Query psy11868
Match_columns 374
No_of_seqs 288 out of 1439
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 20:59:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a2n_A Peptidylprolyl isomeras 100.0 1.3E-52 4.6E-57 380.4 18.6 174 201-374 2-176 (176)
2 2fu0_A Cyclophilin, putative; 100.0 1.1E-50 3.7E-55 362.7 17.8 154 220-374 5-159 (160)
3 2x7k_A Peptidyl-prolyl CIS-tra 100.0 6E-50 2.1E-54 359.8 17.6 153 221-374 12-165 (166)
4 2ok3_A Peptidyl-prolyl CIS-tra 100.0 9.1E-50 3.1E-54 356.8 17.8 152 222-373 2-154 (161)
5 2wfi_A Peptidyl-prolyl CIS-tra 100.0 4.1E-49 1.4E-53 358.3 18.8 158 214-373 8-178 (179)
6 1a58_A Cyclophilin; isomerase, 100.0 6.8E-49 2.3E-53 356.2 19.0 158 214-373 5-175 (177)
7 2b71_A Cyclophilin-like protei 100.0 4.9E-49 1.7E-53 362.6 18.3 152 221-373 39-191 (196)
8 1zkc_A Peptidyl-prolyl CIS-tra 100.0 8.8E-49 3E-53 361.1 19.3 152 221-373 20-173 (197)
9 2poe_A Cyclophilin-like protei 100.0 6.5E-49 2.2E-53 358.8 18.1 152 221-373 17-173 (185)
10 2he9_A NK-tumor recognition pr 100.0 9E-49 3.1E-53 359.8 18.8 158 214-373 18-188 (192)
11 1mzw_A Cyclophilin H, U-snRNP- 100.0 1E-48 3.4E-53 355.2 17.0 158 214-373 9-176 (177)
12 2haq_A Cyclophilin; rotamase, 100.0 1.4E-48 4.9E-53 352.9 16.8 156 215-373 11-171 (172)
13 3pmp_A Cyclophilin A; peptidyl 100.0 3.2E-48 1.1E-52 347.6 18.9 156 215-373 2-162 (164)
14 2z6w_A Peptidyl-prolyl CIS-tra 100.0 3.1E-48 1.1E-52 348.3 18.6 156 215-373 3-163 (165)
15 2r99_A Peptidyl-prolyl CIS-tra 100.0 3.8E-48 1.3E-52 350.2 19.1 158 213-373 9-171 (173)
16 2cmt_A Peptidyl-prolyl CIS-tra 100.0 3.4E-48 1.1E-52 350.3 18.6 157 214-373 9-170 (172)
17 3bo7_A Peptidyl-prolyl CIS-tra 100.0 2.8E-48 9.6E-53 358.6 18.0 152 221-373 7-171 (201)
18 2igv_A Peptidyl-prolyl CIS-tra 100.0 2.9E-48 9.8E-53 350.9 17.6 156 215-373 3-170 (173)
19 3ich_A Peptidyl-prolyl CIS-tra 100.0 3.1E-48 1.1E-52 355.1 17.1 157 215-373 15-176 (188)
20 1qng_A Peptidyl-prolyl CIS-tra 100.0 4.1E-48 1.4E-52 349.0 17.2 156 215-373 3-169 (170)
21 2k7n_A Peptidyl-prolyl CIS-tra 100.0 3.4E-48 1.2E-52 358.7 16.1 153 221-374 12-165 (203)
22 1w74_A Peptidyl-prolyl CIS-tra 100.0 2.2E-47 7.5E-52 350.4 18.4 150 221-374 24-191 (191)
23 1z81_A Cyclophilin; structural 100.0 1E-47 3.6E-52 361.2 16.5 179 193-373 26-228 (229)
24 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.4E-47 8.1E-52 348.8 17.2 157 213-372 17-185 (186)
25 4fru_A Cyclophilin B, peptidyl 100.0 5.2E-47 1.8E-51 345.9 17.1 158 214-373 11-173 (185)
26 2hq6_A Serologically defined c 100.0 1.9E-46 6.6E-51 342.5 16.9 151 221-373 25-178 (185)
27 3k2c_A Peptidyl-prolyl CIS-tra 100.0 4.4E-46 1.5E-50 342.1 18.9 158 213-373 25-189 (193)
28 3rdd_A Peptidyl-prolyl CIS-tra 100.0 3.1E-46 1E-50 340.8 17.7 157 214-373 21-182 (184)
29 2c3b_A Ppiase, cyclophilin; is 100.0 6.4E-47 2.2E-51 341.9 11.5 156 217-373 4-171 (172)
30 3bkp_A Cyclophilin; malaria, i 100.0 8.9E-46 3.1E-50 348.8 16.0 151 221-373 22-191 (232)
31 2ose_A Probable peptidyl-proly 100.0 9.3E-46 3.2E-50 349.0 15.6 156 214-373 13-205 (234)
32 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.2E-45 4E-50 331.5 15.1 149 222-373 5-166 (167)
33 1lop_A Cyclophilin A; rotamase 100.0 7.2E-46 2.5E-50 332.3 13.3 149 223-374 2-163 (164)
34 1ihg_A Cyclophilin 40; ppiase 100.0 5.1E-45 1.7E-49 358.9 17.2 156 215-373 15-183 (370)
35 1v9t_A Cyclophilin B; beta bar 100.0 4.8E-45 1.6E-49 327.6 15.4 151 221-374 5-165 (166)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.2E-37 4.1E-42 309.9 9.8 131 222-353 172-345 (369)
37 4ery_A WD repeat-containing pr 96.5 0.039 1.3E-06 50.0 12.9 74 15-122 157-231 (312)
38 3vl1_A 26S proteasome regulato 96.1 0.065 2.2E-06 50.2 13.0 128 15-184 147-278 (420)
39 3frx_A Guanine nucleotide-bind 96.0 0.026 8.9E-07 52.2 9.5 72 15-122 204-275 (319)
40 3gre_A Serine/threonine-protei 96.0 0.089 3.1E-06 49.8 13.1 71 18-121 181-252 (437)
41 3zwl_B Eukaryotic translation 95.8 0.049 1.7E-06 49.2 10.1 82 8-124 32-115 (369)
42 3iz6_a 40S ribosomal protein R 95.7 0.046 1.6E-06 51.8 10.0 81 15-123 257-338 (380)
43 3vl1_A 26S proteasome regulato 95.7 0.082 2.8E-06 49.4 11.5 96 15-121 189-285 (420)
44 4ery_A WD repeat-containing pr 95.7 0.16 5.5E-06 45.8 13.1 72 15-121 115-187 (312)
45 3ow8_A WD repeat-containing pr 95.5 0.057 2E-06 50.2 9.7 72 15-121 172-244 (321)
46 2pbi_B Guanine nucleotide-bind 95.4 0.18 6.2E-06 47.3 12.8 104 19-183 210-314 (354)
47 1erj_A Transcriptional repress 95.3 0.2 6.8E-06 47.5 12.9 106 15-183 131-237 (393)
48 4gqb_B Methylosome protein 50; 95.2 0.19 6.6E-06 47.5 12.2 73 15-122 135-209 (344)
49 2ynn_A Coatomer subunit beta'; 95.1 0.088 3E-06 48.1 9.5 86 3-123 8-95 (304)
50 3ow8_A WD repeat-containing pr 95.1 0.092 3.2E-06 48.7 9.6 72 15-121 214-286 (321)
51 3frx_A Guanine nucleotide-bind 95.0 0.31 1.1E-05 44.8 12.9 111 15-183 73-184 (319)
52 4ggc_A P55CDC, cell division c 95.0 0.056 1.9E-06 48.1 7.4 66 27-123 41-107 (318)
53 1got_B GT-beta; complex (GTP-b 95.0 0.37 1.3E-05 44.6 13.3 108 15-183 192-300 (340)
54 1got_B GT-beta; complex (GTP-b 94.8 0.12 4.3E-06 47.8 9.6 74 15-121 234-308 (340)
55 3k26_A Polycomb protein EED; W 94.8 0.34 1.2E-05 43.6 12.3 67 21-122 87-155 (366)
56 3dm0_A Maltose-binding peripla 94.8 0.077 2.6E-06 54.5 8.7 73 15-123 569-641 (694)
57 2aq5_A Coronin-1A; WD40 repeat 94.8 0.56 1.9E-05 44.1 14.1 74 15-121 139-214 (402)
58 1vyh_C Platelet-activating fac 94.7 0.058 2E-06 51.8 7.3 72 15-121 158-230 (410)
59 1gxr_A ESG1, transducin-like e 94.6 0.16 5.4E-06 45.3 9.5 70 15-120 191-261 (337)
60 1gxr_A ESG1, transducin-like e 94.4 0.45 1.5E-05 42.3 12.0 72 15-121 149-221 (337)
61 3zwl_B Eukaryotic translation 94.3 0.13 4.6E-06 46.3 8.4 71 15-121 226-311 (369)
62 1k8k_C P40, ARP2/3 complex 41 94.3 0.25 8.4E-06 44.9 10.1 84 2-120 2-89 (372)
63 1l0q_A Surface layer protein; 94.3 0.19 6.4E-06 46.6 9.4 89 2-125 15-116 (391)
64 4h5i_A Guanine nucleotide-exch 94.2 0.13 4.6E-06 48.7 8.4 71 15-119 141-211 (365)
65 4aow_A Guanine nucleotide-bind 94.1 0.68 2.3E-05 41.4 12.6 72 15-122 223-294 (340)
66 1erj_A Transcriptional repress 94.1 0.18 6.3E-06 47.8 9.2 72 15-122 173-246 (393)
67 2pbi_B Guanine nucleotide-bind 94.1 0.26 8.7E-06 46.3 10.1 74 15-121 248-322 (354)
68 4gqb_B Methylosome protein 50; 94.0 0.14 4.8E-06 48.5 8.2 88 1-121 151-253 (344)
69 3mmy_A MRNA export factor; mRN 93.9 0.21 7.1E-06 45.0 8.8 72 15-122 94-168 (368)
70 2aq5_A Coronin-1A; WD40 repeat 93.9 0.66 2.2E-05 43.6 12.5 69 15-116 184-256 (402)
71 3lrv_A PRE-mRNA-splicing facto 93.8 0.15 5.1E-06 47.1 7.8 70 15-118 133-205 (343)
72 3dw8_B Serine/threonine-protei 93.7 0.6 2E-05 43.8 11.9 93 15-128 293-387 (447)
73 1vyh_C Platelet-activating fac 93.7 0.17 5.9E-06 48.5 8.2 64 26-122 313-377 (410)
74 1r5m_A SIR4-interacting protei 93.6 0.48 1.6E-05 43.5 10.8 58 26-116 305-363 (425)
75 2w18_A PALB2, fancn, partner a 93.5 0.25 8.6E-06 48.9 9.2 67 25-121 197-276 (356)
76 3vu4_A KMHSV2; beta-propeller 93.5 0.32 1.1E-05 45.7 9.5 68 15-115 203-272 (355)
77 4aez_A CDC20, WD repeat-contai 93.2 0.18 6.2E-06 47.7 7.4 74 15-122 99-173 (401)
78 3bws_A Protein LP49; two-domai 93.1 0.48 1.7E-05 44.4 10.2 72 15-121 310-397 (433)
79 3dw8_B Serine/threonine-protei 93.1 0.37 1.3E-05 45.2 9.3 85 14-121 233-323 (447)
80 3gre_A Serine/threonine-protei 93.1 0.16 5.4E-06 48.1 6.8 76 15-124 222-302 (437)
81 4gga_A P55CDC, cell division c 93.0 0.21 7.1E-06 47.7 7.4 66 27-123 121-187 (420)
82 3v7d_B Cell division control p 92.9 0.4 1.4E-05 45.7 9.4 71 16-121 277-348 (464)
83 3k26_A Polycomb protein EED; W 92.9 0.32 1.1E-05 43.8 8.3 74 15-120 123-198 (366)
84 3lrv_A PRE-mRNA-splicing facto 92.8 0.16 5.4E-06 47.0 6.2 71 15-119 178-249 (343)
85 2ynn_A Coatomer subunit beta'; 92.8 0.31 1.1E-05 44.3 8.1 65 25-122 202-267 (304)
86 1sq9_A Antiviral protein SKI8; 92.8 0.29 1E-05 45.1 8.0 86 15-122 241-330 (397)
87 1pby_B Quinohemoprotein amine 92.7 0.45 1.5E-05 42.4 8.9 58 30-121 259-317 (337)
88 2w18_A PALB2, fancn, partner a 92.7 0.41 1.4E-05 47.4 9.3 24 25-48 299-322 (356)
89 4a11_B DNA excision repair pro 92.6 0.67 2.3E-05 42.4 10.1 94 8-123 43-140 (408)
90 4e54_B DNA damage-binding prot 92.4 1.2 4.2E-05 42.6 12.2 78 10-120 166-246 (435)
91 1sq9_A Antiviral protein SKI8; 92.1 0.51 1.7E-05 43.5 8.7 78 15-122 194-275 (397)
92 1nr0_A Actin interacting prote 92.0 0.46 1.6E-05 48.1 9.0 79 15-122 198-278 (611)
93 2vdu_B TRNA (guanine-N(7)-)-me 92.0 0.37 1.3E-05 46.3 7.9 73 15-122 203-279 (450)
94 2ovr_B FBW7, F-BOX/WD repeat p 92.0 0.55 1.9E-05 44.7 9.1 31 89-121 367-398 (445)
95 4h5i_A Guanine nucleotide-exch 92.0 0.62 2.1E-05 44.0 9.3 56 15-104 277-332 (365)
96 3u4y_A Uncharacterized protein 92.0 0.38 1.3E-05 43.4 7.5 78 13-125 3-83 (331)
97 3mmy_A MRNA export factor; mRN 91.8 0.58 2E-05 42.0 8.5 85 9-128 40-131 (368)
98 2ymu_A WD-40 repeat protein; u 91.7 0.58 2E-05 45.7 9.0 37 9-48 17-54 (577)
99 3odt_A Protein DOA1; ubiquitin 91.6 0.46 1.6E-05 41.8 7.5 70 15-120 233-302 (313)
100 3bws_A Protein LP49; two-domai 91.5 0.63 2.2E-05 43.6 8.8 72 16-122 178-251 (433)
101 4ggc_A P55CDC, cell division c 91.5 0.19 6.5E-06 44.6 4.9 46 1-48 47-106 (318)
102 3iz6_a 40S ribosomal protein R 91.5 0.57 2E-05 44.1 8.5 70 19-123 218-289 (380)
103 3u4y_A Uncharacterized protein 91.5 0.93 3.2E-05 40.8 9.6 35 88-122 86-125 (331)
104 1k8k_C P40, ARP2/3 complex 41 91.4 0.58 2E-05 42.4 8.1 88 15-121 150-240 (372)
105 3mkq_A Coatomer beta'-subunit; 91.1 0.74 2.5E-05 47.1 9.5 86 3-123 8-95 (814)
106 1l0q_A Surface layer protein; 91.1 1.1 3.6E-05 41.4 9.7 74 15-123 123-198 (391)
107 2ovr_B FBW7, F-BOX/WD repeat p 91.0 0.87 3E-05 43.4 9.3 38 9-48 119-156 (445)
108 4g56_B MGC81050 protein; prote 90.9 0.91 3.1E-05 42.6 9.2 96 26-182 244-341 (357)
109 3dwl_C Actin-related protein 2 90.9 0.3 1E-05 45.0 5.7 79 3-116 6-88 (377)
110 3mkq_A Coatomer beta'-subunit; 90.8 2.4 8E-05 43.4 12.8 73 15-122 63-137 (814)
111 3v7d_B Cell division control p 90.8 0.78 2.7E-05 43.6 8.7 96 13-120 316-427 (464)
112 3i2n_A WD repeat-containing pr 90.5 0.8 2.7E-05 41.1 8.1 75 16-121 126-206 (357)
113 3jrp_A Fusion protein of prote 90.2 4.4 0.00015 36.4 12.9 63 19-116 69-136 (379)
114 2xzm_R RACK1; ribosome, transl 90.1 1.2 4E-05 41.1 9.1 69 15-119 221-290 (343)
115 1r5m_A SIR4-interacting protei 90.1 1 3.5E-05 41.3 8.5 73 15-123 116-189 (425)
116 3f3f_A Nucleoporin SEH1; struc 90.1 0.87 3E-05 40.0 7.8 105 15-122 222-345 (351)
117 4aez_A CDC20, WD repeat-contai 90.0 1.1 3.7E-05 42.2 8.9 75 15-120 311-386 (401)
118 1pgu_A Actin interacting prote 90.0 2.2 7.4E-05 41.6 11.3 74 16-121 169-245 (615)
119 3jrp_A Fusion protein of prote 90.0 2.1 7.1E-05 38.6 10.4 76 6-116 9-90 (379)
120 1pby_B Quinohemoprotein amine 89.6 1.5 5.3E-05 38.8 9.2 79 15-122 41-132 (337)
121 1yfq_A Cell cycle arrest prote 89.4 0.69 2.4E-05 41.5 6.7 77 10-122 13-97 (342)
122 4aow_A Guanine nucleotide-bind 89.2 1.5 5.1E-05 39.1 8.8 65 25-122 189-254 (340)
123 3ei3_B DNA damage-binding prot 89.2 3.5 0.00012 37.9 11.6 105 15-184 171-282 (383)
124 1jmx_B Amine dehydrogenase; ox 89.0 1.3 4.6E-05 39.6 8.4 71 18-122 10-82 (349)
125 2vdu_B TRNA (guanine-N(7)-)-me 88.9 0.81 2.8E-05 43.9 7.2 71 15-117 110-183 (450)
126 1jmx_B Amine dehydrogenase; ox 88.7 1.2 4.2E-05 39.8 7.9 58 30-121 274-332 (349)
127 4gga_A P55CDC, cell division c 88.6 0.47 1.6E-05 45.2 5.2 46 1-48 127-186 (420)
128 3sfz_A APAF-1, apoptotic pepti 88.5 0.98 3.4E-05 49.1 8.3 75 14-123 622-697 (1249)
129 3i2n_A WD repeat-containing pr 88.5 1.6 5.5E-05 39.1 8.5 69 15-119 176-248 (357)
130 4gq1_A NUP37; propeller, trans 88.2 0.8 2.7E-05 43.5 6.6 67 13-112 321-387 (393)
131 3dm0_A Maltose-binding peripla 88.1 1.1 3.8E-05 45.8 8.0 64 25-121 535-599 (694)
132 3dwl_C Actin-related protein 2 88.0 0.83 2.8E-05 41.9 6.4 68 15-116 108-179 (377)
133 2ojh_A Uncharacterized protein 88.0 1.8 6.2E-05 37.1 8.2 30 88-117 88-122 (297)
134 1pgu_A Actin interacting prote 87.8 1.2 4.1E-05 43.4 7.7 78 15-124 214-293 (615)
135 1nir_A Nitrite reductase; hemo 87.3 2.1 7.2E-05 43.4 9.4 71 15-121 186-264 (543)
136 3vgz_A Uncharacterized protein 87.1 2 7E-05 38.5 8.3 76 14-122 147-223 (353)
137 1yfq_A Cell cycle arrest prote 87.1 1.1 3.6E-05 40.3 6.3 82 14-121 200-289 (342)
138 3ei3_B DNA damage-binding prot 86.9 1.9 6.6E-05 39.7 8.3 71 15-121 212-289 (383)
139 3f3f_A Nucleoporin SEH1; struc 86.9 2.7 9.2E-05 36.8 8.8 73 9-116 12-92 (351)
140 3odt_A Protein DOA1; ubiquitin 86.8 2.4 8.2E-05 37.1 8.4 62 26-121 200-262 (313)
141 3vgz_A Uncharacterized protein 86.7 2.6 9E-05 37.8 8.9 72 14-121 237-310 (353)
142 3dsm_A Uncharacterized protein 86.7 2.9 9.8E-05 38.8 9.3 59 29-122 150-220 (328)
143 3sfz_A APAF-1, apoptotic pepti 86.6 2.3 7.8E-05 46.2 9.8 89 1-122 681-782 (1249)
144 2j04_B YDR362CP, TAU91; beta p 86.4 0.83 2.8E-05 46.4 5.8 81 8-121 308-393 (524)
145 4e54_B DNA damage-binding prot 86.2 3.2 0.00011 39.6 9.7 31 15-47 304-334 (435)
146 1p22_A F-BOX/WD-repeat protein 85.9 2.1 7.3E-05 40.7 8.2 70 16-122 140-210 (435)
147 1p22_A F-BOX/WD-repeat protein 85.7 2.4 8.3E-05 40.2 8.5 29 18-48 265-293 (435)
148 2hes_X YDR267CP; beta-propelle 85.6 3.9 0.00013 37.5 9.5 72 15-121 115-193 (330)
149 3fm0_A Protein CIAO1; WDR39,SG 85.6 3.2 0.00011 38.3 9.0 69 15-115 24-93 (345)
150 2ymu_A WD-40 repeat protein; u 85.3 1.7 5.8E-05 42.4 7.3 69 15-120 475-544 (577)
151 4a11_B DNA excision repair pro 85.1 1.7 5.9E-05 39.6 6.8 61 26-119 309-370 (408)
152 2xzm_R RACK1; ribosome, transl 84.4 6 0.00021 36.2 10.3 69 18-121 38-114 (343)
153 2hqs_A Protein TOLB; TOLB, PAL 84.0 3.6 0.00012 39.6 8.8 72 15-122 186-264 (415)
154 3jro_A Fusion protein of prote 83.6 0.36 1.2E-05 50.6 1.7 88 14-103 261-363 (753)
155 4g56_B MGC81050 protein; prote 83.3 1.3 4.4E-05 41.5 5.2 38 9-47 270-308 (357)
156 1k32_A Tricorn protease; prote 82.8 3.2 0.00011 44.9 8.8 74 15-123 386-470 (1045)
157 2oiz_A Aromatic amine dehydrog 82.8 6.1 0.00021 37.3 9.8 34 87-120 110-146 (361)
158 2ojh_A Uncharacterized protein 82.8 2.9 9.8E-05 35.8 6.9 60 28-121 19-79 (297)
159 3vu4_A KMHSV2; beta-propeller 82.3 2.8 9.6E-05 39.1 7.1 34 88-121 199-234 (355)
160 1nir_A Nitrite reductase; hemo 82.2 3.2 0.00011 42.0 8.0 74 14-123 144-220 (543)
161 2pm9_A Protein WEB1, protein t 81.6 3.3 0.00011 38.1 7.3 68 15-117 270-340 (416)
162 2pm9_A Protein WEB1, protein t 81.5 2.7 9.3E-05 38.7 6.7 72 15-115 173-250 (416)
163 3fvz_A Peptidyl-glycine alpha- 80.6 19 0.00066 32.8 12.2 117 15-183 203-321 (329)
164 1ri6_A Putative isomerase YBHE 80.5 11 0.00037 33.3 10.1 35 87-121 86-125 (343)
165 4gq1_A NUP37; propeller, trans 79.6 8.2 0.00028 36.4 9.5 69 20-123 157-227 (393)
166 2oaj_A Protein SNI1; WD40 repe 79.4 3.6 0.00012 44.4 7.7 64 19-118 69-133 (902)
167 3scy_A Hypothetical bacterial 79.3 8.7 0.0003 35.1 9.3 34 87-120 308-345 (361)
168 3fm0_A Protein CIAO1; WDR39,SG 79.1 6.6 0.00023 36.2 8.5 71 15-117 113-184 (345)
169 2z3z_A Dipeptidyl aminopeptida 79.0 4.5 0.00015 40.9 7.8 35 87-121 183-251 (706)
170 2hes_X YDR267CP; beta-propelle 78.8 8.9 0.00031 35.0 9.2 66 15-113 20-88 (330)
171 1nr0_A Actin interacting prote 77.8 2 7E-05 43.3 4.9 101 15-122 247-363 (611)
172 2ecf_A Dipeptidyl peptidase IV 77.6 4 0.00014 41.5 7.0 96 14-125 43-152 (741)
173 2hqs_A Protein TOLB; TOLB, PAL 76.5 4.8 0.00016 38.7 6.9 43 88-130 357-403 (415)
174 2qe8_A Uncharacterized protein 76.4 6.6 0.00023 36.4 7.7 67 30-123 92-163 (343)
175 3no2_A Uncharacterized protein 75.8 8.8 0.0003 35.0 8.2 64 26-123 10-73 (276)
176 1pjx_A Dfpase, DIISOPROPYLFLUO 75.3 5.7 0.00019 35.2 6.6 28 87-114 270-299 (314)
177 2ecf_A Dipeptidyl peptidase IV 74.0 5.1 0.00017 40.7 6.6 36 87-122 154-189 (741)
178 3kop_A Uncharacterized protein 73.3 12 0.0004 33.8 8.0 20 232-251 35-55 (188)
179 3jro_A Fusion protein of prote 73.1 13 0.00044 38.7 9.6 74 8-116 9-88 (753)
180 2mad_H Methylamine dehydrogena 72.9 18 0.00061 34.6 9.9 56 31-120 298-356 (373)
181 3e5z_A Putative gluconolactona 72.7 13 0.00045 32.9 8.4 33 87-121 220-252 (296)
182 1ri6_A Putative isomerase YBHE 72.2 25 0.00085 30.9 10.0 31 88-118 132-165 (343)
183 2dg1_A DRP35, lactonase; beta 72.1 8 0.00027 34.8 6.9 73 14-121 51-128 (333)
184 3o4h_A Acylamino-acid-releasin 71.3 9.1 0.00031 37.9 7.6 74 15-125 117-195 (582)
185 3c75_H MADH, methylamine dehyd 71.0 14 0.00048 36.8 8.9 36 87-122 179-217 (426)
186 2oit_A Nucleoporin 214KDA; NH2 70.5 12 0.00041 36.4 8.2 64 15-113 157-222 (434)
187 3dsm_A Uncharacterized protein 69.9 10 0.00035 35.0 7.2 31 87-118 227-257 (328)
188 2oiz_A Aromatic amine dehydrog 69.3 23 0.00079 33.2 9.7 55 31-121 286-343 (361)
189 2mad_H Methylamine dehydrogena 68.5 25 0.00084 33.6 9.8 35 87-122 127-165 (373)
190 1mda_H Methylamine dehydrogena 67.8 9.6 0.00033 37.1 6.8 35 87-121 316-353 (368)
191 2pm7_B Protein transport prote 67.0 5.6 0.00019 35.7 4.6 32 14-47 16-49 (297)
192 1xfd_A DIP, dipeptidyl aminope 67.0 7.6 0.00026 39.2 6.1 35 88-122 117-151 (723)
193 3bg1_A Protein SEC13 homolog; 66.7 4.6 0.00016 36.8 4.0 31 10-42 15-46 (316)
194 1z68_A Fibroblast activation p 66.7 14 0.00048 37.4 8.0 61 27-117 32-102 (719)
195 1xfd_A DIP, dipeptidyl aminope 66.5 11 0.00037 38.1 7.0 73 15-120 24-106 (723)
196 3amr_A 3-phytase; beta-propell 66.1 99 0.0034 30.3 13.6 74 87-183 182-262 (355)
197 2z3z_A Dipeptidyl aminopeptida 65.2 13 0.00044 37.5 7.4 62 27-122 97-163 (706)
198 1jof_A Carboxy-CIS,CIS-muconat 65.2 38 0.0013 31.2 10.2 32 87-118 147-181 (365)
199 3no2_A Uncharacterized protein 64.5 14 0.00046 33.7 6.8 71 17-124 134-205 (276)
200 3sjl_D Methylamine dehydrogena 64.4 12 0.00043 36.8 6.9 60 30-123 310-372 (386)
201 4fhn_B Nucleoporin NUP120; pro 64.3 4.1 0.00014 45.3 3.7 28 21-49 250-277 (1139)
202 2oaj_A Protein SNI1; WD40 repe 64.2 27 0.00091 37.6 10.0 86 8-122 575-672 (902)
203 3f7f_A Nucleoporin NUP120; nuc 63.9 5.4 0.00018 43.0 4.4 29 20-49 231-259 (729)
204 3c75_H MADH, methylamine dehyd 63.4 12 0.00042 37.2 6.7 57 31-121 350-409 (426)
205 1z68_A Fibroblast activation p 60.5 7.8 0.00027 39.3 4.8 34 88-121 113-146 (719)
206 3sjl_D Methylamine dehydrogena 60.3 16 0.00055 36.0 6.9 36 86-121 138-176 (386)
207 3fvz_A Peptidyl-glycine alpha- 59.9 24 0.00083 32.2 7.7 85 14-124 149-237 (329)
208 3hfq_A Uncharacterized protein 58.9 63 0.0022 28.9 10.2 34 87-120 288-325 (347)
209 2nnz_A Hypothetical protein; b 58.8 19 0.00064 31.3 6.2 96 228-351 37-143 (153)
210 3hfq_A Uncharacterized protein 58.6 40 0.0014 30.2 8.8 26 88-113 190-217 (347)
211 4a5s_A Dipeptidyl peptidase 4 58.2 19 0.00064 37.2 7.2 71 30-128 35-115 (740)
212 4gq2_M Nucleoporin NUP120; bet 57.5 8.6 0.0003 42.1 4.7 28 21-49 248-275 (950)
213 2xyi_A Probable histone-bindin 55.9 17 0.00057 34.5 6.0 26 15-42 239-265 (430)
214 1q7f_A NHL, brain tumor CG1071 54.8 38 0.0013 29.5 7.8 33 88-121 210-244 (286)
215 3g4e_A Regucalcin; six bladed 54.4 33 0.0011 30.8 7.4 34 87-121 201-236 (297)
216 3hrp_A Uncharacterized protein 53.5 36 0.0012 32.8 8.0 71 15-122 138-211 (409)
217 3o4h_A Acylamino-acid-releasin 52.9 27 0.00091 34.5 7.1 34 88-122 198-234 (582)
218 3e5z_A Putative gluconolactona 50.5 60 0.0021 28.5 8.4 31 87-117 258-289 (296)
219 1qks_A Cytochrome CD1 nitrite 49.7 47 0.0016 34.0 8.5 35 88-122 243-283 (567)
220 2gop_A Trilobed protease; beta 48.5 60 0.0021 28.9 8.2 16 88-103 107-122 (347)
221 3scy_A Hypothetical bacterial 48.4 81 0.0028 28.4 9.2 69 14-112 217-289 (361)
222 3pe7_A Oligogalacturonate lyas 47.4 47 0.0016 30.1 7.4 35 89-123 85-120 (388)
223 1q7f_A NHL, brain tumor CG1071 45.9 75 0.0026 27.5 8.3 35 87-122 166-201 (286)
224 3pe7_A Oligogalacturonate lyas 45.1 49 0.0017 29.9 7.1 31 16-48 89-119 (388)
225 3dr2_A Exported gluconolactona 44.8 47 0.0016 29.8 6.9 33 88-120 134-184 (305)
226 3g4e_A Regucalcin; six bladed 44.3 79 0.0027 28.2 8.3 33 88-121 57-89 (297)
227 2pm7_B Protein transport prote 44.2 22 0.00074 31.8 4.4 22 19-42 67-88 (297)
228 1qks_A Cytochrome CD1 nitrite 44.0 60 0.002 33.2 8.2 67 22-122 168-237 (567)
229 3c5m_A Oligogalacturonate lyas 43.7 42 0.0014 30.3 6.3 33 90-122 86-119 (396)
230 2xdw_A Prolyl endopeptidase; a 41.6 77 0.0027 32.3 8.7 29 88-116 174-219 (710)
231 2ghs_A AGR_C_1268P; regucalcin 39.4 66 0.0023 29.3 7.1 33 88-121 93-125 (326)
232 1jof_A Carboxy-CIS,CIS-muconat 39.3 69 0.0023 29.4 7.2 16 32-47 61-77 (365)
233 2dg1_A DRP35, lactonase; beta 38.9 71 0.0024 28.3 7.1 32 87-119 137-176 (333)
234 3c5m_A Oligogalacturonate lyas 37.0 47 0.0016 30.0 5.6 34 88-121 241-280 (396)
235 2j04_A TAU60, YPL007P, hypothe 33.6 55 0.0019 34.3 6.0 72 14-117 136-214 (588)
236 3q6k_A 43.2 kDa salivary prote 32.1 82 0.0028 31.0 6.7 64 32-122 124-198 (381)
237 1pjx_A Dfpase, DIISOPROPYLFLUO 32.0 76 0.0026 27.6 6.0 76 13-120 23-106 (314)
238 3dr2_A Exported gluconolactona 31.9 1.8E+02 0.0061 25.8 8.6 33 87-121 241-273 (305)
239 3bg1_A Protein SEC13 homolog; 30.9 43 0.0015 30.1 4.2 33 15-49 270-305 (316)
240 2xyi_A Probable histone-bindin 30.8 71 0.0024 30.1 5.9 21 164-184 243-263 (430)
241 2z2n_A Virginiamycin B lyase; 30.7 1.6E+02 0.0054 25.1 7.7 31 88-119 186-217 (299)
242 2gop_A Trilobed protease; beta 29.2 1.1E+02 0.0038 27.1 6.6 36 88-123 62-103 (347)
243 3azo_A Aminopeptidase; POP fam 29.0 56 0.0019 32.5 5.0 36 88-123 191-239 (662)
244 1k32_A Tricorn protease; prote 29.0 86 0.0029 33.7 6.8 70 18-124 23-99 (1045)
245 1rwi_B Serine/threonine-protei 28.1 2E+02 0.0068 24.3 7.9 20 166-185 246-265 (270)
246 2z2n_A Virginiamycin B lyase; 28.0 1.8E+02 0.0062 24.7 7.6 33 87-120 143-176 (299)
247 2oit_A Nucleoporin 214KDA; NH2 25.4 45 0.0015 32.3 3.4 30 15-47 200-229 (434)
248 2j04_B YDR362CP, TAU91; beta p 23.5 37 0.0013 34.1 2.6 32 14-47 362-393 (524)
249 1mda_H Methylamine dehydrogena 23.3 2.2E+02 0.0075 27.3 7.9 55 32-121 47-112 (368)
No 1
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-52 Score=380.44 Aligned_cols=174 Identities=77% Similarity=1.282 Sum_probs=157.7
Q ss_pred CCCchhccchhhccCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCC
Q psy11868 201 KPSKEDIISATEASGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTG 279 (374)
Q Consensus 201 kp~~e~~~~~~~~~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~G 279 (374)
+|+.|++.+++...+|+...+.++++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||+.++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g 81 (176)
T 2a2n_A 2 SPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTG 81 (176)
T ss_dssp -----------CCCSCCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSS
T ss_pred CcchhhhhhcccCCCCCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCC
Confidence 5778888777777888888999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCC
Q psy11868 280 TGGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKT 359 (374)
Q Consensus 280 tgG~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~ 359 (374)
+||+|+||..|+||+.+.++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|+++++++.+
T Consensus 82 ~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~ 161 (176)
T 2a2n_A 82 MGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKT 161 (176)
T ss_dssp SCCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTT
T ss_pred CCCCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCC
Confidence 99999999999999987899999999999999999999999999999999999999999999999999999999997457
Q ss_pred CCCCCCeEEEEEEEC
Q psy11868 360 DQPYDDIQVISISVK 374 (374)
Q Consensus 360 ~kP~~~I~I~~i~Vk 374 (374)
++|.++|+|.+|+|+
T Consensus 162 ~~P~~~v~I~~v~v~ 176 (176)
T 2a2n_A 162 DKPYEDVSIINITVK 176 (176)
T ss_dssp CCBSSCCBEEEEEEC
T ss_pred CccCCCeEEEEEEEC
Confidence 999999999999985
No 2
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-50 Score=362.69 Aligned_cols=154 Identities=65% Similarity=1.140 Sum_probs=149.5
Q ss_pred cceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCC
Q psy11868 220 YDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHL 298 (374)
Q Consensus 220 ~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~L 298 (374)
...++++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+||||||||.++|+||+++||..|+||+.+.+
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l 84 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHL 84 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTB
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCCc
Confidence 457999999999999999 9999999999999999999999999999999999999999999999999999999998889
Q ss_pred CCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEEEEEEC
Q psy11868 299 KHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISVK 374 (374)
Q Consensus 299 kH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~~i~Vk 374 (374)
+|+++|+|||||++||+|+|||||++.++||||++|+|||+|++|||||++|++++++ .+++|.++|+|.+|+|.
T Consensus 85 ~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~-~~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 85 NHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTD-KRDKPLEDIKILNIKIN 159 (160)
T ss_dssp CSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-TTSCBSSCCBEEEEEEC
T ss_pred ccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcC-CCCCcCCCeEEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999998 68999999999999984
No 3
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=6e-50 Score=359.80 Aligned_cols=153 Identities=52% Similarity=0.900 Sum_probs=148.6
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLK 299 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~Lk 299 (374)
..++++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||++++|+||+|+||..|++|+.+.++
T Consensus 12 ~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 91 (166)
T 2x7k_A 12 PNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLK 91 (166)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTSC
T ss_pred CEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCccccccccccC
Confidence 57999999999999999 99999999999999999999999999999999999999999999999999999999888999
Q ss_pred CCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEEEEEEC
Q psy11868 300 HDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISVK 374 (374)
Q Consensus 300 H~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~~i~Vk 374 (374)
|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ ..++|.++|+|.+|+|.
