BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11874
(767 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/429 (51%), Positives = 276/429 (64%), Gaps = 47/429 (10%)
Query: 7 YSYIIDQQPIGRLLFRQFCAEAKPQYHKYNVLFLAMFTLALYVRYSYIID--QQPIGRLL 64
Y + ++QPIGRLLFR+FCA +P+ + V FL Y D ++ GR L
Sbjct: 53 YHSLCERQPIGRLLFREFCA-TRPELSRC-VAFLDGV-----AEYEVTPDDKRKACGRQL 105
Query: 65 FRQFCAEAKPQY--------------------------------HKYNVFLDSIENYELE 92
+ F + P H+Y + + +Y
Sbjct: 106 TQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEY-LSVAPFADYLDS 164
Query: 93 MDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXX 152
+ NR L K + E QP+T TFR YRVLGKGGFGEVCACQVRATGKMYAC
Sbjct: 165 IYFNRFLQWK--WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 153 XXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEP 212
GE+M L EKQIL+K+NSRFVVSLAYAYETKDALCLVLT+MNGGDLKFHIY+MG +
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-QA 281
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
GF ARA FYAAE+ CGLE LH +VYRD KPENILLDD+GH+RISDLGLAV +PEG++
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 273 VRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRV 332
++GRVGTVGYMAPEV+ NE+YT+SPDW++ GCL++EMI GQ+PF++RK+ +KR+EV+R V
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 333 KEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAG 392
KE E+YS RFS P RLGC G ARE+K+ FK N+KRL AG
Sbjct: 402 KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGG--SAREVKEHPLFKKLNFKRLGAG 459
Query: 393 LCDPPFVPD 401
+ +PPF PD
Sbjct: 460 MLEPPFKPD 468
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 72/89 (80%)
Query: 647 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 706
QP+T TFR YRVLGKGGFGEVCACQVRATGKMYAC GE+M L EKQIL
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 707 QKINSRFVVSLAYAYETKDALCLVLTIID 735
+K+NSRFVVSLAYAYETKDALCLVLT+++
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMN 267
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 59/77 (76%)
Query: 562 PHAVYAKDVLDIEQFSTVKGVTLDTTDDSFYSKFNTGSVSIPWQNEMIETECFKELNVFG 621
P A+Y KDVLDIEQFSTVKGV L+ TD FY KF TGSV IPWQNEM+ETECF+ELNVFG
Sbjct: 469 PQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFG 528
Query: 622 ENNTPSSDVMFTSVPPS 638
+ + D+ + PP+
Sbjct: 529 LDGSVPPDLDWKGQPPA 545
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 482 APEAVDVLSLEIIEHCKESLDSGN-RELFNDCMAAVKTFLAGAPFTEFQDSMFFYRYLQW 540
P+ + + +++ +C + L+ G ++LF + +L+ APF ++ DS++F R+LQW
Sbjct: 114 GPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQW 173
Query: 541 KWLEHHFLYVEVF 553
KWLE + F
Sbjct: 174 KWLERQPVTKNTF 186
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 402 VKRDEVDRRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLG 443
+KR+EV+R VKE E+YS RFS P RLG
Sbjct: 392 IKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/429 (51%), Positives = 275/429 (64%), Gaps = 47/429 (10%)
Query: 7 YSYIIDQQPIGRLLFRQFCAEAKPQYHKYNVLFLAMFTLALYVRYSYIID--QQPIGRLL 64
Y + ++ PIGRLLFR+FCA +P+ + V FL Y D ++ GR L
Sbjct: 53 YHSLCERNPIGRLLFREFCA-TRPELSRC-VAFLDGV-----AEYEVTPDDKRKACGRNL 105
Query: 65 FRQFCAEAKPQY--------------------------------HKYNVFLDSIENYELE 92
+ F + P H+Y + + +Y
Sbjct: 106 TQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEY-LSVAPFADYLDS 164
Query: 93 MDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXX 152
+ NR L K + E QP+T TFR YRVLGKGGFGEVCACQVRATGKMYAC
Sbjct: 165 IYFNRFLQWK--WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 153 XXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEP 212
GE+M L EKQIL+K+NSRFVVSLAYAYETKDALCLVLT+MNGGDLKFHIY+MG +
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-QA 281
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
GF ARA FYAAE+ CGLE LH +VYRD KPENILLDD+GH+RISDLGLAV +PEG++
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 273 VRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRV 332
++GRVGTVGYMAPEV+ NE+YT+SPDW++ GCL++EMI GQ+PF++RK+ +KR+EV+R V
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 333 KEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAG 392
KE E+YS RFS P RLGC G ARE+K+ FK N+KRL AG
Sbjct: 402 KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGG--SAREVKEHPLFKKLNFKRLGAG 459
Query: 393 LCDPPFVPD 401
+ +PPF PD
Sbjct: 460 MLEPPFKPD 468
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 72/89 (80%)
Query: 647 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 706
QP+T TFR YRVLGKGGFGEVCACQVRATGKMYAC GE+M L EKQIL
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 707 QKINSRFVVSLAYAYETKDALCLVLTIID 735
+K+NSRFVVSLAYAYETKDALCLVLT+++
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMN 267
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 59/77 (76%)
Query: 562 PHAVYAKDVLDIEQFSTVKGVTLDTTDDSFYSKFNTGSVSIPWQNEMIETECFKELNVFG 621
P A+Y KDVLDIEQFSTVKGV L+ TD FY KF TGSV IPWQNEM+ETECF+ELNVFG
Sbjct: 469 PQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFG 528
Query: 622 ENNTPSSDVMFTSVPPS 638
+ + D+ + PP+
Sbjct: 529 LDGSVPPDLDWKGQPPA 545
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 482 APEAVDVLSLEIIEHCKESLDSGN-RELFNDCMAAVKTFLAGAPFTEFQDSMFFYRYLQW 540
P+ + + +++ +C + L+ G ++LF + +L+ APF ++ DS++F R+LQW
Sbjct: 114 GPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQW 173
Query: 541 KWLEHHFLYVEVF 553
KWLE + F
Sbjct: 174 KWLERQPVTKNTF 186
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 45 LALYVRYSYIIDQQPIGRLLFRQFCAEAKPQYHKYNVFLDSIENYELEMDENRRLSTKDI 104
L+L Y + ++ PIGRLLFR+FCA +P+ + FLD + YE+ D+ R+ +++
Sbjct: 47 LSLERDYHSLCERNPIGRLLFREFCA-TRPELSRCVAFLDGVAEYEVTPDDKRKACGRNL 105
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 402 VKRDEVDRRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLG 443
+KR+EV+R VKE E+YS RFS P RLG
Sbjct: 392 IKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 105 YNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIE 164
+ E QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++E
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVE 235
Query: 165 KQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGE-PGFDIARARFYA 223
K+IL K++SRF+VSLAYA+ETK LCLV+TIMNGGD+++HIYN+ + PGF RA FY
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTVGY 282
A+++ GLEHLH ++YRD KPEN+LLDD G+VRISDLGLAVE+ G++ +G GT G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 283 MAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCR 342
MAPE++ E+Y +S D+F+ G ++EMI + PFR R E V+ E+ +RV E A Y +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 343 FSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
FS P RLG G L+ F+ +W++LEAG+ PPFVPD
Sbjct: 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDG--LRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 403 K 403
+
Sbjct: 474 R 474
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 647 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 706
QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++EK+IL
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 707 QKINSRFVVSLAYAYETKDALCLVLTII---DVMFTCVQPSETNP 748
K++SRF+VSLAYA+ETK LCLV+TI+ D+ + E NP
Sbjct: 240 AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 534 FYRYLQWKWLEHHFLYVEVFTHGVYCSQPHAVYAKDVLDIEQFSTVKGVTLDTTDDSFYS 593
+R + W+ LE L + VYAK++ D+ FSTVKGV + D F+
Sbjct: 451 LFRDISWRQLEAGMLTPP------FVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQ 504
Query: 594 KFNTGSVSIPWQNEMIETECFKELNVF 620
+F +G+ IPWQ EMIET F +LNV+
Sbjct: 505 EFASGTCPIPWQEEMIETGVFGDLNVW 531
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 480 PQAPEAVDVLSLEIIEHCKESLDSGNRELFNDCMAAVKTFLAGAPFTEFQDSMFFYRYLQ 539
PQA L E + + G LF + AV L APF EF DS +F R+LQ
Sbjct: 117 PQAQLFCSFLDAETVARARAGAGDG---LFQPLLRAVLAHLGQAPFQEFLDSKYFLRFLQ 173
Query: 540 WKWLE 544
WKWLE
Sbjct: 174 WKWLE 178
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 105 YNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIE 164
+ E QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++E
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVE 235
Query: 165 KQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGE-PGFDIARARFYA 223
K+IL K++SRF+VSLAYA+ETK LCLV+TIMNGGD+++HIYN+ + PGF RA FY
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTVGY 282
A+++ GLEHLH ++YRD KPEN+LLDD G+VRISDLGLAVE+ G++ +G GT G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 283 MAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCR 342
MAPE++ E+Y +S D+F+ G ++EMI + PFR R E V+ E+ +RV E A Y +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 343 FSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
FS P RLG G L+ F+ +W++LEAG+ PPFVPD
Sbjct: 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDG--LRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 403 K 403
+
Sbjct: 474 R 474
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 647 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 706
QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++EK+IL
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 707 QKINSRFVVSLAYAYETKDALCLVLTII---DVMFTCVQPSETNP 748
K++SRF+VSLAYA+ETK LCLV+TI+ D+ + E NP
Sbjct: 240 AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 534 FYRYLQWKWLEHHFLYVEVFTHGVYCSQPHAVYAKDVLDIEQFSTVKGVTLDTTDDSFYS 593
+R + W+ LE L + VYAK++ D+ FSTVKGV + D F+
Sbjct: 451 LFRDISWRQLEAGMLTPP------FVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQ 504
Query: 594 KFNTGSVSIPWQNEMIETECFKELNVF 620
+F +G+ IPWQ EMIET F +LNV+
Sbjct: 505 EFASGTCPIPWQEEMIETGVFGDLNVW 531
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 480 PQAPEAVDVLSLEIIEHCKESLDSGNRELFNDCMAAVKTFLAGAPFTEFQDSMFFYRYLQ 539
PQA L E + + G LF + AV L APF EF DS++F R+LQ
Sbjct: 117 PQAQLFCSFLDAETVARARAGAGDG---LFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQ 173
Query: 540 WKWLE 544
WKWLE
Sbjct: 174 WKWLE 178
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 105 YNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIE 164
+ E QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++E
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVE 235
Query: 165 KQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGE-PGFDIARARFYA 223
K+IL K++SRF+VSLAYA+ETK LCLV+TIMNGGD+++HIYN+ + PGF RA FY
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTVGY 282
A+++ GLEHLH ++YRD KPEN+LLDD G+VRISDLGLAVE+ G++ +G GT G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 283 MAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCR 342
MAPE++ E+Y +S D+F+ G ++EMI + PFR R E V+ E+ +RV E A Y +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 343 FSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
FS P RLG G L+ F+ +W++LEAG+ PPFVPD
Sbjct: 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDG--LRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 403 K 403
+
Sbjct: 474 R 474
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 647 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 706
QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++EK+IL
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 707 QKINSRFVVSLAYAYETKDALCLVLTII---DVMFTCVQPSETNP 748
K++SRF+VSLAYA+ETK LCLV+TI+ D+ + E NP
Sbjct: 240 AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 534 FYRYLQWKWLEHHFLYVEVFTHGVYCSQPHAVYAKDVLDIEQFSTVKGVTLDTTDDSFYS 593
+R + W+ LE L + VYAK++ D+ FSTVKGV + D F+
Sbjct: 451 LFRDISWRQLEAGMLTPP------FVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQ 504
Query: 594 KFNTGSVSIPWQNEMIETECFKELNVF 620
+F +G+ IPWQ EMIET F +LNV+
Sbjct: 505 EFASGTCPIPWQEEMIETGVFGDLNVW 531
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 480 PQAPEAVDVLSLEIIEHCKESLDSGNRELFNDCMAAVKTFLAGAPFTEFQDSMFFYRYLQ 539
PQA L E + + G LF + AV L APF EF DS++F R+LQ
Sbjct: 117 PQAQLFCSFLDAETVARARAGAGDG---LFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQ 173
Query: 540 WKWLE 544
WKWLE
Sbjct: 174 WKWLE 178
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 196/301 (65%), Gaps = 4/301 (1%)
Query: 105 YNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIE 164
+ E QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++E
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVE 235
Query: 165 KQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGE-PGFDIARARFYA 223
K+IL K++SRF+VSLAYA+ETK LCLV+TIMNGGD+++HIYN+ + PGF RA FY
Sbjct: 236 KKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTVGY 282
A+++ GLEHLH ++YRD KPEN+LLDD G+VRISDLGLAVE+ G++ +G GT G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 283 MAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCR 342
MAPE++ E+Y +S D+F+ G ++EMI + PFR R E V+ E+ +RV E A Y +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK 415
Query: 343 FSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
FS P RLG G L+ F+ +W++LEAG+ PPFVPD
Sbjct: 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDG--LRTHPLFRDISWRQLEAGMLTPPFVPDS 473
Query: 403 K 403
+
Sbjct: 474 R 474
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 647 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 706
QP+ F +RVLG+GGFGEV ACQ++ATGK+YAC G ++EK+IL
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 707 QKINSRFVVSLAYAYETKDALCLVLTII---DVMFTCVQPSETNP 748
K++SRF+VSLAYA+ETK LCLV+TI+ D+ + E NP
Sbjct: 240 AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 534 FYRYLQWKWLEHHFLYVEVFTHGVYCSQPHAVYAKDVLDIEQFSTVKGVTLDTTDDSFYS 593
+R + W+ LE L + VYAK + D+ FSTVKGV + D F+
Sbjct: 451 LFRDISWRQLEAGMLTPP------FVPDSRTVYAKCIQDVGAFSTVKGVAFEKADTEFFQ 504
Query: 594 KFNTGSVSIPWQNEMIETECFKELNVF 620
+F +G+ IPWQ EMIET F +LNV+
Sbjct: 505 EFASGTCPIPWQEEMIETGVFGDLNVW 531
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 480 PQAPEAVDVLSLEIIEHCKESLDSGNRELFNDCMAAVKTFLAGAPFTEFQDSMFFYRYLQ 539
PQA L E + + G LF + AV L APF EF DS++F R+LQ
Sbjct: 117 PQAQLFCSFLDAETVARARAGAGDG---LFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQ 173
Query: 540 WKWLE 544
WKWLE
Sbjct: 174 WKWLE 178
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 176/302 (58%), Gaps = 13/302 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 171 INSR---FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+++ F+V ++YA+ T D L +L +MNGGDL +H+ G F A RFYAAE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEII 302
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
GLEH+H +VYRD KP NILLD++GHVRISDLGLA + + + VGT GYMAPEV
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEV 361
Query: 288 IDNE-KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDD 346
+ Y S DWFS GC++F+++ G +PFR+ K K E+DR A + FS +
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPE 420
Query: 347 XXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDE 406
RLGC GR GA+E+K++ FF+S +W+ + PP +P R E
Sbjct: 421 LRSLLEGLLQRDVNRRLGC-LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIP--PRGE 476
Query: 407 VD 408
V+
Sbjct: 477 VN 478
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 709 INSR---FVVSLAYAYETKDALCLVLTIID 735
+++ F+V ++YA+ T D L +L +++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 9/54 (16%)
Query: 58 QPIGRLLFRQFC----AEAKPQYHKYNVFLDSIENYE-LEMDENRRLSTKDIYN 106
Q +G LLFR FC EAKP F + I+ YE LE +E R + +++I++
Sbjct: 61 QKLGYLLFRDFCLKHLEEAKPLVE----FYEEIKKYEKLETEEERLVCSREIFD 110
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 176/302 (58%), Gaps = 13/302 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 171 INSR---FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+++ F+V ++YA+ T D L +L +MNGGDL +H+ G F A RFYAAE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEII 302
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
GLEH+H +VYRD KP NILLD++GHVRISDLGLA + + + VGT GYMAPEV
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEV 361
Query: 288 IDNE-KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDD 346
+ Y S DWFS GC++F+++ G +PFR+ K K E+DR A + FS +
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPE 420
Query: 347 XXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDE 406
RLGC GR GA+E+K++ FF+S +W+ + PP +P R E
Sbjct: 421 LRSLLEGLLQRDVNRRLGC-LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIP--PRGE 476
Query: 407 VD 408
V+
Sbjct: 477 VN 478
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 709 INSR---FVVSLAYAYETKDALCLVLTIID 735
+++ F+V ++YA+ T D L +L +++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 9/54 (16%)
Query: 58 QPIGRLLFRQFC----AEAKPQYHKYNVFLDSIENYE-LEMDENRRLSTKDIYN 106
Q +G LLFR FC EAKP F + I+ YE LE +E R + +++I++
Sbjct: 61 QKLGYLLFRDFCLKHLEEAKPLVE----FYEEIKKYEKLETEEERLVCSREIFD 110
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 176/302 (58%), Gaps = 13/302 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 171 INSR---FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+++ F+V ++YA+ T D L +L +MNGGDL +H+ G F A RFYAAE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEII 302
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
GLEH+H +VYRD KP NILLD++GHVRISDLGLA + + + VGT GYMAPEV
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEV 361
Query: 288 IDNE-KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDD 346
+ Y S DWFS GC++F+++ G +PFR+ K K E+DR A + FS +
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPE 420
Query: 347 XXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDE 406
RLGC GR GA+E+K++ FF+S +W+ + PP +P R E
Sbjct: 421 LRSLLEGLLQRDVNRRLGC-LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIP--PRGE 476
Query: 407 VD 408
V+
Sbjct: 477 VN 478
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 709 INSR---FVVSLAYAYETKDALCLVLTIID 735
+++ F+V ++YA+ T D L +L +++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 58 QPIGRLLFRQFCAEAKPQYHKYNVFLDSIENYE-LEMDENRRLSTKDIYN 106
Q +G LLFR FC + F + I+ YE LE +E R +++I++
Sbjct: 61 QKLGYLLFRDFCLNHLEEARPLVEFYEEIKKYEKLETEEERVARSREIFD 110
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 176/302 (58%), Gaps = 13/302 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 171 INSR---FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+++ F+V ++YA+ T D L +L +MNGGDL +H+ G F A RFYAAE++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEII 301
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
GLEH+H +VYRD KP NILLD++GHVRISDLGLA + + + VGT GYMAPEV
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-HASVGTHGYMAPEV 360
Query: 288 IDNE-KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDD 346
+ Y S DWFS GC++F+++ G +PFR+ K K E+DR A + FS +
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPE 419
Query: 347 XXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDE 406
RLGC GR GA+E+K++ FF+S +W+ + PP +P R E
Sbjct: 420 LRSLLEGLLQRDVNRRLGC-LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIP--PRGE 475
Query: 407 VD 408
V+
Sbjct: 476 VN 477
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++R++G+GGFGEV C+ TGKMYA GE++ L E+ +L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 709 INSR---FVVSLAYAYETKDALCLVLTIID 735
+++ F+V ++YA+ T D L +L +++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMN 274
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 58 QPIGRLLFRQFCAEAKPQYHKYNVFLDSIENYE-LEMDENRRLSTKDIYN 106
Q +G LLFR FC + F + I+ YE LE +E R +++I++
Sbjct: 60 QKLGYLLFRDFCLNHLEEARPLVEFYEEIKKYEKLETEEERVARSREIFD 109
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 15/295 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ- 169
+ + F ++++LGKG FG+V + + T + +A ++EK++L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
F+ + ++TK+ L V+ +NGGDL +HI + FD++RA FYAAE++ G
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILG 131
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVI 288
L+ LH G+VYRD K +NILLD GH++I+D G+ E G++ GT Y+APE++
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXX 348
+KY +S DW+SFG L++EM+ GQ+PF + E +E+ ++ D Y +
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIRMDNPFYPRWLEKEAK 247
Query: 349 XXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
P RLG +++Q F+ NW+ LE DPPF P VK
Sbjct: 248 DLLVKLFVREPEKRLGVRG------DIRQHPLFREINWEELERKEIDPPFRPKVK 296
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ- 707
+ + F ++++LGKG FG+V + + T + +A ++EK++L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 708 KINSRFVVSLAYAYETKDALCLVLTIID 735
F+ + ++TK+ L V+ ++
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLN 102
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 15/295 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ- 169
+ + F ++++LGKG FG+V + + T + +A ++EK++L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
F+ + ++TK+ L V+ +NGGDL +HI + FD++RA FYAAE++ G
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILG 130
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVI 288
L+ LH G+VYRD K +NILLD GH++I+D G+ E G++ GT Y+APE++
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXX 348
+KY +S DW+SFG L++EM+ GQ+PF + E +E+ ++ D Y +
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE----EELFHSIRMDNPFYPRWLEKEAK 246
Query: 349 XXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
P RLG +++Q F+ NW+ LE DPPF P VK
Sbjct: 247 DLLVKLFVREPEKRLGVRG------DIRQHPLFREINWEELERKEIDPPFRPKVK 295
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ- 707
+ + F ++++LGKG FG+V + + T + +A ++EK++L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 708 KINSRFVVSLAYAYETKDALCLVLTIID 735
F+ + ++TK+ L V+ ++
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLN 101
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L YA++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSAL 118
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVID 289
E+LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV++
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
+ Y + DW+ G +++EM+ G+ PF R E++ +E+ ++ S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 229
Query: 345 DDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKR 404
+ P+ RLG G A+E+ + FF S NW+ + PPF P V
Sbjct: 230 PEAKSLLAGLLKKDPKQRLG--GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT- 286
Query: 405 DEVDRRVKED 414
EVD R +D
Sbjct: 287 SEVDTRYFDD 296
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L YA++T D LC V+
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM 84
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L YA++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSAL 121
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVID 289
E+LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV++
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
+ Y + DW+ G +++EM+ G+ PF R E++ +E+ ++ S
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 232
Query: 345 DDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKR 404
+ P+ RLG G A+E+ + FF S NW+ + PPF P V
Sbjct: 233 PEAKSLLAGLLKKDPKQRLG--GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT- 289
Query: 405 DEVDRRVKED 414
EVD R +D
Sbjct: 290 SEVDTRYFDD 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L YA++T D LC V+
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVM 87
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L YA++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSAL 118
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVID 289
E+LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV++
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
+ Y + DW+ G +++EM+ G+ PF R E++ +E+ ++ S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 229
Query: 345 DDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKR 404
+ P+ RLG G A+E+ + FF S NW+ + PPF P V
Sbjct: 230 PEAKSLLAGLLKKDPKQRLG--GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT- 286
Query: 405 DEVDRRVKED 414
EVD R +D
Sbjct: 287 SEVDTRYFDD 296
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L YA++T D LC V+
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM 84
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L YA++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSAL 118
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVID 289
E+LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV++
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
+ Y + DW+ G +++EM+ G+ PF R E++ +E+ ++ S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 229
Query: 345 DDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKR 404
+ P+ RLG G A+E+ + FF S NW+ + PPF P V
Sbjct: 230 PEAKSLLAGLLKKDPKQRLG--GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT- 286
Query: 405 DEVDRRVKED 414
EVD R +D
Sbjct: 287 SEVDTRYFDD 296
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L YA++T D LC V+
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM 84
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L YA++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSAL 118
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVID 289
E+LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV++
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
+ Y + DW+ G +++EM+ G+ PF R E++ +E+ ++ S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 229
Query: 345 DDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKR 404
+ P+ RLG G A+E+ + FF S NW+ + PPF P V
Sbjct: 230 PEAKSLLAGLLKKDPKQRLG--GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT- 286
Query: 405 DEVDRRVKED 414
EVD R +D
Sbjct: 287 SEVDTRYFDD 296
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L YA++T D LC V+
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM 84
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L YA++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSAL 123
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVID 289
E+LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV++
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
+ Y + DW+ G +++EM+ G+ PF R E++ +E+ ++ S
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 234
Query: 345 DDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKR 404
+ P+ RLG G A+E+ + FF S NW+ + PPF P V
Sbjct: 235 PEAKSLLAGLLKKDPKQRLG--GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT- 291
Query: 405 DEVDRRVKED 414
EVD R +D
Sbjct: 292 SEVDTRYFDD 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L YA++T D LC V+
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVM 89
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L YA++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSAL 118
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVID 289
E+LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV++
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
+ Y + DW+ G +++EM+ G+ PF R E++ +E+ ++ S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 229
Query: 345 DDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKR 404
+ P+ RLG G A+E+ + FF S NW+ + PPF P V
Sbjct: 230 PEAKSLLAGLLKKDPKQRLG--GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT- 286
Query: 405 DEVDRRVKED 414
EVD R +D
Sbjct: 287 SEVDTRYFDD 296
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + + E ++LQ
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L YA++T D LC V+
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM 84
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 154/299 (51%), Gaps = 11/299 (3%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK 165
N + + F VLGKG FG+V + T ++YA ++EK
Sbjct: 11 NNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 166 QILQKINSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
++L ++ F+ L ++T D L V+ +NGGDL +HI +G F +A FYAA
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAA 127
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYM 283
E+ GL LH G++YRD K +N++LD GH++I+D G+ E + +G + R GT Y+
Sbjct: 128 EISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYI 187
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRF 343
APE+I + Y S DW+++G L++EM+ GQ PF E DE+ + + E Y
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE----DELFQSIMEHNVSYPKSL 243
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
S + P RLG CG G R++++ FF+ +W++LE PPF P V
Sbjct: 244 SKEAVSICKGLMTKHPAKRLG--CGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKV 300
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 637 PSE--TNPSCFPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXX 694
PSE PS + F VLGKG FG+V + T ++YA
Sbjct: 2 PSEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDD 61
Query: 695 GESMVLIEKQILQKINS-RFVVSLAYAYETKDALCLVLTII---DVMFTCVQ 742
++EK++L ++ F+ L ++T D L V+ + D+M+ Q
Sbjct: 62 DVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ 113
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 14/291 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRA---TGKMYACXXXXXXXXXXXXGESMVLIEKQILQKIN 172
F + +VLG+G FG+V + +G +YA +E+ IL +N
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRD-RVRTKMERDILADVN 88
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
FVV L YA++T+ L L+L + GGDL + E F +FY AE+ GL+H
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 233 LHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVIDNE 291
LH +G++YRD KPENILLD+ GH++++D GL+ E I + GTV YMAPEV++ +
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
+++S DW+S+G L+FEM+ G PF+ + R E + + S +
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGK----DRKETMTLILKAKLGMPQFLSTEAQSLL 261
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
+P +RLG G GA E+K+ F+ + +W +L PPF P V
Sbjct: 262 RALFKRNPANRLG--SGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAV 310
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 654 FRMYRVLGKGGFGEVCACQVRA---TGKMYACXXXXXXXXXXXXGESMVLIEKQILQKIN 710
F + +VLG+G FG+V + +G +YA +E+ IL +N
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRD-RVRTKMERDILADVN 88
Query: 711 SRFVVSLAYAYETKDALCLVLTII-----------DVMFT 739
FVV L YA++T+ L L+L + +VMFT
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT 128
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 161/319 (50%), Gaps = 15/319 (4%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQV---RATGKMYACXXXXXXXXXXX 155
L T ++ + + + F + +VLG G +G+V + TGK+YA
Sbjct: 39 LRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK 98
Query: 156 XGES-MVLIEKQILQKI-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG 213
+ E+Q+L+ I S F+V+L YA++T+ L L+L +NGG+L H+
Sbjct: 99 AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ---RER 155
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
F + Y E++ LEHLH +G++YRD K ENILLD GHV ++D GL+ E E+
Sbjct: 156 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 274 RGR--VGTVGYMAPEVI--DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVD 329
R GT+ YMAP+++ + + + DW+S G L++E++ G +PF E + E+
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
Query: 330 RRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RR+ + Y S P+ RLG CG A E+K+ FF+ NW L
Sbjct: 276 RRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG--CGPRDADEIKEHLFFQKINWDDL 333
Query: 390 EAGLCDPPFVPDVKRDEVD 408
A PF P V RDE+D
Sbjct: 334 AAKKVPAPFKP-VIRDELD 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 641 NPSCFPQPITYKTFRMYRVLGKGGFGEVCACQV---RATGKMYACXXXXXXXXXXXXGES 697
N + + + + F + +VLG G +G+V + TGK+YA +
Sbjct: 43 NLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT 102
Query: 698 -MVLIEKQILQKI-NSRFVVSLAYAYETKDALCLVLTIID--VMFTCVQPSE 745
E+Q+L+ I S F+V+L YA++T+ L L+L I+ +FT + E
Sbjct: 103 EHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE 154
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 148/287 (51%), Gaps = 11/287 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ-KINSR 174
F VLGKG FG+V + + T ++YA ++EK++L
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
F+ L ++T D L V+ +NGGDL +HI +G F A FYAAE+ GL L
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQ 138
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVIDNEKY 293
G++YRD K +N++LD GH++I+D G+ E I +G + + GT Y+APE+I + Y
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXXX 353
S DW++FG L++EM+ GQAPF E DE+ + + E Y S +
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSIMEHNVAYPKSMSKEAVAICKG 254
Query: 354 XXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVP 400
P RLG CG G R++K+ FF+ +W++LE PP+ P
Sbjct: 255 LMTKHPGKRLG--CGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 299
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ-KINSR 712
F VLGKG FG+V + + T ++YA ++EK++L
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 713 FVVSLAYAYETKDALCLVLTII---DVMFTCVQ 742
F+ L ++T D L V+ + D+M+ Q
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ 114
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 16/296 (5%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATG----KMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
F + +VLG+G FG+V + + +G ++YA +E+ IL ++
Sbjct: 26 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEV 83
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N F+V L YA++T+ L L+L + GGDL + E F +FY AE+ L+
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVIDN 290
HLH +G++YRD KPENILLD+ GH++++D GL+ E I + GTV YMAPEV++
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXX 350
+T S DW+SFG L+FEM+ G PF+ + R E + + S +
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGK----DRKETMTMILKAKLGMPQFLSPEAQSL 256
Query: 351 XXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDE 406
+P +RLG G G E+K+ FF + +W +L PPF P R E
Sbjct: 257 LRMLFKRNPANRLG--AGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPE 310
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATG----KMYACXXXXXXXXXXXXGESMVLIEKQILQKI 709
F + +VLG+G FG+V + + +G ++YA +E+ IL ++
Sbjct: 26 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEV 83
Query: 710 NSRFVVSLAYAYETKDALCLVLTII-----------DVMFT 739
N F+V L YA++T+ L L+L + +VMFT
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT 124
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 148/287 (51%), Gaps = 11/287 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ-KINSR 174
F VLGKG FG+V + + T ++YA ++EK++L
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
F+ L ++T D L V+ +NGGDL +HI +G F A FYAAE+ GL L
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQ 459
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVIDNEKY 293
G++YRD K +N++LD GH++I+D G+ E I +G + + GT Y+APE+I + Y
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXXX 353
S DW++FG L++EM+ GQAPF E DE+ + + E Y S +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSIMEHNVAYPKSMSKEAVAICKG 575
Query: 354 XXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVP 400
P RLG CG G R++K+ FF+ +W++LE PP+ P
Sbjct: 576 LMTKHPGKRLG--CGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 620
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ-KINSR 712
F VLGKG FG+V + + T ++YA ++EK++L
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 713 FVVSLAYAYETKDALCLVLTII---DVMFTCVQ 742
F+ L ++T D L V+ + D+M+ Q
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ 435
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 147/303 (48%), Gaps = 10/303 (3%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK 165
N + F RVLGKG FG+V +V+ TG +YA + EK
Sbjct: 15 NSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEK 74
Query: 166 QILQKI-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
+IL N F+ L ++T D L V+ +NGGDL FHI FD ARARFYAA
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAA 131
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYM 283
E++ L LH G++YRD K +N+LLD GH +++D G+ E I G + GT Y+
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRF 343
APE++ Y + DW++ G L++EM+ G APF E D++ + D Y
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE----DDLFEAILNDEVVYPTWL 247
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
+D +P RLG + G + + FFK +W +L +PPF P +K
Sbjct: 248 HEDATGILKSFMTKNPTMRLGS-LTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIK 306
Query: 404 RDE 406
E
Sbjct: 307 SRE 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 653 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI-NS 711
F RVLGKG FG+V +V+ TG +YA + EK+IL N
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 712 RFVVSLAYAYETKDALCLVLTII---DVMF 738
F+ L ++T D L V+ + D+MF
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMF 113
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 150/290 (51%), Gaps = 16/290 (5%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATG----KMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
F + +VLG+G FG+V + + +G ++YA +E+ IL ++
Sbjct: 27 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEV 84
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N F+V L YA++T+ L L+L + GGDL + E F +FY AE+ L+
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVIDN 290
HLH +G++YRD KPENILLD+ GH++++D GL+ E I + GTV YMAPEV++
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXX 350
+T S DW+SFG L+FEM+ G PF+ + R E + + S +
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGK----DRKETMTMILKAKLGMPQFLSPEAQSL 257
Query: 351 XXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVP 400
+P +RLG G G E+K+ FF + +W +L PPF P
Sbjct: 258 LRMLFKRNPANRLG--AGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATG----KMYACXXXXXXXXXXXXGESMVLIEKQILQKI 709
F + +VLG+G FG+V + + +G ++YA +E+ IL ++
Sbjct: 27 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEV 84
Query: 710 NSRFVVSLAYAYETKDALCLVLTII-----------DVMFT 739
N F+V L YA++T+ L L+L + +VMFT
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT 125
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 22/307 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L Y+++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSAL 121
Query: 231 EHLHY-IGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
++LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV+
Sbjct: 122 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRK-----EMVKRDEVDRRVKEDAEKYSCRF 343
++ Y + DW+ G +++EM+ G+ PF + E++ +E+ ++
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI---------RFPRTL 232
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
+ P+ RLG G A+E+ Q FF W+ + PPF P V
Sbjct: 233 GPEAKSLLSGLLKKDPKQRLG--GGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVT 290
Query: 404 RDEVDRR 410
E D R
Sbjct: 291 -SETDTR 296
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L Y+++T D LC V+
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVM 87
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 150/290 (51%), Gaps = 16/290 (5%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATG----KMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
F + +VLG+G FG+V + + +G ++YA +E+ IL ++
Sbjct: 26 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEV 83
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N F+V L YA++T+ L L+L + GGDL + E F +FY AE+ L+
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVIDN 290
HLH +G++YRD KPENILLD+ GH++++D GL+ E I + GTV YMAPEV++
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXX 350
+T S DW+SFG L+FEM+ G PF+ + R E + + S +
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGK----DRKETMTMILKAKLGMPQFLSPEAQSL 256
Query: 351 XXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVP 400
+P +RLG G G E+K+ FF + +W +L PPF P
Sbjct: 257 LRMLFKRNPANRLG--AGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATG----KMYACXXXXXXXXXXXXGESMVLIEKQILQKI 709
F + +VLG+G FG+V + + +G ++YA +E+ IL ++
Sbjct: 26 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEV 83
Query: 710 NSRFVVSLAYAYETKDALCLVLTII-----------DVMFT 739
N F+V L YA++T+ L L+L + +VMFT
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT 124
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 22/307 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L Y+++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSAL 123
Query: 231 EHLHY-IGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
++LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV+
Sbjct: 124 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRK-----EMVKRDEVDRRVKEDAEKYSCRF 343
++ Y + DW+ G +++EM+ G+ PF + E++ +E+ ++
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI---------RFPRTL 234
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
+ P+ RLG G A+E+ Q FF W+ + PPF P V
Sbjct: 235 GPEAKSLLSGLLKKDPKQRLG--GGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVT 292
Query: 404 RDEVDRR 410
E D R
Sbjct: 293 -SETDTR 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L Y+++T D LC V+
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVM 89
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 22/307 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L Y+++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSAL 122
Query: 231 EHLHY-IGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
++LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV+
Sbjct: 123 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRK-----EMVKRDEVDRRVKEDAEKYSCRF 343
++ Y + DW+ G +++EM+ G+ PF + E++ +E+ ++
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI---------RFPRTL 233
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
+ P+ RLG G A+E+ Q FF W+ + PPF P V
Sbjct: 234 GPEAKSLLSGLLKKDPKQRLG--GGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVT 291
Query: 404 RDEVDRR 410
E D R
Sbjct: 292 -SETDTR 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L Y+++T D LC V+
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVM 88
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 22/307 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L Y+++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSAL 264
Query: 231 EHLHY-IGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
++LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV+
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRK-----EMVKRDEVDRRVKEDAEKYSCRF 343
++ Y + DW+ G +++EM+ G+ PF + E++ +E+ ++
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI---------RFPRTL 375
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
+ P+ RLG G A+E+ Q FF W+ + PPF P V
Sbjct: 376 GPEAKSLLSGLLKKDPKQRLG--GGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVT 433
Query: 404 RDEVDRR 410
E D R
Sbjct: 434 -SETDTR 439
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 709 INSRFVVSLAYAYETKDALCLVL 731
F+ +L Y+++T D LC V+
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVM 230
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 22/307 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+T F ++LGKG FG+V + +ATG+ YA + L E ++LQ
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
F+ +L Y+++T D LC V+ NGG+L FH+ E F RARFY AE++ L
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSAL 261
Query: 231 EHLHY-IGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
++LH +VYRD K EN++LD GH++I+D GL E I +G +++ GT Y+APEV+
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRK-----EMVKRDEVDRRVKEDAEKYSCRF 343
++ Y + DW+ G +++EM+ G+ PF + E++ +E+ ++
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI---------RFPRTL 372
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
+ P+ RLG G A+E+ Q FF W+ + PPF P V
Sbjct: 373 GPEAKSLLSGLLKKDPKQRLG--GGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVT 430
Query: 404 RDEVDRR 410
E D R
Sbjct: 431 -SETDTR 436
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 621 GENNTPSSDVMFTSVPPSETNPS-----CFPQP---ITYKTFRMYRVLGKGGFGEVCACQ 672
G ++++ F S PS+ + + +P +T F ++LGKG FG+V +
Sbjct: 109 GLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVK 168
Query: 673 VRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVL 731
+ATG+ YA + L E ++LQ F+ +L Y+++T D LC V+
Sbjct: 169 EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 152/302 (50%), Gaps = 11/302 (3%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI 167
+ P+ + F + RV+G+G + +V +++ T ++YA V EK +
Sbjct: 3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 62
Query: 168 L-QKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEV 226
Q N F+V L ++T+ L V+ +NGGDL FH+ P ARFY+AE+
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEI 119
Query: 227 LCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAP 285
L +LH G++YRD K +N+LLD GH++++D G+ E + G++ GT Y+AP
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYS 340
E++ E Y +S DW++ G L+FEM+ G++PF + D + + + E +
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 239
Query: 341 CRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVP 400
S P+ RLGCH + G +++ FF++ +W +E PPF P
Sbjct: 240 RSLSVKAASVLKSFLNKDPKERLGCHP-QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 298
Query: 401 DV 402
++
Sbjct: 299 NI 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 648 PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL- 706
P+ + F + RV+G+G + +V +++ T ++YA V EK +
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 707 QKINSRFVVSLAYAYETKDALCLVLTII---DVMF 738
Q N F+V L ++T+ L V+ + D+MF
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 99
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
Query: 94 DENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXX 153
+E ++T++ + + F + RV+G+G + +V +++ T ++YA
Sbjct: 32 EEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN 91
Query: 154 XXXGESMVLIEKQIL-QKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEP 212
V EK + Q N F+V L ++T+ L V+ +NGGDL FH+ P
Sbjct: 92 DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP 151
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGE 271
ARFY+AE+ L +LH G++YRD K +N+LLD GH++++D G+ E + G+
Sbjct: 152 E---EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208
Query: 272 SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRD 326
+ GT Y+APE++ E Y +S DW++ G L+FEM+ G++PF + D
Sbjct: 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 268
Query: 327 EVDRRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNW 386
+ + + E + S P+ RLGCH + G +++ FF++ +W
Sbjct: 269 YLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP-QTGFADIQGHPFFRNVDW 327
Query: 387 KRLEAGLCDPPFVPDV 402
+E PPF P++
Sbjct: 328 DMMEQKQVVPPFKPNI 343
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL-Q 707
+ + F + RV+G+G + +V +++ T ++YA V EK + Q
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 708 KINSRFVVSLAYAYETKDALCLVLTII---DVMF 738
N F+V L ++T+ L V+ + D+MF
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 142
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 150/299 (50%), Gaps = 11/299 (3%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL-Q 169
+ + F + RV+G+G + +V +++ T ++YA V EK + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
N F+V L ++T+ L V+ +NGGDL FH+ P ARFY+AE+
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLA 118
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
L +LH G++YRD K +N+LLD GH++++D G+ E + G++ GT Y+APE++
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDEVDRRVKEDAEKYSCRF 343
E Y +S DW++ G L+FEM+ G++PF + D + + + E +
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 238
Query: 344 SDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
S P+ RLGCH + G +++ FF++ +W +E PPF P++
Sbjct: 239 SVKAASVLKSFLNKDPKERLGCHP-QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNI 296
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL-Q 707
+ + F + RV+G+G + +V +++ T ++YA V EK + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 708 KINSRFVVSLAYAYETKDALCLVLTII---DVMF 738
N F+V L ++T+ L V+ + D+MF
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 95
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 155/315 (49%), Gaps = 11/315 (3%)
Query: 95 ENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXX 154
E ++T++ + + F + RV+G+G + +V +++ T ++YA
Sbjct: 1 EKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND 60
Query: 155 XXGESMVLIEKQIL-QKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG 213
V EK + Q N F+V L ++T+ L V+ +NGGDL FH+ P
Sbjct: 61 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 120
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGES 272
ARFY+AE+ L +LH G++YRD K +N+LLD GH++++D G+ E + G++
Sbjct: 121 ---EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 177
Query: 273 VRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF-----RRRKEMVKRDE 327
GT Y+APE++ E Y +S DW++ G L+FEM+ G++PF + D
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
Query: 328 VDRRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWK 387
+ + + E + S P+ RLGC + G +++ FF++ +W
Sbjct: 238 LFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGC-LPQTGFADIQGHPFFRNVDWD 296
Query: 388 RLEAGLCDPPFVPDV 402
+E PPF P++
Sbjct: 297 MMEQKQVVPPFKPNI 311
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL-Q 707
+ + F + RV+G+G + +V +++ T ++YA V EK + Q
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 708 KINSRFVVSLAYAYETKDALCLVLTII---DVMF 738
N F+V L ++T+ L V+ + D+MF
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 110
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 25/315 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRA-----TGKMYACXXXXXXXXXXXXGESM-VLIEKQILQ 169
F + RVLGKGG+G+V QVR TGK++A ++ E+ IL+
Sbjct: 19 FELLRVLGKGGYGKVF--QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++ F+V L YA++T L L+L ++GG+L + G F A FY AE+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMA 133
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
L HLH G++YRD KPENI+L+ GHV+++D GL E I +G GT+ YMAPE++
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXX 348
+ + DW+S G L+++M+ G PF D++ + K + Y + + D
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI-LKCKLNLPPYLTQEARD-- 250
Query: 349 XXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDEVD 408
+ SRLG G G E++ FF+ NW+ L A +PPF P ++ +
Sbjct: 251 -LLKKLLKRNAASRLGAGPGDAG--EVQAHPFFRHINWEELLARKVEPPFKPLLQSE--- 304
Query: 409 RRVKEDAEKYSCRFS 423
ED ++ +F+
Sbjct: 305 ----EDVSQFDSKFT 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 638 SETNPSCFPQPITYKTFRMYRVLGKGGFGEVCACQVRA-----TGKMYACXXXXXXXXXX 692
