Query psy11876
Match_columns 68
No_of_seqs 107 out of 2666
Neff 12.5
Searched_HMMs 29240
Date Fri Aug 16 21:13:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.8 8.9E-19 3.1E-23 84.5 9.7 65 2-67 277-342 (365)
2 2ynn_A Coatomer subunit beta'; 99.7 5.6E-16 1.9E-20 73.2 9.2 65 2-67 63-127 (304)
3 3ow8_A WD repeat-containing pr 99.7 1.3E-15 4.4E-20 72.6 10.3 65 2-67 214-278 (321)
4 3vu4_A KMHSV2; beta-propeller 99.7 1.1E-15 3.7E-20 73.6 10.1 65 2-67 203-270 (355)
5 3ow8_A WD repeat-containing pr 99.7 1.4E-15 4.8E-20 72.5 9.9 65 2-67 256-320 (321)
6 4gqb_B Methylosome protein 50; 99.7 2.2E-15 7.6E-20 72.5 10.4 65 2-67 135-200 (344)
7 1got_B GT-beta; complex (GTP-b 99.7 2.6E-15 8.8E-20 71.9 10.5 65 2-67 192-256 (340)
8 3frx_A Guanine nucleotide-bind 99.7 2.2E-15 7.6E-20 71.6 9.9 65 2-67 73-137 (319)
9 2xzm_R RACK1; ribosome, transl 99.7 3.1E-15 1.1E-19 71.6 10.1 65 2-67 84-148 (343)
10 4ggc_A P55CDC, cell division c 99.7 2.6E-15 8.8E-20 70.6 9.5 65 2-67 248-314 (318)
11 1erj_A Transcriptional repress 99.7 3E-15 1E-19 72.8 10.0 66 2-68 131-196 (393)
12 1vyh_C Platelet-activating fac 99.7 2.1E-15 7.2E-20 73.7 9.3 65 2-67 116-180 (410)
13 2ymu_A WD-40 repeat protein; u 99.7 1.5E-15 5E-20 76.1 8.8 65 1-67 23-87 (577)
14 2ynn_A Coatomer subunit beta'; 99.7 4.8E-15 1.6E-19 70.1 9.8 62 5-67 197-258 (304)
15 3iz6_a 40S ribosomal protein R 99.7 4E-15 1.4E-19 72.1 9.5 63 5-67 217-279 (380)
16 1got_B GT-beta; complex (GTP-b 99.7 3.5E-15 1.2E-19 71.4 9.0 63 2-65 278-340 (340)
17 1vyh_C Platelet-activating fac 99.6 1.9E-15 6.4E-20 73.9 7.5 65 2-67 346-410 (410)
18 2pm7_B Protein transport prote 99.6 7.1E-15 2.4E-19 69.3 9.1 66 2-67 17-85 (297)
19 4gga_A P55CDC, cell division c 99.6 6.4E-15 2.2E-19 72.0 9.2 65 2-67 328-394 (420)
20 4g56_B MGC81050 protein; prote 99.6 5.8E-15 2E-19 71.2 8.9 64 2-67 277-342 (357)
21 3fm0_A Protein CIAO1; WDR39,SG 99.6 1.2E-14 4E-19 69.7 9.7 66 2-67 69-135 (345)
22 2pbi_B Guanine nucleotide-bind 99.6 1.9E-14 6.4E-19 69.3 10.4 62 5-67 209-270 (354)
23 4ery_A WD repeat-containing pr 99.6 1.8E-14 6.2E-19 68.0 10.1 65 2-67 31-95 (312)
24 2pbi_B Guanine nucleotide-bind 99.6 8.4E-15 2.9E-19 70.5 8.9 63 2-65 292-354 (354)
25 4gqb_B Methylosome protein 50; 99.6 9E-15 3.1E-19 70.4 8.9 64 3-67 223-288 (344)
26 4ery_A WD repeat-containing pr 99.6 2.3E-14 7.7E-19 67.7 10.1 65 2-67 73-137 (312)
27 3lrv_A PRE-mRNA-splicing facto 99.6 1.7E-14 5.7E-19 69.1 9.7 66 2-68 178-244 (343)
28 3iz6_a 40S ribosomal protein R 99.6 1.2E-14 4E-19 70.5 9.2 65 2-67 306-374 (380)
29 1nr0_A Actin interacting prote 99.6 1.5E-14 5.1E-19 73.5 9.9 65 2-67 198-269 (611)
30 3vl1_A 26S proteasome regulato 99.6 2.1E-14 7.2E-19 69.7 10.0 65 2-67 147-211 (420)
31 3zwl_B Eukaryotic translation 99.6 2.1E-14 7.1E-19 68.4 9.7 65 2-67 40-104 (369)
32 2hes_X YDR267CP; beta-propelle 99.6 2E-14 6.8E-19 68.6 9.5 65 2-66 115-182 (330)
33 2hes_X YDR267CP; beta-propelle 99.6 3.2E-14 1.1E-18 67.9 10.0 66 2-67 66-137 (330)
34 2w18_A PALB2, fancn, partner a 99.6 9.7E-15 3.3E-19 70.8 8.1 60 7-67 296-356 (356)
35 2ymu_A WD-40 repeat protein; u 99.6 9.2E-15 3.1E-19 73.2 7.7 62 2-65 516-577 (577)
36 3bg1_A Protein SEC13 homolog; 99.6 1.4E-14 4.8E-19 68.8 7.8 66 2-67 21-89 (316)
37 3dm0_A Maltose-binding peripla 99.6 2.6E-14 8.9E-19 73.3 9.2 65 2-67 438-502 (694)
38 4e54_B DNA damage-binding prot 99.6 1.9E-14 6.4E-19 70.7 7.9 66 2-67 127-195 (435)
39 3fm0_A Protein CIAO1; WDR39,SG 99.6 2.7E-14 9.3E-19 68.5 8.3 66 2-67 24-91 (345)
40 3vl1_A 26S proteasome regulato 99.6 5.1E-14 1.8E-18 68.4 9.0 65 2-67 105-169 (420)
41 1nr0_A Actin interacting prote 99.6 1.3E-13 4.4E-18 70.2 10.4 65 2-67 155-220 (611)
42 3frx_A Guanine nucleotide-bind 99.6 1.2E-13 4.2E-18 65.7 9.8 62 5-67 165-226 (319)
43 4g56_B MGC81050 protein; prote 99.6 8.4E-14 2.9E-18 67.2 9.3 65 2-67 147-212 (357)
44 2xzm_R RACK1; ribosome, transl 99.6 1.5E-13 5.1E-18 65.8 9.9 63 5-67 38-106 (343)
45 4gq1_A NUP37; propeller, trans 99.6 2.9E-14 9.9E-19 69.4 7.4 62 5-67 155-217 (393)
46 3f3f_A Nucleoporin SEH1; struc 99.6 1.1E-13 3.8E-18 65.3 9.2 66 2-67 19-89 (351)
47 2aq5_A Coronin-1A; WD40 repeat 99.6 1.5E-13 5.2E-18 66.8 9.8 67 2-68 89-163 (402)
48 3mmy_A MRNA export factor; mRN 99.6 1E-13 3.4E-18 66.1 9.0 66 2-67 47-116 (368)
49 3k26_A Polycomb protein EED; W 99.6 2.6E-13 9E-18 64.7 10.4 66 2-68 123-192 (366)
50 3k26_A Polycomb protein EED; W 99.6 2.1E-13 7.2E-18 65.0 10.0 65 2-67 77-146 (366)
51 2oaj_A Protein SNI1; WD40 repe 99.6 5.2E-14 1.8E-18 74.3 8.4 66 1-67 495-604 (902)
52 3sfz_A APAF-1, apoptotic pepti 99.6 1.3E-13 4.4E-18 73.9 9.7 65 2-67 623-687 (1249)
53 3f3f_A Nucleoporin SEH1; struc 99.6 8.1E-14 2.8E-18 65.8 8.1 66 2-67 222-336 (351)
54 4aow_A Guanine nucleotide-bind 99.6 2.5E-13 8.4E-18 64.4 9.7 66 2-67 46-116 (340)
55 3gre_A Serine/threonine-protei 99.5 2.5E-13 8.5E-18 66.5 9.8 63 4-67 180-244 (437)
56 2aq5_A Coronin-1A; WD40 repeat 99.5 1.9E-13 6.5E-18 66.4 9.4 66 2-68 139-207 (402)
57 1erj_A Transcriptional repress 99.5 2.2E-13 7.6E-18 66.3 9.6 65 2-67 214-286 (393)
58 3v7d_B Cell division control p 99.5 4E-13 1.4E-17 66.1 10.2 65 2-68 128-192 (464)
59 3lrv_A PRE-mRNA-splicing facto 99.5 2.7E-13 9.1E-18 64.9 9.2 66 2-68 133-201 (343)
60 2pm7_B Protein transport prote 99.5 2.1E-13 7.1E-18 64.4 8.8 62 6-67 170-237 (297)
61 3dwl_C Actin-related protein 2 99.5 1.4E-14 4.8E-19 69.6 4.9 66 2-67 19-85 (377)
62 2j04_A TAU60, YPL007P, hypothe 99.5 1.4E-13 4.6E-18 70.3 8.4 65 1-67 136-210 (588)
63 3v7d_B Cell division control p 99.5 7.2E-13 2.5E-17 65.2 10.6 65 2-67 276-340 (464)
64 3jrp_A Fusion protein of prote 99.5 1.1E-13 3.7E-18 66.2 7.3 66 2-67 19-87 (379)
65 1pgu_A Actin interacting prote 99.5 3.9E-13 1.3E-17 67.6 9.5 65 2-67 496-571 (615)
66 2j04_B YDR362CP, TAU91; beta p 99.5 5.8E-14 2E-18 70.9 6.5 65 2-67 363-427 (524)
67 1pgu_A Actin interacting prote 99.5 1.8E-13 6E-18 68.9 8.1 62 5-67 552-613 (615)
68 3dm0_A Maltose-binding peripla 99.5 5.3E-13 1.8E-17 68.6 10.0 64 3-67 526-591 (694)
69 2oit_A Nucleoporin 214KDA; NH2 99.5 3.3E-13 1.1E-17 66.7 8.8 65 2-67 157-222 (434)
70 1gxr_A ESG1, transducin-like e 99.5 9.3E-13 3.2E-17 62.2 10.0 65 2-67 149-213 (337)
71 1k8k_C P40, ARP2/3 complex 41 99.5 2.9E-13 9.8E-18 64.8 8.1 65 2-67 16-82 (372)
72 1sq9_A Antiviral protein SKI8; 99.5 4.6E-13 1.6E-17 64.7 8.8 65 2-67 299-394 (397)
73 2pm9_A Protein WEB1, protein t 99.5 1.9E-13 6.4E-18 66.3 7.2 65 2-67 270-336 (416)
74 3mkq_A Coatomer beta'-subunit; 99.5 3.6E-13 1.2E-17 69.7 8.5 65 2-67 21-85 (814)
75 3zwl_B Eukaryotic translation 99.5 1.1E-12 3.7E-17 62.6 9.6 66 2-67 183-248 (369)
76 1sq9_A Antiviral protein SKI8; 99.5 5.1E-13 1.7E-17 64.5 8.4 65 2-67 241-321 (397)
77 3odt_A Protein DOA1; ubiquitin 99.5 1.2E-12 4E-17 61.4 9.4 64 3-67 26-89 (313)
78 3dwl_C Actin-related protein 2 99.5 1.3E-13 4.4E-18 66.3 6.2 66 2-67 63-130 (377)
79 3ei3_B DNA damage-binding prot 99.5 9E-13 3.1E-17 63.6 9.0 64 2-67 171-235 (383)
80 2j04_A TAU60, YPL007P, hypothe 99.5 3.4E-13 1.2E-17 68.9 7.7 62 2-67 93-159 (588)
81 4aow_A Guanine nucleotide-bind 99.5 2E-12 6.8E-17 61.3 9.9 62 6-68 185-246 (340)
82 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.8E-12 6E-17 64.0 10.0 65 2-68 203-271 (450)
83 4ggc_A P55CDC, cell division c 99.5 2E-12 7E-17 60.8 9.8 61 6-68 36-98 (318)
84 3bg1_A Protein SEC13 homolog; 99.5 8.4E-13 2.9E-17 62.8 8.5 61 7-67 229-292 (316)
85 3dw8_B Serine/threonine-protei 99.5 5E-13 1.7E-17 65.3 7.7 66 2-67 36-125 (447)
86 4gq1_A NUP37; propeller, trans 99.5 9.9E-14 3.4E-18 67.6 5.2 65 3-67 98-174 (393)
87 4a11_B DNA excision repair pro 99.5 2.8E-12 9.5E-17 61.9 10.1 66 2-67 253-364 (408)
88 3mkq_A Coatomer beta'-subunit; 99.5 1E-12 3.5E-17 68.0 8.8 65 2-67 63-127 (814)
89 4aez_A CDC20, WD repeat-contai 99.5 4.5E-12 1.5E-16 61.8 10.6 64 5-68 185-248 (401)
90 1yfq_A Cell cycle arrest prote 99.5 2.3E-12 7.9E-17 61.2 9.4 66 2-67 201-281 (342)
91 3i2n_A WD repeat-containing pr 99.5 6.9E-13 2.4E-17 63.1 7.5 67 2-68 267-353 (357)
92 1r5m_A SIR4-interacting protei 99.5 4.7E-12 1.6E-16 61.3 10.4 64 2-67 116-179 (425)
93 4gga_A P55CDC, cell division c 99.5 4.4E-12 1.5E-16 62.1 10.2 61 6-68 116-178 (420)
