
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 900 (321.9 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 170/256 (66%), Positives = 211/256 (82%)
Query: 142 PHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHIT 201
P N+IAQSQSGTGKTAAF L MLSRV PS + PQ LCL+PTYELA+Q G+V+ +MGK
Sbjct: 99 PQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYP 158
Query: 202 DLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIAT 261
+L + YAVRG LER +KI+EQI+IGTPG VLDW K +F D KIKVFVLDEADVMIAT
Sbjct: 159 ELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIAT 218
Query: 262 QGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQH 321
QGHQD SIRIQ+ LP +CQ++LFSAT++ V +FAQ +VP+P +IKLKREEE+LD IKQ+
Sbjct: 219 QGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQY 278
Query: 322 YVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVE 381
YV+C + DEKF+A+ N+YG +TI QAMIFCHTRKTA+WLA ++SKEG V LLSGE+ VE
Sbjct: 279 YVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVE 338
Query: 382 QRLSILDRFREGEFKI 397
QR ++++RFREG+ K+
Sbjct: 339 QRAAVIERFREGKEKV 354
Score = 133 (51.9 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELL 115
DEE+K A+ SLL K++R L+++ ++E+ ++DP+SPLYSVK+FE L L L+
Sbjct: 48 DEEEKEDRAAQ-SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLPQNLI 103
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 187/343 (54%), Positives = 250/343 (72%)
Query: 59 DEEDKPLS----VAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPEL 114
DEED +A SLL K++RR L++S +E+ ++DP SPL+SVK+FE LHLK EL
Sbjct: 49 DEEDVRRGHIEDLANHSLLNKLLRRTLVDSPHNVEVLQRDPTSPLFSVKSFEELHLKNEL 108
Query: 115 LKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEP 174
L+G+Y MGF PSKIQE ALP +LADPP N+IAQSQSGTGKTAAF L MLSRV+ + + P
Sbjct: 109 LRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAMLSRVDANKKYP 168
Query: 175 QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLD 234
Q +CL+PT+ELA+Q G+VV +MGK + V YA+RG + ++ QI+IGTPG VLD
Sbjct: 169 QCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRPGKGSRLEAQIVIGTPGTVLD 228
Query: 235 WGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVME 294
W K R + I VFVLDEADVMI QGH D S+R+++ +P CQ++LFSAT++ V
Sbjct: 229 WCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKSCQMLLFSATFEDSVWA 288
Query: 295 FAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTR 354
FA+ +VP+P IIKLK+EE +L NI+Q Y C+N ++K+ A+ N+YGV+TI QA++FC TR
Sbjct: 289 FAERIVPDPNIIKLKKEELTLKNIQQFYDQCENKEQKYSALCNLYGVITIAQAIVFCQTR 348
Query: 355 KTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
K A+WL++K+S +G V LLSGEL V R ++ RFREG K+
Sbjct: 349 KIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKV 391
>UNIPROTKB|E9PR46 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 IPI:IPI00984425 Ensembl:ENST00000526875
ArrayExpress:E9PR46 Bgee:E9PR46 Uniprot:E9PR46
Length = 407
Score = 508 (183.9 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 93/164 (56%), Positives = 131/164 (79%)
Query: 234 DWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVM 293
+W K + DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V
Sbjct: 152 NWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVW 211
Query: 294 EFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHT 353
FA+ ++P+P +IKL++EE +L+NI+Q+YV+C++ +K++A+ NIYG +TIGQA+IFC T
Sbjct: 212 HFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQT 271
Query: 354 RKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
R+ A WL +M ++G V LLSGELTVEQR SI+ RFR+G+ K+
Sbjct: 272 RRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKV 315
Score = 473 (171.6 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 94/147 (63%), Positives = 110/147 (74%)
Query: 65 LSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFY 124
+ +A SLL K++ + L+ES +E+ +KDP SPLYSVKTFE L LK ELLKG+Y MGF
Sbjct: 3 VDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFN 62
Query: 125 APSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYE 184
PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ LCLAPTYE
Sbjct: 63 RPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYE 122
Query: 185 LAIQIGEVVAKMGKHITDLSVRYAVRG 211
LA+Q G VV +MGK D+ V YA+RG
Sbjct: 123 LALQTGRVVEQMGKFCVDVQVMYAIRG 149
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 177/323 (54%), Positives = 241/323 (74%)
Query: 75 KIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETAL 134
K++ L+E+ +E+ ++DP SPL+S++TFE LHLK ELL+GVY MGF PSKIQ AL
Sbjct: 2 KLLHTSLVENSHHVEVLQQDPSSPLFSIRTFEELHLKKELLQGVYTMGFNRPSKIQANAL 61
Query: 135 PTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVA 194
P L+A PP N+IAQSQSGTGKTAAF L MLSRV + + PQ LCLAPTYELA+QIG V
Sbjct: 62 PILMAHPPQNLIAQSQSGTGKTAAFVLAMLSRVKGAERYPQCLCLAPTYELALQIGHVAE 121
Query: 195 KMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDE 254
KMG+ D+ V YAV+G + + EQI+IGTPG +LDW K R ++ +I +FVLDE
Sbjct: 122 KMGRFCNDIRVTYAVQGNRVSPGTVLEEQIVIGTPGTMLDWCFKRRLLNMRRICMFVLDE 181
Query: 255 ADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEES 314
ADVMI TQG SIRIQ+ LP DCQ++LFSAT+ + + +FA +V P+IIKL++EE +
Sbjct: 182 ADVMIDTQGFSSQSIRIQRALPKDCQMLLFSATFKETLWKFALQIVSRPIIIKLRQEELT 241
Query: 315 LDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLL 374
L NI+Q+Y +C+N ++K+EA+ N+YG +TIGQAMIFC TR++A WL+ KM ++G V +L
Sbjct: 242 LTNIRQYYFVCRNWEQKYEALCNLYGSITIGQAMIFCQTRRSADWLSVKMIQDGHQVAML 301
Query: 375 SGELTVEQRLSILDRFREGEFKI 397
+ EL++ QR ++ RFR+G+ K+
Sbjct: 302 TAELSIVQRADVIQRFRDGKEKV 324
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 175/287 (60%), Positives = 222/287 (77%)
Query: 111 KPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPS 170
K ELLKG+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN
Sbjct: 1 KEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNAL 60
Query: 171 IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPG 230
PQ LCLAPTYELA+Q G VV +MG+ D+ V YA+RG + R IT+QIIIGTPG
Sbjct: 61 ELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPG 120
Query: 231 KVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDK 290
VLDW K + DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS CQ++LFSAT++
Sbjct: 121 TVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFSATFED 180
Query: 291 EVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIF 350
V +FA+ ++P+P +IKL++EE +L+NI+Q+YV+C N +K++A+ NIYG +TIGQA+IF
Sbjct: 181 SVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQAIIF 240
Query: 351 CHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
C TR+ A WL +M ++G V LLSGELTV+QR +I+ RFR+G+ K+
Sbjct: 241 CQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKV 287
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 169/277 (61%), Positives = 216/277 (77%)
Query: 121 MGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLA 180
MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ LCLA
Sbjct: 1 MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNTLELFPQCLCLA 60
Query: 181 PTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYR 240
PTYELA+Q G VV +MGK D+ V YA+RG ++ R +T+QIIIGTPG VLDW K +
Sbjct: 61 PTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTKQIIIGTPGTVLDWCFKRK 120
Query: 241 FFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMV 300
DL+KI+VFVLDEADVMI TQG D SIRIQ+ LPS+CQ++LFSAT++ V +FA+ ++
Sbjct: 121 LIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAERII 180
Query: 301 PNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWL 360
P+P +IKL++EE +L NI+Q+YV+C+N +K++A+ NIYG +TIGQA+IFC TR+ A WL
Sbjct: 181 PDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNAKWL 240
Query: 361 AEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+M ++G V LLSGELTV+QR SI+ RFR+G+ K+
Sbjct: 241 TVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKV 277
>WB|WBGene00011580 [details] [associations]
symbol:ddx-19 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007281
"germ cell development" evidence=IGI] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0007281
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00530000063236 HSSP:P10081 EMBL:Z50071
InterPro:IPR025574 Pfam:PF13634 UniGene:Cel.7700 GeneID:174418
KEGG:cel:CELE_T07D4.4 CTD:174418 UCSC:T07D4.4b.1 NextBio:883942
PIR:T24663 RefSeq:NP_495891.1 ProteinModelPortal:Q22308 SMR:Q22308
STRING:Q22308 PRIDE:Q22308 EnsemblMetazoa:T07D4.4a
WormBase:T07D4.4a HOGENOM:HOG000016712 InParanoid:Q22308
OMA:HEGGRFG ArrayExpress:Q22308 Uniprot:Q22308
Length = 1022
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 168/343 (48%), Positives = 231/343 (67%)
Query: 61 EDKPLSVAEKSLLQKIVRRGLIESKQEL-EIQRKDPHSPLYSVKTFEALHLKPELLKGVY 119
E P+ A+ +LL K +++ + K + ++QR+DP SPLYS+ +F L LKPE+LK +
Sbjct: 576 EQVPVP-ADIALLNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALD 634
Query: 120 EMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCL 179
M F P++IQETALP LL +PP N+IAQ+QSGTGKTAAF LTML R++ ++ PQ +CL
Sbjct: 635 TMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICL 694
Query: 180 APTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLE--RNKKITEQIIIGTPGKVLDWGL 237
APT ELA QIGEVV KMGK I +L + YA++G N+ R +K+TEQI+IGTPG D+
Sbjct: 695 APTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKLTEQIVIGTPGITRDYLQ 754
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP--SDC-QIMLFSATYDKEVME 294
KY+ D SKI+ VLDEADVMI QG D S I + SD Q MLFSATYD+ V+
Sbjct: 755 KYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVIN 814
Query: 295 FAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTR 354
FA ++ N +++ LKREE++L NIKQ YV C D K+ A+ N+Y + + ++IFCHT+
Sbjct: 815 FATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTK 874
Query: 355 KTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ WL E M G V +L G++TV +R + F+ G+FK+
Sbjct: 875 ASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKV 917
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 175/402 (43%), Positives = 253/402 (62%)
Query: 3 SLSDWIAATKNTSALKPDDLIDVLSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEED 62
S +DW + + + D ++ L+ K D + T K E+D
Sbjct: 9 SKTDWASLDSDEEVQRISDKVNQLNTSENKNEDQKA-TNLSDRLGPKITENVDA-KSEQD 66
Query: 63 KPLS-VAEKSLLQKIVR--RGLIESKQELEIQ----RKDPHSPLYSVKTFEALHLKPELL 115
K + +AE + ++ LI +K E+ ++ + DP+SPL+SVK+FE L LKPELL
Sbjct: 67 KATNTIAEDANTKQSENDESNLIPNKNEVRVKLADLQADPNSPLFSVKSFEELELKPELL 126
Query: 116 KGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQ 175
KG+Y M F PSKIQE ALP LL++PP NMI QSQSGTGKTAAF LTMLSRV+ S+ +PQ
Sbjct: 127 KGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQ 186
Query: 176 VLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDW 235
+CLAP+ ELA QI +VV +MGK+ T++ + ++ +++ + KI QI+IGTPG V+D
Sbjct: 187 AICLAPSRELARQIMDVVTEMGKY-TEVKTAFGIK-DSVPKGAKIDAQIVIGTPGTVMDL 244
Query: 236 GLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEF 295
+K R D IKVFVLDEAD M+ QG D S+RI+ LP + QI+LFSAT+ + V ++
Sbjct: 245 -MKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSERVEKY 303
Query: 296 AQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRK 355
A+ PN I+LK EE S++ IKQ Y+ C++ + K+ + +YG++TIGQ++IFC +
Sbjct: 304 AERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKD 363
Query: 356 TAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
TA +A +M+ +G V L+G L QR +I+D FR G K+
Sbjct: 364 TAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKV 405
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 176/383 (45%), Positives = 243/383 (63%)
Query: 19 PDDLIDVLSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVR 78
P DL+ L N K+ DT S K E V EK Q+
Sbjct: 8 PADLLASLKIDNEKE-DT-SEVSTKETVKSQPEKTADSIKPAEKLVPKVEEKKTKQE--D 63
Query: 79 RGLIESKQELEIQ----RKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETAL 134
LI S+ E++++ + DP+SPLYS K+F+ L L PELLKG+Y M F PSKIQE AL
Sbjct: 64 SNLISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERAL 123
Query: 135 PTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVA 194
P LL +PP NMIAQSQSGTGKTAAF+LTML+RVNP PQ +CLAP+ ELA Q EVV
Sbjct: 124 PLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQ 183
Query: 195 KMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDE 254
+MGK T ++ + V ++ E+NK+I Q+I+GTPG VLD ++ + L KIK+FVLDE
Sbjct: 184 EMGK-FTKITSQLIVP-DSFEKNKQINAQVIVGTPGTVLDL-MRRKLMQLQKIKIFVLDE 240
Query: 255 ADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEES 314
AD M+ QG D IR+++ LP D Q++LFSAT+ V ++A+ +VPN ++L+ E +
Sbjct: 241 ADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVN 300
Query: 315 LDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLL 374
+D IKQ Y+ CKN +KF+ ++ +YG++TIG ++IF T+KTA L K+ EG V +L
Sbjct: 301 VDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSIL 360
Query: 375 SGELTVEQRLSILDRFREGEFKI 397
G+L ++R ++D FREG K+
Sbjct: 361 HGDLQTQERDRLIDDFREGRSKV 383
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 176/395 (44%), Positives = 247/395 (62%)
Query: 12 KNTSALKPDDLIDVLSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDE---EDKPLSVA 68
K + KP++ +V+ K+ + E G K+E E K S
Sbjct: 50 KEGDSKKPEEKKEVVEEPENKEINDDKKDEDKKDESKDEVKDGDGAKEETKEEVKEESKE 109
Query: 69 E-KSLLQ-KIVRRGLIESKQELEIQ----RKDPHSPLYSVKTFEALHLKPELLKGVYEMG 122
E K + K LI+S E++++ + DP+SPLYSVK+FE L L PELLKG+Y M
Sbjct: 110 EPKEPKEPKEPATNLIKSSYEVKVKLADIQADPNSPLYSVKSFEELGLSPELLKGLYAMK 169
Query: 123 FYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPT 182
F PSKIQE ALP LL++PP NMI QSQSGTGKTAAF+LTMLSRV+P+I+ PQ LCL+PT
Sbjct: 170 FNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLTMLSRVDPTIKMPQCLCLSPT 229
Query: 183 YELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFF 242
ELA Q EV+ MGK T+++ + V + R + Q+++GTPG +D ++ R
Sbjct: 230 RELARQTLEVITTMGK-FTNITTQLVVPNA-IPRGSSVNAQVLVGTPGIAIDL-IRRRQL 286
Query: 243 DLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPN 302
+LSK+KVFVLDEAD M+ QG D +IR++K LP Q++LFSAT+ EV E+A+ +VP+
Sbjct: 287 NLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRGVQLVLFSATFPTEVREYAERLVPD 346
Query: 303 PLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAE 362
++LK+EE ++D IKQ Y+ C++ KFE + +YG++TIG ++IF ++TA L
Sbjct: 347 ANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELYGLLTIGSSIIFVEKKETADVLYG 406
Query: 363 KMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
KM KEG V +L G L R ++D FREG K+
Sbjct: 407 KMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKV 441
>UNIPROTKB|H3BN59 [details] [associations]
symbol:H3BN59 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC012184 Ensembl:ENST00000567706 Bgee:H3BN59 Uniprot:H3BN59
Length = 261
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 144/247 (58%), Positives = 180/247 (72%)
Query: 26 LSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIESK 85
LSN++LK+ T DEE+K A+ SLL K++R L+++
Sbjct: 20 LSNLHLKEEKIKPDTNGAVVKTNANAEKT----DEEEKEDRAAQ-SLLNKLIRSNLVDNT 74
Query: 86 QELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNM 145
++E+ ++DP+SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+PP N+
Sbjct: 75 NQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNL 134
Query: 146 IAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
IAQSQSGTGKTAAF L MLS+V P+ + PQ LCL+PTYELA+Q G+V+ +MGK +L +
Sbjct: 135 IAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKL 194
Query: 206 RYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
YAVRG LER +KI+EQI+IGTPG VLDW K +F D KIKVFVLDEADVMIATQGHQ
Sbjct: 195 AYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 254
Query: 266 DFSIRIQ 272
D SIRIQ
Sbjct: 255 DQSIRIQ 261
>DICTYBASE|DDB_G0281553 [details] [associations]
symbol:helC "DEAD-box RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281553 GO:GO:0007275
GO:GO:0005524 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
OMA:PQAICLA HSSP:Q9UHL0 EMBL:AF002677 RefSeq:XP_640633.1
ProteinModelPortal:Q54TF8 EnsemblProtists:DDB0215338 GeneID:8623244
KEGG:ddi:DDB_G0281553 Uniprot:Q54TF8
Length = 465
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 148/320 (46%), Positives = 216/320 (67%)
Query: 80 GLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
GL E +L+IQ+ DP+SPLYSVKTFE L LKPELLKGVY MG+ PSKIQE ALP ++
Sbjct: 47 GLDEFGIQLDIQQSDPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQ 106
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
P +N+IAQSQSGTGKTAAFTL ML+ V+PSI PQ +C++PT ELA+Q EV++K+G+
Sbjct: 107 SP-NNLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQF 165
Query: 200 ITDLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMI 259
+ Y +E K +T Q+IIGTPGK+L+ +K + + +K+ VLDEAD ++
Sbjct: 166 SNIKPLLYI---SEIEVPKNVTNQVIIGTPGKILENVIKKQL-SVKFLKMVVLDEADFIV 221
Query: 260 ATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLI-IKLKREEESLDNI 318
+ + I + LPS+ ++ LFSAT+ V E + +V +P I+LKR+E S++ I
Sbjct: 222 KMKNVPNQIAMINRLLPSNVKVCLFSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKI 281
Query: 319 KQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSG-E 377
Q+++ C + D K +S+IYG +++GQ+++F HT TA + +KM EG +V LL G +
Sbjct: 282 HQYFIDCGSEDNKALILSDIYGFISVGQSIVFVHTIATAKSVHQKMVDEGHSVSLLYGKD 341
Query: 378 LTVEQRLSILDRFREGEFKI 397
LT E+R + F++G+ K+
Sbjct: 342 LTTEERFKQIKDFKDGKSKV 361
>UNIPROTKB|H3BMQ5 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC012184 HGNC:HGNC:2742 ChiTaRS:DDX19B
Ensembl:ENST00000566216 Bgee:H3BMQ5 Uniprot:H3BMQ5
Length = 233
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 131/236 (55%), Positives = 168/236 (71%)
Query: 22 LIDVLSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGL 81
L + LSN++LK+ T DEE+K A+ SLL K++R L
Sbjct: 3 LREKLSNLHLKEEKIKPDTNGAVVKTNANAEKT----DEEEKEDRAAQ-SLLNKLIRSNL 57
Query: 82 IESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADP 141
+++ ++E+ ++DP+SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+P
Sbjct: 58 VDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEP 117
Query: 142 PHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHIT 201
P N+IAQSQSGTGKTAAF L MLS+V P+ + PQ LCL+PTYELA+Q G+V+ +MGK
Sbjct: 118 PQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYP 177
Query: 202 DLSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADV 257
+L + YAVRG LER +KI+EQI+IGTPG VLDW K +F D KIKVFVLDEADV
Sbjct: 178 ELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADV 233
>UNIPROTKB|I3LMM7 [details] [associations]
symbol:I3LMM7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 Ensembl:ENSSSCT00000028569
Uniprot:I3LMM7
Length = 393
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 149/378 (39%), Positives = 221/378 (58%)
Query: 26 LSNVNLKQADT-PSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIES 84
LSN++LK P + +++ED+ A +SLL K++R L+++
Sbjct: 20 LSNLHLKDEKVKPDANDKGAVVKTNANAEKTDEEEKEDR----AAQSLLNKLIRSNLVDN 75
Query: 85 KQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHN 144
++E+ ++DP+SPLYSVK+FE L LKP+LL+GVY MGF PSKIQE ALP +LA+PP N
Sbjct: 76 TNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQN 135
Query: 145 MIAQSQSGTGKTAAFTLT--MLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITD 202
+IAQSQSGTGKTAAF MLS+V P+ + PQ LCL+PTYELA+Q G+V+ +MGK +
Sbjct: 136 LIAQSQSGTGKTAAFAFVSAMLSQVEPANRYPQCLCLSPTYELALQTGKVIEQMGKFYPE 195
Query: 203 LSVRYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQ 262
L + YAVRG E KI ++I+ T VL++ + D+ + A Q
Sbjct: 196 LKLAYAVRGNKCEYEYKILIKVIVRTKS-VLEYSWQLTLGDIFITFSLSILSAFACFTQQ 254
Query: 263 GHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEF--AQDMVPNPLIIKLKREEESLDNIKQ 320
+ F + +L + F + + ++ + A++M + E+ +D I
Sbjct: 255 ANYIFFEQYLSKLKKKKKFR-FEFEWQRILIIYLSAEEM-------HTQAREDDVDRIDD 306
Query: 321 HYVMCKNIDEKFEAVSNIYGVVTIGQAMIFC-HTRKTAAWLAEKMSKEGLNVGLLSGELT 379
Y CK I K + + +Y + + F HTRKTA+WLA ++SKEG V LLSGE+
Sbjct: 307 -YRECKRIPPKRFSPNYLYHCYILSALLFFLRHTRKTASWLAAELSKEGHQVALLSGEMV 365
Query: 380 VEQRLSILDRFREGEFKI 397
VEQR ++++RFREG+ K+
Sbjct: 366 VEQRAAVIERFREGKEKV 383
>ASPGD|ASPL0000065093 [details] [associations]
symbol:AN7659 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0000822 "inositol hexakisphosphate binding" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 EMBL:BN001304 EMBL:AACD01000130 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_680928.1 ProteinModelPortal:Q5AVM1
EnsemblFungi:CADANIAT00000783 GeneID:2869488 KEGG:ani:AN7659.2
OMA:PQAICLA OrthoDB:EOG4B2X5R Uniprot:Q5AVM1
Length = 477
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 145/353 (41%), Positives = 214/353 (60%)
Query: 57 NKDEEDKPLSVAEKSLLQKIV-RRG---LIESKQELEIQ----RKDPHSPLYSVKTFEAL 108
N E +P VA+K+ L +G L E + +E++ + DP++PLYSVK FE L
Sbjct: 17 NPAETTEP--VADKAQLDGAASNQGGSDLAEPEYNVEVKLSDLQADPNNPLYSVKNFEDL 74
Query: 109 HLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVN 168
L P +L+G+ M F PSKIQE ALP L+ +PP N++ QSQSGTGKTAAF L +LSR++
Sbjct: 75 GLDPRILQGLSAMNFRKPSKIQERALPLLMGNPPKNLVGQSQSGTGKTAAFVLNILSRLD 134
Query: 169 PSIQE----PQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQI 224
S ++ PQ L LAPT ELA QI V+ MGK + L + AV + R ++ +
Sbjct: 135 LSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFLDGLHIGTAVPADTNARPTRMEASV 194
Query: 225 IIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLF 284
++GTPG V+D +K R +K+KV VLDEAD M+ QG D IR++ LP D Q++LF
Sbjct: 195 VVGTPGTVMDM-IKKRIMVAAKLKVIVLDEADNMLDQQGLGDQCIRVKALLPRDIQVVLF 253
Query: 285 SATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTI 344
SAT+ V ++A P + L+ EE +++ IKQ Y+ C + ++K+ + +YG++T+
Sbjct: 254 SATFPAHVHQYASKFAPAANELTLQHEELTVEGIKQLYLDCASEEDKYRTLVQLYGLLTV 313
Query: 345 GQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
G ++IF TR +A + +M EG V L+G + QR I+D+FR G K+
Sbjct: 314 GSSIIFVKTRASAVEIERRMVAEGHTVASLTGGIEGSQRDQIIDQFRAGHAKV 366
>UNIPROTKB|I3LMJ8 [details] [associations]
symbol:I3LMJ8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 Ensembl:ENSSSCT00000030702 OMA:RSHIVIG
Uniprot:I3LMJ8
Length = 377
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 144/349 (41%), Positives = 211/349 (60%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
DEE+K A+ SLL K++R L+++ ++E+ ++DP+SPLYSVK+FE L LKP+LL+GV
Sbjct: 29 DEEEKEDRAAQ-SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGV 87
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
Y MGF PSKIQE ALP +LA+PP N+IAQSQSGTGKTAAF L MLSRV P+ + PQ LC
Sbjct: 88 YAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLC 147
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKIT-EQIIIGTPGKVLDWGL 237
L+PTYELA+Q G+V+ +MGK +L + YAVRG E I + II P +L +
Sbjct: 148 LSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKCEYALVILLDGCIISAPTSILRY-- 205
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATY-DKEVME-- 294
L ++++ + Q ++ + L SD I++ S +Y D +E
Sbjct: 206 -MPSLSLEPRGLYIICRLYIRKHNQKFSSGGLKNKIALSSDTGILVNSCSYQDTSFLEET 264
Query: 295 -----FAQDMVPNPLIIKLKREEESLDNIKQH-YVMCKNIDEKFEAVSNIYGVVTIGQAM 348
F ++ PL+ L++ E + + + Y+ +K + ++ +
Sbjct: 265 RLIVVFRISLIFLPLV--LRKSSEIITQVTGYFYITSLKRPKKVFFLKILFTFPMFSPSQ 322
Query: 349 IFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
TRKTA+WLA ++SKEG V LLSGE+ VEQR ++++RFREG+ K+
Sbjct: 323 ----TRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKV 367
>UNIPROTKB|Q5ZMA1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AADN02040672
EMBL:AJ719483 IPI:IPI00819709 UniGene:Gga.7753
Ensembl:ENSGALT00000016637 InParanoid:Q5ZMA1 Uniprot:Q5ZMA1
Length = 237
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 120/223 (53%), Positives = 158/223 (70%)
Query: 26 LSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEEDKPLSVAEKSLLQKIVRRGLIESK 85
LS + LK+ + P ++++ED+ A +SLL K++R L+++
Sbjct: 20 LSTLQLKE-EKAKPDANGAVPKADDNVERTEDEEKEDR----AAQSLLNKLIRSNLVDTT 74
Query: 86 QELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNM 145
++E+ ++DP+SPLYSVK+FE LHLKP+LL+GVY MGF PSKIQE ALP +LA+PP N+
Sbjct: 75 NQVEVLQRDPNSPLYSVKSFEELHLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNL 134
Query: 146 IAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
IAQSQSGTGKTAAF L MLSRV P + PQ LCL+PTYELA+Q G+V+ +MGK +L +
Sbjct: 135 IAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKL 194
Query: 206 RYAVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIK 248
YAVRG LER +KI+EQI+IGTPG VLDW K +F D KIK
Sbjct: 195 AYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIK 237
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 125/314 (39%), Positives = 194/314 (61%)
Query: 87 ELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMI 146
ELE K + +TFE+++LKP+LLKG+Y GF PS IQ A+ +++ + I
Sbjct: 11 ELEFSHKSTKG-IKVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISG--RDTI 67
Query: 147 AQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVR 206
AQ+QSGTGKTA F++ ML ++ +E Q L L+PT ELAIQI VV +G ++ ++
Sbjct: 68 AQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYM-NIHTH 126
Query: 207 YAVRGENL-ERNKKITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQG 263
+ G+N+ E KK+ + QI+ GTPG+V+D +K R IKV +LDEAD + T+G
Sbjct: 127 ACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDV-IKRRNLQTRNIKVLILDEADELF-TKG 184
Query: 264 HQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYV 323
++ I K LP Q+++ SAT +EV+E +P+ I +KR+E SL IKQ+YV
Sbjct: 185 FKEQIYEIYKHLPPSVQVVVVSATLPREVLEMTSKFTTDPVKILVKRDEISLSGIKQYYV 244
Query: 324 MCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQR 383
C+ D KF+ + ++Y +TI QA+IFC+T+ WLA++M K+ V + G++ ++R
Sbjct: 245 QCEREDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDER 304
Query: 384 LSILDRFREGEFKI 397
SI++ FR G ++
Sbjct: 305 DSIMNDFRRGNSRV 318
>TAIR|locus:2101993 [details] [associations]
symbol:LOS4 "LOW EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 4" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0009737 GO:GO:0005737 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009409 GO:GO:0009408 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 EMBL:AL132958 eggNOG:COG0513 HOGENOM:HOG000268797
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GO:GO:0016973 EMBL:AY057548 EMBL:BT002444 EMBL:BT008867
IPI:IPI00533725 PIR:T46157 RefSeq:NP_190879.1 UniGene:At.35224
UniGene:At.675 ProteinModelPortal:Q93ZG7 SMR:Q93ZG7 PaxDb:Q93ZG7
PRIDE:Q93ZG7 EnsemblPlants:AT3G53110.1 GeneID:824477
KEGG:ath:AT3G53110 GeneFarm:1014 TAIR:At3g53110 InParanoid:Q93ZG7
OMA:ESATTFE PhylomeDB:Q93ZG7 ProtClustDB:CLSN2684906
Genevestigator:Q93ZG7 GermOnline:AT3G53110 Uniprot:Q93ZG7
Length = 496
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 133/349 (38%), Positives = 213/349 (61%)
Query: 58 KDEEDKPLSVAE-KSLLQKIVRR--GLIESKQELEIQR-KDPHSPLYSVKTFEALHLKPE 113
+D++D+ +V+E SL K + ++E ++ I+ +P S FE L+L PE
Sbjct: 42 EDDDDEEEAVSELNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPE 101
Query: 114 LLKGVY-EMGFYAPSKIQETALPTLLADPPH-NMIAQSQSGTGKTAAFTLTMLSRVNPSI 171
L+KG+Y EM F PSKIQ +LP ++ PPH ++IAQ+ +G+GKT F L MLSRV+P++
Sbjct: 102 LMKGLYVEMKFEKPSKIQAISLPMIMT-PPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTL 160
Query: 172 QEPQVLCLAPTYELAIQIGEVVAKMGKH--IT-DLSVRYAVRGENLE-RNKKITEQIIIG 227
+EPQ LC+ PT ELA Q EV+ KMGK IT +L+V + RG R ++ ++IG
Sbjct: 161 REPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIG 220
Query: 228 TPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQK---RLPSDCQIMLF 284
TPG + W + ++ L+ +K+ V DEAD M+AT G +D S++I K R+ + Q++LF
Sbjct: 221 TPGTLKKW-MAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLF 279
Query: 285 SATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN-IYGVVT 343