SET+ + P+ I + F + RVLGKGG+G+V QVR TGK++A
Sbjct: 3 SETSVNRGPEKIRPECFELLRVLGKGGYGKV--FQVRKVTGANTGKIFAMKVLKKAMIVR 60
Query: 693 XXGESM-VLIEKQILQKINSRFVVSLAYAYETKDALCLVL 731
++ E+ IL+++ F+V L YA++T L L+L
Sbjct: 61 NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 25/315 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRA-----TGKMYACXXXXXXXXXXXXGESM-VLIEKQILQ 169
F + RVLGKGG+G+V QVR TGK++A ++ E+ IL+
Sbjct: 19 FELLRVLGKGGYGKVF--QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++ F+V L YA++T L L+L ++GG+L + G F A FY AE+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMA 133
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGESVRGRVGTVGYMAPEVI 288
L HLH G++YRD KPENI+L+ GHV+++D GL E I +G GT+ YMAPE++
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXX 348
+ + DW+S G L+++M+ G PF D++ + K + Y + + D
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI-LKCKLNLPPYLTQEARD-- 250
Query: 349 XXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDEVD 408
+ SRLG G G E++ FF+ NW+ L A +PPF P ++ +
Sbjct: 251 -LLKKLLKRNAASRLGAGPGDAG--EVQAHPFFRHINWEELLARKVEPPFKPLLQSE--- 304
Query: 409 RRVKEDAEKYSCRFS 423
ED ++ +F+
Sbjct: 305 ----EDVSQFDSKFT 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 638 SETNPSCFPQPITYKTFRMYRVLGKGGFGEVCACQVRA-----TGKMYACXXXXXXXXXX 692
SET+ + P+ I + F + RVLGKGG+G+V QVR TGK++A
Sbjct: 3 SETSVNRGPEKIRPECFELLRVLGKGGYGKV--FQVRKVTGANTGKIFAMKVLKKAMIVR 60
Query: 693 XXGESM-VLIEKQILQKINSRFVVSLAYAYETKDALCLVL 731
++ E+ IL+++ F+V L YA++T L L+L
Sbjct: 61 NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK-INSR 174
F +V+GKG FG+V + +A YA E ++ E+ +L K +
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
F+V L ++++T D L VL +NGG+L +H+ E F RARFYAAE+ L +LH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLH 156
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKY 293
+ +VYRD KPENILLD GH+ ++D GL E E S GT Y+APEV+ + Y
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXXX 353
+ DW+ G +++EM+ G PF R D + + + ++
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK----PLQLKPNITNSARHLLEG 272
Query: 354 XXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
RLG + E+K FF NW L PPF P+V
Sbjct: 273 LLQKDRTKRLGA---KDDFMEIKSHVFFSLINWDDLINKKITPPFNPNV 318
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 640 TNPSCFPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMV 699
+NP P F +V+GKG FG+V + +A YA E +
Sbjct: 31 SNPHAKPS-----DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI 85
Query: 700 LIEKQILQK-INSRFVVSLAYAYETKDALCLVLTIID 735
+ E+ +L K + F+V L ++++T D L VL I+
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + +G G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ M GGD+ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + +G G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 103 LVKLEFSFKDNSNLYMVM 120
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + +G G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ M GGD+ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + +G G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 103 LVKLEFSFKDNSNLYMVM 120
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 152
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 206
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 262
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 263 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 312
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYV 116
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG +A L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L Y+++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG +A L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L Y+++ L +V+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYV 123
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYV 124
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYV 124
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 152
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 206
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 262
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 263 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 312
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYV 116
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 146
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D+ G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 200
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 256
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 257 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYV 110
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG +A L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L Y+++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG +A L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L Y+++ L +V+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYV 123
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG +A L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L Y+++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG +A L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L Y+++ L +V+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYV 123
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 180
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 234
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 290
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 291 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 340
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYV 144
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F R LG G FG V + + TG YA L EK+I Q +N F
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +VL GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F R LG G FG V + + TG YA L EK+I Q +N F
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +VL
Sbjct: 104 LVKLEFSFKDNSNLYMVL 121
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 104 LVKLEFSFKDNSNLYMVM 121
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYV 124
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLXGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWTLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYV 124
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLAGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D GLA + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 103 LVKLEFSFKDNSNLYMVM 120
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 145
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWTLCGTPEYLAPEIILSK 199
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 255
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 256 RNLLQVDLTKRFGNL--KDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 305
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYV 109
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 154
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 208
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 264
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 265 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYV 118
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYV 124
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D GLA + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 103 LVKLEFSFKDNSNLYMVM 120
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADEPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 145/294 (49%), Gaps = 23/294 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMG--GEPGFDIARARFYAAEVLCGLEHL 233
+V L ++++ L +V+ + GG++ H+ +G EP ARFYAA+++ E+L
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP-----HARFYAAQIVLTFEYL 157
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVID 289
H + L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIIL 211
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXX 349
++ Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKD 267
Query: 350 XXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 268 LLRNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYV 124
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++ ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIXNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYV 124
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNLPN--GVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIIISK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + +G G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + +G G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 180
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 234
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 290
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 291 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 340
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYV 144
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI++M G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 103 LVKLEFSFKDNSNLYMVM 120
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 103 LVKLEFSFKDNSNLYMVM 120
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVL 731
+V L ++++ L +V+
Sbjct: 103 LVKLEFSFKDNSNLYMVM 120
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+AP +I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPAIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVL 731
+ L ++++ L +V+
Sbjct: 104 LTKLEFSFKDNSNLYMVM 121
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKAFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 146/308 (47%), Gaps = 13/308 (4%)
Query: 100 STKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES 159
S +++E + + + F + R +GKG FG+VC Q T KMYA
Sbjct: 1 SMPPVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR 60
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
V E QI+Q + F+V+L Y+++ ++ + +V+ ++ GGDL++H+ F
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ---NVHFKEETV 117
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGT 279
+ + E++ L++L +++RD KP+NILLD++GHV I+D +A +P + GT
Sbjct: 118 KLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGT 177
Query: 280 VGYMAPEVIDNEK---YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDA 336
YMAPE+ + K Y+++ DW+S G +E++ G+ P+ R + E+ +
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK-EIVHTFETTV 236
Query: 337 EKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDP 396
Y +S + +P R +++ + NW + P
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQRFS------QLSDVQNFPYMNDINWDAVFQKRLIP 290
Query: 397 PFVPDVKR 404
F+P+ R
Sbjct: 291 GFIPNKGR 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 649 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 708
+ + F + R +GKG FG+VC Q T KMYA V E QI+Q
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 709 INSRFVVSLAYAYETKDALCLVLTII 734
+ F+V+L Y+++ ++ + +V+ ++
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLL 97
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVL 731
+ L ++++ L +V+
Sbjct: 104 LTKLEFSFKDNSNLYMVM 121
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ L ++++ L +V+ GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR---FXEPHARFYAAQIVLTFEYLHS 160
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+++D G+++++D G A + V+GR GT Y+APE+I ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLAPEIILSK 214
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 270
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 271 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + TG YA L EK+ILQ +N F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 714 VVSLAYAYETKDALCLVL 731
+ L ++++ L +V+
Sbjct: 104 LTKLEFSFKDNSNLYMVM 121
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 180
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+G GT Y+APE+I ++
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGATWTLCGTPEYLAPEIILSK 234
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 290
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 291 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 340
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYV 144
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L ++++ L +V+ + GG++ H+ +G F ARFYAA+++ E+LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS 159
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV----GTVGYMAPEVIDNE 291
+ L+YRD KPEN+L+D G+++++D G A + V+GR GT +APE+I ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEALAPEIILSK 213
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXX 351
Y + DW++ G LI+EM G PF + + ++ ++ ++ FS D
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVSGKVRFPSHFSSDLKDLL 269
Query: 352 XXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVK 403
R G + G ++K ++F +T+W + + PF+P K
Sbjct: 270 RNLLQVDLTKRFGNL--KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 319
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + LG G FG V + + +G YA L EK+ILQ +N F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 714 VVSLAYAYETKDALCLVLTII 734
+V L ++++ L +V+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYV 123
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 13/298 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F++ R LG G FG V + R G+ YA E+ +L +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
F++ + ++ + +++ + GG+L F + F A+FYAAEV LE
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQR--FPNPVAKFYAAEVCLALE 120
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNE 291
+LH ++YRD KPENILLD GH++I+D G A +P + GT Y+APEV+ +
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP--DVTYXLCGTPDYIAPEVVSTK 178
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAE-KYSCRFSDDXXXX 350
Y S DW+SFG LI+EM+ G PF M +++ +AE ++ F++D
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI-----LNAELRFPPFFNEDVKDL 233
Query: 351 XXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRDEVD 408
RLG G ++K +FK W++L + + P+ P +++ + D
Sbjct: 234 LSRLITRDLSQRLGNLQN--GTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGD 289
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 155/325 (47%), Gaps = 43/325 (13%)
Query: 102 KDIYNEIQPITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES 159
KD N+I+ + K + + +V+G+G FGEV + ++T K+YA +
Sbjct: 60 KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR- 218
E+ I+ NS +VV L YA++ L +V+ M GGDL + N +D+
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN------YDVPEK 173
Query: 219 -ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR--G 275
ARFY AEV+ L+ +H +G ++RD KP+N+LLD GH++++D G +++ + VR
Sbjct: 174 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 276 RVGTVGYMAPEVIDNEK----YTYSPDWFSFGCLIFEMIEGQAPF-------RRRKEMVK 324
VGT Y++PEV+ ++ Y DW+S G ++EM+ G PF K M
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Query: 325 RDEV----DRRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEF 380
++ + D + ++A+ C F D GR G E+K+ F
Sbjct: 294 KNSLTFPDDNDISKEAKNLICAFLTDRE----------------VRLGRNGVEEIKRHLF 337
Query: 381 FKSTNWKRLEAGLCDPPFVPDVKRD 405
FK+ W P VPD+ D
Sbjct: 338 FKNDQWAWETLRDTVAPVVPDLSSD 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
+ + +V+G+G FGEV + ++T K+YA + E+ I+ NS +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 714 VVSLAYAYETKDALCLVL 731
VV L YA++ L +V+
Sbjct: 136 VVQLFYAFQDDRYLYMVM 153
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 155/325 (47%), Gaps = 43/325 (13%)
Query: 102 KDIYNEIQPITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES 159
KD N+I+ + K + + +V+G+G FGEV + ++T K+YA +
Sbjct: 55 KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA 114
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR- 218
E+ I+ NS +VV L YA++ L +V+ M GGDL + N +D+
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN------YDVPEK 168
Query: 219 -ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR--G 275
ARFY AEV+ L+ +H +G ++RD KP+N+LLD GH++++D G +++ + VR
Sbjct: 169 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 276 RVGTVGYMAPEVIDNEK----YTYSPDWFSFGCLIFEMIEGQAPF-------RRRKEMVK 324
VGT Y++PEV+ ++ Y DW+S G ++EM+ G PF K M
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288
Query: 325 RDEV----DRRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEF 380
++ + D + ++A+ C F D GR G E+K+ F
Sbjct: 289 KNSLTFPDDNDISKEAKNLICAFLTDRE----------------VRLGRNGVEEIKRHLF 332
Query: 381 FKSTNWKRLEAGLCDPPFVPDVKRD 405
FK+ W P VPD+ D
Sbjct: 333 FKNDQWAWETLRDTVAPVVPDLSSD 357
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
+ + +V+G+G FGEV + ++T K+YA + E+ I+ NS +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 714 VVSLAYAYETKDALCLVL 731
VV L YA++ L +V+
Sbjct: 131 VVQLFYAFQDDRYLYMVM 148
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 155/325 (47%), Gaps = 43/325 (13%)
Query: 102 KDIYNEIQPITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES 159
KD N+I+ + K + + +V+G+G FGEV + ++T K+YA +
Sbjct: 60 KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR- 218
E+ I+ NS +VV L YA++ L +V+ M GGDL + N +D+
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN------YDVPEK 173
Query: 219 -ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR--G 275
ARFY AEV+ L+ +H +G ++RD KP+N+LLD GH++++D G +++ + VR
Sbjct: 174 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 276 RVGTVGYMAPEVIDNEK----YTYSPDWFSFGCLIFEMIEGQAPF-------RRRKEMVK 324
VGT Y++PEV+ ++ Y DW+S G ++EM+ G PF K M
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Query: 325 RDEV----DRRVKEDAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEF 380
++ + D + ++A+ C F D GR G E+K+ F
Sbjct: 294 KNSLTFPDDNDISKEAKNLICAFLTDRE----------------VRLGRNGVEEIKRHLF 337
Query: 381 FKSTNWKRLEAGLCDPPFVPDVKRD 405
FK+ W P VPD+ D
Sbjct: 338 FKNDQWAWETLRDTVAPVVPDLSSD 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
+ + +V+G+G FGEV + ++T K+YA + E+ I+ NS +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 714 VVSLAYAYETKDALCLVL 731
VV L YA++ L +V+
Sbjct: 136 VVQLFYAFQDDRYLYMVM 153
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 165/355 (46%), Gaps = 53/355 (14%)
Query: 82 FLDSIENYELEMD-----ENRRLST-----KDIYNEIQPITYKT--FRMYRVLGKGGFGE 129
LD + + L++D +N+ + + I +I+ + K + + +V+G+G FGE
Sbjct: 31 LLDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGE 90
Query: 130 VCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDAL 189
V + +A+ K+YA + E+ I+ NS +VV L A++ L
Sbjct: 91 VQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 150
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIAR--ARFYAAEVLCGLEHLHYIGLVYRDCKPEN 247
+V+ M GGDL + N +D+ A+FY AEV+ L+ +H +GL++RD KP+N
Sbjct: 151 YMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN 204
Query: 248 ILLDDYGHVRISDLGLAVEIPEGESVR--GRVGTVGYMAPEVIDNEK----YTYSPDWFS 301
+LLD +GH++++D G +++ E V VGT Y++PEV+ ++ Y DW+S
Sbjct: 205 MLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 264
Query: 302 FGCLIFEMIEGQAPF-------RRRKEMVKRDEV----DRRVKEDAEKYSCRFSDDXXXX 350
G +FEM+ G PF K M ++ + D + + A+ C F D
Sbjct: 265 VGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDRE-- 322
Query: 351 XXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDVKRD 405
GR G E+KQ FFK+ W P VP++ D
Sbjct: 323 --------------VRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSD 363
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
+ + +V+G+G FGEV + +A+ K+YA + E+ I+ NS +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 714 VVSLAYAYETKDALCLVL 731
VV L A++ L +V+
Sbjct: 137 VVQLFCAFQDDKYLYMVM 154
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 128
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 244
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 245 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 280
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 646 PQPITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK 703
PQP + F+ ++LG+G F V + AT + YA V E+
Sbjct: 2 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 61
Query: 704 QILQKINSRFVVSLAYAYETKDALCLVLT 732
++ +++ F V L + ++ + L L+
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLS 90
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 125
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 241
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 242 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 277
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 69 FVKLYFTFQDDEKLYFGLS 87
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 242
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 243 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 278
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 70 FVKLYFTFQDDEKLYFGLS 88
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 147
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 263
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 264 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 299
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 91 FVKLYFTFQDDEKLYFGLS 109
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 127
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 243
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 244 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 279
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 646 PQPITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK 703
PQP + F+ ++LG+G F V + AT + YA V E+
Sbjct: 1 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 60
Query: 704 QILQKINSRFVVSLAYAYETKDALCLVLT 732
++ +++ F V L + ++ + L L+
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLS 89
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 132
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 248
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 249 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 284
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 76 FVKLYFTFQDDEKLYFGLS 94
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 147
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 263
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 264 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 299
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 91 FVKLYFTFQDDEKLYFGLS 109
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 151
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 267
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 268 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 303
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 95 FVKLYFTFQDDEKLYFGLS 113
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 266
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 267 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 302
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 94 FVKLYFTFQDDEKLYFGLS 112
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 264
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 265 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 300
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 92 FVKLYFTFQDDEKLYFGLS 110
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKS 208
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 264
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 265 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 300
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 92 FVKLYFTFQDDEKLYFGLS 110
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 264
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 265 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 300
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 92 FVKLYFTFQDDEKLYFGLS 110
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 151
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 267
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 268 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 303
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 95 FVKLYFTFQDDEKLYFGLS 113
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 266
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 267 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 302
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 94 FVKLYFTFQDDEKLYFGLS 112
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 266
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 267 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 302
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 94 FVKLYFTFQDDEKLYFGLS 112
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 155
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 271
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 272 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 307
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 99 FVKLYFCFQDDEKLYFGLS 117
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARD----LVE 266
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 267 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 302
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 94 FVKLYFTFQDDEKLYFGLS 112
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G L +I +G FD RFY AE++ LE+LH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
+ S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 266
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 267 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 302
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 94 FVKLYFTFQDDEKLYFGLS 112
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 41/307 (13%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + +V+G+G F EV +++ TG++YA S E+ +L + R+
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ L +A++ ++ L LV+ GGDL + G ARFY AE++ ++ +H
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER--IPAEMARFYLAEIVMAIDSVHR 180
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG--RVGTVGYMAPEVID---- 289
+G V+RD KP+NILLD GH+R++D G +++ +VR VGT Y++PE++
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGG 240
Query: 290 -NEKYTYSP--DWFSFGCLIFEMIEGQAPFR------------RRKEMVKRDEVDRRVKE 334
+Y P DW++ G +EM GQ PF KE + VD V E
Sbjct: 241 GPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPE 300
Query: 335 DAEKYSCRFSDDXXXXXXXXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRLEAGLC 394
+A + R P +RL GR GA + + FF +W L +
Sbjct: 301 EARDFIQRL------------LCPPETRL----GRGGAGDFRTHPFFFGLDWDGLRDSV- 343
Query: 395 DPPFVPD 401
PPF PD
Sbjct: 344 -PPFTPD 349
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + +V+G+G F EV +++ TG++YA S E+ +L + R+
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 714 VVSLAYAYETKDALCLVL 731
+ L +A++ ++ L LV+
Sbjct: 123 ITQLHFAFQDENYLYLVM 140
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD----LVE 264
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 265 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 300
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 33/79 (41%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F + AT + YA V E+ ++ +++ F
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 92 FVKLYFTFQDDEKLYFGLS 110
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + ++ + + EK+ + D
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARD----LVE 266
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 267 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 302
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 94 FVKLYFTFQDDEKLYFGLS 112
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 11/277 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V L + ++ + L L+ G+L +I +G FD RFY AE++ LE+LH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG 153
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGR--VGTVGYMAPEVIDNEK 292
G+++RD KPENILL++ H++I+D G A V PE + R VGT Y++PE++ +
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXX 352
S D ++ GC+I++++ G PFR E + + +++ + + F
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYL----IFQKIIKLEYDFPAAFFPKARDLVE 269
Query: 353 XXXXXSPRSRLGCHCGRYGARELKQAEFFKSTNWKRL 389
RLGC G LK FF+S W+ L
Sbjct: 270 KLLVLDATKRLGCEEME-GYGPLKAHPFFESVTWENL 305
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F+ ++LG+G F V + AT + YA V E+ ++ +++ F
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 714 VVSLAYAYETKDALCLVLT 732
V L + ++ + L L+
Sbjct: 97 FVKLYFTFQDDEKLYFGLS 115
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 23/298 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + +V+G+G FGEV +++ K++A + E+ +L +S++
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ +L YA++ + L LV+ GGDL + E ARFY AE++ ++ +H
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR--VGTVGYMAPEVI---DN 290
+ V+RD KP+NIL+D GH+R++D G +++ E +V+ VGT Y++PE++ +
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 291 EKYTYSP--DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXX 348
K Y P DW+S G ++EM+ G+ PF + E ++ E RF
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHKE----RFQFPTQ 305
Query: 349 XXXXXXXXXSPRSRLGC----HCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
RL C G+ G + K+ FF +W + C+ P++P+V
Sbjct: 306 VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRN--CEAPYIPEV 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + +V+G+G FGEV +++ K++A + E+ +L +S++
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 714 VVSLAYAYETKDALCLVL 731
+ +L YA++ + L LV+
Sbjct: 136 ITTLHYAFQDDNNLYLVM 153
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 146/298 (48%), Gaps = 23/298 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + +V+G+G FGEV +++ T ++YA + E+ +L + ++
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ +L YA++ ++ L LV+ GGDL + + D+AR FY E++ ++ +H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR--FYIGEMVLAIDSIHQ 193
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR--VGTVGYMAPEVI---DN 290
+ V+RD KP+N+LLD GH+R++D G +++ + +V+ VGT Y++PE++ ++
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 291 EKYTYSP--DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXX 348
Y P DW+S G ++EM+ G+ PF + E ++ E RF
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHEE----RFQFPSH 305
Query: 349 XXXXXXXXXSPRSRLGC----HCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
RL C G+ G + K+ FF+ NW+ + + P++PDV
Sbjct: 306 VTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRN--LEAPYIPDV 361
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + +V+G+G FGEV +++ T ++YA + E+ +L + ++
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 714 VVSLAYAYETKDALCLVL 731
+ +L YA++ ++ L LV+
Sbjct: 136 ITALHYAFQDENHLYLVM 153
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 146/298 (48%), Gaps = 23/298 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + +V+G+G FGEV +++ T ++YA + E+ +L + ++
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ +L YA++ ++ L LV+ GGDL + + D+AR FY E++ ++ +H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR--FYIGEMVLAIDSIHQ 209
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR--VGTVGYMAPEVI---DN 290
+ V+RD KP+N+LLD GH+R++D G +++ + +V+ VGT Y++PE++ ++
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 291 EKYTYSP--DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXX 348
Y P DW+S G ++EM+ G+ PF + E ++ E RF
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHEE----RFQFPSH 321
Query: 349 XXXXXXXXXSPRSRLGC----HCGRYGARELKQAEFFKSTNWKRLEAGLCDPPFVPDV 402
RL C G+ G + K+ FF+ NW+ + + P++PDV
Sbjct: 322 VTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRN--LEAPYIPDV 377
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
F + +V+G+G FGEV +++ T ++YA + E+ +L + ++
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 714 VVSLAYAYETKDALCLVL 731
+ +L YA++ ++ L LV+
Sbjct: 152 ITALHYAFQDENHLYLVM 169
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 10/207 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K F LG G F EV + +ATGK++A ES + E +L+KI
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGK--ESSIENEIAVLRKIKH 79
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR-ARFYAAEVLCGLEH 232
+V+L YE+ + L LV+ +++GG+L ++ E GF + A +VL + +
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 233 LHYIGLVYRDCKPENILL---DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVID 289
LH +G+V+RD KPEN+L D+ + ISD GL+ +G+ + GT GY+APEV+
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 195
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ Y+ + D +S G + + ++ G PF
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCGYPPF 222
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 652 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 711
K F LG G F EV + +ATGK++A ES + E +L+KI
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGK--ESSIENEIAVLRKIKH 79
Query: 712 RFVVSLAYAYETKDALCLVLTII 734
+V+L YE+ + L LV+ ++
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLV 102
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 14/236 (5%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
KTF VLG G F EV + R TGK++A +S + E +L+KI
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKH 65
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V+L YE+ LV+ +++GG+L I G D A +VL +++L
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKD---ASLVIQQVLSAVKYL 122
Query: 234 HYIGLVYRDCKPENILL---DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN 290
H G+V+RD KPEN+L ++ + I+D GL+ ++ + + GT GY+APEV+
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYVAPEVLAQ 181
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDD 346
+ Y+ + D +S G + + ++ G PF E ++ ++KE ++ F DD
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETE----SKLFEKIKEGYYEFESPFWDD 233
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 652 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 711
KTF VLG G F EV + R TGK++A +S + E +L+KI
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKH 65
Query: 712 RFVVSLAYAYETKDALCLVLTII 734
+V+L YE+ LV+ ++
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLV 88
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 9/234 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQ--ILQKIN 172
+ + V+GKG F V C R TG+ +A G S ++++ I +
Sbjct: 25 VYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF--DIARARFYAAEVLCGL 230
+V L Y + L +V M+G DL F I + GF A A Y ++L L
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEAL 143
Query: 231 EHLHYIGLVYRDCKPENILL---DDYGHVRISDLGLAVEIPE-GESVRGRVGTVGYMAPE 286
+ H +++RD KPEN+LL ++ V++ D G+A+++ E G GRVGT +MAPE
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYS 340
V+ E Y D + G ++F ++ G PF KE + + + K + ++S
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 653 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQ--ILQKIN 710
+ + V+GKG F V C R TG+ +A G S ++++ I +
Sbjct: 25 VYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 711 SRFVVSLAYAYETKDALCLVLTIIDVMFTCVQ 742
+V L Y + L +V +D C +
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ RVLGKG FGEV C+ + TG+ A + +L E Q+L++++
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E K LV + GG+L I + D AR +VL G+ ++H
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHK 150
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++RI D GL+ + ++ ++GT Y+APEV+
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 209
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKE 321
Y D +S G +++ ++ G PF E
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFNGANE 238
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 641 NPSCFPQ---PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES 697
P F Q I ++ RVLGKG FGEV C+ + TG+ A +
Sbjct: 18 GPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 77
Query: 698 MVLIEKQILQKINSRFVVSLAYAYETKDALCLV 730
+L E Q+L++++ ++ L +E K LV
Sbjct: 78 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 110
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ RVLGKG FGEV C+ + TG+ A + +L E Q+L++++
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E K LV + GG+L I + D AR +VL G+ ++H
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHK 144
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++RI D GL+ + ++ ++GT Y+APEV+ +
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGT 203
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKE 321
Y D +S G +++ ++ G PF E
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANE 232
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 640 TNPSCFPQ---PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 696
P F Q I ++ RVLGKG FGEV C+ + TG+ A +
Sbjct: 11 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK 70
Query: 697 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLV 730
+L E Q+L++++ ++ L +E K LV
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ RVLGKG FGEV C+ + TG+ A + +L E Q+L++++
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E K LV + GG+L I + D AR +VL G+ ++H
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHK 167
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++RI D GL+ + ++ ++GT Y+APEV+ +
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGT 226
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKE 321
Y D +S G +++ ++ G PF E
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANE 255
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 633 TSVPPSE---TNPSCFPQ---PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXX 686
TS P + P F Q I ++ RVLGKG FGEV C+ + TG+ A
Sbjct: 24 TSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS 83
Query: 687 XXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLV 730
+ +L E Q+L++++ ++ L +E K LV
Sbjct: 84 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 127
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ RVLGKG FGEV C+ + TG+ A + +L E Q+L++++
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E K LV + GG+L I + D AR +VL G+ ++H
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHK 168
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++RI D GL+ + ++ ++GT Y+APEV+ +
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGT 227
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKE 321
Y D +S G +++ ++ G PF E
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANE 256
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 633 TSVPPSE---TNPSCFPQ---PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXX 686
TS P + P F Q I ++ RVLGKG FGEV C+ + TG+ A
Sbjct: 25 TSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS 84
Query: 687 XXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLV 730
+ +L E Q+L++++ ++ L +E K LV
Sbjct: 85 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 128
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 8/248 (3%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
VLG G F EV + + T K+ A G + E +L KI +V+L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPNIVALD 82
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
YE+ L L++ +++GG+L I G D +R F +VL +++LH +G+V+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGIVH 139
Query: 241 RDCKPENIL---LDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
RD KPEN+L LD+ + ISD GL+ G + GT GY+APEV+ + Y+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXXXXXXX 357
D +S G + + ++ G PF + +++ + E Y SD
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 358 SPRSRLGC 365
P R C
Sbjct: 260 DPEKRFTC 267
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 8/248 (3%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
VLG G F EV + + T K+ A G + E +L KI +V+L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPNIVALD 82
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
YE+ L L++ +++GG+L I G D +R F +VL +++LH +G+V+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGIVH 139
Query: 241 RDCKPENIL---LDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
RD KPEN+L LD+ + ISD GL+ G + GT GY+APEV+ + Y+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXXXXXXX 357
D +S G + + ++ G PF + +++ + E Y SD
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 358 SPRSRLGC 365
P R C
Sbjct: 260 DPEKRFTC 267
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 113 YKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM------VLIEKQ 166
Y+ + +LG+G V C + T K YA E + L E
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 167 ILQKINSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHI---YNMGGEPGFDIARARFY 222
IL+K++ ++ L YET LV +M G+L ++ + + I RA
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL- 134
Query: 223 AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGY 282
EV+C L H + +V+RD KPENILLDD +++++D G + ++ GE +R GT Y
Sbjct: 135 --EVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSY 189
Query: 283 MAPEVI-----DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
+APE+I DN Y D +S G +++ ++ G PF RK+M+
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 8/248 (3%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
VLG G F EV + + T K+ A G + E +L KI +V+L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPNIVALD 82
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
YE+ L L++ +++GG+L I G D +R F +VL +++LH +G+V+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGIVH 139
Query: 241 RDCKPENIL---LDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
RD KPEN+L LD+ + ISD GL+ G + GT GY+APEV+ + Y+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXXXXXXX 357
D +S G + + ++ G PF + +++ + E Y SD
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 358 SPRSRLGC 365
P R C
Sbjct: 260 DPEKRFTC 267
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ M LG GGFG V + TG+ A +E QI++K+N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK--NRERWCLEIQIMKKLNHPN 73
Query: 176 VVSLAYAYETKDAL---------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEV 226
VVS A E D L L + GGDL+ ++ G R +++
Sbjct: 74 VVS---AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 227 LCGLEHLHYIGLVYRDCKPENILLDDYGHV---RISDLGLAVEIPEGESVRGRVGTVGYM 283
L +LH +++RD KPENI+L +I DLG A E+ +GE VGT+ Y+
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
APE+++ +KYT + D++SFG L FE I G PF
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ M LG GGFG V + TG+ A +E QI++K+N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK--NRERWCLEIQIMKKLNHPN 74
Query: 176 VVSLAYAYETKDAL---------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEV 226
VVS A E D L L + GGDL+ ++ G R +++
Sbjct: 75 VVS---AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 227 LCGLEHLHYIGLVYRDCKPENILLDDYGHV---RISDLGLAVEIPEGESVRGRVGTVGYM 283
L +LH +++RD KPENI+L +I DLG A E+ +GE VGT+ Y+
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
APE+++ +KYT + D++SFG L FE I G PF
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 8/248 (3%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
VLG G F EV + + T K+ A G + E +L KI +V+L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS--MENEIAVLHKIKHPNIVALD 82
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
YE+ L L++ +++GG+L I G D +R F +VL +++LH +G+V+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGIVH 139
Query: 241 RDCKPENIL---LDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
RD KPEN+L LD+ + ISD GL+ G + GT GY+APEV+ + Y+ +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXXXXXXXXXX 357
D +S G + + ++ G PF + +++ + E Y SD
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 358 SPRSRLGC 365
P R C
Sbjct: 260 DPEKRFTC 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ RVLGKG FGEV C+ + TG+ A + +L E Q+L++++
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+ L +E K LV + GG+L I + D AR +VL G+ + H
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYXHK 144
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++RI D GL+ + + ++GT Y+APEV+ +
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL-HGT 203
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKE 321
Y D +S G +++ ++ G PF E
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANE 232
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 642 PSCFPQ---PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM 698
P F Q I ++ RVLGKG FGEV C+ + TG+ A +
Sbjct: 13 PGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 699 VLIEKQILQKINSRFVVSLAYAYETKDALCLV 730
+L E Q+L++++ + L +E K LV
Sbjct: 73 LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLV 104
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 113 YKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM------VLIEKQ 166
Y+ + +LG+G V C + T K YA E + L E
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 167 ILQKINSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHI---YNMGGEPGFDIARARFY 222
IL+K++ ++ L YET LV +M G+L ++ + + I RA
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL- 134
Query: 223 AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGY 282
EV+C L H + +V+RD KPENILLDD +++++D G + ++ GE +R GT Y
Sbjct: 135 --EVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY 189
Query: 283 MAPEVI-----DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
+APE+I DN Y D +S G +++ ++ G PF RK+M+
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 113 YKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM------VLIEKQ 166
Y+ + +LG+G V C + T K YA E + L E
Sbjct: 3 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 167 ILQKINSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHI---YNMGGEPGFDIARARFY 222
IL+K++ ++ L YET LV +M G+L ++ + + I RA
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL- 121
Query: 223 AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGY 282
EV+C L H + +V+RD KPENILLDD +++++D G + ++ GE +R GT Y
Sbjct: 122 --EVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY 176
Query: 283 MAPEVI-----DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
+APE+I DN Y D +S G +++ ++ G PF RK+M+
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 223
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL+++ V++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE + + L+L +++GG+L F + + A + ++L G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDF--LAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D H+++ D GLA EI +G + GT ++APE+++ E
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL+++ V++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE + + L+L +++GG+L F + + A + ++L G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDF--LAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D H+++ D GLA EI +G + GT ++APE+++ E
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL+++ V++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE + + L+L +++GG+L F + + A + ++L G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDF--LAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D H+++ D GLA EI +G + GT ++APE+++ E
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL+++ V++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE + + L+L +++GG+L F + + A + ++L G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDF--LAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D H+++ D GLA EI +G + GT ++APE+++ E
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL+++ V++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE + + L+L +++GG+L F + + A + ++L G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDF--LAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D H+++ D GLA EI +G + GT ++APE+++ E
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
+LGKG FGEV C+ R T + YA S +L E ++L+K++ ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLF 87
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
E + +V + GG+L I D AR +V G+ ++H +V+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI---IKQVFSGITYMHKHNIVH 144
Query: 241 RDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
RD KPENILL+ ++I D GL+ + ++ R+GT Y+APEV+ Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKE--MVKRDEVDR 330
D +S G +++ ++ G PF + E ++KR E +
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 659 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 718
+LGKG FGEV C+ R T + YA S +L E ++L+K++ ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAV-KVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 719 YAYETKDALCLV 730
E + +V
Sbjct: 88 EILEDSSSFYIV 99
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
+LGKG FGEV C+ R T + YA S +L E ++L+K++ ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLF 87
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
E + +V + GG+L I D AR +V G+ ++H +V+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI---IKQVFSGITYMHKHNIVH 144
Query: 241 RDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
RD KPENILL+ ++I D GL+ + ++ R+GT Y+APEV+ Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKE--MVKRDEVDR 330
D +S G +++ ++ G PF + E ++KR E +
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 659 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 718
+LGKG FGEV C+ R T + YA S +L E ++L+K++ ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAV-KVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 719 YAYETKDALCLV 730
E + +V
Sbjct: 88 EILEDSSSFYIV 99
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
+LGKG FGEV C+ R T + YA S +L E ++L+K++ ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLF 87
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
E + +V + GG+L I D AR +V G+ ++H +V+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI---IKQVFSGITYMHKHNIVH 144
Query: 241 RDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
RD KPENILL+ ++I D GL+ + ++ R+GT Y+APEV+ Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKC 203
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKE--MVKRDEVDR 330
D +S G +++ ++ G PF + E ++KR E +
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 659 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 718