94 2j04_B YDR362CP, TAU91; beta p 99.5 9.7E-13 3.3E-17 66.5 8.0 62 6-67 277-341 (524)
95 2oaj_A Protein SNI1; WD40 repe 99.5 8.7E-13 3E-17 69.8 8.0 66 2-67 443-518 (902)
96 3mmy_A MRNA export factor; mRN 99.5 2.3E-12 7.9E-17 61.4 8.8 64 2-67 94-159 (368)
97 3odt_A Protein DOA1; ubiquitin 99.4 3.4E-12 1.2E-16 59.9 9.0 63 2-67 192-254 (313)
98 1r5m_A SIR4-interacting protei 99.4 1.1E-12 3.9E-17 63.4 7.5 65 2-67 338-424 (425)
99 2pm9_A Protein WEB1, protein t 99.4 9.7E-13 3.3E-17 63.8 7.2 66 2-67 75-144 (416)
100 4e54_B DNA damage-binding prot 99.4 1.3E-12 4.5E-17 64.2 7.7 64 2-67 217-281 (435)
101 2xyi_A Probable histone-bindin 99.4 2.8E-12 9.5E-17 63.1 8.8 66 2-67 285-352 (430)
102 1gxr_A ESG1, transducin-like e 99.4 8E-12 2.7E-16 59.1 10.1 66 2-67 105-171 (337)
103 4a11_B DNA excision repair pro 99.4 8.8E-12 3E-16 60.2 10.3 66 2-67 194-275 (408)
104 3dw8_B Serine/threonine-protei 99.4 5.6E-12 1.9E-16 61.7 9.7 64 2-67 234-314 (447)
105 1k8k_C P40, ARP2/3 complex 41 99.4 3.6E-12 1.2E-16 61.0 8.9 66 2-67 150-232 (372)
106 3ei3_B DNA damage-binding prot 99.4 2.4E-12 8.3E-17 62.1 8.3 65 2-67 81-149 (383)
107 1yfq_A Cell cycle arrest prote 99.4 2.9E-12 9.8E-17 60.9 8.4 65 2-66 19-86 (342)
108 3jrp_A Fusion protein of prote 99.4 4.9E-12 1.7E-16 60.5 9.2 62 6-67 69-133 (379)
109 3jro_A Fusion protein of prote 99.4 1.1E-12 3.7E-17 68.2 7.1 66 2-67 17-85 (753)
110 1p22_A F-BOX/WD-repeat protein 99.4 1E-11 3.5E-16 61.0 9.7 63 2-67 139-201 (435)
111 3gre_A Serine/threonine-protei 99.4 7.9E-13 2.7E-17 64.7 5.8 65 2-67 222-291 (437)
112 4h5i_A Guanine nucleotide-exch 99.4 7.4E-12 2.5E-16 60.7 8.8 67 2-68 227-300 (365)
113 2xyi_A Probable histone-bindin 99.4 1.4E-11 4.7E-16 60.6 9.9 67 2-68 239-309 (430)
114 3i2n_A WD repeat-containing pr 99.4 3.6E-12 1.2E-16 60.7 7.6 62 6-67 80-147 (357)
115 2ovr_B FBW7, F-BOX/WD repeat p 99.4 1.5E-11 5E-16 60.6 9.8 63 2-67 125-187 (445)
116 3sfz_A APAF-1, apoptotic pepti 99.4 1E-11 3.5E-16 66.8 9.8 65 2-67 665-731 (1249)
117 4aez_A CDC20, WD repeat-contai 99.4 1.4E-11 4.7E-16 60.1 9.3 65 2-67 225-292 (401)
118 3vu4_A KMHSV2; beta-propeller 99.4 2.2E-11 7.6E-16 58.8 9.5 56 12-67 155-226 (355)
119 3jro_A Fusion protein of prote 99.4 1.8E-11 6.1E-16 63.8 9.2 65 3-67 62-131 (753)
120 2oit_A Nucleoporin 214KDA; NH2 99.3 1.6E-12 5.6E-17 64.3 4.5 66 2-67 100-180 (434)
121 2vdu_B TRNA (guanine-N(7)-)-me 99.3 8.5E-12 2.9E-16 61.6 6.8 66 2-67 157-228 (450)
122 1p22_A F-BOX/WD-repeat protein 99.3 2.2E-10 7.7E-15 56.4 10.2 61 4-67 181-241 (435)
123 2w18_A PALB2, fancn, partner a 99.3 5.2E-11 1.8E-15 58.1 7.5 62 5-67 192-268 (356)
124 2ovr_B FBW7, F-BOX/WD repeat p 99.3 1.9E-10 6.5E-15 56.6 9.3 64 3-67 369-441 (445)
125 3bws_A Protein LP49; two-domai 99.1 1.2E-09 4.2E-14 53.4 8.0 64 3-67 178-242 (433)
126 3bws_A Protein LP49; two-domai 99.0 1E-09 3.5E-14 53.7 5.5 65 2-67 130-199 (433)
127 1l0q_A Surface layer protein; 99.0 7.9E-09 2.7E-13 50.1 8.1 64 2-67 39-104 (391)
128 1l0q_A Surface layer protein; 99.0 2.1E-08 7.2E-13 48.6 9.0 64 2-67 207-274 (391)
129 2hqs_A Protein TOLB; TOLB, PAL 98.9 7.2E-08 2.5E-12 47.7 10.1 64 2-67 186-255 (415)
130 1nir_A Nitrite reductase; hemo 98.9 2.3E-08 7.8E-13 51.1 8.4 63 2-66 145-207 (543)
131 1nir_A Nitrite reductase; hemo 98.9 4.5E-08 1.5E-12 50.0 8.4 64 2-67 186-256 (543)
132 1k32_A Tricorn protease; prote 98.9 2.2E-08 7.4E-13 54.0 7.6 65 2-67 386-460 (1045)
133 3o4h_A Acylamino-acid-releasin 98.9 3.6E-08 1.2E-12 50.2 7.7 64 2-67 157-226 (582)
134 2ecf_A Dipeptidyl peptidase IV 98.7 1.6E-07 5.6E-12 48.9 7.2 64 2-67 44-137 (741)
135 1pby_B Quinohemoprotein amine 98.7 4.1E-07 1.4E-11 43.1 7.8 62 2-67 248-309 (337)
136 2ojh_A Uncharacterized protein 98.7 2.8E-07 9.6E-12 42.8 6.8 66 2-67 180-257 (297)
137 1xfd_A DIP, dipeptidyl aminope 98.7 9.2E-08 3.1E-12 49.6 5.5 64 2-67 24-99 (723)
138 2ojh_A Uncharacterized protein 98.7 5.2E-07 1.8E-11 41.9 7.6 65 2-66 136-202 (297)
139 2hqs_A Protein TOLB; TOLB, PAL 98.7 1.5E-06 5.1E-11 43.1 9.5 64 2-67 230-299 (415)
140 3o4h_A Acylamino-acid-releasin 98.6 3.2E-08 1.1E-12 50.4 3.6 63 2-66 202-274 (582)
141 1jmx_B Amine dehydrogenase; ox 98.6 3.7E-07 1.2E-11 43.5 6.9 62 2-67 262-324 (349)
142 2ecf_A Dipeptidyl peptidase IV 98.6 9.4E-07 3.2E-11 46.1 8.2 64 2-67 116-180 (741)
143 3u4y_A Uncharacterized protein 98.6 9.2E-07 3.1E-11 42.1 7.5 65 2-67 47-116 (331)
144 1ri6_A Putative isomerase YBHE 98.6 9.2E-07 3.2E-11 42.0 7.3 64 2-66 45-113 (343)
145 3vgz_A Uncharacterized protein 98.6 4.1E-06 1.4E-10 40.0 9.6 65 2-67 192-261 (353)
146 3vgz_A Uncharacterized protein 98.6 9.8E-07 3.4E-11 42.2 7.3 65 2-67 148-214 (353)
147 3pe7_A Oligogalacturonate lyas 98.5 6.3E-07 2.2E-11 43.4 6.3 65 2-67 43-110 (388)
148 2oiz_A Aromatic amine dehydrog 98.5 2E-06 6.7E-11 42.0 8.0 63 2-68 261-334 (361)
149 3hfq_A Uncharacterized protein 98.5 1.8E-06 6E-11 41.5 7.4 65 2-66 247-315 (347)
150 1ri6_A Putative isomerase YBHE 98.5 4.9E-06 1.7E-10 39.5 8.7 66 2-67 136-208 (343)
151 1z68_A Fibroblast activation p 98.5 3.7E-07 1.3E-11 47.5 5.2 64 2-67 23-98 (719)
152 3hfq_A Uncharacterized protein 98.5 3.2E-06 1.1E-10 40.6 7.8 66 2-67 93-170 (347)
153 1jmx_B Amine dehydrogenase; ox 98.5 4.5E-06 1.5E-10 39.8 8.3 65 2-67 7-73 (349)
154 1xfd_A DIP, dipeptidyl aminope 98.5 2.1E-06 7.1E-11 44.7 7.3 55 2-58 121-193 (723)
155 1pby_B Quinohemoprotein amine 98.4 4.2E-06 1.4E-10 39.7 7.4 62 2-67 89-162 (337)
156 3u4y_A Uncharacterized protein 98.4 8E-06 2.7E-10 38.9 8.4 63 3-67 6-70 (331)
157 2z3z_A Dipeptidyl aminopeptida 98.4 3.1E-06 1.1E-10 44.1 7.2 53 14-67 233-292 (706)
158 3scy_A Hypothetical bacterial 98.4 4.9E-06 1.7E-10 40.2 7.3 64 2-66 266-335 (361)
159 3scy_A Hypothetical bacterial 98.4 4.7E-06 1.6E-10 40.3 6.9 65 2-67 218-290 (361)
160 1z68_A Fibroblast activation p 98.3 4.1E-06 1.4E-10 43.7 6.2 55 2-58 117-189 (719)
161 1k32_A Tricorn protease; prote 98.3 1.1E-05 3.7E-10 44.0 7.8 61 5-67 347-408 (1045)
162 1jof_A Carboxy-CIS,CIS-muconat 98.3 2E-05 6.8E-10 38.4 7.9 66 2-67 90-175 (365)
163 1q7f_A NHL, brain tumor CG1071 98.3 2.3E-05 7.8E-10 36.8 7.7 63 2-67 214-279 (286)
164 2dg1_A DRP35, lactonase; beta 98.2 4.8E-05 1.7E-09 36.4 8.6 64 3-67 53-120 (333)
165 3e5z_A Putative gluconolactona 98.2 4.6E-05 1.6E-09 36.0 8.1 62 2-66 35-97 (296)
166 4a5s_A Dipeptidyl peptidase 4 98.2 5.5E-06 1.9E-10 43.7 5.4 63 2-67 69-140 (740)
167 3azo_A Aminopeptidase; POP fam 98.1 4.3E-05 1.5E-09 39.7 7.8 63 2-64 195-268 (662)
168 2z3z_A Dipeptidyl aminopeptida 98.1 8E-05 2.7E-09 39.0 8.4 65 2-66 317-389 (706)
169 4a5s_A Dipeptidyl peptidase 4 98.1 2.7E-05 9.1E-10 41.2 6.5 63 2-67 24-100 (740)
170 1jof_A Carboxy-CIS,CIS-muconat 98.1 7.6E-06 2.6E-10 39.8 4.1 65 2-66 262-339 (365)
171 2oiz_A Aromatic amine dehydrog 98.1 1.2E-05 4.2E-10 39.3 4.7 66 1-67 56-139 (361)
172 1xip_A Nucleoporin NUP159; bet 98.0 6.5E-05 2.2E-09 37.6 6.9 51 9-66 139-189 (388)
173 1xip_A Nucleoporin NUP159; bet 98.0 0.00013 4.4E-09 36.5 7.9 59 5-67 96-154 (388)
174 2xdw_A Prolyl endopeptidase; a 98.0 4.7E-05 1.6E-09 40.1 6.6 57 2-60 132-193 (710)
175 3c5m_A Oligogalacturonate lyas 98.0 4E-05 1.4E-09 37.2 5.9 64 2-67 43-110 (396)
176 3fvz_A Peptidyl-glycine alpha- 97.9 0.00024 8.3E-09 34.2 8.5 65 2-67 31-120 (329)
177 1qks_A Cytochrome CD1 nitrite 97.9 0.00026 8.9E-09 37.0 8.1 64 2-67 204-274 (567)
178 3azo_A Aminopeptidase; POP fam 97.9 3.9E-05 1.3E-09 39.8 5.1 66 2-67 137-225 (662)
179 3no2_A Uncharacterized protein 97.9 0.00018 6.3E-09 34.1 7.0 59 5-66 4-63 (276)
180 2bkl_A Prolyl endopeptidase; m 97.9 2.9E-05 9.9E-10 40.8 4.6 63 2-67 128-210 (695)
181 1q7f_A NHL, brain tumor CG1071 97.9 0.00022 7.4E-09 33.5 7.0 64 2-67 128-193 (286)
182 1rwi_B Serine/threonine-protei 97.9 0.00028 9.5E-09 32.7 7.4 64 3-67 200-263 (270)
183 2gop_A Trilobed protease; beta 97.8 0.00017 5.8E-09 34.6 6.5 52 2-56 66-122 (347)
184 1qks_A Cytochrome CD1 nitrite 97.6 0.0015 5.3E-08 34.2 8.7 60 6-67 167-226 (567)
185 3fvz_A Peptidyl-glycine alpha- 97.6 0.0011 3.8E-08 32.0 8.6 65 2-66 98-173 (329)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 97.6 0.0011 3.8E-08 31.3 8.8 64 3-67 234-298 (314)
187 2xdw_A Prolyl endopeptidase; a 97.6 0.0015 5.2E-08 34.6 7.8 65 2-66 178-266 (710)