T Consensus 92 h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~-~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 92 FTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETN-SQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp CCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBC-TTSCBSSCCEEEEEEEC
T ss_pred CCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcC-CCCCcCCCeEEEEEEEe
Confidence 998999999999999999999999999999999999999999999999999999998 67899999999999873
No 4
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=9.1e-50 Score=356.80 Aligned_cols=152 Identities=53% Similarity=0.920 Sum_probs=146.6
Q ss_pred eEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCCC
Q psy11868 222 SAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLKH 300 (374)
Q Consensus 222 ~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~LkH 300 (374)
.++++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||+.++|+||+++||..|++|+.+.++|
T Consensus 2 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 81 (161)
T 2ok3_A 2 SVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKH 81 (161)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcCc
Confidence 4789999999999999 999999999999999999999999999999999999999999999999999999998888999
Q ss_pred CCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEEEEEE
Q psy11868 301 DRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISV 373 (374)
Q Consensus 301 ~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~~i~V 373 (374)
+++|+|||||++||+|+|||||++.++||||++|+|||+|++|||||++|++++++..+++|.++|+|.+|+|
T Consensus 82 ~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i 154 (161)
T 2ok3_A 82 NVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154 (161)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEE
T ss_pred CCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999833399999999999987
No 5
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=4.1e-49 Score=358.28 Aligned_cols=158 Identities=44% Similarity=0.783 Sum_probs=151.2
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc-----------CCccCCcEEEEEEcCeEEeeCCCC-CCCC
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK-----------NNYYNGHIFHRVIKGFMIQTGDPT-GTGT 280 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k-----------~GyY~gt~FhRVi~~f~IQgGDp~-g~Gt 280 (374)
.+|++++|+++.+|++|+|+|+|| +.||+||+||+.||+ .+||+|+.||||+|+|||||||++ ++|+
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 87 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGR 87 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCC
Confidence 368899999999999999999999 999999999999995 679999999999999999999986 8999
Q ss_pred CCccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCC
Q psy11868 281 GGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTD 360 (374)
Q Consensus 281 gG~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~ 360 (374)
||+|+||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ .++
T Consensus 88 gg~si~g~~f~dE~-~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~-~~~ 165 (179)
T 2wfi_A 88 GGESIYGGFFEDES-FAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTD-AAS 165 (179)
T ss_dssp CCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBC-TTS
T ss_pred CCCcccCCcccccc-cCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCC-CCC
Confidence 99999999999996 5799999999999999999999999999999999999999999999999999999999998 689
Q ss_pred CCCCCeEEEEEEE
Q psy11868 361 QPYDDIQVISISV 373 (374)
Q Consensus 361 kP~~~I~I~~i~V 373 (374)
+|.++|+|.+|.+
T Consensus 166 ~P~~~v~I~~~G~ 178 (179)
T 2wfi_A 166 KPFAEVRILSCGE 178 (179)
T ss_dssp CBSSCEEEEEEEE
T ss_pred CCCCCeEEEeCee
Confidence 9999999999975
No 6
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=6.8e-49 Score=356.16 Aligned_cols=158 Identities=49% Similarity=0.799 Sum_probs=150.8
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcC--------C---ccCCcEEEEEEcCeEEeeCCCC-CCCC
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKN--------N---YYNGHIFHRVIKGFMIQTGDPT-GTGT 280 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~--------G---yY~gt~FhRVi~~f~IQgGDp~-g~Gt 280 (374)
.+|++++|+++.+|++|+|+|+|| +.||+||+||+.||++ | ||+|+.||||+|+|||||||++ ++|+
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 84 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGT 84 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCC
Confidence 468899999999999999999999 9999999999999984 4 9999999999999999999986 8999
Q ss_pred CCccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCC
Q psy11868 281 GGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTD 360 (374)
Q Consensus 281 gG~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~ 360 (374)
||+|+||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ .++
T Consensus 85 gg~si~g~~f~dE~-~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~-~~~ 162 (177)
T 1a58_A 85 GGESIYGGMFDDEE-FVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTN-SKN 162 (177)
T ss_dssp CCCCTTSSCBCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-TTS
T ss_pred CCCcccCCcccCcc-cCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCC-CCC
Confidence 99999999999997 4789999999999999999999999999999999999999999999999999999999998 679
Q ss_pred CCCCCeEEEEEEE
Q psy11868 361 QPYDDIQVISISV 373 (374)
Q Consensus 361 kP~~~I~I~~i~V 373 (374)
+|.++|+|.+|.+
T Consensus 163 ~P~~~v~I~~~G~ 175 (177)
T 1a58_A 163 RPLADVVILNCGE 175 (177)
T ss_dssp CBSSCEEEEEEEE
T ss_pred cCCCCeEEEEeEE
Confidence 9999999999975
No 7
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=4.9e-49 Score=362.61 Aligned_cols=152 Identities=47% Similarity=0.803 Sum_probs=148.2
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLK 299 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~Lk 299 (374)
..|+++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||++++|+||+|+||..|++|+.+.++
T Consensus 39 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 118 (196)
T 2b71_A 39 GYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKELK 118 (196)
T ss_dssp CEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTTCC
T ss_pred cEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCCcC
Confidence 57899999999999999 99999999999999999999999999999999999999999999999999999999888999
Q ss_pred CCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEEEEEE
Q psy11868 300 HDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISV 373 (374)
Q Consensus 300 H~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~~i~V 373 (374)
|+++|+|||||++||+||||||||+.++||||++|+|||+|++|||||++|++++++ .+++|.++|+|.+|+|
T Consensus 119 h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~~~~P~~~i~I~~~~i 191 (196)
T 2b71_A 119 HTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTT-ATNKPIFDLKILRTST 191 (196)
T ss_dssp CCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-TTCCBSSCCEEEEEEC
T ss_pred cCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcC-CCCCCCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999999999999999999998 6799999999999987
No 8
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.8e-49 Score=361.14 Aligned_cols=152 Identities=49% Similarity=0.868 Sum_probs=147.6
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLK 299 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~Lk 299 (374)
..|+++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||++++|+||+++||..|++|+.+.++
T Consensus 20 ~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~dE~~~~l~ 99 (197)
T 1zkc_A 20 GYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLS 99 (197)
T ss_dssp EEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCCCCCTTCC
T ss_pred cEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCccccccCcCcC
Confidence 56999999999999999 99999999999999999999999999999999999999999999999999999999888999
Q ss_pred CCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCC-CCCCCCeEEEEEEE
Q psy11868 300 HDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKT-DQPYDDIQVISISV 373 (374)
Q Consensus 300 H~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~-~kP~~~I~I~~i~V 373 (374)
|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ .+ ++|.++|+|.+|.|
T Consensus 100 h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~~~~~P~~~i~I~~~~v 173 (197)
T 1zkc_A 100 HTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESD-PKTDRPKEEIRIDATTV 173 (197)
T ss_dssp SCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBC-TTTCCBSSCCEEEEEEE
T ss_pred CCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCC-CCCCCcCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999999999999999999998 44 99999999999987
No 9
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=6.5e-49 Score=358.78 Aligned_cols=152 Identities=45% Similarity=0.812 Sum_probs=147.4
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLK 299 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~Lk 299 (374)
..++++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||++++|+||+++||..|++|+.+.++
T Consensus 17 ~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 96 (185)
T 2poe_A 17 QGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPELK 96 (185)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCCCCTTSC
T ss_pred eEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccccCCCc
Confidence 45788899999999999 99999999999999999999999999999999999999999999999999999999888999
Q ss_pred CCCcceEeecccC----CCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEEEEEE
Q psy11868 300 HDRPYTVSMANAG----PNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISV 373 (374)
Q Consensus 300 H~r~G~VSman~g----pntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~~i~V 373 (374)
|+++|+|||||++ ||+||||||||+.++||||++|+|||+|++|||||++|++++++ .+++|.++|+|.+|.|
T Consensus 97 h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~~~~P~~~v~I~~~~i 173 (185)
T 2poe_A 97 YDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSD-KSHKPIDEIIIKDIVI 173 (185)
T ss_dssp CCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBC-TTSCBSSCCEEEEEEE
T ss_pred cCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcC-CCCCcCCCeEEEEEEE
Confidence 9999999999999 99999999999999999999999999999999999999999998 6799999999999987
No 10
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=9e-49 Score=359.79 Aligned_cols=158 Identities=50% Similarity=0.830 Sum_probs=150.9
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc-----------CCccCCcEEEEEEcCeEEeeCCCC-CCCC
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK-----------NNYYNGHIFHRVIKGFMIQTGDPT-GTGT 280 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k-----------~GyY~gt~FhRVi~~f~IQgGDp~-g~Gt 280 (374)
..|++++|+++.+|++|+|+|||| +.||+||+||+.||+ .+||+|+.||||+|+|||||||++ ++|+
T Consensus 18 ~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~ 97 (192)
T 2he9_A 18 GSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGK 97 (192)
T ss_dssp -CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCC
Confidence 468899999999999999999999 999999999999994 679999999999999999999986 8999
Q ss_pred CCccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCC
Q psy11868 281 GGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTD 360 (374)
Q Consensus 281 gG~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~ 360 (374)
||+|+||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ .++
T Consensus 98 gg~siyg~~f~dE~-~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~~~ 175 (192)
T 2he9_A 98 GGESIYGGYFKDEN-FILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTD-AAS 175 (192)
T ss_dssp CCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-TTS
T ss_pred CCCcccCCcccCcc-ccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcC-CCC
Confidence 99999999999996 5799999999999999999999999999999999999999999999999999999999998 689
Q ss_pred CCCCCeEEEEEEE
Q psy11868 361 QPYDDIQVISISV 373 (374)
Q Consensus 361 kP~~~I~I~~i~V 373 (374)
+|.++|+|.+|.+
T Consensus 176 ~P~~~v~I~~~g~ 188 (192)
T 2he9_A 176 RPYADVRVIDCGV 188 (192)
T ss_dssp CBSSCEEEEEEEE
T ss_pred CCcCCeEEEEeEE
Confidence 9999999999986
No 11
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1e-48 Score=355.17 Aligned_cols=158 Identities=42% Similarity=0.713 Sum_probs=151.8
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCc--------cCCcEEEEEEcCeEEeeCCCC-CCCCCCc
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNY--------YNGHIFHRVIKGFMIQTGDPT-GTGTGGQ 283 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~Gy--------Y~gt~FhRVi~~f~IQgGDp~-g~GtgG~ 283 (374)
.+|++++++.+.+|++|+|+|||| +.||+||+||+.||+.+| |+|+.||||+|+|||||||++ ++|+||+
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~ 88 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVA 88 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCC
Confidence 467899999999999999999999 999999999999999998 999999999999999999986 8999999
Q ss_pred cccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCC
Q psy11868 284 SIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPY 363 (374)
Q Consensus 284 si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~ 363 (374)
|+||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ .+++|.
T Consensus 89 si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~-~~~~P~ 166 (177)
T 1mzw_A 89 SIYRGPFADEN-FKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTG-PNNKPK 166 (177)
T ss_dssp CTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-GGGCBS
T ss_pred ccCCCcccCcc-cccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcC-CCCCCC
Confidence 99999999996 5899999999999999999999999999999999999999999999999999999999998 689999
Q ss_pred CCeEEEEEEE
Q psy11868 364 DDIQVISISV 373 (374)
Q Consensus 364 ~~I~I~~i~V 373 (374)
++|+|.+|.+
T Consensus 167 ~~v~I~~cG~ 176 (177)
T 1mzw_A 167 LPVVISQCGE 176 (177)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEecee
Confidence 9999999975
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.4e-48 Score=352.91 Aligned_cols=156 Identities=48% Similarity=0.814 Sum_probs=149.9
Q ss_pred CceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhh--cCCc-cCCcEEEEEEcCeEEeeCC-CCCCCCCCccccCCC
Q psy11868 215 GEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHS--KNNY-YNGHIFHRVIKGFMIQTGD-PTGTGTGGQSIWGGE 289 (374)
Q Consensus 215 ~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~--k~Gy-Y~gt~FhRVi~~f~IQgGD-p~g~GtgG~si~G~~ 289 (374)
.+++++|+.+.+|++|+|+|+|| +.||+||+||+.|| +.|| |+|+.||||+|+||||||| +.++|+||+|+||..
T Consensus 11 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 90 (172)
T 2haq_A 11 TAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEK 90 (172)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSC
T ss_pred CCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCc
Confidence 57899999999999999999999 99999999999999 7899 9999999999999999999 678999999999999
Q ss_pred CcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEE
Q psy11868 290 FKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVI 369 (374)
Q Consensus 290 f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~ 369 (374)
|+|| ...++|+ +|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ ..++|.++|+|.
T Consensus 91 f~dE-~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~-~~~~P~~~v~I~ 167 (172)
T 2haq_A 91 FADE-NLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTN-SHDRPVKPVKIV 167 (172)
T ss_dssp BCCC-CCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-GGGCBSSCEEEE
T ss_pred ccCc-CCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcC-CCCcCCCCeEEE
Confidence 9999 4789999 899999999999999999999999999999999999999999999999999998 678999999999
Q ss_pred EEEE
Q psy11868 370 SISV 373 (374)
Q Consensus 370 ~i~V 373 (374)
+|.+
T Consensus 168 ~~g~ 171 (172)
T 2haq_A 168 ASGE 171 (172)
T ss_dssp EEEE
T ss_pred EeEE
Confidence 9975
No 13
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3.2e-48 Score=347.59 Aligned_cols=156 Identities=41% Similarity=0.731 Sum_probs=150.2
Q ss_pred CceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc--CCc-cCCcEEEEEEcCeEEeeCC-CCCCCCCCccccCCC
Q psy11868 215 GEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK--NNY-YNGHIFHRVIKGFMIQTGD-PTGTGTGGQSIWGGE 289 (374)
Q Consensus 215 ~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k--~Gy-Y~gt~FhRVi~~f~IQgGD-p~g~GtgG~si~G~~ 289 (374)
+|++++|+.+..|++|+|+|||| +.||+||+||+.||+ .|| |+|+.||||+|+||||||| +.++|+|++++||..
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 81 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEK 81 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcc
Confidence 68899999999999999999999 999999999999999 889 9999999999999999999 678999999999999
Q ss_pred CcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEE
Q psy11868 290 FKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVI 369 (374)
Q Consensus 290 f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~ 369 (374)
|++|. ..++|+++|+|||||.+|++|+||||||+.++||||++|+|||+|++|||||++|++++++ +++|.++|+|.
T Consensus 82 ~~dE~-~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~--~~~P~~~v~I~ 158 (164)
T 3pmp_A 82 FADEN-FQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA--SGKTNATIKIT 158 (164)
T ss_dssp BCCCC-CCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT--TCCCSSCEEEE
T ss_pred ccccc-cccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC--CCCcccCEEEE
Confidence 99994 7899999999999999999999999999999999999999999999999999999999986 69999999999
Q ss_pred EEEE
Q psy11868 370 SISV 373 (374)
Q Consensus 370 ~i~V 373 (374)
+|.+
T Consensus 159 ~cg~ 162 (164)
T 3pmp_A 159 DCGT 162 (164)
T ss_dssp EEEE
T ss_pred eCeE
Confidence 9986
No 14
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=3.1e-48 Score=348.27 Aligned_cols=156 Identities=45% Similarity=0.693 Sum_probs=149.7
Q ss_pred CceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc--CCc-cCCcEEEEEEcCeEEeeCCCC-CCCCCCccccCCC
Q psy11868 215 GEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK--NNY-YNGHIFHRVIKGFMIQTGDPT-GTGTGGQSIWGGE 289 (374)
Q Consensus 215 ~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k--~Gy-Y~gt~FhRVi~~f~IQgGDp~-g~GtgG~si~G~~ 289 (374)
+|++++|+.+.+|++|+|+|+|| +.||+||+||+.||+ .|| |+|+.||||+|+|||||||++ ++|+||+|+||..
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 82 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR 82 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCc
Confidence 57899999999999999999999 999999999999999 999 999999999999999999996 7899999999999
Q ss_pred CcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEE
Q psy11868 290 FKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVI 369 (374)
Q Consensus 290 f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~ 369 (374)
|+||. +.++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|+++++ .+++|.++|+|.
T Consensus 83 f~dE~-~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~--~~~~P~~~v~I~ 159 (165)
T 2z6w_A 83 FPDEN-FTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS--KSGRTSKKIVIT 159 (165)
T ss_dssp BCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC--TTSCCSSCEEEE
T ss_pred ccCcc-cccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC--CCCCCCCcEEEE
Confidence 99995 689999999999999999999999999999999999999999999999999999999986 579999999999
Q ss_pred EEEE
Q psy11868 370 SISV 373 (374)
Q Consensus 370 ~i~V 373 (374)
+|.+
T Consensus 160 ~~g~ 163 (165)
T 2z6w_A 160 DCGQ 163 (165)
T ss_dssp EEEE
T ss_pred EeEE
Confidence 9975
No 15
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3.8e-48 Score=350.19 Aligned_cols=158 Identities=42% Similarity=0.673 Sum_probs=149.4
Q ss_pred ccCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc--CCc-cCCcEEEEEEcCeEEeeCCCC-CCCCCCccccC
Q psy11868 213 ASGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK--NNY-YNGHIFHRVIKGFMIQTGDPT-GTGTGGQSIWG 287 (374)
Q Consensus 213 ~~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k--~Gy-Y~gt~FhRVi~~f~IQgGDp~-g~GtgG~si~G 287 (374)
..+|++++++.+.+|++|+|+|+|| +.||+||+||+.||+ .|| |+|+.||||+|+|||||||++ ++|+||+++||
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g 88 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYG 88 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTB
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCC
Confidence 3468899999999999999999999 999999999999994 787 999999999999999999987 78999999999
Q ss_pred CCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeE
Q psy11868 288 GEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQ 367 (374)
Q Consensus 288 ~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~ 367 (374)
..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ +++|.++|+
T Consensus 89 ~~f~dE~-~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~--~~~P~~~v~ 165 (173)
T 2r99_A 89 KKFDDEN-FILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK--DGKPKQKVI 165 (173)
T ss_dssp SCBCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT--TCCCSSCEE
T ss_pred CcccCcc-cCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC--CCCCCCCeE
Confidence 9999996 6899999999999999999999999999999999999999999999999999999999885 689999999
Q ss_pred EEEEEE
Q psy11868 368 VISISV 373 (374)
Q Consensus 368 I~~i~V 373 (374)
|.+|.+
T Consensus 166 I~~cG~ 171 (173)
T 2r99_A 166 IADCGE 171 (173)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 999975
No 16
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=3.4e-48 Score=350.34 Aligned_cols=157 Identities=41% Similarity=0.657 Sum_probs=149.4
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcC--Cc-cCCcEEEEEEcCeEEeeCCCC-CCCCCCccccCC
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKN--NY-YNGHIFHRVIKGFMIQTGDPT-GTGTGGQSIWGG 288 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~--Gy-Y~gt~FhRVi~~f~IQgGDp~-g~GtgG~si~G~ 288 (374)
.+|++++++.+.+|++|+|+|+|| +.||+||+||+.||+. || |+|+.||||+|+|||||||++ ++|+||+|+||.
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~ 88 (172)
T 2cmt_A 9 NLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGR 88 (172)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred CCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCC
Confidence 367899999999999999999999 9999999999999984 88 999999999999999999987 789999999999
Q ss_pred CCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEE
Q psy11868 289 EFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQV 368 (374)
Q Consensus 289 ~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I 368 (374)
.|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ +++|.++|+|
T Consensus 89 ~f~dE~-~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~--~~~P~~~v~I 165 (172)
T 2cmt_A 89 KFDDEN-FQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSK--SGKVKEPVII 165 (172)
T ss_dssp CBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCT--TCCCSSCEEE
T ss_pred cccccc-cCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC--CCCCCCCEEE
Confidence 999996 5899999999999999999999999999999999999999999999999999999999985 6899999999
Q ss_pred EEEEE
Q psy11868 369 ISISV 373 (374)
Q Consensus 369 ~~i~V 373 (374)
.+|.+
T Consensus 166 ~~~g~ 170 (172)
T 2cmt_A 166 SRCGE 170 (172)
T ss_dssp EEEEE
T ss_pred EEeEe
Confidence 99975
No 17
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-48 Score=358.61 Aligned_cols=152 Identities=36% Similarity=0.597 Sum_probs=140.9
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeC-----CCCCCCCCCcccc-------C
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTG-----DPTGTGTGGQSIW-------G 287 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgG-----Dp~g~GtgG~si~-------G 287 (374)
..|+++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||| ||+++|+||+|+| |
T Consensus 7 ~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~~g 86 (201)
T 3bo7_A 7 GYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFPGG 86 (201)
T ss_dssp EEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSSTTC
T ss_pred eEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCccccccccccCC
Confidence 46899999999999999 999999999999999999999999999999999999 9999999999999 8
Q ss_pred CCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeE
Q psy11868 288 GEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQ 367 (374)
Q Consensus 288 ~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~ 367 (374)
..|++|+++.++|+++|+|||||++||+||||||||+.++||||++|+|||+|++|||||++|++++++ .+++|.++|+
T Consensus 87 ~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~~~~P~~~i~ 165 (201)
T 3bo7_A 87 APFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETD-KKDKPLKPPK 165 (201)
T ss_dssp CCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBC-TTSCBSSCCB
T ss_pred CcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcC-CCCCcCCCeE
Confidence 999999888999999999999999999999999999999999999999999999999999999999998 6799999999
Q ss_pred EEEEEE
Q psy11868 368 VISISV 373 (374)
Q Consensus 368 I~~i~V 373 (374)
|.+|.|
T Consensus 166 I~~~~v 171 (201)
T 3bo7_A 166 VEEIIV 171 (201)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999987
No 18
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=2.9e-48 Score=350.89 Aligned_cols=156 Identities=43% Similarity=0.720 Sum_probs=148.9
Q ss_pred CceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcC--C--------ccCCcEEEEEEcCeEEeeCCCC-CCCCCC
Q psy11868 215 GEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKN--N--------YYNGHIFHRVIKGFMIQTGDPT-GTGTGG 282 (374)
Q Consensus 215 ~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~--G--------yY~gt~FhRVi~~f~IQgGDp~-g~GtgG 282 (374)
+|++++|+.+.+|++|+|+|+|| +.||+||+||+.||+. | ||+|+.||||+|+|||||||++ ++|+||
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 82 (173)
T 2igv_A 3 RSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGG 82 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCC
Confidence 57899999999999999999999 9999999999999986 5 7999999999999999999986 889999
Q ss_pred ccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q psy11868 283 QSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQP 362 (374)
Q Consensus 283 ~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP 362 (374)
+|+||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ +++|
T Consensus 83 ~siyg~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~--~~~P 159 (173)
T 2igv_A 83 ESIYGEKFPDEN-FKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQ--SGKP 159 (173)
T ss_dssp CBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT--TSCC
T ss_pred CccCCCcccCcc-cccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCC--CCCC
Confidence 999999999996 5899999999999999999999999999999999999999999999999999999999985 6899
Q ss_pred CCCeEEEEEEE
Q psy11868 363 YDDIQVISISV 373 (374)
Q Consensus 363 ~~~I~I~~i~V 373 (374)
.++|+|.+|.+
T Consensus 160 ~~~v~I~~~g~ 170 (173)
T 2igv_A 160 VKDCMIADCGQ 170 (173)
T ss_dssp SSCEEEEEEEE
T ss_pred CCCEEEEEeEE
Confidence 99999999975
No 19
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.1e-48 Score=355.13 Aligned_cols=157 Identities=48% Similarity=0.790 Sum_probs=149.9
Q ss_pred CceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc--CCc-cCCcEEEEEEcCeEEeeCC-CCCCCCCCccccCCC
Q psy11868 215 GEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK--NNY-YNGHIFHRVIKGFMIQTGD-PTGTGTGGQSIWGGE 289 (374)
Q Consensus 215 ~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k--~Gy-Y~gt~FhRVi~~f~IQgGD-p~g~GtgG~si~G~~ 289 (374)
.+++++++.+.+|++|+|+|+|| +.||+||+||+.||+ .|| |+|+.||||+|+||||||| +.++|+||+|+||..
T Consensus 15 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 94 (188)
T 3ich_A 15 TVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGER 94 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCc
Confidence 46789999999999999999999 999999999999995 789 9999999999999999999 679999999999999
Q ss_pred CcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEE
Q psy11868 290 FKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVI 369 (374)
Q Consensus 290 f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~ 369 (374)
|+|| ...++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ ..++|.++|+|.
T Consensus 95 f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~~P~~~v~I~ 172 (188)
T 3ich_A 95 FPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTD-SRDKPLKDVIIA 172 (188)
T ss_dssp BCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-TTSCBSSCEEEE
T ss_pred cccc-ccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcC-CCCeECCCEEEE
Confidence 9999 47899999999999999999999999999999999999999999999999999999999998 678999999999
Q ss_pred EEEE
Q psy11868 370 SISV 373 (374)
Q Consensus 370 ~i~V 373 (374)
+|.+
T Consensus 173 ~~~~ 176 (188)
T 3ich_A 173 DCGK 176 (188)
T ss_dssp EEEE
T ss_pred EeEE
Confidence 9975
No 20
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=4.1e-48 Score=348.97 Aligned_cols=156 Identities=45% Similarity=0.763 Sum_probs=149.3
Q ss_pred CceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc-CCc--------cCCcEEEEEEcCeEEeeCCCC-CCCCCCc
Q psy11868 215 GEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK-NNY--------YNGHIFHRVIKGFMIQTGDPT-GTGTGGQ 283 (374)
Q Consensus 215 ~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k-~Gy--------Y~gt~FhRVi~~f~IQgGDp~-g~GtgG~ 283 (374)
+|++++|+.+.+|++|+|+|+|| +.||+||+||+.||+ .|| |+|+.||||+|+|||||||++ ++|+||+
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~ 82 (170)
T 1qng_A 3 RSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGE 82 (170)
T ss_dssp SCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCC
T ss_pred CCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCc
Confidence 57899999999999999999999 999999999999998 589 999999999999999999986 8999999
Q ss_pred cccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCC
Q psy11868 284 SIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPY 363 (374)
Q Consensus 284 si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~ 363 (374)
|+||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|+++++ .+++|.
T Consensus 83 si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t--~~~~P~ 159 (170)
T 1qng_A 83 SIYGRSFTDEN-FNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA--KSGYVK 159 (170)
T ss_dssp BTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC--TTCCCS
T ss_pred cccCCcccccc-cccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC--CCCCCC
Confidence 99999999996 689999999999999999999999999999999999999999999999999999999998 479999
Q ss_pred CCeEEEEEEE
Q psy11868 364 DDIQVISISV 373 (374)
Q Consensus 364 ~~I~I~~i~V 373 (374)
++|+|.+|.+
T Consensus 160 ~~v~I~~cG~ 169 (170)
T 1qng_A 160 RSVVITDCGE 169 (170)
T ss_dssp SCEEEEEEEE
T ss_pred CCeEEEecee
Confidence 9999999975
No 21
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=3.4e-48 Score=358.67 Aligned_cols=153 Identities=52% Similarity=0.900 Sum_probs=148.4
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLK 299 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~Lk 299 (374)
..|+++|++|+|+|+|| +.||+||+||+.||+.+||+|+.||||+|+|||||||++++|++++++||..|++|+.+.++
T Consensus 12 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~~~l~ 91 (203)
T 2k7n_A 12 PNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLK 91 (203)
T ss_dssp SEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCCCSSC
T ss_pred CEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCccccccccccc
Confidence 57999999999999999 99999999999999999999999999999999999999999999999999999999888999
Q ss_pred CCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEEEEEEC
Q psy11868 300 HDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISVK 374 (374)
Q Consensus 300 H~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~~i~Vk 374 (374)
|+++|+|||||.+||+|+||||||+.++||||++|+|||+|++|||||++|++++++ ..++|.++|+|.+|+|.
T Consensus 92 h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~-~~~~P~~~V~I~~~~v~ 165 (203)
T 2k7n_A 92 FTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETN-SQDRPVDDVKIIKAYPS 165 (203)
T ss_dssp CCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEE-ETTEECCCCBEEEEEEC
T ss_pred CCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcC-CCCCcCCCeEEEEEEEE
Confidence 998999999999999999999999999999999999999999999999999999998 67899999999999873
No 22
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=2.2e-47 Score=350.35 Aligned_cols=150 Identities=51% Similarity=0.882 Sum_probs=143.5
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhh---------------cCCccCCcEEEEEEcCeEEeeCCCCCCCCCCcc
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHS---------------KNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQS 284 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~---------------k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~s 284 (374)
..|+++|++|+|+|+|| +.||+||+||+.|| +.+||+|+.||||+|+|||||||+.++|+||
T Consensus 24 ~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~G~gg-- 101 (191)
T 1w74_A 24 ATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGG-- 101 (191)
T ss_dssp EEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSSSSCC--
T ss_pred eEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCCCCCC--
Confidence 46899999999999999 99999999999999 4689999999999999999999999999888
Q ss_pred ccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEe--CHHHHHHHhcCCCCCCCCCC
Q psy11868 285 IWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTK--GMEVVQNISNVKTNHKTDQP 362 (374)
Q Consensus 285 i~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVie--GmdVL~~Ie~~~td~~~~kP 362 (374)
||..|+||+.+.++|+++|+|||||+|||+|+||||||+.++||||++|+|||+|++ |||||++|++++++ .+++|
T Consensus 102 -~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~-~~~~P 179 (191)
T 1w74_A 102 -PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATD-GNDRP 179 (191)
T ss_dssp -SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBC-TTSCB
T ss_pred -CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcC-CCCCc
Confidence 689999998789999999999999999999999999999999999999999999999 99999999999998 67999
Q ss_pred CCCeEEEEEEEC
Q psy11868 363 YDDIQVISISVK 374 (374)
Q Consensus 363 ~~~I~I~~i~Vk 374 (374)
.++|+|.+|+|.
T Consensus 180 ~~~v~I~~~~i~ 191 (191)
T 1w74_A 180 TDPVVIESITIS 191 (191)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEC
Confidence 999999999984
No 23
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1e-47 Score=361.17 Aligned_cols=179 Identities=38% Similarity=0.565 Sum_probs=151.6
Q ss_pred CcccccCCCCCchhcc--------ch---hhccCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCC------
Q psy11868 193 TDRDVFNEKPSKEDII--------SA---TEASGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNN------ 254 (374)
Q Consensus 193 ~~rd~~~ekp~~e~~~--------~~---~~~~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~G------ 254 (374)
.++++++|+|...... .. ..+.+|++++++.+.+|++|+|+|||| +.||+||+||+.||+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~ 105 (229)
T 1z81_A 26 DSENKKVENLVLDDNDENTIIPYYLSNLLTNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNL 105 (229)
T ss_dssp ------------------CCSCCCGGGGSSSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSS
T ss_pred CCccccCCCCccccccccccccccccccccCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCC
Confidence 4677888887753211 11 223467889999999999999999999 99999999999999987
Q ss_pred --ccCCcEEEEEEcCeEEeeCCCC-CCCCCCccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCC
Q psy11868 255 --YYNGHIFHRVIKGFMIQTGDPT-GTGTGGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLD 331 (374)
Q Consensus 255 --yY~gt~FhRVi~~f~IQgGDp~-g~GtgG~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LD 331 (374)
||+|+.||||+|+|||||||++ ++|+||+++||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||
T Consensus 106 ~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siyg~~f~dE~-~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LD 184 (229)
T 1z81_A 106 PVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYGEKFDDEN-FDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLD 184 (229)
T ss_dssp BCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTTBSCCCCCC-CCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGB
T ss_pred CceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccCCCcccccc-cccccCCCcEEEeccCCCCCcccEEEEECCCCcccC
Confidence 7999999999999999999985 899999999999999996 689999999999999999999999999999999999
Q ss_pred CCCeEEEEEE--eCHHHHHHHhcCCCCCCC-CCCCCCeEEEEEEE
Q psy11868 332 NKHTVFGRVT--KGMEVVQNISNVKTNHKT-DQPYDDIQVISISV 373 (374)
Q Consensus 332 gk~tVFGrVi--eGmdVL~~Ie~~~td~~~-~kP~~~I~I~~i~V 373 (374)
++|+|||+|+ +|||||++|++++++ .+ ++|.++|+|.+|.+
T Consensus 185 g~~tVFG~Vv~~eGmdVv~~I~~~~t~-~~~~~P~~~V~I~~cG~ 228 (229)
T 1z81_A 185 GKNVVFGRIIDNDSLLLLKKIENVSVT-PYIYKPKIPINVVECGE 228 (229)
T ss_dssp TTBCEEEEECSHHHHHHHHHHHHSCBC-TTTCCBSSCEEEEEEEE
T ss_pred CCeeEEEEEEecCcHHHHHHHHhCCCC-CCCCCCCCCeEEEeCee
Confidence 9999999999 999999999999998 44 99999999999975
No 24
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.4e-47 Score=348.78 Aligned_cols=157 Identities=47% Similarity=0.815 Sum_probs=148.0
Q ss_pred ccCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc--CCc--------cCCcEEEEEEcCeEEeeCCCC-CCCC
Q psy11868 213 ASGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK--NNY--------YNGHIFHRVIKGFMIQTGDPT-GTGT 280 (374)
Q Consensus 213 ~~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k--~Gy--------Y~gt~FhRVi~~f~IQgGDp~-g~Gt 280 (374)
..+|++++++.+.+|+.|+|+|+|| +.||+||+||+.||+ .|| |+|+.||||+|+|||||||++ ++|+
T Consensus 17 ~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~ 96 (186)
T 2poy_A 17 QGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGT 96 (186)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCC
Confidence 3468899999999999999999999 999999999999996 588 999999999999999999986 8899
Q ss_pred CCccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCC
Q psy11868 281 GGQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTD 360 (374)
Q Consensus 281 gG~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~ 360 (374)
||+|+||..|+||. ..++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++|||||++|++++++ ++
T Consensus 97 gg~si~g~~f~dE~-~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~--~~ 173 (186)
T 2poy_A 97 GGESIYGSKFRDEN-FVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQ--NG 173 (186)
T ss_dssp CCCCTTC-CBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCT--TS
T ss_pred CCCccCCCcccCcc-cccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCC--CC
Confidence 99999999999996 6899999999999999999999999999999999999999999999999999999999984 68
Q ss_pred CCCCCeEEEEEE
Q psy11868 361 QPYDDIQVISIS 372 (374)
Q Consensus 361 kP~~~I~I~~i~ 372 (374)
+|.++|+|.+|.
T Consensus 174 ~P~~~v~I~~cG 185 (186)
T 2poy_A 174 KPTKSVCITASG 185 (186)
T ss_dssp CCSSCEEEEEEE
T ss_pred CCCCCEEEEeCC
Confidence 999999999996
No 25
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.2e-47 Score=345.85 Aligned_cols=158 Identities=49% Similarity=0.757 Sum_probs=150.3
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcC--C-ccCCcEEEEEEcCeEEeeCCCC-CCCCCCccccCC
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKN--N-YYNGHIFHRVIKGFMIQTGDPT-GTGTGGQSIWGG 288 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~--G-yY~gt~FhRVi~~f~IQgGDp~-g~GtgG~si~G~ 288 (374)
..+++++++.+..|++|+|+|+|| +.||+||+||+.||++ | ||+|+.||||+|+|||||||++ ++|+||.++||.
T Consensus 11 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~ 90 (185)
T 4fru_A 11 VTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGE 90 (185)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred cCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCC
Confidence 357889999999999999999999 9999999999999975 6 7999999999999999999987 889999999999
Q ss_pred CCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEE
Q psy11868 289 EFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQV 368 (374)
Q Consensus 289 ~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I 368 (374)
.|++|. ..++|+++|+|||||.+||+|+||||||+.++||||++|+|||+|++|||||++|++++++ .+++|.++|+|
T Consensus 91 ~f~de~-~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~-~~~~P~~~v~I 168 (185)
T 4fru_A 91 RFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTD-GRDKPLKDVTI 168 (185)
T ss_dssp CBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC-TTSCBSSCEEE
T ss_pred ccCccc-cccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcCCCCEEE
Confidence 999996 5899999999999999999999999999999999999999999999999999999999998 68999999999
Q ss_pred EEEEE
Q psy11868 369 ISISV 373 (374)
Q Consensus 369 ~~i~V 373 (374)
.+|.+
T Consensus 169 ~~~g~ 173 (185)
T 4fru_A 169 ADCGK 173 (185)
T ss_dssp EEEEE
T ss_pred EEceE
Confidence 99874
No 26
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-46 Score=342.52 Aligned_cols=151 Identities=46% Similarity=0.801 Sum_probs=144.8
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLK 299 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~Lk 299 (374)
..|+++|++|+|+|||| +.||+||+||+.||+.|||+|+.||||+|+|||||||++++|+||+++||..|++|+.+.++
T Consensus 25 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 104 (185)
T 2hq6_A 25 GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLR 104 (185)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTBC
T ss_pred CEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCccccccccCcc
Confidence 45899999999999999 99999999999999999999999999999999999999999999999999999999888899
Q ss_pred CCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHH--HHHhcCCCCCCCCCCCCCeEEEEEEE
Q psy11868 300 HDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVV--QNISNVKTNHKTDQPYDDIQVISISV 373 (374)
Q Consensus 300 H~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL--~~Ie~~~td~~~~kP~~~I~I~~i~V 373 (374)
|+++|+|||||++||+|+||||||+.++||||++|+|||+|+ ||+++ ++|++++++ .+++|.++|+|.+|+|
T Consensus 105 h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~-~~~~P~~~v~I~~~~v 178 (185)
T 2hq6_A 105 FNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDID-DDERPHNPHKIKSCEV 178 (185)
T ss_dssp SCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBC-TTSCBSSCCEEEEEEE
T ss_pred cCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcC-CCCCCCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999999 88874 689999998 7899999999999987
No 27
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=4.4e-46 Score=342.15 Aligned_cols=158 Identities=43% Similarity=0.690 Sum_probs=149.7
Q ss_pred ccCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhc--CCc-cCCcEEEEEEcCeEEeeCC-CCCCCCCCccccC
Q psy11868 213 ASGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSK--NNY-YNGHIFHRVIKGFMIQTGD-PTGTGTGGQSIWG 287 (374)
Q Consensus 213 ~~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k--~Gy-Y~gt~FhRVi~~f~IQgGD-p~g~GtgG~si~G 287 (374)
..+|++++|+.+.+|++|+|+|+|| +.||+||+||+.||+ .|| |+|+.||||+|+||||||| +.++|+||.++||
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g 104 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYG 104 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCC
Confidence 3568899999999999999999999 999999999999998 777 9999999999999999999 5688999999999
Q ss_pred CCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCC--CC
Q psy11868 288 GEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPY--DD 365 (374)
Q Consensus 288 ~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~--~~ 365 (374)
..|++|. ..++|+++|+|||||.+|++|+|||||++.++||||++|+|||+|++|||||++|++++++ +++|. .+
T Consensus 105 ~~f~dE~-~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~--~g~P~~~~~ 181 (193)
T 3k2c_A 105 EKFPDEN-FELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE--SGQVKKGYR 181 (193)
T ss_dssp SCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT--TCCCCTTCC
T ss_pred Ccccccc-cccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC--CCcCccCcc
Confidence 9999994 6899999999999999999999999999999999999999999999999999999999996 57999 99
Q ss_pred eEEEEEEE
Q psy11868 366 IQVISISV 373 (374)
Q Consensus 366 I~I~~i~V 373 (374)
|+|.+|.+
T Consensus 182 v~I~~cG~ 189 (193)
T 3k2c_A 182 IEIRDCGV 189 (193)
T ss_dssp EEEEEEEE
T ss_pred EEEEEceE
Confidence 99999986
No 28
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=3.1e-46 Score=340.81 Aligned_cols=157 Identities=43% Similarity=0.731 Sum_probs=148.6
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCc---cCCcEEEEEEcCeEEeeCCC-CCCCCCCccccCC
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNY---YNGHIFHRVIKGFMIQTGDP-TGTGTGGQSIWGG 288 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~Gy---Y~gt~FhRVi~~f~IQgGDp-~g~GtgG~si~G~ 288 (374)
.+|++++++.+..|++|+|+|+|| +.||+||+||+.||+.++ |+|+.||||+|+|||||||+ .++|+|++++||.
T Consensus 21 ~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~ 100 (184)
T 3rdd_A 21 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGE 100 (184)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred CCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCC
Confidence 468899999999999999999999 999999999999997655 99999999999999999994 5889999999999
Q ss_pred CCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEE
Q psy11868 289 EFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQPYDDIQV 368 (374)
Q Consensus 289 ~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I 368 (374)
.|++|. ..++|+++|+|||||.+||+|+||||||+.++||||++|+|||+|++|||||++|++++++ +++|..+|+|
T Consensus 101 ~~~de~-~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~--~g~P~~~v~I 177 (184)
T 3rdd_A 101 KFEDEN-FILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSR--NGKTSKKITI 177 (184)
T ss_dssp CBCCCC-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT--TSCCSSCEEE
T ss_pred cccCcc-cccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCC--CCCCcCCeEE
Confidence 999996 5799999999999999999999999999999999999999999999999999999999874 7999999999
Q ss_pred EEEEE
Q psy11868 369 ISISV 373 (374)
Q Consensus 369 ~~i~V 373 (374)
.+|.+
T Consensus 178 ~~cG~ 182 (184)
T 3rdd_A 178 ADCGQ 182 (184)
T ss_dssp EEEEE
T ss_pred EeCeE
Confidence 99986
No 29
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=6.4e-47 Score=341.91 Aligned_cols=156 Identities=44% Similarity=0.719 Sum_probs=117.0
Q ss_pred eeecceEEE-----eEeceeEEEEec-ccchHHHHHHHhhhc--CCc-cCCcEEEEEEcCeEEeeCC-CCCCCCCCcccc
Q psy11868 217 QVLYDSAII-----HTSMGDIHLQLF-KECAKTVENFCVHSK--NNY-YNGHIFHRVIKGFMIQTGD-PTGTGTGGQSIW 286 (374)
Q Consensus 217 ~~~~d~vi~-----~Tt~G~I~IeLf-d~aPktveNF~~L~k--~Gy-Y~gt~FhRVi~~f~IQgGD-p~g~GtgG~si~ 286 (374)
++++|+.+. .|++|+|+|+|| +.||+||+||+.||+ .|| |+|+.||||+|+||||||| +.++|+||+|+|
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~ 83 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIY 83 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-------------
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccC
Confidence 567787765 488899999999 999999999999999 778 9999999999999999999 789999999999
Q ss_pred CCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEe--CHHHHHHHhcCCCCCCCCCCCC
Q psy11868 287 GGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTK--GMEVVQNISNVKTNHKTDQPYD 364 (374)
Q Consensus 287 G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVie--GmdVL~~Ie~~~td~~~~kP~~ 364 (374)
|..|+|| .+.++|+++|+|||||++||+|+||||||+.++||||++|+|||+|++ |||||++|++++++..+++|.+
T Consensus 84 g~~f~dE-~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~ 162 (172)
T 2c3b_A 84 GDKFADE-NFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNT 162 (172)
T ss_dssp ----------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSS
T ss_pred CCcccCc-ccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCC
Confidence 9999999 478899999999999999999999999999999999999999999999 9999999999999832239999
Q ss_pred CeEEEEEEE
Q psy11868 365 DIQVISISV 373 (374)
Q Consensus 365 ~I~I~~i~V 373 (374)
+|+|.+|..
T Consensus 163 ~v~I~~cG~ 171 (172)
T 2c3b_A 163 RPKIVNCGE 171 (172)
T ss_dssp CCEEEEEEE
T ss_pred CeEEEeCee
Confidence 999999975
No 30
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.9e-46 Score=348.76 Aligned_cols=151 Identities=40% Similarity=0.688 Sum_probs=143.1
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCcccc--CCCCcccccCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIW--GGEFKDEFKSH 297 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~--G~~f~dE~~~~ 297 (374)
..|+++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||++++|+||+++| |..|++|+.+.