+LGKG FGEV C+ R T + YA S +L E ++L+K++ ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAV-KVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 719 YAYETKDALCLV 730
E + +V
Sbjct: 88 EILEDSSSFYIV 99
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 11/262 (4%)
Query: 109 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 168
Q Y + + LG G FG V C +ATG+++ + V E I+
Sbjct: 46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIM 102
Query: 169 QKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF--YAAEV 226
+++ +++L A+E K + L+L ++GG+L ++ + ++ A Y +
Sbjct: 103 NQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQA 158
Query: 227 LCGLEHLHYIGLVYRDCKPENILLD--DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMA 284
GL+H+H +V+ D KPENI+ + V+I D GLA ++ E V+ T + A
Sbjct: 159 CEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAA 218
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFS 344
PE++D E + D ++ G L + ++ G +PF ++ V R E E S
Sbjct: 219 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS 278
Query: 345 DDXXXXXXXXXXXSPRSRLGCH 366
+ PR RL H
Sbjct: 279 PEAKDFIKNLLQKEPRKRLTVH 300
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 646 PQPITYKTFRMY------RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMV 699
PQP+ K +Y LG G FG V C +ATG+++ + V
Sbjct: 39 PQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVA---KFINTPYPLDKYTV 95
Query: 700 LIEKQILQKINSRFVVSLAYAYETKDALCLVLTII 734
E I+ +++ +++L A+E K + L+L +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ + LG G +GEV C+ + TG A +L E +L++++
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E K LV+ + GG+L I F A +VL G +LH
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 236 IGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++I D GL+ G ++ R+GT Y+APEV+ +K
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKK 198
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF--RRRKEMVKRDE 327
Y D +S G +++ ++ G PF + +E++KR E
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVE 235
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 35/80 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
++ + LG G +GEV C+ + TG A +L E +L++++
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 714 VVSLAYAYETKDALCLVLTI 733
++ L +E K LV+ +
Sbjct: 83 IMKLYEFFEDKRNYYLVMEV 102
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 15/223 (6%)
Query: 113 YKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE-----SMVLIEKQI 167
Y+ + V+G+G V C RATG +A + E I
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 168 LQKINSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEV 226
L+++ +++L +YE+ + LV +M G+L ++ + R +
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSL 209
Query: 227 LCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE 286
L + LH +V+RD KPENILLDD +R+SD G + + GE +R GT GY+APE
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 287 VID------NEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
++ + Y D ++ G ++F ++ G PF R++++
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 78 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 195 LEADMWSIGVITYILLSGASPF 216
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 78 LHEVYENKTDVILILELV 95
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ + LG G +GEV C+ + TG A +L E +L++++
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E K LV+ + GG+L I F A +VL G +LH
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 236 IGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++I D GL+ G ++ R+GT Y+APEV+ +K
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKK 181
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF--RRRKEMVKRDE 327
Y D +S G +++ ++ G PF + +E++KR E
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVE 218
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 35/80 (43%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 713
++ + LG G +GEV C+ + TG A +L E +L++++
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 714 VVSLAYAYETKDALCLVLTI 733
++ L +E K LV+ +
Sbjct: 66 IMKLYEFFEDKRNYYLVMEV 85
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 78 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 195 LEADMWSIGVITYILLSGASPF 216
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 78 LHEVYENKTDVILILELV 95
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G IE++ IL+++ +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE + + L+L +++GG+L F + + A + ++L G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDF--LAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D H+++ D GLA EI +G + GT ++APE+++ E
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 2/207 (0%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
T FR+ + +G+G F EV G A + + E +L+++
Sbjct: 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL 89
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF-YAAEVLCGL 230
N V+ ++ + L +VL + + GDL I + + R + Y ++ L
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVID 289
EH+H +++RD KP N+ + G V++ DLGL + + VGT YM+PE I
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF 316
Y + D +S GCL++EM Q+PF
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 9/234 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQ--ILQKIN 172
+ + V+GKG F V C R TG+ +A G S ++++ I +
Sbjct: 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF--DIARARFYAAEVLCGL 230
+V L Y + L +V M+G DL F I + GF A A Y ++L L
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEAL 143
Query: 231 EHLHYIGLVYRDCKPENILL---DDYGHVRISDLGLAVEIPE-GESVRGRVGTVGYMAPE 286
+ H +++RD KP +LL ++ V++ G+A+++ E G GRVGT +MAPE
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYS 340
V+ E Y D + G ++F ++ G PF KE + + + K + ++S
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 9/234 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQ--ILQKIN 172
+ + V+GKG F V C R TG+ +A G S ++++ I +
Sbjct: 27 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF--DIARARFYAAEVLCGL 230
+V L Y + L +V M+G DL F I + GF A A Y ++L L
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEAL 145
Query: 231 EHLHYIGLVYRDCKPENILL---DDYGHVRISDLGLAVEIPE-GESVRGRVGTVGYMAPE 286
+ H +++RD KP +LL ++ V++ G+A+++ E G GRVGT +MAPE
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYS 340
V+ E Y D + G ++F ++ G PF KE + + + K + ++S
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 259
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXG 157
L T+++Y Q + + M LG G F V C+ + TGK YA G
Sbjct: 13 LGTENLY--FQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRG 70
Query: 158 ESMVLIEKQ--ILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFD 215
S IE++ IL++I +++L +E K + L+L +++GG+L F + +
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL-FDF--LAEKESLT 127
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYG----HVRISDLGLAVEIPEGE 271
A + ++L G+ +LH + + D KPENI+L D +++ D G+A +I G
Sbjct: 128 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 187
Query: 272 SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ GT ++APE+++ E D +S G + + ++ G +PF
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 647 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ- 704
Q + + M LG G F V C+ + TGK YA G S IE++
Sbjct: 21 QSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREV 80
Query: 705 -ILQKINSRFVVSLAYAYETKDALCLVLTII 734
IL++I +++L +E K + L+L ++
Sbjct: 81 NILREIRHPNIITLHDIFENKTDVVLILELV 111
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+L ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILILELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 660 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 716
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 717 LAYAYETKDALCLVLTII 734
L YE K + L+L ++
Sbjct: 79 LHEVYENKTDVILILELV 96
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKIN 172
+ M LG G F V C+ + TGK YA G S IE++ IL++I
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
+++L +E K + L+L +++GG+L F + + A + ++L G+ +
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGEL-FDF--LAEKESLTEDEATQFLKQILDGVHY 130
Query: 233 LHYIGLVYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI 288
LH + + D KPENI+L D +++ D G+A +I G + GT ++APE++
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 190
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ E D +S G + + ++ G +PF
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 643 SCFPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLI 701
S F Q + M LG G F V C+ + TGK YA G S I
Sbjct: 3 STFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 702 EKQ--ILQKINSRFVVSLAYAYETKDALCLVLTII 734
E++ IL++I +++L +E K + L+L ++
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELV 97
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKIN 172
+ M LG G F V C+ + TGK YA G S IE++ IL++I
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
+++L +E K + L+L +++GG+L F + + A + ++L G+ +
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGEL-FDF--LAEKESLTEDEATQFLKQILDGVHY 123
Query: 233 LHYIGLVYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI 288
LH + + D KPENI+L D +++ D G+A +I G + GT ++APE++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ E D +S G + + ++ G +PF
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPF 211
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 654 FRMYRVLGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKIN 710
+ M LG G F V C+ + TGK YA G S IE++ IL++I
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 711 SRFVVSLAYAYETKDALCLVLTII 734
+++L +E K + L+L ++
Sbjct: 67 HPNIITLHDIFENKTDVVLILELV 90
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI 167
+ P T K + R LGKGGF + T +++A + + E I
Sbjct: 20 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 79
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAE 225
+ +++ VV +E D + +VL I L + H EP AR++ +
Sbjct: 80 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EARYFMRQ 134
Query: 226 VLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMA 284
+ G+++LH +++RD K N+ L+D V+I D GLA +I +GE + GT Y+A
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 194
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
PEV+ + +++ D +S GC+++ ++ G+ PF
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACX-XXXXXXXXXXXGESMVLIEKQ--ILQKINSRFVVS 178
LG G F V C+ ++TG YA G S IE++ IL++I V++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L YE K + L+ ++ GG+L F + + A + ++L G+ +LH + +
Sbjct: 79 LHEVYENKTDVILIGELVAGGEL-FDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 239 VYRDCKPENILLDDYG----HVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+ D KPENI+L D ++I D GLA +I G + GT ++APE+++ E
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G + + ++ G +PF
Sbjct: 196 LEADMWSIGVITYILLSGASPF 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI 167
+ P T K + R LGKGGF + T +++A + + E I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAE 225
+ +++ VV +E D + +VL I L + H EP AR++ +
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EARYFMRQ 150
Query: 226 VLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMA 284
+ G+++LH +++RD K N+ L+D V+I D GLA +I +GE + GT Y+A
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 210
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
PEV+ + +++ D +S GC+++ ++ G+ PF
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 626 PSSDVMFTSVPPSETNPSCFPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXX 685
PS+ V S P E P P T K + R LGKGGF + T +++A
Sbjct: 17 PSAHVDPKSAPLKEI-PDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 686 XXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTI 733
+ + E I + +++ VV +E D + +VL I
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI 167
+ P T K + R LGKGGF + T +++A + + E I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAE 225
+ +++ VV +E D + +VL I L + H EP AR++ +
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EARYFMRQ 150
Query: 226 VLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMA 284
+ G+++LH +++RD K N+ L+D V+I D GLA +I +GE + GT Y+A
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIA 210
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
PEV+ + +++ D +S GC+++ ++ G+ PF
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 626 PSSDVMFTSVPPSETNPSCFPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXX 685
PS+ V S P E P P T K + R LGKGGF + T +++A
Sbjct: 17 PSAHVDPKSAPLKEI-PDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 686 XXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTI 733
+ + E I + +++ VV +E D + +VL I
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI 167
+ P T K + R LGKGGF + T +++A + + E I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAE 225
+ +++ VV +E D + +VL I L + H EP AR++ +
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EARYFMRQ 150
Query: 226 VLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMA 284
+ G+++LH +++RD K N+ L+D V+I D GLA +I +GE + GT Y+A
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIA 210
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
PEV+ + +++ D +S GC+++ ++ G+ PF
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 626 PSSDVMFTSVPPSETNPSCFPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXX 685
PS+ V S P E P P T K + R LGKGGF + T +++A
Sbjct: 17 PSAHVDPKSAPLKEI-PDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 686 XXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTI 733
+ + E I + +++ VV +E D + +VL I
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGG---DLKFHIYNMGGEPG--FD 215
+L E Q + + + +VS ++ KD L LV+ +++GG D+ HI G D
Sbjct: 60 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV-- 273
+ EVL GLE+LH G ++RD K NILL + G V+I+D G++ + G +
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 274 ----RGRVGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRR 318
+ VGT +MAPEV++ + Y + D +SFG E+ G AP+ +
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGG---DLKFHIYNMGGEPG--FD 215
+L E Q + + + +VS ++ KD L LV+ +++GG D+ HI G D
Sbjct: 55 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 114
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV-- 273
+ EVL GLE+LH G ++RD K NILL + G V+I+D G++ + G +
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
Query: 274 ----RGRVGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
+ VGT +MAPEV++ + Y + D +SFG E+ G AP+ + M
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
LG G FG+V + TG A + E Q L+ ++ L
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
T + +V+ ++GG+L +I G D +R ++L G+++ H +V+
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRHMVVH 139
Query: 241 RDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP-DW 299
RD KPEN+LLD + + +I+D GL+ + +GE +R G+ Y APEVI Y D
Sbjct: 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDI 199
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 200 WSSGVILYALLCGTLPF 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
++ T +LG G FG+V C+ ATG A + V E ++ ++
Sbjct: 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQL 143
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR--FYAAEVLCG 229
+ ++ L A+E+K+ + LV+ ++GG+L I + +++ + ++ G
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII----DESYNLTELDTILFMKQICEG 199
Query: 230 LEHLHYIGLVYRDCKPENILL--DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
+ H+H + +++ D KPENIL D ++I D GLA E ++ GT ++APEV
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV 259
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
++ + ++ D +S G + + ++ G +PF
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 581 GVTLDTTDDSFYSKFNTGSV-SIPWQNEMIETECFKELNVFGENNTPSSDVMFTSVPPSE 639
GV L T + F S N+G S NE E +L + + + +P
Sbjct: 11 GVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAP- 69
Query: 640 TNPSCFPQPI---------TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXX 690
P+ F I ++ T +LG G FG+V C+ ATG A
Sbjct: 70 --PAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAA---KIIKT 124
Query: 691 XXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIID 735
+ V E ++ +++ ++ L A+E+K+ + LV+ +D
Sbjct: 125 RGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKG F V C + TG +A + + E +I +K+ +V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHD 72
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ + + LV ++ GG+L ++ + A A ++L + + H G+V+R
Sbjct: 73 SIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 129
Query: 242 DCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+ KPEN+LL V+++D GLA+E+ + E+ G GT GY++PEV+ + Y+ D
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 299 WFSFGCLIFEMIEGQAPF 316
++ G +++ ++ G PF
Sbjct: 190 IWACGVILYILLVGYPPF 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKG F V C + TG +A + + E +I +K+ +V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHD 72
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ + + LV ++ GG+L ++ + A A ++L + + H G+V+R
Sbjct: 73 SIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 129
Query: 242 DCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+ KPEN+LL V+++D GLA+E+ + E+ G GT GY++PEV+ + Y+ D
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 299 WFSFGCLIFEMIEGQAPF 316
++ G +++ ++ G PF
Sbjct: 190 IWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKG F V C + TG +A + + E +I +K+ +V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHD 71
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ + + LV ++ GG+L ++ + A A ++L + + H G+V+R
Sbjct: 72 SIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 128
Query: 242 DCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+ KPEN+LL V+++D GLA+E+ + E+ G GT GY++PEV+ + Y+ D
Sbjct: 129 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 188
Query: 299 WFSFGCLIFEMIEGQAPF 316
++ G +++ ++ G PF
Sbjct: 189 IWACGVILYILLVGYPPF 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I YK + V+G+G FG VC + RA ++E + L +
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAK-------DVAIKQIESESERKAFIVELRQLSR 58
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+N +V L A + +CLV+ GG L ++ P + A A + + G+
Sbjct: 59 VNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 231 EHLHYI---GLVYRDCKPENILLDDYGHV-RISDLGLAVEIPEGESVRGRVGTVGYMAPE 286
+LH + L++RD KP N+LL G V +I D G A +I + G+ +MAPE
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI--QTHMTNNKGSAAWMAPE 174
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V + Y+ D FS+G +++E+I + PF
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G G VC VR++GK+ A ++ E I++ VV +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYN 215
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+Y D L +V+ + GG L + + + + VL L LH G+++R
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 242 DCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
D K ++ILL G V++SD G ++ E+P + + VGT +MAPE+I Y
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL---VGTPYWMAPELISRLPYGPEV 328
Query: 298 DWFSFGCLIFEMIEGQAPF 316
D +S G ++ EM++G+ P+
Sbjct: 329 DIWSLGIMVIEMVDGEPPY 347
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 20/117 (17%)
Query: 636 PPSETNPSCFPQPITYKTFRM-----------------YRVLGKGGFGEVCACQVRATGK 678
PP +P PQ ++++ FR + +G+G G VC VR++GK
Sbjct: 118 PPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGK 177
Query: 679 MYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIID 735
+ A ++ E I++ VV + +Y D L +V+ ++
Sbjct: 178 LVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I YK + V+G+G FG VC + RA ++E + L +
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAK-------DVAIKQIESESERKAFIVELRQLSR 57
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+N +V L A + +CLV+ GG L ++ P + A A + + G+
Sbjct: 58 VNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 231 EHLHYI---GLVYRDCKPENILLDDYGHV-RISDLGLAVEIPEGESVRGRVGTVGYMAPE 286
+LH + L++RD KP N+LL G V +I D G A +I + G+ +MAPE
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI--QTHMTNNKGSAAWMAPE 173
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V + Y+ D FS+G +++E+I + PF
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G G VC VR++GK+ A ++ E I++ VV +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYN 93
Query: 182 AYETKDALCLVLTIMNGG---DLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
+Y D L +V+ + GG D+ H M E + A VL L LH G+
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLA------VLQALSVLHAQGV 146
Query: 239 VYRDCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
++RD K ++ILL G V++SD G ++ E+P + + VGT +MAPE+I Y
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL---VGTPYWMAPELISRLPYG 203
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G ++ EM++G+ P+
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPY 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K + + +G+G G V ATG+ A + +++ E ++++ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKN 76
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V+ +Y D L +V+ + GG L ++ E D + E L LE L
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDNEK 292
H +++RD K +NILL G V+++D G +I PE VGT +MAPEV+ +
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y D +S G + EMIEG+ P+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K + + +G+G G V ATG+ A + +++ E ++++ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKN 76
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V+ +Y D L +V+ + GG L ++ E D + E L LE L
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEK 292
H +++RD K +NILL G V+++D G +I +S R VGT +MAPEV+ +
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y D +S G + EMIEG+ P+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G G VC VR++GK+ A ++ E I++ VV +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYN 95
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYN--MGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+Y D L +V+ + GG L + + M E + A VL L LH G++
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VLQALSVLHAQGVI 149
Query: 240 YRDCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+RD K ++ILL G V++SD G ++ E+P + + VGT +MAPE+I Y
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL---VGTPYWMAPELISRLPYGP 206
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G ++ EM++G+ P+
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPY 227
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K + + +G+G G V ATG+ A + +++ E ++++ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKN 76
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V+ +Y D L +V+ + GG L ++ E D + E L LE L
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDNEK 292
H +++RD K +NILL G V+++D G +I PE VGT +MAPEV+ +
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y D +S G + EMIEG+ P+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++ + LG G +GEV C+ + T + S +L E +L+ ++
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVT-HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E K LV+ GG+L I + F+ A +VL G+ +LH
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+V+RD KPEN+LL+ ++I D GL+ + ++ R+GT Y+APEV+ +K
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKK 213
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y D +S G ++F ++ G PF
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPF 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKG F V C + TG +A + + E +I +K+ +V L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHD 95
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ + + LV ++ GG+L ++ + A A ++L + + H G+V+R
Sbjct: 96 SIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 152
Query: 242 DCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+ KPEN+LL V+++D GLA+E+ + E+ G GT GY++PEV+ + Y+ D
Sbjct: 153 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 212
Query: 299 WFSFGCLIFEMIEGQAPF 316
++ G +++ ++ G PF
Sbjct: 213 IWACGVILYILLVGYPPF 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ ++ LG G FG V RATG +A + V E Q + +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPT 109
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V+L A+E + + ++ M+GG+L + + + D A Y +V GL H+H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHE 167
Query: 236 IGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKY 293
V+ D KPENI+ +++ D GL + +SV+ GT + APEV + +
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKE-----DAEKYSCRFSDDXX 348
Y D +S G L + ++ G +PF + DE R VK D +S S+D
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGEND----DETLRNVKSCDWNMDDSAFSG-ISEDGK 282
Query: 349 XXXXXXXXXSPRSRLGCH 366
P +R+ H
Sbjct: 283 DFIRKLLLADPNTRMTIH 300
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K + + +G+G G V ATG+ A + +++ E ++++ +
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKN 77
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V+ +Y D L +V+ + GG L ++ E D + E L LE L
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDNEK 292
H +++RD K +NILL G V+++D G +I PE VGT +MAPEV+ +
Sbjct: 134 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y D +S G + EMIEG+ P+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 26/293 (8%)
Query: 52 SYIIDQQPIGRLLFRQFCAEAKPQYHKYNVFLDSIENYELEMDENRRLSTKDIYNEIQPI 111
+YI D G + + + K + L++ L + N+ D+ + Q +
Sbjct: 89 AYIEDHSGNGTFVNTELVGKGKRRP------LNNNSEIALSLSRNKVFVFFDLTVDDQSV 142
Query: 112 TYKTFR----MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VL 162
K R M + LG G GEV R T K A V
Sbjct: 143 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 202
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFY 222
E +IL+K+N ++ + ++ +D +VL +M GG+L + G A + Y
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL---FDKVVGNKRLKEATCKLY 258
Query: 223 AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGT 279
++L +++LH G+++RD KPEN+LL ++I+D G + + E +R GT
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 280 VGYMAPEV---IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK-RDEV 328
Y+APEV + Y + D +S G ++F + G PF + V +D++
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G G VC VR++GK+ A ++ E I++ VV +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYN 84
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYN--MGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+Y D L +V+ + GG L + + M E + A VL L LH G++
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VLQALSVLHAQGVI 138
Query: 240 YRDCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+RD K ++ILL G V++SD G ++ E+P + + VGT +MAPE+I Y
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL---VGTPYWMAPELISRLPYGP 195
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G ++ EM++G+ P+
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPY 216
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 26/293 (8%)
Query: 52 SYIIDQQPIGRLLFRQFCAEAKPQYHKYNVFLDSIENYELEMDENRRLSTKDIYNEIQPI 111
+YI D G + + + K + L++ L + N+ D+ + Q +
Sbjct: 75 AYIEDHSGNGTFVNTELVGKGKRRP------LNNNSEIALSLSRNKVFVFFDLTVDDQSV 128
Query: 112 TYKTFR----MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VL 162
K R M + LG G GEV R T K A V
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFY 222
E +IL+K+N ++ + ++ +D +VL +M GG+L + G A + Y
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL---FDKVVGNKRLKEATCKLY 244
Query: 223 AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGT 279
++L +++LH G+++RD KPEN+LL ++I+D G + + E +R GT
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 280 VGYMAPEV---IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK-RDEV 328
Y+APEV + Y + D +S G ++F + G PF + V +D++
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TGK A + + E +I++ +N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL-FREVRIMKVLNHP 73
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV+ +GG++ F G ARA+F +++ +++ H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEV-FDYLVAHGRMKEKEARAKF--RQIVSAVQYCH 130
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G+ Y APE+ +KY
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF--RRRKEMVKR 325
P D +S G +++ ++ G PF + KE+ +R
Sbjct: 191 -GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G G VC VR++GK+ A ++ E I++ VV +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYN 88
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYN--MGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+Y D L +V+ + GG L + + M E + A VL L LH G++
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA------VLQALSVLHAQGVI 142
Query: 240 YRDCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+RD K ++ILL G V++SD G ++ E+P + + VGT +MAPE+I Y
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL---VGTPYWMAPELISRLPYGP 199
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G ++ EM++G+ P+
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPY 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ ++ LG G FG V RATG +A + V E Q + +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPT 215
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V+L A+E + + ++ M+GG+L + + + D A Y +V GL H+H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHE 273
Query: 236 IGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKY 293
V+ D KPENI+ +++ D GL + +SV+ GT + APEV + +
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKE-----DAEKYSCRFSDDXX 348
Y D +S G L + ++ G +PF + DE R VK D +S S+D
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGEND----DETLRNVKSCDWNMDDSAFSG-ISEDGK 388
Query: 349 XXXXXXXXXSPRSRLGCH 366
P +R+ H
Sbjct: 389 DFIRKLLLADPNTRMTIH 406
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TGK A + + E +I++ +N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL-FREVRIMKVLNHP 73
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV+ +GG++ F G ARA+F +++ +++ H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEV-FDYLVAHGRMKEKEARAKF--RQIVSAVQYCH 130
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G Y APE+ +KY
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF 316
P D +S G +++ ++ G PF
Sbjct: 191 -GPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 85 SIENYELEMDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYAC 144
S+E +L R+L D + + + F + LG+G +G V + TG++ A
Sbjct: 1 SLETVQLRNPPRRQLKKLD-EDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAI 59
Query: 145 XXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFH 204
++ E I+Q+ +S VV +Y L +V+ G +
Sbjct: 60 KQVPVESDLQE-----IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS-- 112
Query: 205 IYNMGGEPGFDIARARFYA----------AEVLCGLEHLHYIGLVYRDCKPENILLDDYG 254
DI R R L GLE+LH++ ++RD K NILL+ G
Sbjct: 113 ----------DIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG 162
Query: 255 HVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQ 313
H +++D G+A ++ + + R V GT +MAPEVI Y D +S G EM EG+
Sbjct: 163 HAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
Query: 314 APF 316
P+
Sbjct: 223 PPY 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G G VC + TGK A ++ E I++ + VV +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR---RELLFNEVVIMRDYHHDNVVDMYS 109
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+Y D L +V+ + GG L ++ + + VL L +LH G+++R
Sbjct: 110 SYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 242 DCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
D K ++ILL G +++SD G ++ E+P+ + + VGT +MAPEVI Y
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL---VGTPYWMAPEVISRLPYGTEV 222
Query: 298 DWFSFGCLIFEMIEGQAPFRRRKEMVK----RDEVDRRVKE 334
D +S G ++ EMI+G+ P+ + RD + RVK+
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TGK A + + E +I++ +N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL-FREVRIMKVLNHP 73
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV+ +GG++ F G ARA+F +++ +++ H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEV-FDYLVAHGRMKEKEARAKF--RQIVSAVQYCH 130
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G+ Y APE+ +KY
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF--RRRKEMVKR 325
P D +S G +++ ++ G PF + KE+ +R
Sbjct: 191 -GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TGK A + + E +I++ +N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL-FREVRIMKVLNHP 73
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV+ +GG++ F G ARA+F +++ +++ H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEV-FDYLVAHGRMKEKEARAKF--RQIVSAVQYCH 130
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G+ Y APE+ +KY
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF 316
P D +S G +++ ++ G PF
Sbjct: 191 -GPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G G VC VR++GK+ A ++ E I++ VV +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYN 138
Query: 182 AYETKDALCLVLTIMNGG---DLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
+Y D L +V+ + GG D+ H M E + A VL L LH G+
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLA------VLQALSVLHAQGV 191
Query: 239 VYRDCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
++RD K ++ILL G V++SD G ++ E+P + + VGT +MAPE+I Y
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL---VGTPYWMAPELISRLPYG 248
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G ++ EM++G+ P+
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPY 270
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 27/144 (18%)
Query: 609 IETECFKELNVFGENNTPSSDVMFTSVPPSETNPSCFPQPITYKTFRM------------ 656
+E F+ EN P PP +P PQ ++++ FR
Sbjct: 21 MENLYFQGARARQENGMPEK-------PPGPRSPQREPQRVSHEQFRAALQLVVDPGDPR 73
Query: 657 -----YRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 711
+ +G+G G VC VR++GK+ A ++ E I++
Sbjct: 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQH 130
Query: 712 RFVVSLAYAYETKDALCLVLTIID 735
VV + +Y D L +V+ ++
Sbjct: 131 ENVVEMYNSYLVGDELWVVMEFLE 154
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L + + LV+ ++NGG+L + + F A + +++ + H+H
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGEL---FERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 236 IGLVYRDCKPENILLDDYG---HVRISDLGLA-VEIPEGESVRGRVGTVGYMAPEVIDNE 291
+G+V+RD KPEN+L D ++I D G A ++ P+ + ++ T+ Y APE+++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN 184
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPFR 317
Y S D +S G +++ M+ GQ PF+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TGK A + + E +I++ +N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL-FREVRIMKVLNHP 73
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV+ +GG++ F G ARA+F +++ +++ H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEV-FDYLVAHGRMKEKEARAKF--RQIVSAVQYCH 130
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G+ Y APE+ +KY
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 295 YSP-DWFSFGCLIFEMIEGQAPF 316
D +S G +++ ++ G PF
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K + + +G+G G V ATG+ A + +++ E ++++ +
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKN 77
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V+ +Y D L +V+ + GG L ++ E D + E L LE L
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDNEK 292
H +++R+ K +NILL G V+++D G +I PE VGT +MAPEV+ +
Sbjct: 134 HSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 193
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y D +S G + EMIEG+ P+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TGK A + + E +I++ +N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL-FREVRIMKVLNHP 66
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV+ +GG++ ++ G + ARA+F +++ +++ H
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE-ARAKF--RQIVSAVQYCH 123
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G+ Y APE+ +KY
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF--RRRKEMVKR 325
P D +S G +++ ++ G PF + KE+ +R
Sbjct: 184 -GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TG+ A + + E +I++ +N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKL-FREVRIMKILNHP 74
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV+ +GG++ F G ARA+F +++ +++ H
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEV-FDYLVAHGRMKEKEARAKF--RQIVSAVQYCH 131
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G+ Y APE+ +KY
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 295 YSP-DWFSFGCLIFEMIEGQAPF 316
D +S G +++ ++ G PF
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TGK A + + E +I + +N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL-FREVRIXKVLNHP 73
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L LV +GG++ F G ARA+F +++ +++ H
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEV-FDYLVAHGRXKEKEARAKF--RQIVSAVQYCH 130
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G Y APE+ +KY
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF--RRRKEMVKR 325
P D +S G +++ ++ G PF + KE+ +R
Sbjct: 191 -GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 118 MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEKQILQKIN 172
M + LG G GEV R T K A V E +IL+K+N
Sbjct: 13 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
++ + ++ +D +VL +M GG+L + G A + Y ++L +++
Sbjct: 73 HPCIIKIKNFFDAEDYY-IVLELMEGGEL---FDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 233 LHYIGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEV-- 287
LH G+++RD KPEN+LL ++I+D G + + E +R GT Y+APEV
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 288 -IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK-RDEV 328
+ Y + D +S G ++F + G PF + V +D++
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKGGF + T +++A + +E I + + + VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 182 AYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E D + +VL + L + H EP AR+Y +++ G ++LH ++
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARYYLRQIVLGCQYLHRNRVI 143
Query: 240 YRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+RD K N+ L++ V+I D GLA ++ +GE + GT Y+APEV+ + +++ D
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
Query: 299 WFSFGCLIFEMIEGQAPF 316
+S GC+++ ++ G+ PF
Sbjct: 204 VWSIGCIMYTLLVGKPPF 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 118 MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEKQILQKIN 172
M + LG G GEV R T K A V E +IL+K+N
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
++ + ++ +D +VL +M GG+L + G A + Y ++L +++
Sbjct: 74 HPCIIKIKNFFDAEDYY-IVLELMEGGEL---FDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 233 LHYIGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEV-- 287
LH G+++RD KPEN+LL ++I+D G + + E +R GT Y+APEV
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 288 -IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK-RDEV 328
+ Y + D +S G ++F + G PF + V +D++
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 118 MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEKQILQKIN 172
M + LG G GEV R T K A V E +IL+K+N
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
++ + ++ +D +VL +M GG+L + G A + Y ++L +++
Sbjct: 74 HPCIIKIKNFFDAEDYY-IVLELMEGGEL---FDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 233 LHYIGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEV-- 287
LH G+++RD KPEN+LL ++I+D G + + E +R GT Y+APEV
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 288 -IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK-RDEV 328
+ Y + D +S G ++F + G PF + V +D++
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 118 MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEKQILQKIN 172
M + LG G GEV R T K A V E +IL+K+N
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
++ + ++ +D +VL +M GG+L + G A + Y ++L +++
Sbjct: 74 HPCIIKIKNFFDAEDYY-IVLELMEGGEL---FDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 233 LHYIGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEV-- 287
LH G+++RD KPEN+LL ++I+D G + + E +R GT Y+APEV
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 288 -IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK-RDEV 328
+ Y + D +S G ++F + G PF + V +D++
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKGGF + T +++A + +E I + + + VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 182 AYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E D + +VL + L + H EP AR+Y +++ G ++LH ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARYYLRQIVLGCQYLHRNRVI 139
Query: 240 YRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+RD K N+ L++ V+I D GLA ++ +GE + GT Y+APEV+ + +++ D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 299 WFSFGCLIFEMIEGQAPF 316
+S GC+++ ++ G+ PF
Sbjct: 200 VWSIGCIMYTLLVGKPPF 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKGGF + T +++A + +E I + + + VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 182 AYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E D + +VL + L + H EP AR+Y +++ G ++LH ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARYYLRQIVLGCQYLHRNRVI 139
Query: 240 YRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+RD K N+ L++ V+I D GLA ++ +GE + GT Y+APEV+ + +++ D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 299 WFSFGCLIFEMIEGQAPF 316
+S GC+++ ++ G+ PF
Sbjct: 200 VWSIGCIMYTLLVGKPPF 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+++Y +GKG F V C TG YA + + E +I + +
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER-EARICRLLKHSN 64
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L + + LV ++ GG+L ++ + A A ++L + H H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNE 291
+G+V+RD KPEN+LL V+++D GLA+E+ + ++ G GT GY++PEV+ E
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
Y D ++ G +++ ++ G PF
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKGGF + T +++A + +E I + + + VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 182 AYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E D + +VL + L + H EP AR+Y +++ G ++LH ++
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARYYLRQIVLGCQYLHRNRVI 161
Query: 240 YRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+RD K N+ L++ V+I D GLA ++ +GE + GT Y+APEV+ + +++ D
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
Query: 299 WFSFGCLIFEMIEGQAPF 316
+S GC+++ ++ G+ PF
Sbjct: 222 VWSIGCIMYTLLVGKPPF 239
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 118 MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEKQILQKIN 172
M + LG G GEV R T K A V E +IL+K+N
Sbjct: 20 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 173 SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEH 232
++ + ++ +D +VL +M GG+L + G A + Y ++L +++
Sbjct: 80 HPCIIKIKNFFDAEDYY-IVLELMEGGEL---FDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 233 LHYIGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEV-- 287
LH G+++RD KPEN+LL ++I+D G + + E +R GT Y+APEV
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 195
Query: 288 -IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK-RDEV 328
+ Y + D +S G ++F + G PF + V +D++
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKGGF + T +++A + +E I + + + VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 182 AYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E D + +VL + L + H EP AR+Y +++ G ++LH ++
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARYYLRQIVLGCQYLHRNRVI 137
Query: 240 YRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+RD K N+ L++ V+I D GLA ++ +GE + GT Y+APEV+ + +++ D
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
Query: 299 WFSFGCLIFEMIEGQAPF 316
+S GC+++ ++ G+ PF
Sbjct: 198 VWSIGCIMYTLLVGKPPF 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G++ + + FD R Y E+ L + H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALSYCHS 131
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 190
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LGKGGF + T +++A + +E I + + + VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 182 AYETKDALCLVLTIMNGGDL-KFHIYNMG-GEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E D + +VL + L + H EP AR+Y +++ G ++LH ++
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARYYLRQIVLGCQYLHRNRVI 163
Query: 240 YRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
+RD K N+ L++ V+I D GLA ++ +GE + GT Y+APEV+ + +++ D
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
Query: 299 WFSFGCLIFEMIEGQAPF 316
+S GC+++ ++ G+ PF
Sbjct: 224 VWSIGCIMYTLLVGKPPF 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++++ LGKG F V C TG+ YA + + E +I + +
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPN 64
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L + + LV ++ GG+L ++ + A A ++L + H H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 236 IGLVYRDCKPENILLDDYGH---VRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNE 291
G+V+RD KPEN+LL V+++D GLA+E+ + ++ G GT GY++PEV+ +
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
Y D ++ G +++ ++ G PF
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G++ + + FD R Y E+ L + H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALSYCHS 131
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LXGTLDYLPPEMIEGRMHDE 190
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++++ LGKG F V C TG+ YA + + E +I + +
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPN 64
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L + + LV ++ GG+L ++ + A A ++L + H H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 236 IGLVYRDCKPENILLDDYGH---VRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNE 291
G+V+RD KPEN+LL V+++D GLA+E+ + ++ G GT GY++PEV+ +
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
Y D ++ G +++ ++ G PF
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F +GKG FGEV T K+ A + E +L + +S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPY 81
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG-FDIARARFYAAEVLCGLEHLH 234
V +Y L +++ + GG + EPG D + E+L GL++LH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 136
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEKY 293
++RD K N+LL ++G V+++D G+A ++ + + R VGT +MAPEVI Y
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
D +S G E+ G+ P M
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPM 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHDE 185
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 152
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 211
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPF 232
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F +GKG FGEV T K+ A + E +L + +S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPY 66
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG-FDIARARFYAAEVLCGLEHLH 234
V +Y L +++ + GG + EPG D + E+L GL++LH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 121
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEKY 293
++RD K N+LL ++G V+++D G+A ++ + + R VGT +MAPEVI Y
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
D +S G E+ G+ P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F +GKG FGEV T K+ A + E +L + +S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPY 66
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG-FDIARARFYAAEVLCGLEHLH 234
V +Y L +++ + GG + EPG D + E+L GL++LH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 121
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEKY 293
++RD K N+LL ++G V+++D G+A ++ + + R VGT +MAPEVI Y
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
D +S G E+ G+ P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 202
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPF 223
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F +GKG FGEV T K+ A + E +L + +S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPY 86
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG-FDIARARFYAAEVLCGLEHLH 234
V +Y L +++ + GG + EPG D + E+L GL++LH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 141
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEKY 293
++RD K N+LL ++G V+++D G+A ++ + + R VGT +MAPEVI Y
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
D +S G E+ G+ P M
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPM 230
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 12/254 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
T F + R LGKG FG V + + + A E + E +I +
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
++ + + + + L+L G+L + G FD R+ + E+ L
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALH 128
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV--GTVGYMAPEVID 289
+ H +++RD KPEN+L+ G ++I+D G +V P S+R R GT+ Y+ PE+I+
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIE 185
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXX 349
+ + D + G L +E + G PF + E RR+ K+ SD
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPF----DSPSHTETHRRIVNVDLKFPPFLSDGSKD 241
Query: 350 XXXXXXXXSPRSRL 363
P RL
Sbjct: 242 LISKLLRYHPPQRL 255
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 164 EKQILQKINSRFVVSLAYAYE--TKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
E IL+K++ VV L + +D L +V ++N G + + +ARF
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKPLSEDQARF 141
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTV 280
Y +++ G+E+LHY +++RD KP N+L+ + GH++I+D G++ E ++ + VGT
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 281 GYMAPEVIDNEKYTYSP---DWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAE 337
+MAPE + + +S D ++ G ++ + GQ PF + M ++ + E +
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD 261
Query: 338 KYSCRFSDDXXXXXXXXXXXSPRSRL 363
+ ++D +P SR+
Sbjct: 262 QPD--IAEDLKDLITRMLDKNPESRI 285
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 152
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKYT 294
+++RD KPEN+LL G ++I+D G +V P S R + GT+ Y+ PE+I+ +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDDLCGTLDYLPPEMIEGRMHD 210
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 127
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDE 186
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTE-LCGTLDYLPPEMIEGRMHDE 185
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHDE 185
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDE 185
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 129