188 2mad_H Methylamine dehydrogena 97.5 0.0017 5.8E-08 32.2 8.5 64 1-65 72-154 (373)
189 2bkl_A Prolyl endopeptidase; m 97.5 0.0021 7.3E-08 34.1 7.7 64 2-65 175-258 (695)
190 3e5z_A Putative gluconolactona 97.5 0.0017 5.7E-08 30.7 7.0 64 2-67 179-245 (296)
191 1rwi_B Serine/threonine-protei 97.5 0.0015 5.2E-08 30.2 7.6 64 3-67 158-221 (270)
192 3sjl_D Methylamine dehydrogena 97.4 0.00042 1.4E-08 34.8 4.6 66 2-68 85-169 (386)
193 2hz6_A Endoplasmic reticulum t 97.4 0.00039 1.3E-08 34.3 4.4 60 5-67 8-67 (369)
194 2mad_H Methylamine dehydrogena 97.4 0.0028 9.7E-08 31.5 8.7 64 3-68 275-350 (373)
195 3sjl_D Methylamine dehydrogena 97.3 0.0024 8.3E-08 32.2 6.6 63 2-67 40-117 (386)
196 3dsm_A Uncharacterized protein 97.2 0.0044 1.5E-07 30.0 7.8 61 5-67 53-113 (328)
197 3pe7_A Oligogalacturonate lyas 97.1 0.0057 1.9E-07 29.8 9.1 52 2-54 88-141 (388)
198 3c5m_A Oligogalacturonate lyas 97.1 0.0044 1.5E-07 30.2 5.9 62 2-67 245-328 (396)
199 2gop_A Trilobed protease; beta 97.0 0.0065 2.2E-07 29.2 6.0 57 3-64 223-288 (347)
200 1mda_H Methylamine dehydrogena 97.0 0.00044 1.5E-08 34.4 1.9 64 2-66 72-156 (368)
201 1mda_H Methylamine dehydrogena 96.9 0.01 3.4E-07 29.7 6.8 65 2-68 271-346 (368)
202 3c75_H MADH, methylamine dehyd 96.9 0.01 3.5E-07 30.3 6.6 65 2-68 326-402 (426)
203 1yr2_A Prolyl oligopeptidase; 96.9 0.0033 1.1E-07 33.6 4.8 55 2-59 170-229 (741)
204 2dg1_A DRP35, lactonase; beta 96.8 0.0016 5.5E-08 31.2 3.0 59 5-67 16-74 (333)
205 3no2_A Uncharacterized protein 96.7 0.012 4.3E-07 28.0 7.6 62 3-67 133-194 (276)
206 2z2n_A Virginiamycin B lyase; 96.7 0.013 4.3E-07 27.4 7.9 63 3-66 23-85 (299)
207 3dsm_A Uncharacterized protein 96.7 0.015 5.3E-07 28.1 8.1 63 2-67 179-252 (328)
208 3g4e_A Regucalcin; six bladed 96.6 0.015 5.2E-07 27.7 6.1 66 2-67 156-228 (297)
209 3dr2_A Exported gluconolactona 96.4 0.024 8.3E-07 27.1 8.2 62 2-66 52-114 (305)
210 2z2n_A Virginiamycin B lyase; 96.3 0.026 8.9E-07 26.4 8.1 63 3-66 191-253 (299)
211 1yr2_A Prolyl oligopeptidase; 96.3 0.048 1.6E-06 29.4 7.5 64 2-66 216-301 (741)
212 3iuj_A Prolyl endopeptidase; h 96.2 0.01 3.5E-07 31.7 3.9 53 2-58 136-194 (693)
213 2qc5_A Streptogramin B lactona 96.1 0.037 1.3E-06 25.9 7.9 62 4-66 29-90 (300)
214 1fwx_A Nitrous oxide reductase 96.0 0.069 2.3E-06 28.8 6.7 65 2-66 284-359 (595)
215 3hrp_A Uncharacterized protein 96.0 0.052 1.8E-06 27.4 7.1 61 2-65 138-200 (409)
216 1pjx_A Dfpase, DIISOPROPYLFLUO 95.9 0.047 1.6E-06 25.8 6.9 64 4-67 185-255 (314)
217 3c75_H MADH, methylamine dehyd 95.7 0.082 2.8E-06 27.2 7.0 61 4-67 82-157 (426)
218 2qc5_A Streptogramin B lactona 95.5 0.066 2.3E-06 25.0 8.0 62 4-66 71-132 (300)
219 2qe8_A Uncharacterized protein 95.0 0.042 1.4E-06 26.8 3.4 28 39-66 249-276 (343)
220 3hrp_A Uncharacterized protein 94.8 0.17 5.7E-06 25.6 7.5 63 2-66 330-408 (409)
221 1yiq_A Quinohemoprotein alcoho 94.8 0.18 6.2E-06 27.4 5.6 51 16-68 455-505 (689)
222 1kb0_A Quinohemoprotein alcoho 94.8 0.13 4.6E-06 27.8 5.1 51 16-68 457-507 (677)
223 3pbp_A Nucleoporin NUP82; beta 94.4 0.25 8.6E-06 25.9 8.3 65 2-67 73-157 (452)
224 2hz6_A Endoplasmic reticulum t 94.1 0.0049 1.7E-07 30.5 -0.9 57 6-67 92-148 (369)
225 3g4e_A Regucalcin; six bladed 94.1 0.21 7.3E-06 23.8 7.1 53 3-56 207-261 (297)
226 2qe8_A Uncharacterized protein 93.8 0.28 9.5E-06 24.0 5.4 55 2-57 255-310 (343)
227 1k3i_A Galactose oxidase precu 92.8 0.61 2.1E-05 25.1 5.9 64 4-67 252-322 (656)
228 4gq2_M Nucleoporin NUP120; bet 92.5 0.51 1.8E-05 26.9 5.0 30 39-68 237-266 (950)
229 2ece_A 462AA long hypothetical 91.8 0.8 2.7E-05 24.2 6.2 55 2-56 328-399 (462)
230 2iwa_A Glutamine cyclotransfer 91.7 0.59 2E-05 22.6 7.5 64 2-67 112-180 (266)
231 3tc9_A Hypothetical hydrolase; 91.6 0.74 2.5E-05 23.6 7.5 61 5-66 237-299 (430)
232 1k3i_A Galactose oxidase precu 91.6 0.9 3.1E-05 24.5 5.8 63 5-67 197-273 (656)
233 2ghs_A AGR_C_1268P; regucalcin 91.6 0.63 2.1E-05 22.6 8.7 64 2-66 186-258 (326)
234 3dr2_A Exported gluconolactona 91.4 0.63 2.1E-05 22.3 6.7 29 38-66 188-222 (305)
235 3sbq_A Nitrous-oxide reductase 90.0 1.5 5.1E-05 24.2 7.0 65 2-66 330-406 (638)
236 2iwa_A Glutamine cyclotransfer 89.0 1.2 4E-05 21.6 5.1 58 7-67 77-134 (266)
237 4fhn_B Nucleoporin NUP120; pro 88.3 0.58 2E-05 27.1 3.0 27 42-68 242-268 (1139)
238 1yiq_A Quinohemoprotein alcoho 88.0 2.1 7.3E-05 23.5 6.1 49 3-52 483-532 (689)
239 3iuj_A Prolyl endopeptidase; h 85.5 3 0.0001 22.7 9.7 63 5-67 184-267 (693)
240 2ad6_A Methanol dehydrogenase 85.3 2.9 0.0001 22.4 4.8 20 48-67 474-493 (571)
241 3nol_A Glutamine cyclotransfer 84.6 2.4 8.1E-05 20.7 7.3 64 2-67 132-200 (262)
242 3mbr_X Glutamine cyclotransfer 84.5 2.3 7.8E-05 20.5 6.6 57 7-67 76-132 (243)
243 3f7f_A Nucleoporin NUP120; nuc 84.4 3.9 0.00013 23.1 4.7 21 48-68 230-250 (729)
244 2ghs_A AGR_C_1268P; regucalcin 84.2 2.5 8.4E-05 20.6 7.6 52 4-57 239-292 (326)
245 3nok_A Glutaminyl cyclase; bet 81.8 3.3 0.00011 20.3 7.9 64 2-67 141-209 (268)
246 4fhn_B Nucleoporin NUP120; pro 79.3 4.4 0.00015 23.8 3.9 22 4-25 247-268 (1139)
247 4gq2_M Nucleoporin NUP120; bet 78.6 5 0.00017 23.2 4.0 22 4-25 245-266 (950)
248 4hw6_A Hypothetical protein, I 77.4 5.8 0.0002 20.5 7.2 26 41-66 276-302 (433)
249 1kb0_A Quinohemoprotein alcoho 77.2 7.2 0.00024 21.5 6.7 49 3-52 485-534 (677)
250 2p4o_A Hypothetical protein; p 76.9 4.8 0.00016 19.4 8.6 52 3-57 40-91 (306)
251 3f7f_A Nucleoporin NUP120; nuc 76.6 8.3 0.00028 22.0 4.3 22 4-25 229-250 (729)
252 1npe_A Nidogen, entactin; glyc 75.8 4.8 0.00017 18.8 8.8 65 2-67 129-197 (267)
253 3mbr_X Glutamine cyclotransfer 74.6 5.8 0.0002 19.1 7.5 63 3-67 111-178 (243)
254 3nol_A Glutamine cyclotransfer 73.2 6.6 0.00023 19.2 7.5 62 4-67 51-115 (262)
255 3nok_A Glutaminyl cyclase; bet 70.7 7.9 0.00027 19.1 8.7 62 4-67 63-124 (268)
256 2ece_A 462AA long hypothetical 68.8 11 0.00039 20.2 6.6 63 4-67 93-172 (462)
257 3q7m_A Lipoprotein YFGL, BAMB; 68.1 9.3 0.00032 18.8 8.1 61 5-67 52-121 (376)
258 3kya_A Putative phosphatase; s 64.6 15 0.0005 19.9 6.6 27 39-65 311-338 (496)
259 2fp8_A Strictosidine synthase; 63.7 11 0.00038 18.2 6.2 28 40-67 187-215 (322)
260 1tl2_A L10, protein (tachylect 58.9 15 0.0005 17.9 3.4 24 41-66 91-114 (236)
261 2xe4_A Oligopeptidase B; hydro 56.2 25 0.00085 19.8 8.5 65 2-66 228-302 (751)
262 2xzh_A Clathrin heavy chain 1; 55.5 21 0.00071 18.7 8.6 56 6-62 271-326 (365)
263 3hxj_A Pyrrolo-quinoline quino 53.5 18 0.00061 17.3 7.1 57 7-66 266-322 (330)
264 2p9w_A MAL S 1 allergenic prot 52.6 22 0.00077 18.2 7.8 28 40-67 187-214 (334)
265 1flg_A Protein (quinoprotein e 50.8 29 0.00099 19.0 6.1 47 5-52 496-543 (582)
266 1n7d_A LDL receptor, low-densi 48.2 35 0.0012 19.2 4.8 27 40-66 542-569 (699)
267 1bpo_A Protein (clathrin); cla 46.0 36 0.0012 18.7 9.4 58 5-63 269-326 (494)
268 3pbp_A Nucleoporin NUP82; beta 44.0 38 0.0013 18.3 8.0 45 5-49 138-191 (452)
269 1kv9_A Type II quinohemoprotei 43.3 42 0.0014 18.7 7.3 17 51-67 316-332 (668)
270 3ei3_A DNA damage-binding prot 41.8 58 0.002 19.9 8.3 62 5-67 522-590 (1158)
271 3sre_A PON1, serum paraoxonase 38.4 42 0.0014 17.2 7.0 30 38-67 221-251 (355)
272 2ism_A Putative oxidoreductase 36.3 43 0.0015 16.8 6.3 45 2-48 38-85 (352)
273 2vpj_A Kelch-like protein 12; 28.2 56 0.0019 15.6 5.7 21 5-25 206-231 (301)
274 1xi4_A Clathrin heavy chain; a 27.8 1.3E+02 0.0045 19.7 5.9 21 5-25 269-289 (1630)
275 1ijq_A LDL receptor, low-densi 25.4 69 0.0024 15.7 8.7 29 38-66 164-193 (316)
276 2xn4_A Kelch-like protein 2; s 25.3 65 0.0022 15.4 6.3 63 4-67 203-275 (302)
277 3ii7_A Kelch-like protein 7; p 23.3 73 0.0025 15.2 6.4 22 4-25 54-79 (306)
278 1w6s_A Methanol dehydrogenase 22.6 1.1E+02 0.0038 17.1 6.1 29 5-34 483-511 (599)
279 3amr_A 3-phytase; beta-propell 22.5 95 0.0032 16.2 6.4 57 6-66 40-106 (355)
280 3sov_A LRP-6, low-density lipo 21.9 86 0.003 15.5 8.6 29 38-66 166-195 (318)
281 3qqz_A Putative uncharacterize 20.5 89 0.0031 15.2 7.9 61 3-65 35-97 (255)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.81 E-value=8.9e-19 Score=84.55 Aligned_cols=65 Identities=15% Similarity=0.237 Sum_probs=59.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++++|++|+.|+.|++|+..+ ..++..+ .+|...|.+++|+|+++++++++.|++|++|++.