SAT+++ V +F V +P + +KRE+ +LD++KQ+ V+C K E + + I +
Sbjct: 280 SATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGD 339
Query: 344 IGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
IGQ +IF T+ +A + + +++ G +V + G LT R I+ F+E
Sbjct: 340 IGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKE 388
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 110/299 (36%), Positives = 187/299 (62%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+ TF A++LK ELL+G+Y GF PS IQ+ ++ ++ ++IAQ+QSGTGKTA F++
Sbjct: 25 IPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKG--RDVIAQAQSGTGKTATFSI 82
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKI 220
++L ++ +++E QVLCL+PT ELA+QI +V+ +G + ++ + G NL E +K+
Sbjct: 83 SILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGD-MMNVQCHVCIGGTNLGEDIRKL 141
Query: 221 T--EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
+ I+ GTPG+V D +K R IK+ VLDEAD M+ +G ++ + + LP
Sbjct: 142 DYGQHIVSGTPGRVFDM-IKRRVLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPA 199
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++
Sbjct: 200 TQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 259
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
Y +TI QA+IFC+T++ WL EKM + V + G++ ++R I+ FR G+ ++
Sbjct: 260 YDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRV 318
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 108/300 (36%), Positives = 188/300 (62%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
+V +F+ ++LK ELL+G+Y GF PS IQ+ A+ ++ H++IAQ+QSGTGKTA F+
Sbjct: 21 TVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFS 78
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
+++L +++ ++++ Q L LAPT ELA QI +VV +G + ++ + G ++ + K
Sbjct: 79 ISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKA 137
Query: 221 TE---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ Q+++GTPG+V D ++ RF +K+FVLDEAD M++ +G + I + LP
Sbjct: 138 LQDGPQVVVGTPGRVHDM-IQRRFLKTDGMKMFVLDEADEMLS-RGFTEQIYDIFQLLPQ 195
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT ++V+E + +P+ I +K++E +L+ IKQ Y+ + + K + +S+
Sbjct: 196 STQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSD 255
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y VTI QA+IFC+TR+ WL +K++ V + G++ QR I+ FR G ++
Sbjct: 256 LYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRV 315
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 108/300 (36%), Positives = 192/300 (64%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TFE+++LK +LL+G+Y GF APS IQ A+ +++ ++IAQ+QSGTGKTA FT+ +
Sbjct: 24 TFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGK--DVIAQAQSGTGKTATFTIGL 81
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRG-----ENLERNK 218
L ++ ++ Q L L+PT ELA QIG+VV +G ++ +++ +A+ G ++L++ +
Sbjct: 82 LQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNA-FAITGGKTLKDDLKKMQ 139
Query: 219 KITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIA-TQGHQDFSIRIQKRLPS 277
K Q + GTPG+VLD +K + +++ VLDEAD +++ T G + I +LP
Sbjct: 140 KHGCQAVSGTPGRVLDM-IKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPK 198
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
+CQ+++ SAT +K+++E + + +P+ I +KR+E SL+ IKQ+ V + KF+ + +
Sbjct: 199 NCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCD 258
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
IY +TI Q +IFC+T+K WL++++ + V + G++ E+R +++ FR G ++
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 106/299 (35%), Positives = 182/299 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+ TF+ + L+ +LL+G+Y GF PS IQ+ A+P +L ++IAQ+QSGTGKTA F++
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILK--ARDVIAQAQSGTGKTATFSI 82
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKI 220
++L ++ ++E Q L L+PT ELA+QI +VV +G ++ ++ + G NL E +K+
Sbjct: 83 SVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKL 141
Query: 221 T--EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ I + LP
Sbjct: 142 DYGQHVVSGTPGRVFDM-IRRRNLRTRAIKLLVLDEADEML-NKGFKEQLYDIYRYLPPG 199
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + KF+ + ++
Sbjct: 200 AQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDL 259
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
Y +TI QA++FC+TR+ WL +KM + V + G++ + R ++ FR G ++
Sbjct: 260 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRV 318
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 107/299 (35%), Positives = 186/299 (62%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ L+LKP +++G++ G+ PS IQ+ A+ L +++AQ+QSGTGKTA FT+
Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAI--LPITEGRDVLAQAQSGTGKTATFTI 79
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKIT 221
+ L R+N + + Q L LAPT ELA+QI V+ +G ++ ++V ++ G ++ + +
Sbjct: 80 SALQRINENEKATQALILAPTRELALQIKNVITAIGLYLK-VTVHASIGGTSMSDDIEAF 138
Query: 222 E---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
QI++GTPG+VLD ++ R+F K+K+F+LDEAD M+++ G ++ I + LP
Sbjct: 139 RSGVQIVVGTPGRVLDM-IERRYFKTDKVKMFILDEADEMLSS-GFKEQIYNIFRLLPET 196
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
QI+L SAT ++V+E + NP+ I +K++E +L+ IKQ Y+ + D KF+ + ++
Sbjct: 197 TQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDL 256
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
Y +++ QA+IFC+TR +L K+ ++ V + +L +R +I+ FR G +I
Sbjct: 257 YDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRI 315
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 107/299 (35%), Positives = 186/299 (62%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ L+LKP +++G++ G+ PS IQ+ A+ L +++AQ+QSGTGKTA FT+
Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAI--LPITEGRDVLAQAQSGTGKTATFTI 79
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKIT 221
+ L R+N + + Q L LAPT ELA+QI V+ +G ++ ++V ++ G ++ + +
Sbjct: 80 SALQRINENEKATQALILAPTRELALQIKNVITAIGLYLK-VTVHASIGGTSMSDDIEAF 138
Query: 222 E---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
QI++GTPG+VLD ++ R+F K+K+F+LDEAD M+++ G ++ I + LP
Sbjct: 139 RSGVQIVVGTPGRVLDM-IERRYFKTDKVKMFILDEADEMLSS-GFKEQIYNIFRLLPET 196
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
QI+L SAT ++V+E + NP+ I +K++E +L+ IKQ Y+ + D KF+ + ++
Sbjct: 197 TQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDL 256
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
Y +++ QA+IFC+TR +L K+ ++ V + +L +R +I+ FR G +I
Sbjct: 257 YDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRI 315
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 109/300 (36%), Positives = 188/300 (62%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+ TF+ ++LKPELL+G+Y GF PS IQ+ A+ +L + +++AQ+QSGTGKTA F++
Sbjct: 18 IDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGE--RDVLAQAQSGTGKTATFSI 75
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKIT 221
++L +++ S+++ Q L LAPT ELA QI +VV +G + ++ +A G L R+
Sbjct: 76 SVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGD-LMNVEC-HACIGGTLVRDDMAA 133
Query: 222 EQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
Q +++GTPG+V D ++ R +++FVLDEAD M++ +G +D I + LP
Sbjct: 134 LQAGVHVVVGTPGRVHDM-IQRRALPTDAVQMFVLDEADEMLS-RGFKDQIYDIFQLLPP 191
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT ++V+E + +P+ I +K++E +L+ IKQ YV + + K + + +
Sbjct: 192 TAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCD 251
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y VT+ QA+IFC+TR+ WL E++++ V + G++ QR +++ FR G +I
Sbjct: 252 LYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRI 311
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 109/298 (36%), Positives = 184/298 (61%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ + L LL+GV+ GF PS IQ+ A+ ++ H+++AQ+QSGTGKT F++
Sbjct: 21 VYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEG--HDVLAQAQSGTGKTGTFSI 78
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGEN-LERNKKI 220
L R++ S++ PQ L LAPT ELA+QI +VV + H+ D+ V + G + +E + +
Sbjct: 79 AALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEGL 137
Query: 221 TE-QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
+ QI++GTPG+V D ++ R F KIK+F+LDEAD M+++ G ++ +I LP
Sbjct: 138 RDAQIVVGTPGRVFD-NIQRRRFRTDKIKMFILDEADEMLSS-GFKEQIYQIFTLLPPTT 195
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q++L SAT +V+E + NP+ I +K++E +L+ IKQ YV + + K+E ++++Y
Sbjct: 196 QVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLY 255
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+++ QA+IFC+TR+ L K+ + V + +L ++R +I+ FR G +I
Sbjct: 256 DSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRI 313
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 109/298 (36%), Positives = 184/298 (61%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ + L LL+GV+ GF PS IQ+ A+ ++ H+++AQ+QSGTGKT F++
Sbjct: 21 VYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEG--HDVLAQAQSGTGKTGTFSI 78
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGEN-LERNKKI 220
L R++ S++ PQ L LAPT ELA+QI +VV + H+ D+ V + G + +E + +
Sbjct: 79 AALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEGL 137
Query: 221 TE-QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
+ QI++GTPG+V D ++ R F KIK+F+LDEAD M+++ G ++ +I LP
Sbjct: 138 RDAQIVVGTPGRVFD-NIQRRRFRTDKIKMFILDEADEMLSS-GFKEQIYQIFTLLPPTT 195
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q++L SAT +V+E + NP+ I +K++E +L+ IKQ YV + + K+E ++++Y
Sbjct: 196 QVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLY 255
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+++ QA+IFC+TR+ L K+ + V + +L ++R +I+ FR G +I
Sbjct: 256 DSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRI 313
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 106/299 (35%), Positives = 182/299 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+ TF+ + L+ +LL+G+Y GF PS IQ+ A+P +L ++IAQ+QSGTGKTA F++
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILK--ARDVIAQAQSGTGKTATFSI 82
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKI 220
++L ++ ++E Q L L+PT ELA+QI +VV +G ++ ++ + G NL E +K+
Sbjct: 83 SVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKL 141
Query: 221 T--EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ I + LP
Sbjct: 142 DYGQHVVSGTPGRVFDM-IRRRNLRTRAIKLLVLDEADEML-NKGFKEQLYDIYRYLPPG 199
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + KF+ + ++
Sbjct: 200 AQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDL 259
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
Y +TI QA++FC+TR+ WL +KM + V + G++ + R ++ FR G ++
Sbjct: 260 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRV 318
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 106/299 (35%), Positives = 187/299 (62%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V++F+ + LK ELL+G+Y GF PS IQ+ A+ ++IAQ+QSGTGKTA F++
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGK--DVIAQAQSGTGKTATFSV 85
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKIT 221
++L R++ Q L +APT ELA QI +V++ +G+++ ++++ + G ++ +++
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKL 144
Query: 222 E---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
E +++GTPG+V D + D S+IK+FVLDEAD M++ +G +D + + +P D
Sbjct: 145 EAGIHVVVGTPGRVGDM-INRNALDTSRIKMFVLDEADEMLS-RGFKDQIYEVFRSMPQD 202
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q++L SAT EV++ + NP+ I +K++E +L+ I+Q Y+ + + KF+ + ++
Sbjct: 203 VQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDL 262
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
Y VV + QA+IFC+TR+ L EKM++ V L G++ +R +I+ FR G ++
Sbjct: 263 YNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRV 321
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 102/300 (34%), Positives = 185/300 (61%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
+V +FE ++LK +LL+G+Y G+ PS +Q A+ + ++IAQ+QSGTGKTA F+
Sbjct: 19 AVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKG--RDVIAQAQSGTGKTATFS 76
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+ +L ++ S+++ Q L L+PT ELA+QI VV +G H+ ++ + G ++ + KK
Sbjct: 77 IGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHM-NVQCHACIGGTSVGNDIKK 135
Query: 220 IT--EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ + ++ GTPG+V D ++ R +K+ +LDEAD ++ QG ++ I + LP
Sbjct: 136 LDYGQHVVSGTPGRVTDM-IRRRNLRTRNVKMLILDEADELL-NQGFKEQIYDIYRYLPP 193
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q+++ SAT ++V+E NP+ I +KR+E +L+ +KQ+++ + + KF+ + +
Sbjct: 194 GTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCD 253
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IFC++R+ WL EKM + V + GE+ ++R +I+ FR+G ++
Sbjct: 254 LYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRV 313
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 106/297 (35%), Positives = 185/297 (62%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F+++ LKPELL+GVY GF PS IQ+ A+ ++ +++IAQ+QSGTGKTA F+++
Sbjct: 26 SFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKG--NDVIAQAQSGTGKTATFSISA 83
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKK-ITE 222
L +++P+++ Q L +APT ELA QI +VV +G + ++ + G + + + E
Sbjct: 84 LQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFM-NIQCHACIGGTAVRDDMNALRE 142
Query: 223 --QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
QI++GTPG++ D ++ R ++K+F+LDEAD M++ +G + I + LP Q
Sbjct: 143 GPQIVVGTPGRIHDM-IQRRVLKTDQMKMFILDEADEMLS-RGFTEQIYDIFQLLPQSTQ 200
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT ++V+E + +P+ I +K++E +L+ IKQ Y+ + + K + +S++Y
Sbjct: 201 VVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYE 260
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
VTI QA+IFC+TR+ WL +K++ V + G++ QR I+ FR G ++
Sbjct: 261 TVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRV 317
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 105/297 (35%), Positives = 182/297 (61%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 40 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 97
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L LAPT ELA+QI + + +G ++ ++ + G N+ E +K+
Sbjct: 98 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 156
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 157 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 214
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 215 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 274
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 275 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 331
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 105/297 (35%), Positives = 182/297 (61%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L LAPT ELA+QI + + +G ++ ++ + G N+ E +K+
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 155
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 213
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 274 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 105/297 (35%), Positives = 182/297 (61%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L LAPT ELA+QI + + +G ++ ++ + G N+ E +K+
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 155
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 213
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 274 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 105/297 (35%), Positives = 182/297 (61%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L LAPT ELA+QI + + +G ++ ++ + G N+ E +K+
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 155
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 213
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 274 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 105/297 (35%), Positives = 182/297 (61%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L LAPT ELA+QI + + +G ++ ++ + G N+ E +K+
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 155
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 213
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 274 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 105/297 (35%), Positives = 182/297 (61%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L LAPT ELA+QI + + +G ++ ++ + G N+ E +K+
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 155
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 213
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 274 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 109/324 (33%), Positives = 192/324 (59%)
Query: 77 VRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPT 136
VR+ +++ + +I+ + + TF+ + L+ +LL+G+Y GF PS IQ+ A+
Sbjct: 8 VRKRILKEEDMTKIEFETSEE-VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQ 66
Query: 137 LLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKM 196
++ ++IAQSQSGTGKTA F +++L ++ ++E Q L LAPT ELA QI +V+ +
Sbjct: 67 IIKG--RDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLAL 124
Query: 197 GKHITDLSVRYAVRGENL-ERNKKIT--EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLD 253
G ++ ++ + G N+ E +K+ + ++ GTPG+V D ++ R IK+ VLD
Sbjct: 125 GDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLD 182
Query: 254 EADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE 313
EAD M+ +G ++ + + LP Q+ L SAT E++E + +P+ I +KR+E
Sbjct: 183 EADEML-NKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDEL 241
Query: 314 SLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGL 373
+L+ IKQ +V + + KF+ + ++Y +TI QA+IFC+T++ WL EKM + V
Sbjct: 242 TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSS 301
Query: 374 LSGELTVEQRLSILDRFREGEFKI 397
+ G++ ++R SI+ FR G ++
Sbjct: 302 MHGDMPQKERESIMKEFRSGASRV 325
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 113/297 (38%), Positives = 176/297 (59%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TFE++ L+ ELL+G++ GF PS IQ+ A+ ++ + IAQ+QSGTGKTA F++
Sbjct: 33 TFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKG--RDTIAQAQSGTGKTATFSIGA 90
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITE- 222
L V +++ PQVL L+PT ELA QI +V + + + ++ V V G+NL + K E
Sbjct: 91 LQCVEVNVRSPQVLILSPTRELAQQIQKVALALSEFM-NIQVHACVGGKNLSDDVKKLET 149
Query: 223 --QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
I+ GTPG+VLD + + IK+ +LDEAD M++ G Q + + LP+ Q
Sbjct: 150 GVHIVSGTPGRVLDM-ITRKSLPTRHIKMMILDEADEMLSL-GFQQQINDVYRYLPNGTQ 207
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
I+L SAT ++V+ + + P+ I LKR+E +LD IKQ +V + D KF + +IY
Sbjct: 208 IVLVSATLTQDVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFGTLCDIYD 267
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T+K L E+M V + G++ ++R I+ FR GE ++
Sbjct: 268 SLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRV 324
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 109/296 (36%), Positives = 180/296 (60%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F+ ++L+ ELL+G+Y GF PS IQ+ A+ + ++IAQ+QSGTGKTA F++ +L
Sbjct: 32 FDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRG--RDVIAQAQSGTGKTATFSIAIL 89
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+++ SI+E Q L LAPT ELA QI VV +G+++ S + G N+ + +I E
Sbjct: 90 QQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHS-HACIGGTNVREDARILESG 148
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
+++GTPG+V D + + IK+FVLDEAD M++ +G +D + K LP D Q+
Sbjct: 149 CHVVVGTPGRVYDM-INRKVLRTQYIKLFVLDEADEMLS-RGFKDQIQDVFKMLPPDVQV 206
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+L SAT +V+E ++ + +P+ I +K+EE +L+ IKQ YV K + K + ++Y
Sbjct: 207 ILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDT 266
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
++I Q++IFC+TR+ L ++MS V + G++ R I+ +FR G ++
Sbjct: 267 LSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRV 322
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 110/300 (36%), Positives = 179/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ ++E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLST 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
+ Q++L SAT +V+E + + P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 NIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 101/297 (34%), Positives = 180/297 (60%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TFE +HLK LL+G+Y G+ +PS +Q A+ + + IAQ+QSGTGKTA F+++
Sbjct: 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKG--RDTIAQAQSGTGKTATFSISA 83
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L L+PT ELA QI V+ +G ++ ++ + G N+ E +K+
Sbjct: 84 LQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDY 142
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD ++ +G ++ + + LP Q
Sbjct: 143 GQHVVSGTPGRVADM-IRRRHLRTRHIKMLVLDEADELL-NRGFREQIYDVYRYLPPATQ 200
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+++ SAT +V++ + +P+ + +KR+E +L+ IKQ+++ + + KF+ + ++Y
Sbjct: 201 VVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYD 260
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+TR+ WL +KM + V + GE+ ++R SI+ FR+G ++
Sbjct: 261 TLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRV 317
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 108/301 (35%), Positives = 182/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L+ LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L +++ ++ Q + LAPT ELA QI +VV +G ++ + + G N+ + +K
Sbjct: 88 ISILQQIDVELKATQAMVLAPTRELAQQIQKVVLALGDYM-GATCHACIGGTNVRNDVQK 146
Query: 220 I---TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ I++GTPG+V D L R+ IK+F LDEAD M++ +G +D I ++L
Sbjct: 147 LQADVPHIVVGTPGRVFDM-LNRRYLSPKYIKMFALDEADEMLS-RGFKDQIYEIFQKLA 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+D Q++L SAT +EV+E + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 TDTQVILLSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 148
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 206
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 267 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 326
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 110/300 (36%), Positives = 178/300 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +
Sbjct: 33 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 90
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKK 219
++L ++ +E Q L LAPT ELA QI +V+ +G ++ + + G N+ E K
Sbjct: 91 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKL 149
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L +
Sbjct: 150 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNT 207
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q++L SAT +V+E + + +P+ I +K+EE +L+ IKQ Y+ + + K + + +
Sbjct: 208 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 267
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 268 LYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 327
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/301 (36%), Positives = 181/301 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 264
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 397 I 397
+
Sbjct: 325 V 325
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 110/297 (37%), Positives = 176/297 (59%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F+ ++LK LL+G+Y GF PS IQ+ A+ + +++IAQ+QSGTGKTA F +++L
Sbjct: 39 FDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAISIL 96
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKKITE 222
++ +E Q L LAPT ELA QI +V+ +G ++ S + G N+ E K E
Sbjct: 97 QQLEIEQKETQALVLAPTRELAQQIQKVILALGDYM-GASCHACIGGTNVRNEMQKLQAE 155
Query: 223 --QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
I++GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L ++ Q
Sbjct: 156 APHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLSTNIQ 213
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT +V+E + P+ I +K+EE +L+ IKQ Y+ + + K + + ++Y
Sbjct: 214 VVLLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 273
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IF +TR+ WL EKM V L G++ ++R I+ FR G ++
Sbjct: 274 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRV 330
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 103/299 (34%), Positives = 182/299 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+K+F+ + + ++L+GVY+ G+ PS+IQ+ AL +L ++IAQ+QSGTGKT+ +
Sbjct: 21 IKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKG--RDVIAQAQSGTGKTSMIAI 78
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKI 220
++ VN S ++ QVL L+P+ ELA Q + + +G H T++ + G+++ E KK+
Sbjct: 79 SVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAH-TNIQAHACIGGKSIGEDIKKL 137
Query: 221 TEQI--IIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
+ + GTPG+V D +K +K+ VLDE+D M++ +G +D + + LP D
Sbjct: 138 ERGVHAVSGTPGRVYDM-IKRGSLQTKAVKLLVLDESDEMLS-KGLKDQIYDVYRALPHD 195
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q+ L SAT +E++E + + +P+ I +K +E +L+ IKQ+YV + KF+ + ++
Sbjct: 196 IQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDL 255
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
YG +TI QA+IFC+TR+ WL EKM V + G+ ++R I+++FR + ++
Sbjct: 256 YGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRV 314
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 107/301 (35%), Positives = 179/301 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L+ LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 54 VDSFDDMNLRETLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 110
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L +++ ++ Q L LAPT ELA QI +V+ +G ++ + + G N+ +K
Sbjct: 111 ISILQQIDIELKGTQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEVQK 169
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + I++GTPG+V D L +F IK+FVLDEAD M++ +G +D I ++L
Sbjct: 170 LQAEAPHIVVGTPGRVYDM-LNRKFLSSKYIKMFVLDEADEMLS-RGFKDQIYEIFQKLS 227
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+ Q++L SAT EV++ + P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 228 TSIQVVLLSATMPAEVLDVTTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLC 287
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V L G++ + R I+ FR G +
Sbjct: 288 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSR 347
Query: 397 I 397
+
Sbjct: 348 V 348
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 102/299 (34%), Positives = 178/299 (59%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+ +F + +K ++L+GVYE GF PS IQ+ A+ +L ++IAQ+QSGTGKT+ L
Sbjct: 34 ITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQG--RDVIAQAQSGTGKTSMIAL 91
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKI 220
++ V+ S +E Q L L+PT ELA Q + + +G H ++ + G ++ E +K+
Sbjct: 92 SVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLH-ANIQAHACIGGNSVGEDIRKL 150
Query: 221 TE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
++ GTPG+V D +K R IK+ +LDE+D M++ +G +D + + LP D
Sbjct: 151 EHGVHVVSGTPGRVCDM-IKRRSLRTRAIKLLILDESDEMLS-RGFKDQIYDVYRYLPPD 208
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q+ L SAT E++E + P+ I +KR+E +L+ IKQ +V + + KF+ + ++
Sbjct: 209 LQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDL 268
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
Y +TI QA+IFC+T++ +L+EKM V + G++ ++R +I++ FR G+ ++
Sbjct: 269 YDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRV 327
>GENEDB_PFALCIPARUM|PF14_0563 [details] [associations]
symbol:PF14_0563 "DEAD-box RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 KO:K01509 RefSeq:XP_001348737.1
ProteinModelPortal:Q8IKP1 PRIDE:Q8IKP1
EnsemblProtists:PF14_0563:mRNA GeneID:812145 KEGG:pfa:PF14_0563
EuPathDB:PlasmoDB:PF3D7_1459000 HOGENOM:HOG000281979 OMA:DKKQPDD
ProtClustDB:CLSZ2501093 Uniprot:Q8IKP1
