Query psy11876
Match_columns 68
No_of_seqs 107 out of 2666
Neff 12.5
Searched_HMMs 46136
Date Fri Aug 16 21:13:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11876.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11876hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.8 3E-18 6.5E-23 83.3 6.4 65 2-67 123-187 (480)
2 KOG0272|consensus 99.7 5.5E-17 1.2E-21 79.4 6.2 65 2-67 311-375 (459)
3 KOG0263|consensus 99.7 4E-16 8.6E-21 80.3 7.5 65 2-67 543-607 (707)
4 KOG0266|consensus 99.7 1.4E-15 3.1E-20 76.4 8.9 68 1-68 210-277 (456)
5 KOG0271|consensus 99.7 3.8E-16 8.3E-21 76.2 6.2 67 1-68 374-440 (480)
6 KOG0291|consensus 99.7 2.2E-15 4.8E-20 78.2 7.9 65 2-67 358-422 (893)
7 KOG0279|consensus 99.6 4.5E-15 9.6E-20 70.0 7.1 65 1-66 70-134 (315)
8 KOG0266|consensus 99.6 1.5E-14 3.2E-19 72.8 8.9 66 2-68 254-319 (456)
9 KOG0263|consensus 99.6 3.5E-15 7.5E-20 77.0 6.1 66 1-67 584-649 (707)
10 KOG0295|consensus 99.6 1.8E-14 3.9E-19 69.9 8.2 61 7-68 305-365 (406)
11 KOG0264|consensus 99.6 1.7E-14 3.7E-19 71.0 7.8 64 5-68 284-348 (422)
12 KOG0272|consensus 99.6 5.1E-15 1.1E-19 72.7 5.9 65 2-67 353-418 (459)
13 KOG0289|consensus 99.6 1.3E-14 2.8E-19 71.7 6.9 66 2-68 355-420 (506)
14 KOG1273|consensus 99.6 1.3E-14 2.8E-19 69.7 6.4 65 2-67 31-95 (405)
15 PTZ00421 coronin; Provisional 99.6 6.3E-14 1.4E-18 71.1 9.2 66 2-68 133-199 (493)
16 KOG0315|consensus 99.6 3.5E-14 7.6E-19 66.5 7.0 66 2-67 223-288 (311)
17 KOG0319|consensus 99.6 3.7E-14 8E-19 73.4 7.1 65 2-67 471-535 (775)
18 KOG0279|consensus 99.6 5.2E-14 1.1E-18 66.5 6.9 66 2-68 156-223 (315)
19 KOG0286|consensus 99.6 5.5E-14 1.2E-18 66.9 7.0 65 2-67 194-259 (343)
20 KOG0318|consensus 99.6 1.6E-13 3.5E-18 69.2 8.6 65 2-67 198-265 (603)
21 KOG0284|consensus 99.5 4.3E-14 9.2E-19 69.5 6.3 67 1-68 187-253 (464)
22 KOG0278|consensus 99.5 2.1E-13 4.6E-18 64.1 7.0 65 2-67 232-297 (334)
23 PTZ00421 coronin; Provisional 99.5 8E-13 1.7E-17 67.2 9.6 66 2-67 83-156 (493)
24 KOG0316|consensus 99.5 1.7E-13 3.6E-18 64.0 6.3 66 2-68 67-132 (307)
25 KOG0283|consensus 99.5 2.2E-13 4.7E-18 70.8 7.2 62 4-67 378-440 (712)
26 KOG0285|consensus 99.5 3.7E-13 8.1E-18 65.7 7.1 64 3-67 244-307 (460)
27 KOG0293|consensus 99.5 1E-13 2.2E-18 68.5 5.3 62 5-67 451-513 (519)
28 KOG0302|consensus 99.5 1.1E-12 2.4E-17 64.3 7.6 64 5-68 269-333 (440)
29 KOG0282|consensus 99.5 5.8E-14 1.3E-18 70.0 3.3 67 2-68 222-289 (503)
30 KOG0265|consensus 99.5 1.5E-12 3.2E-17 62.3 7.7 67 2-68 55-121 (338)
31 KOG0269|consensus 99.5 3.9E-13 8.3E-18 70.2 6.1 66 2-67 184-250 (839)
32 KOG0639|consensus 99.5 3.2E-13 7E-18 68.3 5.3 67 1-68 516-582 (705)
33 KOG0319|consensus 99.4 1.5E-12 3.2E-17 67.7 7.5 66 2-68 513-578 (775)
34 KOG0276|consensus 99.4 9.5E-13 2.1E-17 67.9 6.6 66 2-68 148-216 (794)
35 KOG2394|consensus 99.4 3.6E-13 7.9E-18 68.3 4.7 66 1-67 297-362 (636)
36 PTZ00420 coronin; Provisional 99.4 9.8E-12 2.1E-16 64.2 9.8 67 2-68 82-157 (568)
37 KOG0273|consensus 99.4 3.3E-12 7E-17 64.0 7.8 61 6-67 422-482 (524)
38 KOG0282|consensus 99.4 1.2E-12 2.6E-17 65.5 5.8 63 2-65 440-503 (503)
39 KOG0313|consensus 99.4 1.4E-12 3.1E-17 63.8 5.8 66 3-68 309-377 (423)
40 KOG0315|consensus 99.4 4.4E-12 9.5E-17 59.7 7.1 63 3-67 92-154 (311)
41 PLN00181 protein SPA1-RELATED; 99.4 1.6E-11 3.4E-16 65.4 9.3 62 5-67 544-606 (793)
42 KOG0285|consensus 99.4 5.5E-12 1.2E-16 61.8 7.0 65 2-67 159-223 (460)
43 PTZ00420 coronin; Provisional 99.4 1.9E-11 4.1E-16 63.2 9.3 65 2-68 133-198 (568)
44 KOG0322|consensus 99.4 2.3E-12 5E-17 60.9 4.9 64 2-66 259-322 (323)
45 KOG0647|consensus 99.4 1.2E-11 2.5E-16 59.4 7.0 67 2-68 35-103 (347)
46 KOG0292|consensus 99.4 9.3E-12 2E-16 66.5 7.2 63 4-67 103-165 (1202)
47 KOG0286|consensus 99.4 1.9E-11 4.1E-16 58.6 7.5 66 2-68 152-218 (343)
48 KOG0277|consensus 99.4 1.3E-11 2.9E-16 58.2 6.9 66 2-68 155-222 (311)
49 KOG0264|consensus 99.3 9.8E-12 2.1E-16 61.6 6.5 64 5-68 239-304 (422)
50 KOG0265|consensus 99.3 9.6E-12 2.1E-16 59.6 6.1 64 3-67 99-163 (338)
51 KOG0273|consensus 99.3 3.6E-11 7.8E-16 60.4 8.3 62 5-67 328-389 (524)
52 KOG0284|consensus 99.3 9.6E-12 2.1E-16 61.5 5.6 63 4-67 232-294 (464)
53 KOG0645|consensus 99.3 6.6E-11 1.4E-15 56.2 8.1 66 2-67 69-135 (312)
54 KOG0310|consensus 99.3 3E-11 6.4E-16 60.6 7.3 62 5-67 122-184 (487)
55 KOG0276|consensus 99.3 6E-12 1.3E-16 65.1 4.9 62 5-67 196-257 (794)
56 KOG0275|consensus 99.3 3.3E-12 7.1E-17 62.2 3.9 66 2-67 221-293 (508)
57 KOG0772|consensus 99.3 7.5E-12 1.6E-16 63.5 5.0 67 2-68 325-395 (641)
58 KOG0299|consensus 99.3 1.3E-11 2.9E-16 61.6 5.8 66 1-67 209-274 (479)
59 PF00400 WD40: WD domain, G-be 99.3 4.8E-11 1E-15 41.6 5.8 37 29-65 3-39 (39)
60 KOG1034|consensus 99.3 6.7E-11 1.5E-15 57.5 7.9 61 6-67 148-211 (385)
61 KOG1332|consensus 99.3 1E-10 2.3E-15 55.0 8.2 62 6-67 23-88 (299)
62 KOG0281|consensus 99.3 5.9E-12 1.3E-16 61.7 4.0 62 4-68 205-266 (499)
63 KOG0318|consensus 99.3 4.4E-11 9.6E-16 60.8 7.1 66 2-67 495-560 (603)
64 KOG0292|consensus 99.3 1.9E-11 4.1E-16 65.4 6.0 65 2-67 59-123 (1202)
65 KOG0293|consensus 99.3 4.3E-11 9.2E-16 59.6 6.6 66 2-67 232-299 (519)
66 KOG0302|consensus 99.3 5.9E-11 1.3E-15 58.5 6.9 61 7-67 315-378 (440)
67 KOG0308|consensus 99.3 6.9E-11 1.5E-15 61.3 7.2 64 3-67 180-243 (735)
68 KOG0973|consensus 99.3 5.8E-11 1.3E-15 63.7 7.1 67 2-68 77-160 (942)
69 cd00200 WD40 WD40 domain, foun 99.3 3.5E-10 7.5E-15 52.8 9.0 65 2-67 17-81 (289)
70 KOG0277|consensus 99.3 1.5E-10 3.2E-15 54.8 7.6 61 6-67 117-178 (311)
71 KOG0291|consensus 99.3 9E-11 1.9E-15 61.8 7.4 63 4-67 317-380 (893)
72 KOG0296|consensus 99.3 1.2E-10 2.6E-15 57.1 7.4 62 5-67 337-398 (399)
73 KOG0645|consensus 99.3 1.2E-10 2.6E-15 55.4 7.2 65 2-66 113-179 (312)
74 KOG0296|consensus 99.3 1.9E-10 4.1E-15 56.4 8.0 66 2-68 72-137 (399)
75 KOG4283|consensus 99.3 1.4E-10 3E-15 56.0 7.4 60 8-68 160-220 (397)
76 KOG0305|consensus 99.3 5.3E-11 1.2E-15 60.4 6.3 65 2-67 309-376 (484)
77 KOG0295|consensus 99.3 1.1E-10 2.4E-15 57.2 7.1 65 2-67 201-265 (406)
78 KOG1007|consensus 99.3 8.9E-11 1.9E-15 56.4 6.7 64 3-66 223-288 (370)
79 KOG0270|consensus 99.3 9.8E-11 2.1E-15 58.4 7.0 61 6-67 256-317 (463)
80 KOG0316|consensus 99.3 6.1E-11 1.3E-15 55.7 5.9 65 3-68 26-90 (307)
81 KOG0288|consensus 99.2 5.5E-11 1.2E-15 59.0 5.9 64 1-65 394-459 (459)
82 KOG1445|consensus 99.2 1.5E-11 3.2E-16 64.1 4.1 61 7-68 691-751 (1012)
83 KOG0281|consensus 99.2 4.2E-11 9E-16 58.8 5.4 60 5-67 329-388 (499)
84 KOG0771|consensus 99.2 3.8E-11 8.2E-16 59.2 5.1 64 2-67 152-215 (398)
85 KOG0278|consensus 99.2 5.7E-12 1.2E-16 59.4 2.2 67 2-68 108-174 (334)
86 KOG1446|consensus 99.2 4E-10 8.7E-15 54.2 8.2 40 28-67 91-130 (311)
87 PLN00181 protein SPA1-RELATED; 99.2 5E-10 1.1E-14 59.9 9.3 63 4-67 628-690 (793)
88 KOG0640|consensus 99.2 1E-10 2.2E-15 56.8 5.9 68 1-68 119-203 (430)
89 KOG0306|consensus 99.2 7.3E-11 1.6E-15 62.1 5.7 64 2-66 558-621 (888)
90 KOG2096|consensus 99.2 1.8E-10 3.8E-15 56.1 6.3 67 1-67 235-308 (420)
91 cd00200 WD40 WD40 domain, foun 99.2 7.2E-10 1.6E-14 51.8 8.2 63 2-65 227-289 (289)
92 KOG0649|consensus 99.2 5.1E-10 1.1E-14 52.9 7.2 64 4-68 124-187 (325)
93 KOG0647|consensus 99.2 5.6E-10 1.2E-14 53.8 7.3 64 3-68 81-146 (347)
94 KOG0643|consensus 99.2 8.9E-10 1.9E-14 52.6 7.8 65 3-68 19-83 (327)
95 KOG3914|consensus 99.2 2E-10 4.4E-15 56.6 5.9 67 1-68 158-224 (390)
96 KOG0274|consensus 99.2 6.3E-10 1.4E-14 57.5 7.9 64 3-68 338-401 (537)
97 KOG1407|consensus 99.2 1.4E-10 3E-15 55.0 5.1 63 2-65 197-259 (313)
98 KOG0306|consensus 99.2 5.6E-10 1.2E-14 59.0 7.6 64 2-66 516-579 (888)
99 KOG0269|consensus 99.2 2.1E-10 4.5E-15 60.5 6.1 63 5-68 145-208 (839)
100 KOG0294|consensus 99.2 8.5E-10 1.8E-14 53.5 7.4 65 2-67 215-281 (362)
101 KOG1063|consensus 99.1 2.9E-10 6.2E-15 59.4 5.7 67 1-67 579-648 (764)
102 KOG0283|consensus 99.1 5.9E-10 1.3E-14 58.6 6.8 64 2-67 417-481 (712)
103 KOG1272|consensus 99.1 1.6E-10 3.5E-15 58.2 4.5 65 3-68 260-324 (545)
104 KOG0973|consensus 99.1 6.4E-10 1.4E-14 59.9 6.8 63 3-66 138-200 (942)
105 KOG0275|consensus 99.1 1.5E-10 3.3E-15 56.6 4.1 65 2-67 314-378 (508)
106 KOG0310|consensus 99.1 2.2E-10 4.7E-15 57.7 4.6 66 2-68 76-142 (487)
107 KOG0294|consensus 99.1 1.4E-09 3.1E-14 52.7 6.4 59 7-66 98-156 (362)
108 KOG1539|consensus 99.1 2.3E-10 5E-15 60.7 4.0 61 7-68 547-607 (910)
109 KOG0303|consensus 99.1 8.4E-10 1.8E-14 54.9 5.4 60 7-68 145-204 (472)
110 KOG0303|consensus 99.1 5.7E-10 1.2E-14 55.5 4.8 64 5-68 93-163 (472)
111 KOG1274|consensus 99.1 4.9E-09 1.1E-13 56.3 8.2 65 2-67 104-168 (933)
112 KOG0267|consensus 99.1 1.6E-10 3.5E-15 60.6 2.8 65 2-67 162-226 (825)
113 KOG0308|consensus 99.1 2.6E-09 5.7E-14 55.8 7.0 65 2-67 221-285 (735)
114 KOG0646|consensus 99.1 9.3E-10 2E-14 55.3 5.2 63 3-66 90-152 (476)
115 KOG0290|consensus 99.0 2.6E-09 5.6E-14 51.6 6.4 62 7-68 210-319 (364)
116 KOG1446|consensus 99.0 1.5E-08 3.3E-13 49.0 8.7 66 2-68 195-263 (311)
117 KOG1036|consensus 99.0 8.9E-09 1.9E-13 49.8 7.7 63 3-67 62-124 (323)
118 KOG0643|consensus 99.0 2.4E-09 5.3E-14 51.2 5.7 66 3-68 156-221 (327)
119 KOG0301|consensus 99.0 7.2E-09 1.6E-13 54.4 7.7 61 4-66 188-248 (745)
120 KOG0641|consensus 99.0 8.7E-09 1.9E-13 48.6 7.2 65 2-67 239-303 (350)
121 KOG0274|consensus 99.0 8.6E-09 1.9E-13 53.5 7.9 60 5-67 300-359 (537)
122 KOG0313|consensus 99.0 1E-08 2.2E-13 50.9 7.6 61 5-66 357-417 (423)
123 KOG0300|consensus 99.0 5.2E-09 1.1E-13 51.3 6.4 65 3-68 323-387 (481)
124 PF08662 eIF2A: Eukaryotic tra 99.0 3.1E-08 6.7E-13 45.6 8.5 63 2-67 108-179 (194)
125 KOG0642|consensus 99.0 4.9E-09 1.1E-13 53.9 6.3 63 4-66 304-373 (577)
126 KOG0772|consensus 99.0 5.4E-09 1.2E-13 53.7 5.9 63 5-67 280-347 (641)
127 KOG1408|consensus 99.0 6.5E-10 1.4E-14 58.9 2.8 66 1-67 466-534 (1080)
128 KOG0646|consensus 99.0 3.1E-08 6.7E-13 50.1 8.3 66 2-67 131-206 (476)
129 KOG0305|consensus 98.9 3.7E-09 8.1E-14 54.0 4.9 62 5-66 269-330 (484)
130 KOG0267|consensus 98.9 4.4E-09 9.6E-14 55.5 5.2 65 2-67 120-184 (825)
131 KOG0268|consensus 98.9 1.7E-09 3.7E-14 53.4 3.5 66 2-67 237-302 (433)
132 KOG0640|consensus 98.9 1.7E-08 3.7E-13 49.4 6.5 64 2-66 224-290 (430)
133 KOG0642|consensus 98.9 1.3E-08 2.8E-13 52.4 6.4 66 2-67 352-426 (577)
134 KOG0290|consensus 98.9 4.4E-08 9.6E-13 47.5 7.8 64 5-68 162-228 (364)
135 KOG0300|consensus 98.9 5.3E-09 1.1E-13 51.3 4.6 62 5-67 283-344 (481)
136 KOG2445|consensus 98.9 6.3E-08 1.4E-12 47.2 8.1 64 3-66 22-90 (361)
137 KOG1007|consensus 98.9 7.9E-09 1.7E-13 50.0 5.0 63 5-68 183-246 (370)
138 KOG1539|consensus 98.9 6E-08 1.3E-12 52.1 7.9 62 2-65 584-646 (910)
139 KOG1009|consensus 98.9 2E-08 4.4E-13 50.1 5.8 66 2-67 73-153 (434)
140 KOG0268|consensus 98.9 6.6E-09 1.4E-13 51.4 4.0 64 2-66 280-344 (433)
141 KOG0641|consensus 98.8 5.6E-08 1.2E-12 46.0 6.8 62 5-67 193-261 (350)
142 KOG1332|consensus 98.8 3.1E-08 6.7E-13 47.0 5.9 63 5-67 69-134 (299)
143 KOG0321|consensus 98.8 1.1E-08 2.3E-13 53.5 4.7 62 5-67 111-175 (720)
144 KOG1034|consensus 98.8 1.3E-08 2.9E-13 49.8 4.7 61 7-68 106-167 (385)
145 KOG1274|consensus 98.8 8.1E-08 1.8E-12 51.9 7.9 65 2-67 196-262 (933)
146 KOG0288|consensus 98.8 2E-09 4.4E-14 53.7 1.9 65 3-68 228-292 (459)
147 KOG3881|consensus 98.8 3.6E-08 7.8E-13 49.1 6.0 67 2-68 255-321 (412)
148 KOG4328|consensus 98.8 1.4E-08 3E-13 51.3 4.7 65 4-68 289-354 (498)
149 KOG2055|consensus 98.8 1.4E-07 3E-12 48.0 8.0 65 2-67 352-417 (514)
150 KOG0639|consensus 98.8 1.2E-08 2.6E-13 52.5 4.3 66 2-68 473-540 (705)
151 KOG1407|consensus 98.8 6.8E-08 1.5E-12 46.3 6.3 60 7-67 160-219 (313)
152 KOG1188|consensus 98.8 6.3E-08 1.4E-12 47.6 6.3 61 7-68 41-103 (376)
153 KOG0299|consensus 98.8 1.2E-07 2.7E-12 48.0 7.3 65 2-67 334-410 (479)
154 PF08662 eIF2A: Eukaryotic tra 98.8 3.8E-07 8.3E-12 42.1 8.5 62 2-67 67-133 (194)
155 KOG0644|consensus 98.8 2.2E-09 4.7E-14 57.6 1.2 61 2-67 240-300 (1113)
156 KOG0280|consensus 98.8 1.4E-07 3E-12 45.8 7.0 63 5-67 177-241 (339)
157 PF11768 DUF3312: Protein of u 98.8 2.3E-07 5E-12 48.2 7.7 63 2-67 267-329 (545)
158 KOG0289|consensus 98.8 3E-07 6.6E-12 46.6 7.9 64 3-67 312-377 (506)
159 KOG4283|consensus 98.7 5.7E-08 1.2E-12 47.3 5.2 61 7-67 202-276 (397)
160 KOG4714|consensus 98.7 2.1E-08 4.5E-13 48.0 3.5 62 6-67 192-254 (319)
161 KOG0321|consensus 98.7 7E-08 1.5E-12 50.7 5.5 66 2-67 325-391 (720)
162 KOG4328|consensus 98.7 1.3E-07 2.7E-12 48.1 6.0 61 6-66 335-398 (498)
163 KOG0974|consensus 98.7 2.2E-07 4.9E-12 50.7 7.2 62 3-66 184-245 (967)
164 KOG2919|consensus 98.7 2.5E-07 5.4E-12 45.6 6.6 66 2-68 215-282 (406)
165 KOG2110|consensus 98.7 8.1E-07 1.7E-11 44.3 8.0 66 1-67 180-248 (391)
166 KOG2048|consensus 98.7 5E-07 1.1E-11 47.7 7.7 65 2-67 118-184 (691)
167 KOG2111|consensus 98.7 1E-06 2.2E-11 43.2 8.1 65 2-67 189-256 (346)
168 KOG0270|consensus 98.7 4.4E-07 9.6E-12 46.0 6.9 61 7-67 343-404 (463)
169 KOG0307|consensus 98.7 2.3E-08 4.9E-13 54.7 2.6 63 6-68 129-193 (1049)
170 KOG2110|consensus 98.7 1.1E-06 2.3E-11 43.9 7.9 50 16-66 153-203 (391)
171 KOG1310|consensus 98.6 5E-07 1.1E-11 47.3 6.8 64 3-67 59-125 (758)
172 KOG1538|consensus 98.6 3.6E-07 7.9E-12 48.9 6.2 63 2-66 20-82 (1081)
173 KOG1063|consensus 98.6 3.9E-07 8.5E-12 48.4 5.9 64 2-66 533-601 (764)
174 KOG1445|consensus 98.6 4.6E-07 9.9E-12 48.2 5.7 59 7-67 142-200 (1012)
175 KOG2445|consensus 98.6 2.3E-06 4.9E-11 42.1 7.6 61 6-66 73-143 (361)
176 KOG2394|consensus 98.6 6.2E-07 1.3E-11 46.6 5.9 43 3-46 341-383 (636)
177 KOG2106|consensus 98.6 2.6E-06 5.6E-11 44.3 8.0 65 2-66 455-520 (626)
178 TIGR03866 PQQ_ABC_repeats PQQ- 98.6 3.2E-06 6.9E-11 40.5 8.1 59 7-67 2-61 (300)
179 KOG2055|consensus 98.5 1E-06 2.2E-11 45.1 6.5 65 2-68 311-375 (514)
180 KOG0307|consensus 98.5 2.4E-07 5.3E-12 51.0 4.5 62 7-68 220-285 (1049)
181 KOG4378|consensus 98.5 4.9E-07 1.1E-11 46.8 5.3 61 7-67 178-239 (673)
182 KOG1009|consensus 98.5 9.8E-07 2.1E-11 44.4 6.2 61 7-67 27-95 (434)
183 KOG1963|consensus 98.5 1.2E-06 2.6E-11 47.3 6.8 68 1-68 212-282 (792)
184 KOG2106|consensus 98.5 1.1E-06 2.4E-11 45.5 6.5 61 3-65 254-314 (626)
185 KOG1517|consensus 98.5 1.9E-06 4.2E-11 48.1 7.6 63 5-67 1220-1287(1387)
186 KOG1524|consensus 98.5 1.2E-06 2.6E-11 45.8 6.2 64 3-66 113-215 (737)
187 TIGR03866 PQQ_ABC_repeats PQQ- 98.5 5.5E-06 1.2E-10 39.7 8.3 65 2-68 214-280 (300)
188 smart00320 WD40 WD40 repeats. 98.5 1.3E-06 2.8E-11 29.0 5.1 36 30-65 5-40 (40)
189 COG2319 FOG: WD40 repeat [Gene 98.5 7.5E-06 1.6E-10 40.1 8.8 65 2-67 163-229 (466)
190 KOG0301|consensus 98.5 8.1E-07 1.8E-11 47.2 5.2 55 8-66 153-207 (745)
191 KOG1408|consensus 98.4 1.5E-06 3.3E-11 46.9 5.8 65 2-67 649-713 (1080)
192 KOG2919|consensus 98.4 8.2E-07 1.8E-11 43.9 4.5 56 3-58 306-361 (406)
193 KOG4378|consensus 98.4 2.8E-06 6E-11 44.2 6.4 64 2-67 216-280 (673)
194 KOG0771|consensus 98.4 2.1E-06 4.6E-11 43.2 5.6 64 2-65 289-352 (398)
195 KOG2096|consensus 98.4 5.5E-06 1.2E-10 41.1 6.9 60 5-66 198-257 (420)
196 KOG0974|consensus 98.4 6E-06 1.3E-10 45.6 7.3 65 3-68 142-206 (967)
197 KOG1240|consensus 98.4 9.8E-06 2.1E-10 45.9 7.9 65 3-67 1058-1128(1431)
198 PF02239 Cytochrom_D1: Cytochr 98.4 1.1E-05 2.3E-10 40.8 7.4 64 2-67 44-108 (369)
199 KOG2315|consensus 98.3 1.1E-05 2.5E-10 42.2 7.4 63 2-67 319-390 (566)
200 KOG2048|consensus 98.3 1.5E-05 3.2E-10 42.6 7.8 66 2-68 33-99 (691)
201 KOG0650|consensus 98.3 1.3E-05 2.9E-10 42.5 7.5 45 3-49 409-453 (733)
202 KOG3881|consensus 98.3 1.3E-05 2.7E-10 40.5 7.0 63 6-68 216-278 (412)
203 KOG1188|consensus 98.3 3E-06 6.6E-11 42.0 4.9 62 6-67 129-196 (376)
204 KOG1036|consensus 98.3 3.4E-06 7.4E-11 41.3 4.9 54 2-56 240-293 (323)
205 KOG1523|consensus 98.3 7.9E-06 1.7E-10 40.4 6.0 65 2-66 18-84 (361)
206 KOG0644|consensus 98.3 5.5E-07 1.2E-11 49.0 2.2 63 4-67 200-262 (1113)
207 KOG2139|consensus 98.3 1.7E-05 3.8E-10 40.0 6.9 63 4-67 205-268 (445)
208 COG2319 FOG: WD40 repeat [Gene 98.3 5.5E-05 1.2E-09 37.1 9.4 66 2-67 249-314 (466)
209 KOG1645|consensus 98.3 1.9E-05 4.2E-10 40.2 6.8 65 2-68 201-267 (463)
210 KOG2321|consensus 98.3 1.6E-05 3.5E-10 42.1 6.8 63 5-68 186-259 (703)
211 KOG1587|consensus 98.2 3.7E-06 8.1E-11 44.3 4.5 58 9-67 414-472 (555)
212 KOG4497|consensus 98.2 3.2E-05 6.8E-10 38.8 6.9 60 7-67 62-122 (447)
213 PF00400 WD40: WD domain, G-be 98.2 4.2E-06 9E-11 28.8 3.1 21 2-22 19-39 (39)
214 KOG1273|consensus 98.2 4.6E-05 1E-09 38.0 7.4 54 3-58 74-128 (405)
215 KOG4190|consensus 98.2 1.1E-05 2.4E-10 42.9 5.1 60 5-66 746-811 (1034)
216 KOG1064|consensus 98.1 7.5E-06 1.6E-10 48.1 4.6 56 13-68 2312-2367(2439)
217 KOG1275|consensus 98.1 1.8E-05 3.9E-10 43.9 5.6 63 2-67 183-254 (1118)
218 KOG1587|consensus 98.1 6.8E-05 1.5E-09 39.8 7.5 63 5-67 254-323 (555)
219 KOG2695|consensus 98.1 2.6E-05 5.6E-10 39.2 5.4 63 5-67 310-376 (425)
220 KOG1523|consensus 98.1 3.8E-05 8.1E-10 38.2 5.9 65 3-67 64-130 (361)
221 KOG4227|consensus 98.1 5E-05 1.1E-09 38.9 6.4 66 2-67 64-135 (609)
222 PRK01742 tolB translocation pr 98.1 8.1E-05 1.7E-09 38.2 7.2 65 2-66 255-321 (429)
223 KOG1310|consensus 98.1 4.7E-05 1E-09 40.4 6.2 61 5-66 635-695 (758)
224 KOG0650|consensus 98.0 1.1E-05 2.4E-10 42.8 3.8 63 2-64 615-677 (733)
225 KOG1538|consensus 98.0 7.2E-05 1.6E-09 40.7 6.5 63 2-66 230-292 (1081)
226 KOG1334|consensus 98.0 5.2E-06 1.1E-10 42.9 2.1 62 4-66 404-465 (559)
227 PRK11028 6-phosphogluconolacto 98.0 0.00023 5E-09 35.2 7.6 65 2-67 133-205 (330)
228 KOG0649|consensus 98.0 0.00023 4.9E-09 34.6 7.0 59 7-67 169-235 (325)
229 KOG2111|consensus 98.0 0.0002 4.4E-09 35.7 6.9 56 12-67 155-212 (346)
230 KOG1409|consensus 97.9 4.1E-05 8.9E-10 38.4 4.0 63 5-67 208-270 (404)
231 PRK11028 6-phosphogluconolacto 97.9 0.00031 6.8E-09 34.8 7.1 64 2-66 235-303 (330)
232 KOG1524|consensus 97.9 2.8E-05 6E-10 41.1 3.3 57 8-66 77-133 (737)
233 KOG4227|consensus 97.9 0.00017 3.6E-09 37.1 5.8 65 2-66 300-386 (609)
234 KOG4532|consensus 97.8 0.00065 1.4E-08 33.5 7.7 66 2-67 166-233 (344)
235 KOG2695|consensus 97.8 0.00015 3.2E-09 36.6 5.2 61 6-67 264-329 (425)
236 KOG1963|consensus 97.8 0.00058 1.3E-08 37.7 7.4 63 2-66 259-321 (792)
237 KOG4547|consensus 97.8 0.00033 7.2E-09 37.1 6.2 61 2-65 152-218 (541)
238 KOG2041|consensus 97.7 0.00032 6.9E-09 38.7 5.4 63 4-66 24-100 (1189)
239 KOG0280|consensus 97.7 0.00072 1.6E-08 33.6 6.1 64 4-67 131-196 (339)
240 PRK01742 tolB translocation pr 97.7 0.0017 3.6E-08 33.6 7.9 61 2-64 211-275 (429)
241 KOG4640|consensus 97.6 0.001 2.2E-08 35.9 6.7 62 4-67 30-92 (665)
242 KOG1272|consensus 97.6 0.0003 6.6E-09 36.7 4.6 59 2-64 301-359 (545)
243 PF12894 Apc4_WD40: Anaphase-p 97.6 0.00048 1E-08 25.1 5.0 31 37-67 11-41 (47)
244 KOG4532|consensus 97.6 0.002 4.3E-08 31.9 7.5 65 3-67 212-282 (344)
245 KOG1517|consensus 97.6 0.00074 1.6E-08 38.7 6.0 59 8-67 1179-1239(1387)
246 KOG2321|consensus 97.5 0.00098 2.1E-08 35.9 5.9 55 12-67 151-205 (703)
247 PRK02889 tolB translocation pr 97.5 0.0019 4.1E-08 33.4 6.5 64 2-65 247-312 (427)
248 KOG4547|consensus 97.5 0.0026 5.7E-08 34.0 6.8 59 6-67 114-172 (541)
249 PRK02889 tolB translocation pr 97.4 0.0041 9E-08 32.2 8.1 62 2-65 203-268 (427)
250 PF15492 Nbas_N: Neuroblastoma 97.4 0.0026 5.6E-08 31.4 6.2 32 36-67 228-259 (282)
251 KOG4497|consensus 97.4 0.0018 3.8E-08 32.9 5.7 64 1-66 325-390 (447)
252 COG4946 Uncharacterized protei 97.4 0.006 1.3E-07 32.5 8.2 65 2-67 409-477 (668)
253 PLN02919 haloacid dehalogenase 97.3 0.0094 2E-07 34.5 8.9 65 2-67 811-888 (1057)
254 KOG0322|consensus 97.2 0.00045 9.8E-09 33.9 2.6 60 6-67 25-85 (323)
255 PF02239 Cytochrom_D1: Cytochr 97.2 0.008 1.7E-07 30.8 7.7 61 7-68 6-67 (369)
256 KOG1409|consensus 97.1 0.0091 2E-07 30.6 7.5 58 9-66 168-226 (404)
257 PF08553 VID27: VID27 cytoplas 97.1 0.0062 1.3E-07 34.2 6.4 57 6-64 588-644 (794)
258 KOG1334|consensus 97.1 0.00084 1.8E-08 35.4 3.1 63 3-65 151-215 (559)
259 KOG0309|consensus 97.1 0.0027 5.9E-08 35.4 5.0 61 7-67 128-188 (1081)
260 KOG2139|consensus 97.1 0.012 2.5E-07 30.4 6.7 56 2-58 246-302 (445)
261 PF15492 Nbas_N: Neuroblastoma 97.0 0.01 2.2E-07 29.4 8.3 65 2-67 5-73 (282)
262 KOG4714|consensus 97.0 0.0021 4.5E-08 31.7 3.8 30 39-68 181-211 (319)
263 KOG2079|consensus 97.0 0.0022 4.7E-08 36.9 4.0 61 8-68 101-161 (1206)
264 KOG3621|consensus 97.0 0.0034 7.4E-08 34.5 4.5 64 2-65 84-152 (726)
265 KOG3617|consensus 96.9 0.0028 6E-08 36.0 4.1 59 8-67 73-131 (1416)
266 KOG1240|consensus 96.9 0.013 2.9E-07 34.5 6.6 65 2-67 1203-1273(1431)
267 PRK04922 tolB translocation pr 96.9 0.018 3.9E-07 30.0 8.3 64 2-67 299-368 (433)
268 PRK05137 tolB translocation pr 96.9 0.019 4E-07 30.0 7.7 63 2-66 253-321 (435)
269 KOG1064|consensus 96.9 0.0061 1.3E-07 37.3 5.1 61 6-67 2220-2281(2439)
270 PRK03629 tolB translocation pr 96.8 0.022 4.8E-07 29.8 8.1 61 2-64 250-314 (429)
271 KOG1354|consensus 96.8 0.019 4.2E-07 29.6 5.9 65 3-67 34-116 (433)
272 PRK04922 tolB translocation pr 96.7 0.027 5.9E-07 29.4 8.3 64 2-67 211-280 (433)
273 KOG2066|consensus 96.7 0.022 4.9E-07 32.1 6.3 58 5-65 82-144 (846)
274 KOG0309|consensus 96.6 0.0016 3.6E-08 36.2 1.9 59 9-67 173-232 (1081)
275 PRK03629 tolB translocation pr 96.5 0.039 8.5E-07 28.9 8.0 66 2-67 294-363 (429)
276 TIGR02800 propeller_TolB tol-p 96.5 0.04 8.7E-07 28.3 8.6 64 2-67 197-266 (417)
277 KOG2079|consensus 96.4 0.035 7.5E-07 32.5 6.0 58 2-60 138-198 (1206)
278 TIGR02800 propeller_TolB tol-p 96.4 0.043 9.4E-07 28.2 8.1 64 2-67 285-354 (417)
279 PRK00178 tolB translocation pr 96.4 0.046 1E-06 28.4 8.2 64 2-67 206-275 (430)
280 PF10282 Lactonase: Lactonase, 96.4 0.046 1E-06 27.8 8.1 65 2-66 252-321 (345)
281 PF04762 IKI3: IKI3 family; I 96.3 0.091 2E-06 30.5 8.2 61 3-65 84-148 (928)
282 PRK01029 tolB translocation pr 96.3 0.062 1.3E-06 28.3 8.7 66 2-67 288-359 (428)
283 PF07433 DUF1513: Protein of u 96.3 0.054 1.2E-06 27.4 5.7 55 1-55 57-116 (305)
284 COG3490 Uncharacterized protei 96.2 0.057 1.2E-06 27.4 5.7 56 1-56 120-180 (366)
285 KOG2444|consensus 96.2 0.039 8.5E-07 26.8 4.8 61 6-67 114-177 (238)
286 TIGR02658 TTQ_MADH_Hv methylam 96.0 0.085 1.8E-06 27.3 8.6 65 2-67 53-136 (352)
287 KOG3621|consensus 95.9 0.029 6.3E-07 31.2 4.0 66 2-67 41-106 (726)
288 PF11768 DUF3312: Protein of u 95.8 0.046 9.9E-07 29.7 4.4 32 36-67 258-289 (545)
289 PRK00178 tolB translocation pr 95.7 0.12 2.6E-06 27.0 7.8 63 2-66 250-318 (430)
290 KOG2395|consensus 95.6 0.12 2.7E-06 28.3 5.5 50 6-56 441-490 (644)
291 PRK04792 tolB translocation pr 95.5 0.16 3.4E-06 26.9 8.1 61 2-64 269-333 (448)
292 PRK04792 tolB translocation pr 95.5 0.16 3.5E-06 26.9 8.2 63 2-66 225-293 (448)
293 PRK05137 tolB translocation pr 95.5 0.16 3.5E-06 26.7 8.9 49 17-67 183-234 (435)
294 COG5354 Uncharacterized protei 95.2 0.23 5E-06 27.1 7.2 64 2-67 323-395 (561)
295 PLN02919 haloacid dehalogenase 95.2 0.33 7.1E-06 28.8 8.0 66 2-67 747-833 (1057)
296 KOG2114|consensus 95.1 0.12 2.6E-06 29.7 4.8 64 2-67 31-100 (933)
297 KOG4649|consensus 95.0 0.21 4.5E-06 25.3 7.0 60 6-67 63-123 (354)
298 KOG1354|consensus 94.9 0.24 5.3E-06 25.9 7.1 64 2-66 280-358 (433)
299 KOG2066|consensus 94.9 0.33 7.1E-06 27.9 5.9 53 5-66 48-100 (846)
300 TIGR02658 TTQ_MADH_Hv methylam 94.7 0.29 6.2E-06 25.5 9.2 64 2-67 255-330 (352)
301 KOG2377|consensus 94.5 0.39 8.4E-06 26.3 8.1 65 2-66 29-95 (657)
302 KOG3914|consensus 94.3 0.39 8.4E-06 25.3 6.3 38 29-66 143-180 (390)
303 PF10313 DUF2415: Uncharacteri 94.2 0.11 2.4E-06 18.6 4.8 29 39-67 2-33 (43)
304 KOG1008|consensus 94.1 0.06 1.3E-06 30.0 2.2 62 5-67 207-275 (783)
305 PF04053 Coatomer_WDAD: Coatom 94.0 0.49 1.1E-05 25.4 6.8 55 6-65 117-171 (443)
306 PF07569 Hira: TUP1-like enhan 94.0 0.34 7.4E-06 23.4 8.2 62 4-66 20-94 (219)
307 KOG1912|consensus 94.0 0.69 1.5E-05 27.0 6.5 60 6-67 26-97 (1062)
308 KOG1832|consensus 93.9 0.11 2.3E-06 30.5 3.0 64 2-66 1109-1174(1516)
309 PF11715 Nup160: Nucleoporin N 93.8 0.58 1.3E-05 25.5 7.8 29 40-68 217-249 (547)
310 KOG4640|consensus 93.7 0.25 5.4E-06 27.6 4.0 44 3-46 71-114 (665)
311 PRK01029 tolB translocation pr 93.5 0.59 1.3E-05 24.8 7.6 53 2-56 192-249 (428)
312 PF14783 BBS2_Mid: Ciliary BBS 93.4 0.31 6.7E-06 21.2 8.0 55 7-66 16-70 (111)
313 KOG1912|consensus 93.3 0.58 1.3E-05 27.2 5.0 59 7-66 80-142 (1062)
314 PF10282 Lactonase: Lactonase, 93.0 0.65 1.4E-05 23.8 7.9 66 2-67 44-117 (345)
315 PF12234 Rav1p_C: RAVE protein 92.8 1 2.2E-05 25.5 7.5 55 10-65 45-102 (631)
316 TIGR03300 assembly_YfgL outer 92.7 0.74 1.6E-05 23.7 6.3 58 5-64 319-376 (377)
317 PF14655 RAB3GAP2_N: Rab3 GTPa 92.7 0.87 1.9E-05 24.4 7.0 36 2-38 315-350 (415)
318 PRK02888 nitrous-oxide reducta 92.7 1.1 2.3E-05 25.4 7.6 65 2-67 328-404 (635)
319 COG5167 VID27 Protein involved 92.6 1.1 2.3E-05 25.1 6.2 51 5-56 572-622 (776)
320 KOG0882|consensus 92.2 0.04 8.6E-07 29.4 -0.0 62 6-67 20-84 (558)
321 PF07569 Hira: TUP1-like enhan 92.2 0.62 1.3E-05 22.6 3.9 23 46-68 19-41 (219)
322 COG0823 TolB Periplasmic compo 92.0 1.1 2.4E-05 24.0 5.0 63 2-64 245-309 (425)
323 PF00780 CNH: CNH domain; Int 91.7 0.89 1.9E-05 22.3 8.1 60 4-67 5-64 (275)
324 COG4946 Uncharacterized protei 91.5 1.4 3.1E-05 24.3 8.3 60 6-67 371-431 (668)
325 KOG2041|consensus 91.4 1.4 3.1E-05 25.7 5.0 53 4-58 227-279 (1189)
326 COG2706 3-carboxymuconate cycl 91.3 1.3 2.7E-05 23.2 7.7 66 2-67 96-175 (346)
327 KOG1920|consensus 90.9 2.5 5.3E-05 26.0 8.3 59 5-65 79-137 (1265)
328 KOG1916|consensus 90.9 0.67 1.5E-05 27.5 3.6 24 2-25 243-266 (1283)
329 COG5170 CDC55 Serine/threonine 90.3 1.5 3.3E-05 22.9 4.3 63 5-67 37-117 (460)
330 PF08450 SGL: SMP-30/Gluconola 90.0 1.3 2.9E-05 21.4 8.1 66 2-67 141-213 (246)
331 PF10168 Nup88: Nuclear pore c 89.6 2.7 5.9E-05 24.3 7.9 31 37-67 146-179 (717)
332 PF11715 Nup160: Nucleoporin N 88.8 2 4.3E-05 23.6 4.3 21 5-25 229-249 (547)
333 KOG1645|consensus 88.3 0.88 1.9E-05 24.4 2.7 37 32-68 188-225 (463)
334 KOG2315|consensus 88.2 3.1 6.8E-05 23.3 7.0 31 37-67 311-344 (566)
335 PF14655 RAB3GAP2_N: Rab3 GTPa 88.2 2.8 6E-05 22.7 6.0 36 32-67 302-337 (415)
336 PF08596 Lgl_C: Lethal giant l 87.3 3.1 6.7E-05 22.3 8.0 31 36-67 85-115 (395)
337 PRK04043 tolB translocation pr 87.0 3.2 7E-05 22.2 6.3 57 2-60 240-300 (419)
338 KOG4190|consensus 86.7 1.4 3.1E-05 24.9 3.0 59 9-67 844-906 (1034)
339 KOG2314|consensus 86.7 4.2 9E-05 23.1 4.8 55 2-57 500-557 (698)
340 PF04841 Vps16_N: Vps16, N-ter 86.5 3.5 7.6E-05 22.1 8.1 28 38-66 81-108 (410)
341 KOG1832|consensus 85.9 3.6 7.9E-05 25.0 4.3 38 30-67 1094-1131(1516)
342 PF04762 IKI3: IKI3 family; I 85.0 6.4 0.00014 23.7 7.8 62 4-66 266-332 (928)
343 KOG2314|consensus 84.5 5.6 0.00012 22.7 6.6 62 2-65 257-332 (698)
344 TIGR03300 assembly_YfgL outer 84.0 4.4 9.5E-05 21.0 7.3 60 5-67 278-338 (377)
345 KOG4649|consensus 83.6 4.5 9.8E-05 20.9 6.4 29 3-32 102-130 (354)
346 PF08553 VID27: VID27 cytoplas 83.1 7.5 0.00016 23.1 7.6 57 8-65 544-604 (794)
347 KOG1275|consensus 83.0 8.3 0.00018 23.5 7.3 59 7-65 279-340 (1118)
348 PF14727 PHTB1_N: PTHB1 N-term 82.7 5.9 0.00013 21.6 6.0 59 6-66 145-203 (418)
349 KOG1916|consensus 82.1 1.1 2.4E-05 26.8 1.5 60 5-66 194-264 (1283)
350 KOG3630|consensus 82.0 2.8 6.2E-05 25.8 3.0 29 37-65 198-226 (1405)
351 PF15390 DUF4613: Domain of un 80.6 8.8 0.00019 22.2 6.9 30 36-65 154-184 (671)
352 PF08450 SGL: SMP-30/Gluconola 79.7 5.5 0.00012 19.3 6.8 30 37-66 133-163 (246)
353 COG2706 3-carboxymuconate cycl 79.4 7.5 0.00016 20.7 7.8 66 2-67 47-119 (346)
354 PRK04043 tolB translocation pr 79.2 8 0.00017 20.9 7.6 63 2-66 195-264 (419)
355 KOG2395|consensus 79.2 9.6 0.00021 21.8 5.6 56 10-66 398-458 (644)
356 PF00930 DPPIV_N: Dipeptidyl p 79.0 7.3 0.00016 20.3 5.6 61 3-66 1-70 (353)
357 PF01436 NHL: NHL repeat; Int 78.7 1.9 4.2E-05 13.5 3.9 21 42-62 6-26 (28)
358 PF13360 PQQ_2: PQQ-like domai 78.4 5.8 0.00013 18.9 5.4 25 5-30 35-59 (238)
359 PF04841 Vps16_N: Vps16, N-ter 78.4 8.5 0.00018 20.7 8.0 46 2-48 224-270 (410)
360 COG5354 Uncharacterized protei 78.2 10 0.00022 21.4 5.3 33 35-67 272-306 (561)
361 PRK02888 nitrous-oxide reducta 76.4 13 0.00027 21.7 7.3 60 5-67 287-351 (635)
362 KOG2377|consensus 76.0 12 0.00026 21.1 4.6 46 2-47 74-122 (657)
363 PF14870 PSII_BNR: Photosynthe 75.9 9.3 0.0002 19.8 8.0 61 3-65 153-213 (302)
364 PF14761 HPS3_N: Hermansky-Pud 75.5 8.2 0.00018 19.1 6.5 47 8-55 30-77 (215)
365 PF13570 PQQ_3: PQQ-like domai 75.3 3.1 6.7E-05 14.1 3.0 20 5-24 20-39 (40)
366 TIGR02276 beta_rpt_yvtn 40-res 71.6 3.9 8.5E-05 13.6 5.3 22 4-25 1-23 (42)
367 PF02897 Peptidase_S9_N: Proly 71.4 13 0.00029 19.7 6.5 53 2-56 131-188 (414)
368 KOG4460|consensus 69.7 19 0.00042 20.8 7.2 66 2-67 111-198 (741)
369 PRK11138 outer membrane biogen 69.6 15 0.00032 19.5 7.6 59 6-66 335-393 (394)
370 COG3386 Gluconolactonase [Carb 68.8 15 0.00032 19.2 5.2 47 20-66 145-192 (307)
371 PF12341 DUF3639: Protein of u 68.6 4.4 9.5E-05 13.0 2.5 17 5-21 10-26 (27)
372 KOG2467|consensus 63.3 11 0.00024 20.6 2.3 20 48-67 340-359 (477)
373 PF10584 Proteasome_A_N: Prote 61.5 1.5 3.2E-05 13.5 -0.6 6 2-7 8-13 (23)