T Consensus 22 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~~f~dE~~~~ 101 (232)
T 3bkp_A 22 GKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGKPFDVETHPR 101 (232)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTCCBCCCCCTT
T ss_pred CEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCCccCCccccC
Confidence 46899999999999999 9999999999999999999999999999999999999999999999999 99999999888
Q ss_pred CCCCCcceEeecccCC--------------CCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHH--HHHHhcCCCCCCCCC
Q psy11868 298 LKHDRPYTVSMANAGP--------------NTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEV--VQNISNVKTNHKTDQ 361 (374)
Q Consensus 298 LkH~r~G~VSman~gp--------------ntngSQFFITl~~~p~LDgk~tVFGrVieGmdV--L~~Ie~~~td~~~~k 361 (374)
++|+++|+|||||.++ ++||||||||+.++||||++|+|||+|+ ||+| |++|++++++ .+++
T Consensus 102 l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~-~~~~ 179 (232)
T 3bkp_A 102 LKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVG-KEDR 179 (232)
T ss_dssp CCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBC-GGGC
T ss_pred cCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcC-CCCC
Confidence 9999999999999987 6999999999999999999999999999 7766 8999999998 6899
Q ss_pred CCCCeEEEEEEE
Q psy11868 362 PYDDIQVISISV 373 (374)
Q Consensus 362 P~~~I~I~~i~V 373 (374)
|+++|+|.+|.|
T Consensus 180 P~~~i~I~~~~v 191 (232)
T 3bkp_A 180 PMTPPFIKSVDV 191 (232)
T ss_dssp BSSCCBEEEEEE
T ss_pred cCCCeEEEEEEE
Confidence 999999999987
No 31
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=9.3e-46 Score=349.03 Aligned_cols=156 Identities=24% Similarity=0.422 Sum_probs=142.7
Q ss_pred cCceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcC-----------------C--c-cCCcEEEEEEcCeEEee
Q psy11868 214 SGEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKN-----------------N--Y-YNGHIFHRVIKGFMIQT 272 (374)
Q Consensus 214 ~~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~-----------------G--y-Y~gt~FhRVi~~f~IQg 272 (374)
..|.+++++.+.+|++|+|+|+|| +.||+||+||+.||++ | | |+|+.||||+|+|||||
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQg 92 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVS 92 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEc
Confidence 467899999998899999999999 9999999999999984 4 7 99999999999999999
Q ss_pred CC-CCCCCCCCccccCCC-----CcccccCCCCCCCcceEeecc----cCCCCCcceEEEEcCC------CCCCCCCCeE
Q psy11868 273 GD-PTGTGTGGQSIWGGE-----FKDEFKSHLKHDRPYTVSMAN----AGPNTNGSQFFITLTP------TPWLDNKHTV 336 (374)
Q Consensus 273 GD-p~g~GtgG~si~G~~-----f~dE~~~~LkH~r~G~VSman----~gpntngSQFFITl~~------~p~LDgk~tV 336 (374)
|| +.++|+||+|+||.. |+ + ..++|+++|+||||| +|||+||||||||+.+ +||||++|+|
T Consensus 93 Gd~~~g~G~Gg~siyg~~~~p~~f~-~--~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tV 169 (234)
T 2ose_A 93 GDIYNSNGSSAGTVYCDEPIPPVFG-D--YFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVV 169 (234)
T ss_dssp CCCC----CCCCCTTTTCCBCCCCC-S--CCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEE
T ss_pred CCccCCCCCCCccccCCccCccccc-C--cCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeE
Confidence 99 679999999999998 76 4 479999999999999 9999999999999999 9999999999
Q ss_pred EEEEEeCHHHHHHHhcCCCCCCCCCCCCCeEEEEEEE
Q psy11868 337 FGRVTKGMEVVQNISNVKTNHKTDQPYDDIQVISISV 373 (374)
Q Consensus 337 FGrVieGmdVL~~Ie~~~td~~~~kP~~~I~I~~i~V 373 (374)
||+|++|||||++|++++++ .+++|.++|+|.+|.+
T Consensus 170 FG~Vv~GmdVv~~I~~~~t~-~~~~P~~~V~I~~~~~ 205 (234)
T 2ose_A 170 IGQVYGGLDVLDKINSMIKP-YAGRKYPTFSIGKCGA 205 (234)
T ss_dssp EEEEEECHHHHHHHHHHTCC-CTTCCCCCEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHhCCcC-CCCCccCCEEEEEEEE
Confidence 99999999999999999998 6799999999999986
No 32
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1.2e-45 Score=331.52 Aligned_cols=149 Identities=38% Similarity=0.577 Sum_probs=138.3
Q ss_pred eEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCCC
Q psy11868 222 SAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLKH 300 (374)
Q Consensus 222 ~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~LkH 300 (374)
.|+++|++|+|+|+|| +.||+||+||+.||+.+||+|+.||||+|+|||||||+++.+ +.+.|+..+++|+...++|
T Consensus 5 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--~~~~~~~~~~~E~~~~l~~ 82 (167)
T 3s6m_A 5 MVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGL--KQKPTDAPIANEANNGLKN 82 (167)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTT--EECCCCCCBCCCGGGCCCC
T ss_pred EEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCC--CCCCCCCccCCcccccccC
Confidence 6899999999999999 999999999999999999999999999999999999997543 4467889999998888888
Q ss_pred CCcceEeecc-cCCCCCcceEEEEcCCCCCCCCC--------CeEEEEEEeCHHHHHHHhcCCCCCC---CCCCCCCeEE
Q psy11868 301 DRPYTVSMAN-AGPNTNGSQFFITLTPTPWLDNK--------HTVFGRVTKGMEVVQNISNVKTNHK---TDQPYDDIQV 368 (374)
Q Consensus 301 ~r~G~VSman-~gpntngSQFFITl~~~p~LDgk--------~tVFGrVieGmdVL~~Ie~~~td~~---~~kP~~~I~I 368 (374)
++|+||||| ++||+||||||||+.++||||++ |+|||+|++|||||++|+++++++. +++|+++|+|
T Consensus 83 -~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I 161 (167)
T 3s6m_A 83 -DTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVVI 161 (167)
T ss_dssp -CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCEE
T ss_pred -CccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeEE
Confidence 579999999 68999999999999999999998 9999999999999999999999832 6899999999
Q ss_pred EEEEE
Q psy11868 369 ISISV 373 (374)
Q Consensus 369 ~~i~V 373 (374)
.+|+|
T Consensus 162 ~~~~i 166 (167)
T 3s6m_A 162 EKAVV 166 (167)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=7.2e-46 Score=332.33 Aligned_cols=149 Identities=35% Similarity=0.548 Sum_probs=137.8
Q ss_pred EEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCCCC
Q psy11868 223 AIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLKHD 301 (374)
Q Consensus 223 vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~LkH~ 301 (374)
|+++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||++.. .|.++||..|++|+.+.++|.
T Consensus 2 v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~--~g~~~~g~~~~dE~~~~l~~~ 79 (164)
T 1lop_A 2 VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG--MKQKATKEPIKNEANNGLKNT 79 (164)
T ss_dssp EEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT--TEECCCCCCBCCCCCSSCCCC
T ss_pred EEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC--CCcCCCCCccccccccccccC
Confidence 789999999999999 99999999999999999999999999999999999999732 267789999999987789995
Q ss_pred CcceEeecc-cCCCCCcceEEEEcCCCCCCCCC--------CeEEEEEEeCHHHHHHHhcCCCCC---CCCCCCCCeEEE
Q psy11868 302 RPYTVSMAN-AGPNTNGSQFFITLTPTPWLDNK--------HTVFGRVTKGMEVVQNISNVKTNH---KTDQPYDDIQVI 369 (374)
Q Consensus 302 r~G~VSman-~gpntngSQFFITl~~~p~LDgk--------~tVFGrVieGmdVL~~Ie~~~td~---~~~kP~~~I~I~ 369 (374)
+|+||||+ .+||+|+||||||+.++||||++ |+|||+|++|||||++|++++++. .+++|.++|+|.
T Consensus 80 -~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~ 158 (164)
T 1lop_A 80 -RGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIE 158 (164)
T ss_dssp -TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEE
T ss_pred -ccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEE
Confidence 79999997 48999999999999999999998 999999999999999999999972 158999999999
Q ss_pred EEEEC
Q psy11868 370 SISVK 374 (374)
Q Consensus 370 ~i~Vk 374 (374)
+|+|.
T Consensus 159 ~~~v~ 163 (164)
T 1lop_A 159 SVTVS 163 (164)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99873
No 34
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=5.1e-45 Score=358.88 Aligned_cols=156 Identities=47% Similarity=0.713 Sum_probs=149.8
Q ss_pred CceeecceEEEeEeceeEEEEec-ccchHHHHHHHhhhcC--------C---ccCCcEEEEEEcCeEEeeCCCC-CCCCC
Q psy11868 215 GEQVLYDSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKN--------N---YYNGHIFHRVIKGFMIQTGDPT-GTGTG 281 (374)
Q Consensus 215 ~~~~~~d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~--------G---yY~gt~FhRVi~~f~IQgGDp~-g~Gtg 281 (374)
.|.+++++.+.+|+.|+|+|+|| +.||+||+||+.||++ | ||+|+.||||+|+|||||||++ |+|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 68899999999999999999999 9999999999999997 6 7999999999999999999998 89999
Q ss_pred CccccCCCCcccccCCCCCCCcceEeecccCCCCCcceEEEEcCCCCCCCCCCeEEEEEEeCHHHHHHHhcCCCCCCCCC
Q psy11868 282 GQSIWGGEFKDEFKSHLKHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRVTKGMEVVQNISNVKTNHKTDQ 361 (374)
Q Consensus 282 G~si~G~~f~dE~~~~LkH~r~G~VSman~gpntngSQFFITl~~~p~LDgk~tVFGrVieGmdVL~~Ie~~~td~~~~k 361 (374)
|+|+||..|+||. ..++|+++|+|||||.|||+||||||||+.++||||++|+|||+|++||+||++|++++++ . ++
T Consensus 95 ~~~~~~~~~~~e~-~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~-~-~~ 171 (370)
T 1ihg_A 95 GESIYGEKFEDEN-FHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVK-G-EK 171 (370)
T ss_dssp CCBTTBSCBCCCC-CCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEE-T-TE
T ss_pred CCCCCCCCcCCCc-CCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCC-C-Cc
Confidence 9999999999996 5799999999999999999999999999999999999999999999999999999999997 4 99
Q ss_pred CCCCeEEEEEEE
Q psy11868 362 PYDDIQVISISV 373 (374)
Q Consensus 362 P~~~I~I~~i~V 373 (374)
|..+|+|.+|.+
T Consensus 172 P~~~v~I~~~g~ 183 (370)
T 1ihg_A 172 PAKLCVIAECGE 183 (370)
T ss_dssp ESSCEEEEEEEE
T ss_pred cceeEEEEEEEE
Confidence 999999999975
No 35
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=4.8e-45 Score=327.57 Aligned_cols=151 Identities=34% Similarity=0.528 Sum_probs=137.5
Q ss_pred ceEEEeEeceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCC
Q psy11868 221 DSAIIHTSMGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLK 299 (374)
Q Consensus 221 d~vi~~Tt~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~Lk 299 (374)
..|+++|++|+|+|+|| +.||+||+||+.||+.|||+|+.||||+|+|||||||+++++ +.+.|+.+|++|+.+.++
T Consensus 5 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--~~~~~g~~~~dE~~~~l~ 82 (166)
T 1v9t_A 5 PHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQM--QQKKPNPPIKNEADNGLR 82 (166)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTC--CBCCCCCCBCCCGGGSCC
T ss_pred eEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCC--CCCCCCCccccccccccc
Confidence 36889999999999999 999999999999999999999999999999999999998654 334578899999877777
Q ss_pred CCCcceEeeccc-CCCCCcceEEEEcCCCCCCCCC-----CeEEEEEEeCHHHHHHHhcCCCCCC---CCCCCCCeEEEE
Q psy11868 300 HDRPYTVSMANA-GPNTNGSQFFITLTPTPWLDNK-----HTVFGRVTKGMEVVQNISNVKTNHK---TDQPYDDIQVIS 370 (374)
Q Consensus 300 H~r~G~VSman~-gpntngSQFFITl~~~p~LDgk-----~tVFGrVieGmdVL~~Ie~~~td~~---~~kP~~~I~I~~ 370 (374)
|. +|+|||||. +||+|+||||||+.++||||++ |+|||+|++|||||++|++++++.. .++|.++|+|.+
T Consensus 83 ~~-~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~ 161 (166)
T 1v9t_A 83 NT-RGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILS 161 (166)
T ss_dssp CC-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEEE
T ss_pred CC-ceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEEE
Confidence 75 699999997 6999999999999999999998 9999999999999999999999721 479999999999
Q ss_pred EEEC
Q psy11868 371 ISVK 374 (374)
Q Consensus 371 i~Vk 374 (374)
|+|.
T Consensus 162 ~~v~ 165 (166)
T 1v9t_A 162 ATVL 165 (166)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9873
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-37 Score=309.93 Aligned_cols=131 Identities=24% Similarity=0.380 Sum_probs=120.1
Q ss_pred eEEEeEe--------ceeEEEEec-ccchHHHHHHHhhhcCCccCCcEEEEEEcCeEEeeCCCCCCCCC-----------
Q psy11868 222 SAIIHTS--------MGDIHLQLF-KECAKTVENFCVHSKNNYYNGHIFHRVIKGFMIQTGDPTGTGTG----------- 281 (374)
Q Consensus 222 ~vi~~Tt--------~G~I~IeLf-d~aPktveNF~~L~k~GyY~gt~FhRVi~~f~IQgGDp~g~Gtg----------- 281 (374)
.+.+.|+ .|+|+|+|| +.||+||+||+.||+.|||+|+.|||| ++||||||||+++|+|
T Consensus 172 ~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g~~~~ 250 (369)
T 3rfy_A 172 SVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTEKTRT 250 (369)
T ss_dssp EEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCCCCCS
T ss_pred EEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccCcCcc
Confidence 4556665 999999999 999999999999999999999999999 9999999999988877
Q ss_pred ----------CccccCCCCcccc----cCCCCCCCcceEeeccc--CCCCCcceEEEEc-------CCCCCCCCCCeEEE
Q psy11868 282 ----------GQSIWGGEFKDEF----KSHLKHDRPYTVSMANA--GPNTNGSQFFITL-------TPTPWLDNKHTVFG 338 (374)
Q Consensus 282 ----------G~si~G~~f~dE~----~~~LkH~r~G~VSman~--gpntngSQFFITl-------~~~p~LDgk~tVFG 338 (374)
+.++|+..|++|. .+.++|+++|+|||||+ +||+||||||||+ .++||||++|+|||
T Consensus 251 iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG 330 (369)
T 3rfy_A 251 VPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFG 330 (369)
T ss_dssp SSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEE
T ss_pred cCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEE
Confidence 5788999998873 45789999999999998 8999999999999 57899999999999
Q ss_pred EEEeCHHHHHHHhcC
Q psy11868 339 RVTKGMEVVQNISNV 353 (374)
Q Consensus 339 rVieGmdVL~~Ie~~ 353 (374)
+|++|||||++|++.
T Consensus 331 ~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 331 YVTDNEDFLADLKVG 345 (369)
T ss_dssp EEEESTTGGGGCCTT
T ss_pred EEecCHHHHHHHhCC
Confidence 999999999999864
No 37
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.46 E-value=0.039 Score=49.96 Aligned_cols=74 Identities=18% Similarity=0.264 Sum_probs=55.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
++|.+..++ +-+.|+.|+|||..+|+..+.+.+. .......+.|+.
T Consensus 157 ~~~~~~~l~--~~~~d~~i~~wd~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~ 202 (312)
T 4ery_A 157 FNRDGSLIV--SSSYDGLCRIWDTASGQCLKTLIDD--------------------------------DNPPVSFVKFSP 202 (312)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTCCEEEEECCS--------------------------------SCCCEEEEEECT
T ss_pred EcCCCCEEE--EEeCCCcEEEEECCCCceeeEEecc--------------------------------CCCceEEEEECC
Confidence 556666676 6678999999999999988765320 001223578999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+|++|+.++.=| |++.|+.++++++.+.
T Consensus 203 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 203 NGKYILAATLDNTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEE
Confidence 999999988655 8899998888877653
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.15 E-value=0.065 Score=50.16 Aligned_cols=128 Identities=15% Similarity=0.173 Sum_probs=82.3
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +.+.|+.|+|||..+|+..+.+.. . ...-..+.|..
T Consensus 147 ~~~~~~~l~--s~s~d~~i~iwd~~~~~~~~~~~~--------------------------------h-~~~v~~~~~~~ 191 (420)
T 3vl1_A 147 FFPSGEALI--SSSQDMQLKIWSVKDGSNPRTLIG--------------------------------H-RATVTDIAIID 191 (420)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTCCCCEEEEC--------------------------------C-SSCEEEEEEET
T ss_pred ECCCCCEEE--EEeCCCeEEEEeCCCCcCceEEcC--------------------------------C-CCcEEEEEEcC
Confidence 566666676 667899999999999987766532 0 11224678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEecCCCc--cccchhhcccccccccccccchhhhhccCCccc-ccCCCceEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIGKPEN--LRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLE-AIQPDPTLFCT 170 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~e~--~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~-~~~~dp~l~~t 170 (374)
+|++|+.++.=| |++.|+.++++++.+-.... .....++++.+.... .. .....+... .-.+|..++++
T Consensus 192 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~----~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 192 RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ---LH----EISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS---CG----GGCCCCCCTTCSSCTTEEEEE
T ss_pred CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce---ee----ecccCcccceEEcCCCCEEEE
Confidence 999999988877 99999999999998854321 223333443332111 00 001111111 11356777888
Q ss_pred eccCceeEEeecCC
Q psy11868 171 GFNKNRFYLFSRRE 184 (374)
Q Consensus 171 a~~k~rfylfs~~~ 184 (374)
+.....+++|.-+.
T Consensus 265 ~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 265 GHVSGVITVHNVFS 278 (420)
T ss_dssp EETTSCEEEEETTT
T ss_pred EcCCCeEEEEECCC
Confidence 88888899997654
No 39
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.04 E-value=0.026 Score=52.15 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=57.6
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|+.|||||..++++++.+... ..-..+.|..
T Consensus 204 ~sp~g~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~----------------------------------~~v~~~~~sp 247 (319)
T 3frx_A 204 ASPDGTLIA--SAGKDGEIMLWNLAAKKAMYTLSAQ----------------------------------DEVFSLAFSP 247 (319)
T ss_dssp ECTTSSEEE--EEETTCEEEEEETTTTEEEEEEECC----------------------------------SCEEEEEECS
T ss_pred EcCCCCEEE--EEeCCCeEEEEECCCCcEEEEecCC----------------------------------CcEEEEEEcC
Confidence 456677776 7779999999999999998877320 0124678999
Q ss_pred CCceEEEeeeeeeEEEEeeeceeEEEec
Q psy11868 95 SGFIVLYATMLGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t~~gikv~n~~t~~~~~~~g 122 (374)
+|.+|..++--||++.++.++.+++.+.
T Consensus 248 ~~~~la~~~~~~i~v~~~~~~~~~~~~~ 275 (319)
T 3frx_A 248 NRYWLAAATATGIKVFSLDPQYLVDDLR 275 (319)
T ss_dssp SSSEEEEEETTEEEEEEETTEEEEEEEC
T ss_pred CCCEEEEEcCCCcEEEEeCcCeeeeccC
Confidence 9999999999999999998888877653
No 40
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.089 Score=49.84 Aligned_cols=71 Identities=15% Similarity=0.231 Sum_probs=55.3
Q ss_pred ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCc
Q psy11868 18 SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGF 97 (374)
Q Consensus 18 ~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~ 97 (374)
.+..++ +.+.|+.|+|||..++++++++.... ....-..+.|+.+|+
T Consensus 181 ~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------------h~~~v~~~~~s~~~~ 227 (437)
T 3gre_A 181 EKSLLV--ALTNLSRVIIFDIRTLERLQIIENSP-------------------------------RHGAVSSICIDEECC 227 (437)
T ss_dssp SCEEEE--EEETTSEEEEEETTTCCEEEEEECCG-------------------------------GGCCEEEEEECTTSC
T ss_pred CCCEEE--EEeCCCeEEEEeCCCCeeeEEEccCC-------------------------------CCCceEEEEECCCCC
Confidence 355555 66789999999999999998875310 001234678999999
Q ss_pred eEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 98 IVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 98 ~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|+-++.=| |++.|+.++++++.+
T Consensus 228 ~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 228 VLILGTTRGIIDIWDIRFNVLIRSW 252 (437)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCeEEEEEcCCccEEEEE
Confidence 999999888 999999999988876
No 41
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.049 Score=49.22 Aligned_cols=82 Identities=18% Similarity=0.187 Sum_probs=62.9
Q ss_pred cceeeee-eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccC
Q psy11868 8 SGKLTRV-YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLS 86 (374)
Q Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~ 86 (374)
.+.++.+ +.|.+..+| +.+.|+.|+|||..+|+..+.+.. ....
T Consensus 32 ~~~v~~~~~s~~~~~l~--~~~~dg~i~vwd~~~~~~~~~~~~---------------------------------h~~~ 76 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLF--SCSKDSSASVWYSLNGERLGTLDG---------------------------------HTGT 76 (369)
T ss_dssp SSCEEEEEECTTSCEEE--EEESSSCEEEEETTTCCEEEEECC---------------------------------CSSC
T ss_pred eceEEEEEEcCCCCEEE--EEeCCCEEEEEeCCCchhhhhhhh---------------------------------cCCc
Confidence 3445554 678888777 667899999999999999988742 0112
Q ss_pred cceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEecCC
Q psy11868 87 LSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIGKP 124 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~ 124 (374)
-..+.|..+|++|+.++.=| |++.|+.++++++.+...
T Consensus 77 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 115 (369)
T 3zwl_B 77 IWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSP 115 (369)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 34678999999999888766 999999999998887643
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.73 E-value=0.046 Score=51.75 Aligned_cols=81 Identities=20% Similarity=0.283 Sum_probs=57.7
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-|.|+.|||||..+|+.+++|..... . ..........+.|..
T Consensus 257 ~~p~~~~l~--s~s~D~~i~lwd~~~~~~~~~~~~~~~----------~----------------~~~~~~~v~~~~~s~ 308 (380)
T 3iz6_a 257 FFPDGQRFG--TGSDDGTCRLFDMRTGHQLQVYNREPD----------R----------------NDNELPIVTSVAFSI 308 (380)
T ss_dssp ECTTSSEEE--EECSSSCEEEEETTTTEEEEEECCCCS----------S----------------SCCSSCSCSEEEECS
T ss_pred EecCCCeEE--EEcCCCeEEEEECCCCcEEEEeccccc----------c----------------cccccCceEEEEECC
Confidence 567777777 778999999999999999988853110 0 000011134678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
+|++|+-++.=| |++.|+.+++++..++.
T Consensus 309 ~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 338 (380)
T 3iz6_a 309 SGRLLFAGYSNGDCYVWDTLLAEMVLNLGT 338 (380)
T ss_dssp SSSEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCCEEEEEECCCCEEEEECCCCceEEEEec
Confidence 999998876554 78888888887776643
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.71 E-value=0.082 Score=49.43 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=60.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +.+.|+.|||||..+|+..+.+...-. ....+..+.|... -.+.+..........+.|+.
T Consensus 189 ~~~~~~~l~--s~~~d~~v~iwd~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 189 IIDRGRNVL--SASLDGTIRLWECGTGTTIHTFNRKEN-------PHDGVNSIALFVG--TDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp EETTTTEEE--EEETTSCEEEEETTTTEEEEEECBTTB-------TTCCEEEEEEEEC--CCSSCGGGCCCCCCTTCSSC
T ss_pred EcCCCCEEE--EEcCCCcEEEeECCCCceeEEeecCCC-------CCCCccEEEEecC--CcceeeecccCcccceEEcC
Confidence 566677776 677899999999999999999865210 0011111111100 00001111122335678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+.++.=| |++.|+.+++.+..+
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 285 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQL 285 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEc
Confidence 999999988776 899998888766554
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.69 E-value=0.16 Score=45.81 Aligned_cols=72 Identities=18% Similarity=0.348 Sum_probs=53.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +-+.|++|+|||..+|+..+.+... ...-..+.|..
T Consensus 115 ~~~~~~~l~--s~~~d~~i~iwd~~~~~~~~~~~~~---------------------------------~~~v~~~~~~~ 159 (312)
T 4ery_A 115 FNPQSNLIV--SGSFDESVRIWDVKTGKCLKTLPAH---------------------------------SDPVSAVHFNR 159 (312)
T ss_dssp ECSSSSEEE--EEETTSCEEEEETTTCCEEEEECCC---------------------------------SSCEEEEEECT
T ss_pred EcCCCCEEE--EEeCCCcEEEEECCCCEEEEEecCC---------------------------------CCcEEEEEEcC
Confidence 556666766 6778999999999999988776320 01224578999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+-++.=| |++.|+.++++++.+
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 999998887665 788898888877654
No 45
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.53 E-value=0.057 Score=50.17 Aligned_cols=72 Identities=14% Similarity=0.258 Sum_probs=55.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|+.|||||..+|++++++..- ...-..+.|..
T Consensus 172 ~spdg~~la--sg~~dg~i~iwd~~~~~~~~~~~~h---------------------------------~~~v~~l~~sp 216 (321)
T 3ow8_A 172 YSPDGKYLA--SGAIDGIINIFDIATGKLLHTLEGH---------------------------------AMPIRSLTFSP 216 (321)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTTEEEEEECCC---------------------------------SSCCCEEEECT
T ss_pred ECCCCCEEE--EEcCCCeEEEEECCCCcEEEEEccc---------------------------------CCceeEEEEcC
Confidence 456666666 6678999999999999998877420 01234678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+-++.=| |++.|+.++++++.+
T Consensus 217 d~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 217 DSQLLVTASDDGYIKIYDVQHANLAGTL 244 (321)
T ss_dssp TSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence 999999988766 899998888776654
No 46
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.40 E-value=0.18 Score=47.30 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=67.7
Q ss_pred cceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCce
Q psy11868 19 LARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFI 98 (374)
Q Consensus 19 ~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~ 98 (374)
+..++ +-+.|++||+||..+|+..+++.. . ...-..+.|..+|+.
T Consensus 210 g~~l~--sgs~Dg~v~~wd~~~~~~~~~~~~--------------------------------h-~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 210 GNTFV--SGGCDKKAMVWDMRSGQCVQAFET--------------------------------H-ESDVNSVRYYPSGDA 254 (354)
T ss_dssp CCEEE--EEETTSCEEEEETTTCCEEEEECC--------------------------------C-SSCEEEEEECTTSSE
T ss_pred CCEEE--EEeCCCeEEEEECCCCcEEEEecC--------------------------------C-CCCeEEEEEeCCCCE
Confidence 34555 667899999999999999887732 0 011235779999999
Q ss_pred EEEeeeee-eEEEEeeeceeEEEecCCCccccchhhcccccccccccccchhhhhccCCcccccCCCceEEEeeccCcee
Q psy11868 99 VLYATMLG-VKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGFNKNRF 177 (374)
Q Consensus 99 ~~y~t~~g-ikv~n~~t~~~~~~~g~~e~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~~~~~dp~l~~ta~~k~rf 177 (374)
|+-++.=| |++.|+.+++.+.++..... ......+ .-.+|..+++++.....+
T Consensus 255 l~s~s~D~~v~lwd~~~~~~~~~~~~~~~---------------~~~~~~~-----------~~s~~g~~l~~g~~d~~i 308 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRADREVAIYSKESI---------------IFGASSV-----------DFSLSGRLLFAGYNDYTI 308 (354)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCTTC---------------CSCEEEE-----------EECTTSSEEEEEETTSCE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCc---------------ccceeEE-----------EEeCCCCEEEEEECCCcE
Confidence 88887655 78888888777666543211 0001111 012355578888888889
Q ss_pred EEeecC
Q psy11868 178 YLFSRR 183 (374)
Q Consensus 178 ylfs~~ 183 (374)
++|.-+
T Consensus 309 ~vwd~~ 314 (354)
T 2pbi_B 309 NVWDVL 314 (354)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 998653
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.32 E-value=0.2 Score=47.55 Aligned_cols=106 Identities=13% Similarity=0.170 Sum_probs=70.3
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|+.|||||..++++.+++..- ...-..+.|..
T Consensus 131 ~s~dg~~l~--s~~~d~~i~iwd~~~~~~~~~~~~h---------------------------------~~~v~~~~~~p 175 (393)
T 1erj_A 131 FSPDGKFLA--TGAEDRLIRIWDIENRKIVMILQGH---------------------------------EQDIYSLDYFP 175 (393)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTTEEEEEECCC---------------------------------SSCEEEEEECT
T ss_pred ECCCCCEEE--EEcCCCeEEEEECCCCcEEEEEccC---------------------------------CCCEEEEEEcC
Confidence 456666666 6678999999999999998776420 01123567888
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEecCCCccccchhhcccccccccccccchhhhhccCCcccccCCCceEEEeecc
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGFN 173 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~e~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~~~~~dp~l~~ta~~ 173 (374)
+|++|+-++.=| |++.|+.++++...+..... ..++. . ...|..+++++..
T Consensus 176 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~------------------v~~~~----~------~~~~~~~l~~~s~ 227 (393)
T 1erj_A 176 SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG------------------VTTVA----V------SPGDGKYIAAGSL 227 (393)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSC------------------EEEEE----E------CSTTCCEEEEEET
T ss_pred CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCC------------------cEEEE----E------ECCCCCEEEEEcC
Confidence 999998877644 78889988888776532211 11110 0 0125567788877
Q ss_pred CceeEEeecC
Q psy11868 174 KNRFYLFSRR 183 (374)
Q Consensus 174 k~rfylfs~~ 183 (374)
.....+|..+
T Consensus 228 d~~v~iwd~~ 237 (393)
T 1erj_A 228 DRAVRVWDSE 237 (393)
T ss_dssp TSCEEEEETT
T ss_pred CCcEEEEECC
Confidence 7888888643
No 48
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.16 E-value=0.19 Score=47.50 Aligned_cols=73 Identities=11% Similarity=0.003 Sum_probs=50.5
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+.++| +-+.|+.|||||..+|++++++..- ...-..+.|..
T Consensus 135 ~spdg~~l~--sgs~d~~i~iwd~~~~~~~~~~~~h---------------------------------~~~V~~~~~~~ 179 (344)
T 4gqb_B 135 VLSSGTQAV--SGSKDICIKVWDLAQQVVLSSYRAH---------------------------------AAQVTCVAASP 179 (344)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTTEEEEEECCC---------------------------------SSCEEEEEECS
T ss_pred ECCCCCEEE--EEeCCCeEEEEECCCCcEEEEEcCc---------------------------------CCceEEEEecC
Confidence 567777777 6779999999999999999887430 00113466777
Q ss_pred CCceEE-Eeeee-eeEEEEeeeceeEEEec
Q psy11868 95 SGFIVL-YATML-GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~-y~t~~-gikv~n~~t~~~~~~~g 122 (374)
++..++ =++.= -|++.|+.+++.++.+.
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 209 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDTRCPKPASQIG 209 (344)
T ss_dssp SCTTEEEEEETTSCEEEEETTSSSCEEECC
T ss_pred CCCCceeeeccccccccccccccceeeeee
Confidence 775443 33332 27888988888877664
No 49
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.15 E-value=0.088 Score=48.07 Aligned_cols=86 Identities=10% Similarity=0.037 Sum_probs=61.9
Q ss_pred Eeeeecceeeee-eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhccc
Q psy11868 3 VFSFLSGKLTRV-YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEK 81 (374)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~ 81 (374)
.|.--++.++.+ +.|.+..+| +-+.|++|||||..+|+..+.+...-
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~--s~~~dg~v~lWd~~~~~~~~~~~~~~------------------------------ 55 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVL--TTLYSGRVELWNYETQVEVRSIQVTE------------------------------ 55 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEE--EEETTSEEEEEETTTTEEEEEEECCS------------------------------
T ss_pred eecCCCCceEEEEECCCCCEEE--EEcCCCcEEEEECCCCceeEEeeccC------------------------------
Confidence 344445555554 677787777 67789999999999999998774310
Q ss_pred ccccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 82 SEQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 82 ~~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
..-..+.|..+|++|+-++.=| |++.|+.++++++.+-.
T Consensus 56 ---~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 95 (304)
T 2ynn_A 56 ---TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95 (304)
T ss_dssp ---SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ---CcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC
Confidence 1123456888888888887654 89999999988877643
No 50
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.10 E-value=0.092 Score=48.74 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=54.3
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|+.|||||..++++.+++.. . ...-..+.|..
T Consensus 214 ~spd~~~l~--s~s~dg~i~iwd~~~~~~~~~~~~--------------------------------h-~~~v~~~~~sp 258 (321)
T 3ow8_A 214 FSPDSQLLV--TASDDGYIKIYDVQHANLAGTLSG--------------------------------H-ASWVLNVAFCP 258 (321)
T ss_dssp ECTTSCEEE--EECTTSCEEEEETTTCCEEEEECC--------------------------------C-SSCEEEEEECT
T ss_pred EcCCCCEEE--EEcCCCeEEEEECCCcceeEEEcC--------------------------------C-CCceEEEEECC
Confidence 445556665 667899999999999998876521 0 01124678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+-++.=| |++.|+.++++++.+
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 999999887655 899999999988876
No 51
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.02 E-value=0.31 Score=44.80 Aligned_cols=111 Identities=12% Similarity=0.132 Sum_probs=67.7
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.+.+..++ +-|.|++|||||..+|+.++.+..- ...-..+.|+.
T Consensus 73 ~s~dg~~l~--s~s~D~~v~~wd~~~~~~~~~~~~h---------------------------------~~~v~~~~~~~ 117 (319)
T 3frx_A 73 LTADGAYAL--SASWDKTLRLWDVATGETYQRFVGH---------------------------------KSDVMSVDIDK 117 (319)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTTEEEEEEECC---------------------------------SSCEEEEEECT
T ss_pred ECCCCCEEE--EEeCCCEEEEEECCCCCeeEEEccC---------------------------------CCcEEEEEEcC
Confidence 566677776 6778999999999999998876420 01123567899
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEecCCCccccchhhcccccccccccccchhhhhccCCcccccCCCceEEEeecc
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGFN 173 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~e~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~~~~~dp~l~~ta~~ 173 (374)
++++|+-++.=| |++.++....+..+.|....+.-+ ++ .|. .....|..+++++..
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~--~~--------------------~~~-~~~~~~~~~l~s~~~ 174 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQV--RV--------------------VPN-EKADDDSVTIISAGN 174 (319)
T ss_dssp TSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEE--EE--------------------CCC-------CCEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEE--EE--------------------ccC-CCCCCCccEEEEEeC
Confidence 999998887655 788887654444444432211111 00 010 001235566778877
Q ss_pred CceeEEeecC
Q psy11868 174 KNRFYLFSRR 183 (374)
Q Consensus 174 k~rfylfs~~ 183 (374)
.....+|.-+
T Consensus 175 d~~i~~wd~~ 184 (319)
T 3frx_A 175 DKMVKAWNLN 184 (319)
T ss_dssp TSCEEEEETT
T ss_pred CCEEEEEECC
Confidence 7888888653
No 52
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.98 E-value=0.056 Score=48.11 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=50.5
Q ss_pred ecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee
Q psy11868 27 LSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG 106 (374)
Q Consensus 27 ~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g 106 (374)
.+.|++|||||..||++++++.-. .+ ...-..+.|...|++|+-++.=|
T Consensus 41 vg~D~tV~iWd~~tg~~~~~~~~~------------------------------~~-~~~V~~v~~~~~~~~l~sgs~Dg 89 (318)
T 4ggc_A 41 VALDNSVYLWSASSGDILQLLQME------------------------------QP-GEYISSVAWIKEGNYLAVGTSSA 89 (318)
T ss_dssp EEETTEEEEEETTTCCEEEEEECC------------------------------ST-TCCEEEEEECTTSSEEEEEETTS
T ss_pred EEeCCEEEEEECCCCCEEEEEEec------------------------------CC-CCeEEEEEECCCCCEEEEEECCC
Confidence 467999999999999999887420 00 01123578999999999888765
Q ss_pred -eEEEEeeeceeEEEecC
Q psy11868 107 -VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 107 -ikv~n~~t~~~~~~~g~ 123 (374)
|++.|+.++++++.+-.
T Consensus 90 ~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred cEEEeecCCceeEEEecC
Confidence 89999999999887643
No 53
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.95 E-value=0.37 Score=44.63 Aligned_cols=108 Identities=7% Similarity=0.126 Sum_probs=70.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +-+.|+.|||||..+|+..+++.. . ...-..+.|..
T Consensus 192 ~~~~~~~l~--sg~~d~~v~~wd~~~~~~~~~~~~--------------------------------h-~~~v~~v~~~p 236 (340)
T 1got_B 192 LAPDTRLFV--SGACDASAKLWDVREGMCRQTFTG--------------------------------H-ESDINAICFFP 236 (340)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTCSEEEEECC--------------------------------C-SSCEEEEEECT
T ss_pred ECCCCCEEE--EEeCCCcEEEEECCCCeeEEEEcC--------------------------------C-cCCEEEEEEcC
Confidence 345555555 667899999999999999887632 0 01124678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEecCCCccccchhhcccccccccccccchhhhhccCCcccccCCCceEEEeecc
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGFN 173 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~e~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~~~~~dp~l~~ta~~ 173 (374)
+|++|+-++.=| |++.|+.+++.+..+..... .....++ .-.+|-.+++++..
T Consensus 237 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~---------------~~~v~~~-----------~~s~~g~~l~~g~~ 290 (340)
T 1got_B 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNI---------------ICGITSV-----------SFSKSGRLLLAGYD 290 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCTTC---------------CSCEEEE-----------EECTTSSEEEEEET
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc---------------ccceEEE-----------EECCCCCEEEEECC
Confidence 999998887655 88888888877665532210 0001111 01235557888888
Q ss_pred CceeEEeecC
Q psy11868 174 KNRFYLFSRR 183 (374)
Q Consensus 174 k~rfylfs~~ 183 (374)
....++|..+
T Consensus 291 d~~i~vwd~~ 300 (340)
T 1got_B 291 DFNCNVWDAL 300 (340)
T ss_dssp TSEEEEEETT
T ss_pred CCeEEEEEcc
Confidence 8889998653
No 54
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.79 E-value=0.12 Score=47.85 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=53.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|+.|||||+.+++.+..+... .....-..+.|..
T Consensus 234 ~~p~~~~l~--s~s~d~~v~iwd~~~~~~~~~~~~~-------------------------------~~~~~v~~~~~s~ 280 (340)
T 1got_B 234 FFPNGNAFA--TGSDDATCRLFDLRADQELMTYSHD-------------------------------NIICGITSVSFSK 280 (340)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTTEEEEEECCT-------------------------------TCCSCEEEEEECT
T ss_pred EcCCCCEEE--EEcCCCcEEEEECCCCcEEEEEccC-------------------------------CcccceEEEEECC
Confidence 456677776 6779999999999999988766320 0001234678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+-++.=| |++.|+.+++.+..+
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 999999887654 788888777766554
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.79 E-value=0.34 Score=43.62 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=50.8
Q ss_pred eeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC-CCceE
Q psy11868 21 RFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD-SGFIV 99 (374)
Q Consensus 21 ~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~-s~~~~ 99 (374)
.+| +-+.|+.|+|||..+|++++.+.. ....-..+.|.. ++++|
T Consensus 87 ~l~--~~~~dg~i~v~d~~~~~~~~~~~~---------------------------------~~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 87 LLA--VAGSRGIIRIINPITMQCIKHYVG---------------------------------HGNAINELKFHPRDPNLL 131 (366)
T ss_dssp EEE--EEETTCEEEEECTTTCCEEEEEES---------------------------------CCSCEEEEEECSSCTTEE
T ss_pred EEE--EecCCCEEEEEEchhceEeeeecC---------------------------------CCCcEEEEEECCCCCCEE
Confidence 454 667899999999999999887732 001224567888 88988
Q ss_pred EEeeeee-eEEEEeeeceeEEEec
Q psy11868 100 LYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 100 ~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+-++.=| |++.|+.+++.++.+.
T Consensus 132 ~s~~~dg~i~iwd~~~~~~~~~~~ 155 (366)
T 3k26_A 132 LSVSKDHALRLWNIQTDTLVAIFG 155 (366)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEeCCCeEEEEEeecCeEEEEec
Confidence 8887654 8999999998888774
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.75 E-value=0.077 Score=54.48 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=57.7
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +.|.|+.|||||+.+|+.+..+.. . .....+.|..
T Consensus 569 ~spdg~~l~--sg~~Dg~i~iwd~~~~~~~~~~~~--------------------------------~--~~v~~~~~sp 612 (694)
T 3dm0_A 569 VSPDGSLCA--SGGKDGVVLLWDLAEGKKLYSLEA--------------------------------N--SVIHALCFSP 612 (694)
T ss_dssp ECTTSSEEE--EEETTSBCEEEETTTTEEEECCBC--------------------------------S--SCEEEEEECS
T ss_pred EeCCCCEEE--EEeCCCeEEEEECCCCceEEEecC--------------------------------C--CcEEEEEEcC
Confidence 456666666 777999999999999998765421 0 1124678999
Q ss_pred CCceEEEeeeeeeEEEEeeeceeEEEecC
Q psy11868 95 SGFIVLYATMLGVKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 95 s~~~~~y~t~~gikv~n~~t~~~~~~~g~ 123 (374)
++.+|.-++--||++.|+.++++++.+..
T Consensus 613 ~~~~l~~~~~~~i~iwd~~~~~~~~~~~~ 641 (694)
T 3dm0_A 613 NRYWLCAATEHGIKIWDLESKSIVEDLKV 641 (694)
T ss_dssp SSSEEEEEETTEEEEEETTTTEEEEEECC
T ss_pred CCcEEEEEcCCCEEEEECCCCCChhhhcc
Confidence 99999999999999999999999987743
No 57
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.75 E-value=0.56 Score=44.05 Aligned_cols=74 Identities=8% Similarity=0.058 Sum_probs=53.7
Q ss_pred ecccc-ceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDESL-ARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~~-~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|.+ ..++ +.+.|+.|+|||..+|+..+.+... .....-..+.|.
T Consensus 139 ~~p~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~-------------------------------~~~~~v~~~~~~ 185 (402)
T 2aq5_A 139 WHPTAQNVLL--SAGCDNVILVWDVGTGAAVLTLGPD-------------------------------VHPDTIYSVDWS 185 (402)
T ss_dssp ECSSBTTEEE--EEETTSCEEEEETTTTEEEEEECTT-------------------------------TCCSCEEEEEEC
T ss_pred ECcCCCCEEE--EEcCCCEEEEEECCCCCccEEEecC-------------------------------CCCCceEEEEEC
Confidence 44555 3454 6678999999999999998877300 001123467899
Q ss_pred CCCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 94 DSGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
.+|++|+.++.=| |++.|+.++++++.+
T Consensus 186 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 186 RDGALICTSCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp TTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence 9999999887655 889999888887776
No 58
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.72 E-value=0.058 Score=51.82 Aligned_cols=72 Identities=19% Similarity=0.250 Sum_probs=53.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+++++..+| +-|.|++|||||+.++++++++.. . ...-..+.|..
T Consensus 158 ~~~~~~~l~--sgs~D~~i~iwd~~~~~~~~~~~~--------------------------------h-~~~V~~v~~~p 202 (410)
T 1vyh_C 158 FDHSGKLLA--SCSADMTIKLWDFQGFECIRTMHG--------------------------------H-DHNVSSVSIMP 202 (410)
T ss_dssp ECTTSSEEE--EEETTSCCCEEETTSSCEEECCCC--------------------------------C-SSCEEEEEECS
T ss_pred EcCCCCEEE--EEeCCCeEEEEeCCCCceeEEEcC--------------------------------C-CCCEEEEEEeC
Confidence 456677776 677999999999999998876632 0 01124577999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+-++.=| |++.|+.++++++.+
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 999988776544 888999998887765
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.63 E-value=0.16 Score=45.26 Aligned_cols=70 Identities=9% Similarity=0.064 Sum_probs=51.2
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
++|.+..++ +.+.|+.|++||..+++..+.+.- ......+.|..
T Consensus 191 ~~~~~~~l~--~~~~dg~i~~~d~~~~~~~~~~~~----------------------------------~~~v~~~~~s~ 234 (337)
T 1gxr_A 191 ISNDGTKLW--TGGLDNTVRSWDLREGRQLQQHDF----------------------------------TSQIFSLGYCP 234 (337)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTTEEEEEEEC----------------------------------SSCEEEEEECT
T ss_pred ECCCCCEEE--EEecCCcEEEEECCCCceEeeecC----------------------------------CCceEEEEECC
Confidence 556666666 666899999999999998876531 01234678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEE
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRF 120 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~ 120 (374)
+|++|+.++.=| |++.|+.+++..++
T Consensus 235 ~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 235 TGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp TSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 999999887644 78888877765544
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.41 E-value=0.45 Score=42.26 Aligned_cols=72 Identities=8% Similarity=0.062 Sum_probs=53.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +.+.|+.|++||..++++.+.+.. .......+.|+.