Length = 741
Score = 468 (169.8 bits), Expect = 6.0e-44, P = 6.0e-44
Identities = 113/299 (37%), Positives = 178/299 (59%)
Query: 100 YSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAF 159
+S T+E L + EL++ + + F PSKIQ ALP +L+ N+IAQSQ+G+GKT F
Sbjct: 322 HSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSNK-NLIAQSQNGSGKTLTF 380
Query: 160 TLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLER-NK 218
+ ML ++N ++ Q +C+ PT EL+ Q +VV K++ ++ V AV ER NK
Sbjct: 381 VIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYL-NVKVFLAV--PLCERYNK 437
Query: 219 KITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKR-LPS 277
QI +GTPGK LD+ LK +F D IK+FVLDEAD +I + + + KR LP
Sbjct: 438 SGGYQIYVGTPGKTLDF-LKRKFIDTKNIKLFVLDEADDLIDIKNNMSSQVETIKRFLPR 496
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
CQI+LFSATY+ V +FA P I +++E+ +L +KQ+Y++ +N ++K+ +S
Sbjct: 497 SCQILLFSATYNDSVRKFADQFAPKATKISVRQEDLTLKCVKQYYLITENDEQKYYYLSE 556
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+Y +TI Q +IF +++K+A L M++ NV L+ + SI+ RF + + +
Sbjct: 557 LYCSMTISQCVIFVNSKKSAYNLYNFMTENSHNVTLICAD-------SIISRFTKNQIQ 608
>UNIPROTKB|Q8IKP1 [details] [associations]
symbol:PF14_0563 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 KO:K01509 RefSeq:XP_001348737.1
ProteinModelPortal:Q8IKP1 PRIDE:Q8IKP1
EnsemblProtists:PF14_0563:mRNA GeneID:812145 KEGG:pfa:PF14_0563
EuPathDB:PlasmoDB:PF3D7_1459000 HOGENOM:HOG000281979 OMA:DKKQPDD
ProtClustDB:CLSZ2501093 Uniprot:Q8IKP1
Length = 741
Score = 468 (169.8 bits), Expect = 6.0e-44, P = 6.0e-44
Identities = 113/299 (37%), Positives = 178/299 (59%)
Query: 100 YSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAF 159
+S T+E L + EL++ + + F PSKIQ ALP +L+ N+IAQSQ+G+GKT F
Sbjct: 322 HSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSNK-NLIAQSQNGSGKTLTF 380
Query: 160 TLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLER-NK 218
+ ML ++N ++ Q +C+ PT EL+ Q +VV K++ ++ V AV ER NK
Sbjct: 381 VIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYL-NVKVFLAV--PLCERYNK 437
Query: 219 KITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKR-LPS 277
QI +GTPGK LD+ LK +F D IK+FVLDEAD +I + + + KR LP
Sbjct: 438 SGGYQIYVGTPGKTLDF-LKRKFIDTKNIKLFVLDEADDLIDIKNNMSSQVETIKRFLPR 496
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
CQI+LFSATY+ V +FA P I +++E+ +L +KQ+Y++ +N ++K+ +S
Sbjct: 497 SCQILLFSATYNDSVRKFADQFAPKATKISVRQEDLTLKCVKQYYLITENDEQKYYYLSE 556
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+Y +TI Q +IF +++K+A L M++ NV L+ + SI+ RF + + +
Sbjct: 557 LYCSMTISQCVIFVNSKKSAYNLYNFMTENSHNVTLICAD-------SIISRFTKNQIQ 608
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 100/297 (33%), Positives = 176/297 (59%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y G P Q+ + L+ +N + SQSGTGKTA F++++
Sbjct: 39 TFDTMGLREDLLRGIYAYGRPEPGAFQQRKI--LVVMKSNNAVVISQSGTGKTATFSISV 96
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKKIT- 221
L ++ ++E Q L LAPT ELA+QI + + +G ++ ++ + G N+ E +K+
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 155
Query: 222 -EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ ++ GTPG+V D ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 213
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 273
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 274 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 330
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 108/300 (36%), Positives = 176/300 (58%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V +F+ + L +LL+G+Y GF PS IQ+ A+ L ++IAQ+QSGTGKTA FT+
Sbjct: 23 VDSFDNMELPKDLLRGIYSYGFEKPSAIQQRAIIPL--SKGFDIIAQAQSGTGKTATFTV 80
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYA-VRGENLERNKKI 220
+LSR++ S+ + Q L +APT ELA QI +VV +G+++ S YA + G + + +
Sbjct: 81 GILSRIDISVLKCQALIIAPTRELAQQIQKVVLALGEYLHIKS--YACIGGTKITDDIQA 138
Query: 221 TEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ +++GTPG+V + L + I++F LDEAD M++ +G +D I + LP
Sbjct: 139 LQSGVHVVVGTPGRVFEM-LSRGIINRDTIRIFCLDEADEMLS-RGFKDQIYEIFRFLPK 196
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q+ LFSAT E + + NP+ I +K++E +L+ I+Q YV KFE +++
Sbjct: 197 TIQVGLFSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEVLTD 256
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y ++I Q++IFC+TR+ WL KM+++ V G+ + R IL FR G ++
Sbjct: 257 LYETLSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGDQ--KDRDGILQAFRSGATRV 314
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 108/301 (35%), Positives = 177/301 (58%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 146
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 147 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 204
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I L +L+ I+Q Y+ + + K + +
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRIXL-----TLEGIRQFYINVEREEWKLDTLC 259
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++Y +TI QA+IF +TR+ WL EKM V + G++ ++R I+ FR G +
Sbjct: 260 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 319
Query: 397 I 397
+
Sbjct: 320 V 320
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 103/300 (34%), Positives = 174/300 (58%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V TF+AL L +LL+G+Y GF PS IQ+ + +L ++ I Q+QSGTGKTA F +
Sbjct: 22 VDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNG--YDTIGQAQSGTGKTATFVI 79
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRG----ENLERN 217
+ L +N Q L LAPT ELA QI +VV +G ++ + V G E++++
Sbjct: 80 SSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLK-VKCHACVGGTVVREDIDKL 138
Query: 218 KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
K+ +++GTPG+V D + R + ++K+F+LDEAD M++ +G + + K+L
Sbjct: 139 KQGVH-MVVGTPGRVYDM-IDKRHLGVDRLKLFILDEADEMLS-RGFKAQIYEVFKKLVP 195
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
D Q+ LFSAT +E++E + +P I +K++E +L+ I+Q YV + + K + + +
Sbjct: 196 DIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCD 255
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI Q++I+C+TRK L ++M V + G++ + R I+ FR G ++
Sbjct: 256 LYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRV 315
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 103/300 (34%), Positives = 174/300 (58%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
V TF+AL L +LL+G+Y GF PS IQ+ + +L ++ I Q+QSGTGKTA F +
Sbjct: 22 VDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNG--YDTIGQAQSGTGKTATFVI 79
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRG----ENLERN 217
+ L +N Q L LAPT ELA QI +VV +G ++ + V G E++++
Sbjct: 80 SSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLK-VKCHACVGGTVVREDIDKL 138
Query: 218 KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
K+ +++GTPG+V D + R + ++K+F+LDEAD M++ +G + + K+L
Sbjct: 139 KQGVH-MVVGTPGRVYDM-IDKRHLGVDRLKLFILDEADEMLS-RGFKAQIYEVFKKLVP 195
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
D Q+ LFSAT +E++E + +P I +K++E +L+ I+Q YV + + K + + +
Sbjct: 196 DIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCD 255
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+Y +TI Q++I+C+TRK L ++M V + G++ + R I+ FR G ++
Sbjct: 256 LYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRV 315
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 103/297 (34%), Positives = 172/297 (57%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F+A+ L+P+LL+G+Y GF PS IQ+ + ++I Q+QSGTGKTA F +
Sbjct: 42 SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGL--DVIQQAQSGTGKTATFCSGV 99
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +++ S+ + Q L LAPT ELA QI +V+ +G ++ + + V G ++ ++++ +
Sbjct: 100 LQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKAQACVGGTSVREDQRVLQS 158
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+++GTPG+V D L+ + IK+FVLDEAD M++ +G +D I + LPS Q
Sbjct: 159 GVHVVVGTPGRVFDL-LRRQSLRADAIKMFVLDEADEMLS-RGFKDQIYDIFQLLPSKVQ 216
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+ +FSAT E +E + + P+ I +KR+E +L+ IKQ YV + K E + ++Y
Sbjct: 217 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYE 276
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ I Q++IF +TR+ WL +KM V G++ R I+ FR G ++
Sbjct: 277 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 333
>UNIPROTKB|J9PAF3 [details] [associations]
symbol:J9PAF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00530000063236 EMBL:AAEX03004077
Ensembl:ENSCAFT00000043955 OMA:IMKDIQR Uniprot:J9PAF3
Length = 267
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 80/125 (64%), Positives = 105/125 (84%)
Query: 273 KRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKF 332
+ LP DCQ++LFSAT++ V +FAQ +VP+P IIKLKREEE+LD IKQ+YV+C N DEKF
Sbjct: 50 RMLPKDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKF 109
Query: 333 EAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
+A+ N+YG +TI QAMIFCHTRKTA+WLA ++SKEG V LLSGE+ VEQR ++++RFRE
Sbjct: 110 QALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFRE 169
Query: 393 GEFKI 397
G+ K+
Sbjct: 170 GKEKV 174
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 104/298 (34%), Positives = 171/298 (57%)
Query: 103 KTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLT 162
++F+A+ L+ LL+G+Y GF PS IQ+ + ++I Q+QSGTGKTA F
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSG 96
Query: 163 MLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITE 222
+L +++ S+ + Q L LAPT ELA QI +V+ +G ++ + V V G ++ +++I +
Sbjct: 97 VLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQ 155
Query: 223 ---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
+++GTPG+V D LK + IK+FVLDEAD M++ +G +D I + LP
Sbjct: 156 AGVHVVVGTPGRVFDM-LKRQSLRADNIKMFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q+ +FSAT E +E + + P+ I +KR+E +L+ IKQ YV + + K E + ++Y
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 273
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ I Q++IF +TR+ WL +KM V G++ R I+ FR G ++
Sbjct: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 100/297 (33%), Positives = 172/297 (57%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 41 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 98
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L ++ ++E Q L LAPT ELA+QI +V + + A+ E + +
Sbjct: 99 LQCLDIQVRETQALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGSFKQEVDLPAGHE 158
Query: 224 I---IIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+ I G ++L + ++ R IK+ VLDEAD M+ +G ++ + + LP Q
Sbjct: 159 VARCISGIQLQLL-YMIRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 216
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
++L SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y
Sbjct: 217 VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 276
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+TI QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 277 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 333
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 100/294 (34%), Positives = 169/294 (57%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ + L+ +LL+G+Y GF PS IQ+ A+ ++ ++IAQSQSGTGKTA F++++
Sbjct: 40 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 97
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L ++ ++E Q L LAPT ELA+QI + + G+ V+ V R
Sbjct: 98 LQCLDIQVRETQALILAPTRELAVQIQKSLLATGEVPVPPPVKCTVSSWEQCRLACFLSL 157
Query: 224 IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIML 283
I+ + +D ++ R IK+ VLDEAD M+ +G ++ + + LP Q++L
Sbjct: 158 FILQSE---IDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQVVL 212
Query: 284 FSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVT 343
SAT E++E + +P+ I +KR+E +L+ IKQ +V + + KF+ + ++Y +T
Sbjct: 213 ISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 272
Query: 344 IGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
I QA+IFC+T++ WL EKM + V + G++ ++R SI+ FR G ++
Sbjct: 273 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRV 326
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 103/278 (37%), Positives = 167/278 (60%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA Q +VV +G ++ S + G N+ +K
Sbjct: 88 ISILQQIELDLKATQALVLAPTRELAQQ--KVVMALGDYM-GASCHACIGGTNVRAEVQK 144
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 145 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 202
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 203 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 262
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLL 374
++Y +TI QA+IF +TR+ WL EKM V +
Sbjct: 263 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAM 300
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 103/298 (34%), Positives = 170/298 (57%)
Query: 103 KTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLT 162
++F+A+ L+ LL+G+Y GF PS IQ+ + ++I Q+QSGTGKTA F
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSG 96
Query: 163 MLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITE 222
+L +++ ++ + Q L LAPT ELA QI +V+ +G + + V V G ++ +++I +
Sbjct: 97 VLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDY-QGVKVHACVGGTSVREDQRILQ 155
Query: 223 ---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
+++GTPG+V D L+ + IK+FVLDEAD M++ +G +D I + LP
Sbjct: 156 AGVHVVVGTPGRVFDM-LRRQSLRPDCIKMFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q+ +FSAT E +E + + P+ I +KR+E +L+ IKQ YV + D K E + ++Y
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY 273
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ I Q++IF +TR+ WL +KM V G++ R I+ FR G ++
Sbjct: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 111/323 (34%), Positives = 178/323 (55%)
Query: 85 KQELEIQRKD--PHSP-LYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K L I +KD P + + + K TFE +LK ELL G++E GF PS IQE A+P +
Sbjct: 23 KTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIT 82
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGKTAAF + L +V P + + Q L + PT ELA+Q +VV +GKH
Sbjct: 83 G--RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKH 140
Query: 200 ITDLSVRYAVRGENLERN-KKITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+S G NL + ++ E I++GTPG+VLD + + DLS +F++DEAD
Sbjct: 141 C-GISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASR-KVADLSDCSLFIMDEAD 198
Query: 257 VMIATQGHQDFSIRIQKRL---PSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE 313
M++ +DF I++ L P Q +LFSAT+ V EF + P I L EE
Sbjct: 199 KMLS----RDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLM-EEL 253
Query: 314 SLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGL 373
+L I Q+Y + +K ++ ++ + I QA+IFC++ LA+K++ G +
Sbjct: 254 TLKGITQYYAFVEE-RQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYY 312
Query: 374 LSGELTVEQRLSILDRFREGEFK 396
+ ++R + FR+G+ +
Sbjct: 313 SHARMKQQERNKVFHEFRQGKVR 335
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 98/276 (35%), Positives = 162/276 (58%)
Query: 126 PSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYEL 185
P Q LP + +++IAQ+QSGTGKTA F +++L ++ ++ Q L LAPT EL
Sbjct: 73 PPTRQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTREL 129
Query: 186 AIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITEQ---IIIGTPGKVLDWGLKYRF 241
A QI +VV +G ++ S + G N+ +K+ + II+GTPG+V D L R+
Sbjct: 130 AQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDM-LNRRY 187
Query: 242 FDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVP 301
IK+FVLDEAD M++ +G +D I ++L S+ Q++L SAT +V+E + +
Sbjct: 188 LSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMR 246
Query: 302 NPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLA 361
+P+ I +K+EE +L+ I+Q Y+ + + K + + ++Y +TI QA+IF +TR+ WL
Sbjct: 247 DPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLT 306
Query: 362 EKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
EKM V + G++ ++R I+ FR G ++
Sbjct: 307 EKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 342
>UNIPROTKB|H0YD26 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530129 Uniprot:H0YD26
Length = 191
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 83/129 (64%), Positives = 98/129 (75%)
Query: 57 NKDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLK 116
N+D+E+ + +A SLL K++ + L+ES +E+ +KDP SPLYSVKTFE L LK ELLK
Sbjct: 63 NEDDEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLK 122
Query: 117 GVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQV 176
G+Y MGF PSKIQE ALP +LA PP N+IAQSQSGTGKTAAF L MLSRVN PQ
Sbjct: 123 GIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQC 182
Query: 177 LCLAPTYEL 185
LCLAPTYEL
Sbjct: 183 LCLAPTYEL 191
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 104/312 (33%), Positives = 173/312 (55%)
Query: 93 KDPH---SPLYSVKT-FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQ 148
KD H S Y + T FE + + LL+G+Y GF PS IQ+ + +L ++I Q
Sbjct: 3 KDDHYKTSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNG--RDVILQ 60
Query: 149 SQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYA 208
SQSGTGKT F + L+ VN ++ E QV+ L+PT ELA Q +V + +I +++
Sbjct: 61 SQSGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYI-HVTIYCC 119
Query: 209 VRGENLERNKKITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
+ G+ + + K +I GTPG++ L R IK V+DEAD M+ +G +
Sbjct: 120 IGGKKMSDDIKALNNGVHVISGTPGRIYHM-LNLRHLKCKYIKQLVIDEADEML-NKGFK 177
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC 325
+ I + L + QI+L SAT +EV+E + P+ I +KR+E +L+ IKQ +V
Sbjct: 178 EQVYDIYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSI 237
Query: 326 KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLS 385
+ K+E ++++Y +TI QA++FC+T+ WL +KM + V + ++ +R
Sbjct: 238 EKEQWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDD 297
Query: 386 ILDRFREGEFKI 397
I+ +FR+ +F++
Sbjct: 298 IMLKFRQCKFRV 309
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 104/312 (33%), Positives = 173/312 (55%)
Query: 93 KDPH---SPLYSVKT-FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQ 148
KD H S Y + T FE + + LL+G+Y GF PS IQ+ + +L ++I Q
Sbjct: 3 KDDHYKTSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNG--RDVILQ 60
Query: 149 SQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYA 208
SQSGTGKT F + L+ VN ++ E QV+ L+PT ELA Q +V + +I +++
Sbjct: 61 SQSGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYI-HVTIYCC 119
Query: 209 VRGENLERNKKITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
+ G+ + + K +I GTPG++ L R IK V+DEAD M+ +G +
Sbjct: 120 IGGKKMSDDIKALNNGVHVISGTPGRIYHM-LNLRHLKCKYIKQLVIDEADEML-NKGFK 177
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC 325
+ I + L + QI+L SAT +EV+E + P+ I +KR+E +L+ IKQ +V
Sbjct: 178 EQVYDIYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSI 237
Query: 326 KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLS 385
+ K+E ++++Y +TI QA++FC+T+ WL +KM + V + ++ +R
Sbjct: 238 EKEQWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDD 297
Query: 386 ILDRFREGEFKI 397
I+ +FR+ +F++
Sbjct: 298 IMLKFRQCKFRV 309
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 97/309 (31%), Positives = 166/309 (53%)
Query: 96 HSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGK 155
+SP S TF L + P +L+ + ++G+ +P+ IQ +P L+A +++ +Q+GTGK
Sbjct: 6 YSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGS--DVVGLAQTGTGK 63
Query: 156 TAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSV-------RYA 208
TAAF + MLS+++ + + PQ L L PT ELA+Q+ E + G +++ L+V YA
Sbjct: 64 TAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYA 123
Query: 209 VRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFS 268
V+ L R Q+++GTPG+++D L+ DLS++ VLDEAD M+ T G D
Sbjct: 124 VQLAGLRRGA----QVVVGTPGRMIDH-LERATLDLSRVDFLVLDEADEML-TMGFADDV 177
Query: 269 IRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNI 328
RI P Q+ LFSAT + + + + +P + K + +NI Q Y+ +
Sbjct: 178 ERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQ---V 234
Query: 329 DEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILD 388
K +A++ + V ++F T++ +AEK+ G + +SG++ QR +
Sbjct: 235 ARKMDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTIT 294
Query: 389 RFREGEFKI 397
R+G+ I
Sbjct: 295 ALRDGDIDI 303
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 104/321 (32%), Positives = 175/321 (54%)
Query: 85 KQELEIQRKDPHSPLYSV-----KTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
KQ L + KD V K+FE +LK ELL G++E GF PS IQE ++P LA
Sbjct: 7 KQNLNLPPKDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALA 66
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGKTA+F + L V P + + Q L L PT ELA+Q +VV +GKH
Sbjct: 67 G--RDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKH 124
Query: 200 I-TDLSVRY---AVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEA 255
+ T V ++R + + + + I++GTPG+VLD + + DLS+ +FV+DEA
Sbjct: 125 VGTQCMVTTGGTSLRDDIVRLHDPV--HILVGTPGRVLDLAAR-KVVDLSECPLFVMDEA 181
Query: 256 DVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESL 315
D M++ + + +I + P + Q +LFSAT+ V F + P I L +E +L
Sbjct: 182 DKMLSRE-FKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINLM-DELTL 239
Query: 316 DNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLS 375
I Q Y + +K ++ ++ + I Q++IFC++ LA+K+++ G +
Sbjct: 240 KGISQFYAFVEE-KQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSH 298
Query: 376 GELTVEQRLSILDRFREGEFK 396
++ + R + FR+G+ +
Sbjct: 299 AKMPQQARNKVFHEFRQGKVR 319
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 104/321 (32%), Positives = 175/321 (54%)
Query: 85 KQELEIQRKDPHSPLYSV-----KTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
KQ L + KD V K+FE +LK ELL G++E GF PS IQE ++P LA
Sbjct: 7 KQNLNLPPKDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALA 66
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGKTA+F + L V P + + Q L L PT ELA+Q +VV +GKH
Sbjct: 67 G--RDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKH 124
Query: 200 I-TDLSVRY---AVRGENLERNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEA 255
+ T V ++R + + + + I++GTPG+VLD + + DLS+ +FV+DEA
Sbjct: 125 VGTQCMVTTGGTSLRDDIVRLHDPV--HILVGTPGRVLDLAAR-KVVDLSECPLFVMDEA 181
Query: 256 DVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESL 315
D M++ + + +I + P + Q +LFSAT+ V F + P I L +E +L
Sbjct: 182 DKMLSRE-FKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINLM-DELTL 239
Query: 316 DNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLS 375
I Q Y + +K ++ ++ + I Q++IFC++ LA+K+++ G +
Sbjct: 240 KGISQFYAFVEE-KQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSH 298
Query: 376 GELTVEQRLSILDRFREGEFK 396
++ + R + FR+G+ +
Sbjct: 299 AKMPQQARNKVFHEFRQGKVR 319
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 99/295 (33%), Positives = 167/295 (56%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE LK +LL G++E GF PS IQE ++P L +++A++++GTGKTAAF + L
Sbjct: 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTG--RDILARAKNGTGKTAAFVVPAL 106
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITE- 222
+NP + + Q L L PT ELA+Q +V +GKH+ ++V G L + ++ +
Sbjct: 107 ETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTTLRDDILRLQDP 165
Query: 223 -QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRL---PSD 278
I++GTPG++LD K DLS+ +F++DEAD +++ + F+ I++ L P D
Sbjct: 166 VHIVVGTPGRILDLAGK-NVADLSECPMFIMDEADKLLSIE----FTPVIEQLLQFHPKD 220
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q+MLFSAT+ V EF+ + NP I L +E +L I Q+Y + +K ++ +
Sbjct: 221 RQVMLFSATFPISVKEFSDKNMTNPYEINLM-DELTLRGITQYYAFVEE-KQKVHCLNTL 278
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ + I Q++IFC++ LA+K+++ G + ++ + R + FR G
Sbjct: 279 FSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNG 333
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 106/320 (33%), Positives = 175/320 (54%)
Query: 85 KQELEIQRKD--PHSP-LYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K++L++ KD P + + + K FE ++K EL+ G++E GF PS IQE +P L
Sbjct: 16 KEQLKLPAKDGRPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALT 75
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGKTAAF + L R+NP + Q L L PT ELA+Q V +GKH
Sbjct: 76 G--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKH 133
Query: 200 ITDLSVRYAVRGENLERNK-KITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ ++V G L + ++ + I++GTPG+VLD K DLS+ FV+DEAD
Sbjct: 134 L-GINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASK-GVADLSECPTFVMDEAD 191
Query: 257 VMIATQGHQDFSIRIQKRL---PSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE 313
+++ + F+ I++ L P D Q+MLFSAT+ V F + NP I L +E
Sbjct: 192 KLLSPE----FTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDRHMRNPYEINLM-DEL 246
Query: 314 SLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGL 373
+L I Q+Y + +K ++ ++ + I Q++IFC++ LA+K+++ G +
Sbjct: 247 TLRGITQYYAFVEE-KQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFY 305
Query: 374 LSGELTVEQRLSILDRFREG 393
+ + R + FR G
Sbjct: 306 SHARMLQQHRNRVFHDFRNG 325
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 100/298 (33%), Positives = 165/298 (55%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F AL L P ++ V G+ PS IQ+ ++P +LA H+MI Q+Q+GTGKTAAF L +L
Sbjct: 8 FAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAG--HDMIGQAQTGTGKTAAFALPIL 65
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIG---EVVAKMGKHITDLSVRY--AVRGENLERNKK 219
R++PS +EPQ L LAPT ELA+Q+ E AK +T ++V Y A G L+ +
Sbjct: 66 HRIDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAV-YGGAPMGPQLKAIRN 124
Query: 220 ITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
QI++ TPG++ D L+ L+ + VLDEAD M+ D + I K +P
Sbjct: 125 -GAQIVVATPGRLCDH-LRRDEKVLATVNHLVLDEADEMLKLGFMDDLEV-IFKAMPETR 181
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q +LFSAT + + A+ + +P +K++ + +++ I+Q +++ + D+K AV ++
Sbjct: 182 QTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLV-HADQKTSAVLSLL 240
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
V ++F T++ LA + +G L+G++ QR ++D ++G I
Sbjct: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDI 298
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/297 (32%), Positives = 165/297 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L LL+ V MGF + IQ +P L ++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK--DIIGQAQTGTGKTAAFGLPL 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +V+ + Q + +APT ELAIQ+GE + K+GKH + + G+++ R + ++
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
II+GTPG++LD + + L ++ VLDEAD M+ +D I +P Q
Sbjct: 120 HPHIIVGTPGRILDH-INRKTLRLQNVETVVLDEADEMLNMGFIEDIEA-ILTDVPETHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT + A+ + P IK+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQE-KKKFDVLTRLLD 236
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L+E ++ G + G+LT +R+S+L +F+EG ++
Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/297 (32%), Positives = 165/297 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L LL+ V MGF + IQ +P L ++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK--DIIGQAQTGTGKTAAFGLPL 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +V+ + Q + +APT ELAIQ+GE + K+GKH + + G+++ R + ++
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
II+GTPG++LD + + L ++ VLDEAD M+ +D I +P Q
Sbjct: 120 HPHIIVGTPGRILDH-INRKTLRLQNVETVVLDEADEMLNMGFIEDIEA-ILTDVPETHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT + A+ + P IK+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQE-KKKFDVLTRLLD 236
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L+E ++ G + G+LT +R+S+L +F+EG ++
Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/297 (32%), Positives = 165/297 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L LL+ V MGF + IQ +P L ++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK--DIIGQAQTGTGKTAAFGLPL 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +V+ + Q + +APT ELAIQ+GE + K+GKH + + G+++ R + ++
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
II+GTPG++LD + + L ++ VLDEAD M+ +D I +P Q
Sbjct: 120 HPHIIVGTPGRILDH-INRKTLRLQNVETVVLDEADEMLNMGFIEDIEA-ILTDVPETHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT + A+ + P IK+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQE-KKKFDVLTRLLD 236
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L+E ++ G + G+LT +R+S+L +F+EG ++
Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/297 (32%), Positives = 165/297 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L LL+ V MGF + IQ +P L ++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK--DIIGQAQTGTGKTAAFGLPL 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +V+ + Q + +APT ELAIQ+GE + K+GKH + + G+++ R + ++
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
II+GTPG++LD + + L ++ VLDEAD M+ +D I +P Q
Sbjct: 120 HPHIIVGTPGRILDH-INRKTLRLQNVETVVLDEADEMLNMGFIEDIEA-ILTDVPETHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT + A+ + P IK+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQE-KKKFDVLTRLLD 236
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L+E ++ G + G+LT +R+S+L +F+EG ++
Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/297 (32%), Positives = 165/297 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L LL+ V MGF + IQ +P L ++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK--DIIGQAQTGTGKTAAFGLPL 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +V+ + Q + +APT ELAIQ+GE + K+GKH + + G+++ R + ++
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
II+GTPG++LD + + L ++ VLDEAD M+ +D I +P Q
Sbjct: 120 HPHIIVGTPGRILDH-INRKTLRLQNVETVVLDEADEMLNMGFIEDIEA-ILTDVPETHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT + A+ + P IK+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQE-KKKFDVLTRLLD 236
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L+E ++ G + G+LT +R+S+L +F+EG ++
Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/297 (32%), Positives = 165/297 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L LL+ V MGF + IQ +P L ++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK--DIIGQAQTGTGKTAAFGLPL 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +V+ + Q + +APT ELAIQ+GE + K+GKH + + G+++ R + ++
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
II+GTPG++LD + + L ++ VLDEAD M+ +D I +P Q
Sbjct: 120 HPHIIVGTPGRILDH-INRKTLRLQNVETVVLDEADEMLNMGFIEDIEA-ILTDVPETHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT + A+ + P IK+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQE-KKKFDVLTRLLD 236
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L+E ++ G + G+LT +R+S+L +F+EG ++
Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/297 (32%), Positives = 165/297 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L LL+ V MGF + IQ +P L ++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK--DIIGQAQTGTGKTAAFGLPL 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
L +V+ + Q + +APT ELAIQ+GE + K+GKH + + G+++ R + ++
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
II+GTPG++LD + + L ++ VLDEAD M+ +D I +P Q
Sbjct: 120 HPHIIVGTPGRILDH-INRKTLRLQNVETVVLDEADEMLNMGFIEDIEA-ILTDVPETHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT + A+ + P IK+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQE-KKKFDVLTRLLD 236
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L+E ++ G + G+LT +R+S+L +F+EG ++
Sbjct: 237 IQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 96/294 (32%), Positives = 167/294 (56%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE LK ELL G++E G+ PS IQE A+P L+ +++A++++GTGKT A+ + +L
Sbjct: 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGK--DVLARAKNGTGKTGAYCIPVL 117
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITE- 222
+++P+ Q L + PT ELA+Q ++ ++ KH+ D+ V G L+ + +I +
Sbjct: 118 EQIDPTKDYIQALVMVPTRELALQTSQICIELAKHL-DIRVMVTTGGTILKDDILRIYQK 176
Query: 223 -QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIAT--QGHQDFSIRIQKRLPSDC 279
Q+II TPG++LD + + D+S ++ VLDEAD +++ QG D I +LP D
Sbjct: 177 VQLIIATPGRILDL-MDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVIL---KLPKDP 232
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
QI+LFSAT+ V F + + P I L EE +L + Q+Y + +K ++ ++
Sbjct: 233 QILLFSATFPLTVKNFMEKHLREPYEINLM-EELTLKGVTQYYAFVQE-RQKVHCLNTLF 290
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ I Q++IFC++ + LA+K+++ G + ++ R + FR+G
Sbjct: 291 SKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQG 344
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 96/298 (32%), Positives = 165/298 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ +L +L+K + MGF + IQ +P L++ ++I Q+Q+GTGKTAAF + +
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNK--DVIGQAQTGTGKTAAFGIPL 61
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMG--KHITDLSVRYAVR--GENLERNKK 219
+ ++NP Q + +APT ELAIQ+ E + K+G K L + Y + G + KK
Sbjct: 62 VEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPI-YGGQDIGRQIRALKK 120
Query: 220 ITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
II+GTPG++LD + R L+ + V+DEAD M+ G D I +PS+
Sbjct: 121 -NPNIIVGTPGRLLDH-INRRTIRLNNVNTVVMDEADEML-NMGFIDDIESILSNVPSEH 177
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q +LFSAT + A+ + P +K+K +E ++ NI+Q Y+ + +KF+ ++ +
Sbjct: 178 QTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQE-RKKFDTLTRLL 236
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ LAE ++ G + G+LT +R+ L +F+EG ++
Sbjct: 237 DIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEV 294
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 96/299 (32%), Positives = 168/299 (56%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ L L E++K + MGF + IQ +P L + ++I Q+Q+GTGKTAAF + +
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNK--DVIGQAQTGTGKTAAFGIPI 60
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMG--KHITDLSVRYAVRGENLERNKKIT 221
+ +VN Q L +APT ELAIQ+ E + K+G K + L + Y G+++ER +
Sbjct: 61 VEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPI-YG--GQDIERQIRAL 117
Query: 222 EQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
++ +I+GTPG+++D + L + VLDEAD M+ +D I +P++
Sbjct: 118 KKHPHVIVGTPGRIIDH-INRGTLRLEHVHTVVLDEADEMLNMGFIEDIEA-ILSHVPAE 175
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
Q +LFSAT + A+ + P ++K+K +E ++ NI+Q+Y+ +KF+ ++ +
Sbjct: 176 RQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHE-KKKFDILTRL 234
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ A++F T++ LAE ++ G + G+L+ +RLS+L +F+EG +I
Sbjct: 235 LDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEI 293
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 92/248 (37%), Positives = 152/248 (61%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETA-LPTLLADPPHNMIAQSQSGTGKTAAFT 160
V +F+ ++L LL+G+Y GF PS IQ+ A LP + +++IAQ+QSGTGKTA F
Sbjct: 15 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 71
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KK 219
+++L ++ ++ Q L LAPT ELA QI +VV +G ++ S + G N+ +K
Sbjct: 72 ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQK 130
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ + II+GTPG+V D L R+ IK+FVLDEAD M++ +G +D I ++L
Sbjct: 131 LQMEAPHIIVGTPGRVFDM-LNRRYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLN 188
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
S+ Q++L SAT +V+E + + +P+ I +K+EE +L+ I+Q Y+ + + K + +
Sbjct: 189 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 248
Query: 337 NIYGVVTI 344
++Y +TI
Sbjct: 249 DLYETLTI 256
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 361 (132.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 87/292 (29%), Positives = 158/292 (54%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE LK +LLKG+YE GF PS IQE ++P L +++A++++GTGKT AF + +L
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGS--DILARAKNGTGKTGAFCIPVL 183
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+++P+ Q + L PT ELA+Q +V ++ K++ ++ V G +L + Q
Sbjct: 184 EKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NIQVMVTTGGTSLRDDIMRLHQP 242
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
+++GTPG++LD K L + V+DEAD +++ + IQ LP + Q
Sbjct: 243 VHLLVGTPGRILDL-TKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQF-LPQNRQF 300
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
++FSAT+ V F + P +I L ++ +L + Q+Y + +K ++ ++
Sbjct: 301 LMFSATFPVTVKAFKDRHLRKPYVINLM-DQLTLMGVTQYYAFVEE-RQKVHCLNTLFSK 358
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ I Q++IFC++ LA+K+++ G + + ++ + R + FR G
Sbjct: 359 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNG 410
Score = 40 (19.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 6/20 (30%), Positives = 16/20 (80%)
Query: 74 QKIVRRGLIESKQELEIQRK 93
Q+ V+RG ++ Q++++Q++
Sbjct: 37 QQYVQRGYSQNPQQMQLQQQ 56
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 93/292 (31%), Positives = 164/292 (56%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F+ LHLK +LL+G++E G+ PS IQE A+P LA +++A++++GTGKTA+F + L
Sbjct: 51 FDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAG--RDIMARAKNGTGKTASFLIPAL 108
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITE- 222
+ +P+ QVL L PT ELA+Q +V ++GK++ ++ V + G +L+ + ++
Sbjct: 109 EKTDPTKDVIQVLILVPTRELALQTSQVCKELGKYM-NVQVMASTGGTSLKDDIMRLYNP 167
Query: 223 -QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
I++ TPG+VLD K +LS ++DEAD +++ Q Q ++ LP QI
Sbjct: 168 VHILVATPGRVLDLAQK-NVANLSNCHTMIMDEADKLLS-QEFQPLVEQLINFLPQQRQI 225
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT+ V F + + I L EE +L + Q+Y + +K ++ ++
Sbjct: 226 LLFSATFPVTVKSFKEHYLQQAFEINLM-EELTLKGVTQYYAFVEE-RQKIHCLNTLFSK 283
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ I Q++IFC++ LA+K+++ G + + ++ R + FR G
Sbjct: 284 LQINQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNG 335
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 95/298 (31%), Positives = 161/298 (54%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF+ L +L K + MGF + IQ +P LA+ ++I Q+Q+GTGKTAAF + +
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANK--DVIGQAQTGTGKTAAFGIPL 61
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMG--KHITDLSVRYAVR--GENLERNKK 219
+ ++NP Q + +APT ELAIQ+ E + K+G K L + Y + G + KK
Sbjct: 62 VEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPI-YGGQDIGRQIRALKK 120
Query: 220 ITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
II+GTPG++LD + R L + VLDEAD M+ +D I +P++
Sbjct: 121 -NPHIIVGTPGRLLDH-INRRTMRLQTVNTVVLDEADEMLNMGFIEDIE-SILSNVPAEH 177
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q +LFSAT + A+ + NP +K+K +E ++ NI+Q Y+ +KF+ ++ +
Sbjct: 178 QTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHE-RKKFDTLTRLL 236
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ + A++F T++ L E ++ G + G+LT +R+ L +F++G ++
Sbjct: 237 DIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEV 294
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 101/346 (29%), Positives = 178/346 (51%)
Query: 56 GNKDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKT-----FEALHL 110
G D + V EK++ +++ + K L++ D V FE L
Sbjct: 80 GGNSNGDAVVEV-EKTVQSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGNEFEDYFL 138
Query: 111 KPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPS 170
K ELL G+YE GF PS IQE ++P L +++A++++GTGKTAAF + +L +++
Sbjct: 139 KRELLMGIYEKGFERPSPIQEESIPIALTG--RDILARAKNGTGKTAAFCIPVLEKIDQD 196
Query: 171 IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITEQI--IIG 227
Q + + PT ELA+Q +V ++GKH+ + V G +L+ + ++ + + ++G
Sbjct: 197 NNVIQAVIIVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLKDDIMRLYQPVHLLVG 255
Query: 228 TPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSAT 287
TPG++LD K L V V+DEAD +++ Q Q + LP QI++FSAT
Sbjct: 256 TPGRILDL-TKKGVCVLKDCSVLVMDEADKLLS-QEFQPSVEHLISFLPESRQILMFSAT 313
Query: 288 YDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQA 347
+ V +F + NP +I L +E +L I Q Y + +K ++ ++ + I Q+
Sbjct: 314 FPVTVKDFKDRFLTNPYVINLM-DELTLKGITQFYAFVEE-RQKIHCLNTLFSKLQINQS 371
Query: 348 MIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+IFC++ LA+K+++ G + + ++ + R + FR G
Sbjct: 372 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 417
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 383 (139.9 bits), Expect = 6.3e-35, P = 6.3e-35
Identities = 94/297 (31%), Positives = 155/297 (52%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L LK +L+ + ++G+ PS IQ +P LL +++ +Q+G+GKTAAF+L +
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPL 64
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLE---RNKKI 220
L ++P ++ PQ+L LAPT ELA+Q+ E + KH+ ++V G+ + R +
Sbjct: 65 LQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQ 124
Query: 221 TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
QI++GTPG++LD LK DLSK+ VLDEAD M+ +D I ++P Q
Sbjct: 125 GPQIVVGTPGRLLDH-LKRGTLDLSKLSGLVLDEADEMLRMGFIEDVET-IMAQIPEGHQ 182
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
LFSAT + + + + P ++++ + +I Q Y + K EA+
Sbjct: 183 TALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGM-RKNEALVRFLE 241
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
A+IF T+ +AE + + G N L+G++ R L+R ++G I
Sbjct: 242 AEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDI 298
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 382 (139.5 bits), Expect = 6.8e-35, P = 6.8e-35
Identities = 98/296 (33%), Positives = 159/296 (53%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F +L L LL V +GF + + IQ +P LLA +++ ++Q+GTGKTAAF L L
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGK--DVLGEAQTGTGKTAAFGLPAL 74
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITE-- 222
++++ SI++PQ++ LAPT ELA+Q+ E + GK + L V G++ + E
Sbjct: 75 AKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERG 134
Query: 223 -QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
Q+++GTPG+++D L+ + L +++V VLDEAD M+ +D I +P Q+
Sbjct: 135 AQVVVGTPGRLMDH-LRRKSLKLDELRVCVLDEADEMLNMGFLEDIQW-ILDHIPKTAQM 192
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
LFSAT + + A + +P IK+ +++ NI Q+ I K A+ I V
Sbjct: 193 CLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGIT-KMTALERIAEV 251
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
V +IF TR +AEK+ + G L+G+L QR +D+ + G+ I
Sbjct: 252 VEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSI 307
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 93/295 (31%), Positives = 164/295 (55%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE LK ELL G++EMG+ PS IQE ++P L+ +++A++++GTGK+ A+ + +L
Sbjct: 90 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 147
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITE- 222
R++ Q + L PT ELA+Q+ ++ M KH+ + V G NL + ++ E
Sbjct: 148 ERIDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEI 207
Query: 223 -QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQ---KRLPSD 278
+II TPG++LD +K + K+++ V+DEAD +++ QDF + I+ LP
Sbjct: 208 VHVIIATPGRILDL-IKKGVAKVDKVQMAVMDEADKLLS----QDFVVLIEDIISFLPKK 262
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNI 338
QI+L+SAT+ V +F + P I L +E +L I Q+Y +K ++ +
Sbjct: 263 RQILLYSATFPISVQKFMTKHLQKPYEINLM-DELTLKGITQYYAYVTE-RQKVHCLNTL 320
Query: 339 YGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ + I Q++IFC++ + LA+K+++ G + + ++ E R + FR G
Sbjct: 321 FSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNG 375
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 111/339 (32%), Positives = 179/339 (52%)
Query: 70 KSLLQKIVRRGLI--ES-KQELEIQRKDPHSPLYSV-KT----FEALHLKPELLKGVYEM 121
+SL+QK+ L ES K +++ Q D V KT FE +LK ELL G++E
Sbjct: 3 ESLIQKLENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEA 62
Query: 122 GFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAP 181
GF PS IQE ++P L+ +++A++++GTGKTAAF + L +V+ + Q L L P
Sbjct: 63 GFERPSPIQEESIPIALSG--RDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVP 120
Query: 182 TYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI----TEQIIIGTPGKVLDWGL 237
T ELA+Q +V +GKH+ ++ V G L R+ I T I++GTPG+VLD
Sbjct: 121 TRELALQTSQVCKTLGKHM-NVKVMVTTGGTTL-RDDIIRLNDTVHIVVGTPGRVLDLAG 178
Query: 238 KYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRL---PSDCQIMLFSATYDKEVME 294
K D S+ FV+DEAD +++ + F+ I++ L P + QI L+SAT+ V
Sbjct: 179 K-GVADFSECTTFVMDEADKLLSPE----FTPIIEQLLSYFPKNRQISLYSATFPLIVKN 233
Query: 295 FAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTR 354
F + P I L +E +L + Q+Y +K ++ ++ + I Q++IFC++
Sbjct: 234 FMDKHLNKPYEINLM-DELTLRGVTQYYAFVDE-SQKVHCLNTLFSKLQINQSIIFCNST 291
Query: 355 KTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
LA+K+++ G + ++ R + FR G
Sbjct: 292 NRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNG 330
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 98/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEAD
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVEHVQMIVLDEAD 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 98/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEAD
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVDHVQMIVLDEAD 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 98/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEAD
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVDHVQMIVLDEAD 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 98/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEAD
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVDHVQMIVLDEAD 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 98/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEAD
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVDHVQMIVLDEAD 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 98/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEAD
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVDHVQMIVLDEAD 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 98/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEAD
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVDHVQMIVLDEAD 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 100/301 (33%), Positives = 166/301 (55%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
++ F+ L L LLK V ++GF P+ IQ+ A+P +L HN++ Q+ +GTGKTAA+ L
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEG--HNLVGQAPTGTGKTAAYLL 58
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVR-YAVRG-ENLERNKK 219
+L R+ ++ QVL + PT ELA+Q+ + VAK+GK+ L VR AV G + +ER +
Sbjct: 59 PVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKY---LKVRALAVYGGQAIERQIR 114
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
Q +I+GTPG++LD + + F ++IK+ +LDEAD M+ G D I L
Sbjct: 115 GLRQGVEVIVGTPGRILDH-IGRKTFPAAEIKIVILDEADEML-DMGFIDDIEAILNTLT 172
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+ Q +LFSAT + + + +KL E+++ I+Q Y EK E +
Sbjct: 173 NRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPET-EKIEGLV 231
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+I QA++FC T+K + E+++ G L G+++ +R + F+ G+ +
Sbjct: 232 SILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTE 291
Query: 397 I 397
+
Sbjct: 292 L 292
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 100/301 (33%), Positives = 166/301 (55%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
++ F+ L L LLK V ++GF P+ IQ+ A+P +L HN++ Q+ +GTGKTAA+ L
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEG--HNLVGQAPTGTGKTAAYLL 58
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVR-YAVRG-ENLERNKK 219
+L R+ ++ QVL + PT ELA+Q+ + VAK+GK+ L VR AV G + +ER +
Sbjct: 59 PVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKY---LKVRALAVYGGQAIERQIR 114
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
Q +I+GTPG++LD + + F ++IK+ +LDEAD M+ G D I L
Sbjct: 115 GLRQGVEVIVGTPGRILDH-IGRKTFPAAEIKIVILDEADEML-DMGFIDDIEAILNTLT 172
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+ Q +LFSAT + + + +KL E+++ I+Q Y EK E +
Sbjct: 173 NRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPET-EKIEGLV 231
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+I QA++FC T+K + E+++ G L G+++ +R + F+ G+ +
Sbjct: 232 SILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTE 291
Query: 397 I 397
+
Sbjct: 292 L 292
>FB|FBgn0011802 [details] [associations]
symbol:Gem3 "Gemin3" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IMP] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0022618 "ribonucleoprotein complex
assembly" evidence=IMP] [GO:0071254 "cytoplasmic U snRNP body"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014296 GO:GO:0007528 GO:GO:0006200 GO:GO:0003676
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0016779 HSSP:P10081 KO:K13131
GeneTree:ENSGT00530000062880 GO:GO:0071254 GO:GO:0022618
EMBL:AF160911 RefSeq:NP_524019.1 UniGene:Dm.921 SMR:Q9V3C4
IntAct:Q9V3C4 MINT:MINT-750334 STRING:Q9V3C4
EnsemblMetazoa:FBtr0076292 EnsemblMetazoa:FBtr0334100 GeneID:39195
KEGG:dme:Dmel_CG6539 UCSC:CG6539-RA CTD:39195 FlyBase:FBgn0011802
InParanoid:Q9V3C4 OMA:TPTKIQA OrthoDB:EOG44MW6X GenomeRNAi:39195
NextBio:812430 Uniprot:Q9V3C4
Length = 1028
Score = 382 (139.5 bits), Expect = 3.7e-34, P = 3.7e-34
Identities = 95/305 (31%), Positives = 166/305 (54%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
VKTFE L L LL G+ F P+KIQ A+P LA ++I QS+SGTGKT + +
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKM--DLIIQSKSGTGKTLIYVI 81
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKK-I 220
++ NP+I +P + + PT ELAIQ+ + + K D + G ++ +++K +
Sbjct: 82 AVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRM 141
Query: 221 TE-QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
E ++IIGTPG++L + R FD+SK+++ VLDEAD + T+ Q ++ + +P +
Sbjct: 142 NESRVIIGTPGRLLHL-YENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNR 200
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQH-YVMCK---NIDE---KF 332
QI+ SATYD+ + E ++ P++I L I+Q Y + + +++E K
Sbjct: 201 QIIACSATYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKL 260
Query: 333 EAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
+ + I+ + QA+IF ++ A ++ G++ L+SG + +RL + + +R
Sbjct: 261 QILGQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRN 320
Query: 393 GEFKI 397
+I
Sbjct: 321 FTMRI 325
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 377 (137.8 bits), Expect = 3.7e-34, P = 3.7e-34
Identities = 94/296 (31%), Positives = 154/296 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L L +L + EMGF +P+ IQ A+P LL + + ++Q+GTGKTAAF+L +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEG--RDALGKAQTGTGKTAAFSLPLL 85
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL---ERNKKIT 221
+++N S +PQ + +APT ELAIQ+ + +G++I L V G ++ R K
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSG 145
Query: 222 EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
I++GTPG+V D + R L + F+LDEAD M+ G D I ++ P Q
Sbjct: 146 AHIVVGTPGRVKDLITRDRLH-LDECHTFILDEADEMLK-MGFVDDVTWIMEQAPESAQR 203
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT V E + + NP + + +++ ++Q Y + K + EK EA++ +
Sbjct: 204 VLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGV-EKDEAMARLLET 262
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+++F TR+ LA+ + G L G++ R +D ++G I
Sbjct: 263 EETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDI 318
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 377 (137.8 bits), Expect = 3.7e-34, P = 3.7e-34
Identities = 94/296 (31%), Positives = 154/296 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L L +L + EMGF +P+ IQ A+P LL + + ++Q+GTGKTAAF+L +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEG--RDALGKAQTGTGKTAAFSLPLL 85
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL---ERNKKIT 221
+++N S +PQ + +APT ELAIQ+ + +G++I L V G ++ R K
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSG 145
Query: 222 EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
I++GTPG+V D + R L + F+LDEAD M+ G D I ++ P Q
Sbjct: 146 AHIVVGTPGRVKDLITRDRLH-LDECHTFILDEADEMLK-MGFVDDVTWIMEQAPESAQR 203
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT V E + + NP + + +++ ++Q Y + K + EK EA++ +
Sbjct: 204 VLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGV-EKDEAMARLLET 262
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+++F TR+ LA+ + G L G++ R +D ++G I
Sbjct: 263 EETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDI 318
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 98/330 (29%), Positives = 174/330 (52%)
Query: 67 VAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAP 126
+ + +L + ++ ++E ++L + +D FE LK ELL G++E G+ P
Sbjct: 26 IDDNIILDEEWKKKILEPLKDLRYKTEDVTKT--KGNEFEDYFLKRELLMGIFEKGYEKP 83
Query: 127 SKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELA 186
S IQE ++P LA N++A++++GTGKTAAF + +L + N Q L L PT ELA
Sbjct: 84 SPIQEESIPVALAGK--NILARAKNGTGKTAAFAIPLLEKCNTHKNFIQGLILVPTRELA 141
Query: 187 IQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITE--QIIIGTPGKVLDWGLKYRFFD 243
+Q ++ ++GKH+ + G +L + ++ I+ GTPG++LD K +
Sbjct: 142 LQTSAMIKELGKHMK-VQCMVTTGGTSLREDIMRLYNVVHILCGTPGRILDLANK-DVAN 199
Query: 244 LSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNP 303
LS + V+DEAD +++ + Q + K LP + QI+++SAT+ V EF + +
Sbjct: 200 LSGCHIMVMDEADKLLSPE-FQPIVEELMKFLPKEKQILMYSATFPVTVKEFRAIYLSDA 258
Query: 304 LIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEK 363
I L +E +L I Q+Y K +K ++ ++ + I QA+IFC++ LA+K
Sbjct: 259 HEINLM-DELTLKGITQYYAFVKE-RQKVHCLNTLFAKLQINQAIIFCNSITRVELLAKK 316
Query: 364 MSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+++ G + + ++ R + FR G
Sbjct: 317 ITELGYSSFYIHARMSQTHRNRVFHDFRNG 346
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 97/321 (30%), Positives = 176/321 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + S K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 132
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKH 199
+++A++++GTGK+ A+ + +L R++ Q + + PT ELA+Q+ ++ ++ KH
Sbjct: 133 G--RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 190
Query: 200 ITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ V G NL + ++ T ++I TPG++LD +K + +++ VLDEA+
Sbjct: 191 MGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVEHVQMIVLDEAN 249
Query: 257 VMIATQGHQDFSIRIQK----RLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREE 312
+++ QDF ++I + LP + QI+L+SAT+ V +F + P I L EE
Sbjct: 250 KLLS----QDF-VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EE 303
Query: 313 ESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 304 LTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF 362
Query: 373 LLSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 363 YIHAKMRQEHRNRVFHDFRNG 383
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 99/329 (30%), Positives = 177/329 (53%)
Query: 73 LQKIVRRGLIESKQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPS 127
+ I++ G + K+ L++ KD S + S K FE LK ELL G++EMG+ PS
Sbjct: 61 MSSIIKPG-DDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS 119
Query: 128 KIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAI 187
IQE ++P L+ +++A++++GTGK+ A+ + +L R++ Q + + PT ELA+