T Consensus 277 ~Spdg~~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 277 VDMKGELAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred ECCCCCceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 678999999999999999999987 5566554 6899999999999999999999999999999975
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.70 E-value=5.6e-16 Score=73.24 Aligned_cols=65 Identities=14% Similarity=0.331 Sum_probs=59.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.+++|+.|+.+++|+..+ ......+.+|...+.+++++|++..+++++.|+++++||++
T Consensus 63 ~~~~~~~l~s~s~d~~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~ 127 (304)
T 2ynn_A 63 FIARKNWIIVGSDDFRIRVFNYNT-GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (304)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGG
T ss_pred EeCCCCEEEEECCCCEEEEEECCC-CcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECC
Confidence 567899999999999999999987 56677888999999999999999999999999999999964
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.70 E-value=1.3e-15 Score=72.62 Aligned_cols=65 Identities=32% Similarity=0.636 Sum_probs=59.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+... ......+.+|...+..++|+|++..+++++.|+.+++||++
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 578899999999999999999987 56677788899999999999999999999999999999975
No 4
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.70 E-value=1.1e-15 Score=73.62 Aligned_cols=65 Identities=22% Similarity=0.354 Sum_probs=58.4
Q ss_pred eeecCcEEEEeeCCCC-EEEeecCCCCcceEEec-c-CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTT-IALWDARNLKTRVRTLQ-G-HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+. +++|+..+ ......+. + |...+.+++|+|++..+++++.|+++++||++
T Consensus 203 ~s~~g~~l~s~s~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 203 LNRKSDMVATCSQDGTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp ECTTSSEEEEEETTCSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 5789999999999998 99999987 56666666 4 88999999999999999999999999999975
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.69 E-value=1.4e-15 Score=72.48 Aligned_cols=65 Identities=25% Similarity=0.454 Sum_probs=59.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.|+.+++|++.. ..+...+..|...+..++|+|++..+++++.|+.+++||+.
T Consensus 256 ~sp~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 256 FCPDDTHFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCC-CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 578899999999999999999987 66777888899999999999999999999999999999974
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.68 E-value=2.2e-15 Score=72.52 Aligned_cols=65 Identities=18% Similarity=0.379 Sum_probs=59.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|++.+ ......+.+|...|.+++|++++ ..+++++.|+++++||++
T Consensus 135 ~spdg~~l~sgs~d~~i~iwd~~~-~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~ 200 (344)
T 4gqb_B 135 VLSSGTQAVSGSKDICIKVWDLAQ-QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR 200 (344)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEeCCCeEEEEECCC-CcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccc
Confidence 578999999999999999999987 67788889999999999999976 678999999999999976
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.68 E-value=2.6e-15 Score=71.86 Aligned_cols=65 Identities=28% Similarity=0.446 Sum_probs=59.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|+... ......+.+|...+.+++|+|++..+++++.|+.+++||++
T Consensus 192 ~~~~~~~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 192 LAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 567889999999999999999987 56677888899999999999999999999999999999976
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.68 E-value=2.2e-15 Score=71.62 Aligned_cols=65 Identities=23% Similarity=0.437 Sum_probs=59.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.+++++.|+.+++|++.+ ......+.+|...+.+++++|++..+++++.|+++++||++
T Consensus 73 ~s~dg~~l~s~s~D~~v~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 73 LTADGAYALSASWDKTLRLWDVAT-GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC-CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 567899999999999999999987 56677888999999999999999999999999999999975
No 9
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.67 E-value=3.1e-15 Score=71.59 Aligned_cols=65 Identities=28% Similarity=0.477 Sum_probs=59.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.|+.+++|++.+ ......+.+|...+.+++|+|+++.+++++.|+.+++||+.
T Consensus 84 ~~~~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 84 LSQENCFAISSSWDKTLRLWDLRT-GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp ECSSTTEEEEEETTSEEEEEETTS-SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred ECCCCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 567889999999999999999987 56677788999999999999999999999999999999974
No 10
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.67 E-value=2.6e-15 Score=70.61 Aligned_cols=65 Identities=15% Similarity=0.307 Sum_probs=55.5
Q ss_pred eeecCcEEEE--eeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFAT--CSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++..+++ ++.|+.+++|+..+ ..++..+.+|...|.+++|+|+++.+++++.|++|++||+.
T Consensus 248 ~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 248 WSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ecccccceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 3455655554 44789999999987 67788899999999999999999999999999999999975
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.67 E-value=3e-15 Score=72.77 Aligned_cols=66 Identities=27% Similarity=0.517 Sum_probs=59.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++|+++.+++|+.|+.+++|++.. ......+.+|...+.+++|+|++..+++++.|+.+++||+++
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIEN-RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 567899999999999999999987 566777889999999999999999999999999999999763
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.67 E-value=2.1e-15 Score=73.71 Aligned_cols=65 Identities=32% Similarity=0.551 Sum_probs=59.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++|+.|+.+++|+..+ ......+.+|...|.+++|+|++..+++++.|+++++||+.
T Consensus 116 ~~p~~~~l~s~s~Dg~i~vwd~~~-~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 116 FHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp ECSSSSEEEEEESSSCEEEEETTT-CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC-CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 567889999999999999999987 56677888999999999999999999999999999999975
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.67 E-value=1.5e-15 Score=76.07 Aligned_cols=65 Identities=31% Similarity=0.513 Sum_probs=58.6
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++|+++.+++++.|+.+++|+.. ......+.+|...|.+++|+|+++.+++++.|+.+++||..
T Consensus 23 a~spdg~~las~~~d~~v~iWd~~--~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~ 87 (577)
T 2ymu_A 23 AFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 87 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTT--SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EECCCCCEEEEEeCCCEEEEEECC--CCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 368999999999999999999963 46677888999999999999999999999999999999964
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.66 E-value=4.8e-15 Score=70.07 Aligned_cols=62 Identities=32% Similarity=0.550 Sum_probs=57.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++..+++++.|+.+++|+++. ......+.+|...+..++|+|++..+++++.|+++++||.+
T Consensus 197 ~~~~l~s~s~D~~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 197 DKPYMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp TCCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEcCCCeEEEEeCCC-CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 667999999999999999987 66777888999999999999999999999999999999975
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.66 E-value=4e-15 Score=72.10 Aligned_cols=63 Identities=30% Similarity=0.494 Sum_probs=57.3
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.+++|+.|+.+++|+++........+.+|...|.+++|+|++..+++++.|+++++||++
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 678999999999999999975456677888999999999999999999999999999999986
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.65 E-value=3.5e-15 Score=71.40 Aligned_cols=63 Identities=24% Similarity=0.428 Sum_probs=57.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
++|+++.+++|+.|+.+++|+... ......+.+|...|.+++|+|++..+++++.|+.+++||
T Consensus 278 ~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 278 FSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCCEEEEECCCCeEEEEEccc-CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 578899999999999999999977 556777889999999999999999999999999999997
No 17
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.64 E-value=1.9e-15 Score=73.90 Aligned_cols=65 Identities=26% Similarity=0.637 Sum_probs=57.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.|+.+++|+... ......+.+|...|.+++|+|++..+++++.|+.+++|+++
T Consensus 346 ~~~~g~~l~s~s~D~~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 346 FHSGGKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECSSSSCEEEEETTTEEEEECCTT-SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 567889999999999999999977 56677888999999999999999999999999999999974
No 18
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.64 E-value=7.1e-15 Score=69.30 Aligned_cols=66 Identities=24% Similarity=0.498 Sum_probs=57.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC-CcceEEeccCCCCEEEEEEcC--CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL-KTRVRTLQGHSNWVKNIEFSS--KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|+.... ......+.+|...|.+++|++ .+..+++++.|+++++||++
T Consensus 17 ~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 17 MDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp ECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred ECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 5789999999999999999998642 345677889999999999986 37899999999999999975
No 19
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.64 E-value=6.4e-15 Score=72.01 Aligned_cols=65 Identities=15% Similarity=0.321 Sum_probs=56.2
Q ss_pred eeecCcEEEEee--CCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCS--DDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.+++++ .|+.+++|+..+ ..++..+.+|...|.+++|+|++..+++++.|++|++||+.
T Consensus 328 ~~~~~~~lv~~sg~~d~~I~iwd~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 328 WSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ecCCCCeEEEEEecCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 456676666544 789999999987 67788899999999999999999999999999999999874
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.64 E-value=5.8e-15 Score=71.19 Aligned_cols=64 Identities=20% Similarity=0.318 Sum_probs=54.3
Q ss_pred eeecC-cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDT-RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++ ++|++++.|+.+++|+... ... ....+|...|.+++|+| ++..+++++.|++|++|++.
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~-~~~-~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADF-SEV-FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTS-CEE-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCC-CcE-eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 46766 6789999999999999976 333 34557999999999998 68899999999999999975
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.63 E-value=1.2e-14 Score=69.75 Aligned_cols=66 Identities=30% Similarity=0.501 Sum_probs=57.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.|++++.|+.+++|+..... .....+.+|...|.+++|+|+++.+++++.|+.+++||++
T Consensus 69 ~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 69 WSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred ECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 57899999999999999999987532 3456778899999999999999999999999999999874
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.63 E-value=1.9e-14 Score=69.33 Aligned_cols=62 Identities=16% Similarity=0.359 Sum_probs=56.8
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.+++|+.|+.+++|+++. ..+...+..|...+.+++|+|++..+++++.|+++++||++
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 568999999999999999987 56777888899999999999999999999999999999976
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.63 E-value=1.8e-14 Score=68.01 Aligned_cols=65 Identities=29% Similarity=0.504 Sum_probs=58.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+... ......+.+|...+..++|+|+++.+++++.|+.+++||++
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCC-cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 578899999999999999999977 55666778899999999999999999999999999999975
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.63 E-value=8.4e-15 Score=70.54 Aligned_cols=63 Identities=27% Similarity=0.513 Sum_probs=57.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
++|++..+++++.|+.+++|+... ......+.+|...|.+++|+|++..+++++.|+.+++|+
T Consensus 292 ~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDYTINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EeCCCCEEEEEECCCcEEEEECCC-CceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 567899999999999999999977 556777889999999999999999999999999999996
No 25
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.63 E-value=9e-15 Score=70.44 Aligned_cols=64 Identities=23% Similarity=0.306 Sum_probs=55.2
Q ss_pred ee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 3 FL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
+| +++++++|+.|+.|++|+++. ..++..+.+|...|.+++|+|++ +++++++.|+++++||.+
T Consensus 223 ~p~~~~~l~sg~~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGTVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp CSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred cCCCCcceEEeccCCcEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 45 457899999999999999987 66778888999999999999986 678999999999999975
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.63 E-value=2.3e-14 Score=67.68 Aligned_cols=65 Identities=35% Similarity=0.709 Sum_probs=59.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|++.. ......+.+|...+.++.|+|++..+++++.|+.+++||++
T Consensus 73 ~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 73 WSSDSNLLVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred EcCCCCEEEEECCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 567899999999999999999987 56677788899999999999999999999999999999976
No 27
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.7e-14 Score=69.06 Aligned_cols=66 Identities=15% Similarity=0.302 Sum_probs=56.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEecc-CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQG-HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++|++..+++|+.|+.+++|+++........+.. |...+.+++|+|++..+++++ ++.+++||+++
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~ 244 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK 244 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence 5788999999999999999999873333256776 899999999999999999998 55999999863
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.63 E-value=1.2e-14 Score=70.47 Aligned_cols=65 Identities=18% Similarity=0.354 Sum_probs=56.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEe----ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTL----QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|+... ....... .+|...|.+++|+|++..+++++.|+.+++|++.