T Consensus 149 ~~~~~~~l~--~~~~dg~v~~~d~~~~~~~~~~~~---------------------------------~~~~i~~~~~~~ 193 (337)
T 1gxr_A 149 ISPDSKVCF--SCCSDGNIAVWDLHNQTLVRQFQG---------------------------------HTDGASCIDISN 193 (337)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTTEEEEEECC---------------------------------CSSCEEEEEECT
T ss_pred ECCCCCEEE--EEeCCCcEEEEeCCCCceeeeeec---------------------------------ccCceEEEEECC
Confidence 556666666 666899999999999999887642 001234678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+.++.-| |++.|+.+++.++.+
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 221 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQLQQH 221 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEecCCcEEEEECCCCceEeee
Confidence 999998887554 788888888877665
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.35 E-value=0.13 Score=46.29 Aligned_cols=71 Identities=8% Similarity=0.150 Sum_probs=52.6
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
++|.+..++ +.+.|+.|+|||..++++.+.+... .....+.|+.
T Consensus 226 ~~~~~~~l~--~~~~d~~i~v~d~~~~~~~~~~~~~----------------------------------~~~~~~~~~~ 269 (369)
T 3zwl_B 226 FSPDLTYFI--TSSRDTNSFLVDVSTLQVLKKYETD----------------------------------CPLNTAVITP 269 (369)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTCCEEEEEECS----------------------------------SCEEEEEECS
T ss_pred ECCCCCEEE--EecCCceEEEEECCCCceeeeecCC----------------------------------CCceeEEecC
Confidence 566666676 6678999999999999999887520 1235788999
Q ss_pred CCceEEEeeeee---------------eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG---------------VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g---------------ikv~n~~t~~~~~~~ 121 (374)
+|+++++++.-| |++.|+.+++.+..+
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 311 (369)
T 3zwl_B 270 LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV 311 (369)
T ss_dssp SSSEEEEEECCC-------------CEEEEEETTTCCEEEEE
T ss_pred CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe
Confidence 999999998765 566666666655544
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.29 E-value=0.25 Score=44.94 Aligned_cols=84 Identities=10% Similarity=0.063 Sum_probs=62.0
Q ss_pred eEeeeecceeeee-eccccceeeeeeecCCCCEEEEEeCCce--EEEEeechhHHHHHHHHhccCCCccchhhhhhhhhh
Q psy11868 2 RVFSFLSGKLTRV-YDESLARFAELKLSETEPVRVFSFLSGK--LTRVYDESLARFADLQKAKQQLPNMEFGRRMATERD 78 (374)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tgk--l~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e 78 (374)
.++.+-.+.++.+ +.|.+..+| +.+.|+.|+|||..+++ +.+.+...
T Consensus 2 ~~~~~~~~~i~~~~~s~~~~~l~--~~~~d~~v~i~~~~~~~~~~~~~~~~h---------------------------- 51 (372)
T 1k8k_C 2 AYHSFLVEPISCHAWNKDRTQIA--ICPNNHEVHIYEKSGNKWVQVHELKEH---------------------------- 51 (372)
T ss_dssp CEEESCSSCCCEEEECTTSSEEE--EECSSSEEEEEEEETTEEEEEEEEECC----------------------------
T ss_pred ceecccCCCeEEEEECCCCCEEE--EEeCCCEEEEEeCCCCcEEeeeeecCC----------------------------
Confidence 4566666777654 688888887 56689999999999998 66666420
Q ss_pred cccccccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEE
Q psy11868 79 LEKSEQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRF 120 (374)
Q Consensus 79 ~~~~~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~ 120 (374)
...-..+.|..+|++|+.++.=| |++.|+.++++...
T Consensus 52 -----~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 52 -----NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp -----SSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred -----CCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 01234678999999999888655 89999999885554
No 63
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.27 E-value=0.19 Score=46.60 Aligned_cols=89 Identities=12% Similarity=0.133 Sum_probs=61.3
Q ss_pred eEeeeecceeeee-----------eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchh
Q psy11868 2 RVFSFLSGKLTRV-----------YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFG 70 (374)
Q Consensus 2 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~ 70 (374)
++|..-.|++.+. ++|.+...+ ++-+.|++|++||..+|++.+.+.-
T Consensus 15 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~d~~i~v~d~~~~~~~~~~~~--------------------- 72 (391)
T 1l0q_A 15 SVIDVTSNKVTATIPVGSNPMGAVISPDGTKVY-VANAHSNDVSIIDTATNNVIATVPA--------------------- 72 (391)
T ss_dssp EEEETTTTEEEEEEECSSSEEEEEECTTSSEEE-EEEGGGTEEEEEETTTTEEEEEEEC---------------------
T ss_pred EEEECCCCeEEEEeecCCCcceEEECCCCCEEE-EECCCCCeEEEEECCCCeEEEEEEC---------------------
Confidence 4555555555443 445555443 2444799999999999999887642
Q ss_pred hhhhhhhhcccccccCcceEEEcCCCceEEEeee--eeeEEEEeeeceeEEEecCCC
Q psy11868 71 RRMATERDLEKSEQLSLSNVLFDDSGFIVLYATM--LGVKFVNIVTNQCVRFIGKPE 125 (374)
Q Consensus 71 rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~--~gikv~n~~t~~~~~~~g~~e 125 (374)
. .....+.|+.+|++|++... -.|+++|+.++++++.+....
T Consensus 73 -----------~--~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 116 (391)
T 1l0q_A 73 -----------G--SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK 116 (391)
T ss_dssp -----------S--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred -----------C--CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC
Confidence 0 02246779999998887654 369999999999998886544
No 64
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.20 E-value=0.13 Score=48.66 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=54.6
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+...|+|+-+.|+.|||||..+|+....+.- +. .-..+.|..
T Consensus 141 fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~--------------------------~~--------~V~~v~fsp 186 (365)
T 4h5i_A 141 ISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET--------------------------RG--------EVKDLHFST 186 (365)
T ss_dssp ECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC--------------------------SS--------CCCEEEECT
T ss_pred EcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC--------------------------CC--------ceEEEEEcc
Confidence 45667777766555799999999999999877632 01 123578999
Q ss_pred CCceEEEeeeeeeEEEEeeeceeEE
Q psy11868 95 SGFIVLYATMLGVKFVNIVTNQCVR 119 (374)
Q Consensus 95 s~~~~~y~t~~gikv~n~~t~~~~~ 119 (374)
+|++|++++-=++.+++..+++.+.
T Consensus 187 dg~~l~s~s~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 187 DGKVVAYITGSSLEVISTVTGSCIA 211 (365)
T ss_dssp TSSEEEEECSSCEEEEETTTCCEEE
T ss_pred CCceEEeccceeEEEEEeccCccee
Confidence 9999999998889999988887654
No 65
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.13 E-value=0.68 Score=41.37 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=52.1
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|+.|||||+.+++.++.++-. .....+.|..
T Consensus 223 ~s~~~~~l~--s~s~Dg~i~iwd~~~~~~~~~~~~~----------------------------------~~v~~~~~~~ 266 (340)
T 4aow_A 223 VSPDGSLCA--SGGKDGQAMLWDLNEGKHLYTLDGG----------------------------------DIINALCFSP 266 (340)
T ss_dssp ECTTSSEEE--EEETTCEEEEEETTTTEEEEEEECS----------------------------------SCEEEEEECS
T ss_pred ECCCCCEEE--EEeCCCeEEEEEeccCceeeeecCC----------------------------------ceEEeeecCC
Confidence 566777776 6678999999999999998877431 0123566777
Q ss_pred CCceEEEeeeeeeEEEEeeeceeEEEec
Q psy11868 95 SGFIVLYATMLGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t~~gikv~n~~t~~~~~~~g 122 (374)
++.++.-++==-|++.|+.++.++..+.
T Consensus 267 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 294 (340)
T 4aow_A 267 NRYWLCAATGPSIKIWDLEGKIIVDELK 294 (340)
T ss_dssp SSSEEEEEETTEEEEEETTTTEEEEEEC
T ss_pred CCceeeccCCCEEEEEECCCCeEEEecc
Confidence 7777766655568888888887776653
No 66
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.11 E-value=0.18 Score=47.77 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=52.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +.+.|++|||||..+|+....+.-. .....+.|..
T Consensus 173 ~~p~~~~l~--s~s~d~~v~iwd~~~~~~~~~~~~~----------------------------------~~v~~~~~~~ 216 (393)
T 1erj_A 173 YFPSGDKLV--SGSGDRTVRIWDLRTGQCSLTLSIE----------------------------------DGVTTVAVSP 216 (393)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTTEEEEEEECS----------------------------------SCEEEEEECS
T ss_pred EcCCCCEEE--EecCCCcEEEEECCCCeeEEEEEcC----------------------------------CCcEEEEEEC
Confidence 345666666 6778999999999999988766310 0123556776
Q ss_pred -CCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 95 -SGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 -s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+|++|+-++.=| |++.|+.++++++.+.
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~ 246 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLD 246 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeec
Confidence 788888887655 7888988888877653
No 67
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.08 E-value=0.26 Score=46.27 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=53.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|++..+| +-+.|+.|||||+.+++....+... . .......+.|..
T Consensus 248 ~~p~~~~l~--s~s~D~~v~lwd~~~~~~~~~~~~~---------------~----------------~~~~~~~~~~s~ 294 (354)
T 2pbi_B 248 YYPSGDAFA--SGSDDATCRLYDLRADREVAIYSKE---------------S----------------IIFGASSVDFSL 294 (354)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTTEEEEEECCT---------------T----------------CCSCEEEEEECT
T ss_pred EeCCCCEEE--EEeCCCeEEEEECCCCcEEEEEcCC---------------C----------------cccceeEEEEeC
Confidence 567777777 7779999999999999877666320 0 001224678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+|++|+-++.=| |++.|+.+++.+..+
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLKGSRVSIL 322 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred CCCEEEEEECCCcEEEEECCCCceEEEE
Confidence 999998876543 888888887766554
No 68
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.01 E-value=0.14 Score=48.47 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=54.0
Q ss_pred CeEeeeecceeeeeec------------cccc-eeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCcc
Q psy11868 1 VRVFSFLSGKLTRVYD------------ESLA-RFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNM 67 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~ 67 (374)
||+|..-+|++.+.+. +.+. .++ +.+.|++|||||..+|+..+.+....
T Consensus 151 i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~--s~s~D~~v~iwd~~~~~~~~~~~~~~---------------- 212 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFL--SCSEDNRILLWDTRCPKPASQIGCSA---------------- 212 (344)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEE--EEETTSCEEEEETTSSSCEEECC-------------------
T ss_pred EEEEECCCCcEEEEEcCcCCceEEEEecCCCCCcee--eeccccccccccccccceeeeeecce----------------
Confidence 3556555555544432 3333 344 66789999999999999887663210
Q ss_pred chhhhhhhhhhcccccccCcceEEEcC-CCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 68 EFGRRMATERDLEKSEQLSLSNVLFDD-SGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 68 ~f~rr~a~e~e~~~~~~~~~~~~~fd~-s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
.......+.|.. .+++|+-++.=| |++.|+.++++++.+
T Consensus 213 ---------------~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~ 253 (344)
T 4gqb_B 213 ---------------PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS 253 (344)
T ss_dssp ----------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE
T ss_pred ---------------eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE
Confidence 001123466775 456777776655 899999998887765
No 69
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.93 E-value=0.21 Score=44.97 Aligned_cols=72 Identities=7% Similarity=0.137 Sum_probs=53.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE--
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF-- 92 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f-- 92 (374)
+.|.+..++ +.+.|+.|+|||..++++.+.... ...-..+.|
T Consensus 94 ~~~~~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~----------------------------------~~~v~~~~~~~ 137 (368)
T 3mmy_A 94 WSDDGSKVF--TASCDKTAKMWDLSSNQAIQIAQH----------------------------------DAPVKTIHWIK 137 (368)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTTEEEEEEEC----------------------------------SSCEEEEEEEE
T ss_pred ECcCCCEEE--EEcCCCcEEEEEcCCCCceeeccc----------------------------------cCceEEEEEEe
Confidence 567777777 677899999999999998865411 012235667
Q ss_pred cCCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 93 DDSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 93 d~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+.+|++|+.++.=| |++.|+.++++++.+-
T Consensus 138 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 138 APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp CSSCEEEEEEETTSEEEEECSSCSSCSEEEE
T ss_pred CCCCCEEEEccCCCcEEEEECCCCcEEEEEe
Confidence 88999998887655 8888888887766653
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.89 E-value=0.66 Score=43.57 Aligned_cols=69 Identities=16% Similarity=0.131 Sum_probs=47.6
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +.+.|++|||||..+|+..+.+... ........+.|..
T Consensus 184 ~~~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~ 230 (402)
T 2aq5_A 184 WSRDGALIC--TSCRDKRVRVIEPRKGTVVAEKDRP-------------------------------HEGTRPVHAVFVS 230 (402)
T ss_dssp ECTTSSCEE--EEETTSEEEEEETTTTEEEEEEECS-------------------------------SCSSSCCEEEECS
T ss_pred ECCCCCEEE--EEecCCcEEEEeCCCCceeeeeccC-------------------------------CCCCcceEEEEcC
Confidence 455666676 6778999999999999998777320 1111235688999
Q ss_pred CCceEEEe----eeeeeEEEEeeece
Q psy11868 95 SGFIVLYA----TMLGVKFVNIVTNQ 116 (374)
Q Consensus 95 s~~~~~y~----t~~gikv~n~~t~~ 116 (374)
+|++|+.+ .---|++.|+.+++
T Consensus 231 ~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 231 EGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp TTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CCcEEEEeccCCCCceEEEEcCcccc
Confidence 99988876 23346777766544
No 71
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.81 E-value=0.15 Score=47.13 Aligned_cols=70 Identities=9% Similarity=0.085 Sum_probs=50.6
Q ss_pred ecc--ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE
Q psy11868 15 YDE--SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF 92 (374)
Q Consensus 15 ~~~--~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f 92 (374)
+.| .+..++ +.+.|+.|||||+.+|+.++.+... .......+.|
T Consensus 133 ~~~~~~~~~l~--s~s~dg~i~~wd~~~~~~~~~~~~~--------------------------------~~~~i~~~~~ 178 (343)
T 3lrv_A 133 GHNEVNTEYFI--WADNRGTIGFQSYEDDSQYIVHSAK--------------------------------SDVEYSSGVL 178 (343)
T ss_dssp CCC---CCEEE--EEETTCCEEEEESSSSCEEEEECCC--------------------------------SSCCCCEEEE
T ss_pred cCCCCCCCEEE--EEeCCCcEEEEECCCCcEEEEEecC--------------------------------CCCceEEEEE
Confidence 456 667776 6779999999999999998766321 0112346789
Q ss_pred cCCCceEEEeeeee-eEEEEeeeceeE
Q psy11868 93 DDSGFIVLYATMLG-VKFVNIVTNQCV 118 (374)
Q Consensus 93 d~s~~~~~y~t~~g-ikv~n~~t~~~~ 118 (374)
..+|++|+-++.=| |++.|+.+++++
T Consensus 179 ~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 179 HKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp CTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 99999998876544 788888877665
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.75 E-value=0.6 Score=43.77 Aligned_cols=93 Identities=11% Similarity=0.067 Sum_probs=58.5
Q ss_pred eccccceeeeeeecCCCCEEEEEeCC-ceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLS-GKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~t-gkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|.+..++ +.+. +.|+|||..+ ++.++++..--.... .+...-+.........+.|.
T Consensus 293 ~s~~g~~l~--~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~------------------~l~~~~~~~~i~~~~~~~~s 351 (447)
T 3dw8_B 293 FSHSGRYMM--TRDY-LSVKVWDLNMENRPVETYQVHEYLRS------------------KLCSLYENDCIFDKFECCWN 351 (447)
T ss_dssp ECTTSSEEE--EEES-SEEEEEETTCCSSCSCCEESCGGGTT------------------THHHHHHTSGGGCCCCEEEC
T ss_pred ECCCCCEEE--EeeC-CeEEEEeCCCCccccceeeccccccc------------------cccccccccccccceEEEEC
Confidence 456666665 4444 9999999998 887777654210000 00000011111122358999
Q ss_pred CCCceEEEeeeee-eEEEEeeeceeEEEecCCCccc
Q psy11868 94 DSGFIVLYATMLG-VKFVNIVTNQCVRFIGKPENLR 128 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~e~~r 128 (374)
.+|++|+-++.=| |++.|+.+++++.+.+..+..|
T Consensus 352 ~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~ 387 (447)
T 3dw8_B 352 GSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNK 387 (447)
T ss_dssp TTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCC
T ss_pred CCCCEEEEeccCCEEEEEEcCCCcceeeeecccccc
Confidence 9999998877654 8999999999998887765444
No 73
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.68 E-value=0.17 Score=48.49 Aligned_cols=64 Identities=13% Similarity=0.238 Sum_probs=48.7
Q ss_pred eecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee
Q psy11868 26 KLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML 105 (374)
Q Consensus 26 ~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~ 105 (374)
+-|.|+.|||||..+|++++++.. .. ..-..+.|+.+|++|+-++.=
T Consensus 313 sgs~D~~i~iwd~~~~~~~~~~~~--------------------------------h~-~~v~~v~~~~~g~~l~s~s~D 359 (410)
T 1vyh_C 313 SGSRDKTIKMWDVSTGMCLMTLVG--------------------------------HD-NWVRGVLFHSGGKFILSCADD 359 (410)
T ss_dssp EEETTSEEEEEETTTTEEEEEEEC--------------------------------CS-SCEEEEEECSSSSCEEEEETT
T ss_pred EEeCCCeEEEEECCCCceEEEEEC--------------------------------CC-CcEEEEEEcCCCCEEEEEeCC
Confidence 667899999999999999887733 00 112357899999999988765
Q ss_pred e-eEEEEeeeceeEEEec
Q psy11868 106 G-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 106 g-ikv~n~~t~~~~~~~g 122 (374)
| |++.|+.++++++.+.
T Consensus 360 ~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 360 KTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp TEEEEECCTTSCCCEEEE
T ss_pred CeEEEEECCCCceEEEEc
Confidence 5 8888888887776653
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.59 E-value=0.48 Score=43.50 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=45.2
Q ss_pred eecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee
Q psy11868 26 KLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML 105 (374)
Q Consensus 26 ~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~ 105 (374)
+.+.|+.|+|||+.+++++..+... ......+.|..+|++|+.++.=
T Consensus 305 ~~~~d~~i~i~d~~~~~~~~~~~~~---------------------------------~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 305 SCSMDGSVRLWSLKQNTLLALSIVD---------------------------------GVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECT---------------------------------TCCEEEEEECTTSSEEEEEETT
T ss_pred EEeCCCcEEEEECCCCcEeEecccC---------------------------------CccEEEEEEcCCCCEEEEEECC
Confidence 6678999999999999998877430 0123467899999999988866
Q ss_pred e-eEEEEeeece
Q psy11868 106 G-VKFVNIVTNQ 116 (374)
Q Consensus 106 g-ikv~n~~t~~ 116 (374)
| |++.++.+++
T Consensus 352 g~i~i~~~~~~~ 363 (425)
T 1r5m_A 352 GQVNVYDLKKLN 363 (425)
T ss_dssp SCEEEEECHHHH
T ss_pred CeEEEEECCCCc
Confidence 5 7888887766
No 75
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=93.55 E-value=0.25 Score=48.87 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=44.4
Q ss_pred eeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeee
Q psy11868 25 LKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATM 104 (374)
Q Consensus 25 ~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~ 104 (374)
|+-|.|+.|||||..|||+++++..- .........+.|-.+|.+++-.+-
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~tL~g~------------------------------~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLKKMHID------------------------------DSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECC------------------------------C---CCCEEEEEEETTEEEEEEC-
T ss_pred EEecCCCcEEEEECCCCcEEEEEcCC------------------------------CcceeeeEEEEECCCCCEEEEecc
Confidence 35668999999999999999998530 000012223467778887764331
Q ss_pred -------------eeeEEEEeeeceeEEEe
Q psy11868 105 -------------LGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 105 -------------~gikv~n~~t~~~~~~~ 121 (374)
-=||+.|..|+++++++
T Consensus 247 ~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 247 PCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp -----------CCEEEEEEETTTTEEEEEE
T ss_pred CCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 12677888888887765
No 76
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=93.46 E-value=0.32 Score=45.65 Aligned_cols=68 Identities=15% Similarity=0.230 Sum_probs=51.1
Q ss_pred eccccceeeeeeecCCCC-EEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDESLARFAELKLSETEP-VRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~-ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|.+..+| +-|.|++ |||||..+|++++++... .....-..+.|.
T Consensus 203 ~s~~g~~l~--s~s~d~~~v~iwd~~~~~~~~~~~~g-------------------------------~h~~~v~~~~~s 249 (355)
T 3vu4_A 203 LNRKSDMVA--TCSQDGTIIRVFKTEDGVLVREFRRG-------------------------------LDRADVVDMKWS 249 (355)
T ss_dssp ECTTSSEEE--EEETTCSEEEEEETTTCCEEEEEECT-------------------------------TCCSCEEEEEEC
T ss_pred ECCCCCEEE--EEeCCCCEEEEEECCCCcEEEEEEcC-------------------------------CCCCcEEEEEEC
Confidence 677777787 7789999 999999999999887421 001123467899
Q ss_pred CCCceEEEeeeee-eEEEEeeec
Q psy11868 94 DSGFIVLYATMLG-VKFVNIVTN 115 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~t~ 115 (374)
.+|++|+-++.=| |++.|+.++
T Consensus 250 ~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 250 TDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEECCCEEEEEEccCC
Confidence 9999999988644 778887665
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.22 E-value=0.18 Score=47.68 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=57.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
++.++..++ +.+.|+.|+|||..+|++.+.+... ....-..+.|..
T Consensus 99 ~~~s~~~l~--~~~~d~~v~lw~~~~~~~~~~~~~~--------------------------------~~~~v~~v~~s~ 144 (401)
T 4aez_A 99 LDWSNLNVV--AVALERNVYVWNADSGSVSALAETD--------------------------------ESTYVASVKWSH 144 (401)
T ss_dssp EEECTTSEE--EEEETTEEEEEETTTCCEEEEEECC--------------------------------TTCCEEEEEECT
T ss_pred EeecCCCEE--EEECCCeEEEeeCCCCcEeEeeecC--------------------------------CCCCEEEEEECC
Confidence 566677666 6779999999999999998876431 011234678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+|++|+.++.=| |++.|+.++++++.+-
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 999999988766 8999999999888874
No 78
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.12 E-value=0.48 Score=44.43 Aligned_cols=72 Identities=8% Similarity=0.069 Sum_probs=51.7
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
++|.+.... ++-+.|++|++||..+|++.+.+... .....+.|+.
T Consensus 310 ~~~~g~~l~-~~~~~~~~v~v~d~~~~~~~~~~~~~----------------------------------~~~~~~~~s~ 354 (433)
T 3bws_A 310 SGNTENKIY-VSDMCCSKIEVYDLKEKKVQKSIPVF----------------------------------DKPNTIALSP 354 (433)
T ss_dssp ECSSTTEEE-EEETTTTEEEEEETTTTEEEEEEECS----------------------------------SSEEEEEECT
T ss_pred ECCCCCEEE-EEecCCCEEEEEECCCCcEEEEecCC----------------------------------CCCCeEEEcC
Confidence 344444433 34468999999999999998776320 1123678999
Q ss_pred CCceEEEeeee----------------eeEEEEeeeceeEEEe
Q psy11868 95 SGFIVLYATML----------------GVKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s~~~~~y~t~~----------------gikv~n~~t~~~~~~~ 121 (374)
+|++|+.++.- .|.++|+.+++++..+
T Consensus 355 dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 355 DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 99988877754 5899999898887765
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.11 E-value=0.37 Score=45.21 Aligned_cols=85 Identities=21% Similarity=0.308 Sum_probs=55.0
Q ss_pred eecccc-ceeeeeeecCCCCEEEEEeCCceE----EEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcc
Q psy11868 14 VYDESL-ARFAELKLSETEPVRVFSFLSGKL----TRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLS 88 (374)
Q Consensus 14 ~~~~~~-~~~~~~~~~~d~~ir~f~~~tgkl----~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~ 88 (374)
.++|.+ ..+| +-+.|+.|||||..++++ .+++...-.. ....+ +. .....-.
T Consensus 233 ~~~p~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~~~---------~~-~~~~~v~ 289 (447)
T 3dw8_B 233 EFHPNSCNTFV--YSSSKGTIRLCDMRASALCDRHSKLFEEPEDP-----------SNRSF---------FS-EIISSIS 289 (447)
T ss_dssp EECSSCTTEEE--EEETTSCEEEEETTTCSSSCTTCEEECCC----------------CCH---------HH-HHTTCEE
T ss_pred EECCCCCcEEE--EEeCCCeEEEEECcCCccccceeeEeccCCCc-----------ccccc---------cc-ccCceEE
Confidence 356666 5666 677899999999999997 6676553210 00000 00 0011335
Q ss_pred eEEEcCCCceEEEeeeeeeEEEEeee-ceeEEEe
Q psy11868 89 NVLFDDSGFIVLYATMLGVKFVNIVT-NQCVRFI 121 (374)
Q Consensus 89 ~~~fd~s~~~~~y~t~~gikv~n~~t-~~~~~~~ 121 (374)
.+.|..+|++|+-++.--|++.|+.+ +++++.+
T Consensus 290 ~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 290 DVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETY 323 (447)
T ss_dssp EEEECTTSSEEEEEESSEEEEEETTCCSSCSCCE
T ss_pred EEEECCCCCEEEEeeCCeEEEEeCCCCcccccee
Confidence 78899999999988886688888876 6655554
No 80
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.09 E-value=0.16 Score=48.11 Aligned_cols=76 Identities=13% Similarity=0.195 Sum_probs=54.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceE----
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNV---- 90 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~---- 90 (374)
++|.+..++ +-+.|+.|||||..+|++++.+.-. . . ..-..+
T Consensus 222 ~s~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~----------~--------------------~--~~v~~~~~~~ 267 (437)
T 3gre_A 222 IDEECCVLI--LGTTRGIIDIWDIRFNVLIRSWSFG----------D--------------------H--APITHVEVCQ 267 (437)
T ss_dssp ECTTSCEEE--EEETTSCEEEEETTTTEEEEEEBCT----------T--------------------C--EEEEEEEECT
T ss_pred ECCCCCEEE--EEcCCCeEEEEEcCCccEEEEEecC----------C--------------------C--CceEEEEecc
Confidence 566666666 6778999999999999999877310 0 0 011123
Q ss_pred EEcCCCceEEEeeeee-eEEEEeeeceeEEEecCC
Q psy11868 91 LFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIGKP 124 (374)
Q Consensus 91 ~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~ 124 (374)
.|..+|++|+-++.=| |++.|+.++++++.+-..
T Consensus 268 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 302 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINS 302 (437)
T ss_dssp TTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESS
T ss_pred ccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcC
Confidence 3556688888888777 999999999999887643
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.95 E-value=0.21 Score=47.68 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=51.0
Q ss_pred ecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee
Q psy11868 27 LSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG 106 (374)
Q Consensus 27 ~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g 106 (374)
++.|+.|||||..||++.+.++-. .. ...-..+.|..+|++|+-++.=|
T Consensus 121 vgld~tV~lWd~~tg~~~~~~~~~------------------------------~~-~~~V~sv~fspdg~~lasgs~Dg 169 (420)
T 4gga_A 121 VALDNSVYLWSASSGDILQLLQME------------------------------QP-GEYISSVAWIKEGNYLAVGTSSA 169 (420)
T ss_dssp EEETTEEEEEETTTCCEEEEEECC------------------------------ST-TCCEEEEEECTTSSEEEEEETTS
T ss_pred EEeCCEEEEEECCCCCEEEEEEec------------------------------CC-CCcEEEEEECCCCCEEEEEECCC
Confidence 557999999999999999887420 00 01124578999999999988765
Q ss_pred -eEEEEeeeceeEEEecC
Q psy11868 107 -VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 107 -ikv~n~~t~~~~~~~g~ 123 (374)
|++.++.++++++.+-.
T Consensus 170 ~v~iWd~~~~~~~~~~~~ 187 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTS 187 (420)
T ss_dssp CEEEEETTTTEEEEEECC
T ss_pred eEEEEEcCCCcEEEEEeC
Confidence 89999999999988754
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.92 E-value=0.4 Score=45.67 Aligned_cols=71 Identities=8% Similarity=0.046 Sum_probs=54.7
Q ss_pred ccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCC
Q psy11868 16 DESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDS 95 (374)
Q Consensus 16 ~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s 95 (374)
.+.+..++ +-+.|+.|+|||..+++.++.+.. . ...-..+.|+.+
T Consensus 277 ~~~~~~l~--~~~~d~~i~vwd~~~~~~~~~~~~--------------------------------~-~~~v~~~~~~~~ 321 (464)
T 3v7d_B 277 SGHGNIVV--SGSYDNTLIVWDVAQMKCLYILSG--------------------------------H-TDRIYSTIYDHE 321 (464)
T ss_dssp EEETTEEE--EEETTSCEEEEETTTTEEEEEECC--------------------------------C-SSCEEEEEEETT
T ss_pred cCCCCEEE--EEeCCCeEEEEECCCCcEEEEecC--------------------------------C-CCCEEEEEEcCC
Confidence 45566666 667899999999999999877632 0 012346789999
Q ss_pred CceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 96 GFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 96 ~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
|++|+-++.=| |++.|+.++++++.+
T Consensus 322 ~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 322 RKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 99999888766 899999999888776
No 83
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.92 E-value=0.32 Score=43.82 Aligned_cols=74 Identities=12% Similarity=0.208 Sum_probs=52.9
Q ss_pred ecc-ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDE-SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~-~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.| .+..++ +.+.|+.|+|||..+|+..+.+.+. . .....-..+.|+
T Consensus 123 ~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~-----------------------------~-~~~~~v~~~~~~ 170 (366)
T 3k26_A 123 FHPRDPNLLL--SVSKDHALRLWNIQTDTLVAIFGGV-----------------------------E-GHRDEVLSADYD 170 (366)
T ss_dssp ECSSCTTEEE--EEETTSCEEEEETTTTEEEEEECST-----------------------------T-SCSSCEEEEEEC
T ss_pred ECCCCCCEEE--EEeCCCeEEEEEeecCeEEEEeccc-----------------------------c-cccCceeEEEEC
Confidence 445 556666 6678999999999999999887430 0 011123567899
Q ss_pred CCCceEEEeeeee-eEEEEeeeceeEEE
Q psy11868 94 DSGFIVLYATMLG-VKFVNIVTNQCVRF 120 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~t~~~~~~ 120 (374)
.+|++|+.++.=| |++.++.++++++.
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 198 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNA 198 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHH
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccc
Confidence 9999999887654 78888877766543
No 84
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.83 E-value=0.16 Score=47.00 Aligned_cols=71 Identities=14% Similarity=0.176 Sum_probs=49.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEE-EEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLT-RVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~-~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|.+..+| +-+.|+.|||||..+|+.. ..+... ....-..+.|.
T Consensus 178 ~~pdg~~la--sg~~dg~i~iwd~~~~~~~~~~~~~~--------------------------------h~~~v~~l~fs 223 (343)
T 3lrv_A 178 LHKDSLLLA--LYSPDGILDVYNLSSPDQASSRFPVD--------------------------------EEAKIKEVKFA 223 (343)
T ss_dssp ECTTSCEEE--EECTTSCEEEEESSCTTSCCEECCCC--------------------------------TTSCEEEEEEC
T ss_pred ECCCCCEEE--EEcCCCEEEEEECCCCCCCccEEecc--------------------------------CCCCEEEEEEe
Confidence 455566666 5578999999999999866 444210 01123477899
Q ss_pred CCCceEEEeeeeeeEEEEeeeceeEE
Q psy11868 94 DSGFIVLYATMLGVKFVNIVTNQCVR 119 (374)
Q Consensus 94 ~s~~~~~y~t~~gikv~n~~t~~~~~ 119 (374)
.+|++|+-++-=.|++.|+.++++++
T Consensus 224 ~~g~~l~s~~~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 224 DNGYWMVVECDQTVVCFDLRKDVGTL 249 (343)
T ss_dssp TTSSEEEEEESSBEEEEETTSSTTCB
T ss_pred CCCCEEEEEeCCeEEEEEcCCCCcce
Confidence 99999999875568888887766544
No 85
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=92.79 E-value=0.31 Score=44.32 Aligned_cols=65 Identities=12% Similarity=0.210 Sum_probs=50.6
Q ss_pred eeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeee
Q psy11868 25 LKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATM 104 (374)
Q Consensus 25 ~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~ 104 (374)
++-|.|+.|||||..+|++++++..- ...-..+.|..++++|+-++.
T Consensus 202 ~s~s~D~~i~iWd~~~~~~~~~~~~h---------------------------------~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 202 ITASDDLTIKIWDYQTKSCVATLEGH---------------------------------MSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECC---------------------------------SSCEEEEEECSSSSEEEEEET
T ss_pred EEEcCCCeEEEEeCCCCccceeeCCC---------------------------------CCCEEEEEECCCCCEEEEEcC
Confidence 36779999999999999998876420 011235679999999998876
Q ss_pred ee-eEEEEeeeceeEEEec
Q psy11868 105 LG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 105 ~g-ikv~n~~t~~~~~~~g 122 (374)
=| |++-|+.|+++.+.+.
T Consensus 249 Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 249 DGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp TSCEEEEETTTCCEEEEEC
T ss_pred CCeEEEEECCCCceeeecc
Confidence 55 8999999999888774
No 86
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.77 E-value=0.29 Score=45.10 Aligned_cols=86 Identities=13% Similarity=0.177 Sum_probs=58.1
Q ss_pred eccccceeeeeeecCC---CCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEE
Q psy11868 15 YDESLARFAELKLSET---EPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVL 91 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d---~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~ 91 (374)
++|.+..++ +.+.| +.|+|||..+++.++.+......- ...+ .+. .....-..+.
T Consensus 241 ~~~~~~~l~--~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~------~~~~------------~~~--~~~~~v~~~~ 298 (397)
T 1sq9_A 241 FSPQGSLLA--IAHDSNSFGCITLYETEFGERIGSLSVPTHSS------QASL------------GEF--AHSSWVMSLS 298 (397)
T ss_dssp ECSSTTEEE--EEEEETTEEEEEEEETTTCCEEEEECBC--------------------------CCB--SBSSCEEEEE
T ss_pred ECCCCCEEE--EEecCCCCceEEEEECCCCcccceeccCcccc------cccc------------ccc--ccCCcEEEEE
Confidence 456666666 56678 999999999999998885421000 0000 000 0112235788
Q ss_pred EcCCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 92 FDDSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 92 fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
|..+|++|+-++.=| |++.|+.++++++.+-
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 999999999888766 9999999999888774
No 87
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.72 E-value=0.45 Score=42.41 Aligned_cols=58 Identities=12% Similarity=0.015 Sum_probs=42.6
Q ss_pred CCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee-eeE
Q psy11868 30 TEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML-GVK 108 (374)
Q Consensus 30 d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~-gik 108 (374)
|..|++||..+|++.+.+.-. .....+.|+.+|+.|+.++.- .|.
T Consensus 259 ~~~v~~~d~~~~~~~~~~~~~----------------------------------~~~~~~~~s~dg~~l~~~~~~~~i~ 304 (337)
T 1pby_B 259 YNVLESFDLEKNASIKRVPLP----------------------------------HSYYSVNVSTDGSTVWLGGALGDLA 304 (337)
T ss_dssp ESEEEEEETTTTEEEEEEECS----------------------------------SCCCEEEECTTSCEEEEESBSSEEE
T ss_pred CCeEEEEECCCCcCcceecCC----------------------------------CceeeEEECCCCCEEEEEcCCCcEE
Confidence 567999999999988766320 123468899999987776542 388
Q ss_pred EEEeeeceeEEEe
Q psy11868 109 FVNIVTNQCVRFI 121 (374)
Q Consensus 109 v~n~~t~~~~~~~ 121 (374)
++|+.|+++++.+
T Consensus 305 v~d~~~~~~~~~~ 317 (337)
T 1pby_B 305 AYDAETLEKKGQV 317 (337)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECcCCcEEEEE
Confidence 8898888887665
No 88
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=92.68 E-value=0.41 Score=47.37 Aligned_cols=24 Identities=13% Similarity=0.321 Sum_probs=21.5
Q ss_pred eeecCCCCEEEEEeCCceEEEEee
Q psy11868 25 LKLSETEPVRVFSFLSGKLTRVYD 48 (374)
Q Consensus 25 ~~~~~d~~ir~f~~~tgkl~~~~d 48 (374)
|+.+.|++|||||..|||++++|.
T Consensus 299 ASgS~DgTIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 299 AAILTSGTIAIWDLLLGQCTALLP 322 (356)
T ss_dssp EEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEcCCCcEEEEECCCCcEEEEec
Confidence 466789999999999999999884
No 89
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.59 E-value=0.67 Score=42.36 Aligned_cols=94 Identities=10% Similarity=0.070 Sum_probs=58.5
Q ss_pred cceeeee-ecc-ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhccccccc
Q psy11868 8 SGKLTRV-YDE-SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQL 85 (374)
Q Consensus 8 ~~~~~~~-~~~-~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~ 85 (374)
.+.++.+ +.| .+..+| +.+.|+.|+|||..+++..+.+.... . . ............
T Consensus 43 ~~~v~~~~~s~~~~~~l~--~~~~dg~i~iw~~~~~~~~~~~~~~~------------~--~------~~~~~~~~~~~~ 100 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYML--SGGSDGVIVLYDLENSSRQSYYTCKA------------V--C------SIGRDHPDVHRY 100 (408)
T ss_dssp SSCEEEEEECTTTCCEEE--EEETTSCEEEEECCCCSSSSCEEECE------------E--E------EECTTCTTCCSS
T ss_pred CCcEEEEEEecCCCCEEE--EEcCCCeEEEEECCCCcccceEeccc------------c--c------cccccccccCCC
Confidence 3444443 667 777777 67789999999999987765543100 0 0 000000000112
Q ss_pred CcceEEEcC-CCceEEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 86 SLSNVLFDD-SGFIVLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 86 ~~~~~~fd~-s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
.-..+.|.. ++++|+-++.=| |++.|+.++++++.+..
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 140 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF 140 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC
Confidence 234677888 777888877655 89999999988887653
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.44 E-value=1.2 Score=42.57 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=45.7
Q ss_pred eeeee-ecc-ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCc
Q psy11868 10 KLTRV-YDE-SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSL 87 (374)
Q Consensus 10 ~~~~~-~~~-~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~ 87 (374)
.++.+ +.| .+..++ +.|.|+.|||||+.++.+...+... ......
T Consensus 166 ~V~~l~f~p~~~~~l~--s~s~D~~v~iwd~~~~~~~~~~~~~-------------------------------~~~~~~ 212 (435)
T 4e54_B 166 SITGLKFNPLNTNQFY--ASSMEGTTRLQDFKGNILRVFASSD-------------------------------TINIWF 212 (435)
T ss_dssp CCCEEEECSSCTTEEE--EECSSSCEEEEETTSCEEEEEECCS-------------------------------SCSCCC
T ss_pred CEEEEEEeCCCCCEEE--EEeCCCEEEEeeccCCceeEEeccC-------------------------------CCCccE
Confidence 34443 455 355666 7778999999999887664333210 001112
Q ss_pred ceEEEcCCCceEEEeeeee-eEEEEeeeceeEEE
Q psy11868 88 SNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRF 120 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~ 120 (374)
..+.|+.+|++|+-++.-| |++.|+.+..+..+
T Consensus 213 ~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~ 246 (435)
T 4e54_B 213 CSLDVSASSRMVVTGDNVGNVILLNMDGKELWNL 246 (435)
T ss_dssp CCEEEETTTTEEEEECSSSBEEEEESSSCBCCCS
T ss_pred EEEEECCCCCEEEEEeCCCcEeeeccCcceeEEE
Confidence 3456777777777776554 66777654444333
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.13 E-value=0.51 Score=43.48 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=56.2
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+ .++ +.+.|+.|+|||+.+++.++.+.... + .+ .....-..+.|+.
T Consensus 194 ~~~~~-~l~--~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~------h~---~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 194 ISERG-LIA--TGFNNGTVQISELSTLRPLYNFESQH------------------S------MI---NNSNSIRSVKFSP 243 (397)
T ss_dssp ECTTS-EEE--EECTTSEEEEEETTTTEEEEEEECCC------------------------------CCCCCEEEEEECS
T ss_pred ECCCc-eEE--EEeCCCcEEEEECCCCceeEEEeccc------------------c------cc---ccCCccceEEECC
Confidence 55656 554 66789999999999999998885310 0 00 0012335788999
Q ss_pred CCceEEEeeee----eeEEEEeeeceeEEEec
Q psy11868 95 SGFIVLYATML----GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t~~----gikv~n~~t~~~~~~~g 122 (374)
+|++|+.++.= -|++.|+.++++++.+-
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceec
Confidence 99999998875 58999999988877764
No 92
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=92.04 E-value=0.46 Score=48.14 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=57.2
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeec-hhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDE-SLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~de-s~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|.+..+| +-+.|+.|||||..+|+..+.+.+ ++. .. .-...-..+.|.
T Consensus 198 fspdg~~la--s~s~D~~i~lwd~~~g~~~~~~~~~~~~-------------------------~~--~h~~~V~~v~~s 248 (611)
T 1nr0_A 198 YNPDGSLFA--STGGDGTIVLYNGVDGTKTGVFEDDSLK-------------------------NV--AHSGSVFGLTWS 248 (611)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTCCEEEECBCTTSS-------------------------SC--SSSSCEEEEEEC
T ss_pred ECCCCCEEE--EEECCCcEEEEECCCCcEeeeecccccc-------------------------cc--ccCCCEEEEEEC
Confidence 456677776 777999999999999999988732 110 00 001122467899
Q ss_pred CCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 94 DSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
.+|++|+-++.=| |++.|+.++++++.+-
T Consensus 249 pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 249 PDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 9999998887654 8999999999887763
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.99 E-value=0.37 Score=46.32 Aligned_cols=73 Identities=7% Similarity=-0.003 Sum_probs=53.7
Q ss_pred eccc---cceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEE
Q psy11868 15 YDES---LARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVL 91 (374)
Q Consensus 15 ~~~~---~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~ 91 (374)
+.|. +..++ +-+.|++|||||+.+|++++.+-. .. ...-..+.