374 KOG3616|consensus 61.1 36 0.00079 20.9 4.2 28 39-66 16-43 (1636)
375 KOG3616|consensus 59.9 39 0.00083 20.8 4.3 22 4-25 24-45 (1636)
376 KOG1897|consensus 58.3 44 0.00095 21.0 5.9 53 13-66 845-897 (1096)
377 PF07676 PD40: WD40-like Beta 57.9 8.6 0.00019 12.7 5.5 27 38-64 9-38 (39)
378 PF03178 CPSF_A: CPSF A subuni 57.2 26 0.00056 18.0 8.3 62 5-66 138-201 (321)
379 PF12768 Rax2: Cortical protei 56.8 27 0.00058 18.1 5.0 52 14-66 14-71 (281)
380 PF08801 Nucleoporin_N: Nup133 56.0 31 0.00068 18.6 3.9 29 39-67 191-219 (422)
381 smart00564 PQQ beta-propeller 54.2 9.2 0.0002 11.9 3.6 18 8-25 8-25 (33)
382 PF12657 TFIIIC_delta: Transcr 50.7 27 0.00059 16.3 4.7 28 39-66 87-120 (173)
383 COG3391 Uncharacterized conser 50.4 39 0.00086 18.1 8.3 63 2-66 123-189 (381)
384 PF02870 Methyltransf_1N: 6-O- 48.1 20 0.00044 14.1 2.2 21 3-23 9-29 (77)
385 PF06433 Me-amine-dh_H: Methyl 45.5 50 0.0011 17.9 4.9 49 18-68 271-321 (342)
386 KOG1920|consensus 45.3 84 0.0018 20.4 5.8 61 4-65 299-363 (1265)
387 PRK13616 lipoprotein LpqB; Pro 44.9 63 0.0014 18.8 6.5 26 37-63 447-472 (591)
388 PF14583 Pectate_lyase22: Olig 42.1 61 0.0013 17.9 5.6 64 2-65 43-108 (386)
389 PF14269 Arylsulfotran_2: Aryl 41.2 55 0.0012 17.1 6.1 22 4-25 153-174 (299)
390 PF01731 Arylesterase: Arylest 39.7 34 0.00074 14.3 5.6 28 40-67 56-84 (86)
391 PHA02713 hypothetical protein; 37.5 83 0.0018 18.1 5.1 19 48-66 512-532 (557)
392 TIGR02608 delta_60_rpt delta-6 37.5 30 0.00066 13.1 3.2 18 40-57 3-20 (55)
393 KOG2727|consensus 36.2 93 0.002 19.8 3.2 39 6-46 100-138 (1244)
394 PRK14751 tetracycline resistan 34.8 24 0.00052 11.1 1.1 10 57-66 13-22 (28)
395 COG3204 Uncharacterized protei 33.2 84 0.0018 16.9 3.7 29 35-63 83-111 (316)
396 PRK10526 acyl-CoA thioesterase 32.2 65 0.0014 16.6 2.1 55 9-63 224-284 (286)
397 cd03444 Thioesterase_II_repeat 31.7 46 0.00099 14.1 1.4 51 9-59 46-102 (104)
398 PF08728 CRT10: CRT10; InterP 30.8 1.3E+02 0.0028 18.4 7.5 59 6-65 114-193 (717)
399 KOG2247|consensus 29.7 1.2E+02 0.0027 17.7 3.1 48 6-54 129-176 (615)
400 PF08309 LVIVD: LVIVD repeat; 29.5 39 0.00085 11.9 4.7 26 4-29 9-34 (42)
401 KOG0183|consensus 29.2 28 0.0006 17.5 0.6 7 2-8 11-17 (249)
402 PF05694 SBP56: 56kDa selenium 28.8 1.2E+02 0.0026 17.4 3.7 29 2-30 319-348 (461)
403 PF03022 MRJP: Major royal jel 28.7 95 0.0021 16.1 6.8 55 2-56 193-254 (287)
404 PF09142 TruB_C: tRNA Pseudour 25.4 56 0.0012 12.3 1.0 6 4-9 34-39 (56)
405 PF01011 PQQ: PQQ enzyme repea 25.3 44 0.00095 11.1 3.8 17 9-25 3-19 (38)
406 KOG1983|consensus 24.5 1.8E+02 0.004 18.6 3.2 22 46-67 243-264 (993)
407 PF14779 BBS1: Ciliary BBSome 23.8 1.2E+02 0.0027 15.8 7.0 56 7-63 196-254 (257)
408 KOG1559|consensus 23.0 1.3E+02 0.0029 15.8 2.2 23 30-52 251-273 (340)
409 COG4590 ABC-type uncharacteriz 22.9 1.7E+02 0.0038 17.1 5.6 57 7-66 329-385 (733)
410 KOG2114|consensus 22.5 2.2E+02 0.0047 18.1 7.3 49 3-51 134-185 (933)
411 TIGR02171 Fb_sc_TIGR02171 Fibr 22.4 2.2E+02 0.0048 18.2 5.6 48 2-49 357-410 (912)
412 KOG4521|consensus 21.9 1.4E+02 0.0031 19.7 2.5 19 7-25 284-302 (1480)
413 PF10214 Rrn6: RNA polymerase 21.6 2.1E+02 0.0045 17.5 8.2 22 2-23 153-175 (765)
414 PF14795 Leucyl-specific: Leuc 20.8 73 0.0016 12.1 1.7 9 57-65 47-55 (56)
415 PF14157 YmzC: YmzC-like prote 20.5 82 0.0018 12.5 3.1 18 7-24 30-47 (63)
416 COG2509 Uncharacterized FAD-de 20.2 2E+02 0.0043 16.7 3.8 29 36-64 282-310 (486)
417 PF00352 TBP: Transcription fa 20.2 89 0.0019 12.8 1.8 12 2-13 54-65 (86)
No 1
>KOG0271|consensus
Probab=99.77 E-value=3e-18 Score=83.33 Aligned_cols=65 Identities=34% Similarity=0.554 Sum_probs=61.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|+|++..+++|+-|..+++||..+ ..+..++.+|..+|.+++|+|++..+++++.+|.|++||..
T Consensus 123 fsp~g~~l~tGsGD~TvR~WD~~T-eTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpk 187 (480)
T KOG0271|consen 123 FSPTGSRLVTGSGDTTVRLWDLDT-ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPK 187 (480)
T ss_pred ecCCCceEEecCCCceEEeeccCC-CCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCC
Confidence 688999999999999999999998 78899999999999999999999999999999999999965
No 2
>KOG0272|consensus
Probab=99.71 E-value=5.5e-17 Score=79.40 Aligned_cols=65 Identities=26% Similarity=0.370 Sum_probs=61.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+-+||..+++|+.|..-++||+++ ...+-.+.+|..+|..+.|+|++.++++|+.|++++|||++
T Consensus 311 f~~DGSL~~tGGlD~~~RvWDlRt-gr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR 375 (459)
T KOG0272|consen 311 FQPDGSLAATGGLDSLGRVWDLRT-GRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR 375 (459)
T ss_pred ecCCCceeeccCccchhheeeccc-CcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeec
Confidence 567999999999999999999999 77888889999999999999999999999999999999986
No 3
>KOG0263|consensus
Probab=99.69 E-value=4e-16 Score=80.31 Aligned_cols=65 Identities=32% Similarity=0.535 Sum_probs=61.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|.||++++++|+.|..+++|+..+ +..+..+.+|..+|.+++++|+++.+++++.|+.|.+||+.
T Consensus 543 FHPNs~Y~aTGSsD~tVRlWDv~~-G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~ 607 (707)
T KOG0263|consen 543 FHPNSNYVATGSSDRTVRLWDVST-GNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA 607 (707)
T ss_pred ECCcccccccCCCCceEEEEEcCC-CcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC
Confidence 568999999999999999999988 67788999999999999999999999999999999999985
No 4
>KOG0266|consensus
Probab=99.68 E-value=1.4e-15 Score=76.37 Aligned_cols=68 Identities=34% Similarity=0.653 Sum_probs=61.5
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.++|++..+++++.|+.+++|+..........+.+|...+.+++|+|+++.+++++.|+++++||+++
T Consensus 210 ~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~ 277 (456)
T KOG0266|consen 210 AFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT 277 (456)
T ss_pred EECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC
Confidence 36889999999999999999999553567788999999999999999999999999999999999863
No 5
>KOG0271|consensus
Probab=99.67 E-value=3.8e-16 Score=76.22 Aligned_cols=67 Identities=28% Similarity=0.526 Sum_probs=62.2
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.|+||++++++++.|+.|++|+.++ ++.+..+.+|-..|..++|+.+.+++++++.|.++.+|++++
T Consensus 374 ~fSPd~r~IASaSFDkSVkLW~g~t-Gk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~t 440 (480)
T KOG0271|consen 374 SFSPDGRYIASASFDKSVKLWDGRT-GKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRT 440 (480)
T ss_pred EECCCccEEEEeecccceeeeeCCC-cchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeee
Confidence 3789999999999999999999998 677778999999999999999999999999999999999763
No 6
>KOG0291|consensus
Probab=99.65 E-value=2.2e-15 Score=78.19 Aligned_cols=65 Identities=23% Similarity=0.570 Sum_probs=61.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+|||+.+++|..|+.|++|+... +.++.++..|+..+..++|+..++.+++.+.||+++.||+.
T Consensus 358 YSpDgq~iaTG~eDgKVKvWn~~S-gfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlk 422 (893)
T KOG0291|consen 358 YSPDGQLIATGAEDGKVKVWNTQS-GFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLK 422 (893)
T ss_pred ECCCCcEEEeccCCCcEEEEeccC-ceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeec
Confidence 578999999999999999999988 78999999999999999999999999999999999999975
No 7
>KOG0279|consensus
Probab=99.63 E-value=4.5e-15 Score=70.02 Aligned_cols=65 Identities=26% Similarity=0.445 Sum_probs=60.5
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+++++++++.+++.|+.+++||... ..+...+.+|...|.+++++++++.+++++.|.++.+|+.
T Consensus 70 ~~s~dg~~alS~swD~~lrlWDl~~-g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt 134 (315)
T KOG0279|consen 70 VLSSDGNFALSASWDGTLRLWDLAT-GESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNT 134 (315)
T ss_pred EEccCCceEEeccccceEEEEEecC-CcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeee
Confidence 3678999999999999999999988 5788889999999999999999999999999999999985
No 8
>KOG0266|consensus
Probab=99.62 E-value=1.5e-14 Score=72.81 Aligned_cols=66 Identities=39% Similarity=0.747 Sum_probs=61.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
|+|+++.+++|+.|+.|++|+.+. ..+...+.+|...+..+++.++++.+++++.|+.+++||..+
T Consensus 254 f~p~g~~i~Sgs~D~tvriWd~~~-~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 254 FSPDGNLLVSGSDDGTVRIWDVRT-GECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLET 319 (456)
T ss_pred ecCCCCEEEEecCCCcEEEEeccC-CeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCC
Confidence 678889999999999999999998 788889999999999999999999999999999999999763
No 9
>KOG0263|consensus
Probab=99.61 E-value=3.5e-15 Score=76.99 Aligned_cols=66 Identities=30% Similarity=0.566 Sum_probs=61.2
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++|+|+.+++|+.|+.|++||+.. ...+..+.+|.+.+.++.|+.++..+++++.|..+++||+.
T Consensus 584 ~~Sp~Gr~LaSg~ed~~I~iWDl~~-~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 584 AFSPCGRYLASGDEDGLIKIWDLAN-GSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred EEcCCCceEeecccCCcEEEEEcCC-CcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence 3789999999999999999999987 67777888999999999999999999999999999999975
No 10
>KOG0295|consensus
Probab=99.61 E-value=1.8e-14 Score=69.93 Aligned_cols=61 Identities=31% Similarity=0.676 Sum_probs=57.3
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.+.+++.|+.|++|++.+ ..++.++.+|.++|..++++|.|++++++-.|+++++||++.
T Consensus 305 ~~l~s~SrDktIk~wdv~t-g~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~ 365 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVST-GMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKN 365 (406)
T ss_pred cEEEeecccceEEEEeccC-CeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEecc
Confidence 5899999999999999998 688889999999999999999999999999999999999863
No 11
>KOG0264|consensus
Probab=99.60 E-value=1.7e-14 Score=70.96 Aligned_cols=64 Identities=36% Similarity=0.707 Sum_probs=58.0
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 68 (68)
++..||+|+.|+.|.+||+++...+...+.+|...|..+.|+|. ...+++++.|+.+.+||+.+
T Consensus 284 ~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 284 NEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred CCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 56789999999999999999877889999999999999999996 47888999999999999753
No 12
>KOG0272|consensus
Probab=99.60 E-value=5.1e-15 Score=72.74 Aligned_cols=65 Identities=31% Similarity=0.554 Sum_probs=59.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+|..+++|+.|+.+++||++. ....+++.+|.+.|..+++.| .+..+++++.|+++++|.-.
T Consensus 353 fsPNGy~lATgs~Dnt~kVWDLR~-r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~ 418 (459)
T KOG0272|consen 353 FSPNGYHLATGSSDNTCKVWDLRM-RSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR 418 (459)
T ss_pred ECCCceEEeecCCCCcEEEeeecc-cccceecccccchhhheEecccCCeEEEEcccCcceeeecCC
Confidence 789999999999999999999987 677899999999999999999 57999999999999999643
No 13
>KOG0289|consensus
Probab=99.59 E-value=1.3e-14 Score=71.74 Aligned_cols=66 Identities=36% Similarity=0.621 Sum_probs=60.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.|||..|.+|..|+.+++|++.. ......+.+|..+|..++|+.+|.++++...|+.+.+||+|+
T Consensus 355 fHpDgLifgtgt~d~~vkiwdlks-~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRK 420 (506)
T KOG0289|consen 355 FHPDGLIFGTGTPDGVVKIWDLKS-QTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRK 420 (506)
T ss_pred EcCCceEEeccCCCceEEEEEcCC-ccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehh
Confidence 678999999999999999999987 446778889999999999999999999999999999999874
No 14
>KOG1273|consensus
Probab=99.59 E-value=1.3e-14 Score=69.71 Aligned_cols=65 Identities=20% Similarity=0.230 Sum_probs=59.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|++.|..++.|..||.+.+||+.+ ..+...+.+|..++.+++|+++++.+++++.|..+.+||+.
T Consensus 31 Fs~~G~~lAvGc~nG~vvI~D~~T-~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~ 95 (405)
T KOG1273|consen 31 FSRWGDYLAVGCANGRVVIYDFDT-FRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLL 95 (405)
T ss_pred eccCcceeeeeccCCcEEEEEccc-cchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEecc
Confidence 567889999999999999999988 56677788999999999999999999999999999999975
No 15
>PTZ00421 coronin; Provisional
Probab=99.59 E-value=6.3e-14 Score=71.12 Aligned_cols=66 Identities=21% Similarity=0.399 Sum_probs=57.5
Q ss_pred eeecC-cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDT-RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++|++ +.+++++.|+.+++|++.. ......+..|...+.+++|+|++..+++++.|+.+++||+++
T Consensus 133 f~P~~~~iLaSgs~DgtVrIWDl~t-g~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs 199 (493)
T PTZ00421 133 FHPSAMNVLASAGADMVVNVWDVER-GKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD 199 (493)
T ss_pred eCcCCCCEEEEEeCCCEEEEEECCC-CeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC
Confidence 45654 6899999999999999987 556667788999999999999999999999999999999863
No 16
>KOG0315|consensus
Probab=99.58 E-value=3.5e-14 Score=66.48 Aligned_cols=66 Identities=33% Similarity=0.641 Sum_probs=59.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++.+|++++.|..+++|+....-.......+|+..++..+|+-+++++++++.|+++++|+++
T Consensus 223 lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 223 LSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred ECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccc
Confidence 689999999999999999999987424455678899999999999999999999999999999975
No 17
>KOG0319|consensus
Probab=99.56 E-value=3.7e-14 Score=73.41 Aligned_cols=65 Identities=32% Similarity=0.514 Sum_probs=60.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+...+++|+.|...++|+.+. ......+.+|..+++++.|++..+.+++++.|.++++|.+.
T Consensus 471 ia~ndkLiAT~SqDktaKiW~le~-~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is 535 (775)
T KOG0319|consen 471 IAPNDKLIATGSQDKTAKIWDLEQ-LRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS 535 (775)
T ss_pred ecCCCceEEecccccceeeecccC-ceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec
Confidence 578899999999999999999985 67788899999999999999999999999999999999875
No 18
>KOG0279|consensus
Probab=99.56 E-value=5.2e-14 Score=66.53 Aligned_cols=66 Identities=29% Similarity=0.540 Sum_probs=58.4
Q ss_pred eeec--CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLD--TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
|+|+ ...|++++.|+.+++|++++ .+....+.+|...+..++++|++.+.++++.|+.+.+||+++
T Consensus 156 fsP~~~~p~Ivs~s~DktvKvWnl~~-~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~ 223 (315)
T KOG0279|consen 156 FSPNESNPIIVSASWDKTVKVWNLRN-CQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE 223 (315)
T ss_pred EcCCCCCcEEEEccCCceEEEEccCC-cchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccC
Confidence 5676 57899999999999999987 455667788999999999999999999999999999999863
No 19
>KOG0286|consensus
Probab=99.56 E-value=5.5e-14 Score=66.89 Aligned_cols=65 Identities=23% Similarity=0.436 Sum_probs=60.7
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++| +++.+++|+.|...++||++. ......+.+|+..|+.++|.|.+.-+++++.|++.++||++
T Consensus 194 l~p~~~ntFvSg~cD~~aklWD~R~-~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlR 259 (343)
T KOG0286|consen 194 LSPSDGNTFVSGGCDKSAKLWDVRS-GQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLR 259 (343)
T ss_pred cCCCCCCeEEecccccceeeeeccC-cceeEeecccccccceEEEccCCCeeeecCCCceeEEEeec
Confidence 456 789999999999999999998 67888999999999999999999999999999999999987
No 20
>KOG0318|consensus
Probab=99.55 E-value=1.6e-13 Score=69.24 Aligned_cols=65 Identities=25% Similarity=0.439 Sum_probs=58.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec---cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ---GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++||+..+++.+.|+.+.+|+-.+ ...+..+. +|...|..++|+|++..+++++.|.++++||+.
T Consensus 198 ysPDG~~Fat~gsDgki~iyDGkt-ge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs 265 (603)
T KOG0318|consen 198 YSPDGSRFATAGSDGKIYIYDGKT-GEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVS 265 (603)
T ss_pred ECCCCCeEEEecCCccEEEEcCCC-ccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEee
Confidence 589999999999999999999887 55566666 789999999999999999999999999999975
No 21
>KOG0284|consensus
Probab=99.55 E-value=4.3e-14 Score=69.51 Aligned_cols=67 Identities=31% Similarity=0.547 Sum_probs=59.4
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++|+.+.|++++.|+.+++|+..- ..+...+.+|...|.+++|+|..-++++++.|..+.+||.++
T Consensus 187 afSpnDskF~t~SdDg~ikiWdf~~-~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS 253 (464)
T KOG0284|consen 187 AFSPNDSKFLTCSDDGTIKIWDFRM-PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS 253 (464)
T ss_pred ccCCCCceeEEecCCCeEEEEeccC-CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC
Confidence 4788899999999999999999875 345556789999999999999988999999999999999874
No 22
>KOG0278|consensus
Probab=99.52 E-value=2.1e-13 Score=64.10 Aligned_cols=65 Identities=20% Similarity=0.392 Sum_probs=57.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.|+...++.|+.|..++.||..+ +..+..+ .+|..+|+++.|+|++...++++.||+|++|+..
T Consensus 232 L~P~k~~fVaGged~~~~kfDy~T-geEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 232 LHPKKEFFVAGGEDFKVYKFDYNT-GEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred ccCCCceEEecCcceEEEEEeccC-CceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 467888999999999999999988 5555554 8899999999999999999999999999999753
No 23
>PTZ00421 coronin; Provisional
Probab=99.52 E-value=8e-13 Score=67.23 Aligned_cols=66 Identities=30% Similarity=0.470 Sum_probs=55.7
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCC------cceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLK------TRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
++| +++.+++|+.|+.|++|++.... .++..+.+|...|..++|+|.. ..+++++.|+.+++||+.
T Consensus 83 fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~ 156 (493)
T PTZ00421 83 FNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVE 156 (493)
T ss_pred EcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECC
Confidence 456 67899999999999999986521 3456778899999999999974 789999999999999976
No 24
>KOG0316|consensus
Probab=99.51 E-value=1.7e-13 Score=63.96 Aligned_cols=66 Identities=26% Similarity=0.612 Sum_probs=60.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.+.|+..|++|+-|..+.+|+..+ ++....+.+|..+|+.++|+.+...+++++.|..+++||.++
T Consensus 67 ~s~Dnskf~s~GgDk~v~vwDV~T-Gkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS 132 (307)
T KOG0316|consen 67 LSSDNSKFASCGGDKAVQVWDVNT-GKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRS 132 (307)
T ss_pred ccccccccccCCCCceEEEEEccc-CeeeeecccccceeeEEEecCcceEEEeccccceeEEEEccc
Confidence 355777899999999999999998 778889999999999999999999999999999999999874
No 25
>KOG0283|consensus
Probab=99.51 E-value=2.2e-13 Score=70.84 Aligned_cols=62 Identities=23% Similarity=0.555 Sum_probs=53.2
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
...++|+++++|..+++|.+.. ..++ ....|.+.|.+++|+| +.+++++|+.|+.+++|++.
T Consensus 378 SKn~fLLSSSMDKTVRLWh~~~-~~CL-~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~ 440 (712)
T KOG0283|consen 378 SKNNFLLSSSMDKTVRLWHPGR-KECL-KVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSIS 440 (712)
T ss_pred ccCCeeEeccccccEEeecCCC-ccee-eEEecCCeeEEEEecccCCCcEeecccccceEEeecC
Confidence 3567999999999999999975 4444 4556999999999999 57999999999999999874
No 26
>KOG0285|consensus
Probab=99.50 E-value=3.7e-13 Score=65.72 Aligned_cols=64 Identities=30% Similarity=0.560 Sum_probs=57.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.|.-..+++|++|..+++||+++ +..+..+.+|...|..+.+.|....+++++.|+++++||++
T Consensus 244 hPTldvl~t~grDst~RvWDiRt-r~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ 307 (460)
T KOG0285|consen 244 HPTLDVLVTGGRDSTIRVWDIRT-RASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLR 307 (460)
T ss_pred cccceeEEecCCcceEEEeeecc-cceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeec
Confidence 35567899999999999999998 77888999999999999998888889999999999999975
No 27
>KOG0293|consensus
Probab=99.50 E-value=1e-13 Score=68.51 Aligned_cols=62 Identities=23% Similarity=0.494 Sum_probs=56.0
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
+..++++|++|+.|++|+... +.++....+|...|++++|+|. ...+++++.|+++++|...
T Consensus 451 ~~~fiaSGSED~kvyIWhr~s-gkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 451 NDKFIASGSEDSKVYIWHRIS-GKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred CcceEEecCCCceEEEEEccC-CceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 457899999999999999987 7889999999999999999996 4788999999999999764
No 28
>KOG0302|consensus
Probab=99.47 E-value=1.1e-12 Score=64.30 Aligned_cols=64 Identities=33% Similarity=0.659 Sum_probs=54.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCC-CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNL-KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.+.|++|+.|+.|++||++.. +.+......|...|+-+.|+....++++|+.+|++.+||+++
T Consensus 269 E~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~ 333 (440)
T KOG0302|consen 269 EDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQ 333 (440)
T ss_pred cCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhh
Confidence 4578999999999999999863 334444578888999999999877999999999999999874
No 29
>KOG0282|consensus
Probab=99.47 E-value=5.8e-14 Score=69.96 Aligned_cols=67 Identities=22% Similarity=0.460 Sum_probs=60.7
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++| .+.+++++++|+.|++|+....+.++.++.+|..+|..++|++++..+++++.|+++++||..+
T Consensus 222 ~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtET 289 (503)
T KOG0282|consen 222 WFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTET 289 (503)
T ss_pred hccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeecccc
Confidence 355 6788999999999999999876788899999999999999999999999999999999999764
No 30
>KOG0265|consensus
Probab=99.47 E-value=1.5e-12 Score=62.26 Aligned_cols=67 Identities=24% Similarity=0.416 Sum_probs=58.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
|.|++..|++|+.|..|.+|+........-...+|...|..+.|.+++..+++++.|.+++.||+++
T Consensus 55 F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t 121 (338)
T KOG0265|consen 55 FHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAET 121 (338)
T ss_pred ECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence 6789999999999999999996543444566779999999999999999999999999999999863
No 31
>KOG0269|consensus
Probab=99.46 E-value=3.9e-13 Score=70.16 Aligned_cols=66 Identities=24% Similarity=0.397 Sum_probs=59.5
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++| .+..|+++...|.+.+||++....+...+.+|.++|.++.|+|+..++++|+.|+.+++|++.
T Consensus 184 fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t 250 (839)
T KOG0269|consen 184 FSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMT 250 (839)
T ss_pred eccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEecc
Confidence 344 467899999999999999987777888899999999999999999999999999999999975
No 32
>KOG0639|consensus
Probab=99.45 E-value=3.2e-13 Score=68.31 Aligned_cols=67 Identities=36% Similarity=0.659 Sum_probs=61.4
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++||.+..+++..||.|.+||+.+ ...+..+.+|..+..++..++++..+=+++.|.+++.||.++
T Consensus 516 a~spDakvcFsccsdGnI~vwDLhn-q~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlre 582 (705)
T KOG0639|consen 516 AISPDAKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLRE 582 (705)
T ss_pred hcCCccceeeeeccCCcEEEEEccc-ceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhh
Confidence 3678999999999999999999987 677889999999999999999999999999999999999863
No 33
>KOG0319|consensus
Probab=99.45 E-value=1.5e-12 Score=67.73 Aligned_cols=66 Identities=30% Similarity=0.606 Sum_probs=60.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
|+++.+.++++|.|+.+++|.+.+ ..+..++.+|+..|....|-.++..+++++.||.+++|++.+
T Consensus 513 Fs~~dq~laT~SgD~TvKIW~is~-fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt 578 (775)
T KOG0319|consen 513 FSKNDQLLATCSGDKTVKIWSIST-FSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKT 578 (775)
T ss_pred eccccceeEeccCCceEEEEEecc-ceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccc
Confidence 567888999999999999999988 688999999999999999999999999999999999999764
No 34
>KOG0276|consensus
Probab=99.44 E-value=9.5e-13 Score=67.87 Aligned_cols=66 Identities=26% Similarity=0.430 Sum_probs=57.9
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.| |.+.+++++.|+.+++|.+.. ..+..++.+|..+|+++.+-+. ..+++++..|.++++||+++
T Consensus 148 fnPkD~ntFaS~sLDrTVKVWslgs-~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt 216 (794)
T KOG0276|consen 148 FNPKDPNTFASASLDRTVKVWSLGS-PHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT 216 (794)
T ss_pred ecCCCccceeeeeccccEEEEEcCC-CCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch
Confidence 456 568999999999999999987 5678889999999999999774 47899999999999999874
No 35
>KOG2394|consensus
Probab=99.43 E-value=3.6e-13 Score=68.25 Aligned_cols=66 Identities=18% Similarity=0.290 Sum_probs=57.4
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++|++++++.+.|+.+++++..+ ..........-....+++|+|+++++++++.|..+.||.+.
T Consensus 297 ~FS~DG~~LA~VSqDGfLRvF~fdt-~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~ 362 (636)
T KOG2394|consen 297 AFSPDGKYLATVSQDGFLRIFDFDT-QELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE 362 (636)
T ss_pred eEcCCCceEEEEecCceEEEeeccH-HHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEec
Confidence 4789999999999999999999987 34455566677788999999999999999999999999864
No 36
>PTZ00420 coronin; Provisional
Probab=99.43 E-value=9.8e-12 Score=64.21 Aligned_cols=67 Identities=24% Similarity=0.498 Sum_probs=53.4
Q ss_pred eeec-CcEEEEeeCCCCEEEeecCCCC-------cceEEeccCCCCEEEEEEcCCCCE-EEEEeCCCCEEEEeCCC
Q psy11876 2 IFLD-TRVFATCSDDTTIALWDARNLK-------TRVRTLQGHSNWVKNIEFSSKDNL-LVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~-~~~~~~~~~~~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 68 (68)
++|+ ++.+++|+.|+.+++|++.... .+...+.+|...|.+++|+|.+.. +++++.|+.+++||+++
T Consensus 82 fsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~t 157 (568)
T PTZ00420 82 FNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIEN 157 (568)
T ss_pred EcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCC
Confidence 4564 6899999999999999986521 123456788899999999998754 57889999999999863
No 37
>KOG0273|consensus
Probab=99.43 E-value=3.3e-12 Score=63.98 Aligned_cols=61 Identities=28% Similarity=0.542 Sum_probs=56.7
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..+++++.|+.+++|+... ..++..+..|+.+|.+++++|+++++++|+.|+.+.+|+.+
T Consensus 422 ~~~l~sas~dstV~lwdv~~-gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~ 482 (524)
T KOG0273|consen 422 NLMLASASFDSTVKLWDVES-GVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK 482 (524)
T ss_pred CceEEEeecCCeEEEEEccC-CceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence 45789999999999999988 78888998999999999999999999999999999999865
No 38
>KOG0282|consensus
Probab=99.42 E-value=1.2e-12 Score=65.48 Aligned_cols=63 Identities=24% Similarity=0.490 Sum_probs=57.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~ 65 (68)
+|||++.+++|+.+|.+.+|+.++ ......+.+|...+..+.|+|. ...+++++-+|.|.+|+
T Consensus 440 fSpDG~~l~SGdsdG~v~~wdwkt-~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 440 FSPDGRTLCSGDSDGKVNFWDWKT-TKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EcCCCCeEEeecCCccEEEeechh-hhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 789999999999999999999988 5667788889888999999996 47899999999999996
No 39
>KOG0313|consensus
Probab=99.41 E-value=1.4e-12 Score=63.83 Aligned_cols=66 Identities=30% Similarity=0.627 Sum_probs=56.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCC--CcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNL--KTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
.+....+++|+.|..+++||.++. ......+.+|.+.|..+.|+|.+ .++++++.|+++++||+|+
T Consensus 309 ~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS 377 (423)
T KOG0313|consen 309 SPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS 377 (423)
T ss_pred ccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEecc
Confidence 345678999999999999999874 23456678999999999999964 7889999999999999874
No 40
>KOG0315|consensus
Probab=99.41 E-value=4.4e-12 Score=59.67 Aligned_cols=63 Identities=27% Similarity=0.479 Sum_probs=53.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
-.+++..++|+.||.+++|+++. ......+ .+..+|..+..+|....++++..+|.|++||+.