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 188
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 185
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 128
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKYT 294
+++RD KPEN+LL G ++I+D G +V P S R + GT+ Y+ PE+I+ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRXXLCGTLDYLPPEMIEGRMHD 186
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPF 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ E F++ + A + G+++LH
Sbjct: 82 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPE---GESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA E G++ +MAPEVI D+
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 234
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 129
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHDE 188
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 131
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEXIEGRXHDE 190
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Query: 119 YRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVS 178
Y +G+G G VC + + +G+ A ++ E I++ VV
Sbjct: 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR---RELLFNEVVIMRDYQHFNVVE 106
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
+ +Y + L +++ + GG L ++ + + + VL L +LH G+
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQGV 162
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEKYTYSP 297
++RD K ++ILL G V++SD G +I + R VGT +MAPEVI Y
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 298 DWFSFGCLIFEMIEGQAPF 316
D +S G ++ EM++G+ P+
Sbjct: 223 DIWSLGIMVIEMVDGEPPY 241
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 131
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDE 190
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 127
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKYT 294
+++RD KPEN+LL G ++I+D G +V P S R + GT+ Y+ PE+I+ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDTLCGTLDYLPPEMIEGRMHD 185
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TG+ A + + E +I++ +N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKL-FREVRIMKILNHP 74
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L L++ +GG++ F G AR++F +++ +++ H
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEV-FDYLVAHGRMKEKEARSKF--RQIVSAVQYCH 131
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G Y APE+ +KY
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 295 YSP-DWFSFGCLIFEMIEGQAPF 316
D +S G +++ ++ G PF
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDE 185
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 131
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 190
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 12/254 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
T F + R LGKG FG V + + + A E + E +I +
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
++ + + + + L+L G+L + G FD R+ + E+ L
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALH 129
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV--GTVGYMAPEVID 289
+ H +++RD KPEN+L+ G ++I+D G +V P S+R R GT+ Y+ PE+I+
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIE 186
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXX 349
+ + D + G L +E + G PF + E RR+ K+ SD
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPF----DSPSHTETHRRIVNVDLKFPPFLSDGSKD 242
Query: 350 XXXXXXXXSPRSRL 363
P RL
Sbjct: 243 LISKLLRYHPPQRL 256
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
T + F + R LGKG FG V + R + + A E + E +I +
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
++ L + + L+L G + + + FD R Y E+ L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANALS 126
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNE 291
+ H +++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGR 185
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
+ D +S G L +E + G PF
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
F + R +G G FG V CQ K YA + IE IL+KI +
Sbjct: 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAK----IEADILKKIQND 91
Query: 175 FVVSLAYA-YETK----DALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
+ + Y K D +CL+ + G + I GF I + Y E+L
Sbjct: 92 DINNNNIVKYHGKFMYYDHMCLIFEPL--GPSLYEIITRNNYNGFHIEDIKLYCIEILKA 149
Query: 230 LEHLHYIGLVYRDCKPENILLDD-------YGHVRISDLGLAVEIPEGESVRGR------ 276
L +L + L + D KPENILLDD R++D G ++I +S +
Sbjct: 150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTD-GKKIQIYRTKSTGIKLIDFGC 208
Query: 277 -----------VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
+ T Y APEVI N + S D +SFGC++ E+ G FR + M
Sbjct: 209 ATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM 265
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 12/254 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
T F + R LGKG FG V + + + A E + E +I +
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
++ + + + + L+L G+L + G FD R+ + E+ L
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALH 128
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV--GTVGYMAPEVID 289
+ H +++RD KPEN+L+ G ++I+D G +V P S+R R GT+ Y+ PE+I+
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIE 185
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDDXXX 349
+ + D + G L +E + G PF + E RR+ K+ SD
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPF----DSPSHTETHRRIVNVDLKFPPFLSDGSKD 241
Query: 350 XXXXXXXXSPRSRL 363
P RL
Sbjct: 242 LISKLLRYHPPQRL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 125
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 184
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPF 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 129
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 188
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
L T+++Y + ++++ LGKG F V C G+ YA +
Sbjct: 13 LGTENLYFQ------SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ 66
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
+ E +I + + +V L + + L+ ++ GG+L ++ + A
Sbjct: 67 KLER-EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEAD 122
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVR- 274
A ++L + H H +G+V+RD KPEN+LL V+++D GLA+E+ EGE
Sbjct: 123 ASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAW 181
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
G GT GY++PEV+ + Y D ++ G +++ ++ G PF
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
T + F + R LGKG FG V + R + + A E + E +I +
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
++ L + + L+L G + + + FD R Y E+ L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANALS 126
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDN 290
+ H +++RD KPEN+LL G ++I+D G +V P S R + GT+ Y+ PE+I+
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDTLCGTLDYLPPEMIEG 184
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ D +S G L +E + G PF
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+R+ + +GKG F +V + TG+ A + + E +I++ +N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKL-FREVRIMKILNHP 71
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
+V L ET+ L L++ +GG++ F G AR++F +++ +++ H
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEV-FDYLVAHGRMKEKEARSKF--RQIVSAVQYCH 128
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD K EN+LLD +++I+D G + E G + G+ Y APE+ +KY
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 295 YSP-DWFSFGCLIFEMIEGQAPF 316
D +S G +++ ++ G PF
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 114 KTFRMYRVLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI--LQK 170
K + ++ +G GGF +V AC + TG+M A G + I+ +I L+
Sbjct: 10 KYYELHETIGTGGFAKVKLACHI-LTGEMVAIKIMDKNTL----GSDLPRIKTEIEALKN 64
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+ + + L + ET + + +VL GG+L +I + + R +++ +
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIIS---QDRLSEEETRVVFRQIVSAV 121
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES---VRGRVGTVGYMAPEV 287
++H G +RD KPEN+L D+Y +++ D GL + P+G ++ G++ Y APE+
Sbjct: 122 AYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPEL 180
Query: 288 IDNEKYTYS-PDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKY 339
I + Y S D +S G L++ ++ G PF M ++ R K D K+
Sbjct: 181 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI-MRGKYDVPKW 232
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXX-XXXXXGESMVLIEK---------QILQ 169
R LG G +GEV C+ + A + IEK +L+
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++ ++ L +E K LV GG+L I N FD A ++L G
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSG 158
Query: 230 LEHLHYIGLVYRDCKPENILLDDYG---HVRISDLGLAVEIPEGESVRGRVGTVGYMAPE 286
+ +LH +V+RD KPENILL++ +++I D GL+ + +R R+GT Y+APE
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPE 218
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF--RRRKEMVKRDE 327
V+ +KY D +S G +++ ++ G PF + ++++K+ E
Sbjct: 219 VL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTX-LCGTLDYLPPEMIEGRMHDE 185
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 130
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 189
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPF 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 129
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKYT 294
+++RD KPEN+LL G ++I+D G +V P S R + GT+ Y+ PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRXXLCGTLDYLPPEMIEGRMHD 187
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 126
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKYT 294
+++RD KPEN+LL G ++I+D G +V P S R + GT+ Y+ PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRXXLCGTLDYLPPEMIEGRMHD 184
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F +GKG FGEV T ++ A + E +L + +S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSSY 82
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V +Y L +++ + GG + G F IA E+L GL++LH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGS-ALDLLRAGPFDEFQIAT---MLKEILKGLDYLHS 138
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEKYT 294
++RD K N+LL + G V+++D G+A ++ + + R VGT +MAPEVI Y
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 295 YSPDWFSFGCLIFEMIEGQAP 315
D +S G E+ +G+ P
Sbjct: 199 SKADIWSLGITAIELAKGEPP 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 129
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV-GTVGYMAPEVIDNEKYT 294
+++RD KPEN+LL G ++I+D G +V P S R + GT+ Y+ PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDDLCGTLDYLPPEMIEGRMHD 187
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + A E + E +I +
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 123
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G +V P GT+ Y+ PE+I+ +
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 182
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPF 203
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++++ LGKG F V C G+ YA + + E +I + +
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER-EARICRLLKHPN 71
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L + + L+ ++ GG+L ++ + A A ++L + H H
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIPEGESVR--GRVGTVGYMAPEVIDN 290
+G+V+R+ KPEN+LL V+++D GLA+E+ EGE G GT GY++PEV+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ Y D ++ G +++ ++ G PF
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 128
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I++ G +V P GT+ Y+ PE+I+ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 187
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPF 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG+V + + TG A + E Q L+ ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
T +V+ ++GG+L +I G + AR ++L +++ H +V+R
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP-DWF 300
D KPEN+LLD + + +I+D GL+ + +GE +R G+ Y APEVI Y D +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 301 SFGCLIFEMIEGQAPF 316
S G +++ ++ G PF
Sbjct: 196 SCGVILYALLCGTLPF 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+++ + LG+G FG+V TG+ A + + E L+ +
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
++ L ++KD + +V+ G +L +I AR + +++ +E+ H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIE-YAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH 120
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD KPEN+LLD++ +V+I+D GL+ + +G ++ G+ Y APEVI + Y
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF 316
P D +S G +++ M+ + PF
Sbjct: 181 -GPEVDVWSCGVILYVMLCRRLPF 203
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TKD L +V G L H++ E F + + A + G+++LH
Sbjct: 94 ILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK 151
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA + V G+V +MAPEVI DN
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
+++ D +S+G +++E++ G+ P+ + RD++
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPY---SHINNRDQI 246
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG+V + + TG A + E Q L+ ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
T +V+ ++GG+L +I G + AR ++L +++ H +V+R
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP-DWF 300
D KPEN+LLD + + +I+D GL+ + +GE +R G+ Y APEVI Y D +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 301 SFGCLIFEMIEGQAPF 316
S G +++ ++ G PF
Sbjct: 196 SCGVILYALLCGTLPF 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 129
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I++ G +V P GT+ Y+ PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDE 188
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+++ + LG+G FG+V TG+ A + + E L+ +
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
++ L ++KD + +V+ G +L +I AR + +++ +E+ H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH 129
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD KPEN+LLD++ +V+I+D GL+ + +G ++ G+ Y APEVI + Y
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF 316
P D +S G +++ M+ + PF
Sbjct: 190 -GPEVDVWSCGVILYVMLCRRLPF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+++ + LG+G FG+V TG+ A + + E L+ +
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
++ L ++KD + +V+ G +L +I AR + +++ +E+ H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH 130
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD KPEN+LLD++ +V+I+D GL+ + +G ++ G+ Y APEVI + Y
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 295 YSP--DWFSFGCLIFEMIEGQAPF 316
P D +S G +++ M+ + PF
Sbjct: 191 -GPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 86 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPE---GESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA E G++ +MAPEVI D
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 238
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+++ + LG+G FG+V TG+ A + + E L+ +
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
++ L ++KD + +V+ G +L +I AR + +++ +E+ H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIE-YAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH 124
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
+V+RD KPEN+LLD++ +V+I+D GL+ + +G ++ G+ Y APEVI + Y
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 295 YSP-DWFSFGCLIFEMIEGQAPF 316
D +S G +++ M+ + PF
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPF 207
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ E F++ + A + G+++LH
Sbjct: 70 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D+
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y T L +V G L H++ E F++ + A + G+++LH
Sbjct: 82 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPE---GESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA E G++ +MAPEVI D+
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPE---GESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA E G++ +MAPEVI D
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 218
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + R LGKG FG V + + + + A E + E +I +
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + + L+L G + + + FD R Y E+ L + H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS 127
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
+++RD KPEN+LL G ++I+D G + P GT+ Y+ PE+I+ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT-TLSGTLDYLPPEMIEGRMHDE 186
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G L +E + G+ PF
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF 207
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPE---GESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA E G++ +MAPEVI D
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 246
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 110 PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ 169
P + + F+ +G+G +G V + + TG++ A S + E +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLK 59
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++N +V L T++ L LV ++ KF + G + + Y ++L G
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQG 117
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPE 286
L H +++RD KPEN+L++ G ++++D GLA G VR V T+ Y APE
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 287 VIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
++ K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
R +G G +G VC+ A + E ++L+ + V+ L
Sbjct: 34 RPVGSGAYGSVCSA-YDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 180 ------AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
A + E + LV T+M G DL N+ +F ++L GL+++
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-GADLN----NIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EK 292
H G+++RD KP N+ +++ +RI D GLA + E + G V T Y APE++ N
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMH 205
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y + D +S GC++ E+++G+A F
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ LG G + V + TG A S + E +++++
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT--PSTAIREISLMKELKHEN 64
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHI--YNMGGEP-GFDIARARFYAAEVLCGLEH 232
+V L T++ L LV M+ DLK ++ +G P G ++ +++ ++L GL
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 233 LHYIGLVYRDCKPENILLDDYGHVRISDLGL--AVEIPEGESVRGRVGTVGYMAPEVI-D 289
H +++RD KP+N+L++ G +++ D GL A IP + V T+ Y AP+V+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV-NTFSSEVVTLWYRAPDVLMG 182
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ Y+ S D +S GC++ EMI G+ F
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 28/251 (11%)
Query: 104 IYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLI 163
+Y ++QP+ G G +G VC+ TG A +
Sbjct: 26 VYRDLQPV-----------GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR-AYR 73
Query: 164 EKQILQKINSRFVVSLAYAY---ETKDALC---LVLTIMNGGDL-KFHIYNMGGEPGFDI 216
E ++L+ + V+ L + ET D LV+ M G DL K + GE
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGE----- 127
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR 276
R +F ++L GL ++H G+++RD KP N+ +++ ++I D GLA + + G
Sbjct: 128 DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA--DSEMXGX 185
Query: 277 VGTVGYMAPEVIDN-EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKED 335
V T Y APEVI N +YT + D +S GC++ EMI G+ F+ + + E+ +
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245
Query: 336 AEKYSCRFSDD 346
++ R D
Sbjct: 246 PAEFVQRLQSD 256
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
+++ + +VS+ E D LV+ + G L +I + G + A + ++L G
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDG 123
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR--VGTVGYMAPEV 287
++H H + +V+RD KP+NIL+D ++I D G+A + E + +GTV Y +PE
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
E D +S G +++EM+ G+ PF
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + LG+G V C+ + T K YA + +V E +L +++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPN 109
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +ET + LVL ++ GG+L I G D A A ++L + +LH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADA---VKQILEAVAYLHE 166
Query: 236 IGLVYRDCKPENILLDDYGH---VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
G+V+RD KPEN+L ++I+D GL+ + ++ GT GY APE++
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y D +S G + + ++ G PF
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 8/205 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
++++ LGKG F V C + + YA + + E +I + +
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPN 91
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V L + + LV ++ GG+L ++ + A A ++L + H+H
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 236 IGLVYRDCKPENILLDDY---GHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNE 291
+V+RD KPEN+LL V+++D GLA+E+ E ++ G GT GY++PEV+ +
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
Y D ++ G +++ ++ G PF
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG+G FG+V T + A V E L+ + ++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYN---MGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
T + +V+ GG+L +I M + G R + +++C +E+ H +
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEG------RRFFQQIICAIEYCHRHKI 129
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP- 297
V+RD KPEN+LLDD +V+I+D GL+ + +G ++ G+ Y APEVI+ + Y
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 298 DWFSFGCLIFEMIEGQAPF 316
D +S G +++ M+ G+ PF
Sbjct: 190 DVWSCGIVLYVMLVGRLPF 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 90 ELEMDENRRLSTKDIYNEIQPITY---KTFRMYRVLGKGGFGEVCACQVRATGKMYACXX 146
ELE+DE +R + + Q + F LG G G V + +G + A
Sbjct: 6 ELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL 65
Query: 147 XXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY 206
+ ++ E Q+L + NS ++V A+ + + + + M+GG L +
Sbjct: 66 IHLEIKPAIRNQ--IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 123
Query: 207 NMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE 266
G P + + + L L H I ++RD KP NIL++ G +++ D G++ +
Sbjct: 124 KAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ 181
Query: 267 IPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + + VGT YM+PE + Y+ D +S G + EM G+ P
Sbjct: 182 LIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F++ +LGKG F V + TG A V E +I ++
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L +E + + LVL + + G++ ++ N +P F AR + +++ G+ +LH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KP-FSENEARHFMHQIITGMLYLHS 130
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVGTVGYMAPEVIDNEKYT 294
G+++RD N+LL +++I+D GLA ++ E GT Y++PE+ +
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHG 190
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S GC+ + ++ G+ PF
Sbjct: 191 LESDVWSLGCMFYTLLIGRPPF 212
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 61
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPF 316
K Y+ + D +S GC+ EM+ +A F
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 110 PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ 169
P + + F+ +G+G +G V + + TG++ A S + E +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLK 59
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++N +V L T++ L LV ++ KF + G + + Y ++L G
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQG 117
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPE 286
L H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 287 VIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
++ K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 110 PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ 169
P + + F+ +G+G +G V + + TG++ A S + E +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLK 59
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++N +V L T++ L LV ++ KF + G + + Y ++L G
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQG 117
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPE 286
L H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 287 VIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
++ K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 68
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 184
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 60
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KPEN+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 176
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 110 PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ 169
P + + F+ +G+G +G V + + TG++ A S + E +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLK 60
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++N +V L T++ L LV ++ KF + G + + Y ++L G
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQG 118
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPE 286
L H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 287 VIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
++ K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ + + LG+G +GEV R T + A + E I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEIXINKMLNHEN 65
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
VV + L L +GG+L I G P D R + +++ G+ +LH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHG 122
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDNEK 292
IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 293 YTYSP-DWFSFGCLIFEMIEGQAPF 316
+ P D +S G ++ M+ G+ P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ + + LG+G +GEV R T + A + E I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEIXINKMLNHEN 65
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
VV + L L +GG+L I G P D R + +++ G+ +LH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHG 122
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDNEK 292
IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++ +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 293 YTYSP-DWFSFGCLIFEMIEGQAPF 316
+ P D +S G ++ M+ G+ P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ + + LG+G +GEV R T + A + E I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEIXINKMLNHEN 66
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
VV + L L +GG+L I G P D R + +++ G+ +LH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHG 123
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDNEK 292
IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++ +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 293 YTYSP-DWFSFGCLIFEMIEGQAPF 316
+ P D +S G ++ M+ G+ P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 62
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KPEN+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 178
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 59
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ DLK + G + + Y ++L GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLK-DFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KPEN+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 175
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 68 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 125
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 110 PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ 169
P + + F+ +G+G +G V + + TG++ A S + E +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLK 60
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++N +V L T++ L LV ++ DLK + + G + + Y ++L G
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQG 118
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPE 286
L H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 287 VIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
++ K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 60
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KPEN+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 176
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 61
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
R +G G +G VC+ A + E ++L+ + V+ L
Sbjct: 34 RPVGSGAYGSVCSA-YDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 180 ------AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
A + E + LV T+M G DL N+ +F ++L GL+++
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-GADLN----NIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EK 292
H G+++RD KP N+ +++ +RI D GLA + E + G V T Y APE++ N
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMH 205
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y + D +S GC++ E+++G+A F
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALF 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 223
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 223
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 59
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 175
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ + F+ +G+G +G V + + TG++ A S + E +L++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKE 62
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGL 120
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEV 287
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE+
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEI 178
Query: 288 IDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
+ K Y+ + D +S GC+ EM+ +A F
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 218
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 59
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 175
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
K Y+ + D +S GC+ EM+ +A F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 93 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 150
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A G++ E QI++K++ +V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------GKAFKNRELQIMRKLDHCNIVRL 78
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y TK L +V G L H++ + E F++ + A + G+++LH
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 246
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 59
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 175
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 61
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 59
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 175
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 62
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 178
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
R +G G +G VC+ A + E ++L+ + V+ L
Sbjct: 26 RPVGSGAYGSVCSA-YDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 180 ------AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
A + E + LV T+M G DL N+ +F ++L GL+++
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLM-GADLN----NIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EK 292
H G+++RD KP N+ +++ +RI D GLA + E + G V T Y APE++ N
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMH 197
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPF 316
Y + D +S GC++ E+++G+A F
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALF 221
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 60
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 176
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
S + E +L++++ +VSL ++ L LV M DLK + + G ++
Sbjct: 64 STAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQ 120
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG--- 275
+ Y ++L G+ H H +++RD KP+N+L++ G ++++D GLA G VR
Sbjct: 121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTH 178
Query: 276 RVGTVGYMAPEVI-DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T+ Y AP+V+ ++KY+ S D +S GC+ EMI G+ F
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
S + E +L++++ +VSL ++ L LV M DLK + + G ++
Sbjct: 64 STAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQ 120
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG--- 275
+ Y ++L G+ H H +++RD KP+N+L++ G ++++D GLA G VR
Sbjct: 121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTH 178
Query: 276 RVGTVGYMAPEVI-DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T+ Y AP+V+ ++KY+ S D +S GC+ EMI G+ F
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 60
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL 176
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPF 316
K Y+ + D +S GC+ EM+ +A F
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGV-PSTAIREISLLKELNH 61
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 62
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 119
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS-RFVVSLA 180
LG+G F V C ++TG+ YA + +L E +L+ S V++L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDC-RAEILHEIAVLELAKSCPRVINLH 95
Query: 181 YAYETKDALCLVLTIMNGGDLKF----HIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
YE + L+L GG++ + M E D+ R ++L G+ +LH
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN--DVIR---LIKQILEGVYYLHQN 150
Query: 237 GLVYRDCKPENILLDD---YGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKY 293
+V+ D KP+NILL G ++I D G++ +I +R +GT Y+APE+++ +
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPI 210
Query: 294 TYSPDWFSFGCLIFEMIEGQAPF 316
T + D ++ G + + ++ +PF
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 61
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N+L
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVL 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 68
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 184
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 62
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 64
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 63
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ KF + G + + Y ++L GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF--MDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 179
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 110 PITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ 169
P + + F+ +G+G +G V + + TG++ A S + E +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLK 60
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++N +V L T++ L LV ++ KF + G + + Y ++L G
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKF--MDASALTGIPLPLIKSYLFQLLQG 118
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPE 286
L H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 287 VIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
++ K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 64
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA G A + E +L+ +N
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR-AYRELVLLKCVNH 80
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + +M D R + ++L
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIHME----LDHERMSYLLYQML 134
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
I Y + D +S GC++ E+++G F+
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKGSVIFQ 224
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F + ++G G +G+V + TG++ A E + E +L+K +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHR 81
Query: 176 VVSLAYAYETK-------DALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLC 228
++ Y K D L LV+ G + I N G + A + E+L
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA-YICREILR 140
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEV 287
GL HLH +++RD K +N+LL + V++ D G++ ++ R +GT +MAPEV
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
Query: 288 I-----DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
I + Y + D +S G EM EG P
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 64
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 64
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 64
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 64
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
VLG+G FG+V + + YA S +L E +L +N ++VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL----STILSEVMLLASLNHQYVVRYY 68
Query: 181 YAYETKDALCLVLTIMNGGDLKF---------HIYNMGGEPGFDIARARFYAA--EVLCG 229
A+ + +T + F +Y++ + R ++ ++L
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP---------------EGESVR 274
L ++H G+++RD KP NI +D+ +V+I D GLA + +++
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 275 GRVGTVGYMAPEVIDNE-KYTYSPDWFSFGCLIFEMI 310
+GT Y+A EV+D Y D +S G + FEMI
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 109 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 162
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 223 SMIFRKEPF 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 61
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ DLK + G + + Y ++L GL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLK-DFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 177
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+GKG FGEV T ++ A + E +L + +S ++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPYITRYFG 84
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+Y L +++ + GG + G IA E+L GL++LH ++R
Sbjct: 85 SYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEETYIATI---LREILKGLDYLHSERKIHR 140
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVIDNEKYTYSPDWF 300
D K N+LL + G V+++D G+A ++ + + R VGT +MAPEVI Y + D +
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
Query: 301 SFGCLIFEMIEGQAP 315
S G E+ +G+ P
Sbjct: 201 SLGITAIELAKGEPP 215
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 109 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 162
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 223 SMIFRKEPF 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
+ + F+ +G+G +G V + + TG++ A S + E +L+++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKEL 62
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
N +V L T++ L LV ++ DLK + G + + Y ++L GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLK-DFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEIL 178
Query: 289 DNEK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 110 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 164 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 224 SMIFRKEPF 232
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A G++ E QI++K++ +V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------GKAFKNRELQIMRKLDHCNIVRL 78
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A G++ E QI++K++ +V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------GKAFKNRELQIMRKLDHCNIVRL 78
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 108 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 161
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 162 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 221
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 222 SMIFRKEPF 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F VLG+G FG+V + + YA S +L E +L +N ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL----STILSEVMLLASLNHQY 63
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKF---------HIYNMGGEPGFDIARARFYAA-- 224
VV A+ + +T + F +Y++ + R ++
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP---------------E 269
++L L ++H G+++RD KP NI +D+ +V+I D GLA +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 270 GESVRGRVGTVGYMAPEVIDNE-KYTYSPDWFSFGCLIFEMI 310
+++ +GT Y+A EV+D Y D +S G + FEMI
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 105 YNEIQPITY--KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVL 162
Y+ +P ++ ++F+ LG G +GEV + + G++YA + L
Sbjct: 46 YDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKL 104
Query: 163 IEKQILQKINSRFV-VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
E +K+ V L A+E L L T + G L+ H G A+
Sbjct: 105 AEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ-TELCGPSLQQHCEAWGAS--LPEAQVWG 161
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG 281
Y + L L HLH GLV+ D KP NI L G ++ D GL VE+ + + G
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 282 YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
YMAPE++ Y + D FS G I E+
Sbjct: 222 YMAPELLQG-SYGTAADVFSLGLTILEV 248
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G +GEV R T + A I+K+I +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINAMLNH 64
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
RFY E+L L++ H +G+++RD KP N+++D ++ +R+ D GLA G+ RV
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA 193
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC++ MI + PF
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 15 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L M F G ++AR+ F+ +VL + H H
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 131
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 185
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDY-GHVRISDLG----LAVEIPEGESVRG 275
FY ++L GL++LH +V+RD K +N+L++ Y G ++ISD G LA P E+
Sbjct: 126 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-- 183
Query: 276 RVGTVGYMAPEVIDN--EKYTYSPDWFSFGCLIFEMIEGQAPF 316
GT+ YMAPE+ID Y + D +S GC I EM G+ PF
Sbjct: 184 -TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + +DI RFY E+L L++ H +G+++RD KP N++
Sbjct: 115 ALVFEHVNNTDFK-QLYQTLTD--YDI---RFYMYEILKALDYCHSMGIMHRDVKPHNVM 168
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D ++ +R+ D GLA G+ RV + + PE ++D + Y YS D +S GC++
Sbjct: 169 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 228
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 229 SMIFRKEPF 237
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 20/225 (8%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
L T+++Y + + + + ++G+G +G V C+ + TG++ A +
Sbjct: 14 LGTENLYFQ----SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV-K 68
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVL-----TIMNGGDLKFHIYNMGGEPG 213
+ + E ++L+++ +V+L + K LV TI++ DL+ G
Sbjct: 69 KIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD--DLELF------PNG 120
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GES 272
D + Y +++ G+ H +++RD KPENIL+ G V++ D G A + GE
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180
Query: 273 VRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE ++ + KY + D ++ GCL+ EM G+ F
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
+ L Y T L +V G L H++ + E F++ + A + G+++LH
Sbjct: 66 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAV---EIPEGESVRGRVGTVGYMAPEVI---DN 290
+++RD K NI L + V+I D GLA G++ +MAPEVI D
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
Y++ D ++FG +++E++ GQ P+ + RD++
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQI 218
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL--QKINS 173
+ + + LG+G GEV R T + A I+K+I + +N
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
VV + L L +GG+L I G P D R + +++ G+ +L
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYL 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDN 290
H IG+ +RD KPEN+LLD+ +++ISD GLA R GT+ Y+APE++
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 291 EKYTYSP-DWFSFGCLIFEMIEGQAPF 316
++ P D +S G ++ M+ G+ P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 183 TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FG+ + G+ Y E E +L + +V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR-EVAVLANMKHPNIVQYRE 90
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
++E +L +V+ GGDL F N F + + ++ L+H+H +++R
Sbjct: 91 SFEENGSLYIVMDYCEGGDL-FKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR 149
Query: 242 DCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWF 300
D K +NI L G V++ D G+A V E R +GT Y++PE+ +N+ Y D +
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIW 209
Query: 301 SFGCLIFEM 309
+ GC+++E+
Sbjct: 210 ALGCVLYEL 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA G A + E +L+ +N
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR-AYRELVLLKCVNH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + +M D R + ++L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIHME----LDHERMSYLLYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
I Y + D +S GC++ E+++G F+
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKGCVIFQ 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 9/213 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+ F+ +G+G +G V + + TG++ A S + E +L+++N
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV-PSTAIREISLLKELNH 60
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+V L T++ L LV ++ DLK + + G + + Y ++L GL
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVIDN 290
H +++RD KP+N+L++ G ++++D GLA G VR V T+ Y APE++
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 291 EK-YTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
K Y+ + D +S GC+ EM+ +A F E+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
+ ++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 111
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG 278
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + E VG
Sbjct: 112 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLID-EMANEFVG 168
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEK 338
T YM+PE + Y+ D +S G + EM G+ P R M + +D V E K
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPPPK 225
Query: 339 -----YSCRFSD 345
+S F D
Sbjct: 226 LPSAVFSLEFQD 237
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDY-GHVRISDLG----LAVEIPEGESVRG 275
FY ++L GL++LH +V+RD K +N+L++ Y G ++ISD G LA P E+
Sbjct: 112 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-- 169
Query: 276 RVGTVGYMAPEVIDN--EKYTYSPDWFSFGCLIFEMIEGQAPF 316
GT+ YMAPE+ID Y + D +S GC I EM G+ PF
Sbjct: 170 -TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKXVNH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + M D R + ++L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQME----LDHERMSYLLYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 5/201 (2%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F LG G G V Q R +G + A + ++ E Q+L + NS +
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ--IIRELQVLHECNSPY 75
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+V A+ + + + + M+GG L + P + + L L H
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTY 295
I ++RD KP NIL++ G +++ D G++ ++ + + VGT YMAPE + Y+
Sbjct: 136 I--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMAPERLQGTHYSV 192
Query: 296 SPDWFSFGCLIFEMIEGQAPF 316
D +S G + E+ G+ P
Sbjct: 193 QSDIWSMGLSLVELAVGRYPI 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 78
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKXVNH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 78
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 86
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 206
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 207 DYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 79
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 199
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 200 DYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 78
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 97
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 217
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 218 DYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 16/250 (6%)
Query: 73 KPQYHKYNVFLDSIENYELEMDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCA 132
KPQ H ++V + E+ E+ + + +R S +++ + F +LG+GGFG+V
Sbjct: 4 KPQDHFFDV--PAEEDPEVHLGQLKRFSLRELQ-----VASDNFSNKNILGRGGFGKVYK 56
Query: 133 CQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLV 192
++ A G + A GE E +++ R ++ L T LV
Sbjct: 57 GRL-ADGTLVAVKRLKEERXQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 113
Query: 193 LTIMNGGDLKFHIYNM-GGEPGFDIARARFYAAEVLCGLEHLHY---IGLVYRDCKPENI 248
M G + + +P D + + A GL +LH +++RD K NI
Sbjct: 114 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 173
Query: 249 LLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLI 306
LLD+ + D GLA ++ + GT+G++APE + K + D F +G ++
Sbjct: 174 LLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML 233
Query: 307 FEMIEGQAPF 316
E+I GQ F
Sbjct: 234 LELITGQRAF 243
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
+ ++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 170
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG 278
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + + VG
Sbjct: 171 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVG 227
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
T YM+PE + Y+ D +S G + EM G+ P
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
+ ++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 127
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG 278
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + + VG
Sbjct: 128 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVG 184
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
T YM+PE + Y+ D +S G + EM G+ P
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 90
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 90
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 82
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 202
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 203 DYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 78
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
+ ++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG 278
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + + VG
Sbjct: 109 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVG 165
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
T YM+PE + Y+ D +S G + EM G+ P
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 102/249 (40%), Gaps = 24/249 (9%)
Query: 87 ENYELEMDENRRLS-----TKDIYNEI--QPITYKTFRMYRVLGKGGFGEVCACQVR--- 136
EN LE+ + R S K++ N +PI+ +M G+GGFG V V
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKM----GEGGFGVVYKGYVNNTT 56
Query: 137 -ATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTI 195
A K+ A + E +++ K +V L D LCLV
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQ-----EIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111