T Consensus 203 ~sp~~~~~~~l~--s~~~d~~i~vwd~~~~~~~~~~~~-------------------------------~h-~~~v~~~~ 248 (450)
T 2vdu_B 203 LIKDSDGHQFII--TSDRDEHIKISHYPQCFIVDKWLF-------------------------------GH-KHFVSSIC 248 (450)
T ss_dssp EEECTTSCEEEE--EEETTSCEEEEEESCTTCEEEECC-------------------------------CC-SSCEEEEE
T ss_pred EcCCCCCCcEEE--EEcCCCcEEEEECCCCceeeeeec-------------------------------CC-CCceEEEE
Confidence 4555 55665 667899999999999998877511 00 01234678
Q ss_pred EcCCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 92 FDDSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 92 fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
|. +|++|+.++.=| |++.|+.++++++.+-
T Consensus 249 ~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 249 CG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EC-STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred EC-CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 99 999999887543 8899999999888874
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=91.99 E-value=0.55 Score=44.73 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=23.6
Q ss_pred eEEEcCCCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 89 NVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 89 ~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
.+.|| +++|+-++.=| |++.|+.+++.++.+
T Consensus 367 ~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 367 CLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEC--CCEEEEEeCCCeEEEEECCCCceeeee
Confidence 45675 67888877665 889998888888766
No 95
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.97 E-value=0.62 Score=43.99 Aligned_cols=56 Identities=7% Similarity=0.142 Sum_probs=41.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-|.|+.|||||..|||+++.+-+. + ...-..+.|..
T Consensus 277 ~Spdg~~la--sgs~D~~V~iwd~~~~~~~~~~~~g-------------------------------H-~~~V~~v~fSp 322 (365)
T 4h5i_A 277 VDMKGELAV--LASNDNSIALVKLKDLSMSKIFKQA-------------------------------H-SFAITEVTISP 322 (365)
T ss_dssp ECTTSCEEE--EEETTSCEEEEETTTTEEEEEETTS-------------------------------S-SSCEEEEEECT
T ss_pred ECCCCCceE--EEcCCCEEEEEECCCCcEEEEecCc-------------------------------c-cCCEEEEEECC
Confidence 567777777 6678999999999999999876220 0 01124678999
Q ss_pred CCceEEEeee
Q psy11868 95 SGFIVLYATM 104 (374)
Q Consensus 95 s~~~~~y~t~ 104 (374)
+|++|+=++.
T Consensus 323 dg~~laS~S~ 332 (365)
T 4h5i_A 323 DSTYVASVSA 332 (365)
T ss_dssp TSCEEEEEET
T ss_pred CCCEEEEEeC
Confidence 9999887764
No 96
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.96 E-value=0.38 Score=43.37 Aligned_cols=78 Identities=6% Similarity=-0.040 Sum_probs=53.1
Q ss_pred eeeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE
Q psy11868 13 RVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f 92 (374)
+++++...+ +.++-+.|+.|++||..||++.+.+... .... .+.|
T Consensus 3 ~~~~~~~~~-~~v~~~~~~~v~~~d~~~~~~~~~~~~~---------------------------------~~~~-~~~~ 47 (331)
T 3u4y_A 3 AMFQTTSNF-GIVVEQHLRRISFFSTDTLEILNQITLG---------------------------------YDFV-DTAI 47 (331)
T ss_dssp ----CCCCE-EEEEEGGGTEEEEEETTTCCEEEEEECC---------------------------------CCEE-EEEE
T ss_pred eeEcCCCCE-EEEEecCCCeEEEEeCcccceeeeEEcc---------------------------------CCcc-eEEE
Confidence 455555444 2246668999999999999998877430 0112 7889
Q ss_pred cCCCceEEEeeee--eeEEEEeeecee-EEEecCCC
Q psy11868 93 DDSGFIVLYATML--GVKFVNIVTNQC-VRFIGKPE 125 (374)
Q Consensus 93 d~s~~~~~y~t~~--gikv~n~~t~~~-~~~~g~~e 125 (374)
+.+|++|+..+.- .|.++|+.++++ .+.+....
T Consensus 48 s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 48 TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred cCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 9999987776653 589999999998 66665443
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.81 E-value=0.58 Score=41.99 Aligned_cols=85 Identities=14% Similarity=0.182 Sum_probs=59.8
Q ss_pred ceeeee-eccc---cceeeeeeecCCCCEEEEEeCC-ceEE-EEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccc
Q psy11868 9 GKLTRV-YDES---LARFAELKLSETEPVRVFSFLS-GKLT-RVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKS 82 (374)
Q Consensus 9 ~~~~~~-~~~~---~~~~~~~~~~~d~~ir~f~~~t-gkl~-~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~ 82 (374)
+.++.+ +.|. +..+| +-+.|+.|+|||..+ ++.. +.+..
T Consensus 40 ~~v~~~~~~~~~~~g~~l~--~~~~dg~i~iw~~~~~~~~~~~~~~~--------------------------------- 84 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLI--AGSWANDVRCWEVQDSGQTIPKAQQM--------------------------------- 84 (368)
T ss_dssp SCEEEEEECCTTSSSEEEE--EEETTSEEEEEEECTTSCEEEEEEEE---------------------------------
T ss_pred CceEEEEEcCCCCCceEEE--EECCCCcEEEEEcCCCCceeEEEecc---------------------------------
Confidence 344443 5565 46666 677899999999998 6655 33321
Q ss_pred cccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEecCCCccc
Q psy11868 83 EQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIGKPENLR 128 (374)
Q Consensus 83 ~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~e~~r 128 (374)
....-..+.|..+|++|+-++.=| |++.|+.+++++++.+....++
T Consensus 85 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~ 131 (368)
T 3mmy_A 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK 131 (368)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred ccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE
Confidence 011234678999999999888776 8999999999999887655433
No 98
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.67 E-value=0.58 Score=45.74 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=29.8
Q ss_pred ceeeee-eccccceeeeeeecCCCCEEEEEeCCceEEEEee
Q psy11868 9 GKLTRV-YDESLARFAELKLSETEPVRVFSFLSGKLTRVYD 48 (374)
Q Consensus 9 ~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~d 48 (374)
+.++.+ +.|.+..+| +-+.|+.||||| .+|++++++.
T Consensus 17 ~~V~~~a~spdg~~la--s~~~d~~v~iWd-~~~~~~~~l~ 54 (577)
T 2ymu_A 17 SSVRGVAFSPDGQTIA--SASDDKTVKLWN-RNGQLLQTLT 54 (577)
T ss_dssp SCEEEEEECTTSSCEE--EEETTSEEEEEC-TTSCEEEEEE
T ss_pred CcEEEEEECCCCCEEE--EEeCCCEEEEEE-CCCCEEEEEe
Confidence 345555 788888887 667999999999 7999998874
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.55 E-value=0.46 Score=41.82 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=46.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+ +++ +.+.|+.|+|||+.+|++.+.+... ...-..+.|..
T Consensus 233 ~~~~~-~l~--~~~~dg~v~iwd~~~~~~~~~~~~~---------------------------------~~~i~~~~~~~ 276 (313)
T 3odt_A 233 LLPNG-DIV--SCGEDRTVRIWSKENGSLKQVITLP---------------------------------AISIWSVDCMS 276 (313)
T ss_dssp ECTTS-CEE--EEETTSEEEEECTTTCCEEEEEECS---------------------------------SSCEEEEEECT
T ss_pred EecCC-CEE--EEecCCEEEEEECCCCceeEEEecc---------------------------------CceEEEEEEcc
Confidence 34444 444 6778999999999999998877431 01234678999
Q ss_pred CCceEEEeeeeeeEEEEeeeceeEEE
Q psy11868 95 SGFIVLYATMLGVKFVNIVTNQCVRF 120 (374)
Q Consensus 95 s~~~~~y~t~~gikv~n~~t~~~~~~ 120 (374)
+|+++.-..==-|++.++.+++.+..
T Consensus 277 ~~~~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 277 NGDIIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TSCEEEEETTSCEEEEESCGGGCCC-
T ss_pred CCCEEEEeCCCcEEEEeCCCCceeeh
Confidence 99866533333478888777766543
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.55 E-value=0.63 Score=43.61 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=51.2
Q ss_pred ccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCC
Q psy11868 16 DESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDS 95 (374)
Q Consensus 16 ~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s 95 (374)
++.+..++ +-+.|+.|++||..+|++.+.+... ......+.|+.+
T Consensus 178 ~~~~~~~~--s~~~d~~v~~~d~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~ 222 (433)
T 3bws_A 178 PEHNELWV--SQMQANAVHVFDLKTLAYKATVDLT---------------------------------GKWSKILLYDPI 222 (433)
T ss_dssp GGGTEEEE--EEGGGTEEEEEETTTCCEEEEEECS---------------------------------SSSEEEEEEETT
T ss_pred cCCCEEEE--EECCCCEEEEEECCCceEEEEEcCC---------------------------------CCCeeEEEEcCC
Confidence 44555554 6668999999999999998877420 011246789999
Q ss_pred CceEEEeee--eeeEEEEeeeceeEEEec
Q psy11868 96 GFIVLYATM--LGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 96 ~~~~~y~t~--~gikv~n~~t~~~~~~~g 122 (374)
|+.++.... =-|+++|+.++++++.+.
T Consensus 223 ~~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 223 RDLVYCSNWISEDISVIDRKTKLEIRKTD 251 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred CCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence 998876653 248889998888877654
No 101
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=91.53 E-value=0.19 Score=44.59 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=34.7
Q ss_pred CeEeeeecceeeeee--------------ccccceeeeeeecCCCCEEEEEeCCceEEEEee
Q psy11868 1 VRVFSFLSGKLTRVY--------------DESLARFAELKLSETEPVRVFSFLSGKLTRVYD 48 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~d 48 (374)
||+|..-+|++.+++ .|.+..+| +-+.|+.|||||..+||+++.+.
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~--sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA--VGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE--EEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEE--EEECCCcEEEeecCCceeEEEec
Confidence 467777777765544 44555665 66789999999999999998874
No 102
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=91.52 E-value=0.57 Score=44.12 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=49.7
Q ss_pred cceeeeeeecCCCCEEEEEeC-CceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCc
Q psy11868 19 LARFAELKLSETEPVRVFSFL-SGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGF 97 (374)
Q Consensus 19 ~~~~~~~~~~~d~~ir~f~~~-tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~ 97 (374)
+..++ +-+.|++|||||.. +++.++++.. + ...-..+.|..+|+
T Consensus 218 ~~~l~--sgs~D~~v~~wd~~~~~~~~~~~~~--------------------------------h-~~~v~~v~~~p~~~ 262 (380)
T 3iz6_a 218 ANMFI--SGSCDTTVRLWDLRITSRAVRTYHG--------------------------------H-EGDINSVKFFPDGQ 262 (380)
T ss_dssp CCEEE--EEETTSCEEEEETTTTCCCCEEECC--------------------------------C-SSCCCEEEECTTSS
T ss_pred CCEEE--EEECCCeEEEEECCCCCcceEEECC--------------------------------c-CCCeEEEEEecCCC
Confidence 44555 66789999999997 4555555421 0 01224678999999
Q ss_pred eEEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 98 IVLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 98 ~~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
+|+-++.=| |++.|+.+++++.++..
T Consensus 263 ~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 263 RFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred eEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 998887654 89999999998887643
No 103
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.51 E-value=0.93 Score=40.75 Aligned_cols=35 Identities=14% Similarity=0.108 Sum_probs=27.9
Q ss_pred ce-EEEcCCCceEEEeeee----eeEEEEeeeceeEEEec
Q psy11868 88 SN-VLFDDSGFIVLYATML----GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 88 ~~-~~fd~s~~~~~y~t~~----gikv~n~~t~~~~~~~g 122 (374)
.. +.|+.+|++|+-...- -|.++++.++++++.+.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~ 125 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP 125 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE
Confidence 45 8899999998855555 38999999999888764
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.36 E-value=0.58 Score=42.41 Aligned_cols=88 Identities=16% Similarity=0.124 Sum_probs=51.5
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccc--cccCcceEEE
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKS--EQLSLSNVLF 92 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~--~~~~~~~~~f 92 (374)
+.|.+..++ +-+.|+.|+|||+.+..+.. ......+++++...+.+..- ....-..+.|
T Consensus 150 ~~~~~~~l~--~~~~dg~i~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 210 (372)
T 1k8k_C 150 WHPNSVLLA--AGSCDFKCRIFSAYIKEVEE-----------------RPAPTPWGSKMPFGELMFESSSSCGWVHGVCF 210 (372)
T ss_dssp ECTTSSEEE--EEETTSCEEEEECCCTTTSC-----------------CCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE
T ss_pred EcCCCCEEE--EEcCCCCEEEEEcccccccc-----------------cccccccccccchhhheEecCCCCCeEEEEEE
Confidence 456666666 66689999999975332110 01111222221111111110 0112357889
Q ss_pred cCCCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 93 DDSGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 93 d~s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+.+|++|+.++.=| |++.|+.++++++.+
T Consensus 211 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 211 SANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp CSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 99999999988765 899999888877665
No 105
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.11 E-value=0.74 Score=47.12 Aligned_cols=86 Identities=10% Similarity=0.059 Sum_probs=62.8
Q ss_pred Eeeeecceeeee-eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhccc
Q psy11868 3 VFSFLSGKLTRV-YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEK 81 (374)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~ 81 (374)
.|.--++.++.+ +.|.+..+| +.+.|+.|+|||..+|++++.+...
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la--~~~~~g~v~iwd~~~~~~~~~~~~~------------------------------- 54 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVL--TTLYSGRVEIWNYETQVEVRSIQVT------------------------------- 54 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEE--EEETTSEEEEEETTTTEEEEEEECC-------------------------------
T ss_pred eeecCCCceEEEEECCCCCEEE--EEeCCCEEEEEECCCCceEEEEecC-------------------------------
Confidence 344445555554 677777777 6668999999999999999877431
Q ss_pred ccccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 82 SEQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 82 ~~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
...-..+.|..+|++|+.++--| |+|.|+.+++++..+..
T Consensus 55 --~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 95 (814)
T 3mkq_A 55 --ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95 (814)
T ss_dssp --SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred --CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 01224678899999988887654 88999999998887754
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=91.08 E-value=1.1 Score=41.40 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=51.8
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
++|.+..++ ++.+.|++|++||..+|++.+.+... .....+.|+.
T Consensus 123 ~s~dg~~l~-~~~~~~~~v~~~d~~~~~~~~~~~~~----------------------------------~~~~~~~~~~ 167 (391)
T 1l0q_A 123 LSPDGKKLY-VTNNGDKTVSVINTVTKAVINTVSVG----------------------------------RSPKGIAVTP 167 (391)
T ss_dssp ECTTSSEEE-EEETTTTEEEEEETTTTEEEEEEECC----------------------------------SSEEEEEECT
T ss_pred ECCCCCEEE-EEeCCCCEEEEEECCCCcEEEEEecC----------------------------------CCcceEEECC
Confidence 455555554 24457999999999999998877420 0123677999
Q ss_pred CCceEEEeeeee--eEEEEeeeceeEEEecC
Q psy11868 95 SGFIVLYATMLG--VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 95 s~~~~~y~t~~g--ikv~n~~t~~~~~~~g~ 123 (374)
+|+.|+....-. |.++|+.++++++.+..
T Consensus 168 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 198 (391)
T 1l0q_A 168 DGTKVYVANFDSMSISVIDTVTNSVIDTVKV 198 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEec
Confidence 998876554332 89999999988877743
No 107
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=90.98 E-value=0.87 Score=43.36 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=30.4
Q ss_pred ceeeeeeccccceeeeeeecCCCCEEEEEeCCceEEEEee
Q psy11868 9 GKLTRVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYD 48 (374)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~d 48 (374)
+.+...+.+++..+| +-+.|+.|||||..+|++.+.+.
T Consensus 119 ~~v~~~~~~~g~~l~--sg~~dg~i~vwd~~~~~~~~~~~ 156 (445)
T 2ovr_B 119 DHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRTLV 156 (445)
T ss_dssp TSCEEEEEEETTEEE--EEETTSCEEEEETTTCCEEEECC
T ss_pred CCcEEEEEEcCCEEE--EEECCCcEEEEECCCCcEEEEEc
Confidence 334345777888887 67799999999999999998874
No 108
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.88 E-value=0.91 Score=42.59 Aligned_cols=96 Identities=10% Similarity=0.032 Sum_probs=61.2
Q ss_pred eecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCC-ceEEEeee
Q psy11868 26 KLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSG-FIVLYATM 104 (374)
Q Consensus 26 ~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~-~~~~y~t~ 104 (374)
+-+.|+.|||||..+|++.+++.-- ...-..+.|...| ++|+-++.
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~---------------------------------~~~v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVH---------------------------------SQNITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCC---------------------------------SSCEEEEEECSSSSCCEEEEET
T ss_pred EeecccceeEEECCCCcEeEEEecc---------------------------------ceeEEEEEEcCCCCCEEEEEeC
Confidence 5568999999999999887766320 0011245677665 45655554
Q ss_pred ee-eEEEEeeeceeEEEecCCCccccchhhcccccccccccccchhhhhccCCcccccCCCceEEEeeccCceeEEeec
Q psy11868 105 LG-VKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGFNKNRFYLFSR 182 (374)
Q Consensus 105 ~g-ikv~n~~t~~~~~~~g~~e~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~~~~~dp~l~~ta~~k~rfylfs~ 182 (374)
=| |+|.|+.++++++.+|-...++ ++ .-+| .|+.+|+|+-.-...+++.-
T Consensus 291 D~~i~iwd~~~~~~~~~~~H~~~V~------------------~v----afsP------~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 291 DCTVAVLDADFSEVFRDLSHRDFVT------------------GV----AWSP------LDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp TSCEEEECTTSCEEEEECCCSSCEE------------------EE----EECS------SSTTEEEEEETTSCEEEEEC
T ss_pred CCEEEEEECCCCcEeEECCCCCCEE------------------EE----EEeC------CCCCEEEEEcCCCeEEEEEC
Confidence 33 8999999999988775322111 11 0111 25667888877788888864
No 109
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.86 E-value=0.3 Score=44.98 Aligned_cols=79 Identities=10% Similarity=0.128 Sum_probs=51.3
Q ss_pred Eeeeecceeeee-eccccceeeeeeecCCCCEEEEEeCCc--eEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhc
Q psy11868 3 VFSFLSGKLTRV-YDESLARFAELKLSETEPVRVFSFLSG--KLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDL 79 (374)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tg--kl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~ 79 (374)
++.+..+.++.+ +.|.+..+| +-+.|+.|+|||..++ ++.+.+..
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~--~~~~d~~i~iw~~~~~~~~~~~~~~~------------------------------ 53 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFV--TTTATNQVELYEQDGNGWKHARTFSD------------------------------ 53 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEE--CCCSSSCBCEEEEETTEEEECCCBCC------------------------------
T ss_pred eEecCCCcEEEEEECCCCCEEE--EecCCCEEEEEEccCCceEEEEEEec------------------------------
Confidence 566666766654 778888887 6668999999999998 55544421
Q ss_pred ccccccCcceEEEcCCCceEEEeeeee-eEEEEeeece
Q psy11868 80 EKSEQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQ 116 (374)
Q Consensus 80 ~~~~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~ 116 (374)
. ...-..+.|..+|++|+.++.=| |++.|+.+++
T Consensus 54 --h-~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 54 --H-DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp --C-SSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred --C-CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 0 01224577888999999887643 8899998887
No 110
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.79 E-value=2.4 Score=43.38 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=53.1
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +.+.|+.|+|||..+|+.++.+... ...-..+.|..
T Consensus 63 ~s~~~~~l~--~~~~dg~i~vw~~~~~~~~~~~~~~---------------------------------~~~v~~~~~s~ 107 (814)
T 3mkq_A 63 FIARKNWII--VGSDDFRIRVFNYNTGEKVVDFEAH---------------------------------PDYIRSIAVHP 107 (814)
T ss_dssp EEGGGTEEE--EEETTSEEEEEETTTCCEEEEEECC---------------------------------SSCEEEEEECS
T ss_pred EeCCCCEEE--EEeCCCeEEEEECCCCcEEEEEecC---------------------------------CCCEEEEEEeC
Confidence 566677777 6678999999999999998877420 01234678999
Q ss_pred CCceEEEeeeee-eEEEEeeec-eeEEEec
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTN-QCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~-~~~~~~g 122 (374)
+|++|+.++-=| |++.|+.++ .+.+.+.
T Consensus 108 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 108 TKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp SSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence 999988877643 788888887 5555543
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=90.75 E-value=0.78 Score=43.64 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=62.3
Q ss_pred eeeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccch-hhhhhh---------------h
Q psy11868 13 RVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEF-GRRMAT---------------E 76 (374)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f-~rr~a~---------------e 76 (374)
-.++|.+..++ +-+.|+.|||||..+|++++++...-.. +-.+.| +++++. +
T Consensus 316 ~~~~~~~~~l~--sg~~dg~i~vwd~~~~~~~~~~~~h~~~----------v~~~~~~~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 316 TIYDHERKRCI--SASMDTTIRIWDLENGELMYTLQGHTAL----------VGLLRLSDKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEETTTTEEE--EEETTSCEEEEETTTTEEEEEECCCSSC----------EEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEcCCCCEEE--EEeCCCcEEEEECCCCcEEEEEeCCCCc----------EEEEEEcCCEEEEEeCCCcEEEEECCCCc
Confidence 35789999999 7889999999999999999998642110 111111 111111 0
Q ss_pred hhcccccccCcceEEEcCCCceEEEeeeeeeEEEEeeeceeEEE
Q psy11868 77 RDLEKSEQLSLSNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRF 120 (374)
Q Consensus 77 ~e~~~~~~~~~~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~ 120 (374)
+............+.|..+|++|+-++-=.|++.|+.++++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 384 RKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEES
T ss_pred eeeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEeh
Confidence 00000111223456888999999998866789999999988764
No 112
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.52 E-value=0.8 Score=41.10 Aligned_cols=75 Identities=9% Similarity=0.003 Sum_probs=47.4
Q ss_pred ccccceeeeeeecCCCCEEEEEeCCce-EEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEE---
Q psy11868 16 DESLARFAELKLSETEPVRVFSFLSGK-LTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVL--- 91 (374)
Q Consensus 16 ~~~~~~~~~~~~~~d~~ir~f~~~tgk-l~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~--- 91 (374)
.+.+..++ +.+.|+.|+|||..+++ ..+.+...- . ........+.
T Consensus 126 s~~~~~l~--~~~~d~~i~vwd~~~~~~~~~~~~~~~-------------------------~----~~~~~v~~~~~~~ 174 (357)
T 3i2n_A 126 GEGAPEIV--TGSRDGTVKVWDPRQKDDPVANMEPVQ-------------------------G----ENKRDCWTVAFGN 174 (357)
T ss_dssp C-CCCEEE--EEETTSCEEEECTTSCSSCSEEECCCT-------------------------T----SCCCCEEEEEEEC
T ss_pred CCCccEEE--EEeCCCeEEEEeCCCCCCcceeccccC-------------------------C----CCCCceEEEEEEe
Confidence 45566666 67789999999999987 555553200 0 0001112333
Q ss_pred -EcCCCceEEEeee-eeeEEEEeeeceeEEEe
Q psy11868 92 -FDDSGFIVLYATM-LGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 92 -fd~s~~~~~y~t~-~gikv~n~~t~~~~~~~ 121 (374)
|..++++|+.++. --|++.|+.++++....
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 206 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMALRWET 206 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCceeeec
Confidence 7889999998876 35888888888775543
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=90.23 E-value=4.4 Score=36.37 Aligned_cols=63 Identities=22% Similarity=0.204 Sum_probs=43.6
Q ss_pred cceeeeeeecCCCCEEEEEeCCceE--EEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCC-
Q psy11868 19 LARFAELKLSETEPVRVFSFLSGKL--TRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDS- 95 (374)
Q Consensus 19 ~~~~~~~~~~~d~~ir~f~~~tgkl--~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s- 95 (374)
+..++ +.+.|+.|+|||..+|+. .+.+.. ....-..+.|..+
T Consensus 69 ~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~~~---------------------------------~~~~v~~~~~~~~~ 113 (379)
T 3jrp_A 69 GTILA--SCSYDGKVLIWKEENGRWSQIAVHAV---------------------------------HSASVNSVQWAPHE 113 (379)
T ss_dssp CSEEE--EEETTSCEEEEEEETTEEEEEEEECC---------------------------------CSSCEEEEEECCGG
T ss_pred CCEEE--EeccCCEEEEEEcCCCceeEeeeecC---------------------------------CCcceEEEEeCCCC
Confidence 56666 677899999999999973 333311 0112346678887
Q ss_pred -CceEEEeeeee-eEEEEeeece
Q psy11868 96 -GFIVLYATMLG-VKFVNIVTNQ 116 (374)
Q Consensus 96 -~~~~~y~t~~g-ikv~n~~t~~ 116 (374)
|++|+.++.=| |++.++.+++
T Consensus 114 ~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 114 YGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp GCSEEEEEETTSEEEEEECCTTS
T ss_pred CCCEEEEecCCCcEEEEecCCCC
Confidence 88998887654 7888887763
No 114
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.11 E-value=1.2 Score=41.10 Aligned_cols=69 Identities=17% Similarity=0.200 Sum_probs=48.6
Q ss_pred eccccceeeeeeecCCCCEEEEEeCC-ceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLS-GKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~t-gkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|.+..+| +-+.|++|||||+.+ ++..+.++. ...-..+.|.
T Consensus 221 ~s~~g~~l~--sgs~dg~v~iwd~~~~~~~~~~~~~----------------------------------~~~v~~v~~s 264 (343)
T 2xzm_R 221 ISPNGKYIA--TGGKDKKLLIWDILNLTYPQREFDA----------------------------------GSTINQIAFN 264 (343)
T ss_dssp ECTTSSEEE--EEETTCEEEEEESSCCSSCSEEEEC----------------------------------SSCEEEEEEC
T ss_pred ECCCCCEEE--EEcCCCeEEEEECCCCcccceeecC----------------------------------CCcEEEEEEC
Confidence 567777776 677899999999843 332222211 0113467899
Q ss_pred CCCceEEEeeeeeeEEEEeeeceeEE
Q psy11868 94 DSGFIVLYATMLGVKFVNIVTNQCVR 119 (374)
Q Consensus 94 ~s~~~~~y~t~~gikv~n~~t~~~~~ 119 (374)
.++++|..++=-+|++.|+.+++...
T Consensus 265 p~~~~la~~~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 265 PKLQWVAVGTDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp SSSCEEEEEESSCEEEEESSSCCSCS
T ss_pred CCCCEEEEECCCCEEEEEeCCCCCCc
Confidence 99999998888889999998877654
No 115
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.08 E-value=1 Score=41.29 Aligned_cols=73 Identities=11% Similarity=0.226 Sum_probs=54.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +.+.|+.|+||| .+|++++.+.. ....-..+.|..
T Consensus 116 ~s~~~~~l~--~~~~dg~i~i~~-~~~~~~~~~~~---------------------------------~~~~v~~~~~~~ 159 (425)
T 1r5m_A 116 WSHDGNSIV--TGVENGELRLWN-KTGALLNVLNF---------------------------------HRAPIVSVKWNK 159 (425)
T ss_dssp ECTTSSEEE--EEETTSCEEEEE-TTSCEEEEECC---------------------------------CCSCEEEEEECT
T ss_pred EcCCCCEEE--EEeCCCeEEEEe-CCCCeeeeccC---------------------------------CCccEEEEEECC
Confidence 566677776 667899999999 88888877642 011234678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
+|++|+.++.=| |++.|+.++++++.+-.
T Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 160 DGTHIISMDVENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp TSSEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred CCCEEEEEecCCeEEEEECCCCcEEEEeec
Confidence 999998887644 89999999998887654
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.06 E-value=0.87 Score=40.03 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=50.3
Q ss_pred ecccc----ceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchh-------hhhhhh-----hh
Q psy11868 15 YDESL----ARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFG-------RRMATE-----RD 78 (374)
Q Consensus 15 ~~~~~----~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~-------rr~a~e-----~e 78 (374)
+.|.+ ..++ +.+.|+.|||||+.+++......+............. .....-| ....+. +.
T Consensus 222 ~~p~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (351)
T 3f3f_A 222 WAPSIGRWYQLIA--TGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSAD-VDMDAQGRSDSNTEEKAELQSNLQVEL 298 (351)
T ss_dssp ECCCSSCSSEEEE--EEETTSCEEEEEEEECC----------------------------------------CCSEEEEE
T ss_pred ECCCCCCcceEEE--EEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcc-cccccccccccccceeeeecccccccE
Confidence 45555 4455 6779999999999998776665554432221111110 0000000 000000 00
Q ss_pred cccc--cccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 79 LEKS--EQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 79 ~~~~--~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+... ....-..+.|..+|++|+-++.=| |++.++.+++..+.+.
T Consensus 299 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 299 LSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 0000 011234678999999999998777 8999999886655543
No 117
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.04 E-value=1.1 Score=42.23 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=48.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.+.+..++.+.-+.|+.|+|||..++++.+.+.- ... ...-..+.|..
T Consensus 311 ~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~------------------------------~~h-~~~v~~~~~s~ 359 (401)
T 4aez_A 311 WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI------------------------------PAH-DTRVLYSALSP 359 (401)
T ss_dssp ECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE------------------------------ECC-SSCCCEEEECT
T ss_pred ECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe------------------------------cCC-CCCEEEEEECC
Confidence 35566666622222799999999999988876531 000 11235678999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEE
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRF 120 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~ 120 (374)
+|++|+-++.=| |++.++.+++.++.
T Consensus 360 dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 360 DGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp TSSEEEEECTTSEEEEEECCC------
T ss_pred CCCEEEEEeCCCcEEEEECCCCccccc
Confidence 999999887655 78888888877654
No 118
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.02 E-value=2.2 Score=41.59 Aligned_cols=74 Identities=12% Similarity=0.118 Sum_probs=53.9
Q ss_pred ccccc-eeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 16 DESLA-RFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 16 ~~~~~-~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
.|.+. .++ +.+.|+.|+|||..++++.+.+...- .....-..+.|..
T Consensus 169 ~~~~~~~l~--~~~~d~~v~vwd~~~~~~~~~~~~~~------------------------------~~~~~v~~~~~~~ 216 (615)
T 1pgu_A 169 KQSRPMRSM--TVGDDGSVVFYQGPPFKFSASDRTHH------------------------------KQGSFVRDVEFSP 216 (615)
T ss_dssp CSSSSCEEE--EEETTTEEEEEETTTBEEEEEECSSS------------------------------CTTCCEEEEEECS
T ss_pred CCCCCcEEE--EEeCCCcEEEEeCCCcceeeeecccC------------------------------CCCceEEEEEECC
Confidence 34444 344 66789999999999999998774310 0001234678999
Q ss_pred C-CceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 95 S-GFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 95 s-~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
+ |++|+.++.=| |++.|+.++++++.+
T Consensus 217 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 217 DSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp TTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 9 99999887654 899999999988887
No 119
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=89.95 E-value=2.1 Score=38.60 Aligned_cols=76 Identities=16% Similarity=0.140 Sum_probs=52.2
Q ss_pred eecceeeee-eccccceeeeeeecCCCCEEEEEeC--CceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccc
Q psy11868 6 FLSGKLTRV-YDESLARFAELKLSETEPVRVFSFL--SGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKS 82 (374)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~--tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~ 82 (374)
--.+.++.+ +.|.+..+| +-+.|+.|+|||+. ++++.+.+..-
T Consensus 9 ~h~~~v~~~~~s~~~~~l~--~~~~dg~i~iw~~~~~~~~~~~~~~~h-------------------------------- 54 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLA--TCSSDKTIKIFEVEGETHKLIDTLTGH-------------------------------- 54 (379)
T ss_dssp ECCCCEEEEEECSSSSEEE--EEETTSCEEEEEEETTEEEEEEEECCC--------------------------------
T ss_pred CCcccEEEEEEcCCCCEEE--EEECCCcEEEEecCCCcceeeeEecCC--------------------------------
Confidence 334555554 788888887 66789999999998 77777666320
Q ss_pred cccCcceEEEcCC--CceEEEeeeee-eEEEEeeece
Q psy11868 83 EQLSLSNVLFDDS--GFIVLYATMLG-VKFVNIVTNQ 116 (374)
Q Consensus 83 ~~~~~~~~~fd~s--~~~~~y~t~~g-ikv~n~~t~~ 116 (374)
...-..+.|..+ +++|+-++.=| |++.++.+++
T Consensus 55 -~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 55 -EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp -SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred -CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 011134556544 88888877655 8889998886
No 120
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=89.64 E-value=1.5 Score=38.84 Aligned_cols=79 Identities=13% Similarity=0.002 Sum_probs=50.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
++|.+.+++ ++.+.|++|++||..||++.+.+.-.- .+ + .......+.|+.
T Consensus 41 ~s~dg~~l~-v~~~~~~~v~~~d~~~~~~~~~~~~~~-----------------~~-----~------~~~~~~~~~~s~ 91 (337)
T 1pby_B 41 VAPGGRIAY-ATVNKSESLVKIDLVTGETLGRIDLST-----------------PE-----E------RVKSLFGAALSP 91 (337)
T ss_dssp ECTTSSEEE-EEETTTTEEEEEETTTCCEEEEEECCB-----------------TT-----E------EEECTTCEEECT
T ss_pred EcCCCCEEE-EEeCCCCeEEEEECCCCCeEeeEEcCC-----------------cc-----c------ccccccceEECC
Confidence 344444433 234467889999999999887764210 00 0 001234788999
Q ss_pred CCceEEEee-------------eeeeEEEEeeeceeEEEec
Q psy11868 95 SGFIVLYAT-------------MLGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t-------------~~gikv~n~~t~~~~~~~g 122 (374)
.|++|++.. --.|.++++.++++++.+.
T Consensus 92 dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 92 DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 999888774 2468888888888877664
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=89.40 E-value=0.69 Score=41.50 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=53.5
Q ss_pred eeeee-eccccceeeeeeecCCCCEEEEEeCCce----EEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccc
Q psy11868 10 KLTRV-YDESLARFAELKLSETEPVRVFSFLSGK----LTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQ 84 (374)
Q Consensus 10 ~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tgk----l~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~ 84 (374)
.++.+ +.|.+..+| +.+.|+.|+|||+.+++ +...+.- .
T Consensus 13 ~v~~~~~s~~~~~l~--~~~~d~~v~iw~~~~~~~~~~~~~~~~~----------------------------------~ 56 (342)
T 1yfq_A 13 YISDIKIIPSKSLLL--ITSWDGSLTVYKFDIQAKNVDLLQSLRY----------------------------------K 56 (342)
T ss_dssp CEEEEEEEGGGTEEE--EEETTSEEEEEEEETTTTEEEEEEEEEC----------------------------------S
T ss_pred cEEEEEEcCCCCEEE--EEcCCCeEEEEEeCCCCccccceeeeec----------------------------------C
Confidence 34443 677788887 66789999999999886 3322210 0
Q ss_pred cCcceEEEcCCCc-eEEEeeeee-eEEEEe-eeceeEEEec
Q psy11868 85 LSLSNVLFDDSGF-IVLYATMLG-VKFVNI-VTNQCVRFIG 122 (374)
Q Consensus 85 ~~~~~~~fd~s~~-~~~y~t~~g-ikv~n~-~t~~~~~~~g 122 (374)
..-..+.|..+|+ +|+.++.=| |++.|+ .++++..+.+
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc
Confidence 1234677888899 888887655 888888 8888766665
No 122
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.24 E-value=1.5 Score=39.09 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=47.5
Q ss_pred eeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeee
Q psy11868 25 LKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATM 104 (374)
Q Consensus 25 ~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~ 104 (374)
++.+.|+.||+||..++++.+.+..- . ..-..+.|..+|++|+-++.
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h-------------------------------~--~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGH-------------------------------T--GYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCC-------------------------------S--SCEEEEEECTTSSEEEEEET
T ss_pred EEEcCCCEEEEEECCCCceeeEecCC-------------------------------C--CcEEEEEECCCCCEEEEEeC
Confidence 46678999999999999998877430 0 11235679999999888765
Q ss_pred ee-eEEEEeeeceeEEEec
Q psy11868 105 LG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 105 ~g-ikv~n~~t~~~~~~~g 122 (374)
=| |++.|+.+.+.++.+.
T Consensus 236 Dg~i~iwd~~~~~~~~~~~ 254 (340)
T 4aow_A 236 DGQAMLWDLNEGKHLYTLD 254 (340)
T ss_dssp TCEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEEeccCceeeeec
Confidence 43 7888888887776653
No 123
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.17 E-value=3.5 Score=37.90 Aligned_cols=105 Identities=13% Similarity=0.138 Sum_probs=65.6
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..++ +-+.|+.|++||. +|+.++.+.. . ...-..+.|..
T Consensus 171 ~~~~~~~l~--~~~~d~~i~i~d~-~~~~~~~~~~--------------------------------h-~~~v~~~~~~~ 214 (383)
T 3ei3_B 171 VSVSRQMLA--TGDSTGRLLLLGL-DGHEIFKEKL--------------------------------H-KAKVTHAEFNP 214 (383)
T ss_dssp EETTTTEEE--EEETTSEEEEEET-TSCEEEEEEC--------------------------------S-SSCEEEEEECS
T ss_pred ECCCCCEEE--EECCCCCEEEEEC-CCCEEEEecc--------------------------------C-CCcEEEEEECC
Confidence 455566666 6678999999998 6777766532 0 01224678999
Q ss_pred CCc-eEEEeeeee-eEEEEeee----ceeEEEecCCCccccchhhcccccccccccccchhhhhccCCcccccCC-CceE
Q psy11868 95 SGF-IVLYATMLG-VKFVNIVT----NQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQP-DPTL 167 (374)
Q Consensus 95 s~~-~~~y~t~~g-ikv~n~~t----~~~~~~~g~~e~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~~~~~-dp~l 167 (374)
+|+ +|+-++.=| |++.|+.+ +++++.++.... ...+ .-.+ |..+
T Consensus 215 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------------------v~~~-----------~~s~~~~~~ 265 (383)
T 3ei3_B 215 RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP------------------VNAA-----------YFNPTDSTK 265 (383)
T ss_dssp SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC------------------EEEE-----------EECTTTSCE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc------------------eEEE-----------EEcCCCCCE
Confidence 998 555555433 88888887 556555532211 1111 0113 5567
Q ss_pred EEeeccCceeEEeecCC
Q psy11868 168 FCTGFNKNRFYLFSRRE 184 (374)
Q Consensus 168 ~~ta~~k~rfylfs~~~ 184 (374)
++++....++++|.-+.
T Consensus 266 l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 266 LLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp EEEEESSSEEEEEETTB
T ss_pred EEEEcCCCcEEEEECCC
Confidence 88888888999997643
No 124
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.01 E-value=1.3 Score=39.56 Aligned_cols=71 Identities=4% Similarity=-0.033 Sum_probs=49.8
Q ss_pred ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCc
Q psy11868 18 SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGF 97 (374)
Q Consensus 18 ~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~ 97 (374)
.+..|+ +.+.|++|++||..||++.+.+.-. .......+.|+.+|+
T Consensus 10 ~~~~~v--~~~~~~~v~~~d~~~~~~~~~~~~~--------------------------------~~~~~~~~~~s~dg~ 55 (349)
T 1jmx_B 10 GHEYMI--VTNYPNNLHVVDVASDTVYKSCVMP--------------------------------DKFGPGTAMMAPDNR 55 (349)
T ss_dssp TCEEEE--EEETTTEEEEEETTTTEEEEEEECS--------------------------------SCCSSCEEEECTTSS
T ss_pred CCEEEE--EeCCCCeEEEEECCCCcEEEEEecC--------------------------------CCCCCceeEECCCCC
Confidence 334444 6668999999999999998877420 001234678999998
Q ss_pred eEEEeee--eeeEEEEeeeceeEEEec
Q psy11868 98 IVLYATM--LGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 98 ~~~y~t~--~gikv~n~~t~~~~~~~g 122 (374)
+++...- -.|.++|+.|+++++.+-
T Consensus 56 ~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 56 TAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 7665542 238899999999887653
No 125
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.90 E-value=0.81 Score=43.95 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=49.1
Q ss_pred eccccceeeeeeecCCCCEEEEEeC--CceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFL--SGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF 92 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~--tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f 92 (374)
+.|.+..++ |+-+.|+.|+|||+. +|+.++.+.+. .....-..+.|
T Consensus 110 ~s~d~~~l~-~~~~~dg~v~iwd~~~~~~~~~~~~~~~-------------------------------~~~~~v~~~~~ 157 (450)
T 2vdu_B 110 LTSDESRLI-ACADSDKSLLVFDVDKTSKNVLKLRKRF-------------------------------CFSKRPNAISI 157 (450)
T ss_dssp ECTTSSEEE-EEEGGGTEEEEEEECSSSSSCEEEEEEE-------------------------------ECSSCEEEEEE
T ss_pred EcCCCCEEE-EEECCCCeEEEEECcCCCCceeeeeecc-------------------------------cCCCCceEEEE
Confidence 567777753 356689999999999 99988887530 00012246789
Q ss_pred cCCCceEEEeeeee-eEEEEeeecee
Q psy11868 93 DDSGFIVLYATMLG-VKFVNIVTNQC 117 (374)
Q Consensus 93 d~s~~~~~y~t~~g-ikv~n~~t~~~ 117 (374)
+.+|++|+.++.-| |.++++.+++.