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ECCCCCEEEEEECCCCEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 578899999999999999999876 3344444 5688899999999999999999999999999975
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.62 E-value=1.5e-14 Score=73.54 Aligned_cols=65 Identities=25% Similarity=0.425 Sum_probs=57.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec-------cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ-------GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+... ......+. +|...|..++|+|+++.+++++.|+++++||++
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~ 269 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 269 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ECCCCCEEEEEECCCcEEEEECCC-CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 678999999999999999999876 44444442 688999999999999999999999999999975
No 30
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.62 E-value=2.1e-14 Score=69.73 Aligned_cols=65 Identities=25% Similarity=0.547 Sum_probs=59.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|++.. ......+.+|...+.+++|+|++..+++++.|+.+++||++
T Consensus 147 ~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 147 FFPSGEALISSSQDMQLKIWSVKD-GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCC-CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 567889999999999999999987 55667788899999999999999999999999999999976
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.1e-14 Score=68.43 Aligned_cols=65 Identities=28% Similarity=0.483 Sum_probs=59.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+... ......+..|...+.+++|+|++..+++++.|+.+.+||+.
T Consensus 40 ~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 40 YNKEGDLLFSCSKDSSASVWYSLN-GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp ECTTSCEEEEEESSSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred EcCCCCEEEEEeCCCEEEEEeCCC-chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 578899999999999999999987 56677888899999999999999999999999999999975
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2e-14 Score=68.63 Aligned_cols=65 Identities=26% Similarity=0.492 Sum_probs=56.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC---cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK---TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++|+++.|++++.|+.+++|+..... .....+.+|...+.+++|+|++..+++++.|+++++|+.
T Consensus 115 ~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 115 WSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp ECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 57889999999999999999995311 345567789999999999999999999999999999985
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.61 E-value=3.2e-14 Score=67.94 Aligned_cols=66 Identities=26% Similarity=0.462 Sum_probs=52.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC------CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL------KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+.... ......+.+|...|.+++|+|+++.+++++.|+.+++||++
T Consensus 66 ~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 66 WRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp ECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred ECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 5788999999999999999998531 23455677899999999999999999999999999999973
No 34
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.61 E-value=9.7e-15 Score=70.82 Aligned_cols=60 Identities=23% Similarity=0.294 Sum_probs=50.7
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEE-EEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVK-NIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..+++++.|+.|++||+.+ +.....+.+|...+. .++|+|+++.+++++.|++|++||+.
T Consensus 296 ~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 296 HCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 3689999999999999988 677778888877654 58999999999999999999999963
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.60 E-value=9.2e-15 Score=73.25 Aligned_cols=62 Identities=31% Similarity=0.543 Sum_probs=56.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
++|+++++++++.|+.+++|+.. ......+.+|...|..++|+|+++.+++++.|+.+++||
T Consensus 516 ~s~dg~~l~s~~~dg~v~lwd~~--~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 516 FSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTT--SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEECcCEEEEEeCC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 67899999999999999999964 456777889999999999999999999999999999997
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.60 E-value=1.4e-14 Score=68.83 Aligned_cols=66 Identities=24% Similarity=0.463 Sum_probs=56.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcC--CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSS--KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.|++|+.|+.+++|++.... .....+.+|...|.+++|++ ++..+++++.|+++++||++
T Consensus 21 ~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 21 MDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred EcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 56889999999999999999997622 23556788999999999975 37899999999999999975
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.60 E-value=2.6e-14 Score=73.35 Aligned_cols=65 Identities=26% Similarity=0.390 Sum_probs=59.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|++.. ......+.+|...|.+++|+|++..+++++.|+++++||..
T Consensus 438 ~s~~g~~l~sgs~Dg~v~vwd~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 438 LSSDGQFALSGSWDGELRLWDLAA-GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ECCCCCEEEEEeCCCcEEEEECCC-CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 578899999999999999999987 56677788999999999999999999999999999999863
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.59 E-value=1.9e-14 Score=70.68 Aligned_cols=66 Identities=15% Similarity=0.221 Sum_probs=54.3
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
++| +++.+++|+.||.|++|++.... .......+|...|.+++|+| ++..+++++.|+++++||++
T Consensus 127 ~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 127 WHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred EeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 455 56789999999999999987632 23334567999999999998 57899999999999999975
No 39
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.59 E-value=2.7e-14 Score=68.50 Aligned_cols=66 Identities=24% Similarity=0.437 Sum_probs=55.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcc--eEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTR--VRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.|++|+.|+.+++|+....... .....+|...|.+++|+|+++.+++++.|+.+++|+..
T Consensus 24 ~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 24 WNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp ECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 6789999999999999999998762211 12235788999999999999999999999999999864
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.58 E-value=5.1e-14 Score=68.39 Aligned_cols=65 Identities=17% Similarity=0.290 Sum_probs=57.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.+++++.|+.+++|+... ......+..|...+.+++|+|++..+++++.|+.+++||++
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 169 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNF-NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK 169 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTS-CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EecCCCEEEEEECCCCEEEEeCCC-cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 467889999999999999999976 55555667899999999999999999999999999999975
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.57 E-value=1.3e-13 Score=70.19 Aligned_cols=65 Identities=20% Similarity=0.343 Sum_probs=57.4
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++. .+++++.|+.+++|+... ......+.+|...|.+++|+|+++.+++++.|+++++||..
T Consensus 155 f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 155 FKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp ECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ECCCCCeEEEEEeCCCeEEEEECCC-CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 567765 699999999999999876 55666788999999999999999999999999999999964
No 42
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.57 E-value=1.2e-13 Score=65.68 Aligned_cols=62 Identities=21% Similarity=0.480 Sum_probs=55.1
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++..+++++.|+.+++|++.. ......+.+|...+..++++|++..+++++.|+.+++||+.
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred CccEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 455899999999999999987 55666778899999999999999999999999999999975
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.57 E-value=8.4e-14 Score=67.19 Aligned_cols=65 Identities=23% Similarity=0.493 Sum_probs=58.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+... ......+.+|...+.+++|++++ ..+++++.|+.+++||++
T Consensus 147 ~spdg~~l~sgs~dg~v~iwd~~~-~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 147 VFSDGTQAVSGGKDFSVKVWDLSQ-KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT
T ss_pred ECCCCCEEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC
Confidence 578999999999999999999987 66777888999999999999976 578899999999999975
No 44
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.57 E-value=1.5e-13 Score=65.84 Aligned_cols=63 Identities=22% Similarity=0.564 Sum_probs=55.0
Q ss_pred cCcEEEEeeCCCCEEEeecCCC------CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNL------KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.+++|+.|+.+++|+.... ..+...+.+|...|.+++|+|++..+++++.|+++++||++
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~ 106 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR 106 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 7889999999999999998642 13455678899999999999999999999999999999975
No 45
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.57 E-value=2.9e-14 Score=69.45 Aligned_cols=62 Identities=21% Similarity=0.344 Sum_probs=54.4
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
+++.|++++.|+.+++|++.. ..+......|...+.+++|+|++ ..+++++.|+++++||++
T Consensus 155 d~~~las~s~D~tv~~Wd~~~-~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTD-EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEET-TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEECCCeEEEEECCC-CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 788999999999999999976 45566677788899999999976 589999999999999975
No 46
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.57 E-value=1.1e-13 Score=65.30 Aligned_cols=66 Identities=20% Similarity=0.389 Sum_probs=56.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC---cceEEeccCCCCEEEEEEcC--CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK---TRVRTLQGHSNWVKNIEFSS--KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|++.... .....+.+|...+.+++|+| ++..+++++.|+.+++||++
T Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~ 89 (351)
T 3f3f_A 19 YDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEED 89 (351)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEC
T ss_pred EcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecC
Confidence 56889999999999999999997522 24555678999999999999 58999999999999999975
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.56 E-value=1.5e-13 Score=66.79 Aligned_cols=67 Identities=30% Similarity=0.553 Sum_probs=58.0
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCC------cceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLK------TRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 68 (68)
++| +++.+++++.|+.+++|++.... .+...+.+|...+.+++|+|++ ..+++++.|+.+.+||+++
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT 163 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC
Confidence 456 78999999999999999997632 4567788899999999999987 7999999999999999763
No 48
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.56 E-value=1e-13 Score=66.08 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=56.7
Q ss_pred eeec---CcEEEEeeCCCCEEEeecCCC-CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLD---TRVFATCSDDTTIALWDARNL-KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~---~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+ ++.+++++.|+.+++|++... ......+..|...+.+++|+|++..+++++.|+.+.+||++
T Consensus 47 ~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 47 FSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp ECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 4566 589999999999999999862 33336677899999999999999999999999999999975
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.56 E-value=2.6e-13 Score=64.67 Aligned_cols=66 Identities=24% Similarity=0.516 Sum_probs=57.6
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEe---ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTL---QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++| +++.+++++.|+.+++|++.. ......+ ..|...+.+++|+|++..+++++.|+.+++||+++
T Consensus 123 ~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 123 FHPRDPNLLLSVSKDHALRLWNIQT-DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTT-TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred ECCCCCCEEEEEeCCCeEEEEEeec-CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 456 789999999999999999987 4555555 57889999999999999999999999999999863
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.56 E-value=2.1e-13 Score=65.01 Aligned_cols=65 Identities=20% Similarity=0.396 Sum_probs=57.4
Q ss_pred eeec----CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLD----TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+ +..+++++.|+.+++|+... ......+..|...+.+++|+| ++..+++++.|+.+++||++
T Consensus 77 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 77 WTYDSNTSHPLLAVAGSRGIIRIINPIT-MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp EEECTTTCCEEEEEEETTCEEEEECTTT-CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eccCCCCCCCEEEEecCCCEEEEEEchh-ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 4555 57899999999999999987 566777888999999999999 88999999999999999976
No 51
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.56 E-value=5.2e-14 Score=74.35 Aligned_cols=66 Identities=14% Similarity=0.084 Sum_probs=56.6
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCC--------------------------------------------cceEEeccC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLK--------------------------------------------TRVRTLQGH 36 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~--------------------------------------------~~~~~~~~~ 36 (68)
+++|+++.+++|+.|+.|++|++.... .+...+.+|
T Consensus 495 afspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h 574 (902)
T 2oaj_A 495 SFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHAN 574 (902)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCC
T ss_pred EecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcC
Confidence 378999999999999999999986421 124566779
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 37 SNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
...|.+++++|++ .+++++.|+++++||++
T Consensus 575 ~~~V~svafSpdG-~lAsgs~D~tv~lwd~~ 604 (902)
T 2oaj_A 575 KGKTSAINNSNIG-FVGIAYAAGSLMLIDRR 604 (902)
T ss_dssp SCSEEEEEECBTS-EEEEEETTSEEEEEETT
T ss_pred CCcEEEEEecCCc-EEEEEeCCCcEEEEECC
Confidence 9999999999999 99999999999999975
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.55 E-value=1.3e-13 Score=73.89 Aligned_cols=65 Identities=25% Similarity=0.443 Sum_probs=59.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|+..+ ......+.+|...|.+++|+|++..+++++.|+.+.+||..
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAET-GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ECCCCCEEEEEeCCCeEEEEECCC-CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 678999999999999999999987 56677888999999999999999999999999999999975
No 53
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.55 E-value=8.1e-14 Score=65.77 Aligned_cols=66 Identities=18% Similarity=0.291 Sum_probs=55.4
Q ss_pred eeecC----cEEEEeeCCCCEEEeecCCC---------------------------------------------CcceEE
Q psy11876 2 IFLDT----RVFATCSDDTTIALWDARNL---------------------------------------------KTRVRT 32 (68)
Q Consensus 2 ~~~~~----~~~~~~~~~~~v~~~~~~~~---------------------------------------------~~~~~~ 32 (68)
++|++ +.+++++.|+.+++|++... ......
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 45666 79999999999999998641 034455
Q ss_pred eccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 33 LQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+|...+.+++|+|+++.+++++.|+.+++|++.
T Consensus 302 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 302 HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EecccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 67788999999999999999999999999999975
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.55 E-value=2.5e-13 Score=64.39 Aligned_cols=66 Identities=26% Similarity=0.553 Sum_probs=56.1
Q ss_pred eeec-CcEEEEeeCCCCEEEeecCCCC----cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLD-TRVFATCSDDTTIALWDARNLK----TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~-~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+ +++|++|+.|+.|++|++.... .+...+.+|...|.+++|+|+++.+++++.|+.+.+|+..