Sbjct: 120 PIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELAL 177
Query: 188 QIGEVVAKMGKHITDLSVRYAVRGENLERN-KKI--TEQIIIGTPGKVLDWGLKYRFFDL 244
Q+ ++ ++ KH+ V G NL + ++ T ++I TPG++LD +K +
Sbjct: 178 QVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKV 236
Query: 245 SKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPL 304
I++ VLDEAD +++ Q I LP + QI+L+SAT+ V +F + P
Sbjct: 237 DHIQMIVLDEADKLLS-QDFMQIMEDIIMTLPKNRQILLYSATFPLSVQKFMTLHLQKPY 295
Query: 305 IIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKM 364
I L EE +L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+
Sbjct: 296 EINLM-EELTLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKI 353
Query: 365 SKEGLNVGLLSGELTVEQRLSILDRFREG 393
S+ G + + ++ E R + FR G
Sbjct: 354 SQLGYSCFYIHAKMRQEHRNRVFHDFRNG 382
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 94/299 (31%), Positives = 169/299 (56%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF + L LLK + E + P++IQ+ ++P +LA H+++A++Q+GTGKTAAF L +
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAK--HDVMARAQTGTGKTAAFALPI 63
Query: 164 LSR---VNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN--- 217
L + V P E + L L PT ELA Q+ + G+ TD+++ A G + ++
Sbjct: 64 LQQLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQ-FTDVTIGIAYGGVSTKKQISE 122
Query: 218 KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
K+ I+I TPG++LD L+ LS I+ V DEAD M+ G ++ +I + LP
Sbjct: 123 LKVGVDILIATPGRLLDL-LRTESVSLSNIETLVFDEADRML-DMGFKEEIDQITQYLPK 180
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q +LFSAT+ ++ + +++++ P ++++ + ++ D+++Q V + D K E S
Sbjct: 181 TKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQ-LVYGVDADRKRELTSF 239
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ G Q ++F T++ A LA++M+K+G+ + G+ + R L F+EG+ +
Sbjct: 240 LIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVR 298
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 94/299 (31%), Positives = 169/299 (56%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF + L LLK + E + P++IQ+ ++P +LA H+++A++Q+GTGKTAAF L +
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAK--HDVMARAQTGTGKTAAFALPI 63
Query: 164 LSR---VNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN--- 217
L + V P E + L L PT ELA Q+ + G+ TD+++ A G + ++
Sbjct: 64 LQQLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQ-FTDVTIGIAYGGVSTKKQISE 122
Query: 218 KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
K+ I+I TPG++LD L+ LS I+ V DEAD M+ G ++ +I + LP
Sbjct: 123 LKVGVDILIATPGRLLDL-LRTESVSLSNIETLVFDEADRML-DMGFKEEIDQITQYLPK 180
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q +LFSAT+ ++ + +++++ P ++++ + ++ D+++Q V + D K E S
Sbjct: 181 TKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQ-LVYGVDADRKRELTSF 239
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ G Q ++F T++ A LA++M+K+G+ + G+ + R L F+EG+ +
Sbjct: 240 LIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVR 298
>UNIPROTKB|P54475 [details] [associations]
symbol:cshB "DEAD-box ATP-dependent RNA helicase CshB"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0009409 "response to cold" evidence=IGI]
[GO:0043590 "bacterial nucleoid" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0009409 GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
EMBL:D84432 PIR:D69954 RefSeq:NP_390393.1 ProteinModelPortal:P54475
SMR:P54475 IntAct:P54475 EnsemblBacteria:EBBACT00000001897
GeneID:937908 KEGG:bsu:BSU25140 PATRIC:18976864 GenoList:BSU25140
HOGENOM:HOG000268806 OMA:YAHVEPK ProtClustDB:CLSK2301471
BioCyc:BSUB:BSU25140-MONOMER Uniprot:P54475
Length = 438
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 88/296 (29%), Positives = 167/296 (56%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE LKP ++ V+ +GFY P+ IQ+ +P +L ++I QSQ+GTGKT A+ L +L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKK--ESVIGQSQTGTGKTHAYLLPLL 63
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKM--GKHITDLSVRYAVRGENLERN---KK 219
++++P+ QV+ APT ELA QI + K+ G+ + + + + G + +++ K
Sbjct: 64 NKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLK 123
Query: 220 ITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
I +++GTPG++ D +K + + K + V+DEAD+M+ D I R+P D
Sbjct: 124 IQPHLVVGTPGRIADL-IKEQALSVHKAESLVIDEADLMLDMGFLADVDY-IGSRMPEDL 181
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q+++FSAT +++ F + + NP ++ ++ + I+ + K+ D K + + +I
Sbjct: 182 QMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRD-KDKLLFDIM 240
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
+ ++F +T+ TA +A+ ++ +G+ +GLL G LT +R ++ + + EF
Sbjct: 241 SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEF 296
>TIGR_CMR|BA_4509 [details] [associations]
symbol:BA_4509 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268806 OMA:YAHVEPK HSSP:P10081
RefSeq:NP_846734.1 RefSeq:YP_021153.1 RefSeq:YP_030436.1
ProteinModelPortal:Q81LV0 SMR:Q81LV0
EnsemblBacteria:EBBACT00000013143 EnsemblBacteria:EBBACT00000016547
EnsemblBacteria:EBBACT00000022918 GeneID:1088235 GeneID:2818505
GeneID:2850064 KEGG:ban:BA_4509 KEGG:bar:GBAA_4509 KEGG:bat:BAS4187
ProtClustDB:CLSK887589 BioCyc:BANT260799:GJAJ-4244-MONOMER
BioCyc:BANT261594:GJ7F-4386-MONOMER Uniprot:Q81LV0
Length = 436
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 92/300 (30%), Positives = 167/300 (55%)
Query: 103 KTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLT 162
+TF KP L+ V E+ F P+ IQ+ P + ++I QSQ+G+GKT A+ L
Sbjct: 4 QTFTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGV--SVIGQSQTGSGKTHAYLLP 61
Query: 163 MLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITD---LSVRYAVRGENLERN-K 218
L+R+NP +E Q++ APT ELA QI E + K+ K + ++ R + G + +R+ +
Sbjct: 62 TLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSIE 121
Query: 219 KITEQ--IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
K+ +Q I++GTPG++ D + F + K ++DEAD+M+ D +I R+P
Sbjct: 122 KLKKQPHIVVGTPGRIKDLVEEQALF-VHKANTIIVDEADLMLDMGFIHDVD-KIAARMP 179
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+ Q+++FSAT +++ F + + NP I + ++ + NI +HY++ K + V+
Sbjct: 180 KNLQMLVFSATIPQKLKPFLKKYMENPEHIHINPKQVAAGNI-EHYLVPSKHRNKIDLVN 238
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ A++F +T+K A +A+ + + GL VG + G+L+ R ++ + R+ EF+
Sbjct: 239 KMLLQFKPYLAVVFTNTKKMADQVADGLMERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQ 298
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 353 (129.3 bits), Expect = 9.5e-34, Sum P(2) = 9.5e-34
Identities = 103/358 (28%), Positives = 187/358 (52%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSP--------LYSVKTFEALH 109
K+EE++ E+ L+K + I+ + + E + D ++P + F +L
Sbjct: 178 KEEEEEEEEEQEEMTLEKGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLS 237
Query: 110 LKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRV-- 167
L +LKG+ +G+ PS IQ +P L ++IA + +G+GKTAAF + ++ R+
Sbjct: 238 LSRPVLKGLASLGYVKPSPIQSATIPIALLGK--DIIAGAVTGSGKTAAFMIPIIERLLY 295
Query: 168 NPS-IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ--- 223
P+ I +V+ L PT ELAIQ+ +V ++ + ++ ++ AV G NL + +++ +
Sbjct: 296 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPD 355
Query: 224 IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIML 283
I+I TPG+ +D F++ +++ V+DEAD M+ +G QD I LPS+ Q +L
Sbjct: 356 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLE-EGFQDELNEIMGLLPSNRQNLL 414
Query: 284 FSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAV--SNIYGV 341
FSAT + ++ + P+ I + +++ + Q +V + D A+ + I +
Sbjct: 415 FSATMNSKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKL 474
Query: 342 VTIGQA--MIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
GQ ++F ++TA L M G++VG L G LT EQRL +++F+ E +
Sbjct: 475 DPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPV 532
Score = 47 (21.6 bits), Expect = 9.5e-34, Sum P(2) = 9.5e-34
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 56 GNKDEEDKPLSVAEKSLLQKIVRR--GL-----IESKQELEIQRK 93
G +++D V + L KI+RR GL I+SKQE E +++
Sbjct: 93 GESNKDDAEAFVKKDVDLDKIIRRKGGLVKMAHIDSKQEEETEKE 137
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 97/306 (31%), Positives = 169/306 (55%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F++L L P++L+ V E G+ P+ IQ+ A+P +L +++A +Q+GTGKTA FTL +
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG--RDLMASAQTGTGKTAGFTLPL 59
Query: 164 LSRV---NPSIQ--EP-QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN 217
L + P + P + L L PT ELA QIGE V K+ L++R V + N
Sbjct: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY---LNIRSLVVFGGVSIN 116
Query: 218 KKITE-----QIIIGTPGKVLDWGLKYR-FFDLSKIKVFVLDEADVMIATQGHQDFSIRI 271
++ + +++ TPG++LD L+++ L ++++ VLDEAD M+ D R+
Sbjct: 117 PQMMKLRGGVDVLVATPGRLLD--LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIR-RV 173
Query: 272 QKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEK 331
+LP+ Q +LFSAT+ ++ A+ ++ NPL I++ R + D + QH V + K
Sbjct: 174 LTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQH-VHFVDKKRK 232
Query: 332 FEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFR 391
E +S++ G Q ++F T+ A LAE+++K+G+ + G + R L F+
Sbjct: 233 RELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFK 292
Query: 392 EGEFKI 397
G+ ++
Sbjct: 293 SGDIRV 298
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 96/305 (31%), Positives = 164/305 (53%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+FE L L ELL+ + E G+ P+ +Q A+P +L +++ +Q+GTGKTA FTL +
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQ--ARDVMVTAQTGTGKTAGFTLPL 68
Query: 164 LSRV---NPSIQ---EPQV--LCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLE 215
L R+ P +Q +P + L L PT ELA+Q+ E V GK++ L G +++
Sbjct: 69 LQRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLP-LKATVVHGGVSIK 127
Query: 216 ---RNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQ 272
+ + I++ TPG++LD + +LS+++ FVLDEAD M+ D RI
Sbjct: 128 PQINHLRRGVDILVATPGRLLDL-VNQGVLNLSRVEFFVLDEADRMLDMGFLPDIR-RIL 185
Query: 273 KRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKF 332
K LP Q +LFSAT+ KE+ E ++ +P +I++ R + I H V + K
Sbjct: 186 KLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARIT-HVVHPVDRQRKR 244
Query: 333 EAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
E +S + G Q ++F T+ A L++++ +GL+ + G + R+ L +F++
Sbjct: 245 ELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQ 304
Query: 393 GEFKI 397
G+ ++
Sbjct: 305 GKIRV 309
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 96/305 (31%), Positives = 164/305 (53%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+FE L L ELL+ + E G+ P+ +Q A+P +L +++ +Q+GTGKTA FTL +
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQ--ARDVMVTAQTGTGKTAGFTLPL 68
Query: 164 LSRV---NPSIQ---EPQV--LCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLE 215
L R+ P +Q +P + L L PT ELA+Q+ E V GK++ L G +++
Sbjct: 69 LQRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLP-LKATVVHGGVSIK 127
Query: 216 ---RNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQ 272
+ + I++ TPG++LD + +LS+++ FVLDEAD M+ D RI
Sbjct: 128 PQINHLRRGVDILVATPGRLLDL-VNQGVLNLSRVEFFVLDEADRMLDMGFLPDIR-RIL 185
Query: 273 KRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKF 332
K LP Q +LFSAT+ KE+ E ++ +P +I++ R + I H V + K
Sbjct: 186 KLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARIT-HVVHPVDRQRKR 244
Query: 333 EAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
E +S + G Q ++F T+ A L++++ +GL+ + G + R+ L +F++
Sbjct: 245 ELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQ 304
Query: 393 GEFKI 397
G+ ++
Sbjct: 305 GKIRV 309
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 97/320 (30%), Positives = 173/320 (54%)
Query: 85 KQELEIQRKDPH---SPLYSVK--TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
K+ L++ KD S + + K FE LK ELL G++EMG+ PS IQE ++P L+
Sbjct: 74 KKNLKLPPKDLRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 133
Query: 140 DPPHNMIAQSQSGTGKTAAFTLTMLSRVN---PSIQEPQVLCLAPTYELAIQIGEVVAKM 196
+++A++++GTGK+ A+ + +L R++ SIQ V+ PT ELA+Q+ ++ ++
Sbjct: 134 G--RDILARAKNGTGKSGAYLIPLLERIDLKKDSIQAAVVI--VPTRELALQVSQICIQV 189
Query: 197 GKHITDLSVRYAVRGENLERN-KKITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLD 253
KH+ + V G NL + ++ E ++I TPG++LD +K + ++++ VLD
Sbjct: 190 SKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDL-IKKGVAKVGQVQMIVLD 248
Query: 254 EADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE 313
EAD +++ Q I L QI+L+SAT+ V +F + P I L EE
Sbjct: 249 EADKLLS-QDFVQMMEEILSSLSKQRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EEL 306
Query: 314 SLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGL 373
+L + Q+Y +K ++ ++ + I Q++IFC++ + LA+K+S+ G +
Sbjct: 307 TLKGVTQYYAYVTE-RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFY 365
Query: 374 LSGELTVEQRLSILDRFREG 393
+ ++ E R + FR G
Sbjct: 366 IHAKMRQEHRNRVFHDFRNG 385
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 86/292 (29%), Positives = 160/292 (54%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE L +LL G++E G+ PS IQE ++ L +++A++++GTGKT A+ + ++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG--QDILARAKNGTGKTGAYCIPVI 102
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKI--T 221
++ P+++ Q + + PT ELA+Q ++ ++ KHI L V G +L + ++ T
Sbjct: 103 EKIQPALKAIQAMVIVPTRELALQTSQICVELSKHI-QLKVMVTTGGTDLRDDIMRLNGT 161
Query: 222 EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
++I TPG++LD ++ + K VLDEAD +++ Q Q R+ LP + Q+
Sbjct: 162 VHLVIATPGRILDL-MEKGVAKMEHCKTLVLDEADKLLS-QDFQGILDRLINFLPKERQV 219
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
ML+SAT+ V F Q + P I L EE +L + Q+Y + +K ++ ++
Sbjct: 220 MLYSATFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQE-KQKVHCLNTLFRK 277
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ I Q++IFC++ + LA+K+++ G + + ++ R + FR+G
Sbjct: 278 LQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQG 329
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 86/292 (29%), Positives = 160/292 (54%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE L +LL G++E G+ PS IQE ++ L +++A++++GTGKT A+ + ++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG--QDILARAKNGTGKTGAYCIPVI 102
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKI--T 221
++ P+++ Q + + PT ELA+Q ++ ++ KHI L V G +L + ++ T
Sbjct: 103 EKIQPALKAIQAMVIVPTRELALQTSQICVELSKHI-QLKVMVTTGGTDLRDDIMRLNGT 161
Query: 222 EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
++I TPG++LD ++ + K VLDEAD +++ Q Q R+ LP + Q+
Sbjct: 162 VHLVIATPGRILDL-MEKGVAKMEHCKTLVLDEADKLLS-QDFQGILDRLINFLPKERQV 219
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
ML+SAT+ V F Q + P I L EE +L + Q+Y + +K ++ ++
Sbjct: 220 MLYSATFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQE-KQKVHCLNTLFRK 277
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ I Q++IFC++ + LA+K+++ G + + ++ R + FR+G
Sbjct: 278 LQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQG 329
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 366 (133.9 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 92/298 (30%), Positives = 155/298 (52%)
Query: 103 KTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLT 162
+TF L L LL+ + E+G+ P+ IQ ++ L+A +++ Q+Q+GTGKT AF L
Sbjct: 6 RTFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGK--DILGQAQTGTGKTGAFALP 63
Query: 163 MLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITE 222
+L++V S PQ+L LAPT ELA+Q+ E + K + + V G+++++ +
Sbjct: 64 LLNKVT-SQTTPQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALK 122
Query: 223 ---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
Q+I+GTPG+V+D ++ L ++ VLDEAD M+ G D I + P
Sbjct: 123 RGPQVIVGTPGRVMDH-MRRGTLKLETLQALVLDEADEMLK-MGFIDDIEWILEHTPPQR 180
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q+ LFSAT +++ A + N I + ++D+I+Q +V K EA+ +
Sbjct: 181 QLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQ-HNKLEALVRVL 239
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
V +IF TR + LAEK+ G L G++ + R +++ + G+ I
Sbjct: 240 EVENTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDI 297
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 96/300 (32%), Positives = 159/300 (53%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
+ +F AL+LKPELL + MGF + IQ +LP +L ++I Q ++G+GKTAAF
Sbjct: 2 NANSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKG--QDVIGQGKTGSGKTAAFG 59
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
L +LS +N Q L L PT ELA Q+ + +G+ I ++ V G +
Sbjct: 60 LGVLSNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGS 119
Query: 221 TEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I++GTPG++LD K R DLS++ VLDEAD M+ G Q+ I P+
Sbjct: 120 LEHGAHILVGTPGRILDHLSKDRI-DLSELNTLVLDEADRMLE-MGFQEALEAIIAAAPA 177
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
+ Q +LFSATY + + AQ + N L+IK++ ++ +I+Q++ + + EA+
Sbjct: 178 ERQTLLFSATYPASIEQIAQSVTRNALMIKVEATHDT-SSIRQYFYKVEGSAARDEALET 236
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+ +++FC+T++ +A+ + + G +V L G++ +R L +F I
Sbjct: 237 LLLHHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISI 296
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 357 (130.7 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/292 (29%), Positives = 157/292 (53%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE LK +LL+G+YE GF PS IQE ++P L +++A++++GTGKT AF + L
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGS--DILARAKNGTGKTGAFCIPTL 213
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITEQ 223
+++P Q + L PT ELA+Q +V ++ K++ + V G +L + ++ +
Sbjct: 214 EKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLK-IEVMVTTGGTSLRDDIMRLYQP 272
Query: 224 I--IIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
+ ++GTPG++LD K L + V+DEAD +++ + IQ LP QI
Sbjct: 273 VHLLVGTPGRILDLAKK-GVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQF-LPESRQI 330
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
++FSAT+ V F + P II L ++ +L + Q+Y + +K ++ ++
Sbjct: 331 LMFSATFPVTVKSFKDRYLKKPYIINLM-DQLTLMGVTQYYAFVEE-RQKVHCLNTLFSK 388
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ I Q++IFC++ LA+K+++ G + + ++ + R + FR G
Sbjct: 389 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNG 440
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 98/309 (31%), Positives = 173/309 (55%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
S + F L L PE+ + + E GF + IQ +LP LL ++ Q+Q+GTGKT AF
Sbjct: 7 SNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSK--DIAGQAQTGTGKTMAFL 64
Query: 161 LT----MLSRVNPS---IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGEN 213
+ +LS P + +P+ + +APT ELAIQI + + KH T L V GE+
Sbjct: 65 VATFNHLLSSSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKH-TRLKVGIVYGGES 123
Query: 214 LERNKKITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIR 270
+ +K+ +Q I+IGT G+++D+ ++ +L+ I+ VLDEAD M +D
Sbjct: 124 YDVQRKVLDQGVDILIGTTGRIIDY-VRQGIINLNAIQAVVLDEADRMFDLGFIKDIRF- 181
Query: 271 IQKRLPS-DCQI-MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNI 328
+ +R+P+ D ++ MLFSAT +V E A D + +P+ +++ EE++ NIK+ + +
Sbjct: 182 LFRRMPNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEE-IFYPSQ 240
Query: 329 DEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILD 388
++K + + +A++F +T+ + L + +G VGLL+G++ ++R+ IL+
Sbjct: 241 EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILE 300
Query: 389 RFREGEFKI 397
+F +G+ I
Sbjct: 301 QFTQGQLDI 309
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 98/309 (31%), Positives = 173/309 (55%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
S + F L L PE+ + + E GF + IQ +LP LL ++ Q+Q+GTGKT AF
Sbjct: 7 SNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSK--DIAGQAQTGTGKTMAFL 64
Query: 161 LT----MLSRVNPS---IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGEN 213
+ +LS P + +P+ + +APT ELAIQI + + KH T L V GE+
Sbjct: 65 VATFNHLLSSSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKH-TRLKVGIVYGGES 123
Query: 214 LERNKKITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIR 270
+ +K+ +Q I+IGT G+++D+ ++ +L+ I+ VLDEAD M +D
Sbjct: 124 YDVQRKVLDQGVDILIGTTGRIIDY-VRQGIINLNAIQAVVLDEADRMFDLGFIKDIRF- 181
Query: 271 IQKRLPS-DCQI-MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNI 328
+ +R+P+ D ++ MLFSAT +V E A D + +P+ +++ EE++ NIK+ + +
Sbjct: 182 LFRRMPNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEE-IFYPSQ 240
Query: 329 DEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILD 388
++K + + +A++F +T+ + L + +G VGLL+G++ ++R+ IL+
Sbjct: 241 EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILE 300
Query: 389 RFREGEFKI 397
+F +G+ I
Sbjct: 301 QFTQGQLDI 309
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 347 (127.2 bits), Expect = 5.3e-31, P = 5.3e-31
Identities = 102/348 (29%), Positives = 176/348 (50%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
++EE++ + V E ++++V E E + SP + +F+ L L +LKG
Sbjct: 91 EEEEEEEVEVPE---VKEVVEP---EDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKG 144
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRV--NPSIQEPQ 175
+ E+ F P+ IQ ++P L +++A +Q+G+GKT A+ + ++ R+ PS +
Sbjct: 145 IAELKFTKPTPIQSASIPIALLGK--DIVAGAQTGSGKTGAYMIPIIERLLYKPSTST-K 201
Query: 176 VLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL---ERNKKITEQIIIGTPGKV 232
V+ L PT ELA+Q+ E K+ H+ +L++ AV G NL E K I+I TPG++
Sbjct: 202 VIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRL 261
Query: 233 LDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC-QIMLFSATYDKE 291
+D F + I+V V+DEAD M+ +G QD I +P Q +LFSAT +
Sbjct: 262 IDHIRNSPSFSVQDIQVLVIDEADRMLE-EGFQDELTEILSLIPKHKRQTLLFSATMNTR 320
Query: 292 VMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVV--TIGQAMI 349
+ + Q + P+ I + + + Q +V + D+ A+ +Y ++ + ++
Sbjct: 321 IQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKPAL--LYQLLKGVSSRVVV 378
Query: 350 FCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
F ++TA L + GL V L G LT EQRL + F+ E +
Sbjct: 379 FVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPV 426
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 347 (127.2 bits), Expect = 5.3e-31, P = 5.3e-31
Identities = 102/348 (29%), Positives = 176/348 (50%)
Query: 58 KDEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKG 117
++EE++ + V E ++++V E E + SP + +F+ L L +LKG
Sbjct: 91 EEEEEEEVEVPE---VKEVVEP---EDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKG 144
Query: 118 VYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRV--NPSIQEPQ 175
+ E+ F P+ IQ ++P L +++A +Q+G+GKT A+ + ++ R+ PS +
Sbjct: 145 IAELKFTKPTPIQSASIPIALLGK--DIVAGAQTGSGKTGAYMIPIIERLLYKPSTST-K 201
Query: 176 VLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL---ERNKKITEQIIIGTPGKV 232
V+ L PT ELA+Q+ E K+ H+ +L++ AV G NL E K I+I TPG++
Sbjct: 202 VIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRL 261
Query: 233 LDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC-QIMLFSATYDKE 291
+D F + I+V V+DEAD M+ +G QD I +P Q +LFSAT +
Sbjct: 262 IDHIRNSPSFSVQDIQVLVIDEADRMLE-EGFQDELTEILSLIPKHKRQTLLFSATMNTR 320
Query: 292 VMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVV--TIGQAMI 349
+ + Q + P+ I + + + Q +V + D+ A+ +Y ++ + ++
Sbjct: 321 IQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKPAL--LYQLLKGVSSRVVV 378
Query: 350 FCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
F ++TA L + GL V L G LT EQRL + F+ E +
Sbjct: 379 FVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPV 426
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 95/302 (31%), Positives = 156/302 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L L LLK V + G+ PS IQ A+P +++ +++A +Q+GTGKTA FTL +L
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISG--RDVMAAAQTGTGKTAGFTLPLL 65
Query: 165 SRVNPS----IQEPQV--LCLAPTYELAIQIGEVVAKMGKHIT--DLSVRYAVR-GENLE 215
R++ S + V L L PT ELA QI E + GK++ + V V+ +
Sbjct: 66 QRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIA 125
Query: 216 RNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRL 275
R ++ + +++ TPG++LD R S+++VF+LDEAD M+ +D ++ L
Sbjct: 126 RLRQGVD-VLVATPGRLLDL-YNQRAVKFSQLEVFILDEADRMLDMGFIRDIK-KLMTAL 182
Query: 276 PSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAV 335
P D Q +LFSAT+ E+ A+ MV NPL I + E + + + Q ++ + K +
Sbjct: 183 PKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQ-WLTAVDKKRKPAVL 241
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
+++ Q ++F T+ A L + + EGL + G + R L F++G
Sbjct: 242 THLIKENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSV 301
Query: 396 KI 397
KI
Sbjct: 302 KI 303
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 93/299 (31%), Positives = 155/299 (51%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+K F L + + E G + IQE A+P +L+ ++I Q+++GTGKT AF L
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGK--DIIGQAKTGTGKTLAFVL 61
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLE---RNK 218
+L +++P + Q L +APT ELA+QI + KM D++V G+++ R
Sbjct: 62 PILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 219 KITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
K I++ TPG++LD ++ DLS + VLDEAD M+ D I P
Sbjct: 122 KGNTHIVVATPGRLLDH-IRRETIDLSNLSTIVLDEADQMLYFGFLYDIE-DILDETPGS 179
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE-KFEAVSN 337
Q MLFSAT K++ + A+ + P +I+++ EE ++D I+Q + + D K +A+
Sbjct: 180 KQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVI--ETTDRAKPDALRF 237
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ A+IFC T+ A+ L + + G N L G++ +R ++ FRE + +
Sbjct: 238 VMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQ 296
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 93/299 (31%), Positives = 155/299 (51%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+K F L + + E G + IQE A+P +L+ ++I Q+++GTGKT AF L
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGK--DIIGQAKTGTGKTLAFVL 61
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLE---RNK 218
+L +++P + Q L +APT ELA+QI + KM D++V G+++ R
Sbjct: 62 PILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 219 KITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
K I++ TPG++LD ++ DLS + VLDEAD M+ D I P
Sbjct: 122 KGNTHIVVATPGRLLDH-IRRETIDLSNLSTIVLDEADQMLYFGFLYDIE-DILDETPGS 179
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE-KFEAVSN 337
Q MLFSAT K++ + A+ + P +I+++ EE ++D I+Q + + D K +A+
Sbjct: 180 KQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVI--ETTDRAKPDALRF 237
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ A+IFC T+ A+ L + + G N L G++ +R ++ FRE + +
Sbjct: 238 VMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQ 296
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 95/332 (28%), Positives = 166/332 (50%)
Query: 83 ESKQELEIQRKDPH---SPLYSVK-TFEALH--------LKPELLKGVYEMGFYAPSKIQ 130
E +QE EIQ K P K T+ ++H LKPE+L+ + + GF PS++Q
Sbjct: 10 EEEQE-EIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQ 68
Query: 131 ETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIG 190
+P + +++ Q++SG GKTA F +T L ++ P E V+C+ T ELA QI
Sbjct: 69 HECIPQAILGM--DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQIS 126
Query: 191 EVVAKMGKHITDLSVRYAVRGENLERNK-KITEQ---IIIGTPGKVLDWGLKYRFFDLSK 246
+ + K++ + V G +++++ ++ I++GTPG++L + L K
Sbjct: 127 KEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKL-KLDK 185
Query: 247 IKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLII 306
+K FVLDE D MI + I K P Q+M+FSAT KE+ + + +P+ +
Sbjct: 186 VKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEV 245