T Consensus 158 sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 158 AEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred cCCCCEEEEEeCCCcEEEEecCCccc
Confidence 99999999887533 56666665554
No 126
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=88.73 E-value=1.2 Score=39.81 Aligned_cols=58 Identities=17% Similarity=0.165 Sum_probs=43.6
Q ss_pred CCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee-eE
Q psy11868 30 TEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG-VK 108 (374)
Q Consensus 30 d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g-ik 108 (374)
+++|++||..+|++.+.++- + .....+.|+.+|+.|+....-| |+
T Consensus 274 ~~~v~~~d~~~~~~~~~~~~--------------------~--------------~~~~~~~~s~dg~~l~~~~~~~~v~ 319 (349)
T 1jmx_B 274 LNRLAKYDLKQRKLIKAANL--------------------D--------------HTYYCVAFDKKGDKLYLGGTFNDLA 319 (349)
T ss_dssp ESEEEEEETTTTEEEEEEEC--------------------S--------------SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred cCeEEEEECccCeEEEEEcC--------------------C--------------CCccceEECCCCCEEEEecCCCeEE
Confidence 78999999999999877742 0 0124678999998877754433 89
Q ss_pred EEEeeeceeEEEe
Q psy11868 109 FVNIVTNQCVRFI 121 (374)
Q Consensus 109 v~n~~t~~~~~~~ 121 (374)
++++.|+++++.+
T Consensus 320 v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 320 VFNPDTLEKVKNI 332 (349)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEeccccceeeee
Confidence 9999998887765
No 127
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=88.58 E-value=0.47 Score=45.17 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=34.8
Q ss_pred CeEeeeecceeeeee--------------ccccceeeeeeecCCCCEEEEEeCCceEEEEee
Q psy11868 1 VRVFSFLSGKLTRVY--------------DESLARFAELKLSETEPVRVFSFLSGKLTRVYD 48 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~d 48 (374)
||+|+.-+|++..++ .|.+..+| +-+.|+.|+|||..+||+++.+.
T Consensus 127 V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~la--sgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 127 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA--VGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE--EEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEE--EEECCCeEEEEEcCCCcEEEEEe
Confidence 567777777766554 34455665 66689999999999999998874
No 128
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.53 E-value=0.98 Score=49.09 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=58.3
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
.+.|.+..+| +.+.|++|+|||..||+.++.+..- ...-..+.|.
T Consensus 622 ~~s~~~~~l~--s~~~d~~i~vw~~~~~~~~~~~~~h---------------------------------~~~v~~~~~s 666 (1249)
T 3sfz_A 622 CFSQDGQRIA--SCGADKTLQVFKAETGEKLLDIKAH---------------------------------EDEVLCCAFS 666 (1249)
T ss_dssp EECTTSSEEE--EEETTSCEEEEETTTCCEEEEECCC---------------------------------SSCEEEEEEC
T ss_pred EECCCCCEEE--EEeCCCeEEEEECCCCCEEEEeccC---------------------------------CCCEEEEEEe
Confidence 4677777777 6779999999999999988876420 0122467899
Q ss_pred CCCceEEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 94 DSGFIVLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
.+|++|+-++.=| |+|.|+.|+++++.+-.
T Consensus 667 ~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 697 (1249)
T 3sfz_A 667 SDDSYIATCSADKKVKIWDSATGKLVHTYDE 697 (1249)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cCCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 9999998887644 99999999999988744
No 129
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=88.50 E-value=1.6 Score=39.07 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=47.8
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.+.+..++ +-+.|+.|++||..++++.....- ...-..+.|+.
T Consensus 176 ~~~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~~----------------------------------~~~v~~~~~~~ 219 (357)
T 3i2n_A 176 YNQEERVVC--AGYDNGDIKLFDLRNMALRWETNI----------------------------------KNGVCSLEFDR 219 (357)
T ss_dssp CC-CCCEEE--EEETTSEEEEEETTTTEEEEEEEC----------------------------------SSCEEEEEESC
T ss_pred cCCCCCEEE--EEccCCeEEEEECccCceeeecCC----------------------------------CCceEEEEcCC
Confidence 456677676 666899999999999997543211 01234677888
Q ss_pred ---CCceEEEeeeee-eEEEEeeeceeEE
Q psy11868 95 ---SGFIVLYATMLG-VKFVNIVTNQCVR 119 (374)
Q Consensus 95 ---s~~~~~y~t~~g-ikv~n~~t~~~~~ 119 (374)
++++|+.++.=| |++.++.+++.++
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 888888887654 7888887766543
No 130
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=88.16 E-value=0.8 Score=43.51 Aligned_cols=67 Identities=7% Similarity=0.059 Sum_probs=47.2
Q ss_pred eeeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE
Q psy11868 13 RVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f 92 (374)
.++.++.+....++-+.|++|||||..+|+.....-. . ...-..+.|
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~--------------------------------~-~~~V~svaf 367 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ--------------------------------L-GMPIVDFCW 367 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE--------------------------------C-SSCEEEEEE
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC--------------------------------C-CCcEEEEEE
Confidence 3444554544434556899999999999987765421 0 012246889
Q ss_pred cCCCceEEEeeeeeeEEEEe
Q psy11868 93 DDSGFIVLYATMLGVKFVNI 112 (374)
Q Consensus 93 d~s~~~~~y~t~~gikv~n~ 112 (374)
..+|++|..+|--|+.+|.+
T Consensus 368 spdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 368 HQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp CTTSSEEEEEESSEEEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999888754
No 131
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=88.13 E-value=1.1 Score=45.81 Aligned_cols=64 Identities=16% Similarity=0.147 Sum_probs=49.0
Q ss_pred eeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeee
Q psy11868 25 LKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATM 104 (374)
Q Consensus 25 ~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~ 104 (374)
++.|.|+.|||||..++++.+++.. + ...-..+.|..+|++|+-++.
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~--------------------------------h-~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAG--------------------------------H-TGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECC--------------------------------C-SSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcC--------------------------------C-CCCEEEEEEeCCCCEEEEEeC
Confidence 4677899999999999999877632 0 012246789999999998876
Q ss_pred ee-eEEEEeeeceeEEEe
Q psy11868 105 LG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 105 ~g-ikv~n~~t~~~~~~~ 121 (374)
=| |++.|+.++++++.+
T Consensus 582 Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp TSBCEEEETTTTEEEECC
T ss_pred CCeEEEEECCCCceEEEe
Confidence 65 899999888876654
No 132
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.03 E-value=0.83 Score=41.93 Aligned_cols=68 Identities=7% Similarity=0.070 Sum_probs=43.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceE---EEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEE
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKL---TRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVL 91 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl---~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~ 91 (374)
+.|.+..++ +.+.|+.|+|||+.+++. .+.+.. .....-..+.
T Consensus 108 ~~~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~~~~--------------------------------~h~~~v~~~~ 153 (377)
T 3dwl_C 108 WSPNEDKFA--VGSGARVISVCYFEQENDWWVSKHLKR--------------------------------PLRSTILSLD 153 (377)
T ss_dssp CCTTSSCCE--EEESSSCEEECCC-----CCCCEEECS--------------------------------SCCSCEEEEE
T ss_pred ECCCCCEEE--EEecCCeEEEEEECCcccceeeeEeec--------------------------------ccCCCeEEEE
Confidence 456666776 667899999999998873 333321 0112234678
Q ss_pred EcCCCceEEEeeeee-eEEEEeeece
Q psy11868 92 FDDSGFIVLYATMLG-VKFVNIVTNQ 116 (374)
Q Consensus 92 fd~s~~~~~y~t~~g-ikv~n~~t~~ 116 (374)
|..+|++|+.++.=| |++.|+.+++
T Consensus 154 ~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 154 WHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp ECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred EcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 999999999988766 8889986544
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=88.00 E-value=1.8 Score=37.14 Aligned_cols=30 Identities=3% Similarity=-0.014 Sum_probs=21.8
Q ss_pred ceEEEcCCCceEEEee-----eeeeEEEEeeecee
Q psy11868 88 SNVLFDDSGFIVLYAT-----MLGVKFVNIVTNQC 117 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t-----~~gikv~n~~t~~~ 117 (374)
..+.|..+|++|+|.+ ...|-++++.+++.
T Consensus 88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~ 122 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP 122 (297)
T ss_dssp SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC
T ss_pred cceEECCCCCEEEEEEeCCCCcceEEEEECCCCce
Confidence 4578999999999988 44566666555554
No 134
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=87.79 E-value=1.2 Score=43.40 Aligned_cols=78 Identities=10% Similarity=0.119 Sum_probs=55.5
Q ss_pred eccc-cceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDES-LARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~-~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|. +..++ +.+.|+.|+|||..+|++++.+.+.. . .....-..+.|.
T Consensus 214 ~~~~~~~~l~--~~~~dg~i~vwd~~~~~~~~~~~~~~----------------------------~-~~~~~v~~~~~~ 262 (615)
T 1pgu_A 214 FSPDSGEFVI--TVGSDRKISCFDGKSGEFLKYIEDDQ----------------------------E-PVQGGIFALSWL 262 (615)
T ss_dssp ECSTTCCEEE--EEETTCCEEEEETTTCCEEEECCBTT----------------------------B-CCCSCEEEEEES
T ss_pred ECCCCCCEEE--EEeCCCeEEEEECCCCCEeEEecccc----------------------------c-ccCCceEEEEEc
Confidence 5566 66666 66789999999999999998773210 0 000122467788
Q ss_pred CCCceEEEeeeee-eEEEEeeeceeEEEecCC
Q psy11868 94 DSGFIVLYATMLG-VKFVNIVTNQCVRFIGKP 124 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g~~ 124 (374)
+|++|+-++.=| |++.|+.++++++.+-..
T Consensus 263 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 263 -DSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp -SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred -CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 888888887655 899999999888776543
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=87.31 E-value=2.1 Score=43.35 Aligned_cols=71 Identities=4% Similarity=-0.039 Sum_probs=51.6
Q ss_pred eccccceeeeeeecCCCCEEEEEe--CCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE
Q psy11868 15 YDESLARFAELKLSETEPVRVFSF--LSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF 92 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~--~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f 92 (374)
++|.+.+.+ +.+.|.+|++||. .|+++++.+.- ......+.|
T Consensus 186 ~spdg~~l~--v~~~d~~V~v~D~~~~t~~~~~~i~~----------------------------------g~~p~~va~ 229 (543)
T 1nir_A 186 MSASGRYLL--VIGRDARIDMIDLWAKEPTKVAEIKI----------------------------------GIEARSVES 229 (543)
T ss_dssp ECTTSCEEE--EEETTSEEEEEETTSSSCEEEEEEEC----------------------------------CSEEEEEEE
T ss_pred ECCCCCEEE--EECCCCeEEEEECcCCCCcEEEEEec----------------------------------CCCcceEEe
Confidence 455555554 4567788999999 89988776521 012357889
Q ss_pred cC----CCceEEEeeee--eeEEEEeeeceeEEEe
Q psy11868 93 DD----SGFIVLYATML--GVKFVNIVTNQCVRFI 121 (374)
Q Consensus 93 d~----s~~~~~y~t~~--gikv~n~~t~~~~~~~ 121 (374)
+. +|++|.-++.. .|.|+|..|+++++++
T Consensus 230 sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 230 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred CCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 99 99998766643 5899999999998887
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=87.11 E-value=2 Score=38.52 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=50.6
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
.++|.+.+...+....|++|.+||..+|++.+.++.. | .....+.|+
T Consensus 147 ~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------------------~--------------~~~~~~~~s 193 (353)
T 3vgz_A 147 VADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-------------------G--------------KMSTGLALD 193 (353)
T ss_dssp EEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-------------------C--------------TTCCCCEEE
T ss_pred EECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-------------------C--------------CccceEEEC
Confidence 4566666655333345888999999999998877521 0 012356788
Q ss_pred CCCceEEEeeee-eeEEEEeeeceeEEEec
Q psy11868 94 DSGFIVLYATML-GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 94 ~s~~~~~y~t~~-gikv~n~~t~~~~~~~g 122 (374)
.+|++|...+.- .|.++|+.++++++.+.
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKK 223 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence 888887776542 36788888888776653
No 137
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.06 E-value=1.1 Score=40.26 Aligned_cols=82 Identities=12% Similarity=0.026 Sum_probs=54.6
Q ss_pred eecc-ccceeeeeeecCCCCEEEEEeCCc------eEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccC
Q psy11868 14 VYDE-SLARFAELKLSETEPVRVFSFLSG------KLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLS 86 (374)
Q Consensus 14 ~~~~-~~~~~~~~~~~~d~~ir~f~~~tg------kl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~ 86 (374)
.+.| .+..++ +.+.|+.|+||++.++ +....+...- ... . .......
T Consensus 200 ~~~~~~~~~l~--~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~-----------~~~-----------~--~~~~~~~ 253 (342)
T 1yfq_A 200 ALLPKEQEGYA--CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR-----------LNL-----------K--DTNLAYP 253 (342)
T ss_dssp EECSGGGCEEE--EEETTSEEEEEECCTTCCSTTCTTCEEEECCC-----------CCT-----------T--CCSSCCC
T ss_pred EECCCCCCEEE--EEecCCcEEEEEEcCCCcccccccceeeeccc-----------ccc-----------c--cccccee
Confidence 4566 777776 6678999999999887 6655554310 000 0 0000112
Q ss_pred cceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 87 LSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
-..+.|..+|++|+-++.=| |++.|+.++++++.+
T Consensus 254 i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred EEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 34678999999999888665 899999888877664
No 138
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=86.95 E-value=1.9 Score=39.72 Aligned_cols=71 Identities=8% Similarity=0.090 Sum_probs=50.0
Q ss_pred eccccc-eeeeeeecCCCCEEEEEeCC----ceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcce
Q psy11868 15 YDESLA-RFAELKLSETEPVRVFSFLS----GKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSN 89 (374)
Q Consensus 15 ~~~~~~-~~~~~~~~~d~~ir~f~~~t----gkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~ 89 (374)
+.|.+. .++ +.+.|+.|+|||..+ +++++.+.. ...-..
T Consensus 212 ~~~~~~~~l~--s~~~d~~i~iwd~~~~~~~~~~~~~~~~----------------------------------~~~v~~ 255 (383)
T 3ei3_B 212 FNPRCDWLMA--TSSVDATVKLWDLRNIKDKNSYIAEMPH----------------------------------EKPVNA 255 (383)
T ss_dssp ECSSCTTEEE--EEETTSEEEEEEGGGCCSTTCEEEEEEC----------------------------------SSCEEE
T ss_pred ECCCCCCEEE--EEeCCCEEEEEeCCCCCcccceEEEecC----------------------------------CCceEE
Confidence 556666 455 667899999999998 555554411 012357
Q ss_pred EEEcC-CCceEEEeeee-eeEEEEeeeceeEEEe
Q psy11868 90 VLFDD-SGFIVLYATML-GVKFVNIVTNQCVRFI 121 (374)
Q Consensus 90 ~~fd~-s~~~~~y~t~~-gikv~n~~t~~~~~~~ 121 (374)
+.|+. +|++|+-++.= -|++.|+.++++.+.+
T Consensus 256 ~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 88999 99999988763 4888888887765544
No 139
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=86.92 E-value=2.7 Score=36.79 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=48.7
Q ss_pred ceeeee-eccccceeeeeeecCCCCEEEEEeCCc----eEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhccccc
Q psy11868 9 GKLTRV-YDESLARFAELKLSETEPVRVFSFLSG----KLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSE 83 (374)
Q Consensus 9 ~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tg----kl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~ 83 (374)
+.++.+ ++|.+..+| +.+.|+.|||||+.++ ++.+.+..-
T Consensus 12 ~~v~~~~~~~~~~~l~--~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------------------------------- 56 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVA--TCSSDQHIKVFKLDKDTSNWELSDSWRAH--------------------------------- 56 (351)
T ss_dssp SCEEEEEECSSSSEEE--EEETTSEEEEEEECSSSCCEEEEEEEECC---------------------------------
T ss_pred cceeEEEEcCCCCEEE--EeeCCCeEEEEECCCCCCcceecceeccC---------------------------------
Confidence 344433 678888887 6779999999999987 344444220
Q ss_pred ccCcceEEEcC--CCceEEEeeeee-eEEEEeeece
Q psy11868 84 QLSLSNVLFDD--SGFIVLYATMLG-VKFVNIVTNQ 116 (374)
Q Consensus 84 ~~~~~~~~fd~--s~~~~~y~t~~g-ikv~n~~t~~ 116 (374)
...-..+.|.. ++++|+-++.=| |++.|+.+++
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 01123566766 488888887666 8888887763
No 140
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.83 E-value=2.4 Score=37.13 Aligned_cols=62 Identities=11% Similarity=0.143 Sum_probs=43.3
Q ss_pred eecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee
Q psy11868 26 KLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML 105 (374)
Q Consensus 26 ~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~ 105 (374)
+.+.|+.|+|||..+|++++.+... ...-..+.|..+|. |+.++.=
T Consensus 200 ~~~~dg~i~i~d~~~~~~~~~~~~~---------------------------------~~~i~~~~~~~~~~-l~~~~~d 245 (313)
T 3odt_A 200 SCSNDGLIKLVDMHTGDVLRTYEGH---------------------------------ESFVYCIKLLPNGD-IVSCGED 245 (313)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECC---------------------------------SSCEEEEEECTTSC-EEEEETT
T ss_pred EccCCCeEEEEECCchhhhhhhhcC---------------------------------CceEEEEEEecCCC-EEEEecC
Confidence 6779999999999999998877420 01224677888885 4444433
Q ss_pred -eeEEEEeeeceeEEEe
Q psy11868 106 -GVKFVNIVTNQCVRFI 121 (374)
Q Consensus 106 -gikv~n~~t~~~~~~~ 121 (374)
-|++.|+.++++++.+
T Consensus 246 g~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVI 262 (313)
T ss_dssp SEEEEECTTTCCEEEEE
T ss_pred CEEEEEECCCCceeEEE
Confidence 3788888887776655
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=86.73 E-value=2.6 Score=37.77 Aligned_cols=72 Identities=15% Similarity=0.099 Sum_probs=48.7
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
.++|.+..+. ++-..+..|.+||..+|++.+.+.- + ....+.|+
T Consensus 237 ~~s~dg~~l~-~~~~~~~~v~~~d~~~~~~~~~~~~--------------------~---------------~~~~~~~s 280 (353)
T 3vgz_A 237 SLDTARQRAF-ITDSKAAEVLVVDTRNGNILAKVAA--------------------P---------------ESLAVLFN 280 (353)
T ss_dssp EEETTTTEEE-EEESSSSEEEEEETTTCCEEEEEEC--------------------S---------------SCCCEEEE
T ss_pred EECCCCCEEE-EEeCCCCEEEEEECCCCcEEEEEEc--------------------C---------------CCceEEEC
Confidence 3455555544 2233568899999999998877742 0 11357899
Q ss_pred CCCceEEEeee--eeeEEEEeeeceeEEEe
Q psy11868 94 DSGFIVLYATM--LGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 94 ~s~~~~~y~t~--~gikv~n~~t~~~~~~~ 121 (374)
.+|++++...- =.|.++|+.|+++++.+
T Consensus 281 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 281 PARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 99998666543 34888888888877765
No 142
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=86.70 E-value=2.9 Score=38.79 Aligned_cols=59 Identities=7% Similarity=-0.031 Sum_probs=43.1
Q ss_pred CCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee---
Q psy11868 29 ETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML--- 105 (374)
Q Consensus 29 ~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~--- 105 (374)
.+..|.+||..||++.+.++.. .....+.+|..|+ +.+.++-
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g----------------------------------~~p~~i~~~~dG~-l~v~~~~~~~ 194 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIG----------------------------------IQPTSLVMDKYNK-MWTITDGGYE 194 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECS----------------------------------SCBCCCEECTTSE-EEEEBCCBCT
T ss_pred CCCEEEEEECCCCeEEEEEEcC----------------------------------CCccceEEcCCCC-EEEEECCCcc
Confidence 4788999999999988766320 1224678999998 5555553
Q ss_pred ---------eeEEEEeeeceeEEEec
Q psy11868 106 ---------GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 106 ---------gikv~n~~t~~~~~~~g 122 (374)
.|.++|..|+++++.+.
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred CCccccCCceEEEEECCCCeEEEEEe
Confidence 48999999999887663
No 143
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=86.61 E-value=2.3 Score=46.21 Aligned_cols=89 Identities=12% Similarity=0.173 Sum_probs=62.7
Q ss_pred CeEeeeecceeeeeec------------cccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccc
Q psy11868 1 VRVFSFLSGKLTRVYD------------ESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNME 68 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~ 68 (374)
|+||..-+|++.+.+. +.++....++-+.|+.|+|||..+|+...++..
T Consensus 681 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~------------------- 741 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG------------------- 741 (1249)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-------------------
T ss_pred EEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-------------------
Confidence 4566666666655543 322433444667899999999999998876632
Q ss_pred hhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 69 FGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 69 f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
. ...-..+.|..+|++|+-++.=| |++.|+.+++..+.+.
T Consensus 742 -------------h-~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 742 -------------H-TNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp -------------C-SSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred -------------C-CCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceec
Confidence 0 01224678999999999888755 8999999998887764
No 144
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=86.39 E-value=0.83 Score=46.42 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=51.8
Q ss_pred cceeeee---ecccc-ceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhccccc
Q psy11868 8 SGKLTRV---YDESL-ARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSE 83 (374)
Q Consensus 8 ~~~~~~~---~~~~~-~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~ 83 (374)
.+.++.| +.+.+ ..+| +.|.|++|||||..+++..+++.... .
T Consensus 308 ~~~V~sv~~~~s~~g~~~la--S~S~D~tvklWD~~~~~~~~~~~~~~-------------------------------~ 354 (524)
T 2j04_B 308 DSYILSVSTAYSDFEDTVVS--TVAVDGYFYIFNPKDIATTKTTVSRF-------------------------------R 354 (524)
T ss_dssp SSCEEEEEEECCTTSCCEEE--EEETTSEEEEECGGGHHHHCEEEEEC-------------------------------S
T ss_pred cccEEEEEEEcCCCCCeEEE--EeccCCeEEEEECCCCCccccccccc-------------------------------c
Confidence 3456666 34445 4566 77899999999999987655442100 0
Q ss_pred ccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 84 QLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 84 ~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
......+.|...|+.++-++.-+ ||+.|+.++++++.+
T Consensus 355 ~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l 393 (524)
T 2j04_B 355 GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL 393 (524)
T ss_dssp CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEE
T ss_pred cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceee
Confidence 00123578888888877665443 888888877765543
No 145
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=86.20 E-value=3.2 Score=39.56 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=25.5
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEe
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVY 47 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~ 47 (374)
+.|.+..++ +.|.|+.|||||..+|++...+
T Consensus 304 ~spdg~~l~--s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 304 FSPDGARLL--TTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp BCTTSSEEE--EEESSSCEEEEESSSSSSEEEE
T ss_pred ECCCCCeeE--EEcCCCEEEEEECCCCccceEE
Confidence 567777776 7779999999999999877665
No 146
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=85.89 E-value=2.1 Score=40.66 Aligned_cols=70 Identities=6% Similarity=0.076 Sum_probs=49.3
Q ss_pred ccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCC
Q psy11868 16 DESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDS 95 (374)
Q Consensus 16 ~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s 95 (374)
...+..++ +-+.|+.|+|||..+|++.+++... . ..-..+.| +
T Consensus 140 ~~d~~~l~--~g~~dg~i~iwd~~~~~~~~~~~~h-------------------------------~--~~v~~l~~--~ 182 (435)
T 1p22_A 140 QYDDQKIV--SGLRDNTIKIWDKNTLECKRILTGH-------------------------------T--GSVLCLQY--D 182 (435)
T ss_dssp ECCSSEEE--EEESSSCEEEEESSSCCEEEEECCC-------------------------------S--SCEEEEEC--C
T ss_pred EECCCEEE--EEeCCCeEEEEeCCCCeEEEEEcCC-------------------------------C--CcEEEEEE--C
Confidence 34566666 6679999999999999999887320 0 01123445 4
Q ss_pred CceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 96 GFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 96 ~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+++|+-++.=| |++.|+.++++++.+-
T Consensus 183 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 210 (435)
T 1p22_A 183 ERVIITGSSDSTVRVWDVNTGEMLNTLI 210 (435)
T ss_dssp SSEEEEEETTSCEEEEESSSCCEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence 67777777655 8899999988877763
No 147
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=85.68 E-value=2.4 Score=40.25 Aligned_cols=29 Identities=10% Similarity=0.177 Sum_probs=20.7
Q ss_pred ccceeeeeeecCCCCEEEEEeCCceEEEEee
Q psy11868 18 SLARFAELKLSETEPVRVFSFLSGKLTRVYD 48 (374)
Q Consensus 18 ~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~d 48 (374)
.+..++ +.+.|+.|+|||..+|++++.+.
T Consensus 265 ~~~~l~--s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 265 DDKYIV--SASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp ETTEEE--EEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEE--EEeCCCeEEEEECCcCcEEEEEc
Confidence 566777 56677777777777777777765
No 148
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.59 E-value=3.9 Score=37.50 Aligned_cols=72 Identities=15% Similarity=0.247 Sum_probs=47.3
Q ss_pred eccccceeeeeeecCCCCEEEEEeCC-c---eEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceE
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLS-G---KLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNV 90 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~t-g---kl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~ 90 (374)
+.|.+..+| +.|.|+.|||||..+ + ++++++.. . ...-..+
T Consensus 115 ~sp~g~~la--s~s~D~~v~iwd~~~~~~~~~~~~~~~~--------------------------------h-~~~v~~v 159 (330)
T 2hes_X 115 WSNDGYYLA--TCSRDKSVWIWETDESGEEYECISVLQE--------------------------------H-SQDVKHV 159 (330)
T ss_dssp ECTTSCEEE--EEETTSCEEEEECCTTCCCCEEEEEECC--------------------------------C-SSCEEEE
T ss_pred ECCCCCEEE--EEeCCCEEEEEeccCCCCCeEEEEEecc--------------------------------C-CCceEEE
Confidence 567777777 777999999999943 2 34443321 0 0122467
Q ss_pred EEcCCCceEEEeeeee-eEEEEeeec--eeEEEe
Q psy11868 91 LFDDSGFIVLYATMLG-VKFVNIVTN--QCVRFI 121 (374)
Q Consensus 91 ~fd~s~~~~~y~t~~g-ikv~n~~t~--~~~~~~ 121 (374)
.|..+|++|+-++.=| |++.++.++ ++++.+
T Consensus 160 ~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 160 IWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence 8999999988887654 788887765 444443
No 149
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=85.57 E-value=3.2 Score=38.35 Aligned_cols=69 Identities=9% Similarity=0.055 Sum_probs=46.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|++|||||..+++.....-- ...-...-..+.|..
T Consensus 24 ~sp~g~~la--s~~~D~~i~iw~~~~~~~~~~~~~------------------------------~~~h~~~v~~~~~sp 71 (345)
T 3fm0_A 24 WNPAGTLLA--SCGGDRRIRIWGTEGDSWICKSVL------------------------------SEGHQRTVRKVAWSP 71 (345)
T ss_dssp ECTTSSCEE--EEETTSCEEEEEEETTEEEEEEEE------------------------------CSSCSSCEEEEEECT
T ss_pred ECCCCCEEE--EEcCCCeEEEEEcCCCcceeeeee------------------------------ccccCCcEEEEEECC
Confidence 677788887 778999999999999875432210 000011224577999
Q ss_pred CCceEEEeeeee-eEEEEeeec
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTN 115 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~ 115 (374)
+|++|+-++.=| |++.++.++
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQD 93 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC
T ss_pred CCCEEEEEECCCcEEEEEccCC
Confidence 999999887644 667776655
No 150
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=85.30 E-value=1.7 Score=42.36 Aligned_cols=69 Identities=20% Similarity=0.259 Sum_probs=46.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +-+.|+.||||| .+|++++.+.- . ...-..+.|..
T Consensus 475 ~spd~~~la--s~~~d~~i~iw~-~~~~~~~~~~~--------------------------------h-~~~v~~l~~s~ 518 (577)
T 2ymu_A 475 FSPDGQTIA--SASDDKTVKLWN-RNGQLLQTLTG--------------------------------H-SSSVRGVAFSP 518 (577)
T ss_dssp ECTTSCEEE--EEETTSEEEEEE-TTSCEEEEEEC--------------------------------C-SSCEEEEEECT
T ss_pred EcCCCCEEE--EEeCCCEEEEEc-CCCCEEEEEeC--------------------------------C-CCCEEEEEEcC
Confidence 455566665 667899999999 68998887632 0 01123567999
Q ss_pred CCceEEEeeeee-eEEEEeeeceeEEE
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQCVRF 120 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~~~~ 120 (374)
+|++|+-++.=| |++.|. ++++++.
T Consensus 519 dg~~l~s~~~dg~v~lwd~-~~~~~~~ 544 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNR-NGQLLQT 544 (577)
T ss_dssp TSSCEEEEETTSEEEEECT-TSCEEEE
T ss_pred CCCEEEEEECcCEEEEEeC-CCCEEEE
Confidence 999998877544 666663 5555443
No 151
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.11 E-value=1.7 Score=39.56 Aligned_cols=61 Identities=8% Similarity=-0.006 Sum_probs=43.0
Q ss_pred eecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee
Q psy11868 26 KLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML 105 (374)
Q Consensus 26 ~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~ 105 (374)
+.+.|+.|+|||..+|++++.+.. . ...-..+.|..+|++|+-++.=
T Consensus 309 ~~~~~~~i~v~d~~~~~~~~~~~~--------------------------------~-~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 309 FVPYGSTIAVYTVYSGEQITMLKG--------------------------------H-YKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp EEEETTEEEEEETTTCCEEEEECC--------------------------------C-SSCEEEEEEETTTTEEEEEETT
T ss_pred EEecCCEEEEEECcCCcceeeecc--------------------------------C-CCeEEEEEEcCCCCEEEEECCC
Confidence 456899999999999999987743 0 0123467899999999988766
Q ss_pred e-eEEEEeeeceeEE
Q psy11868 106 G-VKFVNIVTNQCVR 119 (374)
Q Consensus 106 g-ikv~n~~t~~~~~ 119 (374)
| |++.++.+.+.+.
T Consensus 356 g~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 356 CNILAWVPSLYEPVP 370 (408)
T ss_dssp SCEEEEEECC-----
T ss_pred CeEEEEeCCCCCccC
Confidence 5 7888887776654
No 152
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=84.42 E-value=6 Score=36.24 Aligned_cols=69 Identities=6% Similarity=0.102 Sum_probs=46.2
Q ss_pred ccceeeeeeecCCCCEEEEEeCCce-------EEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceE
Q psy11868 18 SLARFAELKLSETEPVRVFSFLSGK-------LTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNV 90 (374)
Q Consensus 18 ~~~~~~~~~~~~d~~ir~f~~~tgk-------l~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~ 90 (374)
.+..+| +-|.|+.|||||..+++ ..+++ ..+ ...-..+
T Consensus 38 d~~~l~--sgs~D~~v~iWd~~~~~~~~~~~~~~~~l--------------------------------~~h-~~~V~~~ 82 (343)
T 2xzm_R 38 DSPVLI--SGSRDKTVMIWKLYEEEQNGYFGIPHKAL--------------------------------TGH-NHFVSDL 82 (343)
T ss_dssp CCCEEE--EEETTSCEEEEEECSSCCSSBSEEEEEEE--------------------------------CCC-SSCEEEE
T ss_pred CCCEEE--EEcCCCEEEEEECCcCCcccccccccchh--------------------------------ccC-CCceEEE
Confidence 455666 77799999999987643 22221 111 0112356
Q ss_pred EEcCCCceEEEeeeee-eEEEEeeeceeEEEe
Q psy11868 91 LFDDSGFIVLYATMLG-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 91 ~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~ 121 (374)
.|..++.+|+-++.=| |++.|+.++++++.+
T Consensus 83 ~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 114 (343)
T 2xzm_R 83 ALSQENCFAISSSWDKTLRLWDLRTGTTYKRF 114 (343)
T ss_dssp EECSSTTEEEEEETTSEEEEEETTSSCEEEEE
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 7889999988776544 888999998887665
No 153
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=84.00 E-value=3.6 Score=39.57 Aligned_cols=72 Identities=11% Similarity=0.169 Sum_probs=48.5
Q ss_pred eccccceeeeeeecCC---CCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEE
Q psy11868 15 YDESLARFAELKLSET---EPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVL 91 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d---~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~ 91 (374)
+.|.+.++| ..+.| ..|++||..||+..+.... ......+.
T Consensus 186 ~Spdg~~la--~~s~~~~~~~i~~~d~~tg~~~~l~~~----------------------------------~~~~~~~~ 229 (415)
T 2hqs_A 186 WSPDGSKLA--YVTFESGRSALVIQTLANGAVRQVASF----------------------------------PRHNGAPA 229 (415)
T ss_dssp ECTTSSEEE--EEECTTSSCEEEEEETTTCCEEEEECC----------------------------------SSCEEEEE
T ss_pred EcCCCCEEE--EEEecCCCcEEEEEECCCCcEEEeecC----------------------------------CCcccCEE
Confidence 455666666 44444 4899999999987643311 01124678
Q ss_pred EcCCCceEEEeee----eeeEEEEeeeceeEEEec
Q psy11868 92 FDDSGFIVLYATM----LGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 92 fd~s~~~~~y~t~----~gikv~n~~t~~~~~~~g 122 (374)
|..+|+.|+|... ..|.++|+.++++.++.+
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~ 264 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD 264 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC
Confidence 9999999998752 348889998888765543
No 154
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=83.63 E-value=0.36 Score=50.55 Aligned_cols=88 Identities=11% Similarity=0.042 Sum_probs=46.0
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceEEEEeec-------------hhHHHHHHHHhccCCCccchhhhhhhhhhcc
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDE-------------SLARFADLQKAKQQLPNMEFGRRMATERDLE 80 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~de-------------s~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~ 80 (374)
.++|.+..++ +.+.|+.|||||+.++.-....-+ +...+......+..+.-.+++++++++++++
T Consensus 261 ~~spdg~~l~--s~s~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~k~i~ 338 (753)
T 3jro_A 261 SWSLSGNVLA--LSGGDNKVTLWKENLEGKWEPAGEVHQGGGGSGGGGATSKEFDGPCQNEIDLLFSECNDEIDNAKLIM 338 (753)
T ss_dssp EECTTTCCEE--EECSSSCEECCBCCSSSCCBCCCCBC----------------------------------CCSHHHHH
T ss_pred EEcCCCCEEE--EEcCCCEEEEEecCCCCCcccccccccccCCCCCCccccccccCcCCchhhhhhcccccchHHHHHHH
Confidence 4567777776 677899999999996543222211 1122222222233566778899999999988
Q ss_pred ccccc--CcceEEEcCCCceEEEee
Q psy11868 81 KSEQL--SLSNVLFDDSGFIVLYAT 103 (374)
Q Consensus 81 ~~~~~--~~~~~~fd~s~~~~~y~t 103 (374)
+.... +...+.|+++|++|+-..
T Consensus 339 ~~~rl~s~~~~~~fs~dg~lL~~~~ 363 (753)
T 3jro_A 339 KERRFTASYTFAKFSTGSMLLTKDI 363 (753)
T ss_dssp HTTTCCSCCCCCCBCTTSCBCEECS
T ss_pred HHhhccCCcceeEeCCCCeeeeccC
Confidence 75322 234578999999988665
No 155
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=83.26 E-value=1.3 Score=41.54 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=26.2
Q ss_pred ceeeee-eccccceeeeeeecCCCCEEEEEeCCceEEEEe
Q psy11868 9 GKLTRV-YDESLARFAELKLSETEPVRVFSFLSGKLTRVY 47 (374)
Q Consensus 9 ~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~ 47 (374)
+.++.+ +.|.+.++. |+.|.|++|||||..+|++++.+
T Consensus 270 ~~v~~l~~sp~~~~~l-asgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 270 QNITGLAYSYHSSPFL-ASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp SCEEEEEECSSSSCCE-EEEETTSCEEEECTTSCEEEEEC
T ss_pred eeEEEEEEcCCCCCEE-EEEeCCCEEEEEECCCCcEeEEC
Confidence 334433 445554443 46778999999999999998754
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=82.83 E-value=3.2 Score=44.89 Aligned_cols=74 Identities=9% Similarity=0.107 Sum_probs=53.5
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +.+.|+.|++||..||++.++++.. ......+.|..
T Consensus 386 ~SpDG~~la--~~~~~~~v~~~d~~tg~~~~~~~~~---------------------------------~~~v~~~~~Sp 430 (1045)
T 1k32_A 386 VDRNGKFAV--VANDRFEIMTVDLETGKPTVIERSR---------------------------------EAMITDFTISD 430 (1045)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTCCEEEEEECS---------------------------------SSCCCCEEECT
T ss_pred ECCCCCEEE--EECCCCeEEEEECCCCceEEeccCC---------------------------------CCCccceEECC
Confidence 445555565 4557789999999999998776430 01224678999
Q ss_pred CCceEEEeeee-----------eeEEEEeeeceeEEEecC
Q psy11868 95 SGFIVLYATML-----------GVKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 95 s~~~~~y~t~~-----------gikv~n~~t~~~~~~~g~ 123 (374)
+|++|+|.+.- -|+++|+.++++..+.+.
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~ 470 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 470 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCC
Confidence 99999998874 489999999886555543
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=82.81 E-value=6.1 Score=37.30 Aligned_cols=34 Identities=9% Similarity=0.084 Sum_probs=27.4
Q ss_pred cceEEEcCCCceEEEeeee---eeEEEEeeeceeEEE
Q psy11868 87 LSNVLFDDSGFIVLYATML---GVKFVNIVTNQCVRF 120 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~---gikv~n~~t~~~~~~ 120 (374)
...+.|+.+|++|.-...- -|.|+|+.++++++.
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 4678999999998766542 389999999998876
No 158
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.79 E-value=2.9 Score=35.85 Aligned_cols=60 Identities=10% Similarity=0.088 Sum_probs=46.1
Q ss_pred cCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeeee
Q psy11868 28 SETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLGV 107 (374)
Q Consensus 28 ~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~gi 107 (374)
+.|++|++||..+|++.+.+.. ......+.|..+|++|++.+-=.|
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~----------------------------------~~~v~~~~~spdg~~l~~~~~~~i 64 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQT----------------------------------PELFEAPNWSPDGKYLLLNSEGLL 64 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEE----------------------------------SSCCEEEEECTTSSEEEEEETTEE
T ss_pred CcceeEEEEeCCCCceeeeccC----------------------------------CcceEeeEECCCCCEEEEEcCCeE
Confidence 4799999999999998865532 012346789999999999887678
Q ss_pred EEEEeee-ceeEEEe
Q psy11868 108 KFVNIVT-NQCVRFI 121 (374)
Q Consensus 108 kv~n~~t-~~~~~~~ 121 (374)
.++|+.+ +++.++.
T Consensus 65 ~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 65 YRLSLAGDPSPEKVD 79 (297)
T ss_dssp EEEESSSCCSCEECC
T ss_pred EEEeCCCCCCceEec
Confidence 8888888 7776654
No 159
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=82.26 E-value=2.8 Score=39.06 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=30.3
Q ss_pred ceEEEcCCCceEEEeeeee--eEEEEeeeceeEEEe
Q psy11868 88 SNVLFDDSGFIVLYATMLG--VKFVNIVTNQCVRFI 121 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~g--ikv~n~~t~~~~~~~ 121 (374)
..+.|..+|++|+-++.=| |++-|+.++++++.+
T Consensus 199 ~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp EEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 4678999999999999888 999999999988776
No 160
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=82.17 E-value=3.2 Score=41.99 Aligned_cols=74 Identities=16% Similarity=0.092 Sum_probs=53.2
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
.+||.+..++ +-+.|+.|+|||..||++++++.- | . ....+.|+
T Consensus 144 ~~~p~~~~~v--s~~~d~~V~v~D~~t~~~~~~i~~--------------------g-----------~---~~~~v~~s 187 (543)
T 1nir_A 144 DLDLPNLFSV--TLRDAGQIALVDGDSKKIVKVIDT--------------------G-----------Y---AVHISRMS 187 (543)
T ss_dssp CCCGGGEEEE--EEGGGTEEEEEETTTCCEEEEEEC--------------------S-----------T---TEEEEEEC
T ss_pred ccCCCCEEEE--EEcCCCeEEEEECCCceEEEEEec--------------------C-----------c---ccceEEEC
Confidence 4666554443 666899999999999999988842 0 0 01245699
Q ss_pred CCCceEEEeeee-eeEEEEe--eeceeEEEecC
Q psy11868 94 DSGFIVLYATML-GVKFVNI--VTNQCVRFIGK 123 (374)
Q Consensus 94 ~s~~~~~y~t~~-gikv~n~--~t~~~~~~~g~ 123 (374)
.+|++|.-++.- -|.++++ .|+++++.+--
T Consensus 188 pdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 188 ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp TTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred CCCCEEEEECCCCeEEEEECcCCCCcEEEEEec
Confidence 999988766542 2889999 89998877643
No 161
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=81.64 E-value=3.3 Score=38.09 Aligned_cols=68 Identities=6% Similarity=-0.028 Sum_probs=47.3
Q ss_pred ecc-ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDE-SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~-~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.| .+..++ +.+.|++|+|||..+|+.++.+.. . ...-..+.|.
T Consensus 270 ~s~~~~~~l~--s~~~dg~v~~wd~~~~~~~~~~~~--------------------------------~-~~~v~~~~~s 314 (416)
T 2pm9_A 270 WCHQDEHLLL--SSGRDNTVLLWNPESAEQLSQFPA--------------------------------R-GNWCFKTKFA 314 (416)
T ss_dssp ECSSCSSCEE--EEESSSEEEEECSSSCCEEEEEEC--------------------------------S-SSCCCCEEEC
T ss_pred eCCCCCCeEE--EEeCCCCEEEeeCCCCccceeecC--------------------------------C-CCceEEEEEC
Confidence 455 555665 677899999999999999887752 0 0123467888
Q ss_pred CCC-ceEEEeeeee-eEEEEeeecee
Q psy11868 94 DSG-FIVLYATMLG-VKFVNIVTNQC 117 (374)
Q Consensus 94 ~s~-~~~~y~t~~g-ikv~n~~t~~~ 117 (374)
.+| ++|+.++.=| |++.++.+.+.