T Consensus 46 ~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 46 TTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp ECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence 4666 5799999999999999986522 2455677899999999999999999999999999999864
No 55
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.55 E-value=2.5e-13 Score=66.45 Aligned_cols=63 Identities=17% Similarity=0.347 Sum_probs=56.5
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEecc--CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQG--HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++..+++++.|+.+++|+++. ......+.. |...+.+++|+|++..+++++.|+.+++||++
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRT-LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTT-CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEeCCCeEEEEeCCC-CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 5688999999999999999987 566666766 78899999999999999999999999999986
No 56
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.55 E-value=1.9e-13 Score=66.45 Aligned_cols=66 Identities=21% Similarity=0.320 Sum_probs=57.8
Q ss_pred eeecC-cEEEEeeCCCCEEEeecCCCCcceEEe--ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDT-RVFATCSDDTTIALWDARNLKTRVRTL--QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++|++ +.+++++.|+.+++|++.. ......+ ..|...+.+++|+|++..+++++.|+.+++||+++
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGT-GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTT-TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCC-CCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 45676 6999999999999999987 5666667 77899999999999999999999999999999763
No 57
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.55 E-value=2.2e-13 Score=66.29 Aligned_cols=65 Identities=25% Similarity=0.480 Sum_probs=54.5
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEe-------ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTL-------QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++| +++.+++++.|+.+++|+... ......+ .+|...+.+++|+|++..+++++.|+.+++||++
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EECCCCCEEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 456 788999999999999999976 3333333 4688899999999999999999999999999975
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.54 E-value=4e-13 Score=66.14 Aligned_cols=65 Identities=28% Similarity=0.494 Sum_probs=57.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.++++.+++|+.|+.+++|+..+ ......+.+|...|.+++|++++ .+++++.|+.+++||+++
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~~-~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSIN-KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred EEECCCEEEEEcCCCcEEEEECCC-CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 355788999999999999999987 66777888999999999999887 899999999999999763
No 59
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.54 E-value=2.7e-13 Score=64.93 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=53.5
Q ss_pred eee--cCcEEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL--DTRVFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++| +++.+++++.|+.+++|++.. ....... ..+...+.+++|+|++..+++++.|+.+++||+++
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYED-DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSS-SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCC-CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 356 788999999999999999987 4444444 33455789999999999999999999999999863
No 60
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.54 E-value=2.1e-13 Score=64.35 Aligned_cols=62 Identities=24% Similarity=0.545 Sum_probs=52.3
Q ss_pred CcEEEEeeCCCCEEEeecCCCCc---ceEEeccCCCCEEEEEEcCCC---CEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKT---RVRTLQGHSNWVKNIEFSSKD---NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~ 67 (68)
++.|++|+.|+.+++|+...... ....+.+|...|.+++|+|++ ..+++++.|+++++||++
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 56899999999999999875221 345677899999999999974 789999999999999864
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.54 E-value=1.4e-14 Score=69.63 Aligned_cols=66 Identities=20% Similarity=0.366 Sum_probs=55.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+..... .....+.+|...+.+++|+|+++.+++++.|+.+++||+.
T Consensus 19 ~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 19 FNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp ECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred ECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 57889999999999999999997622 4555677899999999999999999999999999999975
No 62
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.4e-13 Score=70.30 Aligned_cols=65 Identities=15% Similarity=0.263 Sum_probs=54.2
Q ss_pred CeeecCcEEEEeeCCCCEEEeecCCCCc------ceEEe----ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 1 MIFLDTRVFATCSDDTTIALWDARNLKT------RVRTL----QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++|+++.+++|+.||.+++|+...... ....+ .+|...|.+++|+|++ +++++.|+.+++|+..
T Consensus 136 afSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 136 EWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVS 210 (588)
T ss_dssp EECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCC
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECC
Confidence 3689999999999999999999986321 23454 5677899999999998 7888889999999975
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.53 E-value=7.2e-13 Score=65.23 Aligned_cols=65 Identities=20% Similarity=0.429 Sum_probs=58.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++++.+++++.|+.+++|++.. ..+...+.+|...+.+++++|++..+++++.|+.+++||++
T Consensus 276 ~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 276 VSGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 356788999999999999999987 66777788899999999999999999999999999999975
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1.1e-13 Score=66.22 Aligned_cols=66 Identities=24% Similarity=0.516 Sum_probs=56.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC-CcceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL-KTRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+.... ......+.+|...+.+++|++. +..+++++.|+.+++||+.
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 5788999999999999999998631 3445567789999999999876 8999999999999999864
No 65
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.52 E-value=3.9e-13 Score=67.63 Aligned_cols=65 Identities=15% Similarity=0.291 Sum_probs=58.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEecc-CCCCEEEEEEcC----------CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQG-HSNWVKNIEFSS----------KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+... ......+.+ |...+..++|+| ++..+++++.|+.+++|++.
T Consensus 496 ~s~~g~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 571 (615)
T 1pgu_A 496 ISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 571 (615)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred ECCCCCEEEEcCCCCeEEEeeCCC-CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence 578999999999999999999987 555556666 889999999999 99999999999999999975
No 66
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.52 E-value=5.8e-14 Score=70.87 Aligned_cols=65 Identities=12% Similarity=0.146 Sum_probs=57.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+.+. ......+.+|...|.+++|+|+++.+++++.|+++++|+..
T Consensus 363 fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 363 YCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred eCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 577888899999999999999987 45556677899999999999999999999999999999864
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.52 E-value=1.8e-13 Score=68.86 Aligned_cols=62 Identities=26% Similarity=0.471 Sum_probs=56.4
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.+++++.|+.+++|++.........+.+|...+..++|+|++. +++++.|+.+++|++.
T Consensus 552 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 552 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp SCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred CCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 8999999999999999999874366777888999999999999999 9999999999999975
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.52 E-value=5.3e-13 Score=68.63 Aligned_cols=64 Identities=28% Similarity=0.521 Sum_probs=56.7
Q ss_pred eecC--cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDT--RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+|++ ..+++++.|+.+++|++.. ......+.+|...+.+++|+|++..+++++.|+.+++||++
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred eCCCCcceEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 4554 5799999999999999987 56667788899999999999999999999999999999975
No 69
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.52 E-value=3.3e-13 Score=66.75 Aligned_cols=65 Identities=17% Similarity=0.208 Sum_probs=55.4
Q ss_pred eeec-CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLD-TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+ +..+++++.|+.+++|+++. .........|...+.+++|+|++..+++++.|+.+++||.+
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~-~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTE-TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESS-SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCC-CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 4565 78999999999999999987 34444455678889999999999999999999999999975
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.51 E-value=9.3e-13 Score=62.23 Aligned_cols=65 Identities=37% Similarity=0.696 Sum_probs=58.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.++.+.+|++.. ......+..|...+..++|+|++..+++++.++.+.+||++
T Consensus 149 ~~~~~~~l~~~~~dg~v~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 149 ISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCC-CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECC
Confidence 467889999999999999999987 56677778889999999999999999999999999999976
No 71
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.51 E-value=2.9e-13 Score=64.79 Aligned_cols=65 Identities=22% Similarity=0.525 Sum_probs=57.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCc--ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKT--RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.++.+++|+... .. ....+..|...+.+++|+|++..+++++.|+.+.+||+.
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSG-NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEET-TEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCC-CcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 568899999999999999999976 33 566777899999999999999999999999999999864
No 72
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.51 E-value=4.6e-13 Score=64.65 Aligned_cols=65 Identities=22% Similarity=0.288 Sum_probs=57.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec------cC---------------CCCEEEEEEcCCC----------C
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ------GH---------------SNWVKNIEFSSKD----------N 50 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~----------~ 50 (68)
++|+++.+++++.|+.+++|++.. ......+. .| ...+..++|+|++ .
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 377 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNE 377 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSC
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCC-CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccc
Confidence 567889999999999999999987 56666676 66 8899999999997 7
Q ss_pred EEEEEeCCCCEEEEeCC
Q psy11876 51 LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 51 ~~~~~~~~~~i~~~~~~ 67 (68)
.+++++.|+.+++|++.
T Consensus 378 ~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 378 SLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEEEETTTEEEEEEEE
T ss_pred eEEEecCCCcEEEEEcC
Confidence 99999999999999975
No 73
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.9e-13 Score=66.27 Aligned_cols=65 Identities=20% Similarity=0.477 Sum_probs=58.1
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
++| ++..+++++.|+.+++|++.. ..+...+..|...+..++|+|++ ..+++++.|+.+++|++.
T Consensus 270 ~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred eCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 456 789999999999999999987 56777788899999999999988 899999999999999975
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.50 E-value=3.6e-13 Score=69.68 Aligned_cols=65 Identities=17% Similarity=0.248 Sum_probs=59.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.++.+.+|+..+ ......+..|...+.+++|+|++..+++++.++.+.+|++.
T Consensus 21 ~sp~~~~la~~~~~g~v~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 21 FHPTEPWVLTTLYSGRVEIWNYET-QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC-CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 678999999999999999999987 56677788899999999999999999999999999999975
No 75
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.1e-12 Score=62.58 Aligned_cols=66 Identities=17% Similarity=0.248 Sum_probs=58.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.++.+.+|+..........+..|...+..++|+|++..+++++.++.+.+||++
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 467888999999999999999987445666778889999999999999999999999999999976
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.50 E-value=5.1e-13 Score=64.51 Aligned_cols=65 Identities=28% Similarity=0.589 Sum_probs=58.1
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEecc-------------CCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQG-------------HSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
++|+++.+++++.| +.+++|++.. ......+.. |...+..++|+|++..+++++.|+.+++||
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 56788999999999 9999999987 566667777 889999999999999999999999999999
Q ss_pred CC
Q psy11876 66 IN 67 (68)
Q Consensus 66 ~~ 67 (68)
++
T Consensus 320 ~~ 321 (397)
T 1sq9_A 320 VK 321 (397)
T ss_dssp TT
T ss_pred cC
Confidence 85
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.2e-12 Score=61.45 Aligned_cols=64 Identities=20% Similarity=0.296 Sum_probs=56.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++++.+++++.|+.+++|+... .........|...+.+++|+|++..+++++.++.+.+|++.
T Consensus 26 ~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 89 (313)
T 3odt_A 26 AVDDSKVASVSRDGTVRLWSKDD-QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLF 89 (313)
T ss_dssp EEETTEEEEEETTSEEEEEEESS-SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred ecCCCEEEEEEcCCcEEEEECCC-CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEee
Confidence 37888999999999999999976 55566677888999999999999999999999999999864
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.49 E-value=1.3e-13 Score=66.31 Aligned_cols=66 Identities=12% Similarity=0.121 Sum_probs=52.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|++.... .+......|...+.+++|+|++..+++++.|+.+++||++
T Consensus 63 ~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 130 (377)
T 3dwl_C 63 WAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFE 130 (377)
T ss_dssp ECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-
T ss_pred EeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEEC
Confidence 56788999999999999999997632 2456677899999999999999999999999999999975
No 79
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.49 E-value=9e-13 Score=63.63 Aligned_cols=64 Identities=19% Similarity=0.346 Sum_probs=57.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.|+.+++|++. ..+...+..|...+.+++|+|++. .+++++.|+.+++||++
T Consensus 171 ~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 171 VSVSRQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp EETTTTEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred ECCCCCEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 56788999999999999999994 456777888999999999999987 99999999999999975
No 80
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.49 E-value=3.4e-13 Score=68.90 Aligned_cols=62 Identities=13% Similarity=0.194 Sum_probs=52.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC-----CEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN-----WVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.|+.+++|+... ....+. |.. .+.+++|+|+++.+++++.|+++++|++.
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 689999999999999999999533 343444 444 49999999999999999999999999975
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.49 E-value=2e-12 Score=61.30 Aligned_cols=62 Identities=23% Similarity=0.544 Sum_probs=55.4
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
...+++++.|+.+++|+... ......+.+|...+.+++|+|+++.+++++.|+.+++||+++
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp SCEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CcEEEEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 45788999999999999987 566777888999999999999999999999999999999763
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.8e-12 Score=63.97 Aligned_cols=65 Identities=31% Similarity=0.462 Sum_probs=56.1
Q ss_pred eeec---CcEEEEeeCCCCEEEeecCCCCcceEE-eccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLD---TRVFATCSDDTTIALWDARNLKTRVRT-LQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++|+ ++.+++++.|+.+++|++.. ...... ..+|...+.+++|+ ++..+++++.|+.+++||+++
T Consensus 203 ~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 203 LIKDSDGHQFIITSDRDEHIKISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp EEECTTSCEEEEEEETTSCEEEEEESC-TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred EcCCCCCCcEEEEEcCCCcEEEEECCC-CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 5677 88999999999999999987 444444 55889999999999 999999999999999999763
No 83
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.48 E-value=2e-12 Score=60.79 Aligned_cols=61 Identities=18% Similarity=0.453 Sum_probs=49.5
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEe--ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTL--QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++.|++|. |+.|++|+..+ +.....+ ..|...|.+++|+|+++.+++++.|+.+++|++++
T Consensus 36 ~~~lAvg~-D~tV~iWd~~t-g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 36 GNVLAVAL-DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp TSEEEEEE-TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEe-CCEEEEEECCC-CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC
Confidence 34677664 89999999987 4444444 46777899999999999999999999999999763
No 84
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.48 E-value=8.4e-13 Score=62.78 Aligned_cols=61 Identities=21% Similarity=0.447 Sum_probs=50.2
Q ss_pred cEEEEeeCCCCEEEeecCCC---CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNL---KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
..+++++.|+.+++|+.... .........|...+..++|+|+++.+++++.|+.+++|+..
T Consensus 229 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 229 STIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 78999999999999998641 11223345678889999999999999999999999999853
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.48 E-value=5e-13 Score=65.33 Aligned_cols=66 Identities=15% Similarity=0.282 Sum_probs=55.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCc----------ceEEeccCC------------CCEEEEEEcCCC--CEEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKT----------RVRTLQGHS------------NWVKNIEFSSKD--NLLVTAGF 57 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~------------~~~~~~~~~~~~--~~~~~~~~ 57 (68)
++|+++.+++|+.|+.+++|+...... ....+.+|. ..|.+++|+|++ ..+++++.
T Consensus 36 ~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~ 115 (447)
T 3dw8_B 36 FNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTN 115 (447)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCC
Confidence 678999999999999999999875221 355677887 789999999987 78999999
Q ss_pred CCCEEEEeCC
Q psy11876 58 DGSIYTWDIN 67 (68)
Q Consensus 58 ~~~i~~~~~~ 67 (68)
|+.+++|++.