T Consensus 92 ~~dgrWMyTgseDgt~kIWdlR~-~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~ 154 (311)
T KOG0315|consen 92 QCDGRWMYTGSEDGTVKIWDLRS-LSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLG 154 (311)
T ss_pred eecCeEEEecCCCceEEEEeccC-cccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEcc
Confidence 34788999999999999999987 3333333 466899999999999999999999999999975
No 41
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.39 E-value=1.6e-11 Score=65.36 Aligned_cols=62 Identities=27% Similarity=0.480 Sum_probs=54.7
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.+++++.|+.+++|+... ......+.+|...|.+++|+| ++..+++++.|+.+++||++
T Consensus 544 ~~~~las~~~Dg~v~lWd~~~-~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~ 606 (793)
T PLN00181 544 IKSQVASSNFEGVVQVWDVAR-SQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 606 (793)
T ss_pred CCCEEEEEeCCCeEEEEECCC-CeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECC
Confidence 467899999999999999987 556667888999999999997 67899999999999999976
No 42
>KOG0285|consensus
Probab=99.39 E-value=5.5e-12 Score=61.80 Aligned_cols=65 Identities=32% Similarity=0.497 Sum_probs=59.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.|...+|++|+.|+.+++||+.+ +....+..+|...+..+++++...++++++.|+++..||+.
T Consensus 159 vdP~n~wf~tgs~DrtikIwDlat-g~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 159 VDPGNEWFATGSADRTIKIWDLAT-GQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred eCCCceeEEecCCCceeEEEEccc-CeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEech
Confidence 346678999999999999999988 67777888999999999999999999999999999999975
No 43
>PTZ00420 coronin; Provisional
Probab=99.39 E-value=1.9e-11 Score=63.19 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=51.8
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++|++. .+++++.|+.+++|++.. ......+. +...+.+++|++++.++++++.|+.+++||+++
T Consensus 133 f~P~g~~iLaSgS~DgtIrIWDl~t-g~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 133 WNPMNYYIMCSSGFDSFVNIWDIEN-EKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred ECCCCCeEEEEEeCCCeEEEEECCC-CcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCC
Confidence 456554 467899999999999987 33344443 456789999999999999999999999999874
No 44
>KOG0322|consensus
Probab=99.37 E-value=2.3e-12 Score=60.94 Aligned_cols=64 Identities=28% Similarity=0.393 Sum_probs=58.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+-||+..+++++.|+.+++|..++ ..+.....-|...+.+++|+|+...++.++.|.+|.+|++
T Consensus 259 IRpD~KIlATAGWD~RiRVyswrt-l~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 259 IRPDGKILATAGWDHRIRVYSWRT-LNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EccCCcEEeecccCCcEEEEEecc-CCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 457899999999999999999988 6777777778999999999999889999999999999986
No 45
>KOG0647|consensus
Probab=99.36 E-value=1.2e-11 Score=59.40 Aligned_cols=67 Identities=22% Similarity=0.380 Sum_probs=55.2
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcce-EEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRV-RTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
|+| ...++++++.|+.|++|+.+..+... .....+..++.+++|+.++..+++++-|+.+++||+.+
T Consensus 35 FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 35 FSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred eccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence 667 56788899999999999997632222 33456888999999999999999999999999999863
No 46
>KOG0292|consensus
Probab=99.36 E-value=9.3e-12 Score=66.48 Aligned_cols=63 Identities=29% Similarity=0.628 Sum_probs=58.2
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.-..|.++|.|..|++|++.+ +.++....+|...|-+.+|+|...++++++.|.++++||+.
T Consensus 103 heyPWIlSASDDQTIrIWNwqs-r~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 103 HEYPWILSASDDQTIRIWNWQS-RKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDIS 165 (1202)
T ss_pred CCCceEEEccCCCeEEEEeccC-CceEEEEecCceEEEeeccCCccceEEEecccceEEEEeec
Confidence 3557899999999999999998 78899999999999999999988899999999999999975
No 47
>KOG0286|consensus
Probab=99.36 E-value=1.9e-11 Score=58.56 Aligned_cols=66 Identities=33% Similarity=0.558 Sum_probs=59.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.|.+.+.|++++-|....+||+++ ......+.+|...|.++.++| +++.+++++-|+..++||++.
T Consensus 152 ~f~dD~~ilT~SGD~TCalWDie~-g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~ 218 (343)
T KOG0286|consen 152 RFLDDNHILTGSGDMTCALWDIET-GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS 218 (343)
T ss_pred EEcCCCceEecCCCceEEEEEccc-ceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccC
Confidence 356778899999999999999998 677888999999999999999 789999999999999999873
No 48
>KOG0277|consensus
Probab=99.36 E-value=1.3e-11 Score=58.20 Aligned_cols=66 Identities=29% Similarity=0.520 Sum_probs=55.8
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++| ..+.+++++.|+.+++|+++..++... +..|..++.+..|+. +.+.+++++.|+.++.||+++
T Consensus 155 ~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~ 222 (311)
T KOG0277|consen 155 FSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRN 222 (311)
T ss_pred cCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhh
Confidence 345 468999999999999999987555444 888998999999987 678999999999999999873
No 49
>KOG0264|consensus
Probab=99.35 E-value=9.8e-12 Score=61.61 Aligned_cols=64 Identities=23% Similarity=0.552 Sum_probs=54.8
Q ss_pred cCcEEEEeeCCCCEEEeecCC-CCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARN-LKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+...|++++.|+.+.+||.+. ...+.....+|..++++++|+| .+..+++++.|+++.+||+|+
T Consensus 239 h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRn 304 (422)
T KOG0264|consen 239 HEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRN 304 (422)
T ss_pred chhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechh
Confidence 456789999999999999984 2455666778999999999999 468889999999999999874
No 50
>KOG0265|consensus
Probab=99.34 E-value=9.6e-12 Score=59.58 Aligned_cols=64 Identities=30% Similarity=0.640 Sum_probs=54.7
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
..|++.+++++.|..++.||.++ +........|..-++.+.-+..+ .++.+++.|+++++||++
T Consensus 99 ~~d~s~i~S~gtDk~v~~wD~~t-G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 99 MRDGSHILSCGTDKTVRGWDAET-GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred ccCCCEEEEecCCceEEEEeccc-ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 46889999999999999999998 77788889999888888744444 567788899999999987
No 51
>KOG0273|consensus
Probab=99.34 E-value=3.6e-11 Score=60.40 Aligned_cols=62 Identities=26% Similarity=0.472 Sum_probs=56.4
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+...|++++.|+.++++.+.. ..|..++.+|.++|..+.|.|.+.++++++.|+++++|.+.
T Consensus 328 ~~~~F~ts~td~~i~V~kv~~-~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~ 389 (524)
T KOG0273|consen 328 SNDEFATSSTDGCIHVCKVGE-DRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMG 389 (524)
T ss_pred cCceEeecCCCceEEEEEecC-CCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecC
Confidence 445789999999999999977 78899999999999999999999999999999999999854
No 52
>KOG0284|consensus
Probab=99.32 E-value=9.6e-12 Score=61.54 Aligned_cols=63 Identities=33% Similarity=0.522 Sum_probs=58.4
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|....+++++.|+.|++||.++ ..++.....|...|..+.|+++++++++++.|..++++|++
T Consensus 232 P~kgLiasgskDnlVKlWDprS-g~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR 294 (464)
T KOG0284|consen 232 PTKGLIASGSKDNLVKLWDPRS-GSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR 294 (464)
T ss_pred CccceeEEccCCceeEeecCCC-cchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehh
Confidence 4567899999999999999998 78888889999999999999999999999999999999986
No 53
>KOG0645|consensus
Probab=99.32 E-value=6.6e-11 Score=56.23 Aligned_cols=66 Identities=33% Similarity=0.520 Sum_probs=57.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC-CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL-KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+|.++.+++++.|..+.+|.-... -.....+.+|+++|.+++|++.+.++++|+.|..+=+|...
T Consensus 69 wsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~d 135 (312)
T KOG0645|consen 69 WSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEID 135 (312)
T ss_pred ecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEec
Confidence 5789999999999999999987532 24577789999999999999999999999999999999753
No 54
>KOG0310|consensus
Probab=99.32 E-value=3e-11 Score=60.62 Aligned_cols=62 Identities=27% Similarity=0.615 Sum_probs=53.9
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
++..+.+|+.|+.+++|++.+ ......+.+|+..|.+.+++|.. ..+++|+.|+++++||.+
T Consensus 122 d~t~l~s~sDd~v~k~~d~s~-a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR 184 (487)
T KOG0310|consen 122 DNTMLVSGSDDKVVKYWDLST-AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTR 184 (487)
T ss_pred CCeEEEecCCCceEEEEEcCC-cEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence 567889999999999999987 34466788999999999999964 688999999999999976
No 55
>KOG0276|consensus
Probab=99.32 E-value=6e-12 Score=65.07 Aligned_cols=62 Identities=31% Similarity=0.583 Sum_probs=56.7
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|...+++|+.|..+++||.++ +.++.++.+|..-|..+.++|.-..+++|+.||++++|.-.
T Consensus 196 dkpylIsgaDD~tiKvWDyQt-k~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~ 257 (794)
T KOG0276|consen 196 DKPYLISGADDLTIKVWDYQT-KSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSK 257 (794)
T ss_pred CcceEEecCCCceEEEeecch-HHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCc
Confidence 446899999999999999998 78898999999999999999999999999999999999743
No 56
>KOG0275|consensus
Probab=99.32 E-value=3.3e-12 Score=62.18 Aligned_cols=66 Identities=24% Similarity=0.339 Sum_probs=53.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCc-------ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKT-------RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|+||++++++|+.||.+.+|+..+.+. ..-.+.-+...|.++.|+.+...+++++.||.|.+|.++
T Consensus 221 FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~ 293 (508)
T KOG0275|consen 221 FSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE 293 (508)
T ss_pred eCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence 789999999999999999999876211 111122356789999999999999999999999999865
No 57
>KOG0772|consensus
Probab=99.31 E-value=7.5e-12 Score=63.54 Aligned_cols=67 Identities=25% Similarity=0.498 Sum_probs=54.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC--CcceEEeccCCC--CEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL--KTRVRTLQGHSN--WVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++++..|++|..||.|.+|+.... ......-.+|.. .+.++.|+++++.+++-+.|.++++||+++
T Consensus 325 ~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 325 WNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ 395 (641)
T ss_pred cCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence 5678999999999999999997542 112333445665 789999999999999999999999999874
No 58
>KOG0299|consensus
Probab=99.31 E-value=1.3e-11 Score=61.58 Aligned_cols=66 Identities=26% Similarity=0.497 Sum_probs=59.9
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++|++++++|..|..+.+|+.++ ...+..+.+|...|.+++|..+...+.+++.|+.+.+|++.
T Consensus 209 avS~Dgkylatgg~d~~v~Iw~~~t-~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~ 274 (479)
T KOG0299|consen 209 AVSSDGKYLATGGRDRHVQIWDCDT-LEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSID 274 (479)
T ss_pred EEcCCCcEEEecCCCceEEEecCcc-cchhhcccccccceeeeeeecCccceeeeecCCceEEEehh
Confidence 4689999999999999999999998 67777889999999999998888888999999999999864
No 59
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.31 E-value=4.8e-11 Score=41.64 Aligned_cols=37 Identities=41% Similarity=0.750 Sum_probs=34.3
Q ss_pred ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 29 RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+...+.+|...+.+++|+|++..+++++.|+.+++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 4567889999999999999999999999999999997
No 60
>KOG1034|consensus
Probab=99.31 E-value=6.7e-11 Score=57.46 Aligned_cols=61 Identities=25% Similarity=0.580 Sum_probs=53.8
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEE---eccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRT---LQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+++++++.|..+++|++++ ..++.. ..+|...|.++.|++++..+++++.|..+++|++.
T Consensus 148 ~qlvls~SkD~svRlwnI~~-~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 148 PQLVLSASKDHSVRLWNIQT-DVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred CcEEEEecCCceEEEEeccC-CeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 47899999999999999988 555544 45789999999999999999999999999999875
No 61
>KOG1332|consensus
Probab=99.30 E-value=1e-10 Score=55.04 Aligned_cols=62 Identities=27% Similarity=0.551 Sum_probs=54.0
Q ss_pred CcEEEEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcC--CCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSS--KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..|++++.|+.|+++..+.+. .....+.+|+.+++.++|.. .+..+++++.|+++.+|...
T Consensus 23 gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~ 88 (299)
T KOG1332|consen 23 GKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEE 88 (299)
T ss_pred cceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecC
Confidence 5689999999999999998643 45677899999999999965 58999999999999999754
No 62
>KOG0281|consensus
Probab=99.29 E-value=5.9e-12 Score=61.67 Aligned_cols=62 Identities=24% Similarity=0.560 Sum_probs=50.5
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.|...+++|..|+.+++||... ..+.....+|++.|.++++ +.+.+++|+.|.++++||.++
T Consensus 205 YDD~kiVSGlrDnTikiWD~n~-~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~t 266 (499)
T KOG0281|consen 205 YDDEKIVSGLRDNTIKIWDKNS-LECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNT 266 (499)
T ss_pred ecchhhhcccccCceEEecccc-HHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccC
Confidence 3556788999999999999877 5677778889988888877 556888999999999998753
No 63
>KOG0318|consensus
Probab=99.29 E-value=4.4e-11 Score=60.81 Aligned_cols=66 Identities=14% Similarity=0.288 Sum_probs=56.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++||+.+|+++...+.+.+|+............-|...|.+++|+|++.++++++.|-.+.+|++.
T Consensus 495 ySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~ 560 (603)
T KOG0318|consen 495 YSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVK 560 (603)
T ss_pred ECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence 688999999999999999999977322232334488999999999999999999999999999875
No 64
>KOG0292|consensus
Probab=99.29 E-value=1.9e-11 Score=65.38 Aligned_cols=65 Identities=23% Similarity=0.479 Sum_probs=59.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|.|.+.+|++|+.|..|++|+... ++++.+..+|-..|..+.|++.-.++++++.|.+|++|+.+
T Consensus 59 FH~~qplFVSGGDDykIkVWnYk~-rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwq 123 (1202)
T KOG0292|consen 59 FHPTQPLFVSGGDDYKIKVWNYKT-RRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQ 123 (1202)
T ss_pred ecCCCCeEEecCCccEEEEEeccc-ceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEecc
Confidence 556788999999999999999988 78888999999999999999999999999999999999865
No 65
>KOG0293|consensus
Probab=99.28 E-value=4.3e-11 Score=59.62 Aligned_cols=66 Identities=30% Similarity=0.490 Sum_probs=57.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|+++|..+|+++.|...-+|...... ....++.+|..+|..+.|+|+.+++++|+.+.-+.+||..
T Consensus 232 FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~ 299 (519)
T KOG0293|consen 232 FSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVD 299 (519)
T ss_pred EcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCC
Confidence 67899999999999999999875421 2355778999999999999999999999999999999975
No 66
>KOG0302|consensus
Probab=99.28 E-value=5.9e-11 Score=58.45 Aligned_cols=61 Identities=30% Similarity=0.610 Sum_probs=52.8
Q ss_pred cEEEEeeCCCCEEEeecCCC--CcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNL--KTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
.+|++|+.||.+++|+++.. ..++..+.-|..+|.++.|+|. ...++.++.|.++.+||+.
T Consensus 315 ~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 315 PLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred ceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 47999999999999999852 4567788889999999999995 4778888899999999974
No 67
>KOG0308|consensus
Probab=99.27 E-value=6.9e-11 Score=61.31 Aligned_cols=64 Identities=23% Similarity=0.514 Sum_probs=56.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+++..|++|+.++.+++|+.++ ...+-.+.+|+.-|..+..+.+++.+++++.|++|++||+.
T Consensus 180 N~t~t~ivsGgtek~lr~wDprt-~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg 243 (735)
T KOG0308|consen 180 NQTGTIIVSGGTEKDLRLWDPRT-CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG 243 (735)
T ss_pred CCcceEEEecCcccceEEecccc-ccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc
Confidence 45567899999999999999998 45566777999999999999999999999999999999975
No 68
>KOG0973|consensus
Probab=99.27 E-value=5.8e-11 Score=63.66 Aligned_cols=67 Identities=28% Similarity=0.551 Sum_probs=57.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCC------CC-----------cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARN------LK-----------TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
+++||+.+|+|+.|..+.+|+... .+ +....+.+|...|..+.|+|++.++++++.|+++.+|
T Consensus 77 ~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiw 156 (942)
T KOG0973|consen 77 FSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIW 156 (942)
T ss_pred ECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEE
Confidence 678999999999999999998762 11 2455678899999999999999999999999999999
Q ss_pred eCCC
Q psy11876 65 DINK 68 (68)
Q Consensus 65 ~~~~ 68 (68)
+.++
T Consensus 157 n~~t 160 (942)
T KOG0973|consen 157 NAKT 160 (942)
T ss_pred cccc
Confidence 8753
No 69
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.26 E-value=3.5e-10 Score=52.83 Aligned_cols=65 Identities=32% Similarity=0.553 Sum_probs=55.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.+++++.++.+.+|+... .........+...+..+.|.+++..+++++.++.+.+|++.
T Consensus 17 ~~~~~~~l~~~~~~g~i~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 17 FSPDGKLLATGSGDGTIKVWDLET-GELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred EcCCCCEEEEeecCcEEEEEEeeC-CCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 457788999999999999999976 44555667788888899999998899999999999999975
No 70
>KOG0277|consensus
Probab=99.26 E-value=1.5e-10 Score=54.79 Aligned_cols=61 Identities=38% Similarity=0.677 Sum_probs=53.5
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
+..+++++.|+.|++|+..- ...+.++.+|...|...+|+|. ...+++++.|+++++||++
T Consensus 117 r~~~ltsSWD~TiKLW~~~r-~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr 178 (311)
T KOG0277|consen 117 RRIFLTSSWDGTIKLWDPNR-PNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVR 178 (311)
T ss_pred ceeEEeeccCCceEeecCCC-CcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEec
Confidence 45678889999999999876 5667789999999999999995 6889999999999999976
No 71
>KOG0291|consensus
Probab=99.26 E-value=9e-11 Score=61.82 Aligned_cols=63 Identities=21% Similarity=0.436 Sum_probs=54.5
Q ss_pred ecCcEEEEeeCC-CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDD-TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..|..++.|+.. |.+.+|+++. ..-+...++|...+.+++++|+++.+++|+.|+++++||.+
T Consensus 317 ~tGDWiA~g~~klgQLlVweWqs-EsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~ 380 (893)
T KOG0291|consen 317 STGDWIAFGCSKLGQLLVWEWQS-ESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQ 380 (893)
T ss_pred ccCCEEEEcCCccceEEEEEeec-cceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEecc
Confidence 347788887766 7889999987 45567788999999999999999999999999999999975
No 72
>KOG0296|consensus
Probab=99.26 E-value=1.2e-10 Score=57.09 Aligned_cols=62 Identities=23% Similarity=0.375 Sum_probs=57.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+...++++..+|.++.|+.++ ++....+.+|...|..++++|+.+++++.+.|++.++|+..
T Consensus 337 ~t~~l~t~c~~g~v~~wDaRt-G~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 337 NTDYLLTACANGKVRQWDART-GQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred CcchheeeccCceEEeeeccc-cceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 456788999999999999999 78899999999999999999999999999999999999875
No 73
>KOG0645|consensus
Probab=99.26 E-value=1.2e-10 Score=55.39 Aligned_cols=65 Identities=23% Similarity=0.424 Sum_probs=56.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCC--CCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARN--LKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+.+|++|+++++|+.+.+|.... .-.+...+..|...|..+.|+|...++++++.|.+|++|.-
T Consensus 113 ws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~ 179 (312)
T KOG0645|consen 113 WSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRD 179 (312)
T ss_pred EcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEee
Confidence 567899999999999999999873 22356667889999999999998889999999999999964
No 74
>KOG0296|consensus
Probab=99.26 E-value=1.9e-10 Score=56.43 Aligned_cols=66 Identities=24% Similarity=0.424 Sum_probs=59.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.|+.+.+++|+.|-.-.+|++.+ ......+.+|...|.++.|+.++.++++++.+|.+++|+..+
T Consensus 72 l~P~~~l~aTGGgDD~AflW~~~~-ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st 137 (399)
T KOG0296|consen 72 LHPNNNLVATGGGDDLAFLWDIST-GEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST 137 (399)
T ss_pred eCCCCceEEecCCCceEEEEEccC-CcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc
Confidence 457889999999999999999988 456778899999999999999999999999999999998753
No 75
>KOG4283|consensus
Probab=99.26 E-value=1.4e-10 Score=56.01 Aligned_cols=60 Identities=32% Similarity=0.504 Sum_probs=53.4
Q ss_pred EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 8 VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
.+++|..+..|+++|+.. +.....+.+|...|.++.|+|.. -.+++++-|+.+++||++.
T Consensus 160 LiA~gtr~~~VrLCDi~S-Gs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRr 220 (397)
T KOG4283|consen 160 LIAAGTRDVQVRLCDIAS-GSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRR 220 (397)
T ss_pred EEEEecCCCcEEEEeccC-CcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeec
Confidence 678999999999999988 77788899999999999999976 4567899999999999873
No 76
>KOG0305|consensus
Probab=99.25 E-value=5.3e-11 Score=60.42 Aligned_cols=65 Identities=26% Similarity=0.431 Sum_probs=55.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEe--CCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAG--FDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~i~~~~~~ 67 (68)
.+++++.+++|+.|+.+.+|+... ..+...+..|...|..++|+| +..++++|+ .|+.+++|+..
T Consensus 309 ws~d~~~lASGgnDN~~~Iwd~~~-~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~ 376 (484)
T KOG0305|consen 309 WSPDGNQLASGGNDNVVFIWDGLS-PEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN 376 (484)
T ss_pred ECCCCCeeccCCCccceEeccCCC-ccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence 367899999999999999999966 567888899999999999999 456777765 47999999864
No 77
>KOG0295|consensus
Probab=99.25 E-value=1.1e-10 Score=57.24 Aligned_cols=65 Identities=23% Similarity=0.543 Sum_probs=60.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+-|.+..+++++.|..++.|+..+ +.+++++.+|...+.-++...++.++++++.|.++++|-..
T Consensus 201 f~P~gd~ilS~srD~tik~We~~t-g~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~ 265 (406)
T KOG0295|consen 201 FLPLGDHILSCSRDNTIKAWECDT-GYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVA 265 (406)
T ss_pred EEecCCeeeecccccceeEEeccc-ceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEec
Confidence 557889999999999999999998 78999999999999999999999999999999999999643
No 78
>KOG1007|consensus
Probab=99.25 E-value=8.9e-11 Score=56.43 Aligned_cols=64 Identities=30% Similarity=0.619 Sum_probs=55.5
Q ss_pred eecC-cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeC
Q psy11876 3 FLDT-RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 66 (68)
.|+. ..+++|+.|+.+++||.+....++....+|..+++++.++|.. +++.+++.|..+.+|..
T Consensus 223 Npnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 223 NPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred CCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 4554 4689999999999999987678888899999999999999964 78889999999999864
No 79
>KOG0270|consensus
Probab=99.25 E-value=9.8e-11 Score=58.41 Aligned_cols=61 Identities=25% Similarity=0.476 Sum_probs=55.2
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.+++|+.|..|.+|++.. ..+...+..|...|.++.|+|. ...+++|+.|+++.+.|.|
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~-g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R 317 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDT-GKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR 317 (463)
T ss_pred ceeEEecCCCceEEEEEcCC-CCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence 36899999999999999988 7788888889999999999995 6888999999999999987
No 80
>KOG0316|consensus
Probab=99.25 E-value=6.1e-11 Score=55.67 Aligned_cols=65 Identities=28% Similarity=0.547 Sum_probs=58.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.-+|++..+++.|..+++|+... ...+.++.+|..+|...+.+.++..+++|+.|..+.+||+.+
T Consensus 26 N~dGnY~ltcGsdrtvrLWNp~r-g~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~T 90 (307)
T KOG0316|consen 26 NVDGNYCLTCGSDRTVRLWNPLR-GALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNT 90 (307)
T ss_pred ccCCCEEEEcCCCceEEeecccc-cceeeeecCCCceeeeccccccccccccCCCCceEEEEEccc
Confidence 44789999999999999999977 678889999999999999999999999999999999999764
No 81
>KOG0288|consensus
Probab=99.25 E-value=5.5e-11 Score=58.99 Aligned_cols=64 Identities=17% Similarity=0.305 Sum_probs=52.7
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEec-cCCC-CEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ-GHSN-WVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+|+|++.++++|+.||.+++|+..+ .+...... .+.. .+.++.|+|-+..+++++.+..+.+|.
T Consensus 394 vfSpd~~YvaAGS~dgsv~iW~v~t-gKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 394 VFSPDGSYVAAGSADGSVYIWSVFT-GKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EECCCCceeeeccCCCcEEEEEccC-ceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 4789999999999999999999987 44433333 3333 689999999999999999999999984
No 82
>KOG1445|consensus
Probab=99.24 E-value=1.5e-11 Score=64.11 Aligned_cols=61 Identities=30% Similarity=0.464 Sum_probs=54.3
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
..+++++.|..|++||+.+ ......+.+|...|..++|+|+++.+++.+.|+++++|..++
T Consensus 691 dvLa~asyd~Ti~lWDl~~-~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs 751 (1012)
T KOG1445|consen 691 DVLAVASYDSTIELWDLAN-AKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRS 751 (1012)
T ss_pred hHhhhhhccceeeeeehhh-hhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCC
Confidence 4578899999999999987 555667889999999999999999999999999999998653
No 83
>KOG0281|consensus
Probab=99.24 E-value=4.2e-11 Score=58.82 Aligned_cols=60 Identities=33% Similarity=0.646 Sum_probs=45.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..++++++.|..+++|++.+ ...+.++.+|..++.++++ .++++++|+.|.+|++||++
T Consensus 329 d~kyIVsASgDRTikvW~~st-~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~ 388 (499)
T KOG0281|consen 329 DDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE 388 (499)
T ss_pred ccceEEEecCCceEEEEeccc-eeeehhhhcccccceehhc--cCeEEEecCCCceEEEEecc
Confidence 456788888888888888877 5566677778877777766 66778888888888888764
No 84
>KOG0771|consensus
Probab=99.24 E-value=3.8e-11 Score=59.24 Aligned_cols=64 Identities=27% Similarity=0.424 Sum_probs=55.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++.++..++++..||.+++|+... .........|...|..+.|+|++..+++.+.+ ..++|+.+
T Consensus 152 f~~~gs~latgg~dg~lRv~~~Ps-~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~ 215 (398)
T KOG0771|consen 152 FNGDGSKLATGGTDGTLRVWEWPS-MLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVN 215 (398)
T ss_pred EcCCCCEeeeccccceEEEEecCc-chhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEec
Confidence 567889999999999999999766 44555566788899999999999999999988 99999875
No 85
>KOG0278|consensus
Probab=99.23 E-value=5.7e-12 Score=59.45 Aligned_cols=67 Identities=15% Similarity=0.366 Sum_probs=58.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
|+.|.+.+++|+++..+++++++....+...+.+|...|..+.|....+.+++...|+++++||.++
T Consensus 108 f~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rT 174 (334)
T KOG0278|consen 108 FSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRT 174 (334)
T ss_pred ecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEecc
Confidence 5668889999999999999999876677778889999999999998777788878999999999874
No 86
>KOG1446|consensus
Probab=99.23 E-value=4e-10 Score=54.21 Aligned_cols=40 Identities=25% Similarity=0.601 Sum_probs=36.2
Q ss_pred cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 28 TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+..+.+|...|..++.+|.+..+++++.|+++++||++
T Consensus 91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR 130 (311)
T KOG1446|consen 91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLR 130 (311)
T ss_pred ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEec
Confidence 4566778999999999999998999999999999999987
No 87
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.23 E-value=5e-10 Score=59.86 Aligned_cols=63 Identities=30% Similarity=0.460 Sum_probs=53.2
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++..+++|+.|+.+++|+.+....+.....+|...+..+.|. ++..+++++.|+.+++||++
T Consensus 628 ~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 628 ESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLS 690 (793)
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence 4678999999999999999976444566677899999999996 56788999999999999975
No 88
>KOG0640|consensus
Probab=99.22 E-value=1e-10 Score=56.80 Aligned_cols=68 Identities=25% Similarity=0.438 Sum_probs=57.6
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCC------C-----------CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEE
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARN------L-----------KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYT 63 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 63 (68)
.+++||+++++|+.|-.|++.+.+. . ...+.++..|..+|..+.|+|....+++++.|+++++
T Consensus 119 afs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKl 198 (430)
T KOG0640|consen 119 AFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKL 198 (430)
T ss_pred eeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEEE
Confidence 4789999999999999999998751 0 1235567788999999999999999999999999999
Q ss_pred EeCCC
Q psy11876 64 WDINK 68 (68)
Q Consensus 64 ~~~~~ 68 (68)
+|+.+
T Consensus 199 FDfsK 203 (430)
T KOG0640|consen 199 FDFSK 203 (430)
T ss_pred Eeccc
Confidence 99863
No 89
>KOG0306|consensus
Probab=99.21 E-value=7.3e-11 Score=62.11 Aligned_cols=64 Identities=27% Similarity=0.493 Sum_probs=58.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++||+..+++|+.|..|++|-+.. +-+-..+.+|...|.++.|.|+...+.+++.|+.++.||-
T Consensus 558 IS~DSklivTgSADKnVKiWGLdF-GDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg 621 (888)
T KOG0306|consen 558 ISPDSKLIVTGSADKNVKIWGLDF-GDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDG 621 (888)
T ss_pred ccCCcCeEEeccCCCceEEecccc-chhhhhhhcccCceeEEEEcccceeEEEecCcceEEeech
Confidence 578999999999999999999876 5666678899999999999999999999999999999974
No 90
>KOG2096|consensus
Probab=99.20 E-value=1.8e-10 Score=56.09 Aligned_cols=67 Identities=27% Similarity=0.396 Sum_probs=56.7
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCC-------CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNL-------KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++|+|++++++....-+++|++--. -.....+.+|...|..++|+++++..++.+.||+.++||..
T Consensus 235 avSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 235 AVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred eeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 47899999999999999999987310 12344678999999999999999999999999999999853
No 91
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.19 E-value=7.2e-10 Score=51.76 Aligned_cols=63 Identities=37% Similarity=0.611 Sum_probs=53.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+.+++..+++++.++.+.+|+... ......+..+...+..++|++++..+++++.++.+.+|+
T Consensus 227 ~~~~~~~~~~~~~~~~i~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 227 FSPDGYLLASGSEDGTIRVWDLRT-GECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EcCCCcEEEEEcCCCcEEEEEcCC-ceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 345677888888899999999976 455666667888899999999999999999999999996
No 92
>KOG0649|consensus
Probab=99.18 E-value=5.1e-10 Score=52.92 Aligned_cols=64 Identities=17% Similarity=0.331 Sum_probs=51.9
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
|..+-+..+.-|+.++.|++++ +.....+.+|++.++++........+.+++.||++++||.++
T Consensus 124 P~enSi~~AgGD~~~y~~dlE~-G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt 187 (325)
T KOG0649|consen 124 PSENSILFAGGDGVIYQVDLED-GRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKT 187 (325)
T ss_pred cCCCcEEEecCCeEEEEEEecC-CEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccc
Confidence 3333344444689999999998 778889999999999998766677899999999999999764
No 93
>KOG0647|consensus
Probab=99.18 E-value=5.6e-10 Score=53.85 Aligned_cols=64 Identities=23% Similarity=0.330 Sum_probs=54.4
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC--CEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD--NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~ 68 (68)
+-++..+++|+.|+.+++|++.. . .......|..++..++|.+.. ..+++++.|.+++.||.++
T Consensus 81 sddgskVf~g~~Dk~~k~wDL~S-~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~ 146 (347)
T KOG0647|consen 81 SDDGSKVFSGGCDKQAKLWDLAS-G-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRS 146 (347)
T ss_pred ccCCceEEeeccCCceEEEEccC-C-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCC
Confidence 44788999999999999999987 3 355667799999999998865 4889999999999999874
No 94
>KOG0643|consensus
Probab=99.18 E-value=8.9e-10 Score=52.58 Aligned_cols=65 Identities=23% Similarity=0.428 Sum_probs=58.5
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
..+|.+|.++..|....+|-..+ +..+.++.+|+..|+++...-+...+++++.|.++++||+.+
T Consensus 19 N~eGDLlFscaKD~~~~vw~s~n-GerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t 83 (327)
T KOG0643|consen 19 NREGDLLFSCAKDSTPTVWYSLN-GERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET 83 (327)
T ss_pred cCCCcEEEEecCCCCceEEEecC-CceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence 45788999999999999998866 677889999999999999988899999999999999999863
No 95
>KOG3914|consensus
Probab=99.18 E-value=2e-10 Score=56.59 Aligned_cols=67 Identities=21% Similarity=0.298 Sum_probs=53.5
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++||+++|+++..|..|++-.+......-..+.+|...|..+++-++ ..+++++.|+++++||+++
T Consensus 158 avS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~s 224 (390)
T KOG3914|consen 158 AVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITS 224 (390)
T ss_pred eecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEeccc
Confidence 468999999999999999997776533334446689999988887554 4588999999999999864
No 96
>KOG0274|consensus
Probab=99.17 E-value=6.3e-10 Score=57.50 Aligned_cols=64 Identities=30% Similarity=0.574 Sum_probs=56.0
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
..++..+++|+.|+.|++|++.. ..++..+.+|..+|.++.+... ..+.+++.|+++++||+++
T Consensus 338 ~~~~~~lvsgs~d~~v~VW~~~~-~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~ 401 (537)
T KOG0274|consen 338 QLDEPLLVSGSYDGTVKVWDPRT-GKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRT 401 (537)
T ss_pred EecCCEEEEEecCceEEEEEhhh-ceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCc
Confidence 34678999999999999999987 7888899999999999977554 7899999999999999864
No 97
>KOG1407|consensus
Probab=99.17 E-value=1.4e-10 Score=55.03 Aligned_cols=63 Identities=29% Similarity=0.326 Sum_probs=56.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+.|+|+.|++|+.|-.+.+||... ..+...+.-+..+|..+.|+.+++++++++.|..|-+=+
T Consensus 197 f~p~GryfA~GsADAlvSLWD~~E-LiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ 259 (313)
T KOG1407|consen 197 FDPDGRYFATGSADALVSLWDVDE-LICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAE 259 (313)
T ss_pred ECCCCceEeeccccceeeccChhH-hhhheeeccccCceEEEEeccCcceeeccCccceEEeEe
Confidence 678999999999999999999987 577778888899999999999999999999998876543
No 98
>KOG0306|consensus
Probab=99.17 E-value=5.6e-10 Score=58.99 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=58.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+|||+.+++.+-.|+.+++|-+.+ ........+|.-+|.++..+|++.++++|+.|..+.+|.+
T Consensus 516 ~Spdgk~LaVsLLdnTVkVyflDt-lKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGL 579 (888)
T KOG0306|consen 516 VSPDGKLLAVSLLDNTVKVYFLDT-LKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGL 579 (888)
T ss_pred EcCCCcEEEEEeccCeEEEEEecc-eeeeeeecccccceeEEeccCCcCeEEeccCCCceEEecc
Confidence 689999999999999999999987 4556677899999999999999999999999999999965
No 99
>KOG0269|consensus
Probab=99.17 E-value=2.1e-10 Score=60.49 Aligned_cols=63 Identities=24% Similarity=0.515 Sum_probs=53.9
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.+.+++|++||.|+.||++. .....++.+....+..++|+|. +..+++....|.+++||+++
T Consensus 145 ep~iliSGSQDg~vK~~DlR~-~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRq 208 (839)
T KOG0269|consen 145 EPNILISGSQDGTVKCWDLRS-KKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQ 208 (839)
T ss_pred CccEEEecCCCceEEEEeeec-ccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccC
Confidence 457899999999999999987 4455567778888999999995 68889999999999999984
No 100
>KOG0294|consensus
Probab=99.16 E-value=8.5e-10 Score=53.50 Aligned_cols=65 Identities=35% Similarity=0.504 Sum_probs=56.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEE--cCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEF--SSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.+++.+++|..|..+.+||... ..+...+.+|..+|..+.. .|.+.++++.+.||.|.+||++
T Consensus 215 ~~l~~~~L~vG~d~~~i~~~D~ds-~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~ 281 (362)
T KOG0294|consen 215 TFLDGSELLVGGDNEWISLKDTDS-DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDID 281 (362)
T ss_pred eecCCceEEEecCCceEEEeccCC-CccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcc
Confidence 355788999999999999999987 6778889999999988873 4577899999999999999975
No 101
>KOG1063|consensus
Probab=99.14 E-value=2.9e-10 Score=59.42 Aligned_cols=67 Identities=21% Similarity=0.359 Sum_probs=56.0
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCC---cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLK---TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+|+||+++|++.++|....+|...... ........|+.-|+...|+|++..+++++.|.++.+|...
T Consensus 579 ~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~ 648 (764)
T KOG1063|consen 579 AFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEP 648 (764)
T ss_pred EECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEecc
Confidence 478999999999999999999875421 1222366799999999999999999999999999999754
No 102
>KOG0283|consensus
Probab=99.13 E-value=5.9e-10 Score=58.64 Aligned_cols=64 Identities=22% Similarity=0.338 Sum_probs=53.3
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|.| |.++|++|+.|+.+++|.+.. .. +.....-..-|.++++.|+|+..+.|+.+|.+++|+.+
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d-~~-Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~ 481 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISD-KK-VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTE 481 (712)
T ss_pred ecccCCCcEeecccccceEEeecCc-Ce-eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEcc
Confidence 556 779999999999999999976 33 33444455778999999999999999999999999754
No 103
>KOG1272|consensus
Probab=99.13 E-value=1.6e-10 Score=58.24 Aligned_cols=65 Identities=20% Similarity=0.373 Sum_probs=57.2
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.|-.-.+-.|-.+|.|.+|.... ..++..+.+|..+|.++++.+++++.++.+.|+.+.+||++.
T Consensus 260 NP~NaVih~GhsnGtVSlWSP~s-kePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 260 NPYNAVIHLGHSNGTVSLWSPNS-KEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN 324 (545)
T ss_pred CCccceEEEcCCCceEEecCCCC-cchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecc
Confidence 34455788899999999999876 677778889999999999999999999999999999999873
No 104
>KOG0973|consensus
Probab=99.13 E-value=6.4e-10 Score=59.90 Aligned_cols=63 Identities=19% Similarity=0.486 Sum_probs=58.5
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+|++.++++++.|+.|-+|+..+. .....+.+|...|..+.|.|-++++++.+.|+++++|+.
T Consensus 138 sp~~~~lvS~s~DnsViiwn~~tF-~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt 200 (942)
T KOG0973|consen 138 SPDDSLLVSVSLDNSVIIWNAKTF-ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRT 200 (942)
T ss_pred CCCccEEEEecccceEEEEccccc-eeeeeeecccccccceEECCccCeeeeecCCceEEEEEc
Confidence 578999999999999999999984 667788999999999999999999999999999999974
No 105
>KOG0275|consensus
Probab=99.12 E-value=1.5e-10 Score=56.59 Aligned_cols=65 Identities=20% Similarity=0.426 Sum_probs=58.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|+.|+..+.+++.|..+++--+.. ++....+.+|...+....|.+++..+++++.|+++++|+..