T Consensus 315 ~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 315 PEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp TTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCCCEEEEEecCCcEEEEEccCCCC
Confidence 888 7777776543 67777766553
No 162
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=81.54 E-value=2.7 Score=38.66 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=47.2
Q ss_pred eccc-cceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDES-LARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~-~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|. +..++ +.+.|+.|+|||..+++..+.+...-. . .........+.|.
T Consensus 173 ~~~~~~~~l~--~~~~dg~v~iwd~~~~~~~~~~~~~~~-------------~--------------~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 173 WNQSLAHVFA--SAGSSNFASIWDLKAKKEVIHLSYTSP-------------N--------------SGIKQQLSVVEWH 223 (416)
T ss_dssp ECSSCTTEEE--EESSSSCEEEEETTTTEEEEEECCCCC-------------S--------------SCCCCCEEEEEEC
T ss_pred eCCCCCcEEE--EEcCCCCEEEEECCCCCcceEEecccc-------------c--------------cccCCceEEEEEC
Confidence 4555 44555 667899999999999999888743100 0 0001223567899
Q ss_pred CCC-ceEEEeeeee----eEEEEeeec
Q psy11868 94 DSG-FIVLYATMLG----VKFVNIVTN 115 (374)
Q Consensus 94 ~s~-~~~~y~t~~g----ikv~n~~t~ 115 (374)
.+| ++|+.++.-| |++.|+.++
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 987 5677776653 788887764
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=80.63 E-value=19 Score=32.85 Aligned_cols=117 Identities=12% Similarity=0.092 Sum_probs=63.5
Q ss_pred eccc-cceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDES-LARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~-~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+|+. +.-++ +-+.+.+|++||..||++++.+.-. .+|.+. ..-. .. +.++++
T Consensus 203 ~d~~~g~l~v--~d~~~~~I~~~~~~~G~~~~~~~~~-----------------~~~~~~------~~~~-~~-pg~~~~ 255 (329)
T 3fvz_A 203 LVPHLDQLCV--ADRENGRIQCFKTDTKEFVREIKHA-----------------SFGRNV------FAIS-YI-PGFLFA 255 (329)
T ss_dssp EETTTTEEEE--EETTTTEEEEEETTTCCEEEEECCT-----------------TTTTCE------EEEE-EE-TTEEEE
T ss_pred EECCCCEEEE--EECCCCEEEEEECCCCcEEEEEecc-----------------ccCCCc------ceee-ec-CCEEEE
Confidence 3454 33333 3446788999999999999887431 111110 0000 01 155666
Q ss_pred CCCceEEEe-eeeeeEEEEeeeceeEEEecCCCccccchhhcccccccccccccchhhhhccCCcccccCCCceEEEeec
Q psy11868 94 DSGFIVLYA-TMLGVKFVNIVTNQCVRFIGKPENLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLEAIQPDPTLFCTGF 172 (374)
Q Consensus 94 ~s~~~~~y~-t~~gikv~n~~t~~~~~~~g~~e~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~~~~~dp~l~~ta~ 172 (374)
..|+.++-. .-.-|++++..+++++..+|.... ....+..+++ .+|=.|+++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~------------~~~~p~~ia~-------------~~dG~lyvad~ 310 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK------------HFDMPHDIVA-------------SEDGTVYIGDA 310 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS------------CCSSEEEEEE-------------CTTSEEEEEES
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC------------ccCCeeEEEE-------------CCCCCEEEEEC
Confidence 666621111 111478899999999988863211 0001111111 12335788888
Q ss_pred cCceeEEeecC
Q psy11868 173 NKNRFYLFSRR 183 (374)
Q Consensus 173 ~k~rfylfs~~ 183 (374)
..+|.+.|...
T Consensus 311 ~~~~I~~~~~~ 321 (329)
T 3fvz_A 311 HTNTVWKFTLT 321 (329)
T ss_dssp SSCCEEEEEEE
T ss_pred CCCEEEEEeCC
Confidence 88999999653
No 164
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=80.46 E-value=11 Score=33.32 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=25.1
Q ss_pred cceEEEcCCCceEEEeeee-e-eEEEEe---eeceeEEEe
Q psy11868 87 LSNVLFDDSGFIVLYATML-G-VKFVNI---VTNQCVRFI 121 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~-g-ikv~n~---~t~~~~~~~ 121 (374)
...+.|+.+|++|+..+.- | |.++++ .+.+.++.+
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 125 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 125 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc
Confidence 3578899999998877652 3 888888 555555554
No 165
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=79.60 E-value=8.2 Score=36.38 Aligned_cols=69 Identities=9% Similarity=0.011 Sum_probs=42.4
Q ss_pred ceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCc-e
Q psy11868 20 ARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGF-I 98 (374)
Q Consensus 20 ~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~-~ 98 (374)
..+| +.|.|++|||||..+++.....-. . ...-..+.|..++. +
T Consensus 157 ~~la--s~s~D~tv~~Wd~~~~~~~~~~~~--------------------------------~-~~~v~~v~~~p~~~~~ 201 (393)
T 4gq1_A 157 QVIA--SVGDDCTLIIWRLTDEGPILAGYP--------------------------------L-SSPGISVQFRPSNPNQ 201 (393)
T ss_dssp EEEE--EEETTSEEEEEEEETTEEEEEEEE--------------------------------C-SSCEEEEEEETTEEEE
T ss_pred CEEE--EEECCCeEEEEECCCCceeeeecC--------------------------------C-CCCcEEEEECCCCCce
Confidence 4454 778999999999998876544421 0 01124678888774 5
Q ss_pred EEEeeeee-eEEEEeeeceeEEEecC
Q psy11868 99 VLYATMLG-VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 99 ~~y~t~~g-ikv~n~~t~~~~~~~g~ 123 (374)
|+-++.=| |++.|+.+++.......
T Consensus 202 l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 202 LIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp EEEEETTSEEEEEETTCCC-------
T ss_pred EEecCCCCEEEEEECCCCcccccccc
Confidence 66665544 88999988887665543
No 166
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=79.44 E-value=3.6 Score=44.40 Aligned_cols=64 Identities=17% Similarity=0.071 Sum_probs=45.7
Q ss_pred cceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCce
Q psy11868 19 LARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFI 98 (374)
Q Consensus 19 ~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~ 98 (374)
+..+| +.+.|+.|||||..+|++++.+.. . ..-..+.|+.+|++
T Consensus 69 g~~L~--S~s~D~~v~lWd~~~~~~~~~~~~--------------------------------~--~~V~~v~~sp~g~~ 112 (902)
T 2oaj_A 69 GIYLV--VINAKDTVYVLSLYSQKVLTTVFV--------------------------------P--GKITSIDTDASLDW 112 (902)
T ss_dssp TTEEE--EEETTCEEEEEETTTCSEEEEEEC--------------------------------S--SCEEEEECCTTCSE
T ss_pred CCEEE--EEECcCeEEEEECCCCcEEEEEcC--------------------------------C--CCEEEEEECCCCCE
Confidence 44454 677899999999999998877721 0 01245678888888
Q ss_pred EEEeeeee-eEEEEeeeceeE
Q psy11868 99 VLYATMLG-VKFVNIVTNQCV 118 (374)
Q Consensus 99 ~~y~t~~g-ikv~n~~t~~~~ 118 (374)
|+-++-=| |++.|+.++++.
T Consensus 113 l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 113 MLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp EEEEETTSCEEEEETTTTEEE
T ss_pred EEEEcCCCcEEEEECCCCccc
Confidence 88776544 788888887763
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=79.25 E-value=8.7 Score=35.08 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=23.0
Q ss_pred cceEEEcCCCceEEEeeee--eeEE--EEeeeceeEEE
Q psy11868 87 LSNVLFDDSGFIVLYATML--GVKF--VNIVTNQCVRF 120 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~--gikv--~n~~t~~~~~~ 120 (374)
...+.|+.+|++|+.+..- .|.+ +|..|+++..+
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp CCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred CceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 3478999999998887643 2556 45556665444
No 168
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=79.11 E-value=6.6 Score=36.16 Aligned_cols=71 Identities=15% Similarity=0.111 Sum_probs=46.4
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.|.+..+| +.+.|+.|||||..+++....... +... ...-..+.|..
T Consensus 113 ~sp~~~~l~--s~s~D~~v~iwd~~~~~~~~~~~~-----------------------------~~~h-~~~v~~~~~~p 160 (345)
T 3fm0_A 113 WAPSGNLLA--TCSRDKSVWVWEVDEEDEYECVSV-----------------------------LNSH-TQDVKHVVWHP 160 (345)
T ss_dssp ECTTSSEEE--EEETTSCEEEEEECTTSCEEEEEE-----------------------------ECCC-CSCEEEEEECS
T ss_pred EeCCCCEEE--EEECCCeEEEEECCCCCCeEEEEE-----------------------------ecCc-CCCeEEEEECC
Confidence 567777777 777999999999987743221100 0000 01124578999
Q ss_pred CCceEEEeeeee-eEEEEeeecee
Q psy11868 95 SGFIVLYATMLG-VKFVNIVTNQC 117 (374)
Q Consensus 95 s~~~~~y~t~~g-ikv~n~~t~~~ 117 (374)
+|++|+-++.=| |++.++.+++.
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~ 184 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDW 184 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEE
T ss_pred CCCEEEEEeCCCcEEEEEecCCCE
Confidence 999998887654 78888777653
No 169
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=79.00 E-value=4.5 Score=40.93 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=28.4
Q ss_pred cceEEEcCCCceEEEeee----------------------------------eeeEEEEeeeceeEEEe
Q psy11868 87 LSNVLFDDSGFIVLYATM----------------------------------LGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~----------------------------------~gikv~n~~t~~~~~~~ 121 (374)
...+.|..+|++|+|.++ .-|.++|+.++++.++.
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec
Confidence 357889999999999873 45889999999887765
No 170
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=78.75 E-value=8.9 Score=35.01 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=41.2
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCc--eEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSG--KLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF 92 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tg--kl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f 92 (374)
++.+++.+| +-+.|++|||||+.++ ++.+++.+. .-...-..+.|
T Consensus 20 ~~~s~~~la--s~~~D~~i~lw~~~~~~~~~~~~~~~~-------------------------------~h~~~v~~v~~ 66 (330)
T 2hes_X 20 FDFSQGILA--TGSTDRKIKLVSVKYDDFTLIDVLDET-------------------------------AHKKAIRSVAW 66 (330)
T ss_dssp EEEETTEEE--EEESSSCEEEEECSSSCCEEEEEECTT-------------------------------CCCSCEEEEEE
T ss_pred eccCCCEEE--EEcCCCEEEEEEecCCCeEEEEEEecC-------------------------------CccCCEEEEEE
Confidence 355666665 7789999999999986 444444210 00011235678
Q ss_pred cCCCceEEEeeeee-eEEEEee
Q psy11868 93 DDSGFIVLYATMLG-VKFVNIV 113 (374)
Q Consensus 93 d~s~~~~~y~t~~g-ikv~n~~ 113 (374)
..+|++|+-++.=| |++.|+.
T Consensus 67 sp~~~~las~s~D~~v~iw~~~ 88 (330)
T 2hes_X 67 RPHTSLLAAGSFDSTVSIWAKE 88 (330)
T ss_dssp CTTSSEEEEEETTSCEEEEEC-
T ss_pred CCCCCEEEEEeCCCcEEEEEcc
Confidence 88898888776533 5666653
No 171
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=77.85 E-value=2 Score=43.33 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=55.5
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHH----hccC-----------CCccchhhhhhhhhhc
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQK----AKQQ-----------LPNMEFGRRMATERDL 79 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~----~~~~-----------~~~~~f~rr~a~e~e~ 79 (374)
+.|.+..+| +.|.|+.|||||..+|++.+++...-.. ...+- .+.. +-+.+-++ ..+.+
T Consensus 247 ~spdg~~l~--s~s~D~~v~lWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~---~~~~~ 320 (611)
T 1nr0_A 247 WSPDGTKIA--SASADKTIKIWNVATLKVEKTIPVGTRI-EDQQLGIIWTKQALVSISANGFINFVNPELGS---IDQVR 320 (611)
T ss_dssp ECTTSSEEE--EEETTSEEEEEETTTTEEEEEEECCSSG-GGCEEEEEECSSCEEEEETTCCEEEEETTTTE---EEEEE
T ss_pred ECCCCCEEE--EEeCCCeEEEEeCCCCceeeeecCCCCc-cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC---cceEE
Confidence 445666676 7778999999999999999988532100 00000 0000 00000010 00001
Q ss_pred ccccccCcceEEEcCCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 80 EKSEQLSLSNVLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 80 ~~~~~~~~~~~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
..+ ...-..+.|..+|++|+=++.=| |++.|+.++++.++++
T Consensus 321 ~gh-~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~ 363 (611)
T 1nr0_A 321 YGH-NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 363 (611)
T ss_dssp CCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSS
T ss_pred cCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecc
Confidence 000 11123567888888888765433 7888888888877653
No 172
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=77.58 E-value=4 Score=41.46 Aligned_cols=96 Identities=8% Similarity=0.098 Sum_probs=60.0
Q ss_pred eeccccceeeeeeecC-CC-----CEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhh----hhccccc
Q psy11868 14 VYDESLARFAELKLSE-TE-----PVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATE----RDLEKSE 83 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~-d~-----~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e----~e~~~~~ 83 (374)
.+.|.+.++| +.+. |+ .|++||..+|+..+.++..-.. .. |+.++.| +|.....
T Consensus 43 ~~SpdG~~la--~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 43 KVAPDGSRVT--FLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL-----PG---------TETLSDEEKARRERQRIA 106 (741)
T ss_dssp EECTTSSEEE--EEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC----------------------------------
T ss_pred eEecCCCEEE--EEeccCCCCcccEEEEEECCCCceeEccchhhcc-----cc---------cccccchhhhhhhhhhhc
Confidence 4677777787 4555 77 8999999999999888653110 00 1111111 1111100
Q ss_pred -ccCcceEEEcCCCceEEEeeeeeeEEEEeeec---eeEEEecCCC
Q psy11868 84 -QLSLSNVLFDDSGFIVLYATMLGVKFVNIVTN---QCVRFIGKPE 125 (374)
Q Consensus 84 -~~~~~~~~fd~s~~~~~y~t~~gikv~n~~t~---~~~~~~g~~e 125 (374)
......+.|..+|++|+|.+---|.++|+.++ ++.++.+...
T Consensus 107 ~~~~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~ 152 (741)
T 2ecf_A 107 AMTGIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEG 152 (741)
T ss_dssp CCEESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSS
T ss_pred cccCcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCc
Confidence 01235789999999999998877999999998 7766655433
No 173
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=76.53 E-value=4.8 Score=38.67 Aligned_cols=43 Identities=14% Similarity=0.259 Sum_probs=30.4
Q ss_pred ceEEEcCCCceEEEeeeee----eEEEEeeeceeEEEecCCCccccc
Q psy11868 88 SNVLFDDSGFIVLYATMLG----VKFVNIVTNQCVRFIGKPENLRLL 130 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~g----ikv~n~~t~~~~~~~g~~e~~r~~ 130 (374)
..+.|..+|+.|+|.+--+ |.++|+.++...++.+....++.+
T Consensus 357 ~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~ 403 (415)
T 2hqs_A 357 ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFP 403 (415)
T ss_dssp EEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEE
T ss_pred CCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCC
Confidence 4678999999999998765 888888766665555544334433
No 174
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=76.39 E-value=6.6 Score=36.43 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=43.2
Q ss_pred CCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEe-----ee
Q psy11868 30 TEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYA-----TM 104 (374)
Q Consensus 30 d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~-----t~ 104 (374)
+.+|.+||..||+++++|+= + .+.... ......+.||..+.++... .-
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~---------------~-----------~~~~~~-~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYL---------------P-----------PPITLS-NSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CCEEEEEETTTTEEEEEEEC---------------C-----------TTTSCT-TCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred CCeEEEEECCCCeEEEEEEC---------------C-----------hhhccc-ccccceEEEecCCCEEEEEcCccCCC
Confidence 57888888889998887741 0 000011 1123578999654443332 23
Q ss_pred eeeEEEEeeeceeEEEecC
Q psy11868 105 LGVKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 105 ~gikv~n~~t~~~~~~~g~ 123 (374)
-+|.++++.++++.|++..
T Consensus 145 ~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp CEEEEEETTTCCEEEECTT
T ss_pred CeEEEEECCCCCEEEEecC
Confidence 5899999999999998854
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=75.80 E-value=8.8 Score=34.98 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=46.8
Q ss_pred eecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee
Q psy11868 26 KLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML 105 (374)
Q Consensus 26 ~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~ 105 (374)
+-+.|..|.+||-.|||+...+.-. . ......+.++..|++|+ ..-=
T Consensus 10 ~~~~~~~v~~~d~~tG~~~w~~~~~--------------------------~------~~~~~~~~~~pdG~ilv-s~~~ 56 (276)
T 3no2_A 10 GGSGWNKIAIINKDTKEIVWEYPLE--------------------------K------GWECNSVAATKAGEILF-SYSK 56 (276)
T ss_dssp ECTTCSEEEEEETTTTEEEEEEECC--------------------------T------TCCCCEEEECTTSCEEE-ECBS
T ss_pred eeCCCCEEEEEECCCCeEEEEeCCC--------------------------c------cCCCcCeEECCCCCEEE-eCCC
Confidence 4557999999999999999988530 0 01123556778888776 5566
Q ss_pred eeEEEEeeeceeEEEecC
Q psy11868 106 GVKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 106 gikv~n~~t~~~~~~~g~ 123 (374)
+|..+|. +++++.-+..
T Consensus 57 ~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAA 73 (276)
T ss_dssp EEEEECT-TSCEEEEEEC
T ss_pred CEEEECC-CCCEEEEEcC
Confidence 7899998 8888887754
No 176
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=75.35 E-value=5.7 Score=35.17 Aligned_cols=28 Identities=14% Similarity=0.010 Sum_probs=20.9
Q ss_pred cceEEEcCCCceEEEeeee--eeEEEEeee
Q psy11868 87 LSNVLFDDSGFIVLYATML--GVKFVNIVT 114 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~--gikv~n~~t 114 (374)
..++.||+.|+.|..++.- ||.++++.+
T Consensus 270 ~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 270 PSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 4578899999987777766 777777643
No 177
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=73.98 E-value=5.1 Score=40.72 Aligned_cols=36 Identities=6% Similarity=0.164 Sum_probs=30.8
Q ss_pred cceEEEcCCCceEEEeeeeeeEEEEeeeceeEEEec
Q psy11868 87 LSNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~~g 122 (374)
...+.|..+|+.|+|.+--.|.++|+.++++.++..
T Consensus 154 ~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 154 ATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp EEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred cccccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 356889999999999987789999999999888753
No 178
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=73.32 E-value=12 Score=33.84 Aligned_cols=20 Identities=10% Similarity=0.011 Sum_probs=17.2
Q ss_pred EEEEec-ccchHHHHHHHhhh
Q psy11868 232 IHLQLF-KECAKTVENFCVHS 251 (374)
Q Consensus 232 I~IeLf-d~aPktveNF~~L~ 251 (374)
++.+|. +.||+||+.|.+..
T Consensus 35 ~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 35 CKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEccccChHHHHHHHHhC
Confidence 678888 89999999998864
No 179
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=73.11 E-value=13 Score=38.72 Aligned_cols=74 Identities=16% Similarity=0.162 Sum_probs=51.6
Q ss_pred cceeeee-eccccceeeeeeecCCCCEEEEEeC--CceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccc
Q psy11868 8 SGKLTRV-YDESLARFAELKLSETEPVRVFSFL--SGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQ 84 (374)
Q Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~d~~ir~f~~~--tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~ 84 (374)
.|.++.+ ++|.+..+| +.+.|+.|+|||.. +++..+++.. + .
T Consensus 9 ~~~V~~l~~s~dg~~la--tg~~dg~I~vwd~~~~~~~~~~~l~~--------------------------------h-~ 53 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLA--TCSSDKTIKIFEVEGETHKLIDTLTG--------------------------------H-E 53 (753)
T ss_dssp CCCEEEECCCSSSCCEE--EEETTTEEEEEEEETTEEEEEEEECC--------------------------------C-S
T ss_pred cceeEEEEECCCCCeEE--EEECCCcEEEEecCCCCCccceeccC--------------------------------C-c
Confidence 3444443 678888887 66789999999998 6666665532 0 0
Q ss_pred cCcceEEEcCC--CceEEEeeeee-eEEEEeeece
Q psy11868 85 LSLSNVLFDDS--GFIVLYATMLG-VKFVNIVTNQ 116 (374)
Q Consensus 85 ~~~~~~~fd~s--~~~~~y~t~~g-ikv~n~~t~~ 116 (374)
..-..+.|..+ |++|+-++.=| |++.++.+++
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 11235567655 88888888766 8999998886
No 180
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=72.89 E-value=18 Score=34.64 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=44.5
Q ss_pred CCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee---e
Q psy11868 31 EPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG---V 107 (374)
Q Consensus 31 ~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g---i 107 (374)
..|-|+|..|+|+++.+.= | .....+.|+..|+.++|.+-.| +
T Consensus 298 ~~V~VID~~t~~vv~~i~~--------------------g--------------~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISL--------------------G--------------HDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred CeEEEEECCCCEEEEEEEC--------------------C--------------CCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 4688899999999887721 0 1246788999999889987654 8
Q ss_pred EEEEeeeceeEEE
Q psy11868 108 KFVNIVTNQCVRF 120 (374)
Q Consensus 108 kv~n~~t~~~~~~ 120 (374)
-|+|+.|+++++.
T Consensus 344 ~ViD~~t~~vv~~ 356 (373)
T 2mad_H 344 HIYDAGAGDQDQS 356 (373)
T ss_pred EEEECCCCCEEee
Confidence 8999999999987
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=72.74 E-value=13 Score=32.92 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=21.5
Q ss_pred cceEEEcCCCceEEEeeeeeeEEEEeeeceeEEEe
Q psy11868 87 LSNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~~ 121 (374)
...+.||..|+++ .++--||.++|.. +++++.+
T Consensus 220 p~~i~~d~~G~l~-v~~~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 220 TDGLRVDAGGLIW-ASAGDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp CCSEEEBTTSCEE-EEETTEEEEECTT-SCEEEEE
T ss_pred CCeEEECCCCCEE-EEcCCeEEEECCC-CCEEEEE
Confidence 3578999999843 3444567777764 5555444
No 182
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=72.16 E-value=25 Score=30.91 Aligned_cols=31 Identities=3% Similarity=0.034 Sum_probs=20.9
Q ss_pred ceEEEcCCCceEEEeee--eeeEEEEeee-ceeE
Q psy11868 88 SNVLFDDSGFIVLYATM--LGVKFVNIVT-NQCV 118 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~--~gikv~n~~t-~~~~ 118 (374)
..+.|+.+|++|+..+. -.|.++++.+ +++.
T Consensus 132 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred eEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 45779999998876652 2367777776 5443
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=72.05 E-value=8 Score=34.77 Aligned_cols=73 Identities=8% Similarity=0.003 Sum_probs=43.8
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
++|+.+..++ +-+.+..|++||..+|++.+..... ......+.||
T Consensus 51 ~~~~~g~l~~--~~~~~~~i~~~d~~~~~~~~~~~~~---------------------------------~~~~~~i~~~ 95 (333)
T 2dg1_A 51 NFDRQGQLFL--LDVFEGNIFKINPETKEIKRPFVSH---------------------------------KANPAAIKIH 95 (333)
T ss_dssp EECTTSCEEE--EETTTCEEEEECTTTCCEEEEEECS---------------------------------SSSEEEEEEC
T ss_pred EECCCCCEEE--EECCCCEEEEEeCCCCcEEEEeeCC---------------------------------CCCcceEEEC
Confidence 4555555443 2235667777777777766544210 0123467899
Q ss_pred CCCceEEEeee-----eeeEEEEeeeceeEEEe
Q psy11868 94 DSGFIVLYATM-----LGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 94 ~s~~~~~y~t~-----~gikv~n~~t~~~~~~~ 121 (374)
..|++++-..- -+|.++|..++++.+++
T Consensus 96 ~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 96 KDGRLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 99986554433 26888888887776554
No 184
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=71.26 E-value=9.1 Score=37.86 Aligned_cols=74 Identities=9% Similarity=0.001 Sum_probs=50.9
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+.++++..+.++ +.+..+.|||..||++.+..+. . ...+.|+.
T Consensus 117 ~s~dg~~~~~~s-~~~~~~~l~d~~~g~~~~l~~~--------------------------------~----~~~~~~sp 159 (582)
T 3o4h_A 117 GVDTGEAVVFTG-ATEDRVALYALDGGGLRELARL--------------------------------P----GFGFVSDI 159 (582)
T ss_dssp EEECSSCEEEEE-ECSSCEEEEEEETTEEEEEEEE--------------------------------S----SCEEEEEE
T ss_pred eCCCCCeEEEEe-cCCCCceEEEccCCcEEEeecC--------------------------------C----CceEEECC
Confidence 344555555332 3455566999999988766531 0 14678999
Q ss_pred CCceEEEeeee-----eeEEEEeeeceeEEEecCCC
Q psy11868 95 SGFIVLYATML-----GVKFVNIVTNQCVRFIGKPE 125 (374)
Q Consensus 95 s~~~~~y~t~~-----gikv~n~~t~~~~~~~g~~e 125 (374)
+|++|+|.+.- -|.++|+.++++.++.+...
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~ 195 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG 195 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC
Confidence 99999987653 48899999999887766543
No 185
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=70.98 E-value=14 Score=36.79 Aligned_cols=36 Identities=11% Similarity=0.080 Sum_probs=29.6
Q ss_pred cceEEEcCCCceEEEeeee---eeEEEEeeeceeEEEec
Q psy11868 87 LSNVLFDDSGFIVLYATML---GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~---gikv~n~~t~~~~~~~g 122 (374)
..++.|+..|++|.-.... .|-|||+.|+++++.+-
T Consensus 179 P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 4588999999998776653 48999999999998763
No 186
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=70.53 E-value=12 Score=36.37 Aligned_cols=64 Identities=11% Similarity=0.034 Sum_probs=42.3
Q ss_pred eccc-cceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEc
Q psy11868 15 YDES-LARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFD 93 (374)
Q Consensus 15 ~~~~-~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd 93 (374)
+.|. +..+| +.+.|++|||||..+++....... . ...-..+.|.
T Consensus 157 ~~p~~~~~la--s~s~Dg~v~iwD~~~~~~~~~~~~--------------------------------~-~~~v~~v~ws 201 (434)
T 2oit_A 157 WNPTVPSMVA--VCLADGSIAVLQVTETVKVCATLP--------------------------------S-TVAVTSVCWS 201 (434)
T ss_dssp ECSSCTTEEE--EEETTSCEEEEEESSSEEEEEEEC--------------------------------G-GGCEEEEEEC
T ss_pred ECCCCCCEEE--EEECCCeEEEEEcCCCcceeeccC--------------------------------C-CCceeEEEEc
Confidence 4555 45566 677899999999999976543321 0 0123467899
Q ss_pred CCCceEEEeeeee-eEEEEee
Q psy11868 94 DSGFIVLYATMLG-VKFVNIV 113 (374)
Q Consensus 94 ~s~~~~~y~t~~g-ikv~n~~ 113 (374)
.+|++|+-++.=| |++.++.
T Consensus 202 pdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 202 PKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TTSSCEEEEETTSCEEEECTT
T ss_pred CCCCEEEEEcCCCcEEEEccC
Confidence 8999998877543 4555544
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=69.88 E-value=10 Score=34.99 Aligned_cols=31 Identities=6% Similarity=0.073 Sum_probs=24.2
Q ss_pred cceEEEcCCCceEEEeeeeeeEEEEeeeceeE
Q psy11868 87 LSNVLFDDSGFIVLYATMLGVKFVNIVTNQCV 118 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~ 118 (374)
...+.||.+|++|....- .|.++|+.|+++.
T Consensus 227 p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp CEEEEECTTSCEEEEESS-SEEEEETTCSSCC
T ss_pred ceeEEEecCCCEEEEEcc-EEEEEECCCCcee
Confidence 467899999998777665 7888888887763
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=69.27 E-value=23 Score=33.20 Aligned_cols=55 Identities=11% Similarity=0.044 Sum_probs=41.1
Q ss_pred CCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeee-eeeEE
Q psy11868 31 EPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATM-LGVKF 109 (374)
Q Consensus 31 ~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~-~gikv 109 (374)
..|.|||..|+|+++.+.- + . ...+.|+.+|+ .||.+- =-|.|
T Consensus 286 ~~v~viD~~t~~~v~~i~~--------------------------~--------~-p~~ia~spdg~-~l~v~n~~~v~v 329 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPG--------------------------R--------D-ALSMTIDQQRN-LMLTLDGGNVNV 329 (361)
T ss_dssp SEEEEEETTTTEEEEEEEC--------------------------T--------T-CCEEEEETTTT-EEEEECSSCEEE
T ss_pred ceEEEEECCCCcEEEEEec--------------------------C--------C-eeEEEECCCCC-EEEEeCCCeEEE
Confidence 3688899999998877732 0 1 45788999999 456543 24889
Q ss_pred EEeeec--eeEEEe
Q psy11868 110 VNIVTN--QCVRFI 121 (374)
Q Consensus 110 ~n~~t~--~~~~~~ 121 (374)
+|..|+ ++++.+
T Consensus 330 ~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 330 YDISQPEPKLLRTI 343 (361)
T ss_dssp EECSSSSCEEEEEE
T ss_pred EECCCCcceeeEEe
Confidence 999999 988875
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=68.45 E-value=25 Score=33.63 Aligned_cols=35 Identities=9% Similarity=-0.084 Sum_probs=28.3
Q ss_pred cceEEEcCCCceEEEeeee---eeEEEEeeeceeEEE-ec
Q psy11868 87 LSNVLFDDSGFIVLYATML---GVKFVNIVTNQCVRF-IG 122 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~---gikv~n~~t~~~~~~-~g 122 (374)
..++.|+.+|++|...+.- -|-|+| .|+++++. +.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 3488999999999887643 389999 99999877 53
No 190
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=67.85 E-value=9.6 Score=37.07 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=30.7
Q ss_pred cceEEEcCCCceEEEeeeee---eEEEEeeeceeEEEe
Q psy11868 87 LSNVLFDDSGFIVLYATMLG---VKFVNIVTNQCVRFI 121 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~g---ikv~n~~t~~~~~~~ 121 (374)
...+.|+..|+.++|.+-.+ +.|||+.|+++++.+
T Consensus 316 p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 316 SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence 46789999999999988743 899999999999987
No 191
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=67.00 E-value=5.6 Score=35.72 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=24.8
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCC--ceEEEEe
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLS--GKLTRVY 47 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~t--gkl~~~~ 47 (374)
.+++.+.++| +-|.|+.|||||..+ +++++++
T Consensus 16 ~~s~~g~~la--s~s~D~~v~iw~~~~~~~~~~~~l 49 (297)
T 2pm7_B 16 VMDYYGKRMA--TCSSDKTIKIFEVEGETHKLIDTL 49 (297)
T ss_dssp EECTTSSEEE--EEETTSCEEEEEBCSSCBCCCEEE
T ss_pred EECCCCCEEE--EEeCCCEEEEEecCCCCcEEEEEE
Confidence 3788888888 778999999999974 4555544
No 192
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=66.97 E-value=7.6 Score=39.17 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=30.6
Q ss_pred ceEEEcCCCceEEEeeeeeeEEEEeeeceeEEEec
Q psy11868 88 SNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~~g 122 (374)
..+.|..+|+.|.|.+--.|.++++.++++.++.-
T Consensus 117 ~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp SBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEEC
T ss_pred cccEECCCCCEEEEEECCeEEEEECCCCceEEEec
Confidence 46789999999999998789999999999888764
No 193
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=66.74 E-value=4.6 Score=36.77 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=24.8
Q ss_pred eeee-eeccccceeeeeeecCCCCEEEEEeCCce
Q psy11868 10 KLTR-VYDESLARFAELKLSETEPVRVFSFLSGK 42 (374)
Q Consensus 10 ~~~~-~~~~~~~~~~~~~~~~d~~ir~f~~~tgk 42 (374)
.++. .+++.+.++| +-|.|+.|||||..+|+
T Consensus 15 ~V~~v~~s~~g~~la--sgs~D~~v~lwd~~~~~ 46 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLA--TCSSDRSVKIFDVRNGG 46 (316)
T ss_dssp CEEEEEECGGGCEEE--EEETTTEEEEEEEETTE
T ss_pred eEEEeeEcCCCCEEE--EEeCCCeEEEEEecCCC
Confidence 3443 3678888887 77899999999999886
No 194
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=66.73 E-value=14 Score=37.42 Aligned_cols=61 Identities=8% Similarity=0.118 Sum_probs=47.1
Q ss_pred ecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeee--
Q psy11868 27 LSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATM-- 104 (374)
Q Consensus 27 ~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~-- 104 (374)
.+.|+.|++||..+|+..+.++..-. . + .....+.|..+|++|+|.+-
T Consensus 32 ~~~d~~i~~~~~~~g~~~~~~~~~~~-----~-------------------~------~~~~~~~~SpDg~~la~~~~~~ 81 (719)
T 1z68_A 32 QSADNNIVLYNIETGQSYTILSNRTM-----K-------------------S------VNASNYGLSPDRQFVYLESDYS 81 (719)
T ss_dssp ECTTSCEEEEESSSCCEEEEECHHHH-----H-------------------T------TTCSEEEECTTSSEEEEEEEEE
T ss_pred EcCCCCEEEEEcCCCcEEEEEccccc-----c-------------------c------cceeeEEECCCCCeEEEEecCc
Confidence 44799999999999999888764210 0 0 12346789999999999986
Q ss_pred --------eeeEEEEeeecee
Q psy11868 105 --------LGVKFVNIVTNQC 117 (374)
Q Consensus 105 --------~gikv~n~~t~~~ 117 (374)
-.|.+.|+.++++
T Consensus 82 ~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp ECSSSCEEEEEEEEETTTTEE
T ss_pred eeEEeecceEEEEEECCCCcc
Confidence 5689999999988
No 195
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=66.46 E-value=11 Score=38.09 Aligned_cols=73 Identities=10% Similarity=0.073 Sum_probs=50.7
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+-|.+. ++ ++ +.|+.|++||..||+..+.++..- .. ......+.|..
T Consensus 24 ~spdg~-~~-~~-~~dg~i~~~d~~~g~~~~~~~~~~------------~~------------------~~~v~~~~~Sp 70 (723)
T 1xfd_A 24 WISDTE-FI-YR-EQKGTVRLWNVETNTSTVLIEGKK------------IE------------------SLRAIRYEISP 70 (723)
T ss_dssp BSSSSC-BC-CC-CSSSCEEEBCGGGCCCEEEECTTT------------TT------------------TTTCSEEEECT
T ss_pred EcCCCc-EE-EE-eCCCCEEEEECCCCcEEEEecccc------------cc------------------ccccceEEECC
Confidence 344455 33 23 689999999999999887774310 00 01234678999
Q ss_pred CCceEEEeee----------eeeEEEEeeeceeEEE
Q psy11868 95 SGFIVLYATM----------LGVKFVNIVTNQCVRF 120 (374)
Q Consensus 95 s~~~~~y~t~----------~gikv~n~~t~~~~~~ 120 (374)
+|++|+|.+- -.|.+.|+.++++.++
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 106 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSL 106 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEEC
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEec
Confidence 9999999875 4577999999988444
No 196
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=66.06 E-value=99 Score=30.28 Aligned_cols=74 Identities=8% Similarity=0.063 Sum_probs=44.4
Q ss_pred cceEEEcCCCceEEEeee-eeeEEEEee-----eceeEEEecCCC-ccccchhhcccccccccccccchhhhhccCCccc
Q psy11868 87 LSNVLFDDSGFIVLYATM-LGVKFVNIV-----TNQCVRFIGKPE-NLRLLHLSLFQGKVKTRKAATTLEMEAAKNPTLE 159 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~-~gikv~n~~-----t~~~~~~~g~~e-~~r~~~~~l~q~~~~~~~~~~~~~~~~~~n~~l~ 159 (374)
..+++.|+....|.++-= .||-.++.. +.+++..++... .--.-.|+||++...
T Consensus 182 ~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g------------------- 242 (355)
T 3amr_A 182 TEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG------------------- 242 (355)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG-------------------
T ss_pred cceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC-------------------
Confidence 348899977776666532 678888855 456666654221 011234555543211
Q ss_pred ccCCCceEEEeeccCceeEEeecC
Q psy11868 160 AIQPDPTLFCTGFNKNRFYLFSRR 183 (374)
Q Consensus 160 ~~~~dp~l~~ta~~k~rfylfs~~ 183 (374)
.--||++.-..+.|.+|.+.
T Consensus 243 ----~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 243 ----KGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ----CEEEEEEEGGGTEEEEEESS
T ss_pred ----CEEEEEEcCCCCEEEEEECC
Confidence 12478888888899999664
No 197
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=65.22 E-value=13 Score=37.53 Aligned_cols=62 Identities=16% Similarity=0.152 Sum_probs=44.5
Q ss_pred ecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee
Q psy11868 27 LSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG 106 (374)
Q Consensus 27 ~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g 106 (374)
++.|+.|++||..+|++.+..... .....+.|..+|+.|+|..=--
T Consensus 97 ~~~~~~i~~~d~~~~~~~~l~~~~----------------------------------~~~~~~~~SpdG~~la~~~~~~ 142 (706)
T 2z3z_A 97 LFTQGGLVGFDMLARKVTYLFDTN----------------------------------EETASLDFSPVGDRVAYVRNHN 142 (706)
T ss_dssp EEETTEEEEEETTTTEEEEEECCT----------------------------------TCCTTCEECTTSSEEEEEETTE
T ss_pred EEECCEEEEEECCCCceEEccCCc----------------------------------ccccCCcCCCCCCEEEEEECCe
Confidence 345678889999888876554320 1124567999999999976566
Q ss_pred eEEEEeee-----ceeEEEec
Q psy11868 107 VKFVNIVT-----NQCVRFIG 122 (374)
Q Consensus 107 ikv~n~~t-----~~~~~~~g 122 (374)
|.++++.+ ++..++.-
T Consensus 143 i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 143 LYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp EEEEECBCTTSCCCCCEESCS
T ss_pred EEEEecCcccccCCCcEEecc
Confidence 89999998 88877643
No 198
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=65.16 E-value=38 Score=31.18 Aligned_cols=32 Identities=9% Similarity=0.145 Sum_probs=21.6
Q ss_pred cceEEEcCCCceEEEeeee--eeEEEEee-eceeE
Q psy11868 87 LSNVLFDDSGFIVLYATML--GVKFVNIV-TNQCV 118 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~--gikv~n~~-t~~~~ 118 (374)
...+.|+.+|++|+.+..- -|.++++. ++++.
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 3468899999987555431 27777776 66653
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=64.48 E-value=14 Score=33.69 Aligned_cols=71 Identities=20% Similarity=0.099 Sum_probs=48.8
Q ss_pred cccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCC
Q psy11868 17 ESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSG 96 (374)
Q Consensus 17 ~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~ 96 (374)
+.+..++ +.+.|.+|.+||.. ||++..|+-. .....+.++..|
T Consensus 134 ~~G~~lv--~~~~~~~v~~~d~~-G~~~w~~~~~----------------------------------~~~~~~~~~~~g 176 (276)
T 3no2_A 134 KKGNYLV--PLFATSEVREIAPN-GQLLNSVKLS----------------------------------GTPFSSAFLDNG 176 (276)
T ss_dssp TTSCEEE--EETTTTEEEEECTT-SCEEEEEECS----------------------------------SCCCEEEECTTS
T ss_pred CCCCEEE--EecCCCEEEEECCC-CCEEEEEECC----------------------------------CCccceeEcCCC
Confidence 3444444 45578889999987 9999888641 011235667778
Q ss_pred ceEEEeeeee-eEEEEeeeceeEEEecCC
Q psy11868 97 FIVLYATMLG-VKFVNIVTNQCVRFIGKP 124 (374)
Q Consensus 97 ~~~~y~t~~g-ikv~n~~t~~~~~~~g~~ 124 (374)
+.|+-.+--+ |..+|..|++++.-++..
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred CEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 8776555433 788999999999998753
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=64.37 E-value=12 Score=36.83 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=47.3
Q ss_pred CCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee---
Q psy11868 30 TEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG--- 106 (374)
Q Consensus 30 d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g--- 106 (374)
...|-|+|..|+|+++.+.= .. ....+.|+..|+-+||.|--+
T Consensus 310 ~~~V~viD~~t~kv~~~i~v--------------------------g~--------~~~~lavs~D~~~~ly~tn~~~~~ 355 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEM--------------------------GH--------EIDSINVSQDEKPLLYALSTGDKT 355 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEE--------------------------EE--------EECEEEECSSSSCEEEEEETTTTE
T ss_pred CCEEEEEECCCCeEEEEEEC--------------------------CC--------CcceEEECCCCCeEEEEEcCCCCe
Confidence 46799999999999988732 11 234788999999899987643
Q ss_pred eEEEEeeeceeEEEecC
Q psy11868 107 VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 107 ikv~n~~t~~~~~~~g~ 123 (374)
+.|+|..|+++++.+--
T Consensus 356 VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 356 LYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EEEEETTTCCEEEEECC
T ss_pred EEEEECCCCcEEEEecC
Confidence 89999999999998743
No 201
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.29 E-value=4.1 Score=45.35 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=24.8
Q ss_pred eeeeeeecCCCCEEEEEeCCceEEEEeec
Q psy11868 21 RFAELKLSETEPVRVFSFLSGKLTRVYDE 49 (374)
Q Consensus 21 ~~~~~~~~~d~~ir~f~~~tgkl~~~~de 49 (374)
.|+ .|+|-|+++|||+..||+++.++|=
T Consensus 250 ~~l-ftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 250 NVL-VMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp TEE-EEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred cEE-EEEeCCCEEEEEECCCCCeEEeech
Confidence 454 5799999999999999999999995
No 202
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=64.20 E-value=27 Score=37.57 Aligned_cols=86 Identities=13% Similarity=0.149 Sum_probs=50.3
Q ss_pred cceeeeeeccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCc
Q psy11868 8 SGKLTRVYDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSL 87 (374)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~ 87 (374)
.|.++.|- -|++.+ .|+-+.|+.|||||..+++++.. ..+. ++.+.-...-
T Consensus 575 ~~~V~sva-fSpdG~-lAsgs~D~tv~lwd~~~~~~~~~--~~~~-------------------------~~~~gh~~~V 625 (902)
T 2oaj_A 575 KGKTSAIN-NSNIGF-VGIAYAAGSLMLIDRRGPAIIYM--ENIR-------------------------EISGAQSACV 625 (902)
T ss_dssp SCSEEEEE-ECBTSE-EEEEETTSEEEEEETTTTEEEEE--EEGG-------------------------GTCSSCCCCE
T ss_pred CCcEEEEE-ecCCcE-EEEEeCCCcEEEEECCCCeEEEE--eehh-------------------------Hhccccccce
Confidence 44555543 344442 34667899999999999988644 1111 0100000112
Q ss_pred ceEEEc-----CC---CceEEEeeeee-eEEEEe---eeceeEEEec
Q psy11868 88 SNVLFD-----DS---GFIVLYATMLG-VKFVNI---VTNQCVRFIG 122 (374)
Q Consensus 88 ~~~~fd-----~s---~~~~~y~t~~g-ikv~n~---~t~~~~~~~g 122 (374)
..+.|. .. |..|+=+|.-| |++.++ .|+++++.+.