Query: 196 MNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGH 255
M G L + + G P A G+ LH ++RD K NILLD+
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT 171
Query: 256 VRISDLGLAVEIPE-GESVRGR--VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEG 312
+ISD GLA + ++V VGT YMAPE + E T D +SFG ++ E+I G
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG 230
Query: 313 QAPFRRRKE 321
+E
Sbjct: 231 LPAVDEHRE 239
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTV 280
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + + VGT
Sbjct: 111 IAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTR 167
Query: 281 GYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
YM+PE + Y+ D +S G + EM G+ P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTV 280
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + + VGT
Sbjct: 111 IAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTR 167
Query: 281 GYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
YM+PE + Y+ D +S G + EM G+ P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTV 280
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + + VGT
Sbjct: 111 IAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTR 167
Query: 281 GYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
YM+PE + Y+ D +S G + EM G+ P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
++ E Q+L + NS ++V A+ + + + + M+GG L + G P + +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTV 280
+ L L H I ++RD KP NIL++ G +++ D G++ ++ + + VGT
Sbjct: 111 IAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTR 167
Query: 281 GYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
YM+PE + Y+ D +S G + EM G+ P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 91
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 211
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 212 DYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 125 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 184
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 102/249 (40%), Gaps = 24/249 (9%)
Query: 87 ENYELEMDENRRLS-----TKDIYNEI--QPITYKTFRMYRVLGKGGFGEVCACQVR--- 136
EN LE+ + R S K++ N +PI+ +M G+GGFG V V
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKM----GEGGFGVVYKGYVNNTT 56
Query: 137 -ATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTI 195
A K+ A + E +++ K +V L D LCLV
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQ-----EIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111
Query: 196 MNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGH 255
M G L + + G P A G+ LH ++RD K NILLD+
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT 171
Query: 256 VRISDLGLAVEIPE-GESVRGR--VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEG 312
+ISD GLA + ++V VGT YMAPE + E T D +SFG ++ E+I G
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG 230
Query: 313 QAPFRRRKE 321
+E
Sbjct: 231 LPAVDEHRE 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 112
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 232
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 106
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 226
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 127
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 181
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + + FDI RFY E+L L++ H G+++RD KP N++
Sbjct: 111 ALVFEYINNTDFK-QLYQILTD--FDI---RFYMYELLKALDYCHSKGIMHRDVKPHNVM 164
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D +R+ D GLA + RV + + PE ++D + Y YS D +S GC++
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 225 SMIFRREPF 233
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 154
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 153
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI--PEGESVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ E SV + G V +MA E + +K+
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 83
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 203
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 15 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 131
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 185
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 120
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 174
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 120
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 174
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 132
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 186
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 132
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 186
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 132
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 186
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 149
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAP 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 81
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 135
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 114
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 234
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 235 DYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 83
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 137
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 153
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 16 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 134 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 185
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 112
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 232
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 127
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 181
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 76
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 130
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 16 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 134 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 185
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 83
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 137
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 147 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 198
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 250
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 14 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 72
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 73 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 130
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 184
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 221
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 154
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 44 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 161
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 162 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 213
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 152
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 146
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAP 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 76
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 130
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 17 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 135 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 186
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 173
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 234 TTKSDVWSFGVLLWELMTRGAP 255
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 75
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + + M D R + ++L
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQME----LDHERMSYLLYQML 129
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
CG++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 107 EIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVL 162
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 45 EKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 163 IEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 163 FW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYT 214
Query: 278 ---GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++L G++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S GC++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 151
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAP 233
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 17 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 135 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 186
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENIL 249
LV +N D K +Y + + FDI RFY E+L L++ H G+++RD KP N++
Sbjct: 116 ALVFEYINNTDFK-QLYQILTD--FDI---RFYMYELLKALDYCHSKGIMHRDVKPHNVM 169
Query: 250 LD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE-VIDNEKYTYSPDWFSFGCLIF 307
+D +R+ D GLA + RV + + PE ++D + Y YS D +S GC++
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 308 EMIEGQAPF 316
MI + PF
Sbjct: 230 SMIFRREPF 238
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G+++L
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKF 172
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAP 254
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 17 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 135 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 186
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 116
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 236
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 237 DYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
V T Y APEVI Y + D +S GC++ EM+
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++G GGFG+V + R GK Y E + L K++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER-------EVKALAKLDHVN 65
Query: 176 VV-------SLAYAYETKD-------ALCLVLTIM--NGGDLKFHIYNMGGEPGFDIARA 219
+V Y ET CL + + + G L+ I GE D A
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLA 124
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP-EGESVRGRVG 278
++ G++++H L+ RD KP NI L D V+I D GL + +G+ R + G
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-G 183
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
T+ YM+PE I ++ Y D ++ G ++ E++
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 9/162 (5%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
S + E IL+++ +V L TK L LV ++ DLK + G G +
Sbjct: 45 STTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG--GLESVT 101
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG--- 275
A+ + ++L G+ + H +++RD KP+N+L++ G ++I+D GLA G VR
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTH 159
Query: 276 RVGTVGYMAPEVI-DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T+ Y AP+V+ ++KY+ + D +S GC+ EM+ G F
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+V+G G FG V ++ +G++ A E QI++K++ +V L
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRL 157
Query: 180 AYAY----ETKDA--LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
Y + E KD L LVL + + + + + + Y ++ L ++
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 234 HYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI-DNE 291
H G+ +RD KP+N+LLD D +++ D G A ++ GE + + Y APE+I
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 277
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
YT S D +S GC++ E++ GQ F
Sbjct: 278 DYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 49 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 166
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 167 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 218
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 219 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 270
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%)
Query: 211 EPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
EPG + ++L GL+ LH +V+RD KP+NIL+ G ++++D GLA
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ 173
Query: 271 ESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
++ V T+ Y APEV+ Y D +S GC+ EM + FR
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 9/162 (5%)
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
S + E IL+++ +V L TK L LV ++ DLK + G G +
Sbjct: 45 STTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG--GLESVT 101
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG--- 275
A+ + ++L G+ + H +++RD KP+N+L++ G ++I+D GLA G VR
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTH 159
Query: 276 RVGTVGYMAPEVI-DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T+ Y AP+V+ ++KY+ + D +S GC+ EM+ G F
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G++ L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKF 152
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI--PEGESVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ E +SV + G V +MA E + +K+
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 39/225 (17%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F+ ++G GGFG+V + R GK Y E + L K++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER-------EVKALAKLDHVN 66
Query: 176 VV-------SLAYAYETKD--------------------ALCLVLTIM--NGGDLKFHIY 206
+V Y ET D CL + + + G L+ I
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 207 NMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVE 266
GE D A ++ G++++H L++RD KP NI L D V+I D GL
Sbjct: 127 KRRGEK-LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 267 IP-EGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
+ +G+ R + GT+ YM+PE I ++ Y D ++ G ++ E++
Sbjct: 186 LKNDGKRTRSK-GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%)
Query: 211 EPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
EPG + ++L GL+ LH +V+RD KP+NIL+ G ++++D GLA
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ 173
Query: 271 ESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
++ V T+ Y APEV+ Y D +S GC+ EM + FR
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%)
Query: 211 EPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
EPG + ++L GL+ LH +V+RD KP+NIL+ G ++++D GLA
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ 173
Query: 271 ESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
++ V T+ Y APEV+ Y D +S GC+ EM + FR
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F R LG G FG+V + R++G + + E ++L+ ++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ--IEAEIEVLKSLDHPN 81
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL----CGLE 231
++ + +E + +V+ GG+L I + A + Y AE++ L
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK---ALSEGYVAELMKQMMNALA 138
Query: 232 HLHYIGLVYRDCKPENILLDD---YGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI 288
+ H +V++D KPENIL D + ++I D GLA E GT YMAPEV
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 289 DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ T+ D +S G +++ ++ G PF
Sbjct: 199 KRD-VTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 38 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 96
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 97 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 154
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 208
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
+Y S +S G L+++M+ G PF +E+++
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 245
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 36 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 153
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 154 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 205
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 257
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
V T Y APEVI Y + D +S GC++ EM+
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 31/222 (13%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F VLG+G FG+V + + YA S +L E +L +N ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL----STILSEVXLLASLNHQY 63
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKF---------HIYNMGGEPGFDIARARFYAA-- 224
VV A+ + T + F +Y++ + R ++
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIP---------------E 269
++L L ++H G+++R+ KP NI +D+ +V+I D GLA +
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 270 GESVRGRVGTVGYMAPEVIDNE-KYTYSPDWFSFGCLIFEMI 310
+++ +GT Y+A EV+D Y D +S G + FE I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 8/207 (3%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKM-YACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
++ RV+G G FGEVC+ +++ GK A L E I+ + +
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
VV L + +V+ M G L + G+ F + + + G+ +L
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ--FTVIQLVGMLRGIAAGMRYLA 162
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG-ESVRGRVG---TVGYMAPEVIDN 290
+G V+RD NIL++ ++SD GL+ I + E+V G V + APE I
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 291 EKYTYSPDWFSFGCLIFEMIE-GQAPF 316
K+T + D +S+G +++E++ G+ P+
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERPY 249
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGK 678
F + + ++ RV+G G FGEVC+ +++ GK
Sbjct: 36 FAKELDASCIKIERVIGAGEFGEVCSGRLKLPGK 69
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 148 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 199
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
GT Y PE I +Y S +S G L+++M+ G PF +E++
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G++ L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKF 154
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI--PEGESVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ E +SV + G V +MA E + +K+
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G++ L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKF 155
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ + E SV + G V +MA E + +K+
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G++ L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKF 155
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI--PEGESVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ E +SV + G V +MA E + +K+
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G +G V Q G+ +A S + E IL+++ +V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGI-PSTTIREISILKELKHSNIVKLYD 67
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
TK L LV ++ DLK + G G + A+ + ++L G+ + H +++R
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI-DNEKYTYSP 297
D KP+N+L++ G ++I+D GLA G VR + T+ Y AP+V+ ++KY+ +
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 298 DWFSFGCLIFEMIEGQAPF 316
D +S GC+ EM+ G F
Sbjct: 183 DIWSVGCIFAEMVNGTPLF 201
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 113 YKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI--LQK 170
Y+ + + LG+G FG V C ++ K Y G VL++K+I L
Sbjct: 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK------GTDQVLVKKEISILNI 57
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF--YAAEVLC 228
R ++ L ++E+ + L ++ ++G D I+ F++ Y +V
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLD----IFERINTSAFELNEREIVSYVHQVCE 113
Query: 229 GLEHLHYIGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPE 286
L+ LH + + D +PENI+ ++I + G A ++ G++ R Y APE
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V ++ + + D +S G L++ ++ G PF
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPF 203
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 148 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 199
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
GT Y PE I +Y S +S G L+++M+ G PF +E++
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 147 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 198
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
GT Y PE I +Y S +S G L+++M+ G PF +E++
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G++ L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKF 159
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI--PEGESVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ E +SV + G V +MA E + +K+
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G++ L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKF 154
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI--PEGESVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ E +SV + G V +MA E + +K+
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 148 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 199
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
GT Y PE I +Y S +S G L+++M+ G PF +E++
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 147 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 198
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
GT Y PE I +Y S +S G L+++M+ G PF +E++
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 14/233 (6%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG+V + + TG + A ++E +IL + ++V L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 75
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
AY L +++ GG + + + + G + + ++L L LH +++R
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVI-----DNEKYTY 295
D K N+L+ G +R++D G++ + + R +GT +MAPEV+ + Y Y
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 296 SPDWFSFGCLIFEMIEGQAPFRRRKEM---VKRDEVDRRVKEDAEKYSCRFSD 345
D +S G + EM + + P M +K + D K+S F D
Sbjct: 194 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 246
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 30 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 148 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 199
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
GT Y PE I +Y S +S G L+++M+ G PF +E++
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMV 161
E +P+ + +++ +LG GGFG V + +R + + GE + V
Sbjct: 29 KEKEPLESQ-YQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 162 LIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
+E +L+K++S F V+ L +E D+ L+L F G ++AR+
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV- 277
F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++ V
Sbjct: 147 FFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVY 198
Query: 278 ----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
GT Y PE I +Y S +S G L+++M+ G PF +E++
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 88 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 146
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 206
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 207 WSLGVIMYILLCGYPPF 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 14/233 (6%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG+V + + TG + A ++E +IL + ++V L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 83
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
AY L +++ GG + + + + G + + ++L L LH +++R
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 141
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVI-----DNEKYTY 295
D K N+L+ G +R++D G++ + + R +GT +MAPEV+ + Y Y
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 296 SPDWFSFGCLIFEMIEGQAPFRRRKEM---VKRDEVDRRVKEDAEKYSCRFSD 345
D +S G + EM + + P M +K + D K+S F D
Sbjct: 202 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 254
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 90 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 148
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 208
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 209 WSLGVIMYILLCGYPPF 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 89 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 147
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 207
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 208 WSLGVIMYILLCGYPPF 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKXVNH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + M D R + ++L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQME----LDHERMSYLLYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
G++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE----SMVLIEKQILQKINSRF- 175
+LG GGFG V + +R + + GE + V +E +L+K++S F
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 176 -VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
V+ L +E D+ L+L F G ++AR+ F+ +VL + H H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--QVLEAVRHCH 127
Query: 235 YIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRV-----GTVGYMAPEVI 288
G+++RD K ENIL+D + G +++ D G G ++ V GT Y PE I
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWI 181
Query: 289 DNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMV 323
+Y S +S G L+++M+ G PF +E++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 203 WSLGVIMYILLCGYPPF 219
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 17/236 (7%)
Query: 100 STKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES 159
T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPE 55
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIA 217
L E Q+++K+ +V L YA +++ + +V MN G L + + GE G +
Sbjct: 56 AFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSL---LDFLKGETGKYLRLP 111
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRG 275
+ +A++ G+ ++ + V+RD + NIL+ + +++D GLA +E E + +G
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG 171
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
+ + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 172 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 83 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 141
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 201
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 202 WSLGVIMYILLCGYPPF 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 201 WSLGVIMYILLCGYPPF 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 187
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
V T Y APEVI Y + D +S GC++ EM+
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 128 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 246
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 247 WSLGVIMYILLCGYPPF 263
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR-FVVSL 179
+G G + E C +AT YA E +IL + +++L
Sbjct: 34 TIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE-------EIEILLRYGQHPNIITL 86
Query: 180 AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
Y+ + LV +M GG+L I + F A F + +E+LH G+V
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILR---QKFFSEREASFVLHTIGKTVEYLHSQGVV 143
Query: 240 YRDCKPENIL-LDDYGH---VRISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDNEKYT 294
+RD KP NIL +D+ G+ +RI D G A ++ E + T ++APEV+ + Y
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L++ M+ G PF
Sbjct: 204 EGCDIWSLGILLYTMLAGYTPF 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++LCG++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
V T Y APEVI Y + D +S GC++ EM+
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 203 WSLGVIMYILLCGYPPF 219
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++K+ +V L YA +++ + +V+ M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVR 274
+ AA++ G+ ++ + V+RD + NIL+ + +++D GLA +E E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR-FVVSL 179
+G G + E C +AT YA E +IL + +++L
Sbjct: 34 TIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE-------EIEILLRYGQHPNIITL 86
Query: 180 AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
Y+ + LV +M GG+L I + F A F + +E+LH G+V
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILR---QKFFSEREASFVLHTIGKTVEYLHSQGVV 143
Query: 240 YRDCKPENIL-LDDYGH---VRISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDNEKYT 294
+RD KP NIL +D+ G+ +RI D G A ++ E + T ++APEV+ + Y
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S G L++ M+ G PF
Sbjct: 204 EGCDIWSLGILLYTMLAGYTPF 225
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 134 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 252
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 253 WSLGVIMYILLCGYPPF 269
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 121 VLGKGGFGEV-CACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
V+G+G FG V + GK C S L E I++ + V+SL
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 180 -AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
++ + +VL M GDL+ I N P + + +V G++ L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKF 213
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI--PEGESVRGRVGT---VGYMAPEVIDNEKY 293
V+RD N +LD+ V+++D GLA ++ E +SV + G V +MA E + +K+
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 294 TYSPDWFSFGCLIFEMIEGQAP 315
T D +SFG L++E++ AP
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAP 295
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 201 WSLGVIMYILLCGYPPF 217
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 102 KDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMV 161
KD++ I ++ ++ + LG G FGEV K+
Sbjct: 1 KDVWE----IPRESLQLIKRLGNGQFGEVWMGTWNGNTKV-----AIKTLKPGTMSPESF 51
Query: 162 LIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
L E QI++K+ +V L YA +++ + +V MN G L + + G +
Sbjct: 52 LEEAQIMKKLKHDKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVD 109
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGT 279
AA+V G+ ++ + ++RD + NIL+ + +I+D GLA +E E + +G
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP 169
Query: 280 VGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
+ + APE ++T D +SFG L+ E++ +G+ P+
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V+ ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 98 YAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRD 156
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 216
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G +++ ++ G PF
Sbjct: 217 WSLGVIMYILLCGYPPF 233
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 83/207 (40%), Gaps = 13/207 (6%)
Query: 122 LGKGGFGEVCACQVR----ATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVV 177
+G+GGFG V V A K+ A + E +++ K +V
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ-----EIKVMAKCQHENLV 87
Query: 178 SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
L D LCLV M G L + + G P A G+ LH
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 147
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLA---VEIPEGESVRGRVGTVGYMAPEVIDNEKYT 294
++RD K NILLD+ +ISD GLA + + VGT YMAPE + E T
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE-IT 206
Query: 295 YSPDWFSFGCLIFEMIEGQAPFRRRKE 321
D +SFG ++ E+I G +E
Sbjct: 207 PKSDIYSFGVVLLEIITGLPAVDEHRE 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLF 228
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 17/236 (7%)
Query: 100 STKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES 159
T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPE 55
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIA 217
L E Q+++K+ +V L YA +++ + +V MN G L + + GE G +
Sbjct: 56 AFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSL---LDFLKGETGKYLRLP 111
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRG 275
+ +A++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 171
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
+ + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 172 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLF 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLF 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLF 229
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++K+ +V L YA +++ + +V+ M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVR 274
+ AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++KI +V L YA +++ + +V M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVR 274
+ AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLF 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM 160
T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 171 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEA 225
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIAR 218
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G + +
Sbjct: 226 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQ 281
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGR 276
AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
+ + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 393
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 99 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 211
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 212 QTVDIWSVGCIMAELLTGRTLF 233
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM 160
T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 171 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEA 225
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIAR 218
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G + +
Sbjct: 226 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQ 281
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGR 276
AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
+ + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 393
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKSQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GL + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ--KINS 173
+ + +V+GKG FG+V + A + I + + + K N+
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGE---PGFDIARARFYAAEVLCGL 230
V+ + + ++ +C+ + L ++Y + + GF + R +A +L L
Sbjct: 159 MNVIHMLENFTFRNHICMTFEL-----LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN 290
+ LH +++ D KPENILL G I + E + V + + Y APEVI
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG 273
Query: 291 EKYTYSPDWFSFGCLIFEMIEG 312
+Y D +S GC++ E++ G
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ--KINS 173
+ + +V+GKG FG+V + A + I + + + K N+
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGE---PGFDIARARFYAAEVLCGL 230
V+ + + ++ +C+ + L ++Y + + GF + R +A +L L
Sbjct: 159 MNVIHMLENFTFRNHICMTFEL-----LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN 290
+ LH +++ D KPENILL G I + E + V + + Y APEVI
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG 273
Query: 291 EKYTYSPDWFSFGCLIFEMIEG 312
+Y D +S GC++ E++ G
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGXVATRWYRAPEIMLNWMHYN 221
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLF 243
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLF 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLF 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGXVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + M D R + ++L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQME----LDHERMSYLLYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
G++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 120 RVLGKGGFGEVCACQVRATGKM-YACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVS 178
RV+G G FGEVC+ +++ GK L E I+ + + ++
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 179 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGL 238
L + +V M G L + G+ F + + + G+++L +G
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ--FTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 239 VYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRGRVGTVGYMAPEVIDNEKYT 294
V+RD NIL++ ++SD GL+ + PE + RG + + APE I K+T
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFT 205
Query: 295 YSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ D +S+G +++E++ G+ P+ EM +D +
Sbjct: 206 SASDVWSYGIVMWEVVSYGERPYW---EMTNQDVI 237
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGK 678
F + I + RV+G G FGEVC+ +++ GK
Sbjct: 15 FAKEIEASCITIERVIGAGEFGEVCSGRLKLPGK 48
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLF 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLF 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ R+ LG+G FGEV T ++ L E Q+++K
Sbjct: 5 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEAFLQEAQVMKK 59
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIARARFYAAEVLC 228
+ +V L YA +++ + +V M+ G L + + GE G + + AA++
Sbjct: 60 LRHEKLVQL-YAVVSEEPIXIVTEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPE 286
G+ ++ + V+RD + NIL+ + +++D GLA +E E + +G + + APE
Sbjct: 116 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 287 VIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNE-KYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNAMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K ++ + +G G G VCA + A + E +++ +N
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 75
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++SL + + L LV+ +M+ + M D R + ++L
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQME----LDHERMSYLLYQML 129
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
G++HLH G+++RD KP NI++ ++I D GLA + V T Y APEV
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
I Y + D +S GC++ EM+ + F R
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLF 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG V R K ++ E QI+ ++++ ++V L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ +AL LV+ + GG L H + +G ++ +V G+++L V+R
Sbjct: 78 VCQA-EALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESV----RGRVGTVGYMAPEVIDNEKYTYSP 297
D N+LL + + +ISD GL+ + +S + + APE I+ K++
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 194
Query: 298 DWFSFGCLIFEMIE-GQAPFRRRK 320
D +S+G ++E + GQ P+++ K
Sbjct: 195 DVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLF 243
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQ--KINS 173
+ + +V+GKG FG+V + A + I + + + K N+
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGE---PGFDIARARFYAAEVLCGL 230
V+ + + ++ +C+ + L ++Y + + GF + R +A +L L
Sbjct: 159 MNVIHMLENFTFRNHICMTFEL-----LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN 290
+ LH +++ D KPENILL G I + E + V + + Y APEVI
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILG 273
Query: 291 EKYTYSPDWFSFGCLIFEMIEG 312
+Y D +S GC++ E++ G
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM 160
T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 254 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEA 308
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIAR 218
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G + +
Sbjct: 309 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQ 364
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGR 276
AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G
Sbjct: 365 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
+ + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 476
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
KT+ +G G +G VC+ + +G+ A + E +L+ +
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKR-AYRELLLLKHMQH 100
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
V+ L + +L LV+ M K MG E F + ++ ++L
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI----MGME--FSEEKIQYLVYQML 154
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
GL+++H G+V+RD KP N+ +++ ++I D GLA + G V T Y APEV
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEV 212
Query: 288 IDN-EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDD 346
I + Y + D +S GC++ EM+ G+ F+ + + + ++ + ++ + +D
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 272
Query: 347 XXXXXXXXXXXSPR 360
+PR
Sbjct: 273 AAKSYIQSLPQTPR 286
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLF 242
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVR 274
+ AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 8/201 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G G G+V + R TG + A ++ ++ +L+ + ++V
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-VVLKSHDCPYIVQCFG 91
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ T + + + +M K G P + + + L L+ H G+++R
Sbjct: 92 TFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHR 149
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVID-----NEKYTYS 296
D KP NILLD+ G +++ D G++ + + ++ G YMAPE ID Y
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIR 209
Query: 297 PDWFSFGCLIFEMIEGQAPFR 317
D +S G + E+ GQ P++
Sbjct: 210 ADVWSLGISLVELATGQFPYK 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 200
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 201 QTVDIWSVGCIMAELLTGRTLF 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLNWMHYN 197
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLF 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLF 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLF 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLF 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLF 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLF 220
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVCEYMSKGSL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVR 274
+ AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLF 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLF 246
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM 160
T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 171 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEA 225
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIAR 218
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G + +
Sbjct: 226 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVGEYMSKGSL---LDFLKGETGKYLRLPQ 281
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGR 276
AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
+ + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 393
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++K+ +V L YA +++ + +V+ M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVMEYMSKGCL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVR 274
+ AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++L G++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S G ++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILL---DDYGHVR--ISDLGLAVEIPEGESV----RG 275
+ GL HLH + +V+RD KP NIL+ + +G ++ ISD GL ++ G G
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 276 RVGTVGYMAPEVID---NEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
GT G++APE++ E TY+ D FS GC+ + +I EG PF
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 12/223 (5%)
Query: 112 TYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI 171
T F + R LGKG FG V + + + + A E + E +I +
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL 80
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
+ ++ L + + + L+L G+L + FD R E+ L
Sbjct: 81 HHPNILRLYNYFYDRRRIYLILEYAPRGEL---YKELQKSCTFDEQRTATIMEELADALM 137
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRV--GTVGYMAPEVID 289
+ H +++RD KPEN+LL G ++I+D G +V P S+R + GT+ Y+ PE+I+
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMCGTLDYLPPEMIE 194
Query: 290 NEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRV 332
+ D + G L +E++ G PF E +E RR+
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPF----ESASHNETYRRI 233
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLF 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLF 225
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 129 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLF 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D R + ++L G++HLH G+++RD KP NI++ ++I D GLA +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APEVI Y + D +S G ++ EMI+G F
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 130 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 189
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 190 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 183 YETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRD 242
Y + L +V ++GG+L I + G + F A + +++LH I + +RD
Sbjct: 128 YAGRKCLLIVXECLDGGELFSRIQDRGDQ-AFTEREASEIXKSIGEAIQYLHSINIAHRD 186
Query: 243 CKPENILLDDY---GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDW 299
KPEN+L ++++D G A E S+ T Y+APEV+ EKY S D
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDX 246
Query: 300 FSFGCLIFEMIEGQAPF 316
+S G + + ++ G PF
Sbjct: 247 WSLGVIXYILLCGYPPF 263
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLF 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLF 229
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 129 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLF 235
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 200 QTVDIWSVGCIMAELLTGRTLF 221
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLI-EKQILQKINSRFVV--- 177
LGKG FG V C+ G + E QIL+ ++S F+V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 178 SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
++Y + +L LV+ + G L+ + D +R Y++++ G+E+L
Sbjct: 78 GVSYG-PGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSRR 134
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES---VR-GRVGTVGYMAPEVIDNEKY 293
V+RD NIL++ HV+I+D GLA +P + VR + + APE + + +
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 294 TYSPDWFSFGCLIFEM 309
+ D +SFG +++E+
Sbjct: 195 SRQSDVWSFGVVLYEL 210
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXG--ESMVLIEKQILQKI 171
K + LG+G F V + + T ++ A L E ++LQ++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
+ ++ L A+ K + LV M DL+ I + + + Y L GLE
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLE 126
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG---RVGTVGYMAPEVI 288
+LH +++RD KP N+LLD+ G ++++D GLA G R +V T Y APE++
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELL 184
Query: 289 DNEK-YTYSPDWFSFGCLIFEMI 310
+ Y D ++ GC++ E++
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXX---XXXGESMVL-IEKQILQKI 171
+R+ +LGKGGFG V A R T ++ +S+ +E +L K+
Sbjct: 33 YRLGPLLGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 172 NS----RFVVSLAYAYETKDALCLVLT-IMNGGDLKFHIYNMG--GEPGFDIARARFYAA 224
+ V+ L +ET++ LVL + DL +I G GE +R +
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE-----GPSRCFFG 146
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVGTVGYM 283
+V+ ++H H G+V+RD K ENIL+D G ++ D G + E GT Y
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDFDGTRVYS 205
Query: 284 APEVIDNEKYTYSP-DWFSFGCLIFEMIEGQAPFRRRKEMVK 324
PE I +Y P +S G L+++M+ G PF R +E+++
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE 247
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 200 DLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRIS 259
DL+ ++ + PG + + L GL+ LH +V+RD KPENIL+ G V+++
Sbjct: 104 DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLA 162
Query: 260 DLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRR 319
D GLA ++ V T+ Y APEV+ Y D +S GC+ EM FRR+
Sbjct: 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM------FRRK 216
Query: 320 KEMVKRDEVDR 330
E D+
Sbjct: 217 PLFCGNSEADQ 227
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLF 234
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLF 242
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ R+ LG+G FGEV T ++ L E Q+++K
Sbjct: 8 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEAFLQEAQVMKK 62
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIARARFYAAEVLC 228
+ +V L YA +++ + +V M+ G L + + GE G + + AA++
Sbjct: 63 LRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPE 286
G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G + + APE
Sbjct: 119 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 287 VIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLF 243
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 224
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLF 246
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FGEV + ++RA + A ++ L E +IL++ + +V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
K + +V+ ++ GGD + G + + G+E+L ++R
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG-----TVGYMAPEVIDNEKYTYS 296
D N L+ + ++ISD G++ E E + V G V + APE ++ +Y+
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSRE--EADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 297 PDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEVDR 330
D +SFG L++E G +P+ R+ V++
Sbjct: 296 SDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK 330
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FGEV + ++RA + A ++ L E +IL++ + +V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
K + +V+ ++ GGD + G + + G+E+L ++R
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEG---ESVRGRVGTVGYMAPEVIDNEKYTYSPD 298
D N L+ + ++ISD G++ E +G S R V + APE ++ +Y+ D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 299 WFSFGCLIFEMIE-GQAPFRRRKEMVKRDEVDR 330
+SFG L++E G +P+ R+ V++
Sbjct: 298 VWSFGILLWETFSLGASPYPNLSNQQTREFVEK 330
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
R+Y E+L L++ H G+++RD KP N+++D + +R+ D GLA G+ RV
Sbjct: 149 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 208
Query: 279 TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ + PE ++D + Y YS D +S GC+ MI + PF
Sbjct: 209 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
+++L Y+ + +V +M GG+L I + F A + +E+LH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA 134
Query: 236 IGLVYRDCKPENIL-LDDYGH---VRISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDN 290
G+V+RD KP NIL +D+ G+ +RI D G A ++ E + T ++APEV++
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ Y + D +S G L++ M+ G PF
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLI-EKQILQKINSRFVV--- 177
LGKG FG V C+ G + E QIL+ ++S F+V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 178 SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
++Y + +L LV+ + G L+ + D +R Y++++ G+E+L
Sbjct: 79 GVSYG-PGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSRR 135
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES---VR-GRVGTVGYMAPEVIDNEKY 293