T Consensus 314 FSrD~SqiLS~sfD~tvRiHGlKS-GK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~K 378 (508)
T KOG0275|consen 314 FSRDNSQILSASFDQTVRIHGLKS-GKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGK 378 (508)
T ss_pred EccCcchhhcccccceEEEecccc-chhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCc
Confidence 456888999999999999988877 67788899999999999999999999999999999999865
No 106
>KOG0310|consensus
Probab=99.12 E-value=2.2e-10 Score=57.65 Aligned_cols=66 Identities=23% Similarity=0.435 Sum_probs=56.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 68 (68)
|-.||..+++|+..|.+++++..+ +..+..+.+|+.+++...|+|+ +..+++++.|+.+++||+.+
T Consensus 76 fR~DG~LlaaGD~sG~V~vfD~k~-r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~ 142 (487)
T KOG0310|consen 76 FRSDGRLLAAGDESGHVKVFDMKS-RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST 142 (487)
T ss_pred eecCCeEEEccCCcCcEEEecccc-HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC
Confidence 345899999999999999999655 5677788899999999999996 57788899999999999763
No 107
>KOG0294|consensus
Probab=99.08 E-value=1.4e-09 Score=52.74 Aligned_cols=59 Identities=22% Similarity=0.465 Sum_probs=53.1
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+.+.+|+.||.|.+|+... =.....+.+|...|..++.+|.+++.++.+.|+.+++|++
T Consensus 98 shLlS~sdDG~i~iw~~~~-W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL 156 (362)
T KOG0294|consen 98 SHLLSGSDDGHIIIWRVGS-WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNL 156 (362)
T ss_pred hheeeecCCCcEEEEEcCC-eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehh
Confidence 3799999999999999976 3556778899999999999999999999999999999986
No 108
>KOG1539|consensus
Probab=99.08 E-value=2.3e-10 Score=60.71 Aligned_cols=61 Identities=31% Similarity=0.571 Sum_probs=54.2
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
..++.+..|-.|.++|..+ .+....+.+|.+.+..++|+|+++++++++.|++|++||+.+
T Consensus 547 ~l~a~~~ddf~I~vvD~~t-~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt 607 (910)
T KOG1539|consen 547 DLLAIALDDFSIRVVDVVT-RKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT 607 (910)
T ss_pred hhhhhhcCceeEEEEEchh-hhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccC
Confidence 4567777788999999987 677888999999999999999999999999999999999753
No 109
>KOG0303|consensus
Probab=99.07 E-value=8.4e-10 Score=54.89 Aligned_cols=60 Identities=23% Similarity=0.439 Sum_probs=52.4
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.+++++.|+.+.+|+..+ +.....+. |...|.++.|+.++.++.+.+.|..+++||.++
T Consensus 145 NVLlsag~Dn~v~iWnv~t-geali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~ 204 (472)
T KOG0303|consen 145 NVLLSAGSDNTVSIWNVGT-GEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR 204 (472)
T ss_pred hhHhhccCCceEEEEeccC-CceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCC
Confidence 5678889999999999988 55555555 999999999999999999999999999999874
No 110
>KOG0303|consensus
Probab=99.07 E-value=5.7e-10 Score=55.46 Aligned_cols=64 Identities=27% Similarity=0.531 Sum_probs=54.3
Q ss_pred cCcEEEEeeCCCCEEEeecCCC------CcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNL------KTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 68 (68)
|.+.|++|+.|..+.+|.+... ..++..+.+|...|..++|+|. .+.+++++.|.++.+|++.+
T Consensus 93 nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~t 163 (472)
T KOG0303|consen 93 NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGT 163 (472)
T ss_pred CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccC
Confidence 5678999999999999998642 2467788899999999999995 57788889999999999753
No 111
>KOG1274|consensus
Probab=99.05 E-value=4.9e-09 Score=56.29 Aligned_cols=65 Identities=26% Similarity=0.523 Sum_probs=58.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++-+|.+++.|+.|-.|++.+... ........+|..+|.++.++|++..+++.+-+|.+.+|+++
T Consensus 104 v~g~g~~iaagsdD~~vK~~~~~D-~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~ 168 (933)
T KOG1274|consen 104 VSGSGKMIAAGSDDTAVKLLNLDD-SSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ 168 (933)
T ss_pred EecCCcEEEeecCceeEEEEeccc-cchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence 455788999999999999998877 45567788999999999999999999999999999999976
No 112
>KOG0267|consensus
Probab=99.05 E-value=1.6e-10 Score=60.60 Aligned_cols=65 Identities=25% Similarity=0.490 Sum_probs=59.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+|.+++.+..|..+++|+... +.....+..|...+..+.++|..-++.+++.|+++++||++
T Consensus 162 lsP~Gr~v~~g~ed~tvki~d~~a-gk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle 226 (825)
T KOG0267|consen 162 LSPDGRWVASGGEDNTVKIWDLTA-GKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE 226 (825)
T ss_pred ecCCCceeeccCCcceeeeecccc-cccccccccccccccccccCchhhhhccCCCCceeeeeccc
Confidence 679999999999999999999977 66677788899999999999988899999999999999986
No 113
>KOG0308|consensus
Probab=99.05 E-value=2.6e-09 Score=55.75 Aligned_cols=65 Identities=28% Similarity=0.343 Sum_probs=57.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++.||..+++++.|+.|++|++.. ..++.++..|...++++..+|.-..+.+|+.|+.+..-|++
T Consensus 221 ~~dDGt~~ls~sSDgtIrlWdLgq-QrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~ 285 (735)
T KOG0308|consen 221 VNDDGTRLLSASSDGTIRLWDLGQ-QRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLR 285 (735)
T ss_pred EcCCCCeEeecCCCceEEeeeccc-cceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccC
Confidence 467899999999999999999987 67888899999999999999888899999999998877665
No 114
>KOG0646|consensus
Probab=99.05 E-value=9.3e-10 Score=55.30 Aligned_cols=63 Identities=16% Similarity=0.314 Sum_probs=56.3
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+|+|.+++.|...+.+++|.+.+ +..+..+..|-..+.++.++.++.++++++.||.+.+|++
T Consensus 90 ~n~G~~l~ag~i~g~lYlWelss-G~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l 152 (476)
T KOG0646|consen 90 SNLGYFLLAGTISGNLYLWELSS-GILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLL 152 (476)
T ss_pred CCCceEEEeecccCcEEEEEecc-ccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEE
Confidence 56788888887899999999988 6777778889889999999999999999999999999975
No 115
>KOG0290|consensus
Probab=99.05 E-value=2.6e-09 Score=51.60 Aligned_cols=62 Identities=31% Similarity=0.560 Sum_probs=50.1
Q ss_pred cEEEEeeCCCCEEEeecCCCC-----------------------------------------------cceEEeccCCCC
Q psy11876 7 RVFATCSDDTTIALWDARNLK-----------------------------------------------TRVRTLQGHSNW 39 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~ 39 (68)
+.|++.+.||.++++|++... .++..+..|...
T Consensus 210 ~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~ 289 (364)
T KOG0290|consen 210 DVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQAS 289 (364)
T ss_pred ceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCccc
Confidence 678999999999999986321 233345578899
Q ss_pred EEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 40 VKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
|+.++|.|.. .++.+++.|.++.+||+++
T Consensus 290 VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 290 VNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred ccceEecCCCCceeeecCCcceEEEEeccc
Confidence 9999999964 7899999999999999864
No 116
>KOG1446|consensus
Probab=99.03 E-value=1.5e-08 Score=48.98 Aligned_cols=66 Identities=21% Similarity=0.327 Sum_probs=52.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCE---EEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWV---KNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++||..+..+...+.+.+.+.-. +.....+..+...- ....+.|+++.+++++.||++.+|++++
T Consensus 195 FS~dGK~iLlsT~~s~~~~lDAf~-G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~t 263 (311)
T KOG1446|consen 195 FSPDGKSILLSTNASFIYLLDAFD-GTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLET 263 (311)
T ss_pred EcCCCCEEEEEeCCCcEEEEEccC-CcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCC
Confidence 688999999999999999998876 45555555554322 4667899999999999999999998753
No 117
>KOG1036|consensus
Probab=99.02 E-value=8.9e-09 Score=49.78 Aligned_cols=63 Identities=21% Similarity=0.362 Sum_probs=50.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|.+...+++|+.|+.++.+|+.+ .....+..|..++.++...+....+++++.|+++.+||.+
T Consensus 62 F~d~~~~~~G~~dg~vr~~Dln~--~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R 124 (323)
T KOG1036|consen 62 FADESTIVTGGLDGQVRRYDLNT--GNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPR 124 (323)
T ss_pred ccCCceEEEeccCceEEEEEecC--CcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence 34555677777788888877765 2344566788899999999888899999999999999987
No 118
>KOG0643|consensus
Probab=99.02 E-value=2.4e-09 Score=51.15 Aligned_cols=66 Identities=21% Similarity=0.275 Sum_probs=56.7
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.|-+..|++|-.+|.|..|+.++....+.....|...+..++++++..++++++.|.+..+||.++
T Consensus 156 g~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t 221 (327)
T KOG0643|consen 156 GPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT 221 (327)
T ss_pred cccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccc
Confidence 356778999999999999999884445555677888999999999999999999999999999753
No 119
>KOG0301|consensus
Probab=99.01 E-value=7.2e-09 Score=54.43 Aligned_cols=61 Identities=34% Similarity=0.693 Sum_probs=53.4
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.++..|++++.||.|+.|+.. +..+....+|++.+.+++..+....+++++.|+++++|+.
T Consensus 188 l~~~~flScsNDg~Ir~w~~~--ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~ 248 (745)
T KOG0301|consen 188 LDDSHFLSCSNDGSIRLWDLD--GEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKK 248 (745)
T ss_pred ecCCCeEeecCCceEEEEecc--CceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeec
Confidence 455678999999999999994 4667888999999999998888889999999999999975
No 120
>KOG0641|consensus
Probab=99.01 E-value=8.7e-09 Score=48.58 Aligned_cols=65 Identities=23% Similarity=0.371 Sum_probs=59.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.|.++.+++|-.|....+|+++- ..++..+..|...+.++.|+|.-.++.+++.|..|++-|++
T Consensus 239 vdpsgrll~sg~~dssc~lydirg-~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 239 VDPSGRLLASGHADSSCMLYDIRG-GRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred ECCCcceeeeccCCCceEEEEeeC-CceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 457889999999999999999987 67888899999999999999999999999999999998764
No 121
>KOG0274|consensus
Probab=99.01 E-value=8.6e-09 Score=53.49 Aligned_cols=60 Identities=30% Similarity=0.643 Sum_probs=47.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
....+.+|+.|..|++|++.+ +..+....+|..+|.++... +..+++++.|+++.+|+++
T Consensus 300 ~~~~~~sgs~D~tVkVW~v~n-~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~ 359 (537)
T KOG0274|consen 300 DPFLLVSGSRDNTVKVWDVTN-GACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR 359 (537)
T ss_pred cCceEeeccCCceEEEEeccC-cceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence 344567778888888888876 56677777788888888875 6788888889999999864
No 122
>KOG0313|consensus
Probab=99.01 E-value=1e-08 Score=50.88 Aligned_cols=61 Identities=25% Similarity=0.479 Sum_probs=53.4
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+..+|++++.|+.+++||.+....+++.+.+|...+.++.|... ..+++|+.|.+++++.-
T Consensus 357 ~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 357 NEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGADNKLRIFKG 417 (423)
T ss_pred CceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCcceEEEecc
Confidence 45789999999999999999856689999999999999999654 47899999999999864
No 123
>KOG0300|consensus
Probab=99.00 E-value=5.2e-09 Score=51.30 Aligned_cols=65 Identities=32% Similarity=0.575 Sum_probs=53.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.|+.+++++++.|...++||++..-..+..+++|...|.+..|..+. .+++++.|.++++||+++
T Consensus 323 HptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrN 387 (481)
T KOG0300|consen 323 HPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRN 387 (481)
T ss_pred CCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeecc
Confidence 35677899999999999999986444567899999999998887654 578899999999999863
No 124
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.98 E-value=3.1e-08 Score=45.63 Aligned_cols=63 Identities=24% Similarity=0.456 Sum_probs=46.5
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC------CCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF------DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~ 67 (68)
.+|+|++++.++.+ |.+.+|+... ...+.... + ..+..++|+|++++++++.. |..+.+|++.
T Consensus 108 wsP~G~~l~~~g~~n~~G~l~~wd~~~-~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 108 WSPDGRFLVLAGFGNLNGDLEFWDVRK-KKKISTFE-H-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred ECCCCCEEEEEEccCCCcEEEEEECCC-CEEeeccc-c-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 57899999988754 5599999986 34443332 3 33678999999999987764 6778888764
No 125
>KOG0642|consensus
Probab=98.98 E-value=4.9e-09 Score=53.87 Aligned_cols=63 Identities=25% Similarity=0.471 Sum_probs=54.4
Q ss_pred ecCcEEEEeeCCCCEEEeecCCC-------CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNL-------KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+-...+++++.|+.+.+|+++.. -.++..+.+|..+|.++.+.+.+..+.+++.|+.|+.|++
T Consensus 304 ~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~ 373 (577)
T KOG0642|consen 304 PSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNL 373 (577)
T ss_pred CCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeecc
Confidence 34567999999999999998321 2578889999999999999999999999999999999964
No 126
>KOG0772|consensus
Probab=98.96 E-value=5.4e-09 Score=53.66 Aligned_cols=63 Identities=30% Similarity=0.614 Sum_probs=48.3
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEec-----cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQ-----GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+...|.+++.|+.+++|+..........+. +..-.+...+|++++.++++++.||.|.+|+..
T Consensus 280 ~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~ 347 (641)
T KOG0772|consen 280 NKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKG 347 (641)
T ss_pred cccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecC
Confidence 356799999999999999975332222222 233456788999999999999999999999964
No 127
>KOG1408|consensus
Probab=98.96 E-value=6.5e-10 Score=58.89 Aligned_cols=66 Identities=18% Similarity=0.284 Sum_probs=56.9
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC---CCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS---KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++|+++.+++|...|.+++|++.. ........+|+.+|.++.++. ...++++++.|+.|+++|..
T Consensus 466 ~vSp~gqhLAsGDr~GnlrVy~Lq~-l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~ 534 (1080)
T KOG1408|consen 466 AVSPDGQHLASGDRGGNLRVYDLQE-LEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVK 534 (1080)
T ss_pred EECCCcceecccCccCceEEEEehh-hhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecc
Confidence 3689999999999999999999987 455667889999999999975 34788999999999999864
No 128
>KOG0646|consensus
Probab=98.95 E-value=3.1e-08 Score=50.11 Aligned_cols=66 Identities=21% Similarity=0.322 Sum_probs=54.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCC--------CCcceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARN--------LKTRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 67 (68)
|+-|+.+|++|+.||.|.+|.+.. ...+...+..|...|..+...+. ...+.+.+.|.++++||+.
T Consensus 131 fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS 206 (476)
T KOG0646|consen 131 FSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLS 206 (476)
T ss_pred EeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEec
Confidence 566899999999999999998732 13567788899999999887764 4688999999999999975
No 129
>KOG0305|consensus
Probab=98.94 E-value=3.7e-09 Score=54.01 Aligned_cols=62 Identities=32% Similarity=0.478 Sum_probs=53.5
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++..+.+|+.++.+..++++..........+|..+|+.++|+++++++++++.|+.+.+||.
T Consensus 269 ~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~ 330 (484)
T KOG0305|consen 269 NSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG 330 (484)
T ss_pred cCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccC
Confidence 45678999999999999998633333347789999999999999999999999999999996
No 130
>KOG0267|consensus
Probab=98.93 E-value=4.4e-09 Score=55.53 Aligned_cols=65 Identities=26% Similarity=0.498 Sum_probs=57.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.|-+.+++.|+.|...++||++. ..+...+.+|...+..+.+.|++++++.++.|..+.+||..
T Consensus 120 f~P~~~~~a~gStdtd~~iwD~Rk-~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ 184 (825)
T KOG0267|consen 120 FHPYGEFFASGSTDTDLKIWDIRK-KGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT 184 (825)
T ss_pred eccceEEeccccccccceehhhhc-cCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccc
Confidence 345566789999999999999987 56788888899999999999999999999999999999974
No 131
>KOG0268|consensus
Probab=98.93 E-value=1.7e-09 Score=53.36 Aligned_cols=66 Identities=23% Similarity=0.396 Sum_probs=59.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+|+.-.|.+|+.|..++.+|++....++....+|.+.+..+.|+|.|+.+++++.|.+|++|..+
T Consensus 237 wnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~ 302 (433)
T KOG0268|consen 237 WNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVN 302 (433)
T ss_pred cCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecC
Confidence 356666789999999999999988778888899999999999999999999999999999999764
No 132
>KOG0640|consensus
Probab=98.92 E-value=1.7e-08 Score=49.37 Aligned_cols=64 Identities=25% Similarity=0.373 Sum_probs=53.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceE---EeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVR---TLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+.|.|.+++.|.....+++|++.+ .++.. ....|...|..+.+++.+++.++++.||-|++||-
T Consensus 224 fHPsGefllvgTdHp~~rlYdv~T-~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDG 290 (430)
T KOG0640|consen 224 FHPSGEFLLVGTDHPTLRLYDVNT-YQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDG 290 (430)
T ss_pred ecCCCceEEEecCCCceeEEeccc-eeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeecc
Confidence 457889999999999999999987 23222 34568889999999999999999999999999983
No 133
>KOG0642|consensus
Probab=98.92 E-value=1.3e-08 Score=52.39 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=54.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC---------CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL---------KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++..+++|+-||.|+.|++..+ ......+.+|...++.++++.....+++++.||++++|+..
T Consensus 352 v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~ 426 (577)
T KOG0642|consen 352 VPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT 426 (577)
T ss_pred ecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccC
Confidence 4568889999999999999966421 13345678999999999999988789999999999999864
No 134
>KOG0290|consensus
Probab=98.92 E-value=4.4e-08 Score=47.53 Aligned_cols=64 Identities=30% Similarity=0.463 Sum_probs=52.6
Q ss_pred cCcEEEEeeCCCCEEEeecCCC--CcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNL--KTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
+.+.+.+++-|-...+|+++.. .....++-+|..+|..++|...+ ..+++++.||.+++||++.
T Consensus 162 dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~ 228 (364)
T KOG0290|consen 162 DPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRS 228 (364)
T ss_pred CcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecc
Confidence 4578999999999999999872 12344566799999999999876 6788999999999999873
No 135
>KOG0300|consensus
Probab=98.91 E-value=5.3e-09 Score=51.28 Aligned_cols=62 Identities=27% Similarity=0.425 Sum_probs=55.9
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+..+++++.|..-.+||.++ +.++..+.+|..+....+-+|..+++++.+.|.++++||++
T Consensus 283 gg~Q~vTaSWDRTAnlwDVEt-ge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFR 344 (481)
T KOG0300|consen 283 GGQQMVTASWDRTANLWDVET-GEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFR 344 (481)
T ss_pred Ccceeeeeeccccceeeeecc-CceeccccCcchhccccccCCcceEEEEeccCceeEeccch
Confidence 356789999999999999998 77888899999988888889999999999999999999986
No 136
>KOG2445|consensus
Probab=98.90 E-value=6.3e-08 Score=47.22 Aligned_cols=64 Identities=20% Similarity=0.479 Sum_probs=51.8
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCC---cceEEeccCCCCEEEEEEcC-C-CCEEEEEeCCCCEEEEeC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLK---TRVRTLQGHSNWVKNIEFSS-K-DNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~~~~~ 66 (68)
.+.|+..++|+.|..+++|+.+... ........|...+..+.|.+ + |+.+++++.|+++.+|.-
T Consensus 22 D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 22 DFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE 90 (361)
T ss_pred cccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence 4568899999999999999975421 23445678999999999965 4 899999999999999964
No 137
>KOG1007|consensus
Probab=98.90 E-value=7.9e-09 Score=50.00 Aligned_cols=63 Identities=35% Similarity=0.660 Sum_probs=47.6
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
+++.+++.+ |+.+..||.++.......-.+|...+..+.++|+. ..+++|+.|+.+++||.++
T Consensus 183 dgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~ 246 (370)
T KOG1007|consen 183 DGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRK 246 (370)
T ss_pred ccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccC
Confidence 566777665 68999999987332222334677778999999964 6788999999999999863
No 138
>KOG1539|consensus
Probab=98.87 E-value=6e-08 Score=52.09 Aligned_cols=62 Identities=29% Similarity=0.441 Sum_probs=50.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC-CCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD-GSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~ 65 (68)
|||||+.++++++|+.|++||+.+ ...+-.+ ....+..++.++|.+..+++...| .-+.+|.
T Consensus 584 FS~DgrWlisasmD~tIr~wDlpt-~~lID~~-~vd~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 584 FSPDGRWLISASMDSTIRTWDLPT-GTLIDGL-LVDSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred eCCCCcEEEEeecCCcEEEEeccC-cceeeeE-ecCCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 789999999999999999999987 3333222 245667899999999999998877 6788884
No 139
>KOG1009|consensus
Probab=98.86 E-value=2e-08 Score=50.14 Aligned_cols=66 Identities=26% Similarity=0.499 Sum_probs=54.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecC--------C------CCcc-eEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDAR--------N------LKTR-VRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~--------~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++|++..+++|+.++.+.+|... + ..+. .....+|...+..++|+++++.+.+++.|..+++||+
T Consensus 73 f~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv 152 (434)
T KOG1009|consen 73 FSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDV 152 (434)
T ss_pred EcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEe
Confidence 67889999999999999999765 1 0111 2245568888999999999999999999999999997
Q ss_pred C
Q psy11876 67 N 67 (68)
Q Consensus 67 ~ 67 (68)
+
T Consensus 153 ~ 153 (434)
T KOG1009|consen 153 H 153 (434)
T ss_pred c
Confidence 5
No 140
>KOG0268|consensus
Probab=98.85 E-value=6.6e-09 Score=51.39 Aligned_cols=64 Identities=14% Similarity=0.274 Sum_probs=50.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccC-CCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGH-SNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++|.|+-|++|+.|..|++|.... ....-..... -..|.++.|+.+.+++++|+.|+.+++|..
T Consensus 280 fsptG~EfvsgsyDksIRIf~~~~-~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 280 FSPTGQEFVSGSYDKSIRIFPVNH-GHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKA 344 (433)
T ss_pred cCCCcchhccccccceEEEeecCC-CcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeec
Confidence 688999999999999999998875 2221122211 134789999999999999999999999963
No 141
>KOG0641|consensus
Probab=98.85 E-value=5.6e-08 Score=45.95 Aligned_cols=62 Identities=32% Similarity=0.483 Sum_probs=49.6
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEec----c---CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQ----G---HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++-++++|+.|..+++|+++. ..++.... + ....|..++..|.+++++++-.|....+||++
T Consensus 193 n~~m~~sgsqdktirfwdlrv-~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydir 261 (350)
T KOG0641|consen 193 NGAMFASGSQDKTIRFWDLRV-NSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIR 261 (350)
T ss_pred cCcEEEccCCCceEEEEeeec-cceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEee
Confidence 567899999999999999986 33443332 1 12467888999999999999999999999976
No 142
>KOG1332|consensus
Probab=98.85 E-value=3.1e-08 Score=47.04 Aligned_cols=63 Identities=22% Similarity=0.385 Sum_probs=51.6
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCc-ceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKT-RVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 67 (68)
-|.+|++++.|+.+-+|....... .......|...+++++|.|. +..+++++.||.+.+.+++
T Consensus 69 ~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~ 134 (299)
T KOG1332|consen 69 FGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYD 134 (299)
T ss_pred cCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEc
Confidence 368999999999999999876432 24456678899999999995 5788999999999998765
No 143
>KOG0321|consensus
Probab=98.84 E-value=1.1e-08 Score=53.51 Aligned_cols=62 Identities=31% Similarity=0.512 Sum_probs=51.7
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEE--eccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRT--LQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
....|++++-|..+++|+... ...... +.+|...+.++++.+. ...+.+|+.|+.+.+||++
T Consensus 111 ge~~lVsasGDsT~r~Wdvk~-s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R 175 (720)
T KOG0321|consen 111 GESLLVSASGDSTIRPWDVKT-SRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR 175 (720)
T ss_pred CceeEEEccCCceeeeeeecc-ceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence 446788999999999999986 344443 7899999999999995 5778899999999999986
No 144
>KOG1034|consensus
Probab=98.84 E-value=1.3e-08 Score=49.81 Aligned_cols=61 Identities=21% Similarity=0.358 Sum_probs=52.8
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 68 (68)
.+++.++.-|.|++.+... ......+.+|...|+.+.+.|. .+++++++.|..+++|++++
T Consensus 106 p~la~~G~~GvIrVid~~~-~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~ 167 (385)
T KOG1034|consen 106 PFLAAGGYLGVIRVIDVVS-GQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT 167 (385)
T ss_pred eeEEeecceeEEEEEecch-hhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC
Confidence 4678888889999999877 5667778899999999999996 58999999999999999874
No 145
>KOG1274|consensus
Probab=98.84 E-value=8.1e-08 Score=51.93 Aligned_cols=65 Identities=15% Similarity=0.332 Sum_probs=50.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEecc--CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQG--HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..|++..++....|+.|++|+... -.....+.. +...+..++|+|+|.++++++.++.|.+||..
T Consensus 196 W~Pk~g~la~~~~d~~Vkvy~r~~-we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 196 WHPKGGTLAVPPVDNTVKVYSRKG-WELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred ecCCCCeEEeeccCCeEEEEccCC-ceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 467877888888899999998865 223333332 33347899999999999999999999999975
No 146
>KOG0288|consensus
Probab=98.83 E-value=2e-09 Score=53.67 Aligned_cols=65 Identities=26% Similarity=0.467 Sum_probs=54.5
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.+++..+++++.|+.+++|+... .....++.+|...+.+..+......+++++.|.+++.||+++
T Consensus 228 d~~~~~~iAas~d~~~r~Wnvd~-~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k 292 (459)
T KOG0288|consen 228 DSDNKHVIAASNDKNLRLWNVDS-LRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQK 292 (459)
T ss_pred cCCCceEEeecCCCceeeeeccc-hhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhh
Confidence 34667888889999999999987 566778889999999998877655589999999999999863
No 147
>KOG3881|consensus
Probab=98.83 E-value=3.6e-08 Score=49.06 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=56.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
..|.++++++|...+.+..+|.+........+.+..+.+.++..+|.++.+++++.|+.++++|..+
T Consensus 255 l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 255 LTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred ecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeeccc
Confidence 3578899999999999999999873333334677778889999999999999999999999999763
No 148
>KOG4328|consensus
Probab=98.83 E-value=1.4e-08 Score=51.33 Aligned_cols=65 Identities=17% Similarity=0.267 Sum_probs=51.4
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
.+...++.+..-|...+|+.+..+........|...|..++++|.. ..+++++.|+++++||+++
T Consensus 289 ~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~ 354 (498)
T KOG4328|consen 289 AESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQ 354 (498)
T ss_pred CCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhh
Confidence 3445566666667889999987555566677788899999999964 7789999999999999874
No 149
>KOG2055|consensus
Probab=98.83 E-value=1.4e-07 Score=48.04 Aligned_cols=65 Identities=14% Similarity=0.253 Sum_probs=50.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC-CEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN-WVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++.++..+++++.+|.|.+|+++. ..+...+..... ...+++.++++.++++|+..|.+.+||..
T Consensus 352 fsSdsk~l~~~~~~GeV~v~nl~~-~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~ 417 (514)
T KOG2055|consen 352 FSSDSKELLASGGTGEVYVWNLRQ-NSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGN 417 (514)
T ss_pred EecCCcEEEEEcCCceEEEEecCC-cceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccc
Confidence 567888888888899999999987 455555543322 23466677889999999999999999854
No 150
>KOG0639|consensus
Probab=98.82 E-value=1.2e-08 Score=52.50 Aligned_cols=66 Identities=20% Similarity=0.350 Sum_probs=50.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCC--CCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHS--NWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++|++.+++|+.-..+.+||+... .+........ -....++.+|+.+..++|+.||.|.+||+++
T Consensus 473 L~pdgrtLivGGeastlsiWDLAap-TprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn 540 (705)
T KOG0639|consen 473 LLPDGRTLIVGGEASTLSIWDLAAP-TPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN 540 (705)
T ss_pred ecCCCceEEeccccceeeeeeccCC-CcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc
Confidence 5789999999999999999999752 2222222222 2345677899999999999999999999874
No 151
>KOG1407|consensus
Probab=98.81 E-value=6.8e-08 Score=46.26 Aligned_cols=60 Identities=17% Similarity=0.325 Sum_probs=49.8
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+|..-.-.|.|.+..... .+++..+.+|.....++.+.|+++++++|+.|..+.+||+.
T Consensus 160 d~Fflt~GlG~v~ILsyps-Lkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ 219 (313)
T KOG1407|consen 160 DLFFLTNGLGCVEILSYPS-LKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD 219 (313)
T ss_pred CEEEEecCCceEEEEeccc-cccccccccCCcceEEEEECCCCceEeeccccceeeccChh
Confidence 3444444458888888766 57788899999988999999999999999999999999974
No 152
>KOG1188|consensus
Probab=98.80 E-value=6.3e-08 Score=47.65 Aligned_cols=61 Identities=18% Similarity=0.390 Sum_probs=49.4
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC--CCCEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS--KDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~ 68 (68)
..++++..++.+++|+..+ ......+.++...+..+.+.. ....+.+++.||++++||+|.
T Consensus 41 ~~vav~lSngsv~lyd~~t-g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs 103 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGT-GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRS 103 (376)
T ss_pred eeEEEEecCCeEEEEeccc-hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeec
Confidence 4578888899999999987 566667777777777777765 457889999999999999873
No 153
>KOG0299|consensus
Probab=98.80 E-value=1.2e-07 Score=48.04 Aligned_cols=65 Identities=26% Similarity=0.604 Sum_probs=50.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec-cC-----------CCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ-GH-----------SNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.+...+++|+.+|.|.+|++.. +.|+.... +| ..++.+++..|...++++++.+|.+++|.+.
T Consensus 334 ~~In~~HfvsGSdnG~IaLWs~~K-Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~ 410 (479)
T KOG0299|consen 334 AFINDEHFVSGSDNGSIALWSLLK-KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIE 410 (479)
T ss_pred EEecccceeeccCCceEEEeeecc-cCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEec
Confidence 355778899999999999999876 44443322 22 1278889999999999999999999999754
No 154
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.79 E-value=3.8e-07 Score=42.09 Aligned_cols=62 Identities=24% Similarity=0.449 Sum_probs=44.8
Q ss_pred eeecCcEEEE--eeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC---CCEEEEeCC
Q psy11876 2 IFLDTRVFAT--CSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD---GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~ 67 (68)
.+|+++.|+. |..+..+.+|+.+. .++..+. ......+.|+|+++.++.++.+ |.+.+||.+
T Consensus 67 WsP~g~~favi~g~~~~~v~lyd~~~--~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~ 133 (194)
T PF08662_consen 67 WSPNGNEFAVIYGSMPAKVTLYDVKG--KKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR 133 (194)
T ss_pred ECcCCCEEEEEEccCCcccEEEcCcc--cEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECC
Confidence 3678877644 45667899999963 3444443 4556789999999999888754 669999975
No 155
>KOG0644|consensus
Probab=98.78 E-value=2.2e-09 Score=57.62 Aligned_cols=61 Identities=28% Similarity=0.541 Sum_probs=52.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++.+.-++++++.|..|++|.+.. ..++..+.+|++.|.+++++|.. +.+.||++++||.+
T Consensus 240 vs~~n~~iaaaS~D~vIrvWrl~~-~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 240 VSSNNTMIAAASNDKVIRVWRLPD-GAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred cchhhhhhhhcccCceEEEEecCC-CchHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 345566789999999999999988 67888899999999999999954 55789999999975
No 156
>KOG0280|consensus
Probab=98.78 E-value=1.4e-07 Score=45.84 Aligned_cols=63 Identities=27% Similarity=0.350 Sum_probs=50.5
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEE-eccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRT-LQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+.+++|+.|+.+..||++..+..+.. ...|..+|.++.-+| .+..+++|+.|..+++||.+
T Consensus 177 ~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR 241 (339)
T KOG0280|consen 177 EPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR 241 (339)
T ss_pred CCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence 4478999999999999999843332222 456788898888776 57899999999999999976
No 157
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.75 E-value=2.3e-07 Score=48.18 Aligned_cols=63 Identities=14% Similarity=0.194 Sum_probs=50.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+|+...++.|..||.+.+|+... +.. ......-....++|+|++..++.++..|.+.+||+.
T Consensus 267 ~sp~E~kLvlGC~DgSiiLyD~~~-~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 267 RSPSEDKLVLGCEDGSIILYDTTR-GVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred cCcccceEEEEecCCeEEEEEcCC-Cee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 467788999999999999999875 222 222233445789999999999999999999999963
No 158
>KOG0289|consensus
Probab=98.75 E-value=3e-07 Score=46.65 Aligned_cols=64 Identities=17% Similarity=0.257 Sum_probs=50.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEecc--CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQG--HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.|++.+|.+++.|+...+.++.. ......... ......+.+++|++..+.++..|+.+.+||+.
T Consensus 312 h~tgeYllsAs~d~~w~Fsd~~~-g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 312 HPTGEYLLSASNDGTWAFSDISS-GSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred ccCCcEEEEecCCceEEEEEccC-CcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcC
Confidence 46788999999999999888887 333333322 23456889999999999999999999999975
No 159
>KOG4283|consensus
Probab=98.75 E-value=5.7e-08 Score=47.34 Aligned_cols=61 Identities=31% Similarity=0.517 Sum_probs=48.1
Q ss_pred cEEEEeeCCCCEEEeecCCCCc-------------ceE-EeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKT-------------RVR-TLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~-------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
-.+++|+.|+.+++||++.... +.. .-.+|...+..++|..++.++.+++.|..+++|+..
T Consensus 202 ~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 202 WVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME 276 (397)
T ss_pred eEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecc
Confidence 3689999999999999974211 111 134566788999999999999999999999999865
No 160
>KOG4714|consensus
Probab=98.74 E-value=2.1e-08 Score=47.95 Aligned_cols=62 Identities=32% Similarity=0.602 Sum_probs=53.9
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.++.|+.||.+.+|+.+....+...+..|..+++-+.|+|. +..+++++.||.+-.||..
T Consensus 192 q~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 192 QHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred ccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCC
Confidence 4678999999999999998755667778889999999999994 6889999999999999865
No 161
>KOG0321|consensus
Probab=98.73 E-value=7e-08 Score=50.67 Aligned_cols=66 Identities=17% Similarity=0.264 Sum_probs=57.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++|+.|...++|.+.....+.....+|...|..++|.|. -..+++++.|..+.+|++.
T Consensus 325 lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~ 391 (720)
T KOG0321|consen 325 LSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLS 391 (720)
T ss_pred cCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEecc
Confidence 57899999999999999999998766667778899999999999984 4677888999999999864
No 162
>KOG4328|consensus
Probab=98.71 E-value=1.3e-07 Score=48.08 Aligned_cols=61 Identities=31% Similarity=0.381 Sum_probs=49.7
Q ss_pred CcEEEEeeCCCCEEEeecCCC--Cc-ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 6 TRVFATCSDDTTIALWDARNL--KT-RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
...+++++.|...++||++.. +. ++.....|...|++..|+|.+-.+++-+.|..|++||-
T Consensus 335 p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ds 398 (498)
T KOG4328|consen 335 PWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDS 398 (498)
T ss_pred chheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeec
Confidence 467899999999999999752 12 34555678999999999997645888889999999985
No 163
>KOG0974|consensus
Probab=98.71 E-value=2.2e-07 Score=50.70 Aligned_cols=62 Identities=32% Similarity=0.409 Sum_probs=53.5
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+.+++.+++.++|..+++|.+.+.........+|..+++...+.|. .+.+.+.|.+.++|+.
T Consensus 184 s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 184 SLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGV 245 (967)
T ss_pred ccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEec
Confidence 4588999999999999999998754444467789999999999887 8999999999999954
No 164
>KOG2919|consensus
Probab=98.70 E-value=2.5e-07 Score=45.61 Aligned_cols=66 Identities=21% Similarity=0.422 Sum_probs=53.9
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC-CCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF-DGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~ 68 (68)
++| +...++.++....+-++.... ..+.....+|..+|..++|.++++.+.++.. +..|..||++.
T Consensus 215 ~sP~~~~~~a~gsY~q~~giy~~~~-~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 215 FSPMDSKTLAVGSYGQRVGIYNDDG-RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRY 282 (406)
T ss_pred ccCCCCcceeeecccceeeeEecCC-CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence 455 345788888888888887766 6778888899999999999999988877765 68999999873
No 165
>KOG2110|consensus
Probab=98.68 E-value=8.1e-07 Score=44.26 Aligned_cols=66 Identities=14% Similarity=0.262 Sum_probs=52.3
Q ss_pred CeeecCcEEEEeeCCCC-EEEeecCCCCcceEEeccC--CCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTT-IALWDARNLKTRVRTLQGH--SNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++++|.++|+++..|. |+|+.... +..+..+.-. ...+.+++|+++++.+.+.+..+++++|.+.
T Consensus 180 afs~~G~llATASeKGTVIRVf~v~~-G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 180 AFSPDGTLLATASEKGTVIRVFSVPE-GQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred EECCCCCEEEEeccCceEEEEEEcCC-ccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence 47889999999999985 56888876 5555555433 2356788999999999999999999999765
No 166
>KOG2048|consensus
Probab=98.68 E-value=5e-07 Score=47.73 Aligned_cols=65 Identities=17% Similarity=0.303 Sum_probs=49.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceE-E-eccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVR-T-LQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..|.+..++.|+.||.+..++..+ +...+ . +.-...++.+++|++.+..++.|+.|+.|++||..
T Consensus 118 i~p~~~~l~IgcddGvl~~~s~~p-~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~ 184 (691)
T KOG2048|consen 118 INPENTILAIGCDDGVLYDFSIGP-DKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK 184 (691)
T ss_pred eCCccceEEeecCCceEEEEecCC-ceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence 456677889999999777777765 32222 2 22245789999999999999999999999999975
No 167
>KOG2111|consensus
Probab=98.67 E-value=1e-06 Score=43.23 Aligned_cols=65 Identities=23% Similarity=0.375 Sum_probs=51.0
Q ss_pred eeecCcEEEEeeCCCC-EEEeecCCCCcceEEec-c-CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTT-IALWDARNLKTRVRTLQ-G-HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..+|..+|+++..|. |++|+..+ +..+..+. + ....+.+++++|+..+++..+..|+++++.++
T Consensus 189 Ln~~Gt~vATaStkGTLIRIFdt~~-g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~ 256 (346)
T KOG2111|consen 189 LNLQGTLVATASTKGTLIRIFDTED-GTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLR 256 (346)
T ss_pred EcCCccEEEEeccCcEEEEEEEcCC-CcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEee
Confidence 3457889999999985 56999987 44444443 2 23468899999999999999999999999765
No 168
>KOG0270|consensus
Probab=98.66 E-value=4.4e-07 Score=45.98 Aligned_cols=61 Identities=28% Similarity=0.444 Sum_probs=53.8
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
..+.++..||.++-++++....++.....|..+|..++++.. ...+++++.++.+.+|++.
T Consensus 343 ~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 343 NSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred eeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence 457788889999999999877899999999999999999886 4678899999999999864
No 169
>KOG0307|consensus
Probab=98.66 E-value=2.3e-08 Score=54.70 Aligned_cols=63 Identities=24% Similarity=0.466 Sum_probs=48.1
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEE-eccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRT-LQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 68 (68)
++.+++|..||.|.+||+.+...+... -......|.+++|+.+ .+.+++++.++++.+||++.