T Consensus 116 d~~i~iw~~~ 125 (447)
T 3dw8_B 116 DKTIKLWKIS 125 (447)
T ss_dssp SSCEEEEEEE
T ss_pred CCeEEEEecc
Confidence 9999999864
No 86
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.48 E-value=9.9e-14 Score=67.59 Aligned_cols=65 Identities=20% Similarity=0.399 Sum_probs=52.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCc----ceEEeccCCCCEEEEEEcC--------CCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKT----RVRTLQGHSNWVKNIEFSS--------KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+++..+++++.|+.+++|+...... ....+.+|...|..++|+| +++.+++++.|+++++||++
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 45667899999999999999876221 1223567999999999987 67899999999999999964
No 87
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.47 E-value=2.8e-12 Score=61.89 Aligned_cols=66 Identities=24% Similarity=0.347 Sum_probs=53.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC----------------------------------------------cceEEecc
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK----------------------------------------------TRVRTLQG 35 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~----------------------------------------------~~~~~~~~ 35 (68)
++|+++.+++++.|+.+++|++.... .+...+.+
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 332 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG 332 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC
T ss_pred EcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc
Confidence 45678888899999999999875411 23445567
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 36 HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
|...+.+++|+|++..+++++.|+.+++|++.
T Consensus 333 ~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 333 HYKTVDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 88899999999999999999999999999975
No 88
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.47 E-value=1e-12 Score=68.00 Aligned_cols=65 Identities=14% Similarity=0.331 Sum_probs=59.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+.+|+..+ ......+..|...+.+++|+|++..+++++.|+.+.+|++.
T Consensus 63 ~s~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 63 FIARKNWIIVGSDDFRIRVFNYNT-GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred EeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 578999999999999999999987 56677788899999999999999999999999999999864
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.47 E-value=4.5e-12 Score=61.76 Aligned_cols=64 Identities=28% Similarity=0.416 Sum_probs=55.3
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++..+++++.|+.+++|+..........+..|...+..++|+|++..+++++.|+.+++||+++
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 5678888999999999998754556667788999999999999999999999999999999763
No 90
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.47 E-value=2.3e-12 Score=61.17 Aligned_cols=66 Identities=27% Similarity=0.393 Sum_probs=56.3
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCC-----CcceEEeccCCC---------CEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNL-----KTRVRTLQGHSN---------WVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++| +++.+++++.++.+++|++... ......+..|.. .+..++|+|++..+++++.|+.+++||+
T Consensus 201 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 456 8899999999999999999763 255666776654 8999999999999999999999999997
Q ss_pred C
Q psy11876 67 N 67 (68)
Q Consensus 67 ~ 67 (68)
.
T Consensus 281 ~ 281 (342)
T 1yfq_A 281 Q 281 (342)
T ss_dssp T
T ss_pred c
Confidence 6
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.46 E-value=6.9e-13 Score=63.14 Aligned_cols=67 Identities=15% Similarity=0.282 Sum_probs=55.0
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCC------------------cceEEeccCCCCEEEEEEcCCCCEEE-EEeCCCCE
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLK------------------TRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDGSI 61 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i 61 (68)
++|++. .+++++.|+.+++|++.... .....+..|...+..++|+|++..++ +++.|+.+
T Consensus 267 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i 346 (357)
T 3i2n_A 267 HLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTV 346 (357)
T ss_dssp EETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred ECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcE
Confidence 467776 89999999999999986421 23556778889999999999987777 89999999
Q ss_pred EEEeCCC
Q psy11876 62 YTWDINK 68 (68)
Q Consensus 62 ~~~~~~~ 68 (68)
++|++.+
T Consensus 347 ~iw~~~~ 353 (357)
T 3i2n_A 347 RVLIVTK 353 (357)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9999763
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.46 E-value=4.7e-12 Score=61.31 Aligned_cols=64 Identities=11% Similarity=0.295 Sum_probs=56.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+.+|+. . ......+..|...+.+++|+|++..+++++.++.+.+||+.
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWNK-T-GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEET-T-SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred EcCCCCEEEEEeCCCeEEEEeC-C-CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 5678999999999999999994 3 45667788899999999999999999999999999999975
No 93
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.46 E-value=4.4e-12 Score=62.14 Aligned_cols=61 Identities=18% Similarity=0.453 Sum_probs=50.0
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEe--ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTL--QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++.|++|. |+.|++|+..+ +.....+ ..|...|.+++|+|++..+++++.|+.+.+||+.+
T Consensus 116 ~n~lAvgl-d~tV~lWd~~t-g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCEEEEEe-CCEEEEEECCC-CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC
Confidence 46777775 89999999987 4444433 45677899999999999999999999999999753
No 94
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.46 E-value=9.7e-13 Score=66.50 Aligned_cols=62 Identities=15% Similarity=0.243 Sum_probs=52.2
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEE--EEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNI--EFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
+..|++|+.|+.|++|++.....+...+..|...|.++ .+++++ ..+++++.|+++++||++
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 35799999999999999986334555678899999998 467776 899999999999999975
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=8.7e-13 Score=69.83 Aligned_cols=66 Identities=14% Similarity=0.129 Sum_probs=54.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCc---ceEEe--c-----cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKT---RVRTL--Q-----GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.|++|+...... ..... . +|...|.+++|+|+++.+++++.|+++++|++.
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYE 518 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEec
Confidence 578899999999999999999875211 11111 1 678899999999999999999999999999864
No 96
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.45 E-value=2.3e-12 Score=61.43 Aligned_cols=64 Identities=23% Similarity=0.352 Sum_probs=55.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEE--cCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEF--SSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|++.. ... .....|...+.+++| ++++..+++++.|+.+++||++
T Consensus 94 ~~~~~~~l~s~~~dg~v~iwd~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 94 WSDDGSKVFTASCDKTAKMWDLSS-NQA-IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred ECcCCCEEEEEcCCCcEEEEEcCC-CCc-eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 567889999999999999999986 333 345668899999999 8888899999999999999975
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.44 E-value=3.4e-12 Score=59.86 Aligned_cols=63 Identities=29% Similarity=0.511 Sum_probs=54.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++++. +++++.++.+++|+... ......+..|...+..++|+|++ .+++++.|+.+.+||++
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTT
T ss_pred EcCCCe-EEEccCCCeEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECC
Confidence 456666 89999999999999987 56777788899999999999988 58889999999999975
No 98
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.1e-12 Score=63.44 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=56.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCc--------------------ceEEeccCCC--CEEEEEEcCCCCEEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKT--------------------RVRTLQGHSN--WVKNIEFSSKDNLLVTAGFDG 59 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~--------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 59 (68)
++|+++.+++++.|+.+++|++.. .. ....+..+.. .+..++|+|+++.+++++.|+
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKK-LNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHH-HHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred EcCCCCEEEEEECCCeEEEEECCC-CccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 567899999999999999999875 33 5667777765 899999999999999999999
Q ss_pred CEEEEeCC
Q psy11876 60 SIYTWDIN 67 (68)
Q Consensus 60 ~i~~~~~~ 67 (68)
.+.+|+++
T Consensus 417 ~i~iw~~~ 424 (425)
T 1r5m_A 417 EGSVVAIP 424 (425)
T ss_dssp CCEEEECC
T ss_pred eEEEEeec
Confidence 99999985
No 99
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.44 E-value=9.7e-13 Score=63.78 Aligned_cols=66 Identities=27% Similarity=0.584 Sum_probs=57.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCC---CCcceEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARN---LKTRVRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.|+.+++|+... .......+..|...+.+++|+|+ +..+++++.|+.+++||++
T Consensus 75 ~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 75 WSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp ECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 567889999999999999999975 12356677789999999999998 8999999999999999975
No 100
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.44 E-value=1.3e-12 Score=64.25 Aligned_cols=64 Identities=19% Similarity=0.323 Sum_probs=55.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
+++++..+++|+.|+.+++|++.. .....+.+|...|.+++|+|.+ ..+++++.|+.+++||++
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred ECCCCCEEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 467889999999999999999864 3455677899999999999976 578899999999999976
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.44 E-value=2.8e-12 Score=63.07 Aligned_cols=66 Identities=30% Similarity=0.625 Sum_probs=56.6
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
++|++. ++++|+.|+.+++|+++....+...+..|...+..++|+|++ ..+++++.|+.+.+||+.
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 456664 799999999999999987556677788899999999999987 578999999999999974
No 102
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.44 E-value=8e-12 Score=59.06 Aligned_cols=66 Identities=17% Similarity=0.341 Sum_probs=56.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+..... ........+...+..++|+|++..+++++.++.+.+||++
T Consensus 105 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp ECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 56788999999999999999997632 1445567788889999999999999999999999999975
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.44 E-value=8.8e-12 Score=60.17 Aligned_cols=66 Identities=29% Similarity=0.450 Sum_probs=54.3
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCCcceEEe---------------ccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLKTRVRTL---------------QGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
++|++. .+++++.|+.+++|+++......... ..|...+..++|+|++..+++++.|+.+.+||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 456766 68999999999999997643333333 46778899999999999999999999999999
Q ss_pred CC
Q psy11876 66 IN 67 (68)
Q Consensus 66 ~~ 67 (68)
++
T Consensus 274 ~~ 275 (408)
T 4a11_B 274 SS 275 (408)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.44 E-value=5.6e-12 Score=61.67 Aligned_cols=64 Identities=22% Similarity=0.429 Sum_probs=53.2
Q ss_pred eeecC-cEEEEeeCCCCEEEeecCCCCcc----eEEeccCCC------------CEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 2 IFLDT-RVFATCSDDTTIALWDARNLKTR----VRTLQGHSN------------WVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
++|++ +.+++++.|+.+++|+++. ... ...+..+.. .+.+++|+|+++.+++++. +.+++|
T Consensus 234 ~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 234 FHPNSCNTFVYSSSKGTIRLCDMRA-SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTT-CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred ECCCCCcEEEEEeCCCeEEEEECcC-CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 46777 8999999999999999986 332 566766665 8999999999999999998 999999
Q ss_pred eCC
Q psy11876 65 DIN 67 (68)
Q Consensus 65 ~~~ 67 (68)
|++
T Consensus 312 d~~ 314 (447)
T 3dw8_B 312 DLN 314 (447)
T ss_dssp ETT
T ss_pred eCC
Confidence 986
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.44 E-value=3.6e-12 Score=61.03 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=56.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCC-----------------CCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARN-----------------LKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
++|+++.+++++.|+.+++|++.. .......+..|...+..++|+|++..+++++.|+.+++|
T Consensus 150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 229 (372)
T 1k8k_C 150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA 229 (372)
T ss_dssp ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred EcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 467889999999999999999631 134566677888899999999999999999999999999
Q ss_pred eCC
Q psy11876 65 DIN 67 (68)
Q Consensus 65 ~~~ 67 (68)
|++
T Consensus 230 d~~ 232 (372)
T 1k8k_C 230 DAD 232 (372)
T ss_dssp EGG
T ss_pred ECC
Confidence 974
No 106
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.43 E-value=2.4e-12 Score=62.13 Aligned_cols=65 Identities=20% Similarity=0.334 Sum_probs=54.7
Q ss_pred eeecC-cEEEEeeCCCCEEEeecCCCCcceEEec--cCCCCEEEEEEcC-CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDT-RVFATCSDDTTIALWDARNLKTRVRTLQ--GHSNWVKNIEFSS-KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++ +.+++|+.|+.+++|+... ......+. +|...+.+++|+| ++..+++++.|+.+++||++
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 81 WHPTHPTTVAVGSKGGDIILWDYDV-QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp ECSSCTTEEEEEEBTSCEEEEETTS-TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred ECCCCCCEEEEEcCCCeEEEEeCCC-cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 46777 8999999999999999986 33344443 6889999999999 67899999999999999975
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.43 E-value=2.9e-12 Score=60.85 Aligned_cols=65 Identities=11% Similarity=0.107 Sum_probs=55.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~ 66 (68)
++|++..+++++.|+.+++|+..... ........|...+.+++|+|++. .+++++.++.+.+|++
T Consensus 19 ~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 19 IIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp EEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred EcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 57889999999999999999987632 12444557888999999999999 9999999999999997
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.43 E-value=4.9e-12 Score=60.55 Aligned_cols=62 Identities=23% Similarity=0.474 Sum_probs=54.3
Q ss_pred CcEEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 67 (68)
++.+++++.|+.+++|+..... ........|...+.+++|+|+ +..+++++.|+.+.+||++
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~ 133 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK 133 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECC
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecC
Confidence 7899999999999999997622 155567778899999999998 8999999999999999975
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.1e-12 Score=68.23 Aligned_cols=66 Identities=24% Similarity=0.516 Sum_probs=57.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCC-CcceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNL-KTRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|+.... ......+.+|...|.+++|++. +..+++++.|+.+++||+.
T Consensus 17 ~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 17 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp CCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 5788999999999999999998631 3455667889999999999987 8999999999999999864
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.41 E-value=1e-11 Score=61.03 Aligned_cols=63 Identities=25% Similarity=0.552 Sum_probs=53.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.++++.+++|+.|+.+++|+..+ ......+.+|...+.++++ ++..+++++.|+.+++||+.