V+RD NIL++ HV+I+D GLA +P + VR + + APE + + +
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 294 TYSPDWFSFGCLIFEM 309
+ D +SFG +++E+
Sbjct: 196 SRQSDVWSFGVVLYEL 211
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVR 274
+ AA++ G+ ++ + V+RD NIL+ + +++D GLA I + E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLI-EKQILQKINSRFVV--- 177
LGKG FG V C+ G + E QIL+ ++S F+V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 178 SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
++Y + +L LV+ + G L+ + D +R Y++++ G+E+L
Sbjct: 91 GVSYG-PGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSRR 147
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES---VR-GRVGTVGYMAPEVIDNEKY 293
V+RD NIL++ HV+I+D GLA +P + VR + + APE + + +
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 294 TYSPDWFSFGCLIFEM 309
+ D +SFG +++E+
Sbjct: 208 SRQSDVWSFGVVLYEL 223
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 212 PGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE 271
PG + + L GL+ LH +V+RD KPENIL+ G V+++D GLA
Sbjct: 107 PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 166
Query: 272 SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDR 330
++ V T+ Y APEV+ Y D +S GC+ EM FRR+ E D+
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM------FRRKPLFCGNSEADQ 219
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 212 PGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE 271
PG + + L GL+ LH +V+RD KPENIL+ G V+++D GLA
Sbjct: 107 PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 166
Query: 272 SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDR 330
++ V T+ Y APEV+ Y D +S GC+ EM FRR+ E D+
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM------FRRKPLFCGNSEADQ 219
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ R+ LG+G FGEV T ++ L E Q+++K
Sbjct: 6 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEAFLQEAQVMKK 60
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIARARFYAAEVLC 228
+ +V L YA +++ + +V M+ G L + + GE G + + AA++
Sbjct: 61 LRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPE 286
G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G + + APE
Sbjct: 117 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 287 VIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
+ T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSP 57
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDI 216
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGCL---LDFLKGEMGKYLRL 113
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVR 274
+ AA++ G+ ++ + V+RD + NIL+ + +++D GLA I + E + +
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
G + + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 227
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
KT+ +G G +G VC+ + +G+ A + E +L+ +
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKR-AYRELLLLKHMQH 82
Query: 174 RFVVSLAYAYETKDAL------CLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
V+ L + +L LV+ M K MG + F + ++ ++L
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI----MGLK--FSEEKIQYLVYQML 136
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
GL+++H G+V+RD KP N+ +++ ++I D GLA + G V T Y APEV
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEV 194
Query: 288 IDN-EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSDD 346
I + Y + D +S GC++ EM+ G+ F+ + + + ++ + ++ + +D
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254
Query: 347 XXXXXXXXXXXSPR 360
+PR
Sbjct: 255 AAKSYIQSLPQTPR 268
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG V R K ++ E QI+ ++++ ++V L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ +AL LV+ + GG L H + +G ++ +V G+++L V+R
Sbjct: 404 VCQA-EALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESV----RGRVGTVGYMAPEVIDNEKYTYSP 297
+ N+LL + + +ISD GL+ + +S + + APE I+ K++
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 520
Query: 298 DWFSFGCLIFEMIE-GQAPFRRRK 320
D +S+G ++E + GQ P+++ K
Sbjct: 521 DVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ R+ LG+G FGEV T ++ L E Q+++K
Sbjct: 4 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGTMSPEAFLQEAQVMKK 58
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIARARFYAAEVLC 228
+ +V L YA +++ + +V M+ G L + + GE G + + AA++
Sbjct: 59 LRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPE 286
G+ ++ + V+RD + NIL+ + +++D GLA I + E + +G + + APE
Sbjct: 115 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 287 VIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 216
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLI-EKQILQKINSRFVV--- 177
LGKG FG V C+ G + E QIL+ ++S F+V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 178 SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
++Y + L LV+ + G L+ + D +R Y++++ G+E+L
Sbjct: 75 GVSYG-PGRPELRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSRR 131
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIP--EGESVRGRVG--TVGYMAPEVIDNEKY 293
V+RD NIL++ HV+I+D GLA +P + V G + + APE + + +
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 294 TYSPDWFSFGCLIFEM 309
+ D +SFG +++E+
Sbjct: 192 SRQSDVWSFGVVLYEL 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G +G V + R T ++ A S L E +L+++ + +V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS-ALREICLLKELKHKNIVRLHD 68
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ L LV + DLK + + G+ +I ++ + ++L GL H +++R
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLF--QLLKGLGFCHSRNVLHR 125
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDNEK-YTYSP 297
D KP+N+L++ G ++++D GLA G VR V T+ Y P+V+ K Y+ S
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 298 DWFSFGCLIFEMIEGQAPF 316
D +S GC+ E+ P
Sbjct: 184 DMWSAGCIFAELANAARPL 202
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GESVR-- 274
RA A+ L H G+++RD KP NIL+ V++ D G+A I + G SV
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+GT Y++PE + D +S GC+++E++ G+ PF
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VC+ +G A + E ++L+ + V+ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 117
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 118 VFTPATSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D GLA + + G V T Y APE++ N Y
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 231 MTVDIWSVGCIMAELLTGRTLF 252
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG+G + V + + T + A + E +L+ + +V+L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHD 67
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
T+ +L LV ++ DLK ++ + G ++ + + ++L GL + H +++R
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 242 DCKPENILLDDYGHVRISDLGL--AVEIPEGESVRGRVGTVGYMAPEV-IDNEKYTYSPD 298
D KP+N+L+++ G ++++D GL A IP ++ V T+ Y P++ + + Y+ D
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAKSIPT-KTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 299 WFSFGCLIFEMIEGQAPF 316
+ GC+ +EM G+ F
Sbjct: 184 MWGVGCIFYEMATGRPLF 201
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 17/235 (7%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM 160
T+ + + I ++ R+ LG+G FGEV T ++
Sbjct: 172 TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-----AIKTLKPGNMSPEA 226
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPG--FDIAR 218
L E Q+++K+ +V L YA +++ + +V M+ G L + + GE G + +
Sbjct: 227 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSL---LDFLKGEMGKYLRLPQ 282
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGR 276
AA++ G+ ++ + V+RD + NIL+ + +++D GL I + E + +G
Sbjct: 283 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGA 342
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM-IEGQAPFRRRKEMVKRDEVDR 330
+ + APE ++T D +SFG L+ E+ +G+ P+ MV R+ +D+
Sbjct: 343 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQ 394
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 212 PGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE 271
PG + + L GL+ LH +V+RD KPENIL+ G V+++D GLA
Sbjct: 107 PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 166
Query: 272 SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDR 330
++ V T+ Y APEV+ Y D +S GC+ EM FRR+ E D+
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM------FRRKPLFCGNSEADQ 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG+V Q + T + A ++E IL + +V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILASCDHPNIVKLLD 101
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A+ ++ L +++ GG + + + E ++ + + L L +LH +++R
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR---VGTVGYMAPEVI-----DNEKY 293
D K NIL G ++++D G++ + +++ R +GT +MAPEV+ + Y
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 294 TYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
Y D +S G + EM E + P M
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHELNPM 246
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ +T ++ LG G FGEV K+ L E ++++
Sbjct: 18 VPRETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQ 72
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+ + +V L YA T++ + ++ M G L + G I + AA++ G+
Sbjct: 73 LQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGM 130
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVI 288
+ ++RD + NIL+ D +I+D GLA +E E + G + + APE I
Sbjct: 131 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 190
Query: 289 DNEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
+ +T D +SFG L+ E++ G+ P+
Sbjct: 191 NYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLA 180
VLGKG FG+ R TG++ + L E ++++ + V+
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEET---QRTFLKEVKVMRCLEHPNVLKFI 73
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
L + + GG L+ I +M + + ++ +A ++ G+ +LH + +++
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 241 RDCKPENILLDDYGHVRISDLGLA---------------VEIPEGESVRGRVGTVGYMAP 285
RD N L+ + +V ++D GLA ++ P+ + VG +MAP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMI 310
E+I+ Y D FSFG ++ E+I
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 14/236 (5%)
Query: 87 ENYELEMDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXX 146
E+ E+ + + +R S +++ + F +LG+GGFG+V ++ A G + A
Sbjct: 8 EDPEVHLGQLKRFSLRELQ-----VASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKR 61
Query: 147 XXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY 206
GE E +++ R ++ L T LV M G + +
Sbjct: 62 LKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
Query: 207 NM-GGEPGFDIARARFYAAEVLCGLEHLHY---IGLVYRDCKPENILLDDYGHVRISDLG 262
+P D + + A GL +LH +++RD K NILLD+ + D G
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 263 LA--VEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
LA ++ + G +G++APE + K + D F +G ++ E+I GQ F
Sbjct: 180 LAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 11/207 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG+V Q + T + A ++E IL + +V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILASCDHPNIVKLLD 101
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A+ ++ L +++ GG + + + E ++ + + L L +LH +++R
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVI-----DNEKYTY 295
D K NIL G ++++D G++ + R +GT +MAPEV+ + Y Y
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 296 SPDWFSFGCLIFEMIEGQAPFRRRKEM 322
D +S G + EM E + P M
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPM 246
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 73
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 74 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 131
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA +E E + G + + APE I+
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 191
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GESVR-- 274
RA A+ L H G+++RD KP NI++ V++ D G+A I + G SV
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+GT Y++PE + D +S GC+++E++ G+ PF
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GESVR-- 274
RA A+ L H G+++RD KP NI++ V++ D G+A I + G SV
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+GT Y++PE + D +S GC+++E++ G+ PF
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GESVR-- 274
RA A+ L H G+++RD KP NI++ V++ D G+A I + G SV
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+GT Y++PE + D +S GC+++E++ G+ PF
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+L++ ++I D GLA + PE + +
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 69
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 70 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 127
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA +E E + G + + APE I+
Sbjct: 128 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 187
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ +T ++ LG G FGEV K+ L E ++++
Sbjct: 19 VPRETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQ 73
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+ + +V L YA T++ + ++ M G L + G I + AA++ G+
Sbjct: 74 LQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGM 131
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVI 288
+ ++RD + NIL+ D +I+D GLA +E E + G + + APE I
Sbjct: 132 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 191
Query: 289 DNEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
+ +T D +SFG L+ E++ G+ P+
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 117 RMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQKINSRF 175
++ V+G G FGEVC +++A GK +C + L E I+ +
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + ++ M G L + G+ F + + + G+ +L
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--FTVIQLVGMLRGIASGMRYLAE 136
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG------YMAPEVID 289
+ V+RD NIL++ ++SD GL+ + E S ++G + APE I
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 290 NEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
K+T + D +S+G +++E++ G+ P+
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPY 224
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYAC 682
F + I ++ V+G G FGEVC +++A GK +C
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC 46
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQ 169
I ++ +V+G G FGEVC+ +++ GK C + L E I+
Sbjct: 26 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMG 85
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
+ + ++ L + ++ M G L + G F + + + G
Sbjct: 86 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSG 143
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRGRVGTVGYMAP 285
+++L + V+RD NIL++ ++SD G++ + PE + RG + + AP
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I K+T + D +S+G +++E++ G+ P+
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYAC 682
F + I ++ +V+G G FGEVC+ +++ GK C
Sbjct: 22 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC 59
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 162 LIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
L E I++++ +V A L +V ++ G L ++ G D R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 222 YAAEVLCGLEHLHYIG--LVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGRVG 278
A +V G+ +LH +V+R+ K N+L+D V++ D GL+ ++ S + G
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG 201
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
T +MAPEV+ +E D +SFG +++E+ Q P+
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 11/207 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG G FG+V Q + T + A ++E IL + +V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILASCDHPNIVKLLD 101
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A+ ++ L +++ GG + + + E ++ + + L L +LH +++R
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-VGTVGYMAPEVI-----DNEKYTY 295
D K NIL G ++++D G++ + R +GT +MAPEV+ + Y Y
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 296 SPDWFSFGCLIFEMIEGQAPFRRRKEM 322
D +S G + EM E + P M
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPM 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 16/238 (6%)
Query: 103 DIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVL 162
+ Y + K ++ + +GKG FG+V R C L
Sbjct: 182 EFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA-------QAFL 234
Query: 163 IEKQILQKI-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
E ++ ++ +S V L E K L +V M G L ++ + G +F
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 294
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG 281
+ +V +E+L V+RD N+L+ + ++SD GL E + G++ V
Sbjct: 295 -SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVK 351
Query: 282 YMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR--RKEMVKRDEVDRRVKEDA 336
+ APE + +K++ D +SFG L++E+ G+ P+ R K++V R V++ K DA
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR--VEKGYKMDA 407
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 68
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 69 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 126
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA +E E + G + + APE I+
Sbjct: 127 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 186
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-------------G 275
+E LH GL++RD KP NI V++ D GL + + E + G
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKED 335
+VGT YM+PE I Y++ D FS G ++FE++ PF + E V+ R +K
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDVRNLKFP 246
Query: 336 ---AEKYSCRF 343
+KY C +
Sbjct: 247 PLFTQKYPCEY 257
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 67
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 68 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 125
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA +E E + G + + APE I+
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GESVR-- 274
RA A+ L H G+++RD KP NI++ V++ D G+A I + G SV
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+GT Y++PE + D +S GC+++E++ G+ PF
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 67
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 68 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 125
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA +E E + G + + APE I+
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GESVR-- 274
RA A+ L H G+++RD KP NI++ V++ D G+A I + G SV
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+GT Y++PE + D +S GC+++E++ G+ PF
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 73
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 74 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 131
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA I + E + G + + APE I+
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 191
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I D LA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 27/238 (11%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
L T+++Y + + + + + + +G GG +V + ++YA +
Sbjct: 13 LGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLD 71
Query: 159 S----MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF 214
S + + K LQ+ + + + Y YE D + +M G++ + + + +
Sbjct: 72 SYRNEIAYLNK--LQQHSDKII--RLYDYEITDQY--IYMVMECGNIDLNSW-LKKKKSI 124
Query: 215 DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESV 273
D + Y +L + +H G+V+ D KP N L+ D G +++ D G+A ++ P+ SV
Sbjct: 125 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183
Query: 274 --RGRVGTVGYMAPEVIDNEKYT-----------YSPDWFSFGCLIFEMIEGQAPFRR 318
+VGTV YM PE I + + D +S GC+++ M G+ PF++
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 72
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 73 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 130
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA I + E + G + + APE I+
Sbjct: 131 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 190
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 77
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 78 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 135
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA I + E + G + + APE I+
Sbjct: 136 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 195
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +I++ ++ ++ L +E + LV+ + GG+L + + D AR
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI---M 129
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENIL-LDDY--GHVRISDLGLAVEIPEGESVRGRVGTV 280
+VL + + H + + +RD KPEN L L D +++ D GLA G+ +R +VGT
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP 189
Query: 281 GYMAPEVIDNEKYTYSP--DWFSFGCLIFEMIEGQAPF 316
Y++P+V++ Y P D +S G +++ ++ G PF
Sbjct: 190 YYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 66
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 67 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 126
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+RD N ++ V+I D G+ +I E + R G
Sbjct: 127 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 186
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 187 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +I++ ++ ++ L +E + LV+ + GG+L + + D AR
Sbjct: 56 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI---M 112
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENIL-LDDY--GHVRISDLGLAVEIPEGESVRGRVGTV 280
+VL + + H + + +RD KPEN L L D +++ D GLA G+ +R +VGT
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP 172
Query: 281 GYMAPEVIDNEKYTYSP--DWFSFGCLIFEMIEGQAPF 316
Y++P+V++ Y P D +S G +++ ++ G PF
Sbjct: 173 YYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGES---VRGR 276
++ ++L GL+++H +++RD KP N+LL+ ++I D GLA V P+ + +
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 277 VGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPF 316
V T Y APE++ N K YT S D +S GC++ EM+ + F
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 69
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+RD N ++ V+I D G+ +I E + R G
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRGRVG 278
+ Y ++L L ++H IG+ +RD KP+N+LLD G +++ D G A + GE +
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC 203
Query: 279 TVGYMAPEVI-DNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ Y APE+I YT + D +S GC++ E+++GQ F
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 16/219 (7%)
Query: 110 PITYKTFR--MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI 167
PI + + R + +G G FG + + T ++ A ++++I
Sbjct: 14 PIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN------VQREI 67
Query: 168 LQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAE 225
+ + R +V T L +++ +GG+L I N G F ARF+ +
Sbjct: 68 INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQ 124
Query: 226 VLCGLEHLHYIGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGYM 283
+L G+ + H + + +RD K EN LLD ++I D G + + VGT Y+
Sbjct: 125 LLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI 184
Query: 284 APEVIDNEKYTYS-PDWFSFGCLIFEMIEGQAPFRRRKE 321
APEV+ ++Y D +S G ++ M+ G PF +E
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 69
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+RD N ++ V+I D G+ +I E + R G
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 67
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 68 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 125
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA I + E + G + + APE I+
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 185
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 16/238 (6%)
Query: 103 DIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVL 162
+ Y + K ++ + +GKG FG+V R C L
Sbjct: 10 EFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA-------QAFL 62
Query: 163 IEKQILQKI-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
E ++ ++ +S V L E K L +V M G L ++ + G +F
Sbjct: 63 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 122
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG 281
+ +V +E+L V+RD N+L+ + ++SD GL E + G++ V
Sbjct: 123 -SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVK 179
Query: 282 YMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR--RKEMVKRDEVDRRVKEDA 336
+ APE + +K++ D +SFG L++E+ G+ P+ R K++V R V++ K DA
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR--VEKGYKMDA 235
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 62
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 63 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 120
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVIDNE 291
++RD + NIL+ D +I+D GLA I + E + G + + APE I+
Sbjct: 121 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 180
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 117 RMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQKINSRF 175
++ V+G G FGEVC +++A GK +C + L E I+ +
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
++ L + ++ M G L + G+ F + + + G+ +L
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--FTVIQLVGMLRGIASGMRYLAE 134
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG------YMAPEVID 289
+ V+RD NIL++ ++SD GL+ + E S ++G + APE I
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 290 NEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
K+T + D +S+G +++E++ G+ P+
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPY 222
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYAC 682
F + I ++ V+G G FGEVC +++A GK +C
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC 44
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G G +G VCA TG A + E ++L+ + V+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 180 ----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
A + E + + LV +M G DL N+ +F ++L GL+++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLN----NIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN-EKYT 294
+++RD KP N+ +++ ++I GLA + + G V T Y APE++ N Y
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
+ D +S GC++ E++ G+ F
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 162 LIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
L E I++++ +V A L +V ++ G L ++ G D R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 222 YAAEVLCGLEHLHYIG--LVYRDCKPENILLDDYGHVRISDLGLA-VEIPEGESVRGRVG 278
A +V G+ +LH +V+RD K N+L+D V++ D GL+ ++ + G
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAG 201
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
T +MAPEV+ +E D +SFG +++E+ Q P+
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 189 LCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH---YIGLVYRDCKP 245
LCLV+ GG L + P + +A ++ G+ +LH + +++RD K
Sbjct: 81 LCLVMEFARGGPLNRVLSGKRIPPDILVN----WAVQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 246 ENILL------DDYGH--VRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP 297
NIL+ D + ++I+D GLA E + G +MAPEVI ++
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMAPEVIRASMFSKGS 195
Query: 298 DWFSFGCLIFEMIEGQAPFR 317
D +S+G L++E++ G+ PFR
Sbjct: 196 DVWSYGVLLWELLTGEVPFR 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQ 169
I ++ +V+G G FGEVC+ +++ GK C + L E I+
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMG 64
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
+ + ++ L + ++ M G L + G F + + + G
Sbjct: 65 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSG 122
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRGRVGTVGYMAP 285
+++L + V+RD NIL++ ++SD G++ + PE + RG + + AP
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I K+T + D +S+G +++E++ G+ P+
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYAC 682
F + I ++ +V+G G FGEVC+ +++ GK C
Sbjct: 1 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC 38
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQ 169
I ++ +V+G G FGEVC+ +++ GK C + L E I+
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMG 70
Query: 170 KINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
+ + ++ L + ++ M G L + G F + + + G
Sbjct: 71 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSG 128
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRGRVGTVGYMAP 285
+++L + V+RD NIL++ ++SD G++ + PE + RG + + AP
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I K+T + D +S+G +++E++ G+ P+
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYAC 682
F + I ++ +V+G G FGEVC+ +++ GK C
Sbjct: 7 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC 44
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 110 PITYKTFR--MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVL-IEKQ 166
PI + + R + + +G G FG + + + ++ A GE + ++++
Sbjct: 13 PIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-------GEKIAANVKRE 65
Query: 167 ILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
I+ + R +V T L +V+ +GG+L I N G F ARF+
Sbjct: 66 IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQ 122
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGY 282
+++ G+ + H + + +RD K EN LLD ++I D G + + VGT Y
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 182
Query: 283 MAPEVIDNEKYTYS-PDWFSFGCLIFEMIEGQAPFRRRKE 321
+APEV+ ++Y D +S G ++ M+ G PF +E
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 16/221 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+VLG G G+V C R TG+ A + Q +V +
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH-------WQASGGPHIVCI 68
Query: 180 AYAYET----KDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
YE K L +++ M GG+L F G+ F A ++ ++ LH
Sbjct: 69 LDVYENMHHGKRCLLIIMECMEGGEL-FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 236 IGLVYRDCKPENILL---DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+ +RD KPEN+L + ++++D G A E + +++ T Y+APEV+ EK
Sbjct: 128 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVLGPEK 186
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVK 333
Y S D +S G +++ ++ G PF + RR++
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 16/230 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ K ++ + +GKG FG+V R C L E ++ +
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA-------QAFLAEASVMTQ 55
Query: 171 I-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
+ +S V L E K L +V M G L ++ + G +F + +V
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEA 114
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVID 289
+E+L V+RD N+L+ + ++SD GL E + G++ V + APE +
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVKWTAPEALR 172
Query: 290 NEKYTYSPDWFSFGCLIFEMIE-GQAPFRR--RKEMVKRDEVDRRVKEDA 336
+K++ D +SFG L++E+ G+ P+ R K++V R V++ K DA
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR--VEKGYKMDA 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
Y YE D + +M G++ + + + + D + Y +L + +H G+V+
Sbjct: 75 YDYEITDQY--IYMVMECGNIDLNSW-LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 131
Query: 241 RDCKPENILLDDYGHVRISDLGLAVEI-PEGESV--RGRVGTVGYMAPEVIDNEKYT--- 294
D KP N L+ D G +++ D G+A ++ P+ SV +VGTV YM PE I + +
Sbjct: 132 SDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 295 --------YSPDWFSFGCLIFEMIEGQAPFRR 318
D +S GC+++ M G+ PF++
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 185 TKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCK 244
T L +V+ +GG+L I N G F ARF+ +++ G+ + H + + +RD K
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYAHAMQVAHRDLK 142
Query: 245 PENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYS-PDWFS 301
EN LLD ++I+D G + + VGT Y+APEV+ ++Y D +S
Sbjct: 143 LENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWS 202
Query: 302 FGCLIFEMIEGQAPFRRRKE 321
G ++ M+ G PF +E
Sbjct: 203 CGVTLYVMLVGAYPFEDPEE 222
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
Y YE D + +M G++ + + + + D + Y +L + +H G+V+
Sbjct: 78 YDYEITDQY--IYMVMECGNIDLNSW-LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 134
Query: 241 RDCKPENILLDDYGHVRISDLGLAVEI-PEGESV--RGRVGTVGYMAPEVIDNEKYT--- 294
D KP N L+ D G +++ D G+A ++ P+ SV +VGTV YM PE I + +
Sbjct: 135 SDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 295 --------YSPDWFSFGCLIFEMIEGQAPFRR 318
D +S GC+++ M G+ PF++
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 11/237 (4%)
Query: 98 RLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXX 156
R ST+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 17 RGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 76
Query: 157 GESMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDI 216
L E I+ + + ++ L + +V M G L + + F +
Sbjct: 77 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTV 134
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-S 272
+ + G+++L +G V+RD NIL++ ++SD GL+ + PE +
Sbjct: 135 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 273 VRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
RG + + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 248
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 16/221 (7%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL 179
+VLG G G+V C R TG+ A + Q +V +
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH-------WQASGGPHIVCI 87
Query: 180 AYAYET----KDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
YE K L +++ M GG+L F G+ F A ++ ++ LH
Sbjct: 88 LDVYENMHHGKRCLLIIMECMEGGEL-FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 236 IGLVYRDCKPENILL---DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEK 292
+ +RD KPEN+L + ++++D G A E + +++ T Y+APEV+ EK
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVLGPEK 205
Query: 293 YTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVK 333
Y S D +S G +++ ++ G PF + RR++
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 246
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
Y YE D + +M G++ + + + + D + Y +L + +H G+V+
Sbjct: 122 YDYEITDQY--IYMVMECGNIDLNSW-LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178
Query: 241 RDCKPENILLDDYGHVRISDLGLAVEI-PEGESV--RGRVGTVGYMAPEVIDNEKYT--- 294
D KP N L+ D G +++ D G+A ++ P+ SV +VGTV YM PE I + +
Sbjct: 179 SDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 295 --------YSPDWFSFGCLIFEMIEGQAPFRR 318
D +S GC+++ M G+ PF++
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 159 SMVLIEKQILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDI 216
+ V +E +L+K++S F V+ L +E D+ L+L F G ++
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLD-DYGHVRISDLGLAVEIPEGESVRG 275
AR+ F+ +VL + H H G+++RD K ENIL+D + G +++ D G G ++
Sbjct: 159 ARSFFW--QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKD 210
Query: 276 RV-----GTVGYMAPEVIDNEKY-TYSPDWFSFGCLIFEMIEGQAPFRRRKEMVK 324
V GT Y PE I +Y S +S G L+++M+ G PF +E+++
Sbjct: 211 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G +G V + R T ++ A S L E +L+++ + +V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS-ALREICLLKELKHKNIVRLHD 68
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ L LV + DLK + + G+ +I ++ + ++L GL H +++R
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLF--QLLKGLGFCHSRNVLHR 125
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTVGYMAPEVIDNEK-YTYSP 297
D KP+N+L++ G +++++ GLA G VR V T+ Y P+V+ K Y+ S
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 298 DWFSFGCLIFEMIEGQAPF 316
D +S GC+ E+ P
Sbjct: 184 DMWSAGCIFAELANAGRPL 202
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ + +G G +G V + + R TG+ A + L E +IL+
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKR-TLRELKILKHFKHDN 114
Query: 176 VVSL------AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++++ Y ++ +VL +M DL I++ +P + R++ ++L G
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHS--SQP-LTLEHVRYFLYQLLRG 170
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRGRVGTVGYMA 284
L+++H +++RD KP N+L+++ ++I D G+A + + + V T Y A
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 285 PEVIDN-EKYTYSPDWFSFGCLIFEMI 310
PE++ + +YT + D +S GC+ EM+
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ + +G G +G V + + R TG+ A + L E +IL+
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKR-TLRELKILKHFKHDN 115
Query: 176 VVSL------AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
++++ Y ++ +VL +M DL I++ +P + R++ ++L G
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHS--SQP-LTLEHVRYFLYQLLRG 171
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRGRVGTVGYMA 284
L+++H +++RD KP N+L+++ ++I D G+A + + + V T Y A
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 285 PEVIDN-EKYTYSPDWFSFGCLIFEMI 310
PE++ + +YT + D +S GC+ EM+
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEML 258
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 20/147 (13%)
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI--ARARFYAAEV 226
+VSL + ++ + L+ M G+LK H+Y +M E +I AR
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR------ 150
Query: 227 LCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE-GESVRGRV--GTVGYM 283
GL +LH +++RD K NILLD+ +I+D G++ + E G++ V GT+GY+
Sbjct: 151 --GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMI 310
PE + T D +SFG ++FE++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
Y YE D + +M G++ + + + + D + Y +L + +H G+V+
Sbjct: 122 YDYEITDQY--IYMVMECGNIDLNSW-LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178
Query: 241 RDCKPENILLDDYGHVRISDLGLAVEI-PEGESV--RGRVGTVGYMAPEVIDNEKYT--- 294
D KP N L+ D G +++ D G+A ++ P+ SV +VGTV YM PE I + +
Sbjct: 179 SDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 295 --------YSPDWFSFGCLIFEMIEGQAPFRR 318
D +S GC+++ M G+ PF++
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 11/235 (4%)
Query: 100 STKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGE 158
ST+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQ 119
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVR 274
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + R
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
G + + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 231
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
Y YE D + +M G++ + + + + D + Y +L + +H G+V+
Sbjct: 74 YDYEITDQY--IYMVMECGNIDLNSW-LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 130
Query: 241 RDCKPENILLDDYGHVRISDLGLAVEI-PEGESV--RGRVGTVGYMAPEVIDNEKYT--- 294
D KP N L+ D G +++ D G+A ++ P+ SV +VGTV YM PE I + +
Sbjct: 131 SDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 295 --------YSPDWFSFGCLIFEMIEGQAPFRR 318
D +S GC+++ M G+ PF++
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI--ARARFYAAEV 226
+VSL + ++ + L+ M G+LK H+Y +M E +I AR
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR------ 150
Query: 227 LCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA---VEIPEGESVRGRVGTVGYM 283
GL +LH +++RD K NILLD+ +I+D G++ E+ + GT+GY+
Sbjct: 151 --GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMI 310
PE + T D +SFG ++FE++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL-QKINSRFVVSL 179
VLG+G V C T + YA S V E ++L Q R V+ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI---RSRVFREVEMLYQCQGHRNVLEL 76
Query: 180 AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E +D LV M GG + HI+ F+ A +V L+ LH G+
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 240 YRDCKPENILLDDYGH---VRISDLGLA-----------VEIPEGESVRGRVGTVGYMAP 285
+RD KPENIL + V+I D GL + PE + G+ YMAP
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE---LLTPCGSAEYMAP 190
Query: 286 EVID---NEKYTYSP--DWFSFGCLIFEMIEGQAPFRRR 319
EV++ E Y D +S G +++ ++ G PF R
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 117 RMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQKINSRF 175
++ +V+G G FGEVC+ ++ GK + L E I+ + +
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V+ L + ++ M G L + G+ F + + + G+++L
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYLAD 153
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA------VEIPEGESVRGRVGTVGYMAPEVID 289
+ V+RD NIL++ ++SD GL+ P S G + + APE I
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 290 NEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
K+T + D +S+G +++E++ G+ P+
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPY 241
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 645 FPQPITYKTFRMYRVLGKGGFGEVCACQVRATGK 678
F + I ++ +V+G G FGEVC+ ++ GK
Sbjct: 26 FAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK 59
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---------- 274
++ +E LH GL++RD KP NI V++ D GL + + E +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 275 ---GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
G+VGT YM+PE I Y++ D FS G ++FE++
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 99 LSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGE 158
L T+++Y + + + + + + +G GG +V + ++YA +
Sbjct: 13 LGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLD 71
Query: 159 S----MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF 214
S + + K LQ+ + + + Y YE D + +M G++ + + + +
Sbjct: 72 SYRNEIAYLNK--LQQHSDKII--RLYDYEITDQY--IYMVMECGNIDLNSW-LKKKKSI 124
Query: 215 DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESV 273
D + Y +L + +H G+V+ D KP N L+ D G +++ D G+A ++ P+ V
Sbjct: 125 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXV 183
Query: 274 --RGRVGTVGYMAPEVIDNEKYT-----------YSPDWFSFGCLIFEMIEGQAPFRR 318
+VGTV YM PE I + + D +S GC+++ M G+ PF++
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG-ESVR 274
+A+ +A ++ G+ +LH ++RD N+LLD+ V+I D GLA +PEG E R
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR 192
Query: 275 GRV---GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI----EGQAPFRRRKEMV 323
R V + APE + K+ Y+ D +SFG ++E++ Q+P + E++
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 11/235 (4%)
Query: 100 STKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGE 158
ST+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 159 SMVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR 218
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQ 119
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVR 274
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + R
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
G + + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 10/218 (4%)
Query: 102 KDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMV 161
K + + + +T ++ LG G GEV K+
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAF 55
Query: 162 LIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
L E +++++ + +V L YA T++ + ++ M G L + G I +
Sbjct: 56 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLD 113
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGESVRGRVGT 279
AA++ G+ + ++RD + NIL+ D +I+D GLA +E E + G
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 280 VGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
+ + APE I+ +T D +SFG L+ E++ G+ P+
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GLA + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 209 GGEPGFDIARARFY----AAEVLCGL----EHLHYIGLVYRDCKPENIL-LDDYGH---V 256
GGE I R +F+ A+ VL + E+LH G+V+RD KP NIL +D+ G+ +
Sbjct: 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESI 159
Query: 257 RISDLGLAVEI-PEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAP 315
RI D G A ++ E + T ++APEV++ + Y + D +S G L++ + G P
Sbjct: 160 RICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
Query: 316 F 316
F
Sbjct: 220 F 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 23/239 (9%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI-LQKINSRFVVSLA 180
LG+G +G V + +G++ A + +L++ I ++ ++ F V+
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFY 116
Query: 181 YAYETKDALCLVLTIMNGGDLKFH--IYNMGGEPGFDIARARFYAAEVLCGLEHLHY-IG 237
A + + + + +M+ KF+ + + G DI A ++ LEHLH +
Sbjct: 117 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEHLHSKLS 174
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVID---NEK-Y 293
+++RD KP N+L++ G V++ D G++ + + + G YMAPE I+ N+K Y
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 294 TYSPDWFSFGCLIFEMI-------EGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSD 345
+ D +S G + E+ PF++ K++V+ + + A+K+S F D
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLPADKFSAEFVD 289
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 66/161 (40%), Gaps = 4/161 (2%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E ++ K +V L D LCLV G L + + G P A
Sbjct: 71 EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIA 130
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA---VEIPEGESVRGRVGTV 280
G+ LH ++RD K NILLD+ +ISD GLA + + VGT
Sbjct: 131 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTT 190
Query: 281 GYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKE 321
Y APE + E T D +SFG ++ E+I G +E
Sbjct: 191 AYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
+T ++ LG G FGEV K+ L E +++++
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKV-----AVKSLKQGSMSPDAFLAEANLMKQLQH 63
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ +V L YA T++ + ++ M G L + G I + AA++ G+ +
Sbjct: 64 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFI 121
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVIDNE 291
++R+ + NIL+ D +I+D GLA I + E + G + + APE I+
Sbjct: 122 EERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 292 KYTYSPDWFSFGCLIFEMI-EGQAPF 316
+T D +SFG L+ E++ G+ P+
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 69
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+RD N ++ V+I D G+ +I E + R G
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 110 PITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQ 166
PI + + + + + +G G FG + + + ++ A GE + ++++
Sbjct: 12 PIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-------GEKIDENVKRE 64
Query: 167 ILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
I+ + R +V T L +V+ +GG+L I N G F ARF+
Sbjct: 65 IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQ 121
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGY 282
+++ G+ + H + + +RD K EN LLD ++I D G + + VGT Y
Sbjct: 122 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 181
Query: 283 MAPEVIDNEKYTYS-PDWFSFGCLIFEMIEGQAPFRRRKE 321
+APEV+ ++Y D +S G ++ M+ G PF +E
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 229 GLEHL-HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
L HL + +++RD KP NILLD G++++ D G++ ++ + + G YMAPE
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPER 196
Query: 288 ID----NEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEVDRRVKEDAEKYS 340
ID + Y D +S G ++E+ G+ P+ + + D++ + VK D + S
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQLTQVVKGDPPQLS 251
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 119 YRVLGK-GGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVV 177
+ ++G+ G FG+V Q + T + A ++E IL + +V
Sbjct: 14 WEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILASCDHPNIV 70
Query: 178 SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
L A+ ++ L +++ GG + + + E ++ + + L L +LH
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR--GRVGTVGYMAPEVI-----DN 290
+++RD K NIL G ++++D G++ + R +GT +MAPEV+ +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
Y Y D +S G + EM E + P M
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPHHELNPM 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG+G FGEV + + TG + C E M + S +V L
Sbjct: 82 LGRGSFGEVHRMEDKQTG--FQCAVKKVRLEVFRAEELMACA------GLTSPRIVPLYG 133
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A + + + ++ GG L + G P RA +Y + L GLE+LH +++
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHSRRILHG 190
Query: 242 DCKPENILL-DDYGHVRISDLGLAVEI-PEG---ESVRGR--VGTVGYMAPEVIDNEKYT 294
D K +N+LL D H + D G AV + P+G + + G GT +MAPEV+
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S C++ M+ G P+
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHPW 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 30 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 89
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 147
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 148 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 258
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGT 279
+++ +L GL LH G+V+RD P NILL D + I D LA E + V
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 280 VGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFR 317
Y APE++ K +T D +S GC++ EM +A FR
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 23/239 (9%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI-LQKINSRFVVSLA 180
LG+G +G V + +G++ A + +L++ I ++ ++ F V+
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFY 72
Query: 181 YAYETKDALCLVLTIMNGGDLKFH--IYNMGGEPGFDIARARFYAAEVLCGLEHLHY-IG 237
A + + + + +M+ KF+ + + G DI A ++ LEHLH +
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEHLHSKLS 130
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVID---NEK-Y 293
+++RD KP N+L++ G V++ D G++ + + + G YMAPE I+ N+K Y
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 294 TYSPDWFSFGCLIFEMI-------EGQAPFRRRKEMVKRDEVDRRVKEDAEKYSCRFSD 345
+ D +S G + E+ PF++ K++V+ + + A+K+S F D
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLPADKFSAEFVD 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL+ + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGT 279
+++ +L GL LH G+V+RD P NILL D + I D LA E + V
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 280 VGYMAPEVIDNEK-YTYSPDWFSFGCLIFEMIEGQAPFR 317
Y APE++ K +T D +S GC++ EM +A FR
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 68
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 69 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 128
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+RD N ++ V+I D G+ +I E + R G
Sbjct: 129 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 189 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 181 YAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVY 240
Y YE D + +M G++ + + + + D + Y +L + +H G+V+
Sbjct: 122 YDYEITDQY--IYMVMECGNIDLNSW-LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178
Query: 241 RDCKPENILLDDYGHVRISDLGLAVEI-PEGESV--RGRVGTVGYMAPEVIDNEKYT--- 294
D KP N L+ D G +++ D G+A ++ P+ SV +VG V YM PE I + +
Sbjct: 179 SDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237