T Consensus 129 ~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~ 193 (1049)
T KOG0307|consen 129 GNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRK 193 (1049)
T ss_pred CceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccC
Confidence 469999999999999999764333322 1224567899999886 46677888889999999873
No 170
>KOG2110|consensus
Probab=98.65 E-value=1.1e-06 Score=43.87 Aligned_cols=50 Identities=28% Similarity=0.449 Sum_probs=43.6
Q ss_pred CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCC-EEEEeC
Q psy11876 16 TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGS-IYTWDI 66 (68)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~ 66 (68)
|.|.+|+..+ ..+...+.+|...+.+++++++|.++++++..|+ |+++..
T Consensus 153 GdV~l~d~~n-l~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v 203 (391)
T KOG2110|consen 153 GDVVLFDTIN-LQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSV 203 (391)
T ss_pred ceEEEEEccc-ceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence 7899999987 5778888999999999999999999999999887 556654
No 171
>KOG1310|consensus
Probab=98.63 E-value=5e-07 Score=47.30 Aligned_cols=64 Identities=22% Similarity=0.411 Sum_probs=53.0
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEE-eccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRT-LQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+|.++++|+.|-.+.+|+.-. .++... -.+|..-|.+..|.|. .+.++++..|..|+++|+.
T Consensus 59 n~dG~lL~SGSDD~r~ivWd~~~-~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~ 125 (758)
T KOG1310|consen 59 NADGELLASGSDDTRLIVWDPFE-YKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLD 125 (758)
T ss_pred cCCCCEEeecCCcceEEeecchh-cceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecc
Confidence 35789999999999999999875 444444 4678888999999994 5788999999999999975
No 172
>KOG1538|consensus
Probab=98.62 E-value=3.6e-07 Score=48.86 Aligned_cols=63 Identities=16% Similarity=0.344 Sum_probs=53.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+-|||..++.+-. ..+.+||... +....+..+|...|.+++|+.++..+++|+.|..+.+|..
T Consensus 20 fkPDGsqL~lAAg-~rlliyD~nd-G~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~ 82 (1081)
T KOG1538|consen 20 FKPDGTQLILAAG-SRLLVYDTSD-GTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTS 82 (1081)
T ss_pred ECCCCceEEEecC-CEEEEEeCCC-cccccccccccceEEEEEEccCCceeccCCCceeEEEecc
Confidence 5678876655543 4788999977 6677789999999999999999999999999999999964
No 173
>KOG1063|consensus
Probab=98.60 E-value=3.9e-07 Score=48.36 Aligned_cols=64 Identities=25% Similarity=0.458 Sum_probs=51.6
Q ss_pred eeecCcEEEEeeCCC-----CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDT-----TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+|++++++++.... .|++|+..+ -.....+..|.-.|..++|+|+++++++.+.|++..+|..
T Consensus 533 ~s~~gnliASaCKS~~~ehAvI~lw~t~~-W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~ 601 (764)
T KOG1063|consen 533 ISPTGNLIASACKSSLKEHAVIRLWNTAN-WLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEV 601 (764)
T ss_pred ecCCCCEEeehhhhCCccceEEEEEeccc-hhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeee
Confidence 467888888876553 567787765 2334467889999999999999999999999999999975
No 174
>KOG1445|consensus
Probab=98.57 E-value=4.6e-07 Score=48.25 Aligned_cols=59 Identities=22% Similarity=0.342 Sum_probs=50.3
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++ ..+.+++||+.+ .+......+|...|.+..|+.++.++++.+.|.++++||.+
T Consensus 142 gil~s~-a~g~v~i~D~st-qk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR 200 (1012)
T KOG1445|consen 142 GILASG-AHGSVYITDIST-QKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR 200 (1012)
T ss_pred ceEEec-cCceEEEEEccc-CceeecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence 344444 468999999988 56677788899999999999999999999999999999976
No 175
>KOG2445|consensus
Probab=98.57 E-value=2.3e-06 Score=42.08 Aligned_cols=61 Identities=30% Similarity=0.512 Sum_probs=47.9
Q ss_pred CcEEEEeeCCCCEEEeecCCCC--------cceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeC
Q psy11876 6 TRVFATCSDDTTIALWDARNLK--------TRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~ 66 (68)
|+.+++++.|+.+.+|+-.... ....++......+..++|.|. +..+++++.||++++|+.
T Consensus 73 GqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA 143 (361)
T KOG2445|consen 73 GQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEA 143 (361)
T ss_pred cceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEec
Confidence 7889999999999999874211 123345566778999999994 678899999999999974
No 176
>KOG2394|consensus
Probab=98.55 E-value=6.2e-07 Score=46.64 Aligned_cols=43 Identities=26% Similarity=0.532 Sum_probs=37.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEc
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFS 46 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (68)
+||+++|++|++|-.|.||.... ++.+..-++|..+|..++|.
T Consensus 341 SPDGKyIvtGGEDDLVtVwSf~e-rRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 341 SPDGKYIVTGGEDDLVTVWSFEE-RRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred cCCccEEEecCCcceEEEEEecc-ceEEEeccccccceeeEeec
Confidence 78999999999999999999976 66666777899999888886
No 177
>KOG2106|consensus
Probab=98.55 E-value=2.6e-06 Score=44.27 Aligned_cols=65 Identities=18% Similarity=0.258 Sum_probs=51.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++|+|.+|+.|+.|+.+++|.....+...... ..+..++..+.|+++++.+.+.+.|-.+..|..
T Consensus 455 ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~ 520 (626)
T KOG2106|consen 455 YSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKP 520 (626)
T ss_pred EcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEcc
Confidence 67899999999999999999987644332211 223378899999999999999999999999953
No 178
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.55 E-value=3.2e-06 Score=40.48 Aligned_cols=59 Identities=24% Similarity=0.323 Sum_probs=44.4
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEE-EEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLL-VTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 67 (68)
..+++++.|+.+.+|+..+ ......+..+.. +..+.++|++..+ +++..++.+.+||..
T Consensus 2 ~~~~s~~~d~~v~~~d~~t-~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~ 61 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTAT-LEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLA 61 (300)
T ss_pred cEEEEecCCCEEEEEECCC-CceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECC
Confidence 5678889999999999876 444555554433 5678899988765 566778999999865
No 179
>KOG2055|consensus
Probab=98.55 E-value=1e-06 Score=45.05 Aligned_cols=65 Identities=23% Similarity=0.480 Sum_probs=52.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++++++|+..+..|.|.+....+ +..+..+. ..+.+..++|+.+++.+..++.+|.+.+||+++
T Consensus 311 VShd~~fia~~G~~G~I~lLhakT-~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~ 375 (514)
T KOG2055|consen 311 VSHDSNFIAIAGNNGHIHLLHAKT-KELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQ 375 (514)
T ss_pred ecCCCCeEEEcccCceEEeehhhh-hhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCC
Confidence 578999999999999999987766 33333343 345578899999999998888999999999874
No 180
>KOG0307|consensus
Probab=98.54 E-value=2.4e-07 Score=50.95 Aligned_cols=62 Identities=29% Similarity=0.584 Sum_probs=50.2
Q ss_pred cEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
..+++++.| ..+.+||++....+...+++|..++.++.|++.. +++++++.|+++.+|+..+
T Consensus 220 Tql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t 285 (1049)
T KOG0307|consen 220 TQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT 285 (1049)
T ss_pred eeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC
Confidence 345555544 4677899987667788889999999999999965 8899999999999998753
No 181
>KOG4378|consensus
Probab=98.54 E-value=4.9e-07 Score=46.79 Aligned_cols=61 Identities=30% Similarity=0.556 Sum_probs=49.0
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
.++.+++.+|.|.+||.............|..+...++|+|. ..++++.+.|..|.+||.+
T Consensus 178 ~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~ 239 (673)
T KOG4378|consen 178 FLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR 239 (673)
T ss_pred eeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence 467889999999999997632233345678888899999995 5788899999999999975
No 182
>KOG1009|consensus
Probab=98.54 E-value=9.8e-07 Score=44.44 Aligned_cols=61 Identities=25% Similarity=0.510 Sum_probs=49.2
Q ss_pred cEEEEeeCCCCEEEeecCCC--Cc------ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNL--KT------RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++|+-|..+++|..... .. ....+..|...++.+.|+|++.++++++.++.+.+|...
T Consensus 27 ~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~ 95 (434)
T KOG1009|consen 27 NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQG 95 (434)
T ss_pred cceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEec
Confidence 47999999999999987531 11 122345688899999999999999999999999999643
No 183
>KOG1963|consensus
Probab=98.54 E-value=1.2e-06 Score=47.28 Aligned_cols=68 Identities=22% Similarity=0.410 Sum_probs=53.9
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCC---CCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARN---LKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.++|+++.+++|..||.|.+|+--. .......+.=|..+|.++.|++++..+.+|+..+-+.+|.+.+
T Consensus 212 ~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 212 ALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred EeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 3689999999999999999997432 1122333444777899999999999999999999999998653
No 184
>KOG2106|consensus
Probab=98.54 E-value=1.1e-06 Score=45.52 Aligned_cols=61 Identities=23% Similarity=0.379 Sum_probs=49.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
|..+.-.++|..+|.+.+|+.... ........|...|.+++...++.++. ++.|+.+..||
T Consensus 254 F~engdviTgDS~G~i~Iw~~~~~-~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd 314 (626)
T KOG2106|consen 254 FLENGDVITGDSGGNILIWSKGTN-RISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWD 314 (626)
T ss_pred EcCCCCEEeecCCceEEEEeCCCc-eEEeEeeecCCceEEEEEecCccEee-cCccceEEecc
Confidence 444456789999999999999873 44445558999999999988888776 99999999997
No 185
>KOG1517|consensus
Probab=98.53 E-value=1.9e-06 Score=48.07 Aligned_cols=63 Identities=19% Similarity=0.333 Sum_probs=51.3
Q ss_pred cCcEEEEeeCCCCEEEeecCCC--CcceEEeccCCCC--EEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNL--KTRVRTLQGHSNW--VKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
+++++++|..||.+++||.+-. ...+.....|... |..+.+.+++ ..+++++.+|.|.+||++
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred CCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecc
Confidence 4689999999999999998642 2345566777766 8888888866 469999999999999987
No 186
>KOG1524|consensus
Probab=98.51 E-value=1.2e-06 Score=45.82 Aligned_cols=64 Identities=20% Similarity=0.451 Sum_probs=51.2
Q ss_pred eecCcEEEEeeCCCCEEEeecCCC--------C-------------------------------cceEEeccCCCCEEEE
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNL--------K-------------------------------TRVRTLQGHSNWVKNI 43 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~--------~-------------------------------~~~~~~~~~~~~~~~~ 43 (68)
+|+|.-+.+++.||.+++|.-.-. . ..+....+|.+-+.++
T Consensus 113 ~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~ 192 (737)
T KOG1524|consen 113 SPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSL 192 (737)
T ss_pred CCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEe
Confidence 578888999999999999974200 0 1233455788888999
Q ss_pred EEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 44 EFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 44 ~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.|++.+.++++++.|-...+||-
T Consensus 193 ~W~~~s~lI~sgGED~kfKvWD~ 215 (737)
T KOG1524|consen 193 SWSTQSNIIASGGEDFRFKIWDA 215 (737)
T ss_pred ecCccccceeecCCceeEEeecc
Confidence 99999999999999999999984
No 187
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.51 E-value=5.5e-06 Score=39.66 Aligned_cols=65 Identities=17% Similarity=0.236 Sum_probs=44.0
Q ss_pred eeecCcEEEE-eeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEE-eCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFAT-CSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTA-GFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~ 68 (68)
++++++.++. ...++.+.+|+... ....... .+...+..++|+|++..++++ ..++.+.+||.++
T Consensus 214 ~s~dg~~~~~~~~~~~~i~v~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~ 280 (300)
T TIGR03866 214 LTKDGKTAFVALGPANRVAVVDAKT-YEVLDYL-LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA 280 (300)
T ss_pred ECCCCCEEEEEcCCCCeEEEEECCC-CcEEEEE-EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 4567776444 34456799999876 3333222 233457789999999877765 5689999999763
No 188
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.51 E-value=1.3e-06 Score=28.96 Aligned_cols=36 Identities=39% Similarity=0.710 Sum_probs=30.0
Q ss_pred eEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 30 VRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
...+..+...+.+++|.+.+..+++++.++.+.+|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 344556777889999999888999999999999996
No 189
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.51 E-value=7.5e-06 Score=40.09 Aligned_cols=65 Identities=35% Similarity=0.642 Sum_probs=51.5
Q ss_pred eeecCcEEEEeeC-CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSD-DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 67 (68)
+.+++..++.++. ++.+++|+... .........|...+..+++.|.+. .+++++.++.+.+||.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~ 229 (466)
T COG2319 163 FSPDGKLLASGSSLDGTIKLWDLRT-GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS 229 (466)
T ss_pred ECCCCCEEEecCCCCCceEEEEcCC-CceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECC
Confidence 4566777888875 99999999976 455666777889999999998876 55565889999999754
No 190
>KOG0301|consensus
Probab=98.47 E-value=8.1e-07 Score=47.21 Aligned_cols=55 Identities=33% Similarity=0.652 Sum_probs=37.1
Q ss_pred EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 8 VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+++|+.|..|++|.-. ....++.+|..-|..++.-+++ .+++++.||.|++|++
T Consensus 153 ~~vTgsaDKtIklWk~~---~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~ 207 (745)
T KOG0301|consen 153 TYVTGSADKTIKLWKGG---TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL 207 (745)
T ss_pred cEEeccCcceeeeccCC---chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec
Confidence 66777777777777653 3355666777777777766553 4566777777777775
No 191
>KOG1408|consensus
Probab=98.44 E-value=1.5e-06 Score=46.90 Aligned_cols=65 Identities=25% Similarity=0.392 Sum_probs=58.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.|.+.++++...|..+.++|... +.+.....+|...|..+.|.++=+++++.+.|+-|.+|.+.
T Consensus 649 lDPSgiY~atScsdktl~~~Df~s-gEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 649 LDPSGIYLATSCSDKTLCFVDFVS-GECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred ECCCccEEEEeecCCceEEEEecc-chhhhhhcCcchheeeeeecccchhheeecCCceEEEEECc
Confidence 346788999999999999999987 67788899999999999999988899999999999999864
No 192
>KOG2919|consensus
Probab=98.44 E-value=8.2e-07 Score=43.89 Aligned_cols=56 Identities=18% Similarity=0.288 Sum_probs=45.0
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD 58 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (68)
.|+++++++|+.+|.|++|+.+....+......+..-++.++++|--..+++++..
T Consensus 306 d~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 306 DPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred CCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence 46789999999999999999987666666777778888899999976666666543
No 193
>KOG4378|consensus
Probab=98.44 E-value=2.8e-06 Score=44.21 Aligned_cols=64 Identities=16% Similarity=0.291 Sum_probs=51.2
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|+| +..+|++.+.|..+.+||+.. .... .......+...++|.+++.++..|...|.+..||++
T Consensus 216 fspsne~l~vsVG~Dkki~~yD~~s-~~s~-~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R 280 (673)
T KOG4378|consen 216 FSPSNEALLVSVGYDKKINIYDIRS-QAST-DRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMR 280 (673)
T ss_pred ecCCccceEEEecccceEEEeeccc-cccc-ceeeecCCcceeeecCCceEEEeecCCceEEEEecc
Confidence 455 456789999999999999986 2222 233456677899999999999999999999999987
No 194
>KOG0771|consensus
Probab=98.41 E-value=2.1e-06 Score=43.18 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=51.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
++.+|++++.|+++|.|.+++..........-+.|...|..+.|+|+.+...+.+.+.+..+..
T Consensus 289 VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~ 352 (398)
T KOG0771|consen 289 VSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTK 352 (398)
T ss_pred EcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEE
Confidence 5789999999999999999998774434444567888999999999988888777777766653
No 195
>KOG2096|consensus
Probab=98.41 E-value=5.5e-06 Score=41.12 Aligned_cols=60 Identities=18% Similarity=0.438 Sum_probs=48.7
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++.+|.+++.|..|.+|+.+ ++.+..+......-...+.+|+++.++.+++...+.+|.+
T Consensus 198 ~~k~imsas~dt~i~lw~lk--Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~ 257 (420)
T KOG2096|consen 198 NAKYIMSASLDTKICLWDLK--GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEP 257 (420)
T ss_pred CceEEEEecCCCcEEEEecC--CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEE
Confidence 45789999999999999997 4455555555555567788999999999999999999964
No 196
>KOG0974|consensus
Probab=98.40 E-value=6e-06 Score=45.56 Aligned_cols=65 Identities=22% Similarity=0.292 Sum_probs=53.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++.-.+++|+.-+.+-+|.... ..+.....+|.+.+..+.++.+++++++.+.|+.+++|++.+
T Consensus 142 s~~~~~i~~gsv~~~iivW~~~~-dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s 206 (967)
T KOG0974|consen 142 SAEELYIASGSVFGEIIVWKPHE-DNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDS 206 (967)
T ss_pred cCcEEEEEeccccccEEEEeccc-cCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeeccc
Confidence 34455788888889999999874 333336789999999999999999999999999999998753
No 197
>KOG1240|consensus
Probab=98.37 E-value=9.8e-06 Score=45.91 Aligned_cols=65 Identities=23% Similarity=0.393 Sum_probs=48.2
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCC------cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLK------TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++.+|++|+.||.|++|+.+... +...++......+..+...+.+..++.++.||.+.+.++.
T Consensus 1058 ~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id 1128 (1431)
T KOG1240|consen 1058 SEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRID 1128 (1431)
T ss_pred CCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEcc
Confidence 3456899999999999999986421 1122333244567788888888899999999999988753
No 198
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.36 E-value=1.1e-05 Score=40.76 Aligned_cols=64 Identities=20% Similarity=0.210 Sum_probs=46.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEE-eCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTA-GFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 67 (68)
+++|++.++.++.|+.+.++|+.+ ...+........ ...+++++++++++.+ ..++.+.++|.+
T Consensus 44 ~s~Dgr~~yv~~rdg~vsviD~~~-~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v~D~~ 108 (369)
T PF02239_consen 44 FSPDGRYLYVANRDGTVSVIDLAT-GKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSVIDAE 108 (369)
T ss_dssp -TT-SSEEEEEETTSEEEEEETTS-SSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEEEETT
T ss_pred ecCCCCEEEEEcCCCeEEEEECCc-ccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeEeccc
Confidence 467899999999999999999988 455555554433 4688999999877755 467899999865
No 199
>KOG2315|consensus
Probab=98.35 E-value=1.1e-05 Score=42.16 Aligned_cols=63 Identities=16% Similarity=0.332 Sum_probs=46.8
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC------CCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF------DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~ 67 (68)
++|.|++++.++.+ |.+-+||..+ ...+..+.... ...+.|+|++.++++++. |..+.+|++.
T Consensus 319 fnp~g~ii~lAGFGNL~G~mEvwDv~n-~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 319 FNPHGNIILLAGFGNLPGDMEVWDVPN-RKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred ECCCCCEEEEeecCCCCCceEEEeccc-hhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 67899999888877 7888999977 55554444332 357789999999988875 4667788763
No 200
>KOG2048|consensus
Probab=98.34 E-value=1.5e-05 Score=42.56 Aligned_cols=66 Identities=20% Similarity=0.415 Sum_probs=49.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccC-CCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGH-SNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++..++.+|.+-.+|.+-+|++.+.-.....+.++ ...+..++|++.+ .+++.+.+|.+.-||+.+
T Consensus 33 ~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~-RLFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 33 YSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGG-RLFSSGLSGSITEWDLHT 99 (691)
T ss_pred EeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCC-eEEeecCCceEEEEeccc
Confidence 45667889999999999999998732233345544 4578899999655 567777899999999753
No 201
>KOG0650|consensus
Probab=98.34 E-value=1.3e-05 Score=42.54 Aligned_cols=45 Identities=22% Similarity=0.374 Sum_probs=37.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD 49 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (68)
.|.|..+++|+.||.+++|.+.+ +.++..+. ....|.+++|+|.+
T Consensus 409 dp~G~wlasGsdDGtvriWEi~T-gRcvr~~~-~d~~I~~vaw~P~~ 453 (733)
T KOG0650|consen 409 DPSGEWLASGSDDGTVRIWEIAT-GRCVRTVQ-FDSEIRSVAWNPLS 453 (733)
T ss_pred cCCcceeeecCCCCcEEEEEeec-ceEEEEEe-ecceeEEEEecCCC
Confidence 35678999999999999999998 67776665 44578999999965
No 202
>KOG3881|consensus
Probab=98.33 E-value=1.3e-05 Score=40.49 Aligned_cols=63 Identities=19% Similarity=0.314 Sum_probs=56.7
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.+.|+++..-+.+++||.++.++|+..+.-.+.++.++...|.++.+.++...+.+..+|.++
T Consensus 216 ~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~ 278 (412)
T KOG3881|consen 216 NYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRG 278 (412)
T ss_pred CceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccC
Confidence 467999999999999999988889999888888999999999999999999999999998763
No 203
>KOG1188|consensus
Probab=98.32 E-value=3e-06 Score=42.04 Aligned_cols=62 Identities=26% Similarity=0.539 Sum_probs=46.3
Q ss_pred CcEEEEeeC----CCCEEEeecCCCCcceE-EeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSD----DTTIALWDARNLKTRVR-TLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~----~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.++.|.. +-.+.+||.+....++. ....|...|..++|+|. ..++++++-||.+.++|..
T Consensus 129 ~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 129 KNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred CCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 345555543 24677899987444333 35678999999999995 5899999999999999975
No 204
>KOG1036|consensus
Probab=98.32 E-value=3.4e-06 Score=41.27 Aligned_cols=54 Identities=26% Similarity=0.420 Sum_probs=42.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
|.|--+.|++|+.||.|.+|+..+ ++.+..+......|..++++.++..++.++
T Consensus 240 Fhp~~~tfaTgGsDG~V~~Wd~~~-rKrl~q~~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 240 FHPIHGTFATGGSDGIVNIWDLFN-RKRLKQLAKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred eccccceEEecCCCceEEEccCcc-hhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence 344456799999999999999987 555556666666789999999998887665
No 205
>KOG1523|consensus
Probab=98.30 E-value=7.9e-06 Score=40.39 Aligned_cols=65 Identities=20% Similarity=0.385 Sum_probs=55.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+++...++.+..+..+.+|...... .+..++..|...+..+.|+|..+.+++|+.|+-..+|..
T Consensus 18 wn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 18 WNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred ecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 45688899999999999999886533 356677889999999999999999999999999999875
No 206
>KOG0644|consensus
Probab=98.29 E-value=5.5e-07 Score=49.03 Aligned_cols=63 Identities=24% Similarity=0.447 Sum_probs=56.0
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
-.+..+++|+.|..+++|...+ ..+...+.+|...+..++.+.++..+++++.|..|++|.++
T Consensus 200 rtg~~Iitgsdd~lvKiwS~et-~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~ 262 (1113)
T KOG0644|consen 200 RTGRYIITGSDDRLVKIWSMET-ARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP 262 (1113)
T ss_pred cccceEeecCccceeeeeeccc-hhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence 3578899999999999999877 67777899999999999988888889999999999999765
No 207
>KOG2139|consensus
Probab=98.28 E-value=1.7e-05 Score=39.96 Aligned_cols=63 Identities=19% Similarity=0.359 Sum_probs=45.2
Q ss_pred ecCcEEEEeeCC-CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDD-TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+|+..+++++.+ ..+.+|+... ...+....-.-..+..+.|+|++.++++...|+..++|+..
T Consensus 205 ~dgt~l~tAS~gsssi~iWdpdt-g~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 205 EDGTILVTASFGSSSIMIWDPDT-GQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred CCCCEEeecccCcceEEEEcCCC-CCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 456566666554 6889999976 33222222334567789999999999999999999999543
No 208
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.27 E-value=5.5e-05 Score=37.12 Aligned_cols=66 Identities=38% Similarity=0.641 Sum_probs=50.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++++..+++++.++.+++|+.............|...+..+.+.|++..+++++.++.+.+|+..
T Consensus 249 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~ 314 (466)
T COG2319 249 FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLE 314 (466)
T ss_pred ECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcC
Confidence 456677888999999999999976333233335677888999999977777778888889999764
No 209
>KOG1645|consensus
Probab=98.26 E-value=1.9e-05 Score=40.18 Aligned_cols=65 Identities=11% Similarity=0.140 Sum_probs=49.9
Q ss_pred eeecC-cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDT-RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
++|.. ..+..++.+..+++.++++ ......+..+ ..+++.+|..+. +.+-+|...|-+.+||+++
T Consensus 201 fSp~~~GLl~~asl~nkiki~dlet-~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 201 FSPFNEGLLGLASLGNKIKIMDLET-SCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred cCccccceeeeeccCceEEEEeccc-ceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 56654 4789999999999999987 4444455555 778999998865 5666777789999999874
No 210
>KOG2321|consensus
Probab=98.26 E-value=1.6e-05 Score=42.09 Aligned_cols=63 Identities=25% Similarity=0.516 Sum_probs=47.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEec------cCC-----CCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQ------GHS-----NWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.-++|++|..+|.+-+||.+. ...+..+. .+. ..|.++.|+.++..++.|+.+|.+.+||++.
T Consensus 186 ~hgLla~Gt~~g~VEfwDpR~-ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa 259 (703)
T KOG2321|consen 186 EHGLLACGTEDGVVEFWDPRD-KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRA 259 (703)
T ss_pred ccceEEecccCceEEEecchh-hhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEccc
Confidence 346789999999999999975 22222221 122 2378999998899999999999999999873
No 211
>KOG1587|consensus
Probab=98.25 E-value=3.7e-06 Score=44.29 Aligned_cols=58 Identities=21% Similarity=0.524 Sum_probs=46.1
Q ss_pred EEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 9 FATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
|.+++ |..+++|.......++..+..+...+..++|+|.. ..++++..+|.+.+||+.
T Consensus 414 fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl 472 (555)
T KOG1587|consen 414 FLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLL 472 (555)
T ss_pred eeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhh
Confidence 34444 89999999873366777777777889999999964 677788889999999975
No 212
>KOG4497|consensus
Probab=98.21 E-value=3.2e-05 Score=38.77 Aligned_cols=60 Identities=18% Similarity=0.405 Sum_probs=46.2
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 67 (68)
..++....++.+.+|++..... ...+.....++..++|+|+++ .+.+..++..+.+|.+.
T Consensus 62 ~ilC~~yk~~~vqvwsl~Qpew-~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~ 122 (447)
T KOG4497|consen 62 HILCVAYKDPKVQVWSLVQPEW-YCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLN 122 (447)
T ss_pred eeeeeeeccceEEEEEeeccee-EEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEec
Confidence 3567888889999999976333 334556677889999999995 55677789999999764
No 213
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.21 E-value=4.2e-06 Score=28.80 Aligned_cols=21 Identities=38% Similarity=0.539 Sum_probs=19.0
Q ss_pred eeecCcEEEEeeCCCCEEEee
Q psy11876 2 IFLDTRVFATCSDDTTIALWD 22 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~ 22 (68)
+.|+++.+++++.|+.+++|+
T Consensus 19 ~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 19 WSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EETTSSEEEEEETTSEEEEEE
T ss_pred EecccccceeeCCCCEEEEEC
Confidence 567889999999999999996
No 214
>KOG1273|consensus
Probab=98.21 E-value=4.6e-05 Score=37.98 Aligned_cols=54 Identities=22% Similarity=0.315 Sum_probs=40.5
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFD 58 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 58 (68)
+++|+.+.+++.|+.+.+||+.. +.+...+. ...+|+...|+|.. +..+..-.+
T Consensus 74 S~dgr~LltsS~D~si~lwDl~~-gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~ 128 (405)
T KOG1273|consen 74 SRDGRKLLTSSRDWSIKLWDLLK-GSPLKRIR-FDSPVWGAQWHPRKRNKCVATIME 128 (405)
T ss_pred cCCCCEeeeecCCceeEEEeccC-CCceeEEE-ccCccceeeeccccCCeEEEEEec
Confidence 67999999999999999999987 45555554 56778888999853 444444333
No 215
>KOG4190|consensus
Probab=98.16 E-value=1.1e-05 Score=42.87 Aligned_cols=60 Identities=27% Similarity=0.460 Sum_probs=47.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCC------cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLK------TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+.+-+++++.|+.+++|.++... .+..+++.|..+++.+.+-.+.+.++++ |+-+.+||.
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDP 811 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDP 811 (1034)
T ss_pred cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeecc
Confidence 45678999999999999997532 2455677899999999888777776655 788999984
No 216
>KOG1064|consensus
Probab=98.14 E-value=7.5e-06 Score=48.09 Aligned_cols=56 Identities=23% Similarity=0.446 Sum_probs=43.9
Q ss_pred eCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 13 SDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.++.+.+||.......-..-.+|..+...+++.|+.+.+++|+.+|.+.+||+++
T Consensus 2312 ~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rq 2367 (2439)
T KOG1064|consen 2312 SDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQ 2367 (2439)
T ss_pred CCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHH
Confidence 44578889987543222223377888899999999999999999999999999863
No 217
>KOG1275|consensus
Probab=98.13 E-value=1.8e-05 Score=43.86 Aligned_cols=63 Identities=22% Similarity=0.412 Sum_probs=51.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC---------CCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF---------DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~ 67 (68)
+-.+++.+.+|...|.|-+.|.+. ...+..+.+|++.+..+.. +++++++|+. |..+.+||++
T Consensus 183 mR~Nnr~lf~G~t~G~V~LrD~~s-~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLR 254 (1118)
T KOG1275|consen 183 MRYNNRNLFCGDTRGTVFLRDPNS-FETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLR 254 (1118)
T ss_pred EEecCcEEEeecccceEEeecCCc-Cceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhh
Confidence 345778899999999999999987 5778899999998887765 7778887764 5668888875
No 218
>KOG1587|consensus
Probab=98.13 E-value=6.8e-05 Score=39.83 Aligned_cols=63 Identities=24% Similarity=0.404 Sum_probs=47.6
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcc-----eEEeccCCCCEEEEEEcCCC--CEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTR-----VRTLQGHSNWVKNIEFSSKD--NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~ 67 (68)
+.+.++.|..+|.|.+|+.+..... ......|..++..+.|.... ..+++++.||.+..|+.+
T Consensus 254 ~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~ 323 (555)
T KOG1587|consen 254 DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTD 323 (555)
T ss_pred CcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeecc
Confidence 5678999999999999999753221 11234578888899987643 458888999999999764
No 219
>KOG2695|consensus
Probab=98.10 E-value=2.6e-05 Score=39.19 Aligned_cols=63 Identities=19% Similarity=0.331 Sum_probs=45.4
Q ss_pred cCcEEEEeeCCCCEEEeecCCC--CcceEEeccCCCCEE--EEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNL--KTRVRTLQGHSNWVK--NIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.+.+++++|.|++||.+.- +..+....+|-+.-. -+...++...+++++.|...++|.++
T Consensus 310 s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~ 376 (425)
T KOG2695|consen 310 SQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD 376 (425)
T ss_pred ccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecc
Confidence 4567889999999999999751 223666777754322 22345566778889999999999875
No 220
>KOG1523|consensus
Probab=98.10 E-value=3.8e-05 Score=38.16 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=52.2
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.|.++.|.+++.|..-++|...... .+...+.-+.....++.|+|.+++++.++..+.+.+|=++
T Consensus 64 ap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 64 APKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred cCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence 4667889999999999999884322 3455566677888999999999999999999999988543
No 221
>KOG4227|consensus
Probab=98.09 E-value=5e-05 Score=38.90 Aligned_cols=66 Identities=20% Similarity=0.372 Sum_probs=50.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC-----CcceEEe-ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL-----KTRVRTL-QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|+.+++++++|+.|..+++|..... .+++... ..|..-|.+++|...++.+.++..++++..-|+.
T Consensus 64 FS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiE 135 (609)
T KOG4227|consen 64 FSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIE 135 (609)
T ss_pred eccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecc
Confidence 4567899999999999999997521 2334333 2355678899999889999999999999887764
No 222
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.08 E-value=8.1e-05 Score=38.23 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=41.9
Q ss_pred eeecCcEEEEe-eCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATC-SDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~ 66 (68)
++||++.++.+ +.++...+|.+.........+..+...+....|+|+++.++ +...++...+|++
T Consensus 255 wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~ 321 (429)
T PRK01742 255 FSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRM 321 (429)
T ss_pred ECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 57899877665 46777776654321223344555555567889999987665 4445677788764
No 223
>KOG1310|consensus
Probab=98.07 E-value=4.7e-05 Score=40.42 Aligned_cols=61 Identities=25% Similarity=0.409 Sum_probs=52.5
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+..+++|+.||...+|+-.+ ......+.+....+.+++-+|....+++.+.|.++++|..
T Consensus 635 rgeyiasgSddgr~fiwek~t-g~i~av~~gdssivnciqghP~~~~latSgiDstiKIwsp 695 (758)
T KOG1310|consen 635 RGEYIASGSDDGRFFIWEKLT-GSILAVIHGDSSIVNCIQGHPRCPTLATSGIDSTIKIWSP 695 (758)
T ss_pred CCCeeeEecCCCceEEeecCC-cceEEEeeCchhheeeccCCCCCceeeeccCccceEEecc
Confidence 457899999999999999887 5666677778888889988888888999999999999974
No 224
>KOG0650|consensus
Probab=98.04 E-value=1.1e-05 Score=42.79 Aligned_cols=63 Identities=19% Similarity=0.283 Sum_probs=53.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
+.|.|..++.|+.|+.+..+|+.-...+.....-|...+..+++++.-.++++++.|+++.++
T Consensus 615 ihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 615 IHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred ecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEE
Confidence 456777899999999999999875455666777888889999999998999999999999887
No 225
>KOG1538|consensus
Probab=98.02 E-value=7.2e-05 Score=40.71 Aligned_cols=63 Identities=16% Similarity=0.379 Sum_probs=52.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+++|.++..|+.|+.+.++.-+ +....+.-....+++.++..|+++.++.|+.||++-.|++
T Consensus 230 Yf~NGEy~LiGGsdk~L~~fTR~--GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 230 YFTNGEYILLGGSDKQLSLFTRD--GVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred eccCCcEEEEccCCCceEEEeec--CeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 36789999999999999988553 4445556567789999999999999999999999987764
No 226
>KOG1334|consensus
Probab=98.00 E-value=5.2e-06 Score=42.95 Aligned_cols=62 Identities=21% Similarity=0.384 Sum_probs=51.5
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
|...++.+|+..|.|-+|+... ...+..+.+...-|+++.=+|--..+++++.|.-|+||..
T Consensus 404 PrsEyVvSGSDCGhIFiW~K~t-~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 404 PRSEYVVSGSDCGHIFIWDKKT-GEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP 465 (559)
T ss_pred CccceEEecCccceEEEEecch-hHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecC
Confidence 5578899999999999999877 5556566666667788887888888999999999999965
No 227
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.99 E-value=0.00023 Score=35.23 Aligned_cols=65 Identities=17% Similarity=0.250 Sum_probs=42.8
Q ss_pred eeecCcEEEE-eeCCCCEEEeecCCCCcce------EEeccCCCCEEEEEEcCCCCEEEEEeC-CCCEEEEeCC
Q psy11876 2 IFLDTRVFAT-CSDDTTIALWDARNLKTRV------RTLQGHSNWVKNIEFSSKDNLLVTAGF-DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 67 (68)
++|+++.+++ ...++.+.+|++.+..... ..... ......+.++|+++.+..... ++.+.+|++.
T Consensus 133 ~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 133 IDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred eCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 5678877754 4455899999986522111 11111 233467899999888766665 7999999864
No 228
>KOG0649|consensus
Probab=97.97 E-value=0.00023 Score=34.58 Aligned_cols=59 Identities=15% Similarity=0.294 Sum_probs=36.4
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCC--------CEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSN--------WVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..+.+|+.||.+++|+.++ .+.+..+..... .-+..++..+..+++++ ....+.+|.++
T Consensus 169 ~qilsG~EDGtvRvWd~kt-~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCG-gGp~lslwhLr 235 (325)
T KOG0649|consen 169 GQILSGAEDGTVRVWDTKT-QKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCG-GGPKLSLWHLR 235 (325)
T ss_pred cceeecCCCccEEEEeccc-cceeEEeccccChhhcCcccCceeEEEeccCceEEec-CCCceeEEecc
Confidence 5689999999999999987 444444443221 11223333344455554 46677788765
No 229
>KOG2111|consensus
Probab=97.96 E-value=0.0002 Score=35.65 Aligned_cols=56 Identities=16% Similarity=0.247 Sum_probs=42.6
Q ss_pred eeCCCCEEEeecCCCCc-ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCC-EEEEeCC
Q psy11876 12 CSDDTTIALWDARNLKT-RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGS-IYTWDIN 67 (68)
Q Consensus 12 ~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~ 67 (68)
|-..|.+.+-++..... +...+.+|...+.+++++.+|..+++++..|+ |++||-+
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~ 212 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTE 212 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcC
Confidence 34447777777654222 35678899999999999999999999999886 6788754
No 230
>KOG1409|consensus
Probab=97.89 E-value=4.1e-05 Score=38.41 Aligned_cols=63 Identities=27% Similarity=0.610 Sum_probs=50.0
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
....+.+|..|..+.+|++.-.........+|...+..+...+--+.+.+++.|+.|.+|++.
T Consensus 208 ~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 208 GQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred CCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 456789999999999999975344455666777777777776666788999999999999875
No 231
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.89 E-value=0.00031 Score=34.78 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=42.3
Q ss_pred eeecCcEEEEeeC-CCCEEEeecCCCCcc---eEEeccCCCCEEEEEEcCCCCEEEEEeC-CCCEEEEeC
Q psy11876 2 IFLDTRVFATCSD-DTTIALWDARNLKTR---VRTLQGHSNWVKNIEFSSKDNLLVTAGF-DGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~ 66 (68)
++|++++++++.. ++.+.+|++...... ...... ......+.++|+++.+..+.. ++.+.+|++
T Consensus 235 ~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~ 303 (330)
T PRK11028 235 ITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEI 303 (330)
T ss_pred ECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEE
Confidence 5688888888754 578999988542211 111111 123457889999877776554 789999975
No 232
>KOG1524|consensus
Probab=97.86 E-value=2.8e-05 Score=41.10 Aligned_cols=57 Identities=25% Similarity=0.423 Sum_probs=46.6
Q ss_pred EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 8 VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.++.++.||...+.+-. .+......+|...+.+-.|+|++.-+++.+.||.+.+|..
T Consensus 77 ~~~i~s~DGkf~il~k~--~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr 133 (737)
T KOG1524|consen 77 TLLICSNDGRFVILNKS--ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR 133 (737)
T ss_pred eEEEEcCCceEEEeccc--chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec
Confidence 57888889988876543 3444456789999999999999999999999999999974
No 233
>KOG4227|consensus
Probab=97.86 E-value=0.00017 Score=37.14 Aligned_cols=65 Identities=31% Similarity=0.546 Sum_probs=51.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC----C------------------cceEEeccCCCCEEEEEEcCCCCEEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL----K------------------TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDG 59 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~----~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (68)
.|.+..-+++|+.+..+.+|.+... + ..+..+.+|..-+..+.|++...++.+.+-..