Query: 307 KLKREEE-SLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMS 365
+ E + +L ++QHYV K EK + N+ + Q +IF K L + ++
Sbjct: 246 YVDDEAKLTLHGLQQHYVKLKEA-EKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLT 304
Query: 366 KEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
++ + ++ E+RLS F++ + +I
Sbjct: 305 EQNFPSIAIHRQMAQEERLSRYQAFKDFQKRI 336
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 91/299 (30%), Positives = 158/299 (52%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F AL L +L+ + E+G+ P+ IQ A+P +L +++A +Q+GTGKTAAF L +
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTK--QDVMAGAQTGTGKTAAFALPI 59
Query: 164 LSRVNPSIQEP------QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN 217
L + Q + L L PT ELA+Q+ + K K TD+ V A G ++E
Sbjct: 60 LQLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKG-TDIRVGIAYGGVSIEAQ 118
Query: 218 KKITE---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKR 274
+ + ++I TPG++LD L+ +L+++ V DEAD M+ G D + K+
Sbjct: 119 QAVFNAGIDVLIATPGRLLDH-LRQGALNLNQLNTLVFDEADRML-DMGFMDEIQAVLKQ 176
Query: 275 LPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEA 334
+P+ Q +LFSAT D + F+++++ +P I++ + + I+Q V + D K E
Sbjct: 177 VPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQR-VYAIDSDRKTEF 235
Query: 335 VSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
VS++ Q +IF T++ L +++K G+ G+L+ R +L F++G
Sbjct: 236 VSHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQG 294
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 94/301 (31%), Positives = 163/301 (54%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F L L L++ V ++G+ P+ IQ A+P +L ++IA +Q+GTGKTA+F L +
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQG--RDLIAAAQTGTGKTASFVLPI 59
Query: 164 LSRVNPSIQEPQ----VLCLAPTYELAIQIGEVVAKMGKH--ITDLSVRYAVRGENLERN 217
L ++ + + L L PT ELA+Q+ E V + GK + L+V V E ++
Sbjct: 60 LEKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGV-DEQAQKQ 118
Query: 218 KKITE-QIIIGTPGKVLD-WGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRL 275
+ I +++ TPG+++D +G + +F+ +I++ VLDEAD M+ G + +I L
Sbjct: 119 RLIDGVDVLVATPGRLMDLYGQRAVYFE--EIEMVVLDEADRML-DMGFIESINKIIDCL 175
Query: 276 PSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAV 335
PS+ Q +LFSAT ++V E A+ V +P I + + S NI Q +++ + D K +
Sbjct: 176 PSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQ-WLITVDKDTKSALL 234
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
S++ QA+IF T+ AA L ++ K G++ + R +L+ F+ G+
Sbjct: 235 SHLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294
Query: 396 K 396
K
Sbjct: 295 K 295
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 91/299 (30%), Positives = 158/299 (52%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F AL L +L+ + E+G+ P+ IQ A+P +L +++A +Q+GTGKTAAF L +
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTK--QDVMAGAQTGTGKTAAFALPI 59
Query: 164 LSRVNPSIQEP------QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN 217
L + Q + L L PT ELA+Q+ + K K TD+ V A G ++E
Sbjct: 60 LQLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKG-TDIRVGIAYGGVSIEAQ 118
Query: 218 KKITE---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKR 274
+ + ++I TPG++LD L+ +L+++ V DEAD M+ G D + K+
Sbjct: 119 QAVFNAGIDVLIATPGRLLDH-LRQGALNLNQLNTLVFDEADRML-DMGFMDEIQAVLKQ 176
Query: 275 LPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEA 334
+P+ Q +LFSAT D + F+++++ +P I++ + + I+Q V + D K E
Sbjct: 177 VPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQR-VYAIDSDRKTEF 235
Query: 335 VSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
VS++ Q +IF T++ L +++K G+ G+L+ R +L F++G
Sbjct: 236 VSHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQG 294
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 94/301 (31%), Positives = 163/301 (54%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F L L L++ V ++G+ P+ IQ A+P +L ++IA +Q+GTGKTA+F L +
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQG--RDLIAAAQTGTGKTASFVLPI 59
Query: 164 LSRVNPSIQEPQ----VLCLAPTYELAIQIGEVVAKMGKH--ITDLSVRYAVRGENLERN 217
L ++ + + L L PT ELA+Q+ E V + GK + L+V V E ++
Sbjct: 60 LEKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGV-DEQAQKQ 118
Query: 218 KKITE-QIIIGTPGKVLD-WGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRL 275
+ I +++ TPG+++D +G + +F+ +I++ VLDEAD M+ G + +I L
Sbjct: 119 RLIDGVDVLVATPGRLMDLYGQRAVYFE--EIEMVVLDEADRML-DMGFIESINKIIDCL 175
Query: 276 PSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAV 335
PS+ Q +LFSAT ++V E A+ V +P I + + S NI Q +++ + D K +
Sbjct: 176 PSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQ-WLITVDKDTKSALL 234
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
S++ QA+IF T+ AA L ++ K G++ + R +L+ F+ G+
Sbjct: 235 SHLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294
Query: 396 K 396
K
Sbjct: 295 K 295
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 86/291 (29%), Positives = 154/291 (52%)
Query: 108 LHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRV 167
+ LK ELL+G+Y GF PS IQ++A+ ++ QSQ+G+GKT + +L +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGK--DVTIQSQAGSGKTVISLIDILQGI 58
Query: 168 NPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRG-ENLERNKKITEQIII 226
+ QV+ LAP +A + E + +G++ L+V G + N KI+ +++
Sbjct: 59 DCEDAHLQVILLAPQRGMAQRAHEQLKSLGRN---LNVNATCLGFDTTAENDKISH-VLM 114
Query: 227 GTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSA 286
GTP L + D S+IK+FVLDEAD M++ +G +D + + +P D Q++L SA
Sbjct: 115 GTPKDFLS-NIPS---DTSRIKMFVLDEADEMLS-KGFKDQIYEVFRSMPQDVQVVLLSA 169
Query: 287 TYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQ 346
T EV++ + +P+ I +K++E +L+ I+Q Y+ + + KF + ++ Q
Sbjct: 170 TMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQ 229
Query: 347 AMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
A+IFC+TR+ L E++ + V G + +R ++ F ++
Sbjct: 230 ALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRV 280
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 345 (126.5 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 116/407 (28%), Positives = 186/407 (45%)
Query: 2 TSLSDWIAATKNTSALKPDDLIDVLSNVNLKQADTPSPTEXXXXXXXXXXXXXXGNKDEE 61
TSL D I K LK DD V + S ++EE
Sbjct: 86 TSLEDKINQRKTVKKLKADDDKSVTTKTTNNNKSKKSNNNDNDDDDEEVNEEEEEEEEEE 145
Query: 62 DKPLSVAEKSLLQKIVRRGLIESKQE------LEIQRKDPHSPLYSVKTFEALHLKPELL 115
D EK + +K ++ +KQ L+ RK + TFE LHL LL
Sbjct: 146 DNE---NEKEINKKQQQQQQQSNKQTTDKIKVLQSNRKLKKIVEEELPTFEELHLSRPLL 202
Query: 116 KGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRV---NPSIQ 172
K V ++GF P+ IQ A+P LA +++A + +G+GKTAAF L +L R+ + +
Sbjct: 203 KAVQKLGFSQPTPIQAKAIP--LALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYR 260
Query: 173 EPQVLCLAPTYELAIQIGEVVAKMGK--HITDLSVRYAVRGENLERNKKITEQIIIGTPG 230
+VL L PT ELA+Q V+ + + +IT + + + E + + ++I TPG
Sbjct: 261 AIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPG 320
Query: 231 KVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDK 290
+++D L L +++ +LDEAD ++ G +D +I + P++ Q MLFSAT +
Sbjct: 321 RLIDHLLNAHGIGLDDLEILILDEADRLL-DMGFKDEINKIVESCPTNRQTMLFSATLND 379
Query: 291 EVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKN---IDEKFEAVSNIYGVVTIGQA 347
EV A+ + P+ +++ + ++Q +V K D +S V G
Sbjct: 380 EVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQHLSDRPAILLSLCTRVFNQGGT 439
Query: 348 MIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGE 394
+IFC ++K L L L G L+ EQR L +FR+G+
Sbjct: 440 IIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQ 486
>TIGR_CMR|CPS_0174 [details] [associations]
symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
Length = 428
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 93/301 (30%), Positives = 158/301 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLT-- 162
F L+L P+++ G+ MGF + IQ +LP LL ++ Q+Q+G GKT AF
Sbjct: 11 FADLNLAPQVVTGLEAMGFDYCTSIQAKSLPVLLQGT--DLAGQAQTGEGKTIAFLAATF 68
Query: 163 --MLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
+L + P+ +P+ L +APT ELAIQI +M K T L + GE E +
Sbjct: 69 HHLLQKEAPTHNQPRALIMAPTRELAIQIHRDATEMAKS-TGLRLGVVYGGEGYESQRLE 127
Query: 221 TE---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
E I+IGT G+++D+ +K ++L I+V VLDEAD M +D K P+
Sbjct: 128 LEAGVDILIGTCGRLIDY-MKQGIYNLKNIEVIVLDEADRMFDLGFIKDIRYMFDKMPPA 186
Query: 278 DCQI-MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
++ MLFSAT V E A D + +P ++++ E+++ I + N ++K +
Sbjct: 187 TERLSMLFSATLSFRVKELAFDHMNDPTSVEVEPEQKTNSRISEELFYPSN-EDKMTLLQ 245
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ +A++F +T+ + + ++ + + VGLL+G++ ++RL IL+ F +G
Sbjct: 246 TLIEEDWPEKAIVFANTKHVCEKVFDHLNADKIRVGLLTGDVPQKKRLKILEEFTDGTVD 305
Query: 397 I 397
I
Sbjct: 306 I 306
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 89/299 (29%), Positives = 155/299 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F LKPELL+ + + GF PS++Q +P + ++I Q++SG GKTA F L+ L
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM--DVICQAKSGMGKTAVFVLSTL 105
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
++ PS + L L T ELA QI + ++ D V G N++ +K + +
Sbjct: 106 QQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNE 165
Query: 224 ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
I++GTPG+VL + + L ++ F+LDE D M+ + + I K P D Q
Sbjct: 166 CPHIVVGTPGRVLALA-REKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVMCKNIDEKFEAVSNIY 339
+M+FSAT KE+ + + +P+ I + E + +L + QHY+ + EK ++++
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEM-EKNRKLNDLL 283
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGL-NVGLLSGELTVEQRLSILDRFREGEFKI 397
+ Q +IF + AA L + + + ++ + SG ++ E+RL+ F+EG +I
Sbjct: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG-MSQEERLTRYKSFKEGHKRI 341
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 89/282 (31%), Positives = 153/282 (54%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L LK ELL+ + MG+ + IQ +LP +LA ++I Q ++G+GKTAAF L +L
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAG--EDVIGQGKTGSGKTAAFGLGLL 60
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
++++ Q L L PT ELA Q+ + + + + I ++ V G + E
Sbjct: 61 NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG 120
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
II+GTPG+++D L DLS + + VLDEAD M+ G Q I ++ P + Q
Sbjct: 121 AHIIVGTPGRIVDH-LDRNRLDLSNLNMLVLDEADRMLE-MGFQPQLDAIIEQSPRERQT 178
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT+ +++ A+ ++ NP+++K E + I+QH+ + + +A+ +
Sbjct: 179 LLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEK-NTIEQHFYQLDDDKSRMQALQLLLLE 237
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQR 383
A++FC+T++ +A+++ G +V L G+L EQR
Sbjct: 238 HKPESAVVFCNTKRETQKVADELEGLGFSVLALHGDL--EQR 277
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 89/282 (31%), Positives = 153/282 (54%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L LK ELL+ + MG+ + IQ +LP +LA ++I Q ++G+GKTAAF L +L
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAG--EDVIGQGKTGSGKTAAFGLGLL 60
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
++++ Q L L PT ELA Q+ + + + + I ++ V G + E
Sbjct: 61 NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG 120
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
II+GTPG+++D L DLS + + VLDEAD M+ G Q I ++ P + Q
Sbjct: 121 AHIIVGTPGRIVDH-LDRNRLDLSNLNMLVLDEADRMLE-MGFQPQLDAIIEQSPRERQT 178
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT+ +++ A+ ++ NP+++K E + I+QH+ + + +A+ +
Sbjct: 179 LLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEK-NTIEQHFYQLDDDKSRMQALQLLLLE 237
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQR 383
A++FC+T++ +A+++ G +V L G+L EQR
Sbjct: 238 HKPESAVVFCNTKRETQKVADELEGLGFSVLALHGDL--EQR 277
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 85/313 (27%), Positives = 166/313 (53%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ ++ V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 85/313 (27%), Positives = 166/313 (53%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ ++ V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 85/313 (27%), Positives = 166/313 (53%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ ++ V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 85/313 (27%), Positives = 166/313 (53%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ ++ V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 85/313 (27%), Positives = 166/313 (53%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ ++ V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 85/313 (27%), Positives = 166/313 (53%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ ++ V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 85/313 (27%), Positives = 165/313 (52%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 88/304 (28%), Positives = 168/304 (55%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L+L ++++GV + GF + IQE LP L ++ Q+Q+GTGKTAAF +++
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGK--DVAGQAQTGTGKTAAFLISLF 60
Query: 165 SRVNPS-----IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKK 219
+++ S + P+ + LAPT EL +QI + +G H +++ G + + K
Sbjct: 61 TKLLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHC-GFTIQAIYGGVDYMKQKN 119
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
++ +++GTPG+++D+ LK + + L +I++ V+DEAD M D +++ P
Sbjct: 120 ALKEGADVVVGTPGRLIDY-LKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPP 178
Query: 277 SDC-QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQ--HYVMCKNIDEKFE 333
D Q ++FSAT ++ VME A + + P + + E+ + + ++Q ++V K EKF
Sbjct: 179 YDKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRK---EKFP 235
Query: 334 AVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREG 393
+ + + + MIF +T++ A +L E+++ ++SG++ +RL IL+ F+ G
Sbjct: 236 LLLGLLRKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSG 295
Query: 394 EFKI 397
+ I
Sbjct: 296 KLPI 299
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 84/313 (26%), Positives = 164/313 (52%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 88
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 89 KSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFF 148
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ +++GTPG++L ++ R F L +K FVLDE D M+ +
Sbjct: 149 GGLSIKKDEEVLKKNCPHVVVGTPGRILAL-VRNRSFSLKNVKHFVLDECDKMLEQLDMR 207
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q M+FSAT K++ + + +P+ + + E + +L ++Q+YV
Sbjct: 208 RDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVK 267
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 268 LKD-SEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 326
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 327 SRYQQFKDFQRRI 339
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 332 (121.9 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 86/302 (28%), Positives = 154/302 (50%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L +LK V E G+ P+ IQ A+P +L +AQ+ GTGKTAAF L M
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQT--GTGKTAAFVLPM 62
Query: 164 LSRVNPS---IQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
+ R++ + P+ L L PT ELA Q+ E K GK++ L++ + G + + + +
Sbjct: 63 IQRLSTGRARARMPRCLILCPTRELAAQVAENFEKYGKYLK-LTMALLIGGVSFKEQETL 121
Query: 221 TEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
++ ++I TPG+++D + + + ++ ++DEAD M+ D +I +LP+
Sbjct: 122 LQRGVDVLIATPGRLMDQFDRGKLLMMG-VETLIIDEADRMLDMGFIPDIE-KICAKLPA 179
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFE--AV 335
+ Q +LFSAT+ ++ A+ +P I++ R ++ + I Q V D K A+
Sbjct: 180 NRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTAL 239
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
+ + ++FC+ + +A ++K G + + G+L R L RFR+G+
Sbjct: 240 RRVIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKL 299
Query: 396 KI 397
K+
Sbjct: 300 KL 301
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 87/318 (27%), Positives = 167/318 (52%)
Query: 89 EIQRKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMI 146
E +KD S+ + F LKPE+L+ + + GF PS++Q +P + +++
Sbjct: 25 EAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM--DIL 82
Query: 147 AQSQSGTGKTAAFTLTMLSRVNPSIQEP-QVLCLAPTYELAIQIGEVVAKMGKHITDLSV 205
Q++SG GKTA F L L ++ PS VL + T ELA QI + + K++ + V
Sbjct: 83 CQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKV 142
Query: 206 RYAVRGENLERNKKI----TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIAT 261
G ++++++ T I++GTPG++L ++ + +L +K FVLDE D M+
Sbjct: 143 AVFFGGMAIQKDEETLKSGTPHIVVGTPGRILAL-IRNKKLNLKLLKHFVLDECDKMLEQ 201
Query: 262 QGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQ 320
+ I + P Q+M+FSAT K++ + + +P+ + + E + +L ++Q
Sbjct: 202 LDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQ 261
Query: 321 HYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLN-VGLLSGELT 379
HYV K +EK + + + V+ Q +IF + + L++ ++++ +G+ G +T
Sbjct: 262 HYVNLKE-NEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRG-MT 319
Query: 380 VEQRLSILDRFREGEFKI 397
E+RL+ +F++ + +I
Sbjct: 320 QEERLNRYQQFKDFQKRI 337
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 84/313 (26%), Positives = 164/313 (52%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 88
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 89 KSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFF 148
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ +++GTPG++L ++ R +L +K FVLDE D M+ +
Sbjct: 149 GGLSIKKDEEVLKKNCPHVVVGTPGRILAL-VRNRSLNLKNVKHFVLDECDKMLEQLDMR 207
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q M+FSAT KE+ + + +P+ + + E + +L ++Q+YV
Sbjct: 208 RDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVK 267
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 268 LKD-SEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 326
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 327 SRYQQFKDFQRRI 339
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 84/313 (26%), Positives = 164/313 (52%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 79 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 136
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 137 KSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFF 196
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ +++GTPG++L ++ R +L +K FVLDE D M+ +
Sbjct: 197 GGLSIKKDEEVLKKNCPHVVVGTPGRILAL-VRNRSLNLKNVKHFVLDECDKMLEQLDMR 255
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q M+FSAT KE+ + + +P+ + + E + +L ++Q+YV
Sbjct: 256 RDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVK 315
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 316 LKD-SEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 374
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 375 SRYQQFKDFQRRI 387
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 93/297 (31%), Positives = 159/297 (53%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L L L+K V E+G+ +P+ IQ A+P++LA N++A +Q+GTGKTA+F L +L
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGK--NVLAAAQTGTGKTASFVLPLL 60
Query: 165 SRVN--PSIQEPQV--LCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRG-ENLERNKK 219
R P I+ +V + L PT ELA+Q+ + + + K++ L+ G + + K+
Sbjct: 61 HRFADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLP-LTAMAMYGGVDAAPQKKR 119
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ E +++ TPG++LD + R ++ V VLDEAD M+ +D + I+K LP
Sbjct: 120 LIEGVDLLVATPGRLLDMYTQ-RAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEK-LPE 177
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q +LFSAT K+V A+ +P+ + I++ R+ + I Q ++ + D K +S+
Sbjct: 178 QRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQ-WLTTVDKDRKSALLSH 236
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGE 394
+ QA+IF T+ AA L ++ K G+ + R +L F+ G+
Sbjct: 237 LIKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGK 293
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 93/297 (31%), Positives = 159/297 (53%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L L L+K V E+G+ +P+ IQ A+P++LA N++A +Q+GTGKTA+F L +L
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGK--NVLAAAQTGTGKTASFVLPLL 60
Query: 165 SRVN--PSIQEPQV--LCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRG-ENLERNKK 219
R P I+ +V + L PT ELA+Q+ + + + K++ L+ G + + K+
Sbjct: 61 HRFADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLP-LTAMAMYGGVDAAPQKKR 119
Query: 220 ITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ E +++ TPG++LD + R ++ V VLDEAD M+ +D + I+K LP
Sbjct: 120 LIEGVDLLVATPGRLLDMYTQ-RAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEK-LPE 177
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN 337
Q +LFSAT K+V A+ +P+ + I++ R+ + I Q ++ + D K +S+
Sbjct: 178 QRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQ-WLTTVDKDRKSALLSH 236
Query: 338 IYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGE 394
+ QA+IF T+ AA L ++ K G+ + R +L F+ G+
Sbjct: 237 LIKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGK 293
>UNIPROTKB|P0A8J8 [details] [associations]
symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
Uniprot:P0A8J8
Length = 421
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 96/302 (31%), Positives = 162/302 (53%)
Query: 107 ALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAF-TLT--- 162
ALH P++++ + + GF+ + IQ ALP LA ++ Q+Q+GTGKT AF T T
Sbjct: 15 ALH--PKVVEALEKKGFHNCTPIQALALPLTLAG--RDVAGQAQTGTGKTMAFLTSTFHY 70
Query: 163 MLSR---VNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKK 219
+LS + + +P+ L +APT ELA+QI + + T L + A G+ ++ K
Sbjct: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAE-ATGLKLGLAYGGDGYDKQLK 129
Query: 220 ITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ E I+IGT G+++D+ K +L I+V VLDEAD M +D ++ P
Sbjct: 130 VLESGVDILIGTTGRLIDYA-KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188
Query: 277 SDCQI-MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAV 335
++ ++ MLFSAT V E A + + N I+++ E+++ IK+ N +EK +
Sbjct: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN-EEKMRLL 247
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
+ +A+IF +T+ + ++ +G VGLL+G++ ++RL ILD F G+
Sbjct: 248 QTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDL 307
Query: 396 KI 397
I
Sbjct: 308 DI 309
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 85/313 (27%), Positives = 164/313 (52%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 89
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFF 149
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G +++++++ ++ I++GTPG++L + + +L IK F+LDE D M+ +
Sbjct: 150 GGLAVKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q+M+FSAT KE+ + + +P+ I + E + +L ++Q+YV
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ +EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 328 SRYQQFKDFQRRI 340
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 84/313 (26%), Positives = 164/313 (52%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DILCQA 88
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 89 KSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFF 148
Query: 210 RGENLERNKKITEQ----IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G ++++++++ ++ +++GTPG++L ++ R +L +K FVLDE D M+ +
Sbjct: 149 GGLSIKKDEEVLKRNCPHVVVGTPGRILAL-VRNRSLNLRNVKHFVLDECDKMLEQLDMR 207
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q M+FSAT KE+ + + +P+ + + E + +L ++Q+YV
Sbjct: 208 RDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVK 267
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 268 LKD-SEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 326
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 327 SRYQQFKDFQRRI 339
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 92/307 (29%), Positives = 160/307 (52%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
SV +F L + L + E+G+ +P+ +Q +P +L+ +++A + +G+GKTAAF
Sbjct: 7 SVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSG--RDVLAGANTGSGKTAAFA 64
Query: 161 LTMLSRVNPSIQEPQ----VLCLA--PTYELAIQIGEVVAKMGKHIT-DLSVRYAVRGE- 212
L +L R++ + + V CL PT ELA Q+ + H L + A G
Sbjct: 65 LPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVS 124
Query: 213 -NLE-RNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIR 270
NL+ ++ + +++ TPG++LD L L+++ FVLDEAD M++ G + +
Sbjct: 125 VNLQMQSLRAGADVLVATPGRLLDL-LASNALKLTQVSAFVLDEADRMLSL-GFTEELEQ 182
Query: 271 IQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE 330
+ LP Q +LFSAT+ +EV ++ PL L+ E+ES I+Q V+ N ++
Sbjct: 183 VLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQES--TIEQR-VITVNREQ 239
Query: 331 KFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
K ++++ QA+IF + T LA+K+SK G++ + G+ R +LD F
Sbjct: 240 KTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGF 299
Query: 391 REGEFKI 397
+ GE +
Sbjct: 300 KNGEISV 306
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 91/301 (30%), Positives = 157/301 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE L ELL + ++G+ P+ IQE +P + +++A + +GTGKTAAF L +
Sbjct: 15 FEQFDLDSELLASINKIGYTKPTSIQELVIPQAMVGK--DVLASAPTGTGKTAAFLLPIA 72
Query: 165 SRV--NPSIQE--PQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
+ P + P+VL L PT ELAIQIGE ++ + +T + G N + I
Sbjct: 73 QHLLDYPRTKPGFPRVLILTPTRELAIQIGEDSEQLTE-LTKIKTGVITGGVNYGSHADI 131
Query: 221 ---TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
T I++ TPG++L++ ++ FD +I++ VLDEAD M+ G + RI
Sbjct: 132 LTSTTDILVATPGRLLEY-IENEQFDAREIEILVLDEADRMLDL-GFSETINRIVAEARW 189
Query: 278 DCQIMLFSATYDKE-VMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
Q MLFSAT + V FA++++ P+ ++ K + I Q + + + K +
Sbjct: 190 RKQTMLFSATLESPGVQLFAEEVLNEPVFLESKPSRKEKAVIHQWLHLADDANHKLNLLV 249
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
N + + ++F + R+T +L+ K+ E L L G++ ++R ++RF++GE K
Sbjct: 250 NTLKQEGVERTVVFANKRETVQYLSGKLYAEELPCVWLEGKMPQDKRNKAIERFKKGEVK 309
Query: 397 I 397
+
Sbjct: 310 V 310
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 92/307 (29%), Positives = 160/307 (52%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
SV +F L + L + E+G+ +P+ +Q +P +L+ +++A + +G+GKTAAF
Sbjct: 7 SVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSG--RDVLAGANTGSGKTAAFA 64
Query: 161 LTMLSRVNPSIQEPQ----VLCLA--PTYELAIQIGEVVAKMGKHIT-DLSVRYAVRGE- 212
L +L R++ + + V CL PT ELA Q+ + H L + A G
Sbjct: 65 LPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVS 124
Query: 213 -NLE-RNKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIR 270
NL+ ++ + +++ TPG++LD L L+++ FVLDEAD M++ G + +
Sbjct: 125 VNLQMQSLRAGADVLVATPGRLLDL-LASNALKLTQVSAFVLDEADRMLSL-GFTEELEQ 182
Query: 271 IQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE 330
+ LP Q +LFSAT+ +EV ++ PL L+ E+ES I+Q V+ N ++
Sbjct: 183 VLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQES--TIEQR-VITVNREQ 239
Query: 331 KFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
K ++++ QA+IF + T LA+K+SK G++ + G+ R +LD F
Sbjct: 240 KTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGF 299
Query: 391 REGEFKI 397
+ GE +
Sbjct: 300 KNGEISV 306
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/313 (27%), Positives = 161/313 (51%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 88
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 89 KSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFF 148
Query: 210 RGENLERN----KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G +++++ KK +++GTPG++L ++ R +L +K FVLDE D M+ +