Query: 295 --------YSPDWFSFGCLIFEMIEGQAPFRR 318
D +S GC+++ M G+ PF++
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXG-----ESMVLIEKQIL 168
+ + + + LGKG +G V R TG++ A E M+L E
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 169 QKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLC 228
+ I + ++++ A +D + LV M DL I EP ++ +++
Sbjct: 69 ENIVN--LLNVLRADNDRD-VYLVFDYMET-DLHAVIRANILEP----VHKQYVVYQLIK 120
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--------------VEIPEGES-- 272
+++LH GL++RD KP NILL+ HV+++D GL+ + I E
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 273 ------VRGRVGTVGYMAPEV-IDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
+ V T Y APE+ + + KYT D +S GC++ E++ G+ F
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 69
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+RD N ++ V+I D G+ +I E R G
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG 189
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 48/251 (19%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM--VLIEKQILQKI 171
K + + +G+G +G V T + A + + + E ++++K+
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 172 NSRFVVSLAYAYETKDALCLVLTIMNGGDL--KFHIY--NMGGEPGFDIARARF------ 221
+ + L YE + +CLV+ + +GG L K +++ + G+ D+ + +
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 222 ---------------------------YAAEVLCGLEHLHYIGLVYRDCKPENILL--DD 252
++ L +LH G+ +RD KPEN L +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 253 YGHVRISDLGLAVE---IPEGE--SVRGRVGTVGYMAPEVIDNEKYTYSP--DWFSFGCL 305
+++ D GL+ E + GE + + GT ++APEV++ +Y P D +S G L
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 306 IFEMIEGQAPF 316
+ ++ G PF
Sbjct: 266 LHLLLMGAVPF 276
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR------ 174
++GKG FG+V R + A + IE ++L+ +N
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ----IEVRLLELMNKHDTEMKY 116
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF---DIARARFYAAEVLCGLE 231
++V L + ++ LCLV + L +++Y++ F + R +A ++ L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 232 HLHY--IGLVYRDCKPENILL--DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
L + +++ D KPENILL ++I D G + ++ G+ + + + Y +PEV
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEV 229
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
+ Y + D +S GC++ EM G+ F E+ + +++
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG+G FGEV + + TG + C E + E ++S +V L
Sbjct: 80 LGRGSFGEVHRMKDKQTG--FQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYG 131
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A + + + ++ GG L I MG P RA +Y + L GLE+LH +++
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHTRRILHG 188
Query: 242 DCKPENILLD---------DYGHVR-ISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNE 291
D K +N+LL D+GH + GL + G+ + GT +MAPEV+ +
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI---PGTETHMAPEVVMGK 245
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
D +S C++ M+ G P+
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 11/234 (4%)
Query: 101 TKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVR-ATGKMYACXXXXXXXXXXXXGES 159
T+ ++ + + + +V+G G FGEVC+ +++ + K +
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 160 MVLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARA 219
L E I+ + + ++ L + +V M G L + + F + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQL 149
Query: 220 RFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRG 275
+ G+++L +G V+RD NIL++ ++SD GL + PE + RG
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + +PE I K+T + D +S+G +++E++ G+ P+ EM +D +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---EMSNQDVI 260
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
LG+G FGEV + + TG + C E M + S +V L
Sbjct: 101 LGRGSFGEVHRMEDKQTG--FQCAVKKVRLEVFRAEELMACA------GLTSPRIVPLYG 152
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A + + + ++ GG L + G P RA +Y + L GLE+LH +++
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHSRRILHG 209
Query: 242 DCKPENILL-DDYGHVRISDLGLAVEI-PEG---ESVRGR--VGTVGYMAPEVIDNEKYT 294
D K +N+LL D H + D G AV + P+G + G GT +MAPEV+
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 295 YSPDWFSFGCLIFEMIEGQAPF 316
D +S C++ M+ G P+
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHPW 291
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 157 GESMVLIEKQILQKINSRFVVSLAYAY--ETKDALCLVLTIMNGGDLKFHIYNMGGEPGF 214
GE+ V E Q+L+++ + V+ L E K + +V+ G + + E F
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG--MQEMLDSVPEKRF 106
Query: 215 DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE 271
+ +A Y +++ GLE+LH G+V++D KP N+LL G ++IS LG+A + +
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 272 SVRGRVGTVGYMAPEVIDNEKYTYSP---DWFSFGCLIFEMIEGQAPF 316
+ R G+ + PE I N T+S D +S G ++ + G PF
Sbjct: 167 TCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR------ 174
++GKG FG+V R + A + IE ++L+ +N
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ----IEVRLLELMNKHDTEMKY 97
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF---DIARARFYAAEVLCGLE 231
++V L + ++ LCLV + L +++Y++ F + R +A ++ L
Sbjct: 98 YIVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 152
Query: 232 HLHY--IGLVYRDCKPENILL--DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
L + +++ D KPENILL ++I D G + ++ G+ + + + Y +PEV
Sbjct: 153 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEV 210
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
+ Y + D +S GC++ EM G+ F E+ + +++
Sbjct: 211 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 251
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG-ESVR 274
+A+ +A ++ G+ +LH ++R N+LLD+ V+I D GLA +PEG E R
Sbjct: 110 LAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 275 GRV---GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI----EGQAPFRRRKEMV 323
R V + APE + K+ Y+ D +SFG ++E++ Q+P + E++
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG-ESVR 274
+A+ +A ++ G+ +LH ++R N+LLD+ V+I D GLA +PEG E R
Sbjct: 111 LAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 275 GRV---GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI----EGQAPFRRRKEMV 323
R V + APE + K+ Y+ D +SFG ++E++ Q+P + E++
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG-ESVR 274
+A+ +A ++ G+ +LH ++R+ N+LLD+ V+I D GLA +PEG E R
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 275 GRV---GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI----EGQAPFRRRKEMV 323
R V + APE + K+ Y+ D +SFG ++E++ Q+P + E++
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 231
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTVGYMAPEVIDNEKYTYS 296
+++RD KP N+ LD +V++ D GLA + S + VGT YM+PE ++ Y
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 196
Query: 297 PDWFSFGCLIFEMIEGQAPF 316
D +S GCL++E+ PF
Sbjct: 197 SDIWSLGCLLYELCALMPPF 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 15/221 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM--VLIEKQIL 168
I + F + R+LGKG FG V Q++ + + L E +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 169 QKINSRFV---VSLAYAYETKDAL---CLVLTIMNGGDLK-FHIYNMGGEPGFDIARARF 221
++ + V V ++ K L ++L M GDL F + + GE F++
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 222 --YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGT 279
+ ++ CG+E+L ++RD N +L + V ++D GL+ +I G+ R +
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 280 ---VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPF 316
V ++A E + + YT D ++FG ++E M GQ P+
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG-ESVR 274
+A+ +A ++ G+ +LH ++R+ N+LLD+ V+I D GLA +PEG E R
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 275 GRV---GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI----EGQAPFRRRKEMV 323
R V + APE + K+ Y+ D +SFG ++E++ Q+P + E++
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 231
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 16/230 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ K ++ + +GKG FG+V R C L E ++ +
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA-------QAFLAEASVMTQ 61
Query: 171 I-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
+ +S V L E K L +V M G L ++ + G +F + +V
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEA 120
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVID 289
+E+L V+RD N+L+ + ++SD GL E + G++ V + APE +
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVKWTAPEALR 178
Query: 290 NEKYTYSPDWFSFGCLIFEMIE-GQAPFRR--RKEMVKRDEVDRRVKEDA 336
++ D +SFG L++E+ G+ P+ R K++V R V++ K DA
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR--VEKGYKMDA 226
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR------ 174
++GKG FG+V R + A + IE ++L+ +N
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ----IEVRLLELMNKHDTEMKY 116
Query: 175 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF---DIARARFYAAEVLCGLE 231
++V L + ++ LCLV + L +++Y++ F + R +A ++ L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 232 HLHY--IGLVYRDCKPENILL--DDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEV 287
L + +++ D KPENILL ++I D G + ++ G+ + + + Y +PEV
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEV 229
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRDEV 328
+ Y + D +S GC++ EM G+ F E+ + +++
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL-QKINSRFVVSL 179
VLG+G V C T + YA S V E ++L Q R V+ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI---RSRVFREVEMLYQCQGHRNVLEL 76
Query: 180 AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E +D LV M GG + HI+ F+ A +V L+ LH G+
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 240 YRDCKPENILLDDYGH---VRISDLGLA-----------VEIPEGESVRGRVGTVGYMAP 285
+RD KPENIL + V+I D L + PE + G+ YMAP
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE---LLTPCGSAEYMAP 190
Query: 286 EVID---NEKYTYSP--DWFSFGCLIFEMIEGQAPFRRR 319
EV++ E Y D +S G +++ ++ G PF R
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 69
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+R+ N ++ V+I D G+ +I E + R G
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTVGYMAPEVIDNEKYTYS 296
+++RD KP N+ LD +V++ D GLA + E + VGT YM+PE ++ Y
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEK 196
Query: 297 PDWFSFGCLIFEMIEGQAPF 316
D +S GCL++E+ PF
Sbjct: 197 SDIWSLGCLLYELCALMPPF 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEK----- 165
++ + + R LG+G FG V R K A ES L E+
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEA----ETRVAVKTVNESASLRERIEFLN 70
Query: 166 --QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY-------NMGGEPGFDI 216
+++ VV L +V+ +M GDLK ++ N G P +
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 217 ARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-G 275
AAE+ G+ +L+ V+R+ N ++ V+I D G+ +I E + R G
Sbjct: 131 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 276 RVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +MAPE + + +T S D +SFG +++E+
Sbjct: 191 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-VRGRVGTVGYMAPEVIDNEKYTYS 296
+++RD KP N+ LD +V++ D GLA + S + VGT YM+PE ++ Y
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEK 196
Query: 297 PDWFSFGCLIFEMIEGQAPF 316
D +S GCL++E+ PF
Sbjct: 197 SDIWSLGCLLYELCALMPPF 216
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 22/114 (19%)
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYG-------------HVRISDLGLAVEIPEGE 271
++ G+ HLH + +++RD KP+NIL+ + ISD GL ++ G+
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 272 -----SVRGRVGTVGYMAPEVID---NEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
++ GT G+ APE+++ + T S D FS GC+ + ++ +G+ PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 22/114 (19%)
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYG-------------HVRISDLGLAVEIPEGE 271
++ G+ HLH + +++RD KP+NIL+ + ISD GL ++ G+
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 272 -----SVRGRVGTVGYMAPEVID---NEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
++ GT G+ APE+++ + T S D FS GC+ + ++ +G+ PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 121 VLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL-QKINSRFVVSL 179
+LG+G + +V GK YA S V E + L Q ++ ++ L
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH---SRSRVFREVETLYQCQGNKNILEL 76
Query: 180 AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLV 239
+E LV + GG + HI + F+ A +V L+ LH G+
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQK---QKHFNEREASRVVRDVAAALDFLHTKGIA 133
Query: 240 YRDCKPENILLDD---YGHVRISDLGLAVEIPEGES--------VRGRVGTVGYMAPEVI 288
+RD KPENIL + V+I D L + S + G+ YMAPEV+
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 289 D--NEKYTYSP---DWFSFGCLIFEMIEGQAPF 316
+ ++ T+ D +S G +++ M+ G PF
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K+N + +V ++L +M GGDLK + P + A
Sbjct: 83 MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 143 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FGEV + + TG + C E + E ++S +V L
Sbjct: 82 VGRGSFGEVHRMKDKQTG--FQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYG 133
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A + + + ++ GG L I MG P RA +Y + L GLE+LH +++
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHTRRILHG 190
Query: 242 DCKPENILLD---------DYGHVR-ISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNE 291
D K +N+LL D+GH + GL + G+ + GT +MAPEV+ +
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI---PGTETHMAPEVVMGK 247
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
D +S C++ M+ G P+
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 117 RMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQKINSRF 175
++ +V+G G FGEVC+ ++ GK + L E I+ + +
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V+ L + ++ M G L + G+ F + + + G+++L
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYLAD 127
Query: 236 IGLVYRDCKPENILLDDYGHVRISDLGLA------VEIPEGESVRGRVGTVGYMAPEVID 289
+ V+R NIL++ ++SD GL+ P S G + + APE I
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 290 NEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEVD 329
K+T + D +S+G +++E++ G+ P+ +M +D ++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYW---DMTNQDVIN 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 26/118 (22%)
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYG-------------HVRISDLGLAVEIPEGE 271
++ G+ HLH + +++RD KP+NIL+ + ISD GL ++ G+
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 272 S-----VRGRVGTVGYMAPEVID-------NEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
S + GT G+ APE+++ + T S D FS GC+ + ++ +G+ PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FGEV + + TG + C E + E ++S +V L
Sbjct: 66 VGRGSFGEVHRMKDKQTG--FQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYG 117
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
A + + + ++ GG L I MG P RA +Y + L GLE+LH +++
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHTRRILHG 174
Query: 242 DCKPENILLD---------DYGHVR-ISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNE 291
D K +N+LL D+GH + GL + G+ + GT +MAPEV+ +
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI---PGTETHMAPEVVMGK 231
Query: 292 KYTYSPDWFSFGCLIFEMIEGQAPF 316
D +S C++ M+ G P+
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 96
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K+N + +V ++L +M GGDLK + P + A
Sbjct: 97 MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 156
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 157 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F++ R+ G+G FG V + ++TG M E ++ + +L N
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTG-MSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 176 VVSLAYAYETKDALCLVLTI-MNGGDLKFH-----IYNMGGEPGFDIARARFYAAEVLCG 229
+ S Y +D + L + M H Y P + + + G
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIG 143
Query: 230 LEHLHYIGLVYRDCKPENILLDDY-GHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI 288
HL + + +RD KP N+L+++ G +++ D G A ++ E + + Y APE+I
Sbjct: 144 CLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELI 203
Query: 289 -DNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
N+ YT + D +S GC+ EM+ G+ FR
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 18/220 (8%)
Query: 110 PITYKTFR--MYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQ 166
PI + + R + + +G G FG + + + ++ A GE + ++++
Sbjct: 13 PIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-------GEKIDENVKRE 65
Query: 167 ILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
I+ + R +V T L +V+ +GG+L I N G F ARF+
Sbjct: 66 IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQ 122
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGY 282
+++ G+ + H + + +RD K EN LLD ++I G + + VGT Y
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAY 182
Query: 283 MAPEVIDNEKYTYS-PDWFSFGCLIFEMIEGQAPFRRRKE 321
+APEV+ ++Y D +S G ++ M+ G PF +E
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 83 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 143 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 49 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 108
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 109 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 168
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 169 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 228
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 109 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 168
Q + + + +LG+G V + + TG ++A M E ++L
Sbjct: 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR--EFEVL 61
Query: 169 QKINSRFVVSLAYAYE---TKDALCLVLTIMNGGDLKFHIYNMGGEP--GFDIARARFYA 223
+K+N + +V L +A E T L++ G L Y + EP + + + F
Sbjct: 62 KKLNHKNIVKL-FAIEEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEFLI 116
Query: 224 A--EVLCGLEHLHYIGLVYRDCKPENILL----DDYGHVRISDLGLAVEIPEGESVRGRV 277
+V+ G+ HL G+V+R+ KP NI+ D +++D G A E+ + E
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY 176
Query: 278 GTVGYMAPEVID--------NEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
GT Y+ P++ + +KY + D +S G + G PFR
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F++ +LG+G +G VC+ + TG++ A + L E +IL+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--LREIKILKHFKHEN 70
Query: 176 VVSL-----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
++++ ++E + + ++ +M ++ + +++ + L +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---------PEGES--VRGRVGT 279
+ LH +++RD KP N+L++ +++ D GLA I P G+ + V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 280 VGYMAPEV-IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRD 326
Y APEV + + KY+ + D +S GC++ E+ F RR RD
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL------FLRRPIFPGRD 227
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 83 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 142
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 143 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 39 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 98
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 99 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 158
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 159 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 218
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 18/220 (8%)
Query: 110 PITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQ 166
PI + + + + + +G G FG + + + ++ A GE + ++++
Sbjct: 13 PIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-------GEKIDENVKRE 65
Query: 167 ILQKINSRF--VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
I+ + R +V T L +V+ +GG+L I N G F ARF+
Sbjct: 66 IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQ 122
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDD--YGHVRISDLGLAVEIPEGESVRGRVGTVGY 282
+++ G+ + H + + +RD K EN LLD ++I G + + VGT Y
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAY 182
Query: 283 MAPEVIDNEKYTYS-PDWFSFGCLIFEMIEGQAPFRRRKE 321
+APEV+ ++Y D +S G ++ M+ G PF +E
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 29 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 88
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 89 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 148
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 149 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 81
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 141
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 142 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F++ +LG+G +G VC+ + TG++ A + L E +IL+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--LREIKILKHFKHEN 70
Query: 176 VVSL-----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
++++ ++E + + ++ +M ++ + +++ + L +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-----------VGT 279
+ LH +++RD KP N+L++ +++ D GLA I E + V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 280 VGYMAPEV-IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRD 326
Y APEV + + KY+ + D +S GC++ E+ F RR RD
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL------FLRRPIFPGRD 227
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
F++ +LG+G +G VC+ + TG++ A + L E +IL+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--LREIKILKHFKHEN 70
Query: 176 VVSL-----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
++++ ++E + + ++ +M ++ + +++ + L +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGR-----------VGT 279
+ LH +++RD KP N+L++ +++ D GLA I E + V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 280 VGYMAPEV-IDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEMVKRD 326
Y APEV + + KY+ + D +S GC++ E+ F RR RD
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL------FLRRPIFPGRD 227
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 90/229 (39%), Gaps = 14/229 (6%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFL 96
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 97 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 156
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 157 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V +M PE +T D +SFG L++E+ G P+ +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 14 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 73
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 74 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 133
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 134 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ ++ + LG G FGEV + K+ L E +++
Sbjct: 10 IPRESIKLVKRLGAGQFGEVWMGYYNNSTKV-----AVKTLKPGTMSVQAFLEEANLMKT 64
Query: 171 INSRFVVSLAYAYETKDALCLVLT--IMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLC 228
+ +V L YA T++ ++T + G L F + GG+ + + ++A++
Sbjct: 65 LQHDKLVRL-YAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK--VLLPKLIDFSAQIAE 121
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPE 286
G+ ++ ++RD + N+L+ + +I+D GLA I + E + G + + APE
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 181
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRR 319
I+ +T D +SFG L++E++ G+ P+ R
Sbjct: 182 AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGR 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 12/222 (5%)
Query: 99 LSTKDIYNEIQPITYKT--FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXX 156
+S K E+ P ++ + R LG+G FG+V C+ G
Sbjct: 4 VSEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG 63
Query: 157 GESMVLIEKQI--LQKINSRFVVSLAY--AYETKDALCLVLTIMNGGDLKFHIYNMGGEP 212
G + ++K+I L+ + +V + + + L++ + G LK ++ +
Sbjct: 64 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK- 122
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PE 269
++ + YA ++ G+++L V+RD N+L++ V+I D GL I E
Sbjct: 123 -INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
Query: 270 GESVR-GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI 310
+V+ R V + APE + K+ + D +SFG + E++
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 26/118 (22%)
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYG-------------HVRISDLGLAVEIPEGE 271
++ G+ HLH + +++RD KP+NIL+ + ISD GL ++ G+
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 272 -----SVRGRVGTVGYMAPEVID-------NEKYTYSPDWFSFGCLIFEMI-EGQAPF 316
++ GT G+ APE+++ + T S D FS GC+ + ++ +G+ PF
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 34/263 (12%)
Query: 84 DSIENYELEMDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYA 143
D + NY + N+ + KD Y +R+ R L +G F ++ C+ K YA
Sbjct: 8 DILSNYSNLIYLNKYVKEKDKY-------INDYRIIRTLNQGKFNKIILCE--KDNKFYA 58
Query: 144 CXXXXXXXXX-----XXXGESMVLI---------EKQILQKINSRFVVSLAYAYETKDAL 189
+ I E QI+ I + + ++ D +
Sbjct: 59 LKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEV 118
Query: 190 CLVLTIM-NGGDLKFHIYNMGGEPGFD----IARARFYAAEVLCGLEHLHY-IGLVYRDC 243
++ M N LKF Y + + I + VL ++H + +RD
Sbjct: 119 YIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 244 KPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDNEKYTYSP---DWF 300
KP NIL+D G V++SD G + E + ++G GT +M PE NE +Y+ D +
Sbjct: 179 KPSNILMDKNGRVKLSDFGES-EYMVDKKIKGSRGTYEFMPPEFFSNES-SYNGAKVDIW 236
Query: 301 SFGCLIFEMIEGQAPFRRRKEMV 323
S G ++ M PF + +V
Sbjct: 237 SLGICLYVMFYNVVPFSLKISLV 259
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGK--MYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
R +VLG G FG V G+ +L E ++ + S
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGF-DIARARFYAAEVLCGLEH 232
+V L T + LV +M G L H+ G G D+ + ++ G+ +
Sbjct: 79 PYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLN---WCMQIAKGMSY 134
Query: 233 LHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEGE-SVRGRVGTVGYMAPEVID 289
L + LV+RD N+L+ HV+I+D GLA ++I E E G + +MA E I
Sbjct: 135 LEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 290 NEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
++T+ D +S+G ++E++ G P+
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ ++ + LG G FGEV K+ L E +++
Sbjct: 12 IPRESLKLEKKLGAGQFGEVWMATYNKHTKV-----AVKTMKPGSMSVEAFLAEANVMKT 66
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+ +V L +A TK+ + ++ M G L + + G + + ++A++ G+
Sbjct: 67 LQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGM 124
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVI 288
+ ++RD + NIL+ +I+D GLA I + E + G + + APE I
Sbjct: 125 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 184
Query: 289 DNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +T D +SFG L+ E++ G+ P+
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 81
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V +++ +M GGDLK + P + A
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD 141
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 142 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + R LGKG FG V C+ TG++ A E + E++I
Sbjct: 13 RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 67
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEFLPYGSLREYLQKH--KERIDHIKLLQYTS 124
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 183
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 63 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 122
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 123 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 182
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 183 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 100 STKDIY--NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXG 157
S D+Y +E + + + M R LG+G FG V + A G +
Sbjct: 4 SAADVYVPDEWE-VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEA 60
Query: 158 ESM-----VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----M 208
SM L E ++++ N VV L +++ +M GDLK ++ + M
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 209 GGEPGF---DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAV 265
P +++ A E+ G+ +L+ V+RD N ++ + V+I D G+
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 266 EIPEGESVR-GRVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+I E + R G G V +M+PE + + +T D +SFG +++E+
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 114 KTFRMYRVLGKGGFGEVC-ACQVRATGKM-YACXXXXXXXXXXXXGESM-VLIEKQILQK 170
K + + LG+G FG+V A G+ Y E +L E +L++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHI---------------------YNMG 209
+N V+ L A L L++ G L+ + +
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 210 GEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE 269
E + +A ++ G+++L + LV+RD NIL+ + ++ISD GL+ ++ E
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 270 GESV----RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+S +GR+ V +MA E + + YT D +SFG L++E++ G P+
Sbjct: 203 EDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEK 165
+ + M R LG+G FG V + A G + SM L E
Sbjct: 7 VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 166 QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----MGGEPGF---DIAR 218
++++ N VV L +++ +M GDLK ++ + M P +++
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-GRV 277
A E+ G+ +L+ V+RD N ++ + V+I D G+ +I E + R G
Sbjct: 125 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 278 G--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +M+PE + + +T D +SFG +++E+
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 80/206 (38%), Gaps = 9/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K F R +G G FG V + ++ A ++ E + LQK+
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ Y + LV+ G + +IA A L GL +L
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA---LQGLAYL 131
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI---DN 290
H +++RD K NILL + G V++ D G A + VGT +MAPEVI D
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDE 188
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPF 316
+Y D +S G E+ E + P
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 40 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 99
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V ++L +M GGDLK + P + A
Sbjct: 100 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 159
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 160 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
RF S + K + LV + G LK ++ I R + ++L GL+ L
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRF---KVXKIKVLRSWCRQILKGLQFL 145
Query: 234 HYIG--LVYRDCKPENILLDD-YGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVIDN 290
H +++RD K +NI + G V+I DLGLA + + +GT + APE +
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYE- 203
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPF 316
EKY S D ++FG E + P+
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPY 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 106 NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM---VL 162
++++ + K + R LG G FGEV QV + E L
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 96
Query: 163 IEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF- 221
+E I+ K N + +V +++ +M GGDLK + P + A
Sbjct: 97 MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD 156
Query: 222 ---YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVR---ISDLGLAVEIPEGESVRG 275
A ++ CG ++L ++RD N LL G R I D G+A +I R
Sbjct: 157 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 276 ---RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ V +M PE +T D +SFG L++E+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 33/225 (14%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATG---KMYACXXXXXXXXXXXXGESMVLIE 164
+Q + + +GKG +GEV K+++ +++L
Sbjct: 2 MQRTVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRH 61
Query: 165 KQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
IL F+ S + + L L+ G L + EP A A
Sbjct: 62 DNILG-----FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL----ALRLAV 112
Query: 225 EVLCGLEHLHY--------IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV--- 273
CGL HLH + +RD K N+L+ I+DLGLAV +G
Sbjct: 113 SAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDI 172
Query: 274 --RGRVGTVGYMAPEVIDN-------EKYTYSPDWFSFGCLIFEM 309
RVGT YMAPEV+D E Y ++ W +FG +++E+
Sbjct: 173 GNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIW-AFGLVLWEI 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ ++ + LG G FGEV + K+ L E +++
Sbjct: 9 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKV-----AVKTLKPGTMSVQAFLEEANLMKT 63
Query: 171 INSRFVVSLAYAYETKDALCLVLT--IMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLC 228
+ +V L YA TK+ ++T + G L F + GG+ + + ++A++
Sbjct: 64 LQHDKLVRL-YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGK--VLLPKLIDFSAQIAE 120
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPE 286
G+ ++ ++RD + N+L+ + +I+D GLA I + E + G + + APE
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
Query: 287 VIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRR 319
I+ +T + +SFG L++E++ G+ P+ R
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGR 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 109 QPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQIL 168
Q + + + +LG+G V + + TG ++A M E ++L
Sbjct: 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR--EFEVL 61
Query: 169 QKINSRFVVSLAYAYE---TKDALCLVLTIMNGGDLKFHIYNMGGEP--GFDIARARFYA 223
+K+N + +V L +A E T L++ G L Y + EP + + + F
Sbjct: 62 KKLNHKNIVKL-FAIEEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEFLI 116
Query: 224 A--EVLCGLEHLHYIGLVYRDCKPENILL----DDYGHVRISDLGLAVEIPEGESVRGRV 277
+V+ G+ HL G+V+R+ KP NI+ D +++D G A E+ + E
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY 176
Query: 278 GTVGYMAPEVID--------NEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
GT Y+ P++ + +KY + D +S G + G PFR
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 114 KTFRMYRVLGKGGFGEVC-ACQVRATGKM-YACXXXXXXXXXXXXGESM-VLIEKQILQK 170
K + + LG+G FG+V A G+ Y E +L E +L++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHI---------------------YNMG 209
+N V+ L A L L++ G L+ + +
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 210 GEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE 269
E + +A ++ G+++L + LV+RD NIL+ + ++ISD GL+ ++ E
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 270 GESV----RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+S +GR+ V +MA E + + YT D +SFG L++E++ G P+
Sbjct: 203 EDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 209 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFXRRLKE 262
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ ++ + LG G FGEV K+ L E +++
Sbjct: 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-----EAFLAEANVMKT 239
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+ +V L +A TK+ + ++ M G L + + G + + ++A++ G+
Sbjct: 240 LQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGM 297
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SVRGRVGTVGYMAPEVI 288
+ ++RD + NIL+ +I+D GLA I + E + G + + APE I
Sbjct: 298 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 357
Query: 289 DNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +T D +SFG L+ E++ G+ P+
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + +RI+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 80/206 (38%), Gaps = 9/206 (4%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
K F R +G G FG V + ++ A ++ E + LQK+
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
+ Y + LV+ G + +IA A L GL +L
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA---LQGLAYL 170
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVGYMAPEVI---DN 290
H +++RD K NILL + G V++ D G A + VGT +MAPEVI D
Sbjct: 171 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDE 227
Query: 291 EKYTYSPDWFSFGCLIFEMIEGQAPF 316
+Y D +S G E+ E + P
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 114 KTFRMYRVLGKGGFGEVC-ACQVRATGKM-YACXXXXXXXXXXXXGESM-VLIEKQILQK 170
K + + LG+G FG+V A G+ Y E +L E +L++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHI---------------------YNMG 209
+N V+ L A L L++ G L+ + +
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 210 GEPGFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE 269
E + +A ++ G+++L + LV+RD NIL+ + ++ISD GL+ ++ E
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 270 GES----VRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+S +GR+ V +MA E + + YT D +SFG L++E++ G P+
Sbjct: 203 EDSYVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 173 SRF-VVSLAYAYETKDALCLVLT-IMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A +V+T G+L ++ Y + E + +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 200 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 254
Query: 332 VKE 334
+KE
Sbjct: 255 LKE 257
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 173 SRF-VVSLAYA-YETKDALCLVLTIMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A + L +++ G+L ++ Y + E + +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 209 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 263
Query: 332 VKE 334
+KE
Sbjct: 264 LKE 266
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 173 SRF-VVSLAYA-YETKDALCLVLTIMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A + L +++ G+L ++ Y + E + +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 209 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 263
Query: 332 VKE 334
+KE
Sbjct: 264 LKE 266
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQKINSRFVVS 178
+++G G GEVC ++R G+ + L E I+ + + ++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 179 LAYAYETKDALCLVLT-IMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
L T+ L +++T M G L + G+ F I + V G+ +L +G
Sbjct: 115 LE-GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGRVGTVGYMAPEVIDNEKY 293
V+RD N+L+D ++SD GL+ + + + G + + APE I +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 294 TYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + D +SFG +++E++ G+ P+ M RD +
Sbjct: 232 SSASDVWSFGVVMWEVLAYGERPY---WNMTNRDVI 264
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 100 STKDIY--NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXG 157
S D+Y +E + + + M R LG+G FG V + A G +
Sbjct: 10 SAADVYVPDEWE-VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEA 66
Query: 158 ESM-----VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----M 208
SM L E ++++ N VV L +++ +M GDLK ++ + M
Sbjct: 67 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAM 126
Query: 209 GGEPGF---DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAV 265
P +++ A E+ G+ +L+ V+RD N ++ + V+I D G+
Sbjct: 127 ANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 266 EIPEGESVR-GRVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+I E + R G G V +M+PE + + +T D +SFG +++E+
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRA-TGKMYACXXXXXXXXXXXXGESM--VLIEKQI 167
I K R+ LG G FG V + A +GK + E+M + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++ R ++ L Y + +V + G L + G F + YA +V
Sbjct: 69 MHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVA 125
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES----VRGRVGTVGYM 283
G+ +L ++RD N+LL V+I D GL +P+ + R +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
APE + ++++ D + FG ++EM GQ P+
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMV--LIEKQILQKINSRFVV 177
+V+G G FGEV ++ + + V L E I+ + + ++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 178 SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
L + ++ M G L + GE F + + + G+++L +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYLANMN 167
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRGRVGTVGYMAPEVIDNEKY 293
V+RD NIL++ ++SD GL+ + PE + G + + APE I K+
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 294 TYSPDWFSFGCLIFE-MIEGQAPF 316
T + D +SFG +++E M G+ P+
Sbjct: 228 TSASDVWSFGIVMWEVMTYGERPY 251
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 199 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 143 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 202
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 203 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRA-TGKMYACXXXXXXXXXXXXGESM--VLIEKQI 167
I K R+ LG G FG V + A +GK + E+M + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++ R ++ L Y + +V + G L + G F + YA +V
Sbjct: 65 MHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVA 121
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES----VRGRVGTVGYM 283
G+ +L ++RD N+LL V+I D GL +P+ + R +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
APE + ++++ D + FG ++EM GQ P+
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 147 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 207 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 173 SRF-VVSLAYAYETKDALCLVLT-IMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A +V+T G+L ++ Y + E + +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 200 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 254
Query: 332 VKE 334
+KE
Sbjct: 255 LKE 257
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRA-TGKMYACXXXXXXXXXXXXGESM--VLIEKQI 167
I K R+ LG G FG V + A +GK + E+M + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++ R ++ L Y + +V + G L + G F + YA +V
Sbjct: 65 MHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVA 121
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES----VRGRVGTVGYM 283
G+ +L ++RD N+LL V+I D GL +P+ + R +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
APE + ++++ D + FG ++EM GQ P+
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEK 165
+ + M R LG+G FG V + A G + SM L E
Sbjct: 12 VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 166 QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----MGGEPGF---DIAR 218
++++ N VV L +++ +M GDLK ++ + M P +++
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-GRV 277
A E+ G+ +L+ V+RD N ++ + V+I D G+ +I E + R G
Sbjct: 130 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 278 G--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +M+PE + + +T D +SFG +++E+
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 173 SRF-VVSLAYA-YETKDALCLVLTIMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A + L +++ G+L ++ Y + E + +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 200 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 254
Query: 332 VKE 334
+KE
Sbjct: 255 LKE 257
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 173 SRF-VVSLAYAYETKDALCLVLT-IMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A +V+T G+L ++ Y + E + +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 200 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 254
Query: 332 VKE 334
+KE
Sbjct: 255 LKE 257
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 214 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 214 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 146 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 206 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 13/216 (6%)
Query: 120 RVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-VLIEKQILQKINSRFVVS 178
+++G G GEVC ++R G+ + L E I+ + + ++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 179 LAYAYETKDALCLVLT-IMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
L T+ L +++T M G L + G+ F I + V G+ +L +G
Sbjct: 115 LE-GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGE-SVRGRVGTVGYMAPEVIDNEKY 293
V+RD N+L+D ++SD GL+ + P+ + G + + APE I +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 294 TYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRDEV 328
+ + D +SFG +++E++ G+ P+ M RD +
Sbjct: 232 SSASDVWSFGVVMWEVLAYGERPY---WNMTNRDVI 264
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 214 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 173 SRF-VVSLAYA-YETKDALCLVLTIMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A + L +++ G+L ++ Y + E + +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 209 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 263
Query: 332 VKE 334
+KE
Sbjct: 264 LKE 266
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTX 166
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 167 XKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 223 GRI-ENGER 230
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRA-TGKMYACXXXXXXXXXXXXGESM--VLIEKQI 167
I K R+ LG G FG V + A +GK + E+M + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++ R ++ L Y + +V + G L + G F + YA +V
Sbjct: 69 MHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVA 125
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES----VRGRVGTVGYM 283
G+ +L ++RD N+LL V+I D GL +P+ + R +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
APE + ++++ D + FG ++EM GQ P+
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRA-TGKMYACXXXXXXXXXXXXGESM--VLIEKQI 167
I K R+ LG G FG V + A +GK + E+M + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++ R ++ L Y + +V + G L + G F + YA +V
Sbjct: 75 MHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVA 131
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES----VRGRVGTVGYM 283
G+ +L ++RD N+LL V+I D GL +P+ + R +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
APE + ++++ D + FG ++EM GQ P+
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 32/244 (13%)
Query: 96 NRRLSTKDIYNEIQP---------------ITYKTFRMYRVLGKGGFGEVCACQVRATGK 140
N RL +Y + P + + M R LG+G FG V + A G
Sbjct: 14 NSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVY--EGVAKGV 71
Query: 141 MYACXXXXXXXXXXXXGESM-----VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTI 195
+ SM L E ++++ N VV L +++ +
Sbjct: 72 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 131
Query: 196 MNGGDLKFHIYN----MGGEPGF---DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENI 248
M GDLK ++ + M P +++ A E+ G+ +L+ V+RD N
Sbjct: 132 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 191
Query: 249 LLDDYGHVRISDLGLAVEIPEGESVR-GRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCL 305
++ + V+I D G+ +I E + R G G V +M+PE + + +T D +SFG +
Sbjct: 192 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 251
Query: 306 IFEM 309
++E+
Sbjct: 252 LWEI 255
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRA-TGKMYACXXXXXXXXXXXXGESM--VLIEKQI 167
I K R+ LG G FG V + A +GK + E+M + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++ R ++ L Y + +V + G L + G F + YA +V
Sbjct: 75 MHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVA 131
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES----VRGRVGTVGYM 283
G+ +L ++RD N+LL V+I D GL +P+ + R +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
APE + ++++ D + FG ++EM GQ P+
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRA-TGKMYACXXXXXXXXXXXXGESM--VLIEKQI 167
I K R+ LG G FG V + A +GK + E+M + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 168 LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
+ ++ R ++ L Y + +V + G L + G F + YA +V
Sbjct: 65 MHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVA 121
Query: 228 CGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES----VRGRVGTVGYM 283
G+ +L ++RD N+LL V+I D GL +P+ + R +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 284 APEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
APE + ++++ D + FG ++EM GQ P+
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRG 275
+A A Y E+L L +LH IGLVY D KPENI+L + +++ DLG I S
Sbjct: 181 VAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI---NSFGY 236
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFG 303
GT G+ APE++ T + D ++ G
Sbjct: 237 LYGTPGFQAPEIVRTGP-TVATDIYTVG 263
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 93/227 (40%), Gaps = 37/227 (16%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI 167
+Q K +M + +GKG +GEV + R G+ A E+ E +I
Sbjct: 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE------EASWFRETEI 82
Query: 168 LQKINSR------FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARF 221
Q + R F+ + + L L+ G L Y+ D
Sbjct: 83 YQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLK 138
Query: 222 YAAEVLCGLEHLHY--------IGLVYRDCKPENILLDDYGHVRISDLGLAVE-IPEGES 272
A + GL HLH + +RD K +NIL+ G I+DLGLAV+ I +
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE 198
Query: 273 V----RGRVGTVGYMAPEVID---NEKYTYS---PDWFSFGCLIFEM 309
V RVGT YM PEV+D N + S D +SFG +++E+
Sbjct: 199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +++ K++ +V L + +CLV M G L ++ G +A
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----------LFA 101
Query: 224 AEVLCGL-----EHLHYI---GLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SV 273
AE L G+ E + Y+ +++RD N L+ + +++SD G+ + + + S
Sbjct: 102 AETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPFRRR 319
G V + +PEV +Y+ D +SFG L++E+ EG+ P+ R
Sbjct: 162 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 213 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKE 266
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ + + V+G+G FG+V +++ G E ++L K
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 71
Query: 171 INSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN---MGGEPGFDIARAR------ 220
+ +++L A E + L L + G+L + + +P F IA +
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 221 ----FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV--- 273
+AA+V G+++L ++RD NIL+ + +I+D GL+ G+ V
Sbjct: 132 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 187
Query: 274 --RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
GR+ V +MA E ++ YT + D +S+G L++E++ G P+
Sbjct: 188 KTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 116 FRMYRVLGKGGFGEVC---ACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKIN 172
+ + LG+G FG+V A + T ++ E +IL I
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 173 SRF-VVSLAYA-YETKDALCLVLTIMNGGDLKFHIYNMGGE--PGFDIARARFYAAEVLC 228
VV+L A + L +++ G+L ++ + E P D+ + ++C