T Consensus 300 ~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~ 379 (609)
T KOG4227|consen 300 TFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVEN 379 (609)
T ss_pred eeecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhh
Confidence 4556667999999999999998521 1 12335678888888999999988888888899
Q ss_pred CEEEEeC
Q psy11876 60 SIYTWDI 66 (68)
Q Consensus 60 ~i~~~~~ 66 (68)
.+++|..
T Consensus 380 ~~KlWS~ 386 (609)
T KOG4227|consen 380 SFKLWSD 386 (609)
T ss_pred heecccc
Confidence 9999964
No 234
>KOG4532|consensus
Probab=97.82 E-value=0.00065 Score=33.49 Aligned_cols=66 Identities=14% Similarity=0.065 Sum_probs=47.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcce-E-EeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRV-R-TLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.++++++.++.+....|-.|.+....... . .....+..-.+..|+.....++.+..||++.+||++
T Consensus 166 ~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR 233 (344)
T KOG4532|consen 166 YSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVR 233 (344)
T ss_pred EcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEec
Confidence 45677777777777778888876532222 2 222344445677888888899999999999999987
No 235
>KOG2695|consensus
Probab=97.81 E-value=0.00015 Score=36.65 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=46.1
Q ss_pred CcEEEEeeCCCCEEEeecCCC----CcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNL----KTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
++.+..|.++|.|...|++.. .++...+ -|...+.+++.-. .++.+++.+.+|+|.+||.+
T Consensus 264 ~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R 329 (425)
T KOG2695|consen 264 DNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLR 329 (425)
T ss_pred CCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeeh
Confidence 678889999999999998752 2333333 3666677776544 67889999999999999976
No 236
>KOG1963|consensus
Probab=97.79 E-value=0.00058 Score=37.69 Aligned_cols=63 Identities=16% Similarity=0.132 Sum_probs=50.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++++|..+++|+.++.+-+|...+.++ ..+.--...+..+.++|++...+....|..+.+-..
T Consensus 259 fS~~G~~LlSGG~E~VLv~Wq~~T~~k--qfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 259 FSSDGAYLLSGGREGVLVLWQLETGKK--QFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred EecCCceEeecccceEEEEEeecCCCc--ccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence 678999999999999999999987432 223334567889999999998888888988877543
No 237
>KOG4547|consensus
Probab=97.76 E-value=0.00033 Score=37.07 Aligned_cols=61 Identities=26% Similarity=0.431 Sum_probs=46.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-----CCEEE-EEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-----DNLLV-TAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~i~~~~ 65 (68)
++||+.++++++ +.+++|++.+ +..+..+.+|..+|.+++|-.. +.++. +...+..+.+|-
T Consensus 152 is~D~~~l~~as--~~ik~~~~~~-kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~ 218 (541)
T KOG4547|consen 152 ISPDGKILLTAS--RQIKVLDIET-KEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWV 218 (541)
T ss_pred EcCCCCEEEecc--ceEEEEEccC-ceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEE
Confidence 567888899888 4899999988 6778899999999999888654 44443 334456666664
No 238
>KOG2041|consensus
Probab=97.66 E-value=0.00032 Score=38.75 Aligned_cols=63 Identities=21% Similarity=0.313 Sum_probs=50.1
Q ss_pred ecCcEEEEeeCCCCEEEeecCCC-----C---------cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNL-----K---------TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+.++|+.|+.||.+++..+.+. . ..-.+..+|...|.-+.|+.+.+.+.+...+|.|.+|.+
T Consensus 24 ke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWml 100 (1189)
T KOG2041|consen 24 KESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWML 100 (1189)
T ss_pred ccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEee
Confidence 35678999999999999876531 0 112245688899999999999999999999999999965
No 239
>KOG0280|consensus
Probab=97.66 E-value=0.00072 Score=33.59 Aligned_cols=64 Identities=27% Similarity=0.306 Sum_probs=45.5
Q ss_pred ecCcEEEEeeCCCCEEEeecCC-CCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARN-LKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+..++++..+|.+.+-.... .-......+.|+-+.+..+++.. .+.+.+|+.|+.+..||.+
T Consensus 131 ~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R 196 (339)
T KOG0280|consen 131 TSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIR 196 (339)
T ss_pred ccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEec
Confidence 3455677888888887433322 11223356788888888888764 5788999999999999987
No 240
>PRK01742 tolB translocation protein TolB; Provisional
Probab=97.66 E-value=0.0017 Score=33.62 Aligned_cols=61 Identities=20% Similarity=0.195 Sum_probs=37.8
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEE-eCCCCEEEE
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTA-GFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 64 (68)
++|+++.++..+.+ ..+.+|++.. .... ............+|+|+++.++.. ..++...+|
T Consensus 211 wSPDG~~la~~s~~~~~~~i~i~dl~t-g~~~-~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy 275 (429)
T PRK01742 211 WSPDGSKLAYVSFENKKSQLVVHDLRS-GARK-VVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIY 275 (429)
T ss_pred EcCCCCEEEEEEecCCCcEEEEEeCCC-CceE-EEecCCCccCceeECCCCCEEEEEEecCCcEEEE
Confidence 57899888776543 3588899865 2211 122122223467899999877654 467766665
No 241
>KOG4640|consensus
Probab=97.62 E-value=0.001 Score=35.95 Aligned_cols=62 Identities=18% Similarity=0.205 Sum_probs=43.8
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCE-EEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWV-KNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|.-..||.+..+|.+.+.+..- ..+..+.-+...+ .+++|.|+++.++.+-.||++.+-|..
T Consensus 30 P~~dLiA~~t~~gelli~R~n~--qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve 92 (665)
T KOG4640|consen 30 PKMDLIATRTEKGELLIHRLNW--QRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVE 92 (665)
T ss_pred CccchhheeccCCcEEEEEecc--ceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEcc
Confidence 3344677777777777766653 2233444233334 499999999999999999999999875
No 242
>KOG1272|consensus
Probab=97.60 E-value=0.0003 Score=36.72 Aligned_cols=59 Identities=24% Similarity=0.461 Sum_probs=38.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
+.++|++.++.+.|..+++||++... ....... ..+...++++..+ ++.++....+.+|
T Consensus 301 v~~~G~YMaTtG~Dr~~kIWDlR~~~-ql~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~iw 359 (545)
T KOG1272|consen 301 VDRGGRYMATTGLDRKVKIWDLRNFY-QLHTYRT-PHPASNLSLSQKG--LLALSYGDHVQIW 359 (545)
T ss_pred ECCCCcEEeecccccceeEeeecccc-ccceeec-CCCcccccccccc--ceeeecCCeeeee
Confidence 45788999999999999999998733 2223322 2334555665544 3344455666676
No 243
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.57 E-value=0.00048 Score=25.06 Aligned_cols=31 Identities=16% Similarity=0.363 Sum_probs=26.9
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 37 SNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
...+..++|+|...+++.++.+|.+.++.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 3458899999999999999999999998763
No 244
>KOG4532|consensus
Probab=97.56 E-value=0.002 Score=31.92 Aligned_cols=65 Identities=25% Similarity=0.227 Sum_probs=42.5
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcce----EEeccCCCCEEEEEEcCCCC--EEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRV----RTLQGHSNWVKNIEFSSKDN--LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~ 67 (68)
+.+...+|++..||.+.+||.+....+. ..-..|.+.+....|++.+. ++.-.-.-+.+.+.|++
T Consensus 212 s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R 282 (344)
T KOG4532|consen 212 SENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR 282 (344)
T ss_pred ccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence 3456689999999999999997543322 22334667788888887542 33333234677777765
No 245
>KOG1517|consensus
Probab=97.56 E-value=0.00074 Score=38.69 Aligned_cols=59 Identities=24% Similarity=0.379 Sum_probs=37.2
Q ss_pred EEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEc-CCCCEEEEEeCCCCEEEEeCC
Q psy11876 8 VFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFS-SKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.+++....|++||.... ....-+ .+....+..+.-. ..+..++.|..||.+++||.+
T Consensus 1179 ~Ll~tGd~r~IRIWDa~~E-~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R 1239 (1387)
T KOG1517|consen 1179 HLLVTGDVRSIRIWDAHKE-QVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRR 1239 (1387)
T ss_pred eEEecCCeeEEEEEecccc-eeEeecccCCCccceeecccccCCceEEEeecCCceEEeecc
Confidence 4444554789999999763 222222 2223333444322 246899999999999999976
No 246
>KOG2321|consensus
Probab=97.53 E-value=0.00098 Score=35.87 Aligned_cols=55 Identities=13% Similarity=0.229 Sum_probs=41.1
Q ss_pred eeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 12 CSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 12 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.....++-+++.. +.-+..+......++.+..++.+.++++|+.+|.+-.||.+
T Consensus 151 ~gsg~evYRlNLEq-GrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR 205 (703)
T KOG2321|consen 151 VGSGSEVYRLNLEQ-GRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR 205 (703)
T ss_pred eecCcceEEEEccc-cccccccccccccceeeeecCccceEEecccCceEEEecch
Confidence 33334555556655 44455566666788999999999999999999999999976
No 247
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.47 E-value=0.0019 Score=33.42 Aligned_cols=64 Identities=17% Similarity=0.133 Sum_probs=38.4
Q ss_pred eeecCcEEE-EeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe-CCCCEEEEe
Q psy11876 2 IFLDTRVFA-TCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 65 (68)
++||++.++ +.+.++...+|.+.........+..+........|+|+++.++..+ .++...+|.
T Consensus 247 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~ 312 (427)
T PRK02889 247 WSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYR 312 (427)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEE
Confidence 578887765 5677777777765432222334443433345667999998766444 345566664
No 248
>KOG4547|consensus
Probab=97.45 E-value=0.0026 Score=33.95 Aligned_cols=59 Identities=19% Similarity=0.248 Sum_probs=47.4
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
-..|.+++.|+.+..|+... ...+..+.+....+.+++.+|++..+.++ .++|.+||+.
T Consensus 114 ~~ciyS~~ad~~v~~~~~~~-~~~~~~~~~~~~~~~sl~is~D~~~l~~a--s~~ik~~~~~ 172 (541)
T KOG4547|consen 114 LGCIYSVGADLKVVYILEKE-KVIIRIWKEQKPLVSSLCISPDGKILLTA--SRQIKVLDIE 172 (541)
T ss_pred cCceEecCCceeEEEEeccc-ceeeeeeccCCCccceEEEcCCCCEEEec--cceEEEEEcc
Confidence 46789999999999999877 56677777777778899999998777665 4678888865
No 249
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.42 E-value=0.0041 Score=32.25 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=39.5
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~ 65 (68)
++||++.++..+.+ ..+.+|++.. +.. ..+...........|+|+++.++ +.+.++...+|.
T Consensus 203 wSPDG~~la~~s~~~~~~~I~~~dl~~-g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~ 268 (427)
T PRK02889 203 WSPDGTKLAYVSFESKKPVVYVHDLAT-GRR-RVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYT 268 (427)
T ss_pred EcCCCCEEEEEEccCCCcEEEEEECCC-CCE-EEeecCCCCccceEECCCCCEEEEEEccCCCceEEE
Confidence 57899887766543 3478888865 322 22332334445788999987665 566777766664
No 250
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.41 E-value=0.0026 Score=31.39 Aligned_cols=32 Identities=25% Similarity=0.516 Sum_probs=28.7
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 36 HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
....+..+.++|++..+++...+|.+.+|++.
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iP 259 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIP 259 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecC
Confidence 35678899999999999999999999999875
No 251
>KOG4497|consensus
Probab=97.41 E-value=0.0018 Score=32.93 Aligned_cols=64 Identities=23% Similarity=0.367 Sum_probs=43.8
Q ss_pred CeeecCcEEEEeeCC--CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 1 MIFLDTRVFATCSDD--TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++++|+.++++-... +.+.+|+++..+ .........+|..+.|.|....++.+.....+.+|..
T Consensus 325 afs~Ds~y~aTrnd~~PnalW~Wdlq~l~--l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~p 390 (447)
T KOG4497|consen 325 AFSCDSTYAATRNDKYPNALWLWDLQNLK--LHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAP 390 (447)
T ss_pred eecCCceEEeeecCCCCceEEEEechhhh--hhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcC
Confidence 356777777776554 566788887622 2233345667889999998766777766777888864
No 252
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.35 E-value=0.006 Score=32.55 Aligned_cols=65 Identities=14% Similarity=0.184 Sum_probs=48.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCC----CEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDG----SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~ 67 (68)
.+++|..++.+.....+.+.++.+ +.....-.....-+..+.|+|++++++-+-.++ .|+++|+.
T Consensus 409 vs~dGK~~vvaNdr~el~vididn-gnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 409 VSPDGKKVVVANDRFELWVIDIDN-GNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred EcCCCcEEEEEcCceEEEEEEecC-CCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecC
Confidence 467888888888888888888887 454444445566788999999999988765554 46677653
No 253
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.34 E-value=0.0094 Score=34.51 Aligned_cols=65 Identities=15% Similarity=0.144 Sum_probs=45.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec-------------cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ-------------GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.++++.+++-..++.|++|+... ........ +.-.....+++.++++.+++-+.++.|++||+.
T Consensus 811 vd~dG~LYVADs~N~rIrviD~~t-g~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~ 888 (1057)
T PLN02919 811 CAKDGQIYVADSYNHKIKKLDPAT-KRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN 888 (1057)
T ss_pred EeCCCcEEEEECCCCEEEEEECCC-CeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 456677777777788999999865 22221110 111245678889999888888889999999975
No 254
>KOG0322|consensus
Probab=97.24 E-value=0.00045 Score=33.88 Aligned_cols=60 Identities=13% Similarity=0.247 Sum_probs=44.6
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEec-cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQ-GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..+.+|...|.+.+|.+.+ ......+. .+...+..++..|+ ..+.+.+.|..+.+|++.
T Consensus 25 ~~rL~sg~~~G~V~~w~lqt-~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia 85 (323)
T KOG0322|consen 25 NERLMSGLSVGIVKMWVLQT-ERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIA 85 (323)
T ss_pred chhhhcccccceEEEEEeec-CccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEcc
Confidence 34588899999999999988 45555565 45566777776665 456777889999999763
No 255
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.20 E-value=0.008 Score=30.84 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=41.3
Q ss_pred cEE-EEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 7 RVF-ATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 7 ~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+++ ++-..++.+.+.|..+ ......+.........+.++++++++...+.|+.+.++|+.+
T Consensus 6 ~l~~V~~~~~~~v~viD~~t-~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~ 67 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGAT-NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLAT 67 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT--SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTS
T ss_pred cEEEEEecCCCEEEEEECCC-CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCc
Confidence 444 4455578999999987 555666665444334567899999888888999999999753
No 256
>KOG1409|consensus
Probab=97.15 E-value=0.0091 Score=30.57 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=44.8
Q ss_pred EEEeeCCCCEEEeecCC-CCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 9 FATCSDDTTIALWDARN-LKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
...|...+.+....... ...++..+.+|...+.+.+|.+....+.++..|..+.+||+
T Consensus 168 ~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdi 226 (404)
T KOG1409|consen 168 AFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDI 226 (404)
T ss_pred EEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEec
Confidence 34555556666555432 23567778899999999999999999999999999999986
No 257
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.14 E-value=0.0062 Score=34.21 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=41.3
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
...|+.|+.+|.|++|+-.. .+....+.+...+|..+..+.+|+++++-+ +..+.+.
T Consensus 588 ~G~iavgs~~G~IRLyd~~g-~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi 644 (794)
T PF08553_consen 588 DGYIAVGSNKGDIRLYDRLG-KRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLI 644 (794)
T ss_pred CceEEEEeCCCcEEeecccc-hhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEE
Confidence 46799999999999998533 334444556678999999999998876655 3334443
No 258
>KOG1334|consensus
Probab=97.13 E-value=0.00084 Score=35.37 Aligned_cols=63 Identities=27% Similarity=0.345 Sum_probs=46.2
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEe
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~ 65 (68)
...|..+++|+.|..+-+|++...........+|..-+.-..|.|. .+.+++++.|+++++-.
T Consensus 151 N~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 151 NQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred cccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 3457789999999999999997644444445677776666667773 36778888898887643
No 259
>KOG0309|consensus
Probab=97.12 E-value=0.0027 Score=35.45 Aligned_cols=61 Identities=25% Similarity=0.510 Sum_probs=50.5
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..+++++.|..+..|+++....+++....-......++|+.....+...+....+.+||.+
T Consensus 128 dVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r 188 (1081)
T KOG0309|consen 128 DVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLR 188 (1081)
T ss_pred cceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEecc
Confidence 4689999999999999998778887777666666788998877677777888999999876
No 260
>KOG2139|consensus
Probab=97.07 E-value=0.012 Score=30.45 Aligned_cols=56 Identities=16% Similarity=0.128 Sum_probs=38.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEE-EEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLL-VTAGFD 58 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 58 (68)
.+||+..+..+..|..-++|+... .+...........+....|+|+++.+ .+++..
T Consensus 246 wSPdgd~lfaAt~davfrlw~e~q-~wt~erw~lgsgrvqtacWspcGsfLLf~~sgs 302 (445)
T KOG2139|consen 246 WSPDGDVLFAATCDAVFRLWQENQ-SWTKERWILGSGRVQTACWSPCGSFLLFACSGS 302 (445)
T ss_pred EcCCCCEEEEecccceeeeehhcc-cceecceeccCCceeeeeecCCCCEEEEEEcCC
Confidence 579999999999999999996543 22222333344478888999988644 444433
No 261
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.05 E-value=0.01 Score=29.42 Aligned_cols=65 Identities=20% Similarity=0.269 Sum_probs=42.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC-CcceEEeccCCC---CEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL-KTRVRTLQGHSN---WVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.||+.+|.- .|..+-+...+.. ...+.++....+ +=..++|+|++..++.+...|+|.++|+-
T Consensus 5 ~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~ 73 (282)
T PF15492_consen 5 LSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM 73 (282)
T ss_pred ecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecc
Confidence 45567655544 4667777666542 223334433222 12588999999999999999999999863
No 262
>KOG4714|consensus
Probab=97.04 E-value=0.0021 Score=31.68 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=23.9
Q ss_pred CEEEEEEcCC-CCEEEEEeCCCCEEEEeCCC
Q psy11876 39 WVKNIEFSSK-DNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 39 ~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 68 (68)
.+.+++-+|. ++.+.+++.+|.+.+||.++
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn 211 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARN 211 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEccc
Confidence 3788888885 46777888899999999863
No 263
>KOG2079|consensus
Probab=97.00 E-value=0.0022 Score=36.85 Aligned_cols=61 Identities=16% Similarity=0.259 Sum_probs=44.2
Q ss_pred EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 8 VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.++.|+..|.+...+...+-.+...-.....+|.+++++.+++.+..|-.+|.+.+||++.
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~ 161 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHR 161 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccC
Confidence 4677777777777666542222223333467899999999999999999999999999863
No 264
>KOG3621|consensus
Probab=96.98 E-value=0.0034 Score=34.49 Aligned_cols=64 Identities=13% Similarity=0.129 Sum_probs=45.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEE-----eccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRT-----LQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
++++..+.+.|+..+.|.++.......+... -..|...|.+++|++++..+.+|...|++..-.
T Consensus 84 vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~ 152 (726)
T KOG3621|consen 84 VSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTE 152 (726)
T ss_pred ecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEE
Confidence 3456667788888899998877542111111 123577899999999999999999999887543
No 265
>KOG3617|consensus
Probab=96.94 E-value=0.0028 Score=36.04 Aligned_cols=59 Identities=15% Similarity=0.268 Sum_probs=47.0
Q ss_pred EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 8 VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.++.|...|.+.+|...+ ...-.....|..++..+.|++++..++++...|.+.+|.+.
T Consensus 73 vLa~gwe~g~~~v~~~~~-~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 73 VLAQGWEMGVSDVQKTNT-TETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred HHhhccccceeEEEecCC-ceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 467777778888888765 33333445688899999999999999999999999999653
No 266
>KOG1240|consensus
Probab=96.93 E-value=0.013 Score=34.48 Aligned_cols=65 Identities=12% Similarity=0.282 Sum_probs=44.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEcC---CCCEEEE-Ee-CCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFSS---KDNLLVT-AG-FDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~-~~-~~~~i~~~~~~ 67 (68)
++|.++.++.|...|.+-+||++. +.++... ..+..++..+..+| +....++ +. ..+.+.+|++.
T Consensus 1203 idp~~~WlviGts~G~l~lWDLRF-~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~ 1273 (1431)
T KOG1240|consen 1203 IDPWCNWLVIGTSRGQLVLWDLRF-RVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNME 1273 (1431)
T ss_pred ecCCceEEEEecCCceEEEEEeec-CceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecc
Confidence 567788999999999999999987 4444433 34445666666655 2233433 33 45789999875
No 267
>PRK04922 tolB translocation protein TolB; Provisional
Probab=96.91 E-value=0.018 Score=30.01 Aligned_cols=64 Identities=16% Similarity=0.080 Sum_probs=35.3
Q ss_pred eeecCcEEEEee-CCCC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC-C--CEEEEeCC
Q psy11876 2 IFLDTRVFATCS-DDTT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD-G--SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~i~~~~~~ 67 (68)
++||++.++..+ .++. +..++... .. ...+..........+|+|+++.++....+ + .+.+|+..
T Consensus 299 ~spDG~~l~f~sd~~g~~~iy~~dl~~-g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 299 WAPDGKSIYFTSDRGGRPQIYRVAASG-GS-AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred ECCCCCEEEEEECCCCCceEEEEECCC-CC-eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 567887766554 4455 44444433 22 22222222333467899999877655433 2 57788764
No 268
>PRK05137 tolB translocation protein TolB; Provisional
Probab=96.90 E-value=0.019 Score=29.98 Aligned_cols=63 Identities=17% Similarity=0.195 Sum_probs=36.6
Q ss_pred eeecCcEE-EEeeCCCC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe-CCC--CEEEEeC
Q psy11876 2 IFLDTRVF-ATCSDDTT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDG--SIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~i~~~~~ 66 (68)
++||++.+ ++.+.++. +.+++... . ....+..+........|+|+++.++..+ .++ .+.+++.
T Consensus 253 ~SPDG~~la~~~~~~g~~~Iy~~d~~~-~-~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 253 FSPDGRKVVMSLSQGGNTDIYTMDLRS-G-TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred ECCCCCEEEEEEecCCCceEEEEECCC-C-ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 57888765 45565655 44556654 2 2334444444445678999988766554 333 4555554
No 269
>KOG1064|consensus
Probab=96.86 E-value=0.0061 Score=37.26 Aligned_cols=61 Identities=16% Similarity=0.299 Sum_probs=47.8
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
....++|+.||.+++|.... ...+..+ ......+..+.++.+|..+..+..||.+.+|...
T Consensus 2220 ~~~Yltgs~dgsv~~~~w~~-~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~ 2281 (2439)
T KOG1064|consen 2220 DPYYLTGSQDGSVRMFEWGH-GQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS 2281 (2439)
T ss_pred CceEEecCCCceEEEEeccC-CCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC
Confidence 35678999999999999876 3444443 3344677888899999999999999999999753
No 270
>PRK03629 tolB translocation protein TolB; Provisional
Probab=96.83 E-value=0.022 Score=29.76 Aligned_cols=61 Identities=11% Similarity=0.071 Sum_probs=36.9
Q ss_pred eeecCcEEEEe-eCCC--CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC-CCCEEEE
Q psy11876 2 IFLDTRVFATC-SDDT--TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF-DGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~ 64 (68)
++||++.++.. +.++ .+.+|+... .. ...+......+....|+|+++.++..+. ++...+|
T Consensus 250 ~SPDG~~La~~~~~~g~~~I~~~d~~t-g~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy 314 (429)
T PRK03629 250 FSPDGSKLAFALSKTGSLNLYVMDLAS-GQ-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVY 314 (429)
T ss_pred ECCCCCEEEEEEcCCCCcEEEEEECCC-CC-EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEE
Confidence 57898877654 4444 466777765 22 3333334445567899999987765543 4444555
No 271
>KOG1354|consensus
Probab=96.78 E-value=0.019 Score=29.57 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=44.5
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCc----ceEEeccC------------CCCEEEEEEcCCC--CEEEEEeCCCCEEEE
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKT----RVRTLQGH------------SNWVKNIEFSSKD--NLLVTAGFDGSIYTW 64 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~------------~~~~~~~~~~~~~--~~~~~~~~~~~i~~~ 64 (68)
...|..+++|..+|.|-++.-..... ....++.| ...+..+.|.+++ ..+...+.|.++.+|
T Consensus 34 ~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdktiKlW 113 (433)
T KOG1354|consen 34 DHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIKLW 113 (433)
T ss_pred ecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCcceeee
Confidence 34688999999999999886543221 12223333 2456788888753 567777889999999
Q ss_pred eCC
Q psy11876 65 DIN 67 (68)
Q Consensus 65 ~~~ 67 (68)
.++
T Consensus 114 Ki~ 116 (433)
T KOG1354|consen 114 KIR 116 (433)
T ss_pred eee
Confidence 764
No 272
>PRK04922 tolB translocation protein TolB; Provisional
Probab=96.73 E-value=0.027 Score=29.41 Aligned_cols=64 Identities=23% Similarity=0.237 Sum_probs=38.7
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCC--CEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDG--SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~~ 67 (68)
.+|+++.++..+.+ ..+.+|++.. ... ..+...........|+|+++.++ +.+.++ .|.+||+.
T Consensus 211 wSpDg~~la~~s~~~~~~~l~~~dl~~-g~~-~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~ 280 (433)
T PRK04922 211 WSPDGKKLAYVSFERGRSAIYVQDLAT-GQR-ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLG 280 (433)
T ss_pred CCCCCCEEEEEecCCCCcEEEEEECCC-CCE-EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECC
Confidence 46888877766533 3577788765 222 22333333344678999987664 445444 57777764
No 273
>KOG2066|consensus
Probab=96.72 E-value=0.022 Score=32.08 Aligned_cols=58 Identities=17% Similarity=0.337 Sum_probs=40.7
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC-----CCEEEEEeCCCCEEEEe
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK-----DNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~ 65 (68)
+|..+++|+.||.+.+....+ .....+ .....++.+++++|+ .+.+++|+..| +.++.
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~-~~~~~~-~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~e 144 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFT-DDEITQ-YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSE 144 (846)
T ss_pred CCceEEEecCCCcEEEeeccC-Ccccee-EecCCcceeEEeccchhhhhhhheeecCcce-EEEeh
Confidence 578999999999999877755 222222 234567788888885 46778888777 65553
No 274
>KOG0309|consensus
Probab=96.63 E-value=0.0016 Score=36.22 Aligned_cols=59 Identities=29% Similarity=0.541 Sum_probs=45.4
Q ss_pred EEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 9 FATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+.+..+.+.+|+.+....+.....+|...+..+.+.. ....+.+++.|+++..|++.
T Consensus 173 vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~ 232 (1081)
T KOG0309|consen 173 VLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS 232 (1081)
T ss_pred hhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccc
Confidence 444556678899999876677777888877777877765 34567888899999999975
No 275
>PRK03629 tolB translocation protein TolB; Provisional
Probab=96.54 E-value=0.039 Score=28.88 Aligned_cols=66 Identities=15% Similarity=0.156 Sum_probs=35.9
Q ss_pred eeecCcEEEEeeC-CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC---CCEEEEeCC
Q psy11876 2 IFLDTRVFATCSD-DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD---GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~ 67 (68)
++|+++.++..+. ++...+|.+.........+...........|+|+++.++....+ ..+.+||+.
T Consensus 294 wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~ 363 (429)
T PRK03629 294 WFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 363 (429)
T ss_pred ECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECC
Confidence 5788887755554 44555664432111222332233334567899998877655433 346667754
No 276
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=96.48 E-value=0.04 Score=28.35 Aligned_cols=64 Identities=22% Similarity=0.242 Sum_probs=38.5
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCC--CEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDG--SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~~ 67 (68)
++|+++.++....+ ..+.+|++.. ... ..............|+|+++.++ +...++ .+.+|++.
T Consensus 197 ~Spdg~~la~~~~~~~~~~i~v~d~~~-g~~-~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~ 266 (417)
T TIGR02800 197 WSPDGQKLAYVSFESGKPEIYVQDLAT-GQR-EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLD 266 (417)
T ss_pred CCCCCCEEEEEEcCCCCcEEEEEECCC-CCE-EEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECC
Confidence 46788877766543 3677888865 222 22223334455678999987654 444443 57777654
No 277
>KOG2079|consensus
Probab=96.45 E-value=0.035 Score=32.49 Aligned_cols=58 Identities=19% Similarity=0.297 Sum_probs=39.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCE---EEEEEcCCCCEEEEEeCCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWV---KNIEFSSKDNLLVTAGFDGS 60 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 60 (68)
++.+|..++.|-.+|.|.+||... ..+...+..+..+. -.+.+..++..+.++...|.
T Consensus 138 fn~dg~~l~~G~~~G~V~v~D~~~-~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 138 FNQDGSLLLAGLGDGHVTVWDMHR-AKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred ecCCCceeccccCCCcEEEEEccC-CcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 566889999999999999999976 45555555554433 33334445556777766665
No 278
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=96.44 E-value=0.043 Score=28.23 Aligned_cols=64 Identities=22% Similarity=0.257 Sum_probs=36.5
Q ss_pred eeecCcEEEEee-CCCC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCC---CEEEEeCC
Q psy11876 2 IFLDTRVFATCS-DDTT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDG---SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~ 67 (68)
++++++.++..+ ..+. +.+++... .. ...+..+........|+|++..++....++ .+.++|+.
T Consensus 285 ~s~dg~~l~~~s~~~g~~~iy~~d~~~-~~-~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~ 354 (417)
T TIGR02800 285 WSPDGKSIAFTSDRGGSPQIYMMDADG-GE-VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD 354 (417)
T ss_pred ECCCCCEEEEEECCCCCceEEEEECCC-CC-EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC
Confidence 456777665544 3443 45555543 22 223333334456778999988877766554 56666653
No 279
>PRK00178 tolB translocation protein TolB; Provisional
Probab=96.43 E-value=0.046 Score=28.43 Aligned_cols=64 Identities=19% Similarity=0.194 Sum_probs=36.6
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCC--CEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDG--SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~~ 67 (68)
.+|+++.++..+.+ ..+.++++.. +.. ..+...........|+|+++.++ +...++ .+.++|..
T Consensus 206 wSpDG~~la~~s~~~~~~~l~~~~l~~-g~~-~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~ 275 (430)
T PRK00178 206 WSPDGKRIAYVSFEQKRPRIFVQNLDT-GRR-EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLA 275 (430)
T ss_pred ECCCCCEEEEEEcCCCCCEEEEEECCC-CCE-EEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECC
Confidence 46888877655433 3466777765 222 22222233344678999987665 444444 46666654
No 280
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.37 E-value=0.046 Score=27.76 Aligned_cols=65 Identities=22% Similarity=0.323 Sum_probs=41.5
Q ss_pred eeecCcEEEEeeCC-CCEEEeecCCC-Cc--ceEEeccCCCCEEEEEEcCCCCEEEEEe-CCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDD-TTIALWDARNL-KT--RVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-~~v~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 66 (68)
++|++++++++.+. ..|.++++... +. .+............+.++|+++++..+. .++.+.+|++
T Consensus 252 ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 252 ISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp E-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred EecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence 67899888777655 56888998431 11 2222333344468899999998777665 5578888864
No 281
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.30 E-value=0.091 Score=30.47 Aligned_cols=61 Identities=13% Similarity=0.207 Sum_probs=43.0
Q ss_pred eecCcEEEEeeCCCCEEEe----ecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 3 FLDTRVFATCSDDTTIALW----DARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
.++...++.+..+|.+.+. +... ......-.-..++.+++|+|++..++..+.++++.+..
T Consensus 84 l~d~~~l~~~~~~Gdi~~~~~~~~~~~--~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt 148 (928)
T PF04762_consen 84 LADSESLCIALASGDIILVREDPDPDE--DEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT 148 (928)
T ss_pred ccCCCcEEEEECCceEEEEEccCCCCC--ceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe
Confidence 3456678888888888887 3322 12222233466899999999999998888888887664
No 282
>PRK01029 tolB translocation protein TolB; Provisional
Probab=96.27 E-value=0.062 Score=28.26 Aligned_cols=66 Identities=12% Similarity=0.048 Sum_probs=37.8
Q ss_pred eeecCcEEEEee-CCCCEEEeecCC--CCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC---CCEEEEeCC
Q psy11876 2 IFLDTRVFATCS-DDTTIALWDARN--LKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD---GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~ 67 (68)
++||++.|+..+ .++...+|.... .......+......+....|+|+++.++....+ ..+.+||..
T Consensus 288 wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~ 359 (428)
T PRK01029 288 FSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLA 359 (428)
T ss_pred ECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 578887665444 556555665421 112223333333445677899999877655432 357777754
No 283
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.26 E-value=0.054 Score=27.44 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=39.6
Q ss_pred CeeecCcEEEEeeCC-----CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEE
Q psy11876 1 MIFLDTRVFATCSDD-----TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTA 55 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (68)
++++|++.+++.-.| |.|-+|+.......+..+..+.-..+-+.+.|++..++.+
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVA 116 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence 478889888876555 7889999984244566677776667888889988554443
No 284
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.23 E-value=0.057 Score=27.42 Aligned_cols=56 Identities=23% Similarity=0.304 Sum_probs=41.8
Q ss_pred CeeecCcEEEEeeCC-----CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe
Q psy11876 1 MIFLDTRVFATCSDD-----TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
++++|+.+++..-.| |.|-+|+.+..-..+..+..|.-..+.+.|.++++.++...
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 478889888876655 67889998753344556777877788899999998776553
No 285
>KOG2444|consensus
Probab=96.20 E-value=0.039 Score=26.83 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=37.1
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCC-CCEEEEEEcCCCCEEEEE--eCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHS-NWVKNIEFSSKDNLLVTA--GFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~ 67 (68)
++..+++..++.++.|++... ......-.|. ........+.....+... +.+..+..|++.
T Consensus 114 ~~~~c~~~~dg~ir~~n~~p~-k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 114 SSLGCVGAQDGRIRACNIKPN-KVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred cceeEEeccCCceeeeccccC-ceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 347889999999999998763 3333333343 333333344444555555 677777788754
No 286
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=95.99 E-value=0.085 Score=27.27 Aligned_cols=65 Identities=12% Similarity=0.195 Sum_probs=43.9
Q ss_pred eeecCcEEEEeeC----------CCCEEEeecCCCCcceEEeccC-------CCCEEEEEEcCCCCEEEEEeC--CCCEE
Q psy11876 2 IFLDTRVFATCSD----------DTTIALWDARNLKTRVRTLQGH-------SNWVKNIEFSSKDNLLVTAGF--DGSIY 62 (68)
Q Consensus 2 ~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~i~ 62 (68)
++||++.++.+.. +..+.+||..+ ......+..- ......++++++++.+..... +..+.
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t-~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~ 131 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT-HLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG 131 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECcc-CcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence 6788887777666 67899999987 4444444321 112347788999987776653 57788
Q ss_pred EEeCC
Q psy11876 63 TWDIN 67 (68)
Q Consensus 63 ~~~~~ 67 (68)
+.|+.
T Consensus 132 VvD~~ 136 (352)
T TIGR02658 132 VVDLE 136 (352)
T ss_pred EEECC
Confidence 87764
No 287
>KOG3621|consensus
Probab=95.89 E-value=0.029 Score=31.20 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=44.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+...+..++.|+.-|.+.+|+-....-...+..+....+....+++...+++.++..+.+.++.+.
T Consensus 41 ~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~ 106 (726)
T KOG3621|consen 41 VDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLN 106 (726)
T ss_pred eecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhh
Confidence 345677899999999999988754222222333344445566677777788888888888887643
No 288
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=95.76 E-value=0.046 Score=29.72 Aligned_cols=32 Identities=28% Similarity=0.234 Sum_probs=28.0
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 36 HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
....+.+.+++|....++.|+.||.+.+||..
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~ 289 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTT 289 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcC
Confidence 45667888999999999999999999999964
No 289
>PRK00178 tolB translocation protein TolB; Provisional
Probab=95.72 E-value=0.12 Score=26.96 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=34.8
Q ss_pred eeecCcEEE-EeeCCC--CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe-CCC--CEEEEeC
Q psy11876 2 IFLDTRVFA-TCSDDT--TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDG--SIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~i~~~~~ 66 (68)
++||++.++ +.+.++ .+.+++... . ....+..+........|+|++..++..+ .++ .+.+++.
T Consensus 250 ~SpDG~~la~~~~~~g~~~Iy~~d~~~-~-~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~ 318 (430)
T PRK00178 250 WSPDGSKLAFVLSKDGNPEIYVMDLAS-R-QLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNV 318 (430)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCC-C-CeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence 578887665 455555 456667654 2 2233333433345668999987665443 333 3444443
No 290
>KOG2395|consensus
Probab=95.59 E-value=0.12 Score=28.32 Aligned_cols=50 Identities=14% Similarity=0.223 Sum_probs=36.5
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
+..|+.|+.+|.|++|+- ........+.+...+|..+....++.++++-+
T Consensus 441 sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc 490 (644)
T KOG2395|consen 441 SGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC 490 (644)
T ss_pred CceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec
Confidence 467999999999999986 32333444566677888888888887766554
No 291
>PRK04792 tolB translocation protein TolB; Provisional
Probab=95.52 E-value=0.16 Score=26.95 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=33.7
Q ss_pred eeecCcEEE-EeeCCCC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe-CCCCEEEE
Q psy11876 2 IFLDTRVFA-TCSDDTT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~ 64 (68)
++||++.++ +.+.++. +.+++... . .......+........|+|+++.++..+ .++...+|
T Consensus 269 wSPDG~~La~~~~~~g~~~Iy~~dl~t-g-~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy 333 (448)
T PRK04792 269 FSPDGKKLALVLSKDGQPEIYVVDIAT-K-ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIY 333 (448)
T ss_pred ECCCCCEEEEEEeCCCCeEEEEEECCC-C-CeEECccCCCCccceEECCCCCEEEEEECCCCCceEE
Confidence 578887665 4566665 44555544 2 2333333333445678999987665443 34443333
No 292
>PRK04792 tolB translocation protein TolB; Provisional
Probab=95.49 E-value=0.16 Score=26.91 Aligned_cols=63 Identities=25% Similarity=0.242 Sum_probs=35.2
Q ss_pred eeecCcEEEEeeC-CC--CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCCC--EEEEeC
Q psy11876 2 IFLDTRVFATCSD-DT--TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDGS--IYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~-~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--i~~~~~ 66 (68)
++||++.++..+. ++ .+.++++.. ... ..............|+|+++.++ +.+.++. |.++|+
T Consensus 225 wSPDG~~La~~s~~~g~~~L~~~dl~t-g~~-~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl 293 (448)
T PRK04792 225 WSPDGRKLAYVSFENRKAEIFVQDIYT-QVR-EKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDI 293 (448)
T ss_pred ECCCCCEEEEEEecCCCcEEEEEECCC-CCe-EEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEEC
Confidence 5788887765543 33 466667654 222 22222222234678999987665 4555564 555554
No 293
>PRK05137 tolB translocation protein TolB; Provisional
Probab=95.45 E-value=0.16 Score=26.67 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=33.0
Q ss_pred CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC---CCCEEEEeCC
Q psy11876 17 TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF---DGSIYTWDIN 67 (68)
Q Consensus 17 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~ 67 (68)
.+.+++... .....+..+...+...+|+|+++.++..+. +..+.+||+.