Sbjct: 149 GGLSIKKDEDVLKKNCPHVVVGTPGRILAL-VRSRSLNLRNVKHFVLDECDKMLEQLDMR 207
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q M+FSAT KE+ + + +P+ + + E + +L ++Q+YV
Sbjct: 208 RDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVK 267
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 268 LKD-SEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 326
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 327 SRYQQFKDFQRRI 339
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/313 (27%), Positives = 161/313 (51%)
Query: 92 RKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+KD S+ + F LKPELL+ + + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DVLCQA 88
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F L L ++ P + VL + T ELA QI + + K++ + V
Sbjct: 89 KSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFF 148
Query: 210 RGENLERN----KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQ 265
G +++++ KK +++GTPG++L ++ R +L +K FVLDE D M+ +
Sbjct: 149 GGLSIKKDEDVLKKNCPHVVVGTPGRILAL-VRSRSLNLRNVKHFVLDECDKMLEQLDMR 207
Query: 266 DFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVM 324
I + P + Q M+FSAT KE+ + + +P+ + + E + +L ++Q+YV
Sbjct: 208 RDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVK 267
Query: 325 CKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRL 384
K+ EK + ++ V+ Q +IF + + LA+ + ++ + + E+RL
Sbjct: 268 LKD-SEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 326
Query: 385 SILDRFREGEFKI 397
S +F++ + +I
Sbjct: 327 SRYQQFKDFQRRI 339
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 93/344 (27%), Positives = 171/344 (49%)
Query: 59 DEEDKPLSVAEKSLLQKIVRRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGV 118
D E++ L E Q V G K+E+ K + ++S F LKPELL+ +
Sbjct: 5 DVENELLDYEEDEEPQPTVDSGATTGKKEV----KGSYVSIHS-SGFRDFLLKPELLRAI 59
Query: 119 YEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLC 178
+ GF PS++Q +P + +++ Q++SG GKTA F L L ++ P + VL
Sbjct: 60 VDCGFEHPSEVQHECIPQAILGM--DILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLV 117
Query: 179 LAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN----KKITEQIIIGTPGKVLD 234
+ T ELA QI + + K+++ + G +++++ KK I++GTPG++L
Sbjct: 118 MCHTRELAFQISKEYERFSKYMSSVKCAAFFGGMSIKKDEDVLKKNCPHIVVGTPGRILA 177
Query: 235 WGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVME 294
+ + L +K FVLDE D M+ + I + P + Q M+FSAT KE+
Sbjct: 178 LS-RNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRP 236
Query: 295 FAQDMVPNPLIIKLKREEE-SLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHT 353
+ + +P+ + + E + +L ++Q+YV K+ EK + ++ V+ Q +IF +
Sbjct: 237 VCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKD-SEKNRKLFDLLDVLEFNQVVIFVKS 295
Query: 354 RKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
L++ + ++ + +T E+RLS +F++ + +I
Sbjct: 296 VPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRI 339
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 333 (122.3 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 84/297 (28%), Positives = 152/297 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F +L L P +L G+ GF+ PS +Q A+P L ++I Q++SGTGKT F+ L
Sbjct: 23 FGSLLLSPPVLAGLEAAGFHRPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 80
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNK-KITE- 222
+ QVL LAPT E+A+QI V+ +G + L + G L ++K ++ +
Sbjct: 81 DALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKKC 140
Query: 223 QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIM 282
I +G+PG++ ++ + + + I++F+LDEAD ++ Q+ I LP++ Q++
Sbjct: 141 HIAVGSPGRIKQL-IELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQML 199
Query: 283 LFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFEAV 335
SATY + + + P ++L + SL +KQ+Y + K +EK + +
Sbjct: 200 AVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHL 259
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
++ + QA++F + A LAE ++ G +SG + QRL + + ++
Sbjct: 260 QELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQ 316
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 95/303 (31%), Positives = 157/303 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L L+ + MGF P++IQ+ A+P +A H++IA S++G+GKT AF + L
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAG--HDLIASSKTGSGKTLAFIIPAL 60
Query: 165 SRVNP----SIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
R++ S ++P+V+ L PT ELA Q+ + + T + GEN K+
Sbjct: 61 QRLSKNRALSKRDPRVVILTPTRELAKQVFSQLRLFTAN-TQYKAVLILGGENFNDQVKV 119
Query: 221 TE---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ + I+ TPG++ D L F L+ +++ +LDEAD M+ ++ + +I K
Sbjct: 120 LQKEPEFIVATPGRLADH-LTQGHFHLNGLELLILDEADRMLDLGFSKELT-QINKAADH 177
Query: 278 -DCQIMLFSATYDK-EVMEFAQDMVPNPLIIKLKR-EEESLDNIKQHYVMCKNIDEKFEA 334
Q +LFSAT D +V EFA +++ P I + E +D K+ Y + N+ +K
Sbjct: 178 RKRQTLLFSATLDHAQVNEFATELLTKPKRIAINAGHSEHVDIAKRFY-LADNLTQKEAL 236
Query: 335 VSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGE 394
+ + Q +IF TR LA+ ++++ LN LSGEL QR I++ F +G+
Sbjct: 237 LQHFLVTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQRNQIMESFSKGQ 296
Query: 395 FKI 397
KI
Sbjct: 297 HKI 299
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 93/305 (30%), Positives = 156/305 (51%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+F L L +L + ++G+ P+ IQ+ A+P +LA ++IA +Q+GTGKTA+F L +
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGK--DIIAAAQTGTGKTASFVLPL 59
Query: 164 LSRVNPSIQEP---------QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL 214
L ++N +E + L L PT ELA+Q+ +++ K++ D+S G +
Sbjct: 60 LEQLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYL-DISSMAMYGGVDA 118
Query: 215 ERNKKIT---EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRI 271
+ K+ I++ TPG++LD R ++ + VLDEAD M+ G D +I
Sbjct: 119 QEQKQRLIWGVDILVATPGRLLDM-THQRVLHFDELDMLVLDEADRML-DMGFIDDINKI 176
Query: 272 QKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEK 331
+RLP Q +LFSAT +EV A+ + P+ I + ++ S I+Q V + K
Sbjct: 177 IERLPEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKAN-K 235
Query: 332 FEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFR 391
+S+I QA+IF T+ AA L ++ K G+ + + R IL+ F+
Sbjct: 236 SALLSHIITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFK 295
Query: 392 EGEFK 396
G+ K
Sbjct: 296 SGKIK 300
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 95/303 (31%), Positives = 157/303 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L L+ + MGF P++IQ+ A+P +A H++IA S++G+GKT AF + L
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAG--HDLIASSKTGSGKTLAFIIPAL 60
Query: 165 SRVNP----SIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
R++ S ++P+V+ L PT ELA Q+ + + T + GEN K+
Sbjct: 61 QRLSKNRALSKRDPRVVILTPTRELAKQVFSQLRLFTAN-TQYKAVLILGGENFNDQVKV 119
Query: 221 TE---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ + I+ TPG++ D L F L+ +++ +LDEAD M+ ++ + +I K
Sbjct: 120 LQKEPEFIVATPGRLADH-LTQGHFHLNGLELLILDEADRMLDLGFSKELT-QINKAADH 177
Query: 278 -DCQIMLFSATYDK-EVMEFAQDMVPNPLIIKLKR-EEESLDNIKQHYVMCKNIDEKFEA 334
Q +LFSAT D +V EFA +++ P I + E +D K+ Y + N+ +K
Sbjct: 178 RKRQTLLFSATLDHAQVNEFATELLTKPKRIAINAGHSEHVDIAKRFY-LADNLTQKEAL 236
Query: 335 VSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGE 394
+ + Q +IF TR LA+ ++++ LN LSGEL QR I++ F +G+
Sbjct: 237 LQHFLVTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQRNQIMESFSKGQ 296
Query: 395 FKI 397
KI
Sbjct: 297 HKI 299
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 90/296 (30%), Positives = 151/296 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F++ P + G+ G+ P+ IQ A+P ++A +++ +Q+GTGKTAAF L +L
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAG--RDVMGLAQTGTGKTAAFALPIL 60
Query: 165 SRVNPSIQ-EPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVR-YAVRGENLERNK-KIT 221
R+ + + L +APT ELA QI + +G+ SV Y G N + K K
Sbjct: 61 HRLQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAG 120
Query: 222 EQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
++++ PG++LD + DLS+++V VLDEAD M D R+ K LP Q
Sbjct: 121 AEVVVACPGRLLDH-IAQGTIDLSRLEVLVLDEADQMFDMGFLPDIR-RVLKHLPPRRQT 178
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT ++ AQD++ +P+ +++ ++ Y + +++ K + +
Sbjct: 179 LLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVTVAHALYPVEQHL--KTPLLLELLRH 236
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+IF T+ A L E++ K G L G L+ +R + LD FR+G F+I
Sbjct: 237 TDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQI 292
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 86/325 (26%), Positives = 168/325 (51%)
Query: 80 GLIESKQELEIQRKDPHSPLYSVKT--FEALHLKPELLKGVYEMGFYAPSKIQETALPTL 137
GL S + I+++ S+ + F LKPELL+ + + GF PS++Q +P
Sbjct: 27 GLGHSDGIISIRKEGVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQA 86
Query: 138 LADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMG 197
+ +++ Q++SG GKTA F L L ++ P + VL + T ELA QI + +
Sbjct: 87 ILGM--DVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFS 144
Query: 198 KHITDLSVRYAVRGENLERN----KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLD 253
K++ + V G +++++ KK + +++GTPG++L + + +L IK F+LD
Sbjct: 145 KYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVGTPGRILALS-RNKSLNLRHIKHFILD 203
Query: 254 EADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE 313
E D M+ + I + P + Q+M+FSAT KE+ + + +P+ I + E +
Sbjct: 204 ECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETK 263
Query: 314 -SLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVG 372
+L ++Q+YV K+ +EK + ++ V+ Q +IF + + LA+ + ++
Sbjct: 264 LTLHGLQQYYVKLKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAI 322
Query: 373 LLSGELTVEQRLSILDRFREGEFKI 397
+ + ++RL+ +F++ + +I
Sbjct: 323 AIHRAMPQDERLARYQQFKDFQRRI 347
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 334 (122.6 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 91/328 (27%), Positives = 167/328 (50%)
Query: 82 IESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADP 141
+++ EL+ + + + F +L L +L+G+ GF PS IQ A+P L
Sbjct: 33 VKAAHELQSRTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIP--LGRC 90
Query: 142 PHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHIT 201
++I Q++SGTGKT FT L + QVL LAPT E+A+QI VV +G +
Sbjct: 91 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 150
Query: 202 DLSVRYAVRGENLERNKKITEQ--IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMI 259
L + G + ++K+ ++ I IG+PG++ ++ +S I++FVLDEAD ++
Sbjct: 151 GLECHVFIGGRPISQDKQHLKKCHIAIGSPGRIKQL-IEMGALMVSSIRLFVLDEADKLL 209
Query: 260 ATQGHQDFSIRIQ---KRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLD 316
F +I LP++ Q++ SATY + + + + P ++L + L
Sbjct: 210 EDDSSSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLL 269
Query: 317 NIKQHYVMC-------KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGL 369
+KQ+Y + K +EK +++ ++ + QA++F + A LA+ +S +GL
Sbjct: 270 GLKQYYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGL 329
Query: 370 NVGLLSGELTVEQRLSILDRFREGEFKI 397
+SG L+ +QRL + + ++ + ++
Sbjct: 330 PAVCISGGLSQDQRLEAMWKLKQYQCRV 357
>TIGR_CMR|BA_2109 [details] [associations]
symbol:BA_2109 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:MMAINTI HSSP:P10081 HOGENOM:HOG000268811
RefSeq:NP_844507.1 RefSeq:YP_018751.1 RefSeq:YP_028224.1
ProteinModelPortal:Q81RE0 DNASU:1085806
EnsemblBacteria:EBBACT00000011412 EnsemblBacteria:EBBACT00000014072
EnsemblBacteria:EBBACT00000023039 GeneID:1085806 GeneID:2818618
GeneID:2851363 KEGG:ban:BA_2109 KEGG:bar:GBAA_2109 KEGG:bat:BAS1961
ProtClustDB:CLSK886848 BioCyc:BANT260799:GJAJ-2029-MONOMER
BioCyc:BANT261594:GJ7F-2106-MONOMER Uniprot:Q81RE0
Length = 389
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 85/291 (29%), Positives = 160/291 (54%)
Query: 110 LKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRVNP 169
++P L + + GF ++IQ+ A+PT+L ++IA+S +GTGKT A+ L +L ++NP
Sbjct: 5 MQPFLQQAWEKAGFKELTEIQKQAIPTILEG--QDVIAESPTGTGKTLAYLLPLLHKINP 62
Query: 170 SIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN-KKITE--QIII 226
+++PQV+ LAPT EL +QI E V K T++S + G +++R +K+ + ++I+
Sbjct: 63 EVKQPQVVVLAPTRELVMQIHEEVQKFTAG-TEISGASLIGGADIKRQVEKLKKHPRVIV 121
Query: 227 GTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSA 286
G+PG++L+ ++ + + ++K V DE D I Q + K D Q++ FSA
Sbjct: 122 GSPGRILEL-IRMKKLKMHEVKTIVFDEFD-QIVKQKMMGAVQDVIKSTMRDRQLVFFSA 179
Query: 287 TYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQ 346
T K + A+D+ P ++++ R E S ++ Y++C+ EK + V I + + +
Sbjct: 180 TMTKAAEDAARDLAVEPQLVRVTRAE-SKSLVEHTYIICER-REKNDYVRRIMHMGDV-K 236
Query: 347 AMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
A+ F + + EK+ + L E + ++R + + FR G+ +I
Sbjct: 237 AVAFLNDPFRLDEITEKLKFRKMKAAALHAEASKQEREATMRAFRGGKLEI 287
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 96/301 (31%), Positives = 159/301 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F +L L +LK + E G+ PS IQ A+P +LA +++A +Q+GTGKTA FTL +L
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGK--DVMAAAQTGTGKTAGFTLPIL 60
Query: 165 SRV--NPSIQEPQV--LCLAPTYELAIQIGEVVAKMGKHITDLS--VRYAVR-GENLERN 217
+ P ++ QV L L PT ELA QI + V G+H+ S V V+ ++R
Sbjct: 61 ELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRM 120
Query: 218 KKITEQIIIGTPGKVLD-WGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
K + I++ TPG+++D + FD ++++ VLDEAD M+ +D +I K LP
Sbjct: 121 CKGAD-ILVATPGRLMDLYNQNAVKFD--QLEILVLDEADRMLDMGFIRDIH-KILKLLP 176
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
Q +LFSAT+ E+ E A+ +V NP+ I + + ++Q + ++ +K + +
Sbjct: 177 EKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDMLV 235
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ Q ++F T+ A LA ++++GL + G + R L F+ GE +
Sbjct: 236 KLVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVR 295
Query: 397 I 397
I
Sbjct: 296 I 296
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 96/301 (31%), Positives = 159/301 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F +L L +LK + E G+ PS IQ A+P +LA +++A +Q+GTGKTA FTL +L
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGK--DVMAAAQTGTGKTAGFTLPIL 60
Query: 165 SRV--NPSIQEPQV--LCLAPTYELAIQIGEVVAKMGKHITDLS--VRYAVR-GENLERN 217
+ P ++ QV L L PT ELA QI + V G+H+ S V V+ ++R
Sbjct: 61 ELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRM 120
Query: 218 KKITEQIIIGTPGKVLD-WGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
K + I++ TPG+++D + FD ++++ VLDEAD M+ +D +I K LP
Sbjct: 121 CKGAD-ILVATPGRLMDLYNQNAVKFD--QLEILVLDEADRMLDMGFIRDIH-KILKLLP 176
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
Q +LFSAT+ E+ E A+ +V NP+ I + + ++Q + ++ +K + +
Sbjct: 177 EKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDMLV 235
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ Q ++F T+ A LA ++++GL + G + R L F+ GE +
Sbjct: 236 KLVKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVR 295
Query: 397 I 397
I
Sbjct: 296 I 296
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 322 (118.4 bits), Expect = 7.4e-29, P = 7.4e-29
Identities = 84/300 (28%), Positives = 152/300 (50%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
S K+F L E+ + + +G+ P+++Q +P L +++ +SQ+G+GKTA+F
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKK--DLVVKSQTGSGKTASFG 59
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMG--KHITDLSV--RYAVRGENLER 216
+ + V +PQ L L PT ELA+Q+ E + +G K I ++ + + LE
Sbjct: 60 IPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLEL 119
Query: 217 NKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+K I++GTPG+VLD ++ L ++K V+DEAD M+ G D I LP
Sbjct: 120 KQKT--HIVVGTPGRVLDH-IEKGTLSLERLKYLVIDEADEML-NMGFIDQVEAIIDELP 175
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+ MLFSAT ++V ++ + P I++K + D I +H + +EK +
Sbjct: 176 TKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKI-EHTLFEVREEEKLSLLK 234
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++ + +IFC T++ + ++ + + G + E R ++D FR+G+F+
Sbjct: 235 DVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFR 294
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 322 (118.4 bits), Expect = 7.4e-29, P = 7.4e-29
Identities = 84/300 (28%), Positives = 152/300 (50%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
S K+F L E+ + + +G+ P+++Q +P L +++ +SQ+G+GKTA+F
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKK--DLVVKSQTGSGKTASFG 59
Query: 161 LTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMG--KHITDLSV--RYAVRGENLER 216
+ + V +PQ L L PT ELA+Q+ E + +G K I ++ + + LE
Sbjct: 60 IPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLEL 119
Query: 217 NKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+K I++GTPG+VLD ++ L ++K V+DEAD M+ G D I LP
Sbjct: 120 KQKT--HIVVGTPGRVLDH-IEKGTLSLERLKYLVIDEADEML-NMGFIDQVEAIIDELP 175
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+ MLFSAT ++V ++ + P I++K + D I +H + +EK +
Sbjct: 176 TKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKI-EHTLFEVREEEKLSLLK 234
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++ + +IFC T++ + ++ + + G + E R ++D FR+G+F+
Sbjct: 235 DVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFR 294
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 95/301 (31%), Positives = 150/301 (49%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L LL+ + MG P+ IQE ALP LA +++A S++G+GKT AF L L
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGK--DLMASSKTGSGKTLAFLLPAL 60
Query: 165 SRVNP----SIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKK 219
RV S ++P+VL L PT ELA Q+ + + + T + GEN ++ K
Sbjct: 61 QRVISTRALSKRDPRVLILLPTRELAHQVYSQLRLLVAN-TQYKAISVLGGENFNDQAKA 119
Query: 220 ITEQ--IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ ++ I+ TPG++ D L+ + L+ +++ +LDEAD M+ +
Sbjct: 120 LAKEPHFIVATPGRIADH-LEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADHK 178
Query: 278 DCQIMLFSATYD-KEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
Q ++FSAT D E+ E A ++ NPL + + +I Q +C ++D K +S
Sbjct: 179 RRQTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRIYLCDHLDHKEALLS 238
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ + Q +IF TR LA K+S +G LSGEL R I+D+F G+ +
Sbjct: 239 RLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQQQ 298
Query: 397 I 397
I
Sbjct: 299 I 299
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 93/308 (30%), Positives = 158/308 (51%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+KTF L L P LL+ + EMGF P+++Q A+P L +++A + +GTGKTAAF +
Sbjct: 2 IKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDG--RDVLASAPTGTGKTAAFVI 59
Query: 162 TMLSRVN--PSIQE-P-QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN 217
L + P + P ++L L PT ELA+Q+ E + K+ T L++ G + +
Sbjct: 60 PALQYLLDFPRRKAGPARILILTPTRELAMQVAEQAQALAKN-TRLNIFTITGGVQYQEH 118
Query: 218 KKI---TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKR 274
I T+ I++ TPG++L++ + FD I+ +LDEAD M+ F + R
Sbjct: 119 ADILATTQDIVVATPGRLLEY-IDAERFDCRAIEWLILDEADRML----DMGFGPTVD-R 172
Query: 275 LPSDC----QIMLFSATYDKEVME-FAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNID 329
L ++C Q +LFSAT + +E F D++ +P + + I Q Y ++
Sbjct: 173 LSTECRWRKQTLLFSATLEGRGVEGFTADLLKDPAHVDAEPPRRERKKISQWYHRADDMP 232
Query: 330 EKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDR 389
K E + I ++++F TR+ A L ++ K + + GE+ ++R + + R
Sbjct: 233 HKVELLKKIL-TEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISR 291
Query: 390 FREGEFKI 397
FREG+ I
Sbjct: 292 FREGDVNI 299
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 95/301 (31%), Positives = 150/301 (49%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F L LL+ + MG P+ IQE ALP LA +++A S++G+GKT AF L L
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGK--DLMASSKTGSGKTLAFLLPAL 60
Query: 165 SRVNP----SIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENL-ERNKK 219
RV S ++P+VL L PT ELA Q+ + + + T + GEN ++ K
Sbjct: 61 QRVISTRALSKRDPRVLILLPTRELAHQVYSQLRLLVAN-TQYKAISVLGGENFNDQAKA 119
Query: 220 ITEQ--IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
+ ++ I+ TPG++ D L+ + L+ +++ +LDEAD M+ +
Sbjct: 120 LAKEPHFIVATPGRIADH-LEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADHK 178
Query: 278 DCQIMLFSATYD-KEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
Q ++FSAT D E+ E A ++ NPL + + +I Q +C ++D K +S
Sbjct: 179 RRQTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRIYLCDHLDHKEALLS 238
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ + Q +IF TR LA K+S +G LSGEL R I+D+F G+ +
Sbjct: 239 RLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQQQ 298
Query: 397 I 397
I
Sbjct: 299 I 299
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 93/308 (30%), Positives = 158/308 (51%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
+KTF L L P LL+ + EMGF P+++Q A+P L +++A + +GTGKTAAF +
Sbjct: 2 IKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDG--RDVLASAPTGTGKTAAFVI 59
Query: 162 TMLSRVN--PSIQE-P-QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN 217
L + P + P ++L L PT ELA+Q+ E + K+ T L++ G + +
Sbjct: 60 PALQYLLDFPRRKAGPARILILTPTRELAMQVAEQAQALAKN-TRLNIFTITGGVQYQEH 118
Query: 218 KKI---TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKR 274
I T+ I++ TPG++L++ + FD I+ +LDEAD M+ F + R
Sbjct: 119 ADILATTQDIVVATPGRLLEY-IDAERFDCRAIEWLILDEADRML----DMGFGPTVD-R 172
Query: 275 LPSDC----QIMLFSATYDKEVME-FAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNID 329
L ++C Q +LFSAT + +E F D++ +P + + I Q Y ++
Sbjct: 173 LSTECRWRKQTLLFSATLEGRGVEGFTADLLKDPAHVDAEPPRRERKKISQWYHRADDMP 232
Query: 330 EKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDR 389
K E + I ++++F TR+ A L ++ K + + GE+ ++R + + R
Sbjct: 233 HKVELLKKIL-TEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISR 291
Query: 390 FREGEFKI 397
FREG+ I
Sbjct: 292 FREGDVNI 299
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 94/303 (31%), Positives = 153/303 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE+ PE+L+ + + G+ + IQ+ A+P + +++A +Q+GTGKTAAF L +L
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRG--QDVLASAQTGTGKTAAFALPIL 60
Query: 165 SRV--NPSI---QEPQVLCLAPTYELAIQIGEVVAKMGKHI--TDLSVRYAVRGENLERN 217
++ NPS +VL L PT ELA Q+ E V K++ + L++ V+ E +
Sbjct: 61 QKMVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQK 120
Query: 218 KKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
K II+ TPG++L+ L LS + VLDEAD M+ FS IQK L +
Sbjct: 121 LKRGADIIVATPGRLLEH-LTACNLSLSSVDFLVLDEADRML----DMGFSADIQKILQA 175
Query: 278 ---DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEA 334
Q +LFSAT+ V + A +M+ P +I ++ + D + Q V K E
Sbjct: 176 VNKKRQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQ-VVYPVEQRRKREL 234
Query: 335 VSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGE 394
+S + G Q ++F TR A L ++++ +G+ ++ GE R L F G+
Sbjct: 235 LSELIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGK 294
Query: 395 FKI 397
++
Sbjct: 295 VRV 297
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 91/313 (29%), Positives = 161/313 (51%)
Query: 90 IQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQS 149
+ +K + ++S F LKPELL+ + + GF PS++Q+T +P + ++I Q+
Sbjct: 40 VDKKGSYVGIHSTG-FRDFLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGG--DIICQA 96
Query: 150 QSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+SG GKTA F LT L +V P E VL + T ELA QI + K++ D+
Sbjct: 97 KSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFF 156
Query: 210 RGENLER------NKKITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMI-ATQ 262
G +++ NK+ II+GTPG+ L+ ++ +F LS +++FVLDE D M+
Sbjct: 157 GGTPIQKDAELLKNKETHPHIIVGTPGR-LNALVRDKFLRLSSVRIFVLDECDKMLDQID 215
Query: 263 GHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQH 321
+D I + P Q+M+FSAT E+ + + NP + + + +L ++Q+
Sbjct: 216 MRRDVQ-EIFRATPQQKQVMMFSATLSDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQY 274
Query: 322 YVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGL--NVGLLSGELT 379
+V + EK ++ + + Q +IF + A L +K+ +E ++ + SG ++
Sbjct: 275 FVALEE-KEKNRKLNELLDDLQFNQVIIFVKSTLRATEL-DKLLRECNFPSIAVHSG-VS 331
Query: 380 VEQRLSILDRFRE 392
E+R+ F+E
Sbjct: 332 QEERIRRYKEFKE 344
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 81/298 (27%), Positives = 155/298 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F LKPELL+ + + GF PS++Q +P + +++ Q++SG GKTA F L L
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM--DILCQAKSGMGKTAVFVLATL 103
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERN----KKI 220
++ P + VL + T ELA QI + + K++ + V G +++++ KK
Sbjct: 104 QQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKS 163
Query: 221 TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
I++GTPG++L ++ + +L +K FVLDE D M+ + I + P + Q
Sbjct: 164 CPHIVVGTPGRILAL-VRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQ 222
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVMCKNIDEKFEAVSNIY 339
M+FSAT KE+ + + +P+ + + E + +L ++Q+Y K+ +EK + ++
Sbjct: 223 CMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKD-NEKNRKLFDLL 281
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
V+ Q +IF + + L++ + ++ + + E+RLS +F++ + +I
Sbjct: 282 DVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRI 339
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 325 (119.5 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 108/356 (30%), Positives = 176/356 (49%)
Query: 56 GNKDEEDKP-LSVAEKSLLQKI--VRRGLIESKQELEIQRKD--PHSPLYSVK-TFEALH 109
G+ D++D+ S A++ +L+K +R + K+++ + + Y TF ++
Sbjct: 148 GDDDDDDEDEFSSADEEVLKKADTLREKQKKGKRKMADTTEGFFEDASQYDENLTFHDMN 207
Query: 110 LKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRV-- 167
L LLK + MGF P+ IQ+ +P L ++ A + +GTGKTAAF L +L R+
Sbjct: 208 LSRPLLKAISTMGFKQPTPIQKACVPVGLLGK--DICACAATGTGKTAAFMLPVLERLIY 265
Query: 168 NP-SIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNK---KITEQ 223
P Q +VL L PT EL IQ+ VA+ T +S AV G +L+ + +
Sbjct: 266 KPRETQVTRVLVLVPTRELGIQV-HTVARQLAQFTTISTCLAVGGLDLKSQEAALRAGPD 324
Query: 224 IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIML 283
++I TPG+++D F+LS+I++ +LDEAD M+ + I + Q ML
Sbjct: 325 VLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMK-EIIRMCAYQRQTML 383
Query: 284 FSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCK-NIDEKFEAVSNIYGVV 342
FSAT +EV + A + P+ I + + ++Q +V + N + EA+
Sbjct: 384 FSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAIVAALLTR 443
Query: 343 TI-GQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
T M+F T+K A + + GL VG L G L+ QRL L RF++ + I
Sbjct: 444 TFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDI 499
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 325 (119.5 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 84/296 (28%), Positives = 150/296 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE+L L +L G+ GF PS +Q A+P L ++I Q++SGTGKT F+ L
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 123
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+ Q Q+L LAPT E+A+QI V+ +G + L + G L ++K ++
Sbjct: 124 DSLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 183
Query: 224 -IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIM 282
I +G+PG++ ++ + + I++F+LDEAD ++ Q+ I LP+ Q++
Sbjct: 184 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 242
Query: 283 LFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFEAV 335
SATY + + + +P ++L + SL +KQ+Y + K +EK + +
Sbjct: 243 AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHL 302