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 229 -------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 209 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKE 262
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 99 LSTKDIY--NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXX 156
+S D+Y +E + + + M R LG+G FG V + A G +
Sbjct: 2 VSAADVYVPDEWE-VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNE 58
Query: 157 GESM-----VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN---- 207
SM L E ++++ N VV L +++ +M GDLK ++ +
Sbjct: 59 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 208 MGGEPGF---DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA 264
M P +++ A E+ G+ +L+ V+RD N ++ + V+I D G+
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 265 VEIPEGESVR-GRVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+I E + R G G V +M+PE + + +T D +SFG +++E+
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K + S ++ E ++++ I
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI-----------YNMGGEPGFDIARARFY 222
+ +++L A L +++ + G+L+ ++ YN P ++
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 223 --AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 254
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 255 L-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 100 STKDIY--NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXG 157
S D+Y +E + + + M R LG+G FG V + A G +
Sbjct: 10 SAADVYVPDEWE-VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEA 66
Query: 158 ESM-----VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----M 208
SM L E ++++ N VV L +++ +M GDLK ++ + M
Sbjct: 67 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 126
Query: 209 GGEPGF---DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAV 265
P +++ A E+ G+ +L+ V+RD N ++ + V+I D G+
Sbjct: 127 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 266 EIPEGESVR-GRVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+I E + R G G V +M+PE + + +T D +SFG +++E+
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ + + V+G+G FG+V +++ G E ++L K
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 81
Query: 171 INSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN---MGGEPGFDIARAR------ 220
+ +++L A E + L L + G+L + + +P F IA +
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 221 ----FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV--- 273
+AA+V G+++L ++RD NIL+ + +I+D GL+ G+ V
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 197
Query: 274 --RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
GR+ V +MA E ++ YT + D +S+G L++E++ G P+
Sbjct: 198 KTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 99 LSTKDIY--NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXX 156
+S D+Y +E + + + M R LG+G FG V + A G +
Sbjct: 2 VSAADVYVPDEWE-VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNE 58
Query: 157 GESM-----VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN---- 207
SM L E ++++ N VV L +++ +M GDLK ++ +
Sbjct: 59 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 208 MGGEPGF---DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA 264
M P +++ A E+ G+ +L+ V+RD N ++ + V+I D G+
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 265 VEIPEGESVR-GRVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+I E + R G G V +M+PE + + +T D +SFG +++E+
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 213 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKE 266
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 30/266 (11%)
Query: 75 QYHKYNVFLDSIENYELE----MDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEV 130
Q KY V IE+YE +D T+ YNE + + LG G FG+V
Sbjct: 8 QKPKYQVRWKIIESYEGNSYTFID-----PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV 62
Query: 131 CACQVRATGKMYACXXXXXXXXXXXXG---ESMVLIEKQILQKINSR-FVVSLAYAYETK 186
GK A + ++ E +I+ + +V+L A
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 187 DALCLVLTIMNGGDLKFHIYN----MGGEPGFDIARARF-------YAAEVLCGLEHLHY 235
+ ++ GDL + + +P F IA + ++++V G+ L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS 182
Query: 236 IGLVYRDCKPENILLDDYGHV-RISDLGLAVEIPEGES--VRGRVGT-VGYMAPEVIDNE 291
++RD N+LL + GHV +I D GLA +I + V+G V +MAPE I +
Sbjct: 183 KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 241
Query: 292 KYTYSPDWFSFGCLIFEMIE-GQAPF 316
YT D +S+G L++E+ G P+
Sbjct: 242 VYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 125
Query: 173 SRF-VVSLAYA-YETKDALCLVLTIMNGGDLKFHI---------YNMGGEPGFD----IA 217
VV+L A + L +++ G+L ++ Y + E + +
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 186 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 246 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 300
Query: 332 VKE 334
+KE
Sbjct: 301 LKE 303
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 132
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 133 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 191 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 132
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 133 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 191 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEK 165
+ + M R LG+G FG V + A G + SM L E
Sbjct: 13 VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 70
Query: 166 QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----MGGEPGF---DIAR 218
++++ N VV L +++ +M GDLK ++ + M P +++
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-GRV 277
A E+ G+ +L+ V+RD N ++ + V+I D G+ +I E + R G
Sbjct: 131 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 278 G--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +M+PE + + +T D +SFG +++E+
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK---MYACXXXXXXXXXXXXGESM--VLIEKQILQKINS- 173
+ LG+G FG+V + K A E + ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 120 RVLGKGGFGEVCACQ-VRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVS 178
RV+GKG FG V + + C L E +++ +N V++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 179 LAYAYETKDALC-LVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIG 237
L + L ++L M GDL I + P + + +V G+E+L
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP--TVKDLISFGLQVARGMEYLAEQK 144
Query: 238 LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SV---RGRVGTVGYMAPEVIDNEK 292
V+RD N +LD+ V+++D GLA +I + E SV R V + A E + +
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 293 YTYSPDWFSFGCLIFEMI-EGQAPFR 317
+T D +SFG L++E++ G P+R
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAPPYR 230
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 223 AAEVLCGLEHLHY-IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG 281
A ++ LEHLH + +++RD KP N+L++ G V+ D G++ + + + G
Sbjct: 142 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP 201
Query: 282 YMAPEVID---NEK-YTYSPDWFSFGCLIFEMI-------EGQAPFRRRKEMVKRDEVDR 330
Y APE I+ N+K Y+ D +S G E+ PF++ K++V+ +
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE----EP 257
Query: 331 RVKEDAEKYSCRFSD 345
+ A+K+S F D
Sbjct: 258 SPQLPADKFSAEFVD 272
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 57/238 (23%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRF 175
+ + ++G G +G VC + ++ A + +L E IL ++N
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKR-ILREIAILNRLNHDH 113
Query: 176 VVS-----LAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEV---- 226
VV + E D L +VL I + D K + R Y E+
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADS-DFK------------KLFRTPVYLTELHIKT 160
Query: 227 -----LCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA--VEIPEG--------- 270
L G++++H G+++RD KP N L++ V++ D GLA V+ PE
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 271 -----------------ESVRGRVGTVGYMAPEVI-DNEKYTYSPDWFSFGCLIFEMI 310
+ G V T Y APE+I E YT + D +S GC+ E++
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQI--LQKINS 173
+ R LG+G FG+V C+ G G + ++K+I L+ +
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 70
Query: 174 RFVVSLAY--AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLE 231
+V + + + L++ + G LK ++ + ++ + YA ++ G++
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMD 128
Query: 232 HLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI---PEGESVR-GRVGTVGYMAPEV 287
+L V+RD N+L++ V+I D GL I E +V+ R V + APE
Sbjct: 129 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 288 IDNEKYTYSPDWFSFGCLIFEMI 310
+ K+ + D +SFG + E++
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELL 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 63
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 120
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 179
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 218 RARFYAAEVL------C-GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
R RF ++L C +E+L ++RD N L++D G V++SD GL+ + +
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
Query: 271 E--SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR 318
E S RG V + PEV+ K++ D ++FG L++E+ G+ P+ R
Sbjct: 159 EYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 100 STKDIY--NEIQPITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXG 157
S D+Y +E + + + M R LG+G FG V + A G +
Sbjct: 4 SAADVYVPDEWE-VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEA 60
Query: 158 ESM-----VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----M 208
SM L E ++++ N VV L +++ +M GDLK ++ + M
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 209 GGEPGF---DIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAV 265
P +++ A E+ G+ +L+ V+RD N ++ + V+I D G+
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 266 EIPEGESVR-GRVG--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+I E + R G G V +M+PE + + +T D +SFG +++E+
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 201 LKFHIYNMGGEPGFDIARARFYAA--EVLCGLEHLHYIGLVYRDCKPENILL----DDYG 254
+KFH + + + R + ++L G+ +LH +++RD KP NIL+ + G
Sbjct: 110 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 169
Query: 255 HVRISDLGLA----VEIPEGESVRGRVGTVGYMAPEVIDNEK-YTYSPDWFSFGCLIFEM 309
V+I+D+G A + + V T Y APE++ + YT + D ++ GC+ E+
Sbjct: 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
Query: 310 IEGQAPFRRRKEMVK------RDEVDR 330
+ + F R+E +K D++DR
Sbjct: 230 LTSEPIFHCRQEDIKTSNPYHHDQLDR 256
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
I ++ ++ + LG G FGEV K+ L E +++
Sbjct: 179 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-----EAFLAEANVMKT 233
Query: 171 INSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGL 230
+ +V L +A TK+ + ++ M G L + + G + + ++A++ G+
Sbjct: 234 LQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGM 291
Query: 231 EHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGT---VGYMAPEV 287
+ ++RD + NIL+ +I+D GLA RVG + + APE
Sbjct: 292 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLA-----------RVGAKFPIKWTAPEA 340
Query: 288 IDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
I+ +T D +SFG L+ E++ G+ P+
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 55 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 112
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 113 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 171 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +++ K++ +V L + +CLV M G L ++ G +A
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----------LFA 101
Query: 224 AEVLCGL-----EHLHYIG---LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SV 273
AE L G+ E + Y+ +++RD N L+ + +++SD G+ + + + S
Sbjct: 102 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPFRRR 319
G V + +PEV +Y+ D +SFG L++E+ EG+ P+ R
Sbjct: 162 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGES---MVLIEKQILQKIN 172
++ + LG+G FG+V K C S ++ E +IL I
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 90
Query: 173 SRF-VVSLAYA-YETKDALCLVLTIMNGGDLKFHIYNMGGE--PGFDIARARF------- 221
VV+L A + L +++ G+L ++ + E P + +
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 222 ----YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR-- 274
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR
Sbjct: 151 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 275 -GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRR 331
R+ + +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR
Sbjct: 211 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRR 265
Query: 332 VKE 334
+KE
Sbjct: 266 LKE 268
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +++ K++ +V L + +CLV M G L ++ G +A
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----------LFA 99
Query: 224 AEVLCGL-----EHLHYIG---LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SV 273
AE L G+ E + Y+ +++RD N L+ + +++SD G+ + + + S
Sbjct: 100 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPFRRR 319
G V + +PEV +Y+ D +SFG L++E+ EG+ P+ R
Sbjct: 160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 206
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 69
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 126
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 185
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 73 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 130
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 131 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 189 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 233
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 68
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 125
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 184
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 116
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 117 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 175 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I + GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 67
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 124
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 183
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ +++L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 62
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 119
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 178
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEK 165
+ + M R LG+G FG V + A G + SM L E
Sbjct: 9 VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 166 QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----MGGEPGF---DIAR 218
++++ N VV L +++ +M GDLK ++ + M P +++
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-GRV 277
A E+ G+ +L+ V+RD N ++ + V+I D G+ +I E + R G
Sbjct: 127 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 278 G--TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +M+PE + + +T D +SFG +++E+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 53 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 110
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 111 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 168
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 169 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 216 IARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES--- 272
+AR Y E + GL+ H + +RD K +N+LL + I+D GLA++ G+S
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD 189
Query: 273 VRGRVGTVGYMAPEVIDN-----EKYTYSPDWFSFGCLIFEM 309
G+VGT YMAPEV++ D ++ G +++E+
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 70
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 127
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 186
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 116
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 117 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 175 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 136 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 195
Query: 274 RGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVDR 330
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 196 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVIG 251
Query: 331 RVKEDAEK 338
R+ E+ E+
Sbjct: 252 RI-ENGER 258
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G +G V C+ R TG++ A + + L E ++L+++ +V+L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVI-KKIALREIRMLKQLKHPNLVNLLE 69
Query: 182 AYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYIGLVYR 241
+ K L LV + L G P + + + L + H ++R
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW---QTLQAVNFCHKHNCIHR 126
Query: 242 DCKPENILLDDYGHVRISDLGLAVEIPEGES--VRGRVGTVGYMAPE-VIDNEKYTYSPD 298
D KPENIL+ + +++ D G A + G S V T Y +PE ++ + +Y D
Sbjct: 127 DVKPENILITKHSVIKLCDFGFA-RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 299 WFSFGCLIFEMIEG 312
++ GC+ E++ G
Sbjct: 186 VWAIGCVFAELLSG 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +++ K++ +V L + +CLV M G L ++ G +A
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----------LFA 104
Query: 224 AEVLCGL-----EHLHYIG---LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SV 273
AE L G+ E + Y+ +++RD N L+ + +++SD G+ + + + S
Sbjct: 105 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPFRRR 319
G V + +PEV +Y+ D +SFG L++E+ EG+ P+ R
Sbjct: 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 64
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 121
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 180
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 65 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL- 122
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 123 --VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 181 K-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 95
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 152
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 211
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 64
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 121
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 180
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 67
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ D + Y +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTS 124
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 183
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGRVGTVGYMA 284
G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR+ V +MA
Sbjct: 215 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMA 273
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
PE + + YT+ D +SFG L++E+ G +P+
Sbjct: 274 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 223 AAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGRVG 278
A +V G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR+
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL- 214
Query: 279 TVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 30/266 (11%)
Query: 75 QYHKYNVFLDSIENYELE----MDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEV 130
Q KY V IE+YE +D T+ YNE + + LG G FG+V
Sbjct: 8 QKPKYQVRWKIIESYEGNSYTFID-----PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV 62
Query: 131 CACQVRATGKMYACXXXXXXXXXXXXG---ESMVLIEKQILQKINSR-FVVSLAYAYETK 186
GK A + ++ E +I+ + +V+L A
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 187 DALCLVLTIMNGGDLKFHIYN----MGGEPGFDIARAR-------FYAAEVLCGLEHLHY 235
+ ++ GDL + + +P F IA + ++++V G+ L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182
Query: 236 IGLVYRDCKPENILLDDYGHV-RISDLGLAVEIPEGES--VRGRVGT-VGYMAPEVIDNE 291
++RD N+LL + GHV +I D GLA +I + V+G V +MAPE I +
Sbjct: 183 KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 241
Query: 292 KYTYSPDWFSFGCLIFEMIE-GQAPF 316
YT D +S+G L++E+ G P+
Sbjct: 242 VYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 223 GRI-ENGER 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 223 GRI-ENGER 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 71
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 128
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 129 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 187
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 113 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172
Query: 274 RGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVDR 330
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVIG 228
Query: 331 RVKEDAEK 338
R+ E+ E+
Sbjct: 229 RI-ENGER 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 417 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE-- 473
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 474 -LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 533 KW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGRVGTVGYMA 284
G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR+ V +MA
Sbjct: 156 GMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMA 214
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
PE + + YT+ D +SFG L++E+ G +P+
Sbjct: 215 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 161 VLIEKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR 220
+L E ++Q++++ ++V + E ++ LV+ + G L ++ +I
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE-- 474
Query: 221 FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES-----VRG 275
+V G+++L V+RD N+LL + +ISD GL+ + E+ G
Sbjct: 475 -LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 276 RVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRK 320
+ V + APE I+ K++ D +SFG L++E GQ P+R K
Sbjct: 534 KW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +++ K++ +V L + +CLV M G L ++ G +A
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG----------LFA 102
Query: 224 AEVLCGL-----EHLHYIG---LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SV 273
AE L G+ E + Y+ +++RD N L+ + +++SD G+ + + + S
Sbjct: 103 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPFRRR 319
G V + +PEV +Y+ D +SFG L++E+ EG+ P+ R
Sbjct: 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 164 EKQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYA 223
E +++ K++ +V L + +CLV M G L ++ G +A
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----------LFA 121
Query: 224 AEVLCGL-----EHLHYIG---LVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE--SV 273
AE L G+ E + Y+ +++RD N L+ + +++SD G+ + + + S
Sbjct: 122 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 181
Query: 274 RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMI-EGQAPFRRR 319
G V + +PEV +Y+ D +SFG L++E+ EG+ P+ R
Sbjct: 182 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 228
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 104 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 219
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 220 GRI-ENGER 227
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 120 RVLGKGGFGEVCACQVRATGK-----MYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ LG+G FG+V + K S ++ E ++++ I
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM---GGEPGFDIARA----RFYAAEV 226
+ ++ L A L +++ + G+L+ ++ G E +DI R + V
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 227 LC------GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGR 276
C G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ V +MAPE + + YT+ D +SFG L++E+ G +P+
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 214 FDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV 273
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 111 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 170
Query: 274 RGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVDR 330
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 171 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVIG 226
Query: 331 RVKEDAEK 338
R+ E+ E+
Sbjct: 227 RI-ENGER 233
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 256 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKE 309
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 258 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKE 311
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 109 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 168
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 169 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 224
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 225 GRI-ENGER 232
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGRVGTVGYMA 284
G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR+ V +MA
Sbjct: 161 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMA 219
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
PE + + YT+ D +SFG L++E+ G +P+
Sbjct: 220 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 263 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKE 316
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 82
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 139
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 198
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 166
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 223 GRI-ENGER 230
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI-PEGESVR---GRV 277
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + VR R+
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRRRKEMVKRD-EVDRRVKE 334
+ +MAPE I + YT D +SFG L++E+ G +P+ VK D E RR+KE
Sbjct: 265 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKE 318
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----GESVRGRVGTVGYMA 284
G+E+L ++RD N+L+ + ++I+D GLA +I ++ GR+ V +MA
Sbjct: 158 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMA 216
Query: 285 PEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
PE + + YT+ D +SFG L++E+ G +P+
Sbjct: 217 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FGEV + R TG+ A + L E +ILQ + VV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT-ALREIKILQLLKHENVVNLIE 84
Query: 182 AYETK--------DALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
TK ++ LV DL + N+ + F ++ + +L GL ++
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYI 141
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-----GRVGTVGYMAPEVI 288
H +++RD K N+L+ G ++++D GLA ++ + RV T+ Y PE++
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 289 DNEKYTYSP--DWFSFGCLIFEM 309
E+ Y P D + GC++ EM
Sbjct: 202 LGER-DYGPPIDLWGAGCIMAEM 223
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 64
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 121
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----------GESVR 274
++ G+E+L ++RD NIL+++ V+I D GL +P+ GES
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES-- 179
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ + APE + K++ + D +SFG +++E+
Sbjct: 180 ----PIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 602
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 603 GRI-ENGER 610
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 82
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 139
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGTVG--- 281
++ G+E+L ++RD NIL+++ V+I D GL +P+ + +V G
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX-KVKEPGESP 198
Query: 282 --YMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ APE + K++ + D +SFG +++E+
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESM-----VLIEK 165
+ + M R LG+G FG V + A G + SM L E
Sbjct: 9 VAREKITMSRELGQGSFGMVY--EGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 166 QILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN----MGGEPGF---DIAR 218
++++ N VV L +++ +M GDLK ++ + M P +++
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 219 ARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-GRV 277
A E+ G+ +L+ V+RD N + + V+I D G+ +I E + R G
Sbjct: 127 MIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 278 GT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
G V +M+PE + + +T D +SFG +++E+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 213 GFDIARARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES 272
D+A YA ++ L +L V+RD N+L+ V++ D GL+ + +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 546
Query: 273 VRGRVGT--VGYMAPEVIDNEKYTYSPDWFSFGCLIFE-MIEGQAPFRRRKEMVKRDEVD 329
+ G + +MAPE I+ ++T + D + FG ++E ++ G PF + VK ++V
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 602
Query: 330 RRVKEDAEK 338
R+ E+ E+
Sbjct: 603 GRI-ENGER 610
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FGEV + R TG+ A + L E +ILQ + VV+L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT-ALREIKILQLLKHENVVNLIE 83
Query: 182 AYETK--------DALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
TK ++ LV DL + N+ + F ++ + +L GL ++
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYI 140
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-----GRVGTVGYMAPEVI 288
H +++RD K N+L+ G ++++D GLA ++ + RV T+ Y PE++
Sbjct: 141 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
Query: 289 DNEKYTYSP--DWFSFGCLIFEM 309
E+ Y P D + GC++ EM
Sbjct: 201 LGER-DYGPPIDLWGAGCIMAEM 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L++ +M G L + H N+G + + + ++ G
Sbjct: 78 PHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLN------WCVQIAKG 130
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D GLA E E + G+V + +MA
Sbjct: 131 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMAL 189
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 89/228 (39%), Gaps = 36/228 (15%)
Query: 116 FRMYRVLGKGGFGEVCAC-QVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINS- 173
+ + LG+G FG+V C +A G+ A S E Q+L+ +N+
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS----EIQVLEHLNTT 71
Query: 174 ------RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVL 227
R V L + +E +C+V ++ F I G P F + R A ++
Sbjct: 72 DPNSTFRCVQMLEW-FEHHGHICIVFELLGLSTYDF-IKENGFLP-FRLDHIRKMAYQIC 128
Query: 228 CGLEHLHYIGLVYRDCKPENILL--DDYGH-----------------VRISDLGLAVEIP 268
+ LH L + D KPENIL DY +++ D G A
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 269 EGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
E S V T Y APEVI ++ D +S GC++ E G F
Sbjct: 189 EHHSTL--VSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 111 ITYKTFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQK 170
+ + + V+G+G FG+V +++ G E ++L K
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 78
Query: 171 INSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN---MGGEPGFDIARAR------ 220
+ +++L A E + L L + G+L + + +P F IA +
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 221 ----FYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV--- 273
+AA+V G+++L ++R+ NIL+ + +I+D GL+ G+ V
Sbjct: 139 QQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS----RGQEVYVK 194
Query: 274 --RGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
GR+ V +MA E ++ YT + D +S+G L++E++ G P+
Sbjct: 195 KTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 218 RARFYAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHV-RISDLGLAVEIPEGESVRGR 276
AR + ++L GL+++H +++RD KP N+ ++ V +I D GLA + S +G
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 277 VG----TVGYMAPE-VIDNEKYTYSPDWFSFGCLIFEMIEGQAPFRRRKEM 322
+ T Y +P ++ YT + D ++ GC+ EM+ G+ F E+
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSL-- 179
+G+G FGEV + R TG+ A + L E +ILQ + VV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT-ALREIKILQLLKHENVVNLIE 84
Query: 180 -----AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLH 234
A Y A ++ DL + N+ + F ++ + +L GL ++H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIH 142
Query: 235 YIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-----GRVGTVGYMAPEVID 289
+++RD K N+L+ G ++++D GLA ++ + RV T+ Y PE++
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL 202
Query: 290 NEKYTYSP--DWFSFGCLIFEM 309
E+ Y P D + GC++ EM
Sbjct: 203 GER-DYGPPIDLWGAGCIMAEM 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFVVSLAY 181
+G+G FGEV + R TG+ A + L E +ILQ + VV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT-ALREIKILQLLKHENVVNLIE 84
Query: 182 AYETK--------DALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHL 233
TK ++ LV DL + N+ + F ++ + +L GL ++
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYI 141
Query: 234 HYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR-----GRVGTVGYMAPEVI 288
H +++RD K N+L+ G ++++D GLA ++ + RV T+ Y PE++
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 289 DNEKYTYSP--DWFSFGCLIFEM 309
E+ Y P D + GC++ EM
Sbjct: 202 LGER-DYGPPIDLWGAGCIMAEM 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGES--VRGRVGT 279
+A +V G+E L + V+RD N+L+ V+I D GLA +I + VRG
Sbjct: 177 FAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL 236
Query: 280 -VGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
V +MAPE + YT D +S+G L++E+ G P+
Sbjct: 237 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 106/263 (40%), Gaps = 28/263 (10%)
Query: 75 QYHKYNVFLDSIENYELE----MDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEV 130
Q KY V IE+YE +D T+ YNE + + LG G FG+V
Sbjct: 8 QKPKYQVRWKIIESYEGNSYTFID-----PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKV 62
Query: 131 CACQVRATGKMYACXXXXXXXXXXXXG---ESMVLIEKQILQKINSR-FVVSLAYAYETK 186
GK A + ++ E +I+ + +V+L A
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 187 DALCLVLTIMNGGDLKFHIYNMGGEPGFDIARAR--------FYAAEVLCGLEHLHYIGL 238
+ ++ GDL + E D R ++++V G+ L
Sbjct: 123 GPVLVITEYCCYGDL-LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC 181
Query: 239 VYRDCKPENILLDDYGHV-RISDLGLAVEIPEGES--VRGRVGT-VGYMAPEVIDNEKYT 294
++RD N+LL + GHV +I D GLA +I + V+G V +MAPE I + YT
Sbjct: 182 IHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 240
Query: 295 YSPDWFSFGCLIFEMIE-GQAPF 316
D +S+G L++E+ G P+
Sbjct: 241 VQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE----SVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA + EG+ + G
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGK 180
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I K+T+ D +S+G I+E++ G P+
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L+ +M G L + H N+G + + + ++ G
Sbjct: 77 PHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLN------WCVQIAKG 129
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D GLA E E + G+V + +MA
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMAL 188
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L++ +M G L + H N+G + + + ++ G
Sbjct: 78 PHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN------WCVQIAKG 130
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D GLA E E + G+V + +MA
Sbjct: 131 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMAL 189
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 114 KTFRMYRVLGKGGFGEVCACQVRA----TGKMYACXXXXXXXXXXXXGESMVLIEKQI-- 167
+ + + LGKG FG V C+ TG++ A E + E++I
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-----EHLRDFEREIEI 65
Query: 168 ---LQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
LQ N + Y+ ++ L L++ + G L+ ++ + D + Y +
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTS 122
Query: 225 EVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPE----------GESVR 274
++ G+E+L ++R+ NIL+++ V+I D GL +P+ GES
Sbjct: 123 QICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES-- 180
Query: 275 GRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEM 309
+ + APE + K++ + D +SFG +++E+
Sbjct: 181 ----PIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 28/260 (10%)
Query: 78 KYNVFLDSIENYELE----MDENRRLSTKDIYNEIQPITYKTFRMYRVLGKGGFGEVCAC 133
KY V IE+YE +D T+ YNE + + LG G FG+V
Sbjct: 3 KYQVRWKIIESYEGNSYTFID-----PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEA 57
Query: 134 QVRATGKMYACXXXXXXXXXXXXG---ESMVLIEKQILQKINSR-FVVSLAYAYETKDAL 189
GK A + ++ E +I+ + +V+L A +
Sbjct: 58 TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 117
Query: 190 CLVLTIMNGGDLKFHIYNMGGEPGFDIARAR--------FYAAEVLCGLEHLHYIGLVYR 241
++ GDL + E D R ++++V G+ L ++R
Sbjct: 118 LVITEYCCYGDL-LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 176
Query: 242 DCKPENILLDDYGHV-RISDLGLAVEIPEGES--VRGRVGT-VGYMAPEVIDNEKYTYSP 297
D N+LL + GHV +I D GLA +I + V+G V +MAPE I + YT
Sbjct: 177 DVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 235
Query: 298 DWFSFGCLIFEMIE-GQAPF 316
D +S+G L++E+ G P+
Sbjct: 236 DVWSYGILLWEIFSLGLNPY 255
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L++ +M G L + H N+G + + + ++ G
Sbjct: 77 PHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN------WCVQIAKG 129
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D GLA E E + G+V + +MA
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMAL 188
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L++ +M G L + H N+G + + + ++ G
Sbjct: 81 PHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN------WCVQIAKG 133
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D GLA E E + G+V + +MA
Sbjct: 134 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMAL 192
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Query: 118 MYRVLGKGGFGEVC-ACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFV 176
+ R+LG+G FGEV G+ + + E I++ ++ +
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
V L E ++ +++ + G+L ++ + + Y+ ++ + +L I
Sbjct: 72 VKLIGIIE-EEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG--TVGYMAPEVIDNEKYT 294
V+RD NIL+ V++ D GL+ I + + + V + +M+PE I+ ++T
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 295 YSPDWFSFGCLIFEMIE-GQAPF 316
+ D + F ++E++ G+ PF
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPF 211
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 213 GFDIARARFYAAEVLCGLEHLHY-IGLVYRDCKPENILLD------DYGHVRISDLGLAV 265
G + + + ++L GL+++H G+++ D KPEN+L++ + ++I+DLG A
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 266 EIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
E + T Y +PEV+ + D +S CLIFE+I G F
Sbjct: 187 WY--DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 213 GFDIARARFYAAEVLCGLEHLHY-IGLVYRDCKPENILLD------DYGHVRISDLGLAV 265
G + + + ++L GL+++H G+++ D KPEN+L++ + ++I+DLG A
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 266 EIPEGESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPF 316
E + T Y +PEV+ + D +S CLIFE+I G F
Sbjct: 187 WY--DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGE----SVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA + EG+ + G
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGK 203
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I K+T+ D +S+G I+E++ G P+
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 218 RARFYAAEVL------C-GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
R RF ++L C +E+L ++RD N L++D G V++SD GL+ + +
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
Query: 271 E--SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR 318
E S G V + PEV+ K++ D ++FG L++E+ G+ P+ R
Sbjct: 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 204
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVGT-- 279
Y+ +V G+E L ++RD NILL + V+I D GLA +I + + T
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 280 -VGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MAPE I ++ Y+ D +S+G L++E+ G +P+
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 218 RARFYAAEVL------C-GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
R RF ++L C +E+L ++RD N L++D G V++SD GL+ + +
Sbjct: 98 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 157
Query: 271 E--SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR 318
E S G V + PEV+ K++ D ++FG L++E+ G+ P+ R
Sbjct: 158 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L++ +M G L + H N+G + + + ++ G
Sbjct: 79 PHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN------WCVQIAKG 131
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D GLA E E + G+V + +MA
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMAL 190
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L++ +M G L + H N+G + + + ++ G
Sbjct: 80 PHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN------WCVQIAKG 132
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D GLA E E + G+V + +MA
Sbjct: 133 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMAL 191
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 218 RARFYAAEVL------C-GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
R RF ++L C +E+L ++RD N L++D G V++SD GL+ + +
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
Query: 271 E--SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR 318
E S G V + PEV+ K++ D ++FG L++E+ G+ P+ R
Sbjct: 159 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTV 280
A++ G+E+L +V++D N+L+ D +V+ISDLGL E+ + + + +
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 211
Query: 281 GYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+MAPE I K++ D +S+G +++E+ G P+
Sbjct: 212 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 192 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Query: 118 MYRVLGKGGFGEVC-ACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFV 176
+ R+LG+G FGEV G+ + + E I++ ++ +
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
V L E ++ +++ + G+L ++ + + Y+ ++ + +L I
Sbjct: 88 VKLIGIIE-EEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG--TVGYMAPEVIDNEKYT 294
V+RD NIL+ V++ D GL+ I + + + V + +M+PE I+ ++T
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 295 YSPDWFSFGCLIFEMIE-GQAPF 316
+ D + F ++E++ G+ PF
Sbjct: 205 TASDVWMFAVCMWEILSFGKQPF 227
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 39/230 (16%)
Query: 115 TFRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR 174
+ + ++G+G +G V + K A + +L E IL ++ S
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKR-ILREITILNRLKSD 87
Query: 175 FVVSLAYAYETKD-----ALCLVLTIMNGGDLKFHIYNMGGEPGFDIAR-ARFYAAEVLC 228
+++ L +D L +VL I + DLK + P F + + +L
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADS-DLK----KLFKTPIFLTEQHVKTILYNLLL 142
Query: 229 GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEI--------------------- 267
G + +H G+++RD KP N LL+ V+I D GLA I
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 268 -PEGESVR----GRVGTVGYMAPEVI-DNEKYTYSPDWFSFGCLIFEMIE 311
P ++++ V T Y APE+I E YT S D +S GC+ E++
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 224 AEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVR---GRVGTV 280
A++ G+E+L +V++D N+L+ D +V+ISDLGL E+ + + + +
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 281 GYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+MAPE I K++ D +S+G +++E+ G P+
Sbjct: 195 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 218 RARFYAAEVL------C-GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
R RF ++L C +E+L ++RD N L++D G V++SD GL+ + +
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 271 E--SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR 318
E S G V + PEV+ K++ D ++FG L++E+ G+ P+ R
Sbjct: 174 EETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 218 RARFYAAEVL------C-GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
R RF ++L C +E+L ++RD N L++D G V++SD GL+ + +
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 271 E--SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR 318
E S G V + PEV+ K++ D ++FG L++E+ G+ P+ R
Sbjct: 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 32/221 (14%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI------NSRF 175
LG+G FG+V C A GK + E +L+KI N
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKEKDKENKFL 83
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V ++ + +C+ ++ +F + +P + + R A ++ L LH
Sbjct: 84 CVLMSDWFNFHGHMCIAFELLGKNTFEF-LKENNFQP-YPLPHVRHMAYQLCHALRFLHE 141
Query: 236 IGLVYRDCKPENILLDDY-------------------GHVRISDLGLAVEIPEGESVRGR 276
L + D KPENIL + +R++D G A E +
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI-- 199
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
V T Y PEVI + D +S GC++FE G F+
Sbjct: 200 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 218 RARFYAAEVL------C-GLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEG 270
R RF ++L C +E+L ++RD N L++D G V++SD GL+ + +
Sbjct: 105 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 164
Query: 271 E--SVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPFRR 318
E S G V + PEV+ K++ D ++FG L++E+ G+ P+ R
Sbjct: 165 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 176 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 84/227 (37%), Gaps = 32/227 (14%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSR- 174
+ + LG+G FG V C G + +E +L+KIN +
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRG---GARVALKIIKNVEKYKEAARLEINVLEKINEKD 91
Query: 175 -----FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCG 229
V + ++ +C+ ++ G F + I + R A ++
Sbjct: 92 PDNKNLCVQMFDWFDYHGHMCISFELL--GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 230 LEHLHYIGLVYRDCKPENILL--DDY-----------------GHVRISDLGLAVEIPEG 270
++ LH L + D KPENIL DY VR+ D G A E
Sbjct: 150 VKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEH 209
Query: 271 ESVRGRVGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
S V T Y APEVI ++ D +S GC+IFE G F+
Sbjct: 210 HSTI--VSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQ 254
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 216 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Query: 118 MYRVLGKGGFGEVC-ACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKINSRFV 176
+ R+LG+G FGEV G+ + + E I++ ++ +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 177 VSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHYI 236
V L E ++ +++ + G+L ++ + + Y+ ++ + +L I
Sbjct: 76 VKLIGIIE-EEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 237 GLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESVRGRVG--TVGYMAPEVIDNEKYT 294
V+RD NIL+ V++ D GL+ I + + + V + +M+PE I+ ++T
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 295 YSPDWFSFGCLIFEMIE-GQAPF 316
+ D + F ++E++ G+ PF
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPF 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 32/221 (14%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI------NSRF 175
LG+G FG+V C A GK + E +L+KI N
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKEKDKENKFL 92
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V ++ + +C+ ++ +F + +P + + R A ++ L LH
Sbjct: 93 CVLMSDWFNFHGHMCIAFELLGKNTFEF-LKENNFQP-YPLPHVRHMAYQLCHALRFLHE 150
Query: 236 IGLVYRDCKPENILLDDY-------------------GHVRISDLGLAVEIPEGESVRGR 276
L + D KPENIL + +R++D G A E +
Sbjct: 151 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI-- 208
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
V T Y PEVI + D +S GC++FE G F+
Sbjct: 209 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 249
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 207 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 188 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 222 YAAEVLCGLEHLHYIGLVYRDCKPENILLDDYGHVRISDLGLA----VEIPEGESVRGRV 277
+ ++ G+ +L LV+RD N+L+ HV+I+D GLA E E + G+V
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 278 GTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
+ +MA E I + YT+ D +S+G ++E++ G P+
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 32/221 (14%)
Query: 122 LGKGGFGEVCACQVRATGKMYACXXXXXXXXXXXXGESMVLIEKQILQKI------NSRF 175
LG+G FG+V C A GK + E +L+KI N
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---EINVLKKIKEKDKENKFL 115
Query: 176 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAAEVLCGLEHLHY 235
V ++ + +C+ ++ +F + +P + + R A ++ L LH
Sbjct: 116 CVLMSDWFNFHGHMCIAFELLGKNTFEF-LKENNFQP-YPLPHVRHMAYQLCHALRFLHE 173
Query: 236 IGLVYRDCKPENILLDDY-------------------GHVRISDLGLAVEIPEGESVRGR 276
L + D KPENIL + +R++D G A E +
Sbjct: 174 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI-- 231
Query: 277 VGTVGYMAPEVIDNEKYTYSPDWFSFGCLIFEMIEGQAPFR 317
V T Y PEVI + D +S GC++FE G F+
Sbjct: 232 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 116 FRMYRVLGKGGFGEVCACQVRATGKMY--ACXXXXXXXXXXXXGESMVLIEKQILQKINS 173
F+ +VLG G FG V G+ +L E ++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 174 RFVVSLAYAYETKDALCLVLTIMNGGDL----KFHIYNMGGEPGFDIARARFYAAEVLCG 229
V L T + L++ +M G L + H N+G + + + ++ G
Sbjct: 81 PHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN------WCVQIAKG 133
Query: 230 LEHLHYIGLVYRDCKPENILLDDYGHVRISDLG----LAVEIPEGESVRGRVGTVGYMAP 285
+ +L LV+RD N+L+ HV+I+D G L E E + G+V + +MA
Sbjct: 134 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMAL 192
Query: 286 EVIDNEKYTYSPDWFSFGCLIFEMIE-GQAPF 316
E I + YT+ D +S+G ++E++ G P+
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 33/225 (14%)
Query: 108 IQPITYKTFRMYRVLGKGGFGEVCACQVRATG---KMYACXXXXXXXXXXXXGESMVLIE 164
+Q + + +GKG +GEV + K+++ +++L
Sbjct: 2 MQRTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 61
Query: 165 KQILQKINSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFDIARARFYAA 224
+ IL F+ S + + L L+ G L Y+ D
Sbjct: 62 ENILG-----FIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVL 112
Query: 225 EVLCGLEHLHY--------IGLVYRDCKPENILLDDYGHVRISDLGLAVEIPEGESV--- 273
+ GL HLH + +RD K +NIL+ G I+DLGLAV + +
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
Query: 274 --RGRVGTVGYMAPEVIDN-------EKYTYSPDWFSFGCLIFEM 309
RVGT YMAPEV+D + Y W +FG +++E+
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW-AFGLVLWEV 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,285,999
Number of Sequences: 62578
Number of extensions: 856140
Number of successful extensions: 5955
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 2354
Number of HSP's gapped (non-prelim): 1864
length of query: 767
length of database: 14,973,337
effective HSP length: 106
effective length of query: 661
effective length of database: 8,340,069
effective search space: 5512785609
effective search space used: 5512785609
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)