T Consensus 183 ~l~~~d~dg--~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~ 234 (435)
T PRK05137 183 RLAIMDQDG--ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLE 234 (435)
T ss_pred EEEEECCCC--CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECC
Confidence 455555543 334455566777889999999987766543 3678888864
No 294
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=95.23 E-value=0.23 Score=27.08 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=40.1
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC------CCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF------DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~ 67 (68)
|+|++++++.++.+ |.+-+|+..........+.+.. ..-..|+|++..+.+... |..+.+||+.
T Consensus 323 fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~ 395 (561)
T COG5354 323 FSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVY 395 (561)
T ss_pred ccCcccEEEEecCCccccceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEEec
Confidence 67888888887766 5667777654212222333222 245578999887766543 6678899864
No 295
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.22 E-value=0.33 Score=28.80 Aligned_cols=66 Identities=14% Similarity=0.225 Sum_probs=40.8
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCCcceEE------------eccC--------CCCEEEEEEcCCCCEEEEEeCCCC
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLKTRVRT------------LQGH--------SNWVKNIEFSSKDNLLVTAGFDGS 60 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~------------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 60 (68)
+++++. ++++-..++.|++|+.......... +-.. -.....+++.+++..+++-..++.
T Consensus 747 vspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~r 826 (1057)
T PLN02919 747 LSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHK 826 (1057)
T ss_pred EeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCE
Confidence 456766 4455555688999987652211100 0000 012346778888888888888999
Q ss_pred EEEEeCC
Q psy11876 61 IYTWDIN 67 (68)
Q Consensus 61 i~~~~~~ 67 (68)
|++||..
T Consensus 827 IrviD~~ 833 (1057)
T PLN02919 827 IKKLDPA 833 (1057)
T ss_pred EEEEECC
Confidence 9999864
No 296
>KOG2114|consensus
Probab=95.13 E-value=0.12 Score=29.72 Aligned_cols=64 Identities=19% Similarity=0.273 Sum_probs=38.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCC-EEEEEEcCCCCEEEEEeCCC-----CEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNW-VKNIEFSSKDNLLVTAGFDG-----SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~ 67 (68)
+++.+..++.|+.+|.|.+++-.- .....+.++... +..+....+...+++.+.|. .+++|++.
T Consensus 31 ~~s~~~~vvigt~~G~V~~Ln~s~--~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~le 100 (933)
T KOG2114|consen 31 CSSSTGSVVIGTADGRVVILNSSF--QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLE 100 (933)
T ss_pred EcCCCceEEEeeccccEEEecccc--eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccc
Confidence 456778899999999887765532 222445555544 33332222335666666653 47899875
No 297
>KOG4649|consensus
Probab=94.99 E-value=0.21 Score=25.26 Aligned_cols=60 Identities=10% Similarity=0.109 Sum_probs=37.7
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCE-EEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWV-KNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++.|...+.+++.+..+ +.....+..- ..| ......+++.++-++++|+.+...|++
T Consensus 63 gdfVV~GCy~g~lYfl~~~t-Gs~~w~f~~~-~~vk~~a~~d~~~glIycgshd~~~yalD~~ 123 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKT-GSQIWNFVIL-ETVKVRAQCDFDGGLIYCGSHDGNFYALDPK 123 (354)
T ss_pred CCEEEEEEccCcEEEEEecc-hhheeeeeeh-hhhccceEEcCCCceEEEecCCCcEEEeccc
Confidence 45677777778888777766 3333333221 122 222345677888899999988887765
No 298
>KOG1354|consensus
Probab=94.94 E-value=0.24 Score=25.87 Aligned_cols=64 Identities=17% Similarity=0.299 Sum_probs=43.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCC------------CCE---EEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHS------------NWV---KNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
|+.+|+++.+-+. -.+++||+.-...++.+...|. ..+ .-++|+.+...+++|+....+++++.
T Consensus 280 Fs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~ 358 (433)
T KOG1354|consen 280 FSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNL 358 (433)
T ss_pred EccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecC
Confidence 5667787776554 5899999953345555554442 111 34568888889999999999999873
No 299
>KOG2066|consensus
Probab=94.89 E-value=0.33 Score=27.94 Aligned_cols=53 Identities=15% Similarity=0.187 Sum_probs=36.6
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+.+++.|..+|.+++.+..- .+ .+...|+.. ..+|.++++|+.||++.+-.+
T Consensus 48 ~~~~~~~GtH~g~v~~~~~~~--~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl 100 (846)
T KOG2066|consen 48 HDKFFALGTHRGAVYLTTCQG--NP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSL 100 (846)
T ss_pred hcceeeeccccceEEEEecCC--cc-ccccccccc------ccCCceEEEecCCCcEEEeec
Confidence 356788899999988877653 22 333344332 457889999999998887643
No 300
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=94.69 E-value=0.29 Score=25.47 Aligned_cols=64 Identities=19% Similarity=0.261 Sum_probs=42.0
Q ss_pred eeecCcEEEEeeC----------CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEe-CCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSD----------DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAG-FDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~ 67 (68)
+.++++.++.... .+.+.++|..+ ......+.. ...++.++++++++ ++.... .++.+.+.|..
T Consensus 255 ~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t-~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~ 330 (352)
T TIGR02658 255 YHRARDRIYLLADQRAKWTHKTASRFLFVVDAKT-GKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAE 330 (352)
T ss_pred EcCCCCEEEEEecCCccccccCCCCEEEEEECCC-CeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECc
Confidence 4566766666421 14677788776 444444443 34678999999987 666555 57889998864
No 301
>KOG2377|consensus
Probab=94.52 E-value=0.39 Score=26.25 Aligned_cols=65 Identities=11% Similarity=0.044 Sum_probs=43.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCC--CCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARN--LKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
|+.|.+....+...|-..-|.... ...++.......+++.++.|+++++.++..-.+..+.+++.
T Consensus 29 FfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf 95 (657)
T KOG2377|consen 29 FFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNF 95 (657)
T ss_pred eeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEec
Confidence 445544433334444445454432 24566666667779999999999999999888888888765
No 302
>KOG3914|consensus
Probab=94.30 E-value=0.39 Score=25.32 Aligned_cols=38 Identities=24% Similarity=0.379 Sum_probs=31.2
Q ss_pred ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 29 RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+.....+|-..+..++++|+.+.++++..|..|++-.+
T Consensus 143 ~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~y 180 (390)
T KOG3914|consen 143 RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRY 180 (390)
T ss_pred CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEec
Confidence 34445577788899999999999999999999998654
No 303
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.21 E-value=0.11 Score=18.64 Aligned_cols=29 Identities=28% Similarity=0.310 Sum_probs=19.1
Q ss_pred CEEEEEEcCCCC---EEEEEeCCCCEEEEeCC
Q psy11876 39 WVKNIEFSSKDN---LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 39 ~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~ 67 (68)
.+.+++|+|.+. +++-.=..+.+.++|.+
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 356777886433 55555556888888876
No 304
>KOG1008|consensus
Probab=94.07 E-value=0.06 Score=30.02 Aligned_cols=62 Identities=24% Similarity=0.412 Sum_probs=37.7
Q ss_pred cCcEEEEeeCCCCEEEee-cCCCCcceEEeccCCC----CEEEEEEcCCC-CEEEEEeC-CCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWD-ARNLKTRVRTLQGHSN----WVKNIEFSSKD-NLLVTAGF-DGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~-~~~i~~~~~~ 67 (68)
..+.+++-+ |+.+-+|| .++...++..+..... .+..++|+|.. -.++++.. .++|+++++.
T Consensus 207 ~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 207 SPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred CCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 344555555 89999999 4443444443333333 47889999953 33444444 4789888864
No 305
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=94.02 E-value=0.49 Score=25.43 Aligned_cols=55 Identities=24% Similarity=0.311 Sum_probs=32.1
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
|..++..+.+ .+.+||+.+ ...+..+... .+..+.|++++.+++-.+.+ .+.+++
T Consensus 117 G~LL~~~~~~-~i~~yDw~~-~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWET-GKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT---EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhH-cceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 5556666544 799999987 4555555433 37899999999888877644 444543
No 306
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=93.96 E-value=0.34 Score=23.42 Aligned_cols=62 Identities=15% Similarity=0.285 Sum_probs=39.1
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceE-----E-ec-------cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVR-----T-LQ-------GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+++++.+-..+|.+++||+...+.... . +. .....+..+.+..+|..+++.+ ++....|+.
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~ 94 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSP 94 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecc
Confidence 4667788888899999999976321110 1 11 2334566777777787777665 355666653
No 307
>KOG1912|consensus
Probab=93.96 E-value=0.69 Score=26.98 Aligned_cols=60 Identities=18% Similarity=0.331 Sum_probs=41.9
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC------------EEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN------------LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~~ 67 (68)
+..|+-|+- ..|.+-|... .+.+..+.-|...|..+.|.|... .++++...|.|.+||..
T Consensus 26 ~GLiAygsh-slV~VVDs~s-~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~ 97 (1062)
T KOG1912|consen 26 SGLIAYGSH-SLVSVVDSRS-LQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFV 97 (1062)
T ss_pred cceEEEecC-ceEEEEehhh-hhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEeh
Confidence 345666653 5677778776 455666777888899999987421 34566677999999864
No 308
>KOG1832|consensus
Probab=93.95 E-value=0.11 Score=30.53 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=39.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCE-EEEEeCCC-CEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNL-LVTAGFDG-SIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~i~~~~~ 66 (68)
|+.+.++++.|+..|.+++++..+ +......-+|...+..+.=+.++.. +.+.+... ..-+|++
T Consensus 1109 fs~~~~hL~vG~~~Geik~~nv~s-G~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1109 FSGGTNHLAVGSHAGEIKIFNVSS-GSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred eecCCceEEeeeccceEEEEEccC-ccccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence 455678999999999999999876 4444444567766666654445433 33333332 3345554
No 309
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=93.78 E-value=0.58 Score=25.50 Aligned_cols=29 Identities=24% Similarity=0.483 Sum_probs=21.1
Q ss_pred EEEEEEcC----CCCEEEEEeCCCCEEEEeCCC
Q psy11876 40 VKNIEFSS----KDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 40 ~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~ 68 (68)
....+... +...+++.+.|+++++||+.+
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t 249 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLET 249 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTT
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCC
Confidence 34445544 567889999999999999864
No 310
>KOG4640|consensus
Probab=93.74 E-value=0.25 Score=27.60 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=28.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEc
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFS 46 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (68)
.|||+.++.|-.||.+++.|..+..............+....|.
T Consensus 71 ~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 71 RPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred cCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeecc
Confidence 36899999999999999999976332222122233445555554
No 311
>PRK01029 tolB translocation protein TolB; Provisional
Probab=93.55 E-value=0.59 Score=24.83 Aligned_cols=53 Identities=9% Similarity=-0.018 Sum_probs=27.6
Q ss_pred eeecCcE---EEEeeCCCCEEEe--ecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe
Q psy11876 2 IFLDTRV---FATCSDDTTIALW--DARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 2 ~~~~~~~---~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
.+||++. +++...++.-.+| ++.. .. ...+...........|+|+++.++...
T Consensus 192 wSPDG~~~~~~y~S~~~g~~~I~~~~l~~-g~-~~~lt~~~g~~~~p~wSPDG~~Laf~s 249 (428)
T PRK01029 192 WMHIGSGFPYLYVSYKLGVPKIFLGSLEN-PA-GKKILALQGNQLMPTFSPRKKLLAFIS 249 (428)
T ss_pred EccCCCceEEEEEEccCCCceEEEEECCC-CC-ceEeecCCCCccceEECCCCCEEEEEE
Confidence 5788753 3355555544444 4443 21 222222333344678999997666443
No 312
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=93.43 E-value=0.31 Score=21.20 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=35.3
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+.|+.|+.|..|++|+-.. .+..+... ..+..+.-... ..++.+..+|++-+|+.
T Consensus 16 ~eLlvGs~D~~IRvf~~~e---~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGDE---IVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDR 70 (111)
T ss_pred ceEEEecCCcEEEEEeCCc---EEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence 6799999999999987643 34444433 33444444333 45666667777777653
No 313
>KOG1912|consensus
Probab=93.31 E-value=0.58 Score=27.25 Aligned_cols=59 Identities=14% Similarity=0.210 Sum_probs=41.2
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC---CC-CEEEEEeCCCCEEEEeC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS---KD-NLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~i~~~~~ 66 (68)
-.|+++...|.|-+||... ...+..+..+..++..++|-+ +. ..++.-....++.+|+-
T Consensus 80 lliAsaD~~GrIil~d~~~-~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwnt 142 (1062)
T KOG1912|consen 80 LLIASADISGRIILVDFVL-ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNT 142 (1062)
T ss_pred eeEEeccccCcEEEEEehh-hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEc
Confidence 3578888889999999876 445555666777777777765 34 34455556678888853
No 314
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=93.05 E-value=0.65 Score=23.83 Aligned_cols=66 Identities=12% Similarity=0.155 Sum_probs=42.6
Q ss_pred eeecCcEEEEeeC----CCCEEEeecCCC-Cc--ceEEeccCCCCEEEEEEcCCCCEEEEEe-CCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSD----DTTIALWDARNL-KT--RVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~----~~~v~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 67 (68)
++++++.+++... ++.+..|.+... .. .+..........+.+++.++++.+..+. .++.+.++++.
T Consensus 44 ~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~ 117 (345)
T PF10282_consen 44 VSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD 117 (345)
T ss_dssp E-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence 4567888888877 457888877652 11 2223332344557888999887776665 57888888754
No 315
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=92.81 E-value=1 Score=25.51 Aligned_cols=55 Identities=11% Similarity=0.361 Sum_probs=36.3
Q ss_pred EEeeCCCCEEEeecCCCCcceEE-eccCCCCEEEEEEc--CCCCEEEEEeCCCCEEEEe
Q psy11876 10 ATCSDDTTIALWDARNLKTRVRT-LQGHSNWVKNIEFS--SKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~ 65 (68)
++-+....+.+||.+. ...... .......|..+.|. |+++.+.+.+..+.+.++.
T Consensus 45 ~V~~~~~~LtIWD~~~-~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 45 VVDSSRSELTIWDTRS-GVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred EEECCCCEEEEEEcCC-cEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 3333345677899875 222111 12346678888885 5788999999999988874
No 316
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=92.75 E-value=0.74 Score=23.72 Aligned_cols=58 Identities=10% Similarity=0.108 Sum_probs=34.5
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
.+..++.++.++.+.+++..+ .........+...+...-.. -+..+..++.+|.+..+
T Consensus 319 ~g~~l~~~~~~G~l~~~d~~t-G~~~~~~~~~~~~~~~sp~~-~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 319 VGGYLVVGDFEGYLHWLSRED-GSFVARLKTDGSGIASPPVV-VGDGLLVQTRDGDLYAF 376 (377)
T ss_pred ECCEEEEEeCCCEEEEEECCC-CCEEEEEEcCCCccccCCEE-ECCEEEEEeCCceEEEe
Confidence 456788888899999998876 44444444333222211111 22356677788887654
No 317
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=92.69 E-value=0.87 Score=24.40 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=27.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN 38 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 38 (68)
++|++++.++.+.-|.|.++|... ...+...++.++
T Consensus 315 ~sP~~~laA~tDslGRV~LiD~~~-~~vvrmWKGYRd 350 (415)
T PF14655_consen 315 LSPSGRLAAVTDSLGRVLLIDVAR-GIVVRMWKGYRD 350 (415)
T ss_pred ECCCCCEEEEEcCCCcEEEEECCC-ChhhhhhccCcc
Confidence 578888888888889999999976 555555666554
No 318
>PRK02888 nitrous-oxide reductase; Validated
Probab=92.68 E-value=1.1 Score=25.44 Aligned_cols=65 Identities=23% Similarity=0.268 Sum_probs=44.3
Q ss_pred eeecCcEE-EEeeCCCCEEEeecCCCCc-----------ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVF-ATCSDDTTIALWDARNLKT-----------RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++||+..+ +++..+..+.+.+..+... ....... .......+|.+++..+.+...|+++-.|++.
T Consensus 328 vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~ 404 (635)
T PRK02888 328 TSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIE 404 (635)
T ss_pred ECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehH
Confidence 57888765 5566678999999865221 1112222 2233466788888888899999999999864
No 319
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=92.58 E-value=1.1 Score=25.13 Aligned_cols=51 Identities=20% Similarity=0.332 Sum_probs=32.9
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
.+.+++.++..|-+++|+--- ......+.+....+..+....++.++++-+
T Consensus 572 esGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTC 622 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATC 622 (776)
T ss_pred cCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEee
Confidence 356899999999999998532 222223444555667777777776555444
No 320
>KOG0882|consensus
Probab=92.23 E-value=0.04 Score=29.43 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=44.5
Q ss_pred CcEEEEeeCCCCEEEeecCC-CCc-ceEEeccCCCCEEEEEEcCCCCEEEEEeC-CCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARN-LKT-RVRTLQGHSNWVKNIEFSSKDNLLVTAGF-DGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 67 (68)
..++.+++.|+.++.|-... ... .+..+.+|-..+.+++.+.++.+..+.+. |..++++|+.
T Consensus 20 a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvE 84 (558)
T KOG0882|consen 20 AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVE 84 (558)
T ss_pred hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEee
Confidence 46889999999999997643 121 22234566666777777888888877666 8888888764
No 321
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=92.20 E-value=0.62 Score=22.56 Aligned_cols=23 Identities=22% Similarity=0.618 Sum_probs=18.9
Q ss_pred cCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 46 SSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 46 ~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
...+.++++.+.+|.+.+||+.+
T Consensus 19 ~~~~~~Ll~iT~~G~l~vWnl~~ 41 (219)
T PF07569_consen 19 ECNGSYLLAITSSGLLYVWNLKK 41 (219)
T ss_pred EeCCCEEEEEeCCCeEEEEECCC
Confidence 34677889999999999999863
No 322
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=92.00 E-value=1.1 Score=24.03 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=32.8
Q ss_pred eeecCcEE-EEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCCCEEEE
Q psy11876 2 IFLDTRVF-ATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~ 64 (68)
++||++.+ .+...|+...+|-+.........+......-..=.|+|+++.++ ..+..|.-.+|
T Consensus 245 fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~ 309 (425)
T COG0823 245 FSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIY 309 (425)
T ss_pred CCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceE
Confidence 67887654 56666676666655431222222222222112446889886655 44555655555
No 323
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=91.69 E-value=0.89 Score=22.30 Aligned_cols=60 Identities=18% Similarity=0.336 Sum_probs=37.5
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..++.++.|..+| +.+++........... ....|..+...++-+.++..+ |+.+.++++.
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~ 64 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLD 64 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEch
Confidence 4567889998888 7888873212222222 222377777777666555554 4888888754
No 324
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=91.51 E-value=1.4 Score=24.34 Aligned_cols=60 Identities=13% Similarity=0.226 Sum_probs=41.7
Q ss_pred CcEEEEeeCCC-CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDT-TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.-++.|..|+ .+-+++... .....+...-..+..+..++++..++.+.....+.+.|+.
T Consensus 371 ~e~~vigt~dgD~l~iyd~~~--~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vidid 431 (668)
T COG4946 371 PEGDVIGTNDGDKLGIYDKDG--GEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDID 431 (668)
T ss_pred CcceEEeccCCceEEEEecCC--ceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEec
Confidence 33567777777 777787765 2233444455567888999999888888777777777664
No 325
>KOG2041|consensus
Probab=91.43 E-value=1.4 Score=25.71 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=37.6
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD 58 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (68)
|+...++.+..+|.+.+-+..+...|...-. ...+....|++++..++.++.+
T Consensus 227 pdrP~lavcy~nGr~QiMR~eND~~Pvv~dt--gm~~vgakWnh~G~vLAvcG~~ 279 (1189)
T KOG2041|consen 227 PDRPRLAVCYANGRMQIMRSENDPEPVVVDT--GMKIVGAKWNHNGAVLAVCGND 279 (1189)
T ss_pred CCCCEEEEEEcCceehhhhhcCCCCCeEEec--ccEeecceecCCCcEEEEccCc
Confidence 5777899999999888766555344443333 3567788999999888877654
No 326
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=91.28 E-value=1.3 Score=23.25 Aligned_cols=66 Identities=15% Similarity=0.286 Sum_probs=40.7
Q ss_pred eeecCcEEEEeeCC-CCEEEeecCCCCcc--eEEeccCCCC----------EEEEEEcCCCCEEEEEeCC-CCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD-TTIALWDARNLKTR--VRTLQGHSNW----------VKNIEFSSKDNLLVTAGFD-GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~i~~~~~~ 67 (68)
+++++++++++... +.+.++.++..+.. ......|... ++...+.|+++.+.+.+.. -.+.+|++.
T Consensus 96 vd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~ 175 (346)
T COG2706 96 VDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLD 175 (346)
T ss_pred ECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcc
Confidence 34567777666655 67788877653221 1112223333 6777889999888877764 567777653
No 327
>KOG1920|consensus
Probab=90.95 E-value=2.5 Score=26.00 Aligned_cols=59 Identities=17% Similarity=0.178 Sum_probs=41.4
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+.+.++.+...|.+.+-+..+. ..........+|.+.+|+|++..++-.+..+++.+..
T Consensus 79 d~~~i~v~~~~G~iilvd~et~--~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 79 DTNSICVITALGDIILVDPETL--ELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMT 137 (1265)
T ss_pred ccceEEEEecCCcEEEEccccc--ceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe
Confidence 5566777777888887766542 1222333467889999999999888888777776654
No 328
>KOG1916|consensus
Probab=90.87 E-value=0.67 Score=27.55 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=21.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~ 25 (68)
++|||..++.+..||.+++|.+..
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qiyi 266 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQIYI 266 (1283)
T ss_pred eCCCCcEEEEeecCCccceeeeee
Confidence 589999999999999999998753
No 329
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=90.35 E-value=1.5 Score=22.93 Aligned_cols=63 Identities=19% Similarity=0.279 Sum_probs=40.9
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcc----eEEeccCC------------CCEEEEEEcCC--CCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTR----VRTLQGHS------------NWVKNIEFSSK--DNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~ 66 (68)
.|.++++|...|.+.++.-....-+ ...+++|. ..+..+.|... ...+...+.|.++.+|.+
T Consensus 37 tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNdktiKlWKi 116 (460)
T COG5170 37 TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTNDKTIKLWKI 116 (460)
T ss_pred ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCCceeeeeee
Confidence 4678899988898888865442211 11233332 34667777653 356777788999999976
Q ss_pred C
Q psy11876 67 N 67 (68)
Q Consensus 67 ~ 67 (68)
.
T Consensus 117 y 117 (460)
T COG5170 117 Y 117 (460)
T ss_pred e
Confidence 4
No 330
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=90.01 E-value=1.3 Score=21.40 Aligned_cols=66 Identities=20% Similarity=0.169 Sum_probs=39.6
Q ss_pred eeecCcEEE-EeeCCCCEEEeecCCCCc-c--eEEe---ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFA-TCSDDTTIALWDARNLKT-R--VRTL---QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~-~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.++ +-+..+.|..+++..... . ...+ .......-.+++..+++++++....+.|.+++..
T Consensus 141 ~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~ 213 (246)
T PF08450_consen 141 FSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD 213 (246)
T ss_dssp EETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT
T ss_pred ECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC
Confidence 577887665 555556677777643222 1 1111 1122235678888888888888778888887753
No 331
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=89.55 E-value=2.7 Score=24.34 Aligned_cols=31 Identities=26% Similarity=0.342 Sum_probs=25.4
Q ss_pred CCCEEEEEEcCC---CCEEEEEeCCCCEEEEeCC
Q psy11876 37 SNWVKNIEFSSK---DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 37 ~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~ 67 (68)
...+..+.|+|. +..++....|+.+++||+.
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDIS 179 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecC
Confidence 346778899995 4788888999999999975
No 332
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=88.80 E-value=2 Score=23.59 Aligned_cols=21 Identities=29% Similarity=0.532 Sum_probs=18.8
Q ss_pred cCcEEEEeeCCCCEEEeecCC
Q psy11876 5 DTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~ 25 (68)
+..++++.+.|+.+++|++.+
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t 249 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLET 249 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEeCCCeEEEEECCC
Confidence 567889999999999999987
No 333
>KOG1645|consensus
Probab=88.28 E-value=0.88 Score=24.40 Aligned_cols=37 Identities=24% Similarity=0.478 Sum_probs=28.2
Q ss_pred EeccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeCCC
Q psy11876 32 TLQGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~ 68 (68)
....+...|..++++|..+ ++..++.+.+|.+.|+++
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet 225 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLET 225 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEeccc
Confidence 3445566778889999765 678888999999998763
No 334
>KOG2315|consensus
Probab=88.21 E-value=3.1 Score=23.32 Aligned_cols=31 Identities=26% Similarity=0.573 Sum_probs=23.8
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC---CCEEEEeCC
Q psy11876 37 SNWVKNIEFSSKDNLLVTAGFD---GSIYTWDIN 67 (68)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~ 67 (68)
+.+-+.+-|+|.+++++.++++ |.+-+||+.
T Consensus 311 egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~ 344 (566)
T KOG2315|consen 311 EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVP 344 (566)
T ss_pred CCCccceEECCCCCEEEEeecCCCCCceEEEecc
Confidence 3344678899999888877764 889999975
No 335
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=88.19 E-value=2.8 Score=22.67 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=27.8
Q ss_pred EeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 32 TLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+.+....+..+..+|.+++.+..+.-|.|.++|..
T Consensus 302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~ 337 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVA 337 (415)
T ss_pred eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 344455667889999998888777666999999875
No 336
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=87.30 E-value=3.1 Score=22.25 Aligned_cols=31 Identities=16% Similarity=0.151 Sum_probs=21.4
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 36 HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
...+|.+++.+.-+ .++.+..+|.+.+.|+|
T Consensus 85 ~~g~vtal~~S~iG-Fvaigy~~G~l~viD~R 115 (395)
T PF08596_consen 85 KQGPVTALKNSDIG-FVAIGYESGSLVVIDLR 115 (395)
T ss_dssp -S-SEEEEEE-BTS-EEEEEETTSEEEEEETT
T ss_pred cCCcEeEEecCCCc-EEEEEecCCcEEEEECC
Confidence 35667777765444 67788889999999986
No 337
>PRK04043 tolB translocation protein TolB; Provisional
Probab=87.04 E-value=3.2 Score=22.25 Aligned_cols=57 Identities=19% Similarity=0.177 Sum_probs=28.2
Q ss_pred eeecCcEEE-EeeCCCC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEE-eCCCC
Q psy11876 2 IFLDTRVFA-TCSDDTT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTA-GFDGS 60 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 60 (68)
++||++.++ +.+.++. +.+++... . ....+.........-.|+|+++.++-. ...+.
T Consensus 240 ~SPDG~~la~~~~~~g~~~Iy~~dl~~-g-~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~ 300 (419)
T PRK04043 240 VSKDGSKLLLTMAPKGQPDIYLYDTNT-K-TLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGY 300 (419)
T ss_pred ECCCCCEEEEEEccCCCcEEEEEECCC-C-cEEEcccCCCccCccEECCCCCEEEEEECCCCC
Confidence 567886554 4444444 44445443 2 223333333222345799998755544 33443
No 338
>KOG4190|consensus
Probab=86.74 E-value=1.4 Score=24.87 Aligned_cols=59 Identities=29% Similarity=0.409 Sum_probs=39.2
Q ss_pred EEEeeCCCCEEEeecCCCCcceE--Ee--ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 9 FATCSDDTTIALWDARNLKTRVR--TL--QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++.++....++++|.+...+... .+ .+-...+.+++..+.+++++.+-..|.+.+.|.+
T Consensus 844 iAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR 906 (1034)
T KOG4190|consen 844 IAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDAR 906 (1034)
T ss_pred eeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecC
Confidence 34447778899998876433211 11 2233456788899999888888778888777755
No 339
>KOG2314|consensus
Probab=86.71 E-value=4.2 Score=23.14 Aligned_cols=55 Identities=13% Similarity=0.153 Sum_probs=33.2
Q ss_pred eeecCcEEEEe---eCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC
Q psy11876 2 IFLDTRVFATC---SDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF 57 (68)
Q Consensus 2 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (68)
.+|.|++++.+ ++.+.+.++|.............|. ....+.|.|.|+++.+++.
T Consensus 500 wsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ss 557 (698)
T KOG2314|consen 500 WSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHF-AATEVEWDPTGRYVVTSSS 557 (698)
T ss_pred EcCCCcEEEEEEecccccceEEEecchhhhhhccCcccc-ccccceECCCCCEEEEeee
Confidence 46778776554 4457788888753111111112232 3467789999999988875
No 340
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=86.47 E-value=3.5 Score=22.06 Aligned_cols=28 Identities=18% Similarity=0.450 Sum_probs=21.3
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 38 NWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
..+..+.|..+. .++....+|.++++|+
T Consensus 81 ~~iv~~~wt~~e-~LvvV~~dG~v~vy~~ 108 (410)
T PF04841_consen 81 GRIVGMGWTDDE-ELVVVQSDGTVRVYDL 108 (410)
T ss_pred CCEEEEEECCCC-eEEEEEcCCEEEEEeC
Confidence 667788887754 4556678999999986
No 341
>KOG1832|consensus
Probab=85.88 E-value=3.6 Score=24.98 Aligned_cols=38 Identities=21% Similarity=0.382 Sum_probs=31.2
Q ss_pred eEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 30 VRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
...+..+.....+++|+.+.++++.|+..|.++++++.
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~ 1131 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVS 1131 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEcc
Confidence 33455667777889999988999999999999999764
No 342
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=85.00 E-value=6.4 Score=23.71 Aligned_cols=62 Identities=15% Similarity=0.215 Sum_probs=36.0
Q ss_pred ecCcEEEEeeCC---CCEEEeecCCCCcceEEe--ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDD---TTIALWDARNLKTRVRTL--QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
|.|+.|++.-.. ..|-+|+-+-.+.-.... ......+..+.|+.++..++....+. +.+|-.
T Consensus 266 PsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~ 332 (928)
T PF04762_consen 266 PSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTR 332 (928)
T ss_pred CCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEe
Confidence 677877776651 233344332111111111 13445788999999998888766444 889854
No 343
>KOG2314|consensus
Probab=84.51 E-value=5.6 Score=22.68 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=36.3
Q ss_pred eeecCcEEEEeeCC-----------CCEEEeecCCCCcceEEecc--CCCCE-EEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDD-----------TTIALWDARNLKTRVRTLQG--HSNWV-KNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+||+.++|++=+.. ..+.+||+.+ +.....+.. ....+ ..+.|+.+..+++.... ..|.+++
T Consensus 257 fSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t-G~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyE 332 (698)
T KOG2314|consen 257 FSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT-GLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYE 332 (698)
T ss_pred cCCccceEEEecCCccccCcccCCCceEEEEEccc-cchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEe
Confidence 45666666554322 4678999987 433333333 22223 46789999888876654 3444554
No 344
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=84.00 E-value=4.4 Score=21.04 Aligned_cols=60 Identities=13% Similarity=0.129 Sum_probs=31.4
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCE-EEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWV-KNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+..++.++.++.+..++..+ .............. ..... .+..+..++.++.+.++|..
T Consensus 278 ~~~~vyv~~~~G~l~~~d~~t-G~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~ 338 (377)
T TIGR03300 278 DDNRLYVTDADGVVVALDRRS-GSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSRE 338 (377)
T ss_pred eCCEEEEECCCCeEEEEECCC-CcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECC
Confidence 345566667777777777765 33222221111111 11111 34466677778888888754
No 345
>KOG4649|consensus
Probab=83.55 E-value=4.5 Score=20.86 Aligned_cols=29 Identities=17% Similarity=0.075 Sum_probs=22.2
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEE
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRT 32 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 32 (68)
.+++..++.++.|+..+..|.+. ...+..
T Consensus 102 d~~~glIycgshd~~~yalD~~~-~~cVyk 130 (354)
T KOG4649|consen 102 DFDGGLIYCGSHDGNFYALDPKT-YGCVYK 130 (354)
T ss_pred cCCCceEEEecCCCcEEEecccc-cceEEe
Confidence 45788999999999999988876 334443
No 346
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=83.12 E-value=7.5 Score=23.09 Aligned_cols=57 Identities=14% Similarity=0.104 Sum_probs=35.1
Q ss_pred EEEEeeCCCCEEEeecCCCCcceEEecc----CCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 8 VFATCSDDTTIALWDARNLKTRVRTLQG----HSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
....|-.++.+..||.+.....+..-.. ......+++...+| .++.|+.+|.|++||
T Consensus 544 ~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd 604 (794)
T PF08553_consen 544 QTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYD 604 (794)
T ss_pred ceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeec
Confidence 3456666778888888763322221111 12234455555555 688899999999997
No 347
>KOG1275|consensus
Probab=83.00 E-value=8.3 Score=23.49 Aligned_cols=59 Identities=17% Similarity=0.328 Sum_probs=41.2
Q ss_pred cEEEEeeCCCCEEEeecCCCCc---ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 7 RVFATCSDDTTIALWDARNLKT---RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
..++.++..|...+.+...... ...........+..+.+++.+..++.+..++.+.+|.
T Consensus 279 t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 279 TRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 3466677778888777332122 2333334455678899999999999999999999995
No 348
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=82.73 E-value=5.9 Score=21.55 Aligned_cols=59 Identities=8% Similarity=0.137 Sum_probs=36.8
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
..+++.-+.||.+.+++-+.. .........--..-+.+.+....+++++.+..+.-|.+
T Consensus 145 ~~~IcVQS~DG~L~~feqe~~--~f~~~lp~~llPgPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 145 RDFICVQSMDGSLSFFEQESF--AFSRFLPDFLLPGPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred ceEEEEEecCceEEEEeCCcE--EEEEEcCCCCCCcCeEEeecCCEEEEecCceeEEEecH
Confidence 357899999999999988652 11222222222235566776667777776666665543
No 349
>KOG1916|consensus
Probab=82.15 E-value=1.1 Score=26.79 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=36.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEE-----------EEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVK-----------NIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+...++.+..++.+++..+..... ..+.+|..++. .-.++|+|..++..+.||.+..|.+
T Consensus 194 ~~~~ic~~~~~~~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 194 NKVYICYGLKGGEIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred ccceeeeccCCCceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 345567777778888766643111 12223332221 2236888888888888988888764
No 350
>KOG3630|consensus
Probab=82.01 E-value=2.8 Score=25.83 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=24.0
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 37 SNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
.....+++|+|.+..++.+...|++..|.
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt~vQy~ 226 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGTEVQYE 226 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCeEEEee
Confidence 34567999999999999998888887764
No 351
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=80.62 E-value=8.8 Score=22.16 Aligned_cols=30 Identities=23% Similarity=0.447 Sum_probs=21.2
Q ss_pred CCCCEEEEEEcCCCC-EEEEEeCCCCEEEEe
Q psy11876 36 HSNWVKNIEFSSKDN-LLVTAGFDGSIYTWD 65 (68)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~ 65 (68)
..+.|++.+|.++++ ++++.+..-.-.+||
T Consensus 154 ~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 154 TSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred CCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 456789999999874 555555555666776
No 352
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=79.72 E-value=5.5 Score=19.33 Aligned_cols=30 Identities=30% Similarity=0.641 Sum_probs=21.1
Q ss_pred CCCEEEEEEcCCCCEE-EEEeCCCCEEEEeC
Q psy11876 37 SNWVKNIEFSSKDNLL-VTAGFDGSIYTWDI 66 (68)
Q Consensus 37 ~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~ 66 (68)
-...+.++|+|+++.+ ++-+..+.|..+++
T Consensus 133 ~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~ 163 (246)
T PF08450_consen 133 LGFPNGIAFSPDGKTLYVADSFNGRIWRFDL 163 (246)
T ss_dssp ESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred cccccceEECCcchheeecccccceeEEEec
Confidence 3445789999988654 56666777777664
No 353
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=79.40 E-value=7.5 Score=20.65 Aligned_cols=66 Identities=9% Similarity=0.121 Sum_probs=39.2
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCC-Ccc--eEEeccCCCCEEEEEEcCCCCEEEEEeC-CCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNL-KTR--VRTLQGHSNWVKNIEFSSKDNLLVTAGF-DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 67 (68)
+.++++.++++..+ +-+-.|.+... +.. +........+.+.+++.++++.++++.. .+.+.++.++
T Consensus 47 ~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~ 119 (346)
T COG2706 47 VNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQ 119 (346)
T ss_pred ECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcc
Confidence 45677777766654 56666766542 211 1112222334478889999988776654 5778777653
No 354
>PRK04043 tolB translocation protein TolB; Provisional
Probab=79.23 E-value=8 Score=20.88 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=33.0
Q ss_pred eeecCcE-EEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCC--CEEEEeC
Q psy11876 2 IFLDTRV-FATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDG--SIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~-~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~~~ 66 (68)
.+|+++. ++..+.+ ..+.++++.+ +. ...+...........|+|+++.++ +.+.++ .+.+++.
T Consensus 195 wSpDG~~~i~y~s~~~~~~~Iyv~dl~t-g~-~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl 264 (419)
T PRK04043 195 WANKEQTAFYYTSYGERKPTLYKYNLYT-GK-KEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDT 264 (419)
T ss_pred ECCCCCcEEEEEEccCCCCEEEEEECCC-Cc-EEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEEC
Confidence 4678763 5543333 4466666654 22 222323344445677999986554 444443 4555553
No 355
>KOG2395|consensus
Probab=79.19 E-value=9.6 Score=21.76 Aligned_cols=56 Identities=14% Similarity=0.210 Sum_probs=32.2
Q ss_pred EEeeCCCCEEEeecCCCCc-ceEEeccCC--CC--EEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 10 ATCSDDTTIALWDARNLKT-RVRTLQGHS--NW--VKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 10 ~~~~~~~~v~~~~~~~~~~-~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
..|-.++.+.-|+.+.... .+..-++++ .. ..+++-. ..-+++.++.+|.|++||.
T Consensus 398 lvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT-~sG~IvvgS~~GdIRLYdr 458 (644)
T KOG2395|consen 398 LVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT-ESGYIVVGSLKGDIRLYDR 458 (644)
T ss_pred EEeecCCceEEecccccCcceeeeeeccccccccccceeeec-CCceEEEeecCCcEEeehh
Confidence 4456667777788875333 222222222 11 2233322 3347889999999999973
No 356
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=78.97 E-value=7.3 Score=20.28 Aligned_cols=61 Identities=11% Similarity=0.245 Sum_probs=33.1
Q ss_pred eecCcEEEEeeC---------CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 3 FLDTRVFATCSD---------DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
|||+++++.... .+...++++.+ . ....+...........|+|+++.++-.. ++.|.+.+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~-~-~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~ 70 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIET-G-EITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDL 70 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTT-T-EEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESS
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCC-C-ceEECcCCccccccceeecCCCeeEEEe-cCceEEEEC
Confidence 466666555321 23455666665 2 2223332345667889999998877664 455665543
No 357
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=78.75 E-value=1.9 Score=13.52 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=9.4
Q ss_pred EEEEcCCCCEEEEEeCCCCEE
Q psy11876 42 NIEFSSKDNLLVTAGFDGSIY 62 (68)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~i~ 62 (68)
.++..+++..+++-.....+.