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFR 391
++ + QA++F + A LA+ +S +G +SG + QRL + + +
Sbjct: 303 QELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLK 358
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 325 (119.5 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 84/296 (28%), Positives = 150/296 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE+L L +L G+ GF PS +Q A+P L ++I Q++SGTGKT F+ L
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 123
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+ Q Q+L LAPT E+A+QI V+ +G + L + G L ++K ++
Sbjct: 124 DSLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 183
Query: 224 -IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIM 282
I +G+PG++ ++ + + I++F+LDEAD ++ Q+ I LP+ Q++
Sbjct: 184 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 242
Query: 283 LFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFEAV 335
SATY + + + +P ++L + SL +KQ+Y + K +EK + +
Sbjct: 243 AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHL 302
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFR 391
++ + QA++F + A LA+ +S +G +SG + QRL + + +
Sbjct: 303 QELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLK 358
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 325 (119.5 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 84/297 (28%), Positives = 151/297 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE+L L +L+G+ GF PS +Q A+P L ++I Q++SGTGKT F+ L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 122
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+ Q+L LAPT E+A+QI V+ +G + L + G L ++K ++
Sbjct: 123 DSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 182
Query: 224 -IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIM 282
I +G+PG++ ++ + + I++F+LDEAD ++ Q+ I LP+ Q++
Sbjct: 183 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 241
Query: 283 LFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFEAV 335
SATY + + + +P ++L + SL +KQ+Y + K +EK + +
Sbjct: 242 AVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHL 301
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
++ V QA++F + A LA+ +S +G +SG + QRL + + ++
Sbjct: 302 QELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQ 358
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 317 (116.6 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 93/322 (28%), Positives = 161/322 (50%)
Query: 78 RRGLIESKQELEIQRKDPHSPLYSVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTL 137
++ L + K E KD + K+F L + L +G+ PSKIQ+ ALP
Sbjct: 20 KKNLTKKKVVTEEIEKDDEEDVKE-KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHA 78
Query: 138 LADPPHNMIAQSQSGTGKTAAFTLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMG 197
L ++I +++G+GKT AF + +L + Q L L PT ELA QIG+ +G
Sbjct: 79 LQGK--DVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALG 136
Query: 198 KHITDLSVRYAVRGENLERNKKITEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDE 254
I L V G ++ + II+ TPG+++D + F+L +K ++DE
Sbjct: 137 SGI-GLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDE 195
Query: 255 ADVMIATQGHQDFSIRIQKRL---PSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKRE 311
AD ++ + DF + + K L P + + LFSAT K+V + + + +P + +
Sbjct: 196 ADRIL----NMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSR 251
Query: 312 EESLDNIKQHYVMCKNIDEKFEAVSNIYGVVT-IGQ-AMIFCHTRKTAAWLAEKMSKEGL 369
+++DN+KQHY+ N K++ +Y + G A++FC T T +A + + G+
Sbjct: 252 YKTVDNLKQHYIFVPN---KYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGM 308
Query: 370 NVGLLSGELTVEQRLSILDRFR 391
L G+++ E+RL L++F+
Sbjct: 309 QAVPLHGQMSQEKRLGSLNKFK 330
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 320 (117.7 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 87/297 (29%), Positives = 149/297 (50%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
+FE+ + P ++ GV G+ P+ IQ A+P +L H++I +Q+GTGKTAA+ L +
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEG--HDVIGLAQTGTGKTAAYALPV 59
Query: 164 LSRVNPSIQ-EPQVLCLAPTYELAIQIGEVVAKMGKH--ITDLSVRYAVRGENLERNKKI 220
+ ++ + + + L LAPT ELA QI E +G+ I + S+ V + R +
Sbjct: 60 IQKMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRS 119
Query: 221 TEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
+++ PG++LD + D+ ++ ++DEAD M G Q I K L Q
Sbjct: 120 GVDVVVACPGRLLDH-IWRGTIDICGVETLIIDEADRMF-DMGFQPDIQSILKCLVQPHQ 177
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYG 340
+LFSAT EV + + NP+ I++ + + ++ KN +K + I
Sbjct: 178 TLLFSATMPPEVRKLTLETQTNPVTIQIGTQAPA-SSVSHSVYPVKN-HQKTPLLIEILK 235
Query: 341 VVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
+IF T+ A LA+++S+ G L G L+ +R ++++ FR G FKI
Sbjct: 236 TTETKSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKI 292
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 315 (115.9 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 83/289 (28%), Positives = 149/289 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F +L LK +L+K + +G+ + IQ LP LL ++I ++++G+GKTAAF L +L
Sbjct: 12 FSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGK--DVIGEAKTGSGKTAAFGLALL 69
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+++ Q + + PT ELA Q+ + + K+ + I ++ + G E
Sbjct: 70 NKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHG 129
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
+I+GTPG++ + +K L + + VLDEAD M+ G Q I R P D Q
Sbjct: 130 AHVIVGTPGRLEEHVIKGTL-QLDNLNLLVLDEADRMLE-MGFQAALDNIVGRTPLDRQT 187
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT+ ++ ++ ++ +P+++K+ E+ I Q + N D++ +A+ +
Sbjct: 188 LLFSATFPDQIKSISESIMTDPVMVKIASSEDQ-STISQKFFKVGNDDDRLDALRLLLLG 246
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
+ IFC+T+K +A+ + +G +V L G+L R L RF
Sbjct: 247 NQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRF 295
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 315 (115.9 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 83/289 (28%), Positives = 149/289 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F +L LK +L+K + +G+ + IQ LP LL ++I ++++G+GKTAAF L +L
Sbjct: 12 FSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGK--DVIGEAKTGSGKTAAFGLALL 69
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+++ Q + + PT ELA Q+ + + K+ + I ++ + G E
Sbjct: 70 NKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHG 129
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
+I+GTPG++ + +K L + + VLDEAD M+ G Q I R P D Q
Sbjct: 130 AHVIVGTPGRLEEHVIKGTL-QLDNLNLLVLDEADRMLE-MGFQAALDNIVGRTPLDRQT 187
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGV 341
+LFSAT+ ++ ++ ++ +P+++K+ E+ I Q + N D++ +A+ +
Sbjct: 188 LLFSATFPDQIKSISESIMTDPVMVKIASSEDQ-STISQKFFKVGNDDDRLDALRLLLLG 246
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
+ IFC+T+K +A+ + +G +V L G+L R L RF
Sbjct: 247 NQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRF 295
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 324 (119.1 bits), Expect = 4.0e-28, P = 4.0e-28
Identities = 85/298 (28%), Positives = 154/298 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAF-TLTM 163
FE+L L +L+G+ GF PS +Q A+P L ++I Q++SGTGKT F T+ +
Sbjct: 71 FESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 128
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
S V ++ Q+L LAPT E+A+QI V+ +G + L + G L ++K ++
Sbjct: 129 DSLVLENLST-QILILAPTREIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRLKK 187
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
I +G+PG++ ++ + + I++F+LDEAD ++ Q+ I LP+ Q+
Sbjct: 188 CHIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQM 246
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFEA 334
+ SATY + + + P ++L + SL +KQ+Y + K +EK +
Sbjct: 247 LAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQH 306
Query: 335 VSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
+ ++ + QA++F + A LA+ +S +G +SG + QRL + + ++
Sbjct: 307 LQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAVCISGNMNQNQRLDAMAKLKQ 364
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 323 (118.8 bits), Expect = 5.1e-28, P = 5.1e-28
Identities = 89/322 (27%), Positives = 163/322 (50%)
Query: 81 LIESKQELEIQRKDPHSPLYSVKT-FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLA 139
++ + Q+L R L + FE+L L +L+G+ GF PS +Q A+P L
Sbjct: 39 ILRTAQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LG 96
Query: 140 DPPHNMIAQSQSGTGKTAAF-TLTMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGK 198
++I Q++SGTGKT F T+ + S V ++ Q+L LAPT E+A+QI V+ +G
Sbjct: 97 RCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLST-QILILAPTREIAVQIHSVITAIGI 155
Query: 199 HITDLSVRYAVRGENLERNKKITEQ--IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD 256
+ L + G L ++K ++ I +G+PG++ ++ + + I++F+LDEAD
Sbjct: 156 KMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQL-IELDYLNPGSIRLFILDEAD 214
Query: 257 VMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLD 316
++ Q+ I LP+ Q++ SATY + + + +P ++L + SL
Sbjct: 215 KLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLI 274
Query: 317 NIKQHYVMC-------KNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGL 369
+KQ+Y + K +EK + + ++ + QA++F + A LA+ +S +G
Sbjct: 275 GLKQYYKVVNSYPLAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGF 334
Query: 370 NVGLLSGELTVEQRLSILDRFR 391
+SG + QRL + + +
Sbjct: 335 PAECISGNMNQNQRLDAMAKLK 356
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 323 (118.8 bits), Expect = 5.1e-28, P = 5.1e-28
Identities = 83/297 (27%), Positives = 151/297 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
FE+L L +L+G+ GF PS +Q A+P L ++I Q++SGTGKT F+ L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ- 223
+ Q+L LAPT E+A+QI V+ +G + L + G L ++K ++
Sbjct: 122 DSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 181
Query: 224 -IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIM 282
I +G+PG++ ++ + + I++F+LDEAD ++ Q+ I LP+ Q++
Sbjct: 182 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240
Query: 283 LFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFEAV 335
SATY + + + +P ++L + SL +KQ+Y + K +EK + +
Sbjct: 241 AVSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHL 300
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
++ + QA++F + A LA+ +S +G +SG + QRL + + ++
Sbjct: 301 QELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQ 357
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 322 (118.4 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 84/299 (28%), Positives = 152/299 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F +L L P +L G+ GF+ PS +Q A+P L ++I Q++SGTGKT F+ L
Sbjct: 7 FGSLLLSPPVLAGLEAAGFHRPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 64
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNK-KITE- 222
+ QVL LAPT E+A+QI V+ +G + L + G L ++K ++ +
Sbjct: 65 DALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKKC 124
Query: 223 QIIIGTP--GKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQ 280
I +G+P G++ ++ + + + I++F+LDEAD ++ Q+ I LP++ Q
Sbjct: 125 HIAVGSPDVGRIKQL-IELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQ 183
Query: 281 IMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFE 333
++ SATY + + + P ++L + SL +KQ+Y + K +EK +
Sbjct: 184 MLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQ 243
Query: 334 AVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
+ ++ + QA++F + A LAE ++ G +SG + QRL + + ++
Sbjct: 244 HLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQ 302
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 314 (115.6 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 91/307 (29%), Positives = 155/307 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL--- 161
F L+L P++LK + E G+ P+ IQ A+P L +++ +Q+GTGKTA+FTL
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEG--RDVLGIAQTGTGKTASFTLPMI 61
Query: 162 TMLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKIT 221
T+L+R + P+ L L PT ELA Q+ E KH+ L+ + G + + +
Sbjct: 62 TLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLK-LTKALLIGGVSFKEQDALI 120
Query: 222 EQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSD 278
++ ++I TPG++LD + + L+ +++ V+DEAD M+ D RI P
Sbjct: 121 DRGVDVLIATPGRLLDHFERGKLL-LTGVQIMVVDEADRMLDMGFIPDIE-RIFSLTPFT 178
Query: 279 CQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSN- 337
Q + FSAT E+ + P I++ R+ + + I+Q V+ K EA
Sbjct: 179 RQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKR 238
Query: 338 --IYGVVTI-GQ----AMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
+ ++ G+ A+IFC+ + +A+ + K G + + G+L QR LD F
Sbjct: 239 AVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGF 298
Query: 391 REGEFKI 397
REG+ ++
Sbjct: 299 REGKLRL 305
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 312 (114.9 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 88/291 (30%), Positives = 148/291 (50%)
Query: 103 KTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLT 162
K F +L LK +L+ + +G+ + IQ +LP +LA ++IA++++G+GKTAAF +
Sbjct: 4 KAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGK--DVIARAKTGSGKTAAFGIG 61
Query: 163 MLSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITE 222
+LSR++ Q L L PT ELA Q+G+ + ++ + ++ + G E
Sbjct: 62 LLSRLDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLE 121
Query: 223 Q---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDC 279
++IGTPG++LD L+ DLS ++ VLDEAD M+ G QD + P
Sbjct: 122 HGAHVVIGTPGRLLDH-LRRGSLDLSALRTLVLDEADRML-DMGFQDDISALIAAAPPKR 179
Query: 280 QIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIY 339
Q +LFSATY + + + P+ + + E I+Q + + ++ EAV I
Sbjct: 180 QTLLFSATYPDSIAAMSAGVQREPVEVSVD-EVHGEGAIEQVFYEVDS-GQRIEAVERIL 237
Query: 340 GVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
G A+IFC+T+ +A ++ G + G+L +R +L RF
Sbjct: 238 GHYRPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRF 288
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 73/219 (33%), Positives = 124/219 (56%)
Query: 183 YELAIQIGEVVAKMGKHITDLSVRYAVRGENL--ERNKKITE--QIIIGTPGKVLDWGLK 238
Y A +I +V+ +G ++ + + G N+ E K E I++GTPG+V D L
Sbjct: 16 YNYAFKIQKVILALGDYM-GATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM-LN 73
Query: 239 YRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQD 298
R+ IK+FVLDEAD M++ +G +D I ++L + Q++L SAT +V+E +
Sbjct: 74 RRYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKK 132
Query: 299 MVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVSNIYGVVTIGQAMIFCHTRKTAA 358
+ +P+ I +K+EE +L+ IKQ Y+ + + K + + ++Y +TI QA+IF +TR+
Sbjct: 133 FMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVD 192
Query: 359 WLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
WL EKM V L G++ ++R I+ FR G ++
Sbjct: 193 WLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRV 231
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 321 (118.1 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 84/298 (28%), Positives = 155/298 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAF-TLTM 163
FE+L L +L+G+ +GF PS +Q A+P L ++I Q++SGTGKT F T+ +
Sbjct: 64 FESLLLSRPVLEGLRAVGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 164 LSRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKITEQ 223
S V ++ Q+L LAPT E+A+QI V+ +G + L + G L ++K ++
Sbjct: 122 DSLVLENLST-QILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK 180
Query: 224 --IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQI 281
I +G+PG++ ++ + + I++F+LDEAD ++ Q+ I LP+ Q+
Sbjct: 181 CHIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQM 239
Query: 282 MLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMC-------KNIDEKFEA 334
+ SATY + + + P ++L + SL +KQ+Y + K +EK +
Sbjct: 240 LAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQH 299
Query: 335 VSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFRE 392
+ ++ + QA++F + A LA+ +S +G +SG + +RL + + ++
Sbjct: 300 LQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQ 357
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 311 (114.5 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 86/302 (28%), Positives = 158/302 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F+ L L LL + E G+ +++Q+ +P L +++A +Q+GTGKTAAF L +L
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGK--DIMACAQTGTGKTAAFALPVL 60
Query: 165 SRV--NPSIQEP--QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
++ P+ +P + L + PT ELAIQ+ + K + + L G N+ +K
Sbjct: 61 EQLAAKPA-DKPLLRALVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKG 118
Query: 221 TEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
EQ I++ TPG++ D ++ DLS + V+DEAD M+ +D ++++ +
Sbjct: 119 VEQGVDILVATPGRLFDIIGQFNL-DLSSVTTLVIDEADRMLDLGFVRDIE-KVKRLIAP 176
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE--KFEAV 335
Q MLFSATY V + + M+ P + + E + ++Q + +D+ K E +
Sbjct: 177 VHQTMLFSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQ---LVYRVDKRRKAELL 232
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
S + G Q ++F T++ A L ++++ +G++ G+ G+ T R +LD F+ G+
Sbjct: 233 SELVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKL 292
Query: 396 KI 397
++
Sbjct: 293 RV 294
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 311 (114.5 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 86/302 (28%), Positives = 158/302 (52%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F+ L L LL + E G+ +++Q+ +P L +++A +Q+GTGKTAAF L +L
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGK--DIMACAQTGTGKTAAFALPVL 60
Query: 165 SRV--NPSIQEP--QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKKI 220
++ P+ +P + L + PT ELAIQ+ + K + + L G N+ +K
Sbjct: 61 EQLAAKPA-DKPLLRALVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKG 118
Query: 221 TEQ---IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPS 277
EQ I++ TPG++ D ++ DLS + V+DEAD M+ +D ++++ +
Sbjct: 119 VEQGVDILVATPGRLFDIIGQFNL-DLSSVTTLVIDEADRMLDLGFVRDIE-KVKRLIAP 176
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE--KFEAV 335
Q MLFSATY V + + M+ P + + E + ++Q + +D+ K E +
Sbjct: 177 VHQTMLFSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQ---LVYRVDKRRKAELL 232
Query: 336 SNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEF 395
S + G Q ++F T++ A L ++++ +G++ G+ G+ T R +LD F+ G+
Sbjct: 233 SELVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKL 292
Query: 396 KI 397
++
Sbjct: 293 RV 294
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 311 (114.5 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 96/315 (30%), Positives = 162/315 (51%)
Query: 102 VKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTL 161
VKTF L ++ EL+K +G+ PSKIQ ALP L ++I +Q+G+GKT AF +
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGK--DVIGLAQTGSGKTGAFAI 65
Query: 162 TMLSRVNPSI--QEPQ---------VLC-LAPTYELAIQIGEVVAKMGKHITDLSVRYAV 209
+L + + EP+ C L+PT ELAIQI E +G D+S+R AV
Sbjct: 66 PILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALG---ADISLRCAV 122
Query: 210 RGENLERNKKITE-----QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGH 264
++R ++ +I+ TPG++ D + F L +K VLDEAD ++
Sbjct: 123 LVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFE 182
Query: 265 QDFSIRIQKRLPSDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVM 324
+ + +I + +P + + LFSAT K+V + + + NP+ I+ + ++D +KQ Y
Sbjct: 183 KSLN-QILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQY-- 239
Query: 325 CKNIDEKFEAVSNIYGVVTIGQA--MIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQ 382
+ + K++ +Y + + ++ MIF T +LA + G +SG++T +
Sbjct: 240 -RFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSK 298
Query: 383 RLSILDRFREGEFKI 397
RL L++F+ GE I
Sbjct: 299 RLGALNKFKAGECNI 313
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 96/307 (31%), Positives = 152/307 (49%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
S F+ L L LLK + F ++IQ+ A+P +A +++A S++G+GKT AF
Sbjct: 3 STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAG--RDLLASSKTGSGKTLAFV 60
Query: 161 LTMLSRVNP----SIQEPQVLCLAPTYELAIQI-GEVVAKMGKHITDLSVRYAVRGENL- 214
L ML + S ++P+ L L PT ELA Q+ GE+ + +G + GEN
Sbjct: 61 LPMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGG--LSYTATLITGGENFN 118
Query: 215 ERNKKITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQ 272
++ K + + I+ TPG++ D L +R L ++ VLDEAD M+ ++ RI
Sbjct: 119 DQVKALARGPRFIVATPGRLADH-LDHRSLFLEGLETLVLDEADRMLDLGFAKELR-RIH 176
Query: 273 KRLPSDC-QIMLFSATYDK-EVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE 330
Q ++FSAT D +V + A +++ P I + E +I QH+ +C ++D
Sbjct: 177 NAAKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDH 236
Query: 331 KFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
K + I Q +IF TR L EK+++ L LSG L QR +I+ +F
Sbjct: 237 KEALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQF 296
Query: 391 REGEFKI 397
FKI
Sbjct: 297 ERAVFKI 303
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 96/307 (31%), Positives = 152/307 (49%)
Query: 101 SVKTFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFT 160
S F+ L L LLK + F ++IQ+ A+P +A +++A S++G+GKT AF
Sbjct: 3 STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAG--RDLLASSKTGSGKTLAFV 60
Query: 161 LTMLSRVNP----SIQEPQVLCLAPTYELAIQI-GEVVAKMGKHITDLSVRYAVRGENL- 214
L ML + S ++P+ L L PT ELA Q+ GE+ + +G + GEN
Sbjct: 61 LPMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGG--LSYTATLITGGENFN 118
Query: 215 ERNKKITE--QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQ 272
++ K + + I+ TPG++ D L +R L ++ VLDEAD M+ ++ RI
Sbjct: 119 DQVKALARGPRFIVATPGRLADH-LDHRSLFLEGLETLVLDEADRMLDLGFAKELR-RIH 176
Query: 273 KRLPSDC-QIMLFSATYDK-EVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDE 330
Q ++FSAT D +V + A +++ P I + E +I QH+ +C ++D
Sbjct: 177 NAAKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDH 236
Query: 331 KFEAVSNIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRF 390
K + I Q +IF TR L EK+++ L LSG L QR +I+ +F
Sbjct: 237 KEALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQF 296
Query: 391 REGEFKI 397
FKI
Sbjct: 297 ERAVFKI 303
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 318 (117.0 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 108/356 (30%), Positives = 176/356 (49%)
Query: 56 GNKDEEDKP-LSVAEKSLLQKIVRRGLIESKQELEIQRKD---PHSPLYSVK-TFEALHL 110
G +DE+ + S A++++L K + E K++ + Q + Y +F+ ++L
Sbjct: 156 GPEDEDSETDYSSADENILTKADTLKVKERKKKKKGQETGGFFEDASQYDENLSFQDMNL 215
Query: 111 KPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTMLSRV--N 168
LLK + MGF P+ IQ+ +P L ++ A + +GTGKTAAF L +L R+
Sbjct: 216 SRPLLKAITAMGFKQPTPIQKACIPVGLLGK--DICACAATGTGKTAAFALPVLERLIYK 273
Query: 169 PSIQEP--QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNK---KITEQ 223
P Q P +VL L PT EL IQ+ V ++ + +++ AV G +++ + +
Sbjct: 274 PR-QSPVTRVLVLVPTRELGIQVHSVTKQLAQ-FCNITTCLAVGGLDVKSQEAALRAAPD 331
Query: 224 IIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLPSDCQIML 283
I+I TPG+++D F LS I+V +LDEAD M+ + I + Q ML
Sbjct: 332 ILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMK-EIIRMCSHHRQTML 390
Query: 284 FSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCK-NIDEKFEA-VSNIYGV 341
FSAT EV + A + NP+ I + + ++Q +V + N + EA V+ +
Sbjct: 391 FSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAIVAALLTR 450
Query: 342 VTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFKI 397
M+F T+K A + + GL VG L G L+ QRL L RF++ + I
Sbjct: 451 TFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDI 506
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 83/301 (27%), Positives = 151/301 (50%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F LKPELL+ + + GF PS++Q+ +P + +++ Q++SG GKTA F L+ L
Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGT--DVLCQAKSGMGKTAVFVLSTL 110
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLE------RNK 218
++ P E VL L T ELA QI A+ K++ D+ G N++ ++K
Sbjct: 111 QQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDK 170
Query: 219 KITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMI-ATQGHQDFSIRIQKRLPS 277
+ I++ TPG+ L+ ++ + ++ +K FVLDE D ++ + +D + + P
Sbjct: 171 SKSPHIVVATPGR-LNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQ-EVFRATPP 228
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVMCKNIDEKFEAVS 336
Q+M+FSAT E+ + + NPL I + E + +L ++QHYV + K ++
Sbjct: 229 QKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLEE-KAKNRKIN 287
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++ + Q +IF + A L + + + G L E+R+ F++ + +
Sbjct: 288 DLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKR 347
Query: 397 I 397
I
Sbjct: 348 I 348
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 305 (112.4 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 88/301 (29%), Positives = 152/301 (50%)
Query: 104 TFEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTM 163
TF L L P +LK V G+ P+ +Q A+P L + +++A +Q+GTGKTAAF L
Sbjct: 2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENV--DLLATAQTGTGKTAAFVLPA 59
Query: 164 LSRVNPSIQEP----QVLCLAPTYELAIQIGEVVAKMGKHITDLSVRYAVRGENLERNKK 219
L R++ Q P +VL L PT ELA Q+ + V G + S + G +
Sbjct: 60 LQRLSSPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAI-LGGMPYHAQLR 118
Query: 220 ITE---QIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEADVMIATQGHQDFSIRIQKRLP 276
+ I+ TPG+++D L R DLS++++ VLDEAD M+ G D RI P
Sbjct: 119 LLSAPVDFIVATPGRLVDL-LDRRSLDLSRLELLVLDEADRML-DMGFSDDVDRIAAASP 176
Query: 277 SDCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEESLDNIKQHYVMCKNIDEKFEAVS 336
+ Q +LF+AT D + A ++ P I + + + ++I+Q + ++ K +
Sbjct: 177 ATRQTLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHVADDLHHKNRLLR 236
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
++ ++ +A+IF T++ A LA ++ +G + L G++ R + ++G +
Sbjct: 237 HLITDESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIR 296
Query: 397 I 397
+
Sbjct: 297 L 297
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 84/301 (27%), Positives = 154/301 (51%)
Query: 105 FEALHLKPELLKGVYEMGFYAPSKIQETALPTLLADPPHNMIAQSQSGTGKTAAFTLTML 164
F+ LKPEL + + + GF PS++Q+ +P + +++ Q++SG GKTA F L+ L
Sbjct: 64 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGT--DVLCQAKSGLGKTAVFVLSTL 121
Query: 165 SRVNPSIQEPQVLCLAPTYELAIQIGEVVAKMGKHITDL--SVRYA----VRGENLERNK 218
+++P E V+ + ELA QI + K++ D+ +V Y + L +NK
Sbjct: 122 QQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNK 181
Query: 219 KITEQIIIGTPGKVLDWGLKYRFFDLSKIKVFVLDEAD-VMIATQGHQDFSIRIQKRLPS 277
I++ TPG+ L ++ ++ DLS +K FV+DE D V+ +D I + P
Sbjct: 182 DTAPHIVVATPGR-LKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQ-EIFRATPR 239
Query: 278 DCQIMLFSATYDKEVMEFAQDMVPNPLIIKLKREEE-SLDNIKQHYVMCKNIDEKFEAVS 336
D Q+M+FSAT +E+ + + NPL I + E + +L ++Q+Y+ + EK ++
Sbjct: 240 DKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEE-REKNRKLA 298
Query: 337 NIYGVVTIGQAMIFCHTRKTAAWLAEKMSKEGLNVGLLSGELTVEQRLSILDRFREGEFK 396
+ + Q +IF + A L + ++ + G + E+R++ F++ E +
Sbjct: 299 QLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKR 358
Query: 397 I 397
I
Sbjct: 359 I 359
WARNING: HSPs involving 588 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 399 385 0.00092 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 838
No. of states in DFA: 613 (65 KB)
Total size of DFA: 227 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.43u 0.07s 33.50t Elapsed: 00:00:11
Total cpu time: 33.50u 0.07s 33.57t Elapsed: 00:00:11
Start: Thu Aug 15 12:25:17 2013 End: Thu Aug 15 12:25:28 2013
WARNINGS ISSUED: 2