T Consensus 626 ~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~ 672 (902)
T 2oaj_A 626 TCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLM 672 (902)
T ss_dssp EEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEE
T ss_pred EEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEec
Confidence 345666 44 47777777765 788888 7888776653
No 203
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.86 E-value=5.4 Score=42.97 Aligned_cols=29 Identities=21% Similarity=0.407 Sum_probs=25.6
Q ss_pred ceeeeeeecCCCCEEEEEeCCceEEEEeec
Q psy11868 20 ARFAELKLSETEPVRVFSFLSGKLTRVYDE 49 (374)
Q Consensus 20 ~~~~~~~~~~d~~ir~f~~~tgkl~~~~de 49 (374)
+.|. .|+|-|+++|||+..||++..++|-
T Consensus 231 ~~fL-ftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 231 ERYL-IVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTEE-EEEETTCEEEEEETTTTEEEEEEET
T ss_pred CcEE-EEEEcCCeEEEEEcCCCceEEeecc
Confidence 4455 5799999999999999999999997
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=63.36 E-value=12 Score=37.21 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=45.3
Q ss_pred CCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeeee---e
Q psy11868 31 EPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATMLG---V 107 (374)
Q Consensus 31 ~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~g---i 107 (374)
..|-|+|..|+|+++.+.= | .....+.|+..|+.++|-+-.+ +
T Consensus 350 ~~VsVID~~T~kvv~~I~v--------------------g--------------~~P~gia~spDg~~~lyv~n~~s~~V 395 (426)
T 3c75_H 350 RFVVVLNAETGERINKIEL--------------------G--------------HEIDSINVSQDAEPLLYALSAGTQTL 395 (426)
T ss_dssp EEEEEEETTTCCEEEEEEE--------------------E--------------EEECEEEECCSSSCEEEEEETTTTEE
T ss_pred CEEEEEECCCCeEEEEEEC--------------------C--------------CCcCeEEEccCCCEEEEEEcCCCCeE
Confidence 4699999999998887731 0 1246788999999888888754 8
Q ss_pred EEEEeeeceeEEEe
Q psy11868 108 KFVNIVTNQCVRFI 121 (374)
Q Consensus 108 kv~n~~t~~~~~~~ 121 (374)
.|||+.|+++++.+
T Consensus 396 sVID~~t~kvv~tI 409 (426)
T 3c75_H 396 HIYDAATGEELRSV 409 (426)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCCEEEEe
Confidence 89999999999876
No 205
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=60.46 E-value=7.8 Score=39.31 Aligned_cols=34 Identities=6% Similarity=0.040 Sum_probs=29.3
Q ss_pred ceEEEcCCCceEEEeeeeeeEEEEeeeceeEEEe
Q psy11868 88 SNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~~ 121 (374)
..+.|-.+|+.|.|.+---|++.++.++++.++.
T Consensus 113 ~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~ 146 (719)
T 1z68_A 113 QYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQIT 146 (719)
T ss_dssp CCEEECSSTTCEEEEETTEEEEESSTTSCCEECC
T ss_pred ccceECCCCCEEEEEECCeEEEEeCCCCCcEEEe
Confidence 4688999999999998777899999999888765
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=60.35 E-value=16 Score=36.00 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=29.6
Q ss_pred CcceEEEcCCCceEEEeeee---eeEEEEeeeceeEEEe
Q psy11868 86 SLSNVLFDDSGFIVLYATML---GVKFVNIVTNQCVRFI 121 (374)
Q Consensus 86 ~~~~~~fd~s~~~~~y~t~~---gikv~n~~t~~~~~~~ 121 (374)
....+.|+..|++|.-.... .|.|||+.|+++++.+
T Consensus 138 ~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 138 YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 34688999999997766542 4899999999999987
No 207
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=59.90 E-value=24 Score=32.17 Aligned_cols=85 Identities=15% Similarity=0.057 Sum_probs=46.9
Q ss_pred eecc-ccceeeeeeec-CCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEE
Q psy11868 14 VYDE-SLARFAELKLS-ETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVL 91 (374)
Q Consensus 14 ~~~~-~~~~~~~~~~~-~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~ 91 (374)
.+|+ .+.-++ +-+ .+.+|++|+ .+|++++.+...- .. + .+.. ........+.
T Consensus 149 a~~~~~g~lyv--~d~~~~~~I~~~~-~~g~~~~~~~~~g----------~~-~-------~~~~-----~~~~~p~gia 202 (329)
T 3fvz_A 149 AVEPSTGAVFV--SDGYCNSRIVQFS-PSGKFVTQWGEES----------SG-S-------SPRP-----GQFSVPHSLA 202 (329)
T ss_dssp EECTTTCCEEE--EECSSCCEEEEEC-TTSCEEEEECEEC----------CS-S-------SCCT-----TEESCEEEEE
T ss_pred EEeCCCCeEEE--EeCCCCCeEEEEc-CCCCEEEEeccCC----------CC-C-------CCCC-----cccCCCcEEE
Confidence 3455 444444 333 467788887 7788777664310 00 0 0000 0111235789
Q ss_pred EcCCCceEEEeeee--eeEEEEeeeceeEEEecCC
Q psy11868 92 FDDSGFIVLYATML--GVKFVNIVTNQCVRFIGKP 124 (374)
Q Consensus 92 fd~s~~~~~y~t~~--gikv~n~~t~~~~~~~g~~ 124 (374)
||.++..|+....- -|++++..|+++++.++..
T Consensus 203 ~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 203 LVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred EECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 99984444333322 2888898889998888643
No 208
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=58.94 E-value=63 Score=28.89 Aligned_cols=34 Identities=6% Similarity=0.091 Sum_probs=23.3
Q ss_pred cceEEEcCCCceEEEeeee--eeEEE--EeeeceeEEE
Q psy11868 87 LSNVLFDDSGFIVLYATML--GVKFV--NIVTNQCVRF 120 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~--gikv~--n~~t~~~~~~ 120 (374)
...+.|+.+|++|+....- .|.++ |..|+++.++
T Consensus 288 ~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 288 PRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp CCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred cCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEec
Confidence 3578899999988877643 36666 4456666554
No 209
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=58.79 E-value=19 Score=31.33 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=54.5
Q ss_pred eceeEEEEec-ccchHHHHHHHhhhc----CCccCCcEEEEEEcCeEEeeCCCCCCCCCCccccCCCCcccccCCCCCCC
Q psy11868 228 SMGDIHLQLF-KECAKTVENFCVHSK----NNYYNGHIFHRVIKGFMIQTGDPTGTGTGGQSIWGGEFKDEFKSHLKHDR 302 (374)
Q Consensus 228 t~G~I~IeLf-d~aPktveNF~~L~k----~GyY~gt~FhRVi~~f~IQgGDp~g~GtgG~si~G~~f~dE~~~~LkH~r 302 (374)
.-..++++|+ +.||+||+.|..+.= -..|.+-.++. .|-. -..+ |. .-....
T Consensus 37 ~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~E~y~~-lp~~-------------------l~~~-en--~~~~~~ 93 (153)
T 2nnz_A 37 ESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYFT-TQVA-------------------VEKE-EN--SKDVVE 93 (153)
T ss_dssp TTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETTEEEEC-CSCC-------------------CCCS-SC--CBCCCC
T ss_pred CCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCCcEEEE-CCCC-------------------CCCC-CC--CcccCC
Confidence 3466899999 779999999988641 01122111110 0100 0011 21 112345
Q ss_pred cceEeecccCCCCCcceEEEEcCCCCCCCC------CCeEEEEEEeCHHHHHHHh
Q psy11868 303 PYTVSMANAGPNTNGSQFFITLTPTPWLDN------KHTVFGRVTKGMEVVQNIS 351 (374)
Q Consensus 303 ~G~VSman~gpntngSQFFITl~~~p~LDg------k~tVFGrVieGmdVL~~Ie 351 (374)
+|-|+.-..+. .+-|-.++.|...+ .-.+||+|++|++.|.++.
T Consensus 94 ~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 94 LGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp TTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred CCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 67777755443 37777787754332 3578999999988776543
No 210
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=58.64 E-value=40 Score=30.25 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=17.9
Q ss_pred ceEEEcCCCceEEEeeeee--eEEEEee
Q psy11868 88 SNVLFDDSGFIVLYATMLG--VKFVNIV 113 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~g--ikv~n~~ 113 (374)
..+.|+.+|++|+.....+ |.++++.
T Consensus 190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 3589999999877754332 5566655
No 211
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=58.17 E-value=19 Score=37.23 Aligned_cols=71 Identities=14% Similarity=0.158 Sum_probs=48.1
Q ss_pred CCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee----
Q psy11868 30 TEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML---- 105 (374)
Q Consensus 30 d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~---- 105 (374)
|+.|++||..||+....++-.- +. .-......+.|..+|++|+|.+--
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~------------~~----------------~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENST------------FD----------------EFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTT------------TT----------------TCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred CCcEEEEECCCCceEEEEechh------------hh----------------hhcccccceEECCCCCEEEEEECCeeeE
Confidence 9999999999999876654310 00 000111246789999999998852
Q ss_pred ------eeEEEEeeeceeEEEecCCCccc
Q psy11868 106 ------GVKFVNIVTNQCVRFIGKPENLR 128 (374)
Q Consensus 106 ------gikv~n~~t~~~~~~~g~~e~~r 128 (374)
-+.++|+.|+++.++.+.....+
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~ 115 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNNTQ 115 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTTEE
T ss_pred EEccceEEEEEECCCCcEEEcccCCCcce
Confidence 34589999999988776544333
No 212
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=57.52 E-value=8.6 Score=42.13 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=24.6
Q ss_pred eeeeeeecCCCCEEEEEeCCceEEEEeec
Q psy11868 21 RFAELKLSETEPVRVFSFLSGKLTRVYDE 49 (374)
Q Consensus 21 ~~~~~~~~~d~~ir~f~~~tgkl~~~~de 49 (374)
.|+ .|+|-|+++|||+..||+++.++|=
T Consensus 248 ~~l-ftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 248 NVL-VMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TEE-EEEETTCEEEEEETTTTEEEEEEEC
T ss_pred cEE-EEEECCCEEEEEECCCCCeEeeecc
Confidence 344 4799999999999999999999985
No 213
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=55.92 E-value=17 Score=34.55 Aligned_cols=26 Identities=4% Similarity=0.218 Sum_probs=19.1
Q ss_pred ecc-ccceeeeeeecCCCCEEEEEeCCce
Q psy11868 15 YDE-SLARFAELKLSETEPVRVFSFLSGK 42 (374)
Q Consensus 15 ~~~-~~~~~~~~~~~~d~~ir~f~~~tgk 42 (374)
+.| .+..|| +.+.|++|+|||+.+++
T Consensus 239 ~~p~~~~~l~--s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 239 WHLLHESLFG--SVADDQKLMIWDTRNNN 265 (430)
T ss_dssp ECSSCTTEEE--EEETTSEEEEEETTCSC
T ss_pred EeCCCCCEEE--EEeCCCeEEEEECCCCC
Confidence 345 344555 67789999999999873
No 214
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=54.78 E-value=38 Score=29.55 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=19.9
Q ss_pred ceEEEcCCCceEEEeeee--eeEEEEeeeceeEEEe
Q psy11868 88 SNVLFDDSGFIVLYATML--GVKFVNIVTNQCVRFI 121 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~--gikv~n~~t~~~~~~~ 121 (374)
..+.||.+|++++=...- +|.+++. +++.++.+
T Consensus 210 ~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~ 244 (286)
T 1q7f_A 210 IGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISAL 244 (286)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEE
T ss_pred cEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEE
Confidence 468899999865544332 5666663 44444443
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=54.44 E-value=33 Score=30.76 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=23.9
Q ss_pred cceEEEcCCCceEEEeeeee--eEEEEeeeceeEEEe
Q psy11868 87 LSNVLFDDSGFIVLYATMLG--VKFVNIVTNQCVRFI 121 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~g--ikv~n~~t~~~~~~~ 121 (374)
...+.+|..|++. .++.-| |.++|..|+++++.+
T Consensus 201 p~g~~~d~~G~lw-va~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 201 PDGMCIDAEGKLW-VACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEEEEEBTTSCEE-EEEETTTEEEEECTTTCCEEEEE
T ss_pred CCeeEECCCCCEE-EEEcCCCEEEEEcCCCceEEEEE
Confidence 3578999999743 333334 788888888877766
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=53.53 E-value=36 Score=32.81 Aligned_cols=71 Identities=15% Similarity=-0.039 Sum_probs=44.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD 94 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~ 94 (374)
+|+.+.-|+ +-..+++||+||..+|++...... .... . +.||.
T Consensus 138 ~d~~g~lyv--~d~~~~~I~~id~~~g~~~~~~~~---------------------------------~~~~-~-ia~~~ 180 (409)
T 3hrp_A 138 AVGNNTVLA--YQRDDPRVRLISVDDNKVTTVHPG---------------------------------FKGG-K-PAVTK 180 (409)
T ss_dssp ECSTTEEEE--EETTTTEEEEEETTTTEEEEEEET---------------------------------CCBC-B-CEECT
T ss_pred EeCCCCEEE--EecCCCcEEEEECCCCEEEEeecc---------------------------------CCCC-c-eeEec
Confidence 466665454 333567888888888887755422 0011 2 88999
Q ss_pred CCceEEEeeee---eeEEEEeeeceeEEEec
Q psy11868 95 SGFIVLYATML---GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 95 s~~~~~y~t~~---gikv~n~~t~~~~~~~g 122 (374)
+|++|+....- .|.+++..++...+.+|
T Consensus 181 ~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 181 DKQRVYSIGWEGTHTVYVYMKASGWAPTRIG 211 (409)
T ss_dssp TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEE
T ss_pred CCCcEEEEecCCCceEEEEEcCCCceeEEee
Confidence 99977666653 36677766666555553
No 217
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=52.92 E-value=27 Score=34.46 Aligned_cols=34 Identities=6% Similarity=-0.150 Sum_probs=25.3
Q ss_pred ceEEEcCCCceEEEeeeee---eEEEEeeeceeEEEec
Q psy11868 88 SNVLFDDSGFIVLYATMLG---VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~g---ikv~n~~t~~~~~~~g 122 (374)
.++.|..+|++|....--| |.++|+.|+++. ++.
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 4678999999888554444 888898888887 443
No 218
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=50.49 E-value=60 Score=28.52 Aligned_cols=31 Identities=13% Similarity=0.066 Sum_probs=22.0
Q ss_pred cceEEEc-CCCceEEEeeeeeeEEEEeeecee
Q psy11868 87 LSNVLFD-DSGFIVLYATMLGVKFVNIVTNQC 117 (374)
Q Consensus 87 ~~~~~fd-~s~~~~~y~t~~gikv~n~~t~~~ 117 (374)
..++.|+ ..|+.|.-.|.=|+-.+++.|.++
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGL 289 (296)
T ss_dssp CCEEEEESTTSCEEEEEETTEEEEEECSCCBC
T ss_pred ceeEEEECCCCCEEEEEcCCeEEEEEcccccc
Confidence 5688995 677777777766777777666554
No 219
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=49.71 E-value=47 Score=33.97 Aligned_cols=35 Identities=3% Similarity=-0.145 Sum_probs=27.5
Q ss_pred ceEEEc----CCCceEEEeeee--eeEEEEeeeceeEEEec
Q psy11868 88 SNVLFD----DSGFIVLYATML--GVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 88 ~~~~fd----~s~~~~~y~t~~--gikv~n~~t~~~~~~~g 122 (374)
.++.|+ .+|++++-.+.. .+.|+|..|.++++++-
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 578898 589988877665 46788999999988763
No 220
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=48.50 E-value=60 Score=28.88 Aligned_cols=16 Identities=6% Similarity=0.167 Sum_probs=11.7
Q ss_pred ceEEEcCCCceEEEee
Q psy11868 88 SNVLFDDSGFIVLYAT 103 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t 103 (374)
..+.|...|+.|+|.+
T Consensus 107 ~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVG 122 (347)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred cceeECCCCCEEEEEE
Confidence 3567777888888876
No 221
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=48.43 E-value=81 Score=28.42 Aligned_cols=69 Identities=12% Similarity=0.177 Sum_probs=38.8
Q ss_pred eeccccceeeeeeec-CCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEE
Q psy11868 14 VYDESLARFAELKLS-ETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLF 92 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~-~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~f 92 (374)
.++|.+...+ +.+ .|.+|++||..+|++...-.-.. ++ ........+.|
T Consensus 217 ~~spdg~~l~--v~~~~~~~v~v~~~~~g~~~~~~~~~~------------~~----------------~~~~~~~~i~~ 266 (361)
T 3scy_A 217 IFNSDGKFAY--LINEIGGTVIAFRYADGMLDEIQTVAA------------DT----------------VNAQGSGDIHL 266 (361)
T ss_dssp EECTTSSEEE--EEETTTCEEEEEEEETTEEEEEEEEES------------CS----------------SCCCCEEEEEE
T ss_pred EEcCCCCEEE--EEcCCCCeEEEEEecCCceEEeEEEec------------CC----------------CCCCCcccEEE
Confidence 3556555444 233 57889999998887743321100 00 00011247889
Q ss_pred cCCCceEEEeeee---eeEEEEe
Q psy11868 93 DDSGFIVLYATML---GVKFVNI 112 (374)
Q Consensus 93 d~s~~~~~y~t~~---gikv~n~ 112 (374)
+.+|++|.....- -|.|.++
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEE
T ss_pred CCCCCEEEEECCCCCCEEEEEEE
Confidence 9999987655433 2666665
No 222
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=47.44 E-value=47 Score=30.06 Aligned_cols=35 Identities=9% Similarity=-0.022 Sum_probs=27.7
Q ss_pred eEEEcCCCceEEEeeee-eeEEEEeeeceeEEEecC
Q psy11868 89 NVLFDDSGFIVLYATML-GVKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 89 ~~~fd~s~~~~~y~t~~-gikv~n~~t~~~~~~~g~ 123 (374)
.+.|...|+.|+|.+.- .|.++|+.|++..+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 45799999999998743 588999999988776543
No 223
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=45.93 E-value=75 Score=27.54 Aligned_cols=35 Identities=29% Similarity=0.324 Sum_probs=21.0
Q ss_pred cceEEEcCCCceEEEee-eeeeEEEEeeeceeEEEec
Q psy11868 87 LSNVLFDDSGFIVLYAT-MLGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t-~~gikv~n~~t~~~~~~~g 122 (374)
...+.||.+|++++=.+ --+|.+++. +++.++.++
T Consensus 166 p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 201 (286)
T 1q7f_A 166 PNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIG 201 (286)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEES
T ss_pred cEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEc
Confidence 35688999998444322 125777776 445555444
No 224
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=45.13 E-value=49 Score=29.93 Aligned_cols=31 Identities=6% Similarity=0.022 Sum_probs=19.4
Q ss_pred ccccceeeeeeecCCCCEEEEEeCCceEEEEee
Q psy11868 16 DESLARFAELKLSETEPVRVFSFLSGKLTRVYD 48 (374)
Q Consensus 16 ~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~d 48 (374)
.|.+.++| ..+.|+.|+++|..||+..+++.
T Consensus 89 spdg~~l~--~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 89 SPDDDALF--YVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CTTSSEEE--EEETTTEEEEEETTTCCEEEEEE
T ss_pred cCCCCEEE--EEeCCCeEEEEECCCCcceeeee
Confidence 33444444 33356678888888888776653
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=44.83 E-value=47 Score=29.77 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=22.3
Q ss_pred ceEEEcCCCceEE----Eeee--------------eeeEEEEeeeceeEEE
Q psy11868 88 SNVLFDDSGFIVL----YATM--------------LGVKFVNIVTNQCVRF 120 (374)
Q Consensus 88 ~~~~fd~s~~~~~----y~t~--------------~gikv~n~~t~~~~~~ 120 (374)
..+.+|..|++++ |+++ -+|-.++..++++.++
T Consensus 134 ~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 134 NDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp CCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred CCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 4589999999777 4554 3566666666665554
No 226
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=44.34 E-value=79 Score=28.16 Aligned_cols=33 Identities=18% Similarity=0.054 Sum_probs=25.3
Q ss_pred ceEEEcCCCceEEEeeeeeeEEEEeeeceeEEEe
Q psy11868 88 SNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~~ 121 (374)
..+.||..|+ |+.++--||.++|..|+++..+.
T Consensus 57 ~~i~~~~dG~-l~v~~~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 57 SSVALRQSGG-YVATIGTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp EEEEEBTTSS-EEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCC-EEEEECCeEEEEECCCCcEEEEE
Confidence 4678999999 45556678999998888876554
No 227
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=44.18 E-value=22 Score=31.75 Aligned_cols=22 Identities=18% Similarity=0.107 Sum_probs=18.1
Q ss_pred cceeeeeeecCCCCEEEEEeCCce
Q psy11868 19 LARFAELKLSETEPVRVFSFLSGK 42 (374)
Q Consensus 19 ~~~~~~~~~~~d~~ir~f~~~tgk 42 (374)
+..+| +.|.|++|||||..+|+
T Consensus 67 g~~l~--s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 67 GTILA--SCSYDGKVMIWKEENGR 88 (297)
T ss_dssp CSEEE--EEETTTEEEEEEBSSSC
T ss_pred CCEEE--EEcCCCEEEEEEcCCCc
Confidence 55665 77799999999999885
No 228
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=43.98 E-value=60 Score=33.18 Aligned_cols=67 Identities=13% Similarity=0.160 Sum_probs=47.9
Q ss_pred eeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEE
Q psy11868 22 FAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLY 101 (374)
Q Consensus 22 ~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y 101 (374)
.+.++...|..|.|+|..|+|++..++= | .....+.|+.+|+++.-
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~--------------------g--------------~~p~~v~~SpDGr~lyv 213 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDT--------------------G--------------YAVHISRLSASGRYLFV 213 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEEC--------------------S--------------SCEEEEEECTTSCEEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeC--------------------C--------------CCccceEECCCCCEEEE
Confidence 3334566899999999999999987732 0 01126789999998665
Q ss_pred eeee-eeEEEEee--eceeEEEec
Q psy11868 102 ATML-GVKFVNIV--TNQCVRFIG 122 (374)
Q Consensus 102 ~t~~-gikv~n~~--t~~~~~~~g 122 (374)
++.- .|.++|+. |+++++-+-
T Consensus 214 ~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 214 IGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp EETTSEEEEEETTSSSCCEEEEEE
T ss_pred EcCCCeEEEEECCCCCCcEeEEEe
Confidence 5543 48889985 888877663
No 229
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=43.71 E-value=42 Score=30.30 Aligned_cols=33 Identities=9% Similarity=-0.057 Sum_probs=27.5
Q ss_pred EEEcCCCceEEEeeeee-eEEEEeeeceeEEEec
Q psy11868 90 VLFDDSGFIVLYATMLG-VKFVNIVTNQCVRFIG 122 (374)
Q Consensus 90 ~~fd~s~~~~~y~t~~g-ikv~n~~t~~~~~~~g 122 (374)
+.|..+|+.|+|.+.-+ |.++|+.+++..++..
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe
Confidence 67899999999988665 8999999998877765
No 230
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=41.60 E-value=77 Score=32.28 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=23.0
Q ss_pred ceEEEcCCCceEEEeeeee-----------------eEEEEeeece
Q psy11868 88 SNVLFDDSGFIVLYATMLG-----------------VKFVNIVTNQ 116 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~g-----------------ikv~n~~t~~ 116 (374)
..+.|-.+|+.|+|.+.-+ |.+.++.|++
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 4678989999999987653 7888888876
No 231
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=39.40 E-value=66 Score=29.33 Aligned_cols=33 Identities=12% Similarity=-0.031 Sum_probs=25.7
Q ss_pred ceEEEcCCCceEEEeeeeeeEEEEeeeceeEEEe
Q psy11868 88 SNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~~ 121 (374)
..+.||..|++++ ++.-||.++|..++++.++.
T Consensus 93 ~~i~~~~dg~l~v-~~~~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 93 SALAKISDSKQLI-ASDDGLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTEEEE-EETTEEEEEETTTCCEEEEE
T ss_pred eEEEEeCCCeEEE-EECCCEEEEECCCCcEEEEe
Confidence 4677999998766 45679999999888876654
No 232
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=39.32 E-value=69 Score=29.40 Aligned_cols=16 Identities=6% Similarity=0.034 Sum_probs=11.3
Q ss_pred CEEEEEeC-CceEEEEe
Q psy11868 32 PVRVFSFL-SGKLTRVY 47 (374)
Q Consensus 32 ~ir~f~~~-tgkl~~~~ 47 (374)
.|++|+.. +|++.+..
T Consensus 61 ~v~~~~~~~~g~~~~~~ 77 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEA 77 (365)
T ss_dssp EEEEEEEEETTEEEEEE
T ss_pred eEEEEEECCCCCEEEee
Confidence 57888886 88876543
No 233
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=38.90 E-value=71 Score=28.34 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=19.0
Q ss_pred cceEEEcCCCceEEEeee--------eeeEEEEeeeceeEE
Q psy11868 87 LSNVLFDDSGFIVLYATM--------LGVKFVNIVTNQCVR 119 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~--------~gikv~n~~t~~~~~ 119 (374)
...+.||..|++++ .+. -+|-.++..++++.+
T Consensus 137 ~~~i~~d~~g~l~v-~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (333)
T 2dg1_A 137 IDDMVFDSKGGFYF-TDFRGYSTNPLGGVYYVSPDFRTVTP 176 (333)
T ss_dssp EEEEEECTTSCEEE-EECCCBTTBCCEEEEEECTTSCCEEE
T ss_pred ccceEECCCCCEEE-EeccccccCCCceEEEEeCCCCEEEE
Confidence 34678999998655 443 345555554444443
No 234
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=37.03 E-value=47 Score=29.95 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=25.1
Q ss_pred ceEEEcCCCceEEEeeee------eeEEEEeeeceeEEEe
Q psy11868 88 SNVLFDDSGFIVLYATML------GVKFVNIVTNQCVRFI 121 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~------gikv~n~~t~~~~~~~ 121 (374)
..+.|..+|+.|+|.+.- .|.++|+.+++..++.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM 280 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee
Confidence 356899999999998764 2777887777765543
No 235
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=33.63 E-value=55 Score=34.27 Aligned_cols=72 Identities=13% Similarity=0.078 Sum_probs=45.2
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceE-------EEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccC
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKL-------TRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLS 86 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl-------~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~ 86 (374)
.+.|.++..| +-+.|++|||||..+|++ ++++.--.+ | + ...
T Consensus 136 afSPDG~~LA--sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~-----------------g-----------h-~~~ 184 (588)
T 2j04_A 136 EWNPIESSIV--VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA-----------------G-----------S-KDW 184 (588)
T ss_dssp EECSSSSCEE--EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT-----------------T-----------C-CCC
T ss_pred EEcCCCCEEE--EEcCCCEEEEEECCCCccccccceeeeeeecccc-----------------c-----------c-ccc
Confidence 3456666666 667899999999999974 455431000 0 0 011
Q ss_pred cceEEEcCCCceEEEeeeeeeEEEEeeecee
Q psy11868 87 LSNVLFDDSGFIVLYATMLGVKFVNIVTNQC 117 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~gikv~n~~t~~~ 117 (374)
-..+.|-..| ++..+.=-.|++.++.++++
T Consensus 185 V~sVawSPdg-Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 185 VTHIVWYEDV-LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp EEEEEEETTE-EEEEETTCCEEEECCCSSSS
T ss_pred EEEEEEcCCc-EEEEeCCCeEEEEECCCCcc
Confidence 2356777777 66665556678888777773
No 236
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.08 E-value=82 Score=30.98 Aligned_cols=64 Identities=8% Similarity=-0.012 Sum_probs=44.7
Q ss_pred CEEEEEeCCc--eEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcC------CCceEEEee
Q psy11868 32 PVRVFSFLSG--KLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDD------SGFIVLYAT 103 (374)
Q Consensus 32 ~ir~f~~~tg--kl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~------s~~~~~y~t 103 (374)
||=+||..|+ |++|+|+= -.++-++. ....++.+|. .++=.+|=|
T Consensus 124 kLv~~DL~t~~~~li~~y~~--------------------------p~~~~~~~-S~l~di~VD~~~~~~~c~~~~aYIt 176 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYF--------------------------PTRLVEKP-TYFGGFAVDVANPKGDCSETFVYIT 176 (381)
T ss_dssp EEEEEESSSTTCCEEEEEEC--------------------------CGGGCCCG-GGEEEEEEEESCTTTTSCSEEEEEE
T ss_pred eEEEEECCCCCceeEEEEEC--------------------------CHHhcccC-CccceEEEecccCCCCCCccEEEEE
Confidence 7899999999 99999942 11111111 2356888882 235566654
Q ss_pred e---eeeEEEEeeeceeEEEec
Q psy11868 104 M---LGVKFVNIVTNQCVRFIG 122 (374)
Q Consensus 104 ~---~gikv~n~~t~~~~~~~g 122 (374)
= -||=|+|+.+|+--|++-
T Consensus 177 D~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 177 NFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCcEEEEECCCCcEEEEcc
Confidence 3 589999999999999983
No 237
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=31.98 E-value=76 Score=27.65 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=45.0
Q ss_pred eeeccccceeeeee-------ecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhccccccc
Q psy11868 13 RVYDESLARFAELK-------LSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQL 85 (374)
Q Consensus 13 ~~~~~~~~~~~~~~-------~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~ 85 (374)
-.+|+.+..++ + -+.++.|.+||..+|++......+. . ....
T Consensus 23 ~~~~~~g~l~~--~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~----------------------------~-~~~~ 71 (314)
T 1pjx_A 23 PVFDKNGDFYI--VAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV----------------------------N-GYGG 71 (314)
T ss_dssp EEECTTSCEEE--EETTCEETTEECCEEEEECTTTCCEEEEECCEE----------------------------T-TEEC
T ss_pred ceECCCCCEEE--EEeccccCCCCCCEEEEEeCCCCcEEEEEeccc----------------------------C-CCCC
Confidence 45676666555 2 2357889999988998754321000 0 0001
Q ss_pred CcceEEEcCC-CceEEEeeeeeeEEEEeeeceeEEE
Q psy11868 86 SLSNVLFDDS-GFIVLYATMLGVKFVNIVTNQCVRF 120 (374)
Q Consensus 86 ~~~~~~fd~s-~~~~~y~t~~gikv~n~~t~~~~~~ 120 (374)
....+.+|.. |+.++-.+--||.++|.. +++.++
T Consensus 72 ~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 72 IPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEI 106 (314)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEEC
T ss_pred CCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEE
Confidence 2346789998 775554433478888877 766544
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=31.86 E-value=1.8e+02 Score=25.81 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=23.4
Q ss_pred cceEEEcCCCceEEEeeeeeeEEEEeeeceeEEEe
Q psy11868 87 LSNVLFDDSGFIVLYATMLGVKFVNIVTNQCVRFI 121 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~~gikv~n~~t~~~~~~~ 121 (374)
..++.+|..|+ |..++.-||.++|. +++.+..+
T Consensus 241 pdgi~~d~~G~-lwv~~~~gv~~~~~-~g~~~~~~ 273 (305)
T 3dr2_A 241 PDGFCVDRGGW-LWSSSGTGVCVFDS-DGQLLGHI 273 (305)
T ss_dssp CCSEEECTTSC-EEECCSSEEEEECT-TSCEEEEE
T ss_pred CCeEEECCCCC-EEEecCCcEEEECC-CCCEEEEE
Confidence 45789999999 44555678888887 45555444
No 239
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=30.89 E-value=43 Score=30.14 Aligned_cols=33 Identities=9% Similarity=0.087 Sum_probs=22.5
Q ss_pred eccccceeeeeeecCCCCEEEEEeC-Cce--EEEEeec
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFL-SGK--LTRVYDE 49 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~-tgk--l~~~~de 49 (374)
+.|.+..+| +-+.|++||||+.. .|+ .++.+.|
T Consensus 270 ~sp~g~~la--s~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 270 WSITANILA--VSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp ECTTTCCEE--EEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred EcCCCCEEE--EEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 456677776 67799999999986 554 3444444
No 240
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=30.81 E-value=71 Score=30.09 Aligned_cols=21 Identities=14% Similarity=0.422 Sum_probs=17.2
Q ss_pred CceEEEeeccCceeEEeecCC
Q psy11868 164 DPTLFCTGFNKNRFYLFSRRE 184 (374)
Q Consensus 164 dp~l~~ta~~k~rfylfs~~~ 184 (374)
++.+|+++.....+++|.-+.
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEeCCCeEEEEECCC
Confidence 567888888889999997764
No 241
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=30.68 E-value=1.6e+02 Score=25.11 Aligned_cols=31 Identities=0% Similarity=-0.039 Sum_probs=18.7
Q ss_pred ceEEEcCCCceEEEee-eeeeEEEEeeeceeEE
Q psy11868 88 SNVLFDDSGFIVLYAT-MLGVKFVNIVTNQCVR 119 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t-~~gikv~n~~t~~~~~ 119 (374)
..+.+|..|++++-.. --+|.+++. ++++..
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~ 217 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITT-SGEITE 217 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred eeEEECCCCCEEEEccCCceEEEECC-CCcEEE
Confidence 4688999998433221 235677776 655433
No 242
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=29.19 E-value=1.1e+02 Score=27.11 Aligned_cols=36 Identities=6% Similarity=0.055 Sum_probs=28.3
Q ss_pred ceEEEcCCCceEEEeeeee------eEEEEeeeceeEEEecC
Q psy11868 88 SNVLFDDSGFIVLYATMLG------VKFVNIVTNQCVRFIGK 123 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~g------ikv~n~~t~~~~~~~g~ 123 (374)
..+.|..+|+.|+|.+.-+ |.++++.+++..++...
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~ 103 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA 103 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC
Confidence 3568999999999987654 88889888888777643
No 243
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=29.04 E-value=56 Score=32.50 Aligned_cols=36 Identities=8% Similarity=0.155 Sum_probs=28.2
Q ss_pred ceEEEcCCCceEEEeeee---------eeEEEEee-ec---eeEEEecC
Q psy11868 88 SNVLFDDSGFIVLYATML---------GVKFVNIV-TN---QCVRFIGK 123 (374)
Q Consensus 88 ~~~~fd~s~~~~~y~t~~---------gikv~n~~-t~---~~~~~~g~ 123 (374)
..+.|..+|+.|+|.+.- -|.++++. ++ +..++.+.
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 457899999999998854 48999998 57 67777654
No 244
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=28.99 E-value=86 Score=33.70 Aligned_cols=70 Identities=14% Similarity=0.085 Sum_probs=50.1
Q ss_pred ccceeeeeeecCCCCEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCc
Q psy11868 18 SLARFAELKLSETEPVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGF 97 (374)
Q Consensus 18 ~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~ 97 (374)
|+++.| ++.++.|++|+..+|+..+.... ...-.++.|-.+|+
T Consensus 23 S~~~ia---f~~~~~l~~~~~~gg~~~~lt~~----------------------------------~~~v~~~~~SPDG~ 65 (1045)
T 1k32_A 23 HGDRII---FVCCDDLWEHDLKSGSTRKIVSN----------------------------------LGVINNARFFPDGR 65 (1045)
T ss_dssp ETTEEE---EEETTEEEEEETTTCCEEEEECS----------------------------------SSEEEEEEECTTSS
T ss_pred eCCEEE---EEECCcEEEEECCCCcEEEeeeC----------------------------------CCcccCeEECCCCC
Confidence 466665 44557999999999987654422 01224678999999
Q ss_pred eEEEeeee-------eeEEEEeeeceeEEEecCC
Q psy11868 98 IVLYATML-------GVKFVNIVTNQCVRFIGKP 124 (374)
Q Consensus 98 ~~~y~t~~-------gikv~n~~t~~~~~~~g~~ 124 (374)
+|.|.+.- -|.++++.+++..++.+-.
T Consensus 66 ~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~ 99 (1045)
T 1k32_A 66 KIAIRVMRGSSLNTADLYFYNGENGEIKRITYFS 99 (1045)
T ss_dssp EEEEEEEESTTCCEEEEEEEETTTTEEEECCCCC
T ss_pred EEEEEEeeccCCCCCeEEEEECCCCCeEEcccCC
Confidence 99998765 4889999888876665543
No 245
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=28.08 E-value=2e+02 Score=24.29 Aligned_cols=20 Identities=15% Similarity=0.260 Sum_probs=15.2
Q ss_pred eEEEeeccCceeEEeecCCC
Q psy11868 166 TLFCTGFNKNRFYLFSRREP 185 (374)
Q Consensus 166 ~l~~ta~~k~rfylfs~~~p 185 (374)
.|+++....++.++|...++
T Consensus 246 ~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CEEEEEGGGTEEEEECCCGG
T ss_pred CEEEEECCCCEEEEEcCCCc
Confidence 47777888899999976543
No 246
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=27.98 E-value=1.8e+02 Score=24.70 Aligned_cols=33 Identities=6% Similarity=0.062 Sum_probs=20.3
Q ss_pred cceEEEcCCCceEEEeee-eeeEEEEeeeceeEEE
Q psy11868 87 LSNVLFDDSGFIVLYATM-LGVKFVNIVTNQCVRF 120 (374)
Q Consensus 87 ~~~~~fd~s~~~~~y~t~-~gikv~n~~t~~~~~~ 120 (374)
...+.+|..|+.++-.+. -+|.+++. ++++.++
T Consensus 143 ~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 143 PSFITLGSDNALWFTENQNNAIGRITE-SGDITEF 176 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE
T ss_pred CceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe
Confidence 356789999876553321 35677776 6655443
No 247
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=25.37 E-value=45 Score=32.27 Aligned_cols=30 Identities=10% Similarity=-0.015 Sum_probs=24.0
Q ss_pred eccccceeeeeeecCCCCEEEEEeCCceEEEEe
Q psy11868 15 YDESLARFAELKLSETEPVRVFSFLSGKLTRVY 47 (374)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~ 47 (374)
+.|.+.++| +-+.|++|+|||.. |+..+.+
T Consensus 200 wspdg~~la--sgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 200 WSPKGKQLA--VGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp ECTTSSCEE--EEETTSCEEEECTT-CCEEEEE
T ss_pred EcCCCCEEE--EEcCCCcEEEEccC-Ccccccc
Confidence 567777777 66689999999998 7777665
No 248
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=23.52 E-value=37 Score=34.10 Aligned_cols=32 Identities=9% Similarity=0.076 Sum_probs=24.1
Q ss_pred eeccccceeeeeeecCCCCEEEEEeCCceEEEEe
Q psy11868 14 VYDESLARFAELKLSETEPVRVFSFLSGKLTRVY 47 (374)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~ir~f~~~tgkl~~~~ 47 (374)
.+.|.+..+| +-+.|+.|||||..+|++.+++
T Consensus 362 ~fsp~~~~l~--s~~~d~tv~lwd~~~~~~~~~l 393 (524)
T 2j04_B 362 VYCPQIYSYI--YSDGASSLRAVPSRAAFAVHPL 393 (524)
T ss_dssp EEETTTTEEE--EECSSSEEEEEETTCTTCCEEE
T ss_pred EeCCCcCeEE--EeCCCCcEEEEECcccccceee
Confidence 4556666665 5668999999999998876554
No 249
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=23.32 E-value=2.2e+02 Score=27.31 Aligned_cols=55 Identities=16% Similarity=-0.090 Sum_probs=43.7
Q ss_pred CEEEEEeCCceEEEEeechhHHHHHHHHhccCCCccchhhhhhhhhhcccccccCcceEEEcCCCceEEEeeee------
Q psy11868 32 PVRVFSFLSGKLTRVYDESLARFADLQKAKQQLPNMEFGRRMATERDLEKSEQLSLSNVLFDDSGFIVLYATML------ 105 (374)
Q Consensus 32 ~ir~f~~~tgkl~~~~des~~~~~~~~~~~~~~~~~~f~rr~a~e~e~~~~~~~~~~~~~fd~s~~~~~y~t~~------ 105 (374)
+|-|.|..|+|++..+.= | ... .+.|+..|++|.-+...
T Consensus 47 ~vsvID~~t~~v~~~i~v--------------------G--------------~~P-~i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG--------------------A--------------FLS-LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp EEEEEETTTTEEEEEEEE--------------------C--------------TTC-EEEECTTSSCEEEEEEEETTTTS
T ss_pred eEEEEECCCCeEEEEEeC--------------------C--------------CCC-ceEECCCCCEEEEEccccccccc
Confidence 888999999999988742 1 112 79999999987776532
Q ss_pred ----e-eEEEEeeeceeEEEe
Q psy11868 106 ----G-VKFVNIVTNQCVRFI 121 (374)
Q Consensus 106 ----g-ikv~n~~t~~~~~~~ 121 (374)
+ |.|+|+.|+++++.+
T Consensus 92 G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEE
Confidence 1 899999999999986
Done!