T Consensus 6 gvav~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 6 GVAVDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EEEEETTSEEEEEECCCTEEE
T ss_pred EEEEeCCCCEEEEECCCCEEE
Confidence 444444444444444444443
No 358
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=78.44 E-value=5.8 Score=18.87 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=18.0
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcce
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRV 30 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~ 30 (68)
++..+++++.++.+..++..+ +...
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~t-G~~~ 59 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKT-GKVL 59 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTT-SEEE
T ss_pred eCCEEEEEcCCCEEEEEECCC-CCEE
Confidence 566677777888889999876 4433
No 359
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=78.42 E-value=8.5 Score=20.72 Aligned_cols=46 Identities=7% Similarity=0.117 Sum_probs=27.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccC-CCCEEEEEEcCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGH-SNWVKNIEFSSK 48 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 48 (68)
+||+++.+|.-..+|.+.+....- ......+... ......+.|+.+
T Consensus 224 vSpng~~iAl~t~~g~l~v~ssDf-~~~~~e~~~~~~~~p~~~~WCG~ 270 (410)
T PF04841_consen 224 VSPNGKFIALFTDSGNLWVVSSDF-SEKLCEFDTDSKSPPKQMAWCGN 270 (410)
T ss_pred ECCCCCEEEEEECCCCEEEEECcc-cceeEEeecCcCCCCcEEEEECC
Confidence 678888888888888888776543 2222222222 233345566544
No 360
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=78.22 E-value=10 Score=21.44 Aligned_cols=33 Identities=9% Similarity=0.206 Sum_probs=22.9
Q ss_pred cCCCCEEEEEEcCCCCEEE--EEeCCCCEEEEeCC
Q psy11876 35 GHSNWVKNIEFSSKDNLLV--TAGFDGSIYTWDIN 67 (68)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~ 67 (68)
...++|+.++|.|.+..++ +|..+..+.++|++
T Consensus 272 ~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr 306 (561)
T COG5354 272 DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLR 306 (561)
T ss_pred cccccceeeeecccCCceeEEecccccceeecccc
Confidence 4577899999999876554 33456667776654
No 361
>PRK02888 nitrous-oxide reductase; Validated
Probab=76.42 E-value=13 Score=21.66 Aligned_cols=60 Identities=8% Similarity=0.153 Sum_probs=37.9
Q ss_pred cCcEEEEeeCCCCEEEeecCC----CCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARN----LKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 67 (68)
+++.... .++.|.+.|..+ .......+. .....+.+.++|+++++. ++..+.++.+.|..
T Consensus 287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~ 351 (635)
T PRK02888 287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVR 351 (635)
T ss_pred CCCEEEE--CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEECh
Confidence 4444443 245788888765 112233333 344568899999987665 55568999998875
No 362
>KOG2377|consensus
Probab=76.01 E-value=12 Score=21.14 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=28.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC---CcceEEeccCCCCEEEEEEcC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL---KTRVRTLQGHSNWVKNIEFSS 47 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 47 (68)
|++|.+.++..-.++.+.+++.... ......+......+..+.|..
T Consensus 74 FSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~ 122 (657)
T KOG2377|consen 74 FSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTS 122 (657)
T ss_pred eccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEec
Confidence 6789999999999999998877321 111222333344456666654
No 363
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=75.87 E-value=9.3 Score=19.85 Aligned_cols=61 Identities=25% Similarity=0.270 Sum_probs=31.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
.+++..++++.......-|+.-...... ........+..+.|.+++.+.+.. ..+.+..-+
T Consensus 153 ~~dG~~vavs~~G~~~~s~~~G~~~w~~-~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 153 SSDGRYVAVSSRGNFYSSWDPGQTTWQP-HNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp -TTS-EEEEETTSSEEEEE-TT-SS-EE-EE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred CCCCcEEEEECcccEEEEecCCCccceE-EccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 3567777777665444556654312222 223345778999999988776654 666666543
No 364
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=75.54 E-value=8.2 Score=19.09 Aligned_cols=47 Identities=15% Similarity=0.245 Sum_probs=29.8
Q ss_pred EEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcCCCCEEEEE
Q psy11876 8 VFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSSKDNLLVTA 55 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (68)
.+..+...+.|-+|++.... .+...+. .-+.+..+.++..|.++++-
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEE
Confidence 33333445679999987423 3333343 44678888898888877765
No 365
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=75.32 E-value=3.1 Score=14.06 Aligned_cols=20 Identities=15% Similarity=0.043 Sum_probs=12.5
Q ss_pred cCcEEEEeeCCCCEEEeecC
Q psy11876 5 DTRVFATCSDDTTIALWDAR 24 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~ 24 (68)
.+..++.++.++.+..++..
T Consensus 20 ~~g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT
T ss_pred ECCEEEEEcCCCEEEEEeCC
Confidence 34567777777777776653
No 366
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=71.60 E-value=3.9 Score=13.61 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=14.0
Q ss_pred ecCcEEEEee-CCCCEEEeecCC
Q psy11876 4 LDTRVFATCS-DDTTIALWDARN 25 (68)
Q Consensus 4 ~~~~~~~~~~-~~~~v~~~~~~~ 25 (68)
|+++.++.+. .++.+.+++..+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~ 23 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTAT 23 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCC
Confidence 4566555544 457788888765
No 367
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=71.39 E-value=13 Score=19.68 Aligned_cols=53 Identities=13% Similarity=0.180 Sum_probs=29.0
Q ss_pred eeecCcEEEEe-eCCC----CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe
Q psy11876 2 IFLDTRVFATC-SDDT----TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 2 ~~~~~~~~~~~-~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
++|+++.++.+ +..| .++++++.+ +..+......... ..+.|.+++..+.-..
T Consensus 131 ~Spdg~~la~~~s~~G~e~~~l~v~Dl~t-g~~l~d~i~~~~~-~~~~W~~d~~~~~y~~ 188 (414)
T PF02897_consen 131 VSPDGKRLAYSLSDGGSEWYTLRVFDLET-GKFLPDGIENPKF-SSVSWSDDGKGFFYTR 188 (414)
T ss_dssp ETTTSSEEEEEEEETTSSEEEEEEEETTT-TEEEEEEEEEEES-EEEEECTTSSEEEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEEEECCC-CcCcCCccccccc-ceEEEeCCCCEEEEEE
Confidence 56788766544 4444 477888877 3322211111111 2389999877665444
No 368
>KOG4460|consensus
Probab=69.66 E-value=19 Score=20.79 Aligned_cols=66 Identities=11% Similarity=-0.001 Sum_probs=38.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecC---C-----CCcceEEecc----------C-CCCEEEEEEcCCC---CEEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDAR---N-----LKTRVRTLQG----------H-SNWVKNIEFSSKD---NLLVTAGFDG 59 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~---~-----~~~~~~~~~~----------~-~~~~~~~~~~~~~---~~~~~~~~~~ 59 (68)
.++.|+.++..+.+|.+-++-.+ . .+++...+.. . .-.+.-.+|+|.. ..+.....|.
T Consensus 111 ~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdn 190 (741)
T KOG4460|consen 111 LSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDN 190 (741)
T ss_pred ecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCc
Confidence 45677888878888866654311 0 0222222221 1 1123456799864 5677777899
Q ss_pred CEEEEeCC
Q psy11876 60 SIYTWDIN 67 (68)
Q Consensus 60 ~i~~~~~~ 67 (68)
.+++|+..
T Consensus 191 viRiy~lS 198 (741)
T KOG4460|consen 191 VIRIYSLS 198 (741)
T ss_pred EEEEEecC
Confidence 99999875
No 369
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=69.64 E-value=15 Score=19.47 Aligned_cols=59 Identities=12% Similarity=0.109 Sum_probs=32.5
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+..++.++.++.+...+..+ .............+..--.. .+..+..++.+|.+..++.
T Consensus 335 ~g~l~v~~~~G~l~~ld~~t-G~~~~~~~~~~~~~~s~P~~-~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINRED-GRFVAQQKVDSSGFLSEPVV-ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCEEEEEeCCCEEEEEECCC-CCEEEEEEcCCCcceeCCEE-ECCEEEEEeCCceEEEEeC
Confidence 45667778888888888766 44333332222222111011 2345667778888877654
No 370
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=68.82 E-value=15 Score=19.16 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=25.4
Q ss_pred EeecCCCCcceEEeccCCCCEEEEEEcCCCCE-EEEEeCCCCEEEEeC
Q psy11876 20 LWDARNLKTRVRTLQGHSNWVKNIEFSSKDNL-LVTAGFDGSIYTWDI 66 (68)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 66 (68)
+|.+............+-...+.++|+|+++. +.+-+..+.+.-+++
T Consensus 145 lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~ 192 (307)
T COG3386 145 LYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDL 192 (307)
T ss_pred EEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEec
Confidence 44444212233333333334478899998854 445555577776654
No 371
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=68.57 E-value=4.4 Score=12.99 Aligned_cols=17 Identities=6% Similarity=0.151 Sum_probs=10.4
Q ss_pred cCcEEEEeeCCCCEEEe
Q psy11876 5 DTRVFATCSDDTTIALW 21 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~ 21 (68)
..++++.+...+.+++|
T Consensus 10 g~~~vavaTS~~~lRif 26 (27)
T PF12341_consen 10 GDSWVAVATSAGYLRIF 26 (27)
T ss_pred cCCEEEEEeCCCeEEec
Confidence 34566666666666665
No 372
>KOG2467|consensus
Probab=63.27 E-value=11 Score=20.58 Aligned_cols=20 Identities=30% Similarity=0.411 Sum_probs=16.9
Q ss_pred CCCEEEEEeCCCCEEEEeCC
Q psy11876 48 KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 48 ~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+..+++++.|..+.+||++
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr 359 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLR 359 (477)
T ss_pred cCceEecCCccceEEEEecc
Confidence 45578999999999999986
No 373
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=61.53 E-value=1.5 Score=13.54 Aligned_cols=6 Identities=33% Similarity=0.235 Sum_probs=3.1
Q ss_pred eeecCc
Q psy11876 2 IFLDTR 7 (68)
Q Consensus 2 ~~~~~~ 7 (68)
++|+|+
T Consensus 8 FSp~Gr 13 (23)
T PF10584_consen 8 FSPDGR 13 (23)
T ss_dssp BBTTSS
T ss_pred ECCCCe
Confidence 455554
No 374
>KOG3616|consensus
Probab=61.07 E-value=36 Score=20.93 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=21.6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 39 WVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.+..++-+|.++.++.+..|+.+++|+.
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~si~lfn~ 43 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGSIILFNF 43 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCcEEEEee
Confidence 3456677788888888888888888864
No 375
>KOG3616|consensus
Probab=59.89 E-value=39 Score=20.84 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=18.5
Q ss_pred ecCcEEEEeeCCCCEEEeecCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~ 25 (68)
|.++-++.+..|+.+.+++..+
T Consensus 24 p~~~s~v~~~~d~si~lfn~~~ 45 (1636)
T KOG3616|consen 24 PGGQSFVLAHQDGSIILFNFIP 45 (1636)
T ss_pred CCCceEEEEecCCcEEEEeecc
Confidence 6678899999999999988754
No 376
>KOG1897|consensus
Probab=58.26 E-value=44 Score=20.99 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=35.5
Q ss_pred eCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 13 SDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 13 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+-+..+++|++.+ ++.......+..++..+...-.+..++.++..+.+.+..+
T Consensus 845 ~In~~vrLye~t~-~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y 897 (1096)
T KOG1897|consen 845 GINQSVRLYEWTT-ERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQY 897 (1096)
T ss_pred ecCcEEEEEEccc-cceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEE
Confidence 4456888988876 4344444556666667777667778888887777666543
No 377
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=57.89 E-value=8.6 Score=12.70 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=16.1
Q ss_pred CCEEEEEEcCCCCEEE-EEeCC--CCEEEE
Q psy11876 38 NWVKNIEFSSKDNLLV-TAGFD--GSIYTW 64 (68)
Q Consensus 38 ~~~~~~~~~~~~~~~~-~~~~~--~~i~~~ 64 (68)
..-....|+|+++.++ +...+ +...||
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3446778999986665 44445 555555
No 378
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=57.25 E-value=26 Score=18.01 Aligned_cols=62 Identities=11% Similarity=0.237 Sum_probs=38.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEE-e-ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRT-L-QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.++.++.|+....+.++.+......... . ......+.++.+-+++..++.++.++.+.++.+
T Consensus 138 ~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~ 201 (321)
T PF03178_consen 138 FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRY 201 (321)
T ss_dssp ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE
T ss_pred cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEE
Confidence 4568888988888887755432221222 2 223445667666644468888888898887754
No 379
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=56.80 E-value=27 Score=18.08 Aligned_cols=52 Identities=25% Similarity=0.409 Sum_probs=30.3
Q ss_pred CCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC------CCCEEEEeC
Q psy11876 14 DDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF------DGSIYTWDI 66 (68)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~ 66 (68)
....+++|+.....+.. .-..-...|..+.|..+.++++.+.. ...+..||.
T Consensus 14 ~C~~lC~yd~~~~qW~~-~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~ 71 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSS-PGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDF 71 (281)
T ss_pred CCCEEEEEECCCCEeec-CCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEec
Confidence 35678889986532211 11124456788888866677777652 234555554
No 380
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=56.04 E-value=31 Score=18.60 Aligned_cols=29 Identities=31% Similarity=0.518 Sum_probs=22.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 39 WVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+..+...+..+.+.+...++.+.+|++.
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~ 219 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLG 219 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEe
Confidence 37777777767889999999999999874
No 381
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=54.21 E-value=9.2 Score=11.92 Aligned_cols=18 Identities=28% Similarity=0.246 Sum_probs=12.7
Q ss_pred EEEEeeCCCCEEEeecCC
Q psy11876 8 VFATCSDDTTIALWDARN 25 (68)
Q Consensus 8 ~~~~~~~~~~v~~~~~~~ 25 (68)
.++.+..++.+..++..+
T Consensus 8 ~v~~~~~~g~l~a~d~~~ 25 (33)
T smart00564 8 TVYVGSTDGTLYALDAKT 25 (33)
T ss_pred EEEEEcCCCEEEEEEccc
Confidence 566677778777777755
No 382
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=50.65 E-value=27 Score=16.31 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=21.6
Q ss_pred CEEEEEEcCCC------CEEEEEeCCCCEEEEeC
Q psy11876 39 WVKNIEFSSKD------NLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 39 ~~~~~~~~~~~------~~~~~~~~~~~i~~~~~ 66 (68)
.+..++|+|.| -.++..+.++.+.+|..
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~ 120 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGP 120 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEec
Confidence 56788999932 26778888999999864
No 383
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=50.45 E-value=39 Score=18.10 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=37.1
Q ss_pred eeecCcEEEEeeC---CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEE-EEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSD---DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLL-VTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~ 66 (68)
+.+++..++.+.. ++.+.+.+..+ ............+ ..+++.|.+..+ .+-..++.+.+.|.
T Consensus 123 ~~~~~~~vYV~n~~~~~~~vsvid~~t-~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~ 189 (381)
T COG3391 123 VDPDGKYVYVANAGNGNNTVSVIDAAT-NKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDT 189 (381)
T ss_pred ECCCCCEEEEEecccCCceEEEEeCCC-CeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeC
Confidence 4566666666666 45666666655 2333333333333 678889988644 44446677777764
No 384
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=48.14 E-value=20 Score=14.06 Aligned_cols=21 Identities=5% Similarity=-0.186 Sum_probs=15.3
Q ss_pred eecCcEEEEeeCCCCEEEeec
Q psy11876 3 FLDTRVFATCSDDTTIALWDA 23 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~ 23 (68)
+|-|.++++++..|...++-.
T Consensus 9 sPlG~l~l~a~e~gL~~i~f~ 29 (77)
T PF02870_consen 9 SPLGPLLLAASEKGLCGIDFE 29 (77)
T ss_dssp ETTEEEEEEEETTCEEEEEEE
T ss_pred CCCeEEEEEEECCeEEEEEEC
Confidence 566788888888886666544
No 385
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=45.45 E-value=50 Score=17.86 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=27.3
Q ss_pred EEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEe-CCCCEEEEeCCC
Q psy11876 18 IALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAG-FDGSIYTWDINK 68 (68)
Q Consensus 18 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~~~~~ 68 (68)
|.++|..+ ++.+..+.. ..++.++..+.+. .++.+.+ .++.+.++|..+
T Consensus 271 VWv~D~~t-~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~t 321 (342)
T PF06433_consen 271 VWVYDLKT-HKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAAT 321 (342)
T ss_dssp EEEEETTT-TEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred EEEEECCC-CeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcC
Confidence 44455554 333333332 2345678887764 4554444 568899998753
No 386
>KOG1920|consensus
Probab=45.26 E-value=84 Score=20.41 Aligned_cols=61 Identities=13% Similarity=0.186 Sum_probs=30.4
Q ss_pred ecCcEEEE---eeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEe
Q psy11876 4 LDTRVFAT---CSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWD 65 (68)
Q Consensus 4 ~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 65 (68)
.++..++. ......+.+|...+.++-...-..... ...+.|+|.. ..+.....+|...+++
T Consensus 299 s~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~-~~~~~W~p~~~~~L~v~~~sG~~~v~~ 363 (1265)
T KOG1920|consen 299 SNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQ-KALLMWDPVTEKTLHVLRESGQRLVRD 363 (1265)
T ss_pred CCCCceeeeecccccceEEEEEecCeEEEEEEEEeccc-cccccccCCCceeEEEEecCCcEEEEE
Confidence 34555655 444455889988765543332211111 1226777743 3333333556555554
No 387
>PRK13616 lipoprotein LpqB; Provisional
Probab=44.92 E-value=63 Score=18.85 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=17.7
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCCEEE
Q psy11876 37 SNWVKNIEFSSKDNLLVTAGFDGSIYT 63 (68)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~i~~ 63 (68)
...+..+.|+|++..++... ++++.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 45688999999997665543 345544
No 388
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=42.07 E-value=61 Score=17.90 Aligned_cols=64 Identities=14% Similarity=0.003 Sum_probs=24.3
Q ss_pred eeecC-cEEEEeeCCCCEEEeecCCCCcceEEeccCCC-CEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDT-RVFATCSDDTTIALWDARNLKTRVRTLQGHSN-WVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+..+| +++..+..++.-.+|.+.-....+.++..... ......++++.+.+.-......+.--|
T Consensus 43 ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vd 108 (386)
T PF14583_consen 43 FTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVD 108 (386)
T ss_dssp B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEE
T ss_pred cCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEE
Confidence 34566 45566666776666655322233334433221 111234456555543333333443333
No 389
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=41.24 E-value=55 Score=17.10 Aligned_cols=22 Identities=18% Similarity=0.157 Sum_probs=12.8
Q ss_pred ecCcEEEEeeCCCCEEEeecCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~ 25 (68)
.++.+|+++-.-..|.+.+..+
T Consensus 153 ~~G~yLiS~R~~~~i~~I~~~t 174 (299)
T PF14269_consen 153 DDGDYLISSRNTSTIYKIDPST 174 (299)
T ss_pred CCccEEEEecccCEEEEEECCC
Confidence 3556666666555666555444
No 390
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=39.68 E-value=34 Score=14.27 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=20.5
Q ss_pred EEEEEEcCCCCEE-EEEeCCCCEEEEeCC
Q psy11876 40 VKNIEFSSKDNLL-VTAGFDGSIYTWDIN 67 (68)
Q Consensus 40 ~~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 67 (68)
...+.++|+++.+ ++....+.|.+++.+
T Consensus 56 aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 56 ANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 3677889876554 566677899999865
No 391
>PHA02713 hypothetical protein; Provisional
Probab=37.54 E-value=83 Score=18.10 Aligned_cols=19 Identities=5% Similarity=0.337 Sum_probs=11.8
Q ss_pred CCCEEEEEeCCC--CEEEEeC
Q psy11876 48 KDNLLVTAGFDG--SIYTWDI 66 (68)
Q Consensus 48 ~~~~~~~~~~~~--~i~~~~~ 66 (68)
+++..+.|+.++ .+-.||.
T Consensus 512 ~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 512 DNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred CCEEEEEeeecceeehhhcCc
Confidence 667777777766 4444443
No 392
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=37.49 E-value=30 Score=13.09 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=12.7
Q ss_pred EEEEEEcCCCCEEEEEeC
Q psy11876 40 VKNIEFSSKDNLLVTAGF 57 (68)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~ 57 (68)
...+...|+++.++.+..
T Consensus 3 ~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGYV 20 (55)
T ss_pred eEEEEECCCCcEEEEEEe
Confidence 456777788888777753
No 393
>KOG2727|consensus
Probab=36.20 E-value=93 Score=19.83 Aligned_cols=39 Identities=8% Similarity=0.020 Sum_probs=24.6
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEc
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFS 46 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (68)
...++.|..+|.+++|.-. +........+..+|..+.+.
T Consensus 100 wtcVavGt~sGyV~FYTe~--Gvllf~Q~~~edPVl~lk~r 138 (1244)
T KOG2727|consen 100 WTCVAVGTSSGYVLFYTET--GVLLFKQIVHEDPVLKLKVR 138 (1244)
T ss_pred eeEEEEecccceEEEEecc--cHHHHHHHhccCccceEEEE
Confidence 3458999999999998653 22233333466666666553
No 394
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=34.76 E-value=24 Score=11.12 Aligned_cols=10 Identities=60% Similarity=1.145 Sum_probs=6.0
Q ss_pred CCCCEEEEeC
Q psy11876 57 FDGSIYTWDI 66 (68)
Q Consensus 57 ~~~~i~~~~~ 66 (68)
.|..+..||+
T Consensus 13 sdksi~hwdf 22 (28)
T PRK14751 13 SDKSIYHWDF 22 (28)
T ss_pred CcCceeeeee
Confidence 3556666764
No 395
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.22 E-value=84 Score=16.87 Aligned_cols=29 Identities=10% Similarity=0.194 Sum_probs=19.3
Q ss_pred cCCCCEEEEEEcCCCCEEEEEeCCCCEEE
Q psy11876 35 GHSNWVKNIEFSSKDNLLVTAGFDGSIYT 63 (68)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 63 (68)
+....+.++.|+|+.+.+.+........+
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iV 111 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIV 111 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEE
Confidence 33445889999998877766655544433
No 396
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=32.24 E-value=65 Score=16.65 Aligned_cols=55 Identities=7% Similarity=0.112 Sum_probs=32.3
Q ss_pred EEEeeCCCCEEEeecC-CCCcceEEecc----CCC-CEEEEEEcCCCCEEEEEeCCCCEEE
Q psy11876 9 FATCSDDTTIALWDAR-NLKTRVRTLQG----HSN-WVKNIEFSSKDNLLVTAGFDGSIYT 63 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~-~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 63 (68)
+..++.|..+.+.+.. ...+....... +.. -...--|..+|.+++++..++.++.
T Consensus 224 ~~~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g~i~~~~G~LvAs~~Qegl~r~ 284 (286)
T PRK10526 224 MQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRN 284 (286)
T ss_pred ceEEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEEEEECCCCCEEEEEEeeEEEEe
Confidence 4456777777766532 22333333322 222 2234457889999999988887764
No 397
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=31.66 E-value=46 Score=14.13 Aligned_cols=51 Identities=16% Similarity=0.132 Sum_probs=27.0
Q ss_pred EEEeeCCCCEEEeecCCC-CcceEEecc-----CCCCEEEEEEcCCCCEEEEEeCCC
Q psy11876 9 FATCSDDTTIALWDARNL-KTRVRTLQG-----HSNWVKNIEFSSKDNLLVTAGFDG 59 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 59 (68)
...++.|..+.+.+.... ......... .......--|.++|+++++...++
T Consensus 46 ~~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~~~G~LvAs~~Q~~ 102 (104)
T cd03444 46 SASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFTRDGELVASVAQEG 102 (104)
T ss_pred cceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEECCCCCEEEEEEEee
Confidence 356677777776554321 222222221 112223445788888888876554
No 398
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=30.84 E-value=1.3e+02 Score=18.38 Aligned_cols=59 Identities=12% Similarity=0.231 Sum_probs=38.2
Q ss_pred CcEEEEeeCCCCEEEeecCCC------C-------------cceEEeccCCCCEEEEEEc--CCCCEEEEEeCCCCEEEE
Q psy11876 6 TRVFATCSDDTTIALWDARNL------K-------------TRVRTLQGHSNWVKNIEFS--SKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~------~-------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~ 64 (68)
...++.+..||.|.+|..... . .|...+. .....+.++++ ...++++.++....|.||
T Consensus 114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 457899999999999975310 0 0122222 23356778877 667788888777777776
Q ss_pred e
Q psy11876 65 D 65 (68)
Q Consensus 65 ~ 65 (68)
-
T Consensus 193 a 193 (717)
T PF08728_consen 193 A 193 (717)
T ss_pred E
Confidence 4
No 399
>KOG2247|consensus
Probab=29.69 E-value=1.2e+02 Score=17.75 Aligned_cols=48 Identities=13% Similarity=0.254 Sum_probs=29.3
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEE
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVT 54 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 (68)
...++.+...+.+.++...+.+ .....--|...+..+++.+++..+..
T Consensus 129 ~~el~ig~~~gn~viynhgtsR-~iiv~Gkh~RRgtq~av~lEd~vil~ 176 (615)
T KOG2247|consen 129 TPELVIGNNAGNIVIYNHGTSR-RIIVMGKHQRRGTQIAVTLEDYVILC 176 (615)
T ss_pred CccccccccccceEEEeccchh-hhhhhcccccceeEEEecccceeeec
Confidence 3455666667888888876632 22222226677778888887655443
No 400
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=29.48 E-value=39 Score=11.91 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=16.9
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcc
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTR 29 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~ 29 (68)
..++.++.+..+.-+.+.|+.....|
T Consensus 9 v~g~yaYva~~~~Gl~IvDISnPs~P 34 (42)
T PF08309_consen 9 VSGNYAYVADGNNGLVIVDISNPSNP 34 (42)
T ss_pred EECCEEEEEeCCCCEEEEECCCCCCC
Confidence 34667777766667788888654433
No 401
>KOG0183|consensus
Probab=29.19 E-value=28 Score=17.50 Aligned_cols=7 Identities=14% Similarity=0.093 Sum_probs=4.2
Q ss_pred eeecCcE
Q psy11876 2 IFLDTRV 8 (68)
Q Consensus 2 ~~~~~~~ 8 (68)
|||||.+
T Consensus 11 FSPDGhL 17 (249)
T KOG0183|consen 11 FSPDGHL 17 (249)
T ss_pred ECCCCCE
Confidence 5666654
No 402
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=28.84 E-value=1.2e+02 Score=17.35 Aligned_cols=29 Identities=17% Similarity=0.136 Sum_probs=17.6
Q ss_pred eeecCcEE-EEeeCCCCEEEeecCCCCcce
Q psy11876 2 IFLDTRVF-ATCSDDTTIALWDARNLKTRV 30 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~ 30 (68)
+|.|.++| ++...+|.++.||+.....+.
T Consensus 319 iSlDDrfLYvs~W~~GdvrqYDISDP~~Pk 348 (461)
T PF05694_consen 319 ISLDDRFLYVSNWLHGDVRQYDISDPFNPK 348 (461)
T ss_dssp E-TTS-EEEEEETTTTEEEEEE-SSTTS-E
T ss_pred EccCCCEEEEEcccCCcEEEEecCCCCCCc
Confidence 56677766 566677999999997544443
No 403
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=28.75 E-value=95 Score=16.13 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=30.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC---cceEEeccC--CCCEEEEEEcC--CCCEEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK---TRVRTLQGH--SNWVKNIEFSS--KDNLLVTAG 56 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~ 56 (68)
+.++|..+++-...+.|..|+..... ......... -..+..+.+.+ ++.+.+...
T Consensus 193 ~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn 254 (287)
T PF03022_consen 193 IDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLSN 254 (287)
T ss_dssp EETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred ECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEEC
Confidence 34567777788888889999886511 111112222 24567888888 666555443
No 404
>PF09142 TruB_C: tRNA Pseudouridine synthase II, C terminal; InterPro: IPR015225 Pseudouridine synthases catalyse the isomerisation of uridine to pseudouridine (Psi) in a variety of RNA molecules, and may function as RNA chaperones. Pseudouridine is the most abundant modified nucleotide found in all cellular RNAs. There are four distinct families of pseudouridine synthases that share no global sequence similarity, but which do share the same fold of their catalytic domain(s) and uracil-binding site and are descended from a common molecular ancestor. The catalytic domain consists of two subdomains, each of which has an alpha+beta structure that has some similarity to the ferredoxin-like fold (note: some pseudouridine synthases contain additional domains). The active site is the most conserved structural region of the superfamily and is located between the two homologous domains. These families are []: Pseudouridine synthase I, TruA. Pseudouridine synthase II, TruB, which contains and additional C-terminal PUA domain. Pseudouridine synthase RsuA (ribosomal small subunit) and RluC/RluD (ribosomal large subunits), both of which contain an additional N-terminal alpha-L RNA-binding motif. Pseudouridine synthase TruD, which has a natural circular permutation in the catalytic domain, as well as an insertion of a family-specific alpha+beta subdomain. TruB is responsible for the pseudouridine residue present in the T loops of virtually all tRNAs. TruB recognises the preformed 3-D structure of the T loop primarily through shape complementarity. It accesses its substrate uridyl residue by flipping out the nucleotide and disrupts the tertiary structure of tRNA []. The C-terminal domain adopts a secondary structure consisting of a four-stranded beta sheet and one alpha helix, similar to that found in PUA domains. It is predominantly involved in RNA-binding, being mostly found in tRNA pseudouridine synthase B (TruB) []. ; GO: 0003723 RNA binding, 0009982 pseudouridine synthase activity, 0001522 pseudouridine synthesis, 0009451 RNA modification; PDB: 1SGV_B.
Probab=25.38 E-value=56 Score=12.32 Aligned_cols=6 Identities=33% Similarity=0.440 Sum_probs=1.9
Q ss_pred ecCcEE
Q psy11876 4 LDTRVF 9 (68)
Q Consensus 4 ~~~~~~ 9 (68)
|+|+.+
T Consensus 34 pdG~lv 39 (56)
T PF09142_consen 34 PDGRLV 39 (56)
T ss_dssp TTS-EE
T ss_pred CCCcEE
Confidence 344333
No 405
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=25.25 E-value=44 Score=11.06 Aligned_cols=17 Identities=18% Similarity=0.147 Sum_probs=12.3
Q ss_pred EEEeeCCCCEEEeecCC
Q psy11876 9 FATCSDDTTIALWDARN 25 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~~ 25 (68)
++.+..++.+.-.|..+
T Consensus 3 v~~~~~~g~l~AlD~~T 19 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKT 19 (38)
T ss_dssp EEEETTTSEEEEEETTT
T ss_pred EEEeCCCCEEEEEECCC
Confidence 45557778888788776
No 406
>KOG1983|consensus
Probab=24.50 E-value=1.8e+02 Score=18.56 Aligned_cols=22 Identities=32% Similarity=0.516 Sum_probs=18.3
Q ss_pred cCCCCEEEEEeCCCCEEEEeCC
Q psy11876 46 SSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 46 ~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+++..++++..|+.+..||..
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s 264 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVS 264 (993)
T ss_pred ccCCceEEEEEecCCEEeeecC
Confidence 4567888999999999999875
No 407
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=23.83 E-value=1.2e+02 Score=15.76 Aligned_cols=56 Identities=25% Similarity=0.238 Sum_probs=31.2
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEE---EEcCCCCEEEEEeCCCCEEE
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNI---EFSSKDNLLVTAGFDGSIYT 63 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~ 63 (68)
..++.|.+++.+.+.+... .........-.-++.-. .+......++..+.||.+.+
T Consensus 196 scLViGTE~~~i~iLd~~a-f~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~ 254 (257)
T PF14779_consen 196 SCLVIGTESGEIYILDPQA-FTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYT 254 (257)
T ss_pred ceEEEEecCCeEEEECchh-heeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEE
Confidence 5789999999999988865 22232332222222211 12212334566677887764
No 408
>KOG1559|consensus
Probab=22.97 E-value=1.3e+02 Score=15.77 Aligned_cols=23 Identities=17% Similarity=0.300 Sum_probs=16.1
Q ss_pred eEEeccCCCCEEEEEEcCCCCEE
Q psy11876 30 VRTLQGHSNWVKNIEFSSKDNLL 52 (68)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~ 52 (68)
+.+..+...+|..++|+|+..-+
T Consensus 251 vSTv~~~kYPvtgfQWHPEKnaf 273 (340)
T KOG1559|consen 251 VSTVESKKYPVTGFQWHPEKNAF 273 (340)
T ss_pred EEeecceeccceeeeecCccCcc
Confidence 34455667788899999976543
No 409
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=22.89 E-value=1.7e+02 Score=17.12 Aligned_cols=57 Identities=11% Similarity=0.093 Sum_probs=29.5
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+-+++-+.+|.+..+.... ..+.......+ ....++++|.+..+..- ..+.++++.+
T Consensus 329 kgF~~l~~~G~L~~f~st~-~~~lL~~~~~~-~~~~~~~Sp~~~~Ll~e-~~gki~~~~l 385 (733)
T COG4590 329 KGFYSLYRNGTLQSFYSTS-EKLLLFERAYQ-APQLVAMSPNQAYLLSE-DQGKIRLAQL 385 (733)
T ss_pred ceEEEEcCCCceeeeeccc-Ccceehhhhhc-CcceeeeCcccchheee-cCCceEEEEe
Confidence 3456666666666554433 22222222222 34566778876555443 3466666654
No 410
>KOG2114|consensus
Probab=22.52 E-value=2.2e+02 Score=18.11 Aligned_cols=49 Identities=8% Similarity=0.048 Sum_probs=27.4
Q ss_pred eecCcEEEEeeCCCCEEEeecCCC---CcceEEeccCCCCEEEEEEcCCCCE
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNL---KTRVRTLQGHSNWVKNIEFSSKDNL 51 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (68)
+.+-+.++.|-.+|.|..+.-... +...........+|..+.+.-++..
T Consensus 134 s~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s 185 (933)
T KOG2114|consen 134 SEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKS 185 (933)
T ss_pred EccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCce
Confidence 334567888999998887654321 1112222234456777776555443
No 411
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=22.35 E-value=2.2e+02 Score=18.15 Aligned_cols=48 Identities=8% Similarity=0.007 Sum_probs=24.1
Q ss_pred eeecCcEEEE-eeCCC-----CEEEeecCCCCcceEEeccCCCCEEEEEEcCCC
Q psy11876 2 IFLDTRVFAT-CSDDT-----TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD 49 (68)
Q Consensus 2 ~~~~~~~~~~-~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (68)
++||++.++- .+.++ .|.+.++.+.......+......|......+.+
T Consensus 357 ~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e~g 410 (912)
T TIGR02171 357 ISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLENG 410 (912)
T ss_pred CCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecCCC
Confidence 5788877654 33333 366666665433333444444444444444433
No 412
>KOG4521|consensus
Probab=21.88 E-value=1.4e+02 Score=19.70 Aligned_cols=19 Identities=11% Similarity=0.286 Sum_probs=16.8
Q ss_pred cEEEEeeCCCCEEEeecCC
Q psy11876 7 RVFATCSDDTTIALWDARN 25 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~ 25 (68)
+++++-..||.+++|++.+
T Consensus 284 ~fifaL~rDg~LR~Wsv~t 302 (1480)
T KOG4521|consen 284 NFIFALTRDGWLRAWSVET 302 (1480)
T ss_pred eEEEEEecCCeEEeeehhh
Confidence 4788889999999999876
No 413
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=21.55 E-value=2.1e+02 Score=17.53 Aligned_cols=22 Identities=27% Similarity=0.525 Sum_probs=18.3
Q ss_pred eee-cCcEEEEeeCCCCEEEeec
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDA 23 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~ 23 (68)
|.| +.+.||.-+..|.-.+|++
T Consensus 153 FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 153 FNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred eccCccceEEEEeccCcEEEEEe
Confidence 445 4568999999999999999
No 414
>PF14795 Leucyl-specific: Leucine-tRNA synthetase-specific domain; PDB: 1OBC_A 2BTE_A 2V0G_A 2BYT_A 1OBH_A 1H3N_A 2V0C_A.
Probab=20.84 E-value=73 Score=12.06 Aligned_cols=9 Identities=33% Similarity=0.815 Sum_probs=6.6
Q ss_pred CCCCEEEEe
Q psy11876 57 FDGSIYTWD 65 (68)
Q Consensus 57 ~~~~i~~~~ 65 (68)
.||++.+|.
T Consensus 47 edG~~h~WK 55 (56)
T PF14795_consen 47 EDGTLHFWK 55 (56)
T ss_dssp TTSSEEEEE
T ss_pred CCCeEeecC
Confidence 577888875
No 415
>PF14157 YmzC: YmzC-like protein; PDB: 3KVP_E.
Probab=20.53 E-value=82 Score=12.49 Aligned_cols=18 Identities=22% Similarity=0.418 Sum_probs=9.1
Q ss_pred cEEEEeeCCCCEEEeecC
Q psy11876 7 RVFATCSDDTTIALWDAR 24 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~ 24 (68)
+.|+.-+.++.+++|...
T Consensus 30 N~Fav~~e~~~iKIfkyd 47 (63)
T PF14157_consen 30 NHFAVVDEDGQIKIFKYD 47 (63)
T ss_dssp TEEEEE-ETTEEEEEEEE
T ss_pred CEEEEEecCCeEEEEEeC
Confidence 344444455666665553
No 416
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only]
Probab=20.24 E-value=2e+02 Score=16.75 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=22.5
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 36 HSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
+...+..++.+|.+..+...+.+|.+.+-
T Consensus 282 ~~~~VrtFCmcP~G~VV~e~~e~g~~~vN 310 (486)
T COG2509 282 YGDGVRTFCMCPGGEVVAENYEDGFVVVN 310 (486)
T ss_pred CCCeEEEEEECCCCeEEeeeccCceEEEc
Confidence 46678899999999888888877776543
No 417
>PF00352 TBP: Transcription factor TFIID (or TATA-binding protein, TBP); InterPro: IPR000814 The TATA-box binding protein (TBP) is required for the initiation of transcription by RNA polymerases I, II and III, from promoters with or without a TATA box [, ]. TBP associates with a host of factors, including the general transcription factors TFIIA, -B, -D, -E, and -H, to form huge multi-subunit pre-initiation complexes on the core promoter. Through its association with different transcription factors, TBP can initiate transcription from different RNA polymerases. There are several related TBPs, including TBP-like (TBPL) proteins []. The C-terminal core of TBP (~180 residues) is highly conserved and contains two 77-amino acid repeats that produce a saddle-shaped structure that straddles the DNA; this region binds to the TATA box and interacts with transcription factors and regulatory proteins []. By contrast, the N-terminal region varies in both length and sequence.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0006367 transcription initiation from RNA polymerase II promoter; PDB: 1D3U_A 1PCZ_B 1AIS_A 1NGM_A 1TBP_A 1TBA_B 1YTB_A 1RM1_A 1YTF_A 1NH2_A ....
Probab=20.17 E-value=89 Score=12.76 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=6.1
Q ss_pred eeecCcEEEEee
Q psy11876 2 IFLDTRVFATCS 13 (68)
Q Consensus 2 ~~~~~~~~~~~~ 13 (68)
++++|+.+++|.
T Consensus 54 IF~sGki~itGa 65 (86)
T PF00352_consen 54 IFSSGKIVITGA 65 (86)
T ss_dssp EETTSEEEEEEE
T ss_pred EEcCCEEEEEec
Confidence 344555555554
Done!