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNT-LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSS-CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred EEECCCEEEEEeCCCeEEEEeCCC-CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence 345788999999999999999877 5667778889999988887 67899999999999999875
No 111
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.41 E-value=7.9e-13 Score=64.71 Aligned_cols=65 Identities=17% Similarity=0.311 Sum_probs=54.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec-cCCCCEEEEEEcC----CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ-GHSNWVKNIEFSS----KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++|+.|+.+++|+++. ..+...+. .+...+.+++++| ++..+++++.|+.+++||++
T Consensus 222 ~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 222 IDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 567899999999999999999987 55565554 6777889997765 46689999999999999986
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.40 E-value=7.4e-12 Score=60.69 Aligned_cols=67 Identities=18% Similarity=0.210 Sum_probs=53.6
Q ss_pred eeecCcEEEEeeCCC----CEEEeecCCCCc---ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDDT----TIALWDARNLKT---RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~----~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++|++..+++++.++ .+..|+...... ....+..|...|.+++|+|+++++++++.|+.|++||.++
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 678999999988876 567777754211 2334667888999999999999999999999999999763
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.40 E-value=1.4e-11 Score=60.64 Aligned_cols=67 Identities=25% Similarity=0.549 Sum_probs=56.1
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeCCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~ 68 (68)
++| ++..+++++.|+.+++|+++... .+...+..|...+.+++|+|.+. .+++++.++.+.+||+++
T Consensus 239 ~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 239 WHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 345 57899999999999999998632 45666778899999999999875 788999999999999863
No 114
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.40 E-value=3.6e-12 Score=60.70 Aligned_cols=62 Identities=23% Similarity=0.416 Sum_probs=53.2
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEE------cCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEF------SSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..+++++.|+.+++|+......+...+..|...+.++.| ++++..+++++.|+.+++||++
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~ 147 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPR 147 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTT
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCC
Confidence 6899999999999999998743367788889999999955 5788899999999999999975
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.40 E-value=1.5e-11 Score=60.56 Aligned_cols=63 Identities=25% Similarity=0.487 Sum_probs=54.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.++++.+++|+.|+.+++|+..+ ......+.+|...+.+++++ +..+++++.|+.+++||+.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTT-CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred EEEcCCEEEEEECCCcEEEEECCC-CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 456788999999999999999987 56677788899999999886 5689999999999999975
No 116
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.40 E-value=1e-11 Score=66.81 Aligned_cols=65 Identities=32% Similarity=0.504 Sum_probs=58.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcC--CCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSS--KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|+..+ ......+.+|...+.+++|++ +...+++++.|+.+.+||++
T Consensus 665 ~s~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~ 731 (1249)
T 3sfz_A 665 FSSDDSYIATCSADKKVKIWDSAT-GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN 731 (1249)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETT
T ss_pred EecCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECC
Confidence 578899999999999999999987 667778889999999999999 45688999999999999975
No 117
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.39 E-value=1.4e-11 Score=60.09 Aligned_cols=65 Identities=29% Similarity=0.449 Sum_probs=55.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEe--CCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAG--FDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~i~~~~~~ 67 (68)
++|+++.+++++.|+.+++|++.. ..+...+..|...+.+++|+|++ ..+++++ .|+.+.+||++
T Consensus 225 ~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 225 WRSDGLQLASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred EcCCCCEEEEEeCCCeEEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 467889999999999999999987 56677778899999999999965 6777765 79999999975
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.38 E-value=2.2e-11 Score=58.78 Aligned_cols=56 Identities=16% Similarity=0.214 Sum_probs=47.9
Q ss_pred eeCCCCEEEeecCCCC--------------cc-eEEeccCCCCEEEEEEcCCCCEEEEEeCCCC-EEEEeCC
Q psy11876 12 CSDDTTIALWDARNLK--------------TR-VRTLQGHSNWVKNIEFSSKDNLLVTAGFDGS-IYTWDIN 67 (68)
Q Consensus 12 ~~~~~~v~~~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~ 67 (68)
|+.++.+++|++.... .+ ...+.+|...|.+++|+|++.++++++.|++ +++||++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 6899999999997622 12 5678899999999999999999999999999 9999986
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.8e-11 Score=63.83 Aligned_cols=65 Identities=22% Similarity=0.427 Sum_probs=56.0
Q ss_pred eec--CcEEEEeeCCCCEEEeecCCCC-cceEEeccCCCCEEEEEEcCC--CCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLD--TRVFATCSDDTTIALWDARNLK-TRVRTLQGHSNWVKNIEFSSK--DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 67 (68)
+++ ++.+++|+.|+.+++|+..... ........|...+.+++|+|+ +..+++++.|+.+++||++
T Consensus 62 s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~ 131 (753)
T 3jro_A 62 AHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK 131 (753)
T ss_dssp CCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECC
T ss_pred cCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEee
Confidence 455 8899999999999999997622 145667789999999999998 8999999999999999975
No 120
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.34 E-value=1.6e-12 Score=64.32 Aligned_cols=66 Identities=17% Similarity=0.320 Sum_probs=53.0
Q ss_pred eeecCcEEE----EeeCCCCEEEeecCCC-----C--cc---eEEeccCCCCEEEEEEcCC-CCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFA----TCSDDTTIALWDARNL-----K--TR---VRTLQGHSNWVKNIEFSSK-DNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~----~~~~~~~v~~~~~~~~-----~--~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~ 66 (68)
++++++.++ +++.|+.+++|++... . .+ .....+|...+..++|+|+ +..+++++.|+++++||+
T Consensus 100 ~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~ 179 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQV 179 (434)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEE
T ss_pred EcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEc
Confidence 567888888 7889999999997531 0 11 2334568889999999997 789999999999999997
Q ss_pred C
Q psy11876 67 N 67 (68)
Q Consensus 67 ~ 67 (68)
+
T Consensus 180 ~ 180 (434)
T 2oit_A 180 T 180 (434)
T ss_dssp S
T ss_pred C
Confidence 5
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.34 E-value=8.5e-12 Score=61.57 Aligned_cols=66 Identities=12% Similarity=0.164 Sum_probs=55.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCc---ceEEeccCCCCEEEEEEcCC---CCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKT---RVRTLQGHSNWVKNIEFSSK---DNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.++.+.+|++..... +...+.+|...+.+++|+|+ +..+++++.|+.+++||++
T Consensus 157 ~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 157 IAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred EcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 567899999999999999999865221 22255678889999999999 8899999999999999975
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.29 E-value=2.2e-10 Score=56.36 Aligned_cols=61 Identities=34% Similarity=0.588 Sum_probs=53.5
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+++.+++|+.|+.+++|+..+ ......+..|...+.++++++ ..+++++.|+.+.+||++
T Consensus 181 ~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~ 241 (435)
T 1p22_A 181 YDERVIITGSSDSTVRVWDVNT-GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMA 241 (435)
T ss_dssp CCSSEEEEEETTSCEEEEESSS-CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECS
T ss_pred ECCCEEEEEcCCCeEEEEECCC-CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCC
Confidence 4788999999999999999987 566777888999999999864 589999999999999975
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.28 E-value=5.2e-11 Score=58.09 Aligned_cols=62 Identities=8% Similarity=0.062 Sum_probs=46.6
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCC---CCEEEEEEcCCCCEE------------EEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHS---NWVKNIEFSSKDNLL------------VTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------------~~~~~~~~i~~~~~~ 67 (68)
++..+++++.|+.|++|+..+ +..+..+.++. ..+..++|+|++..+ ++++.|+++++||..
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~T-Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKT-GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp STTEEEEEETTSEEEEEETTT-CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CCceEEEecCCCcEEEEECCC-CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 568899999999999999988 66677776543 356677899988765 567788999999965
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.27 E-value=1.9e-10 Score=56.65 Aligned_cols=64 Identities=25% Similarity=0.405 Sum_probs=53.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEe-----ccCCCCEEEEEEcCCCCEEEEEeCCCC----EEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTL-----QGHSNWVKNIEFSSKDNLLVTAGFDGS----IYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~ 67 (68)
..+++.+++++.|+.+++|+... ......+ ..+...+..++|+|++..+++++.|+. +.+||+.
T Consensus 369 ~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 369 QFNKNFVITSSDDGTVKLWDLKT-GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EECSSEEEEEETTSEEEEEETTT-CCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EECCCEEEEEeCCCeEEEEECCC-CceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 34678999999999999999987 4444444 356778999999999999999999998 9999986
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.12 E-value=1.2e-09 Score=53.43 Aligned_cols=64 Identities=11% Similarity=0.195 Sum_probs=53.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEE-EEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLL-VTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 67 (68)
++++..+++++.++.+++|+... ......+..+...+..++|+|++..+ +++..++.+.+||++
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKT-LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTT-CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCCCEEEEEECCCCEEEEEECCC-ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 46788999999999999999987 45566676788889999999998766 455578999999975
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.02 E-value=1e-09 Score=53.71 Aligned_cols=65 Identities=17% Similarity=0.296 Sum_probs=52.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceE-----EeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVR-----TLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|++..+++++.++.+.+|+... ..... ....|...+..++|++++..+++++.++.+.+||..
T Consensus 130 ~s~~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 130 FIDNTRLAIPLLEDEGMDVLDINS-GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp ESSSSEEEEEBTTSSSEEEEETTT-CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT
T ss_pred EeCCCeEEEEeCCCCeEEEEECCC-CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC
Confidence 456677888888889999999976 33333 233567788999999999999999999999999975
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.00 E-value=7.9e-09 Score=50.05 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=49.0
Q ss_pred eeecCcEE-EEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEE-EEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVF-ATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLL-VTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 67 (68)
++|+++.+ ++++.++.+++|+... ......+..+. .+..++|+|+++.+ +++..++.+.+||+.
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~-~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTAT-NNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTT-TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEEEECCCCCeEEEEECCC-CeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 56788765 6777899999999977 45555554443 78999999998766 455567999999975
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.98 E-value=2.1e-08 Score=48.58 Aligned_cols=64 Identities=9% Similarity=0.059 Sum_probs=49.9
Q ss_pred eeecCcEEEEee---CCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEE-EEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCS---DDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLL-VTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++ .++.+.+|+... ......+..+. .+..++++|+++.+ ++++.++.+.+||..
T Consensus 207 ~~~~g~~l~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 207 VNPEGTKAYVTNVDKYFNTVSMIDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEEEEecCcCCCcEEEEECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 567888888777 689999999987 45555555544 46789999998766 677889999999975
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.93 E-value=7.2e-08 Score=47.69 Aligned_cols=64 Identities=17% Similarity=0.195 Sum_probs=49.6
Q ss_pred eeecCcEEEEeeCCC---CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEE-EEeCCCC--EEEEeCC
Q psy11876 2 IFLDTRVFATCSDDT---TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLV-TAGFDGS--IYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--i~~~~~~ 67 (68)
++|+++.++.++.++ .+++|++.. ... ..+..+...+..++|+|+++.++ +++.++. +.+||+.
T Consensus 186 ~Spdg~~la~~s~~~~~~~i~~~d~~t-g~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 186 WSPDGSKLAYVTFESGRSALVIQTLAN-GAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTT-CCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCC-CcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 678999999998875 899999986 333 34556777889999999998776 6666654 8888875
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.93 E-value=2.3e-08 Score=51.07 Aligned_cols=63 Identities=25% Similarity=0.245 Sum_probs=52.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++|++..++++..++.+.+|+..+ ......+..... ++.++++|+++.+.+++.++.+.+||+
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t-~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDS-KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTT-CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred cCCCCEEEEEEcCCCeEEEEECCC-ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEEC
Confidence 456778889999999999999987 455556653333 789999999999999999999999998
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.88 E-value=4.5e-08 Score=50.01 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=51.3
Q ss_pred eeecCcEEEEeeCCCCEEEeec--CCCCcceEEeccCCCCEEEEEEcC----CCCEEEEEe-CCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDA--RNLKTRVRTLQGHSNWVKNIEFSS----KDNLLVTAG-FDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~i~~~~~~ 67 (68)
++|+++.+++++.++.+.+|+. .+ ......+. +...+..++++| +++.+.+++ .++++.+||..
T Consensus 186 ~spdg~~l~v~~~d~~V~v~D~~~~t-~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 186 MSASGRYLLVIGRDARIDMIDLWAKE-PTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSS-CEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred ECCCCCEEEEECCCCeEEEEECcCCC-CcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 6889999999999999999999 55 44455555 344568999999 998887776 58999999864
No 132
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.88 E-value=2.2e-08 Score=54.04 Aligned_cols=65 Identities=9% Similarity=0.083 Sum_probs=52.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC----------CCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD----------GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~i~~~~~~ 67 (68)
++|+++.++.++.++.+++|+..+ .........+...+..++|+|+++.++.++.+ +.+.+||..
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred ECCCCCEEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 578999999999999999999977 44444555677778899999999988776654 489999875
No 133
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.86 E-value=3.6e-08 Score=50.21 Aligned_cols=64 Identities=8% Similarity=-0.049 Sum_probs=50.6
Q ss_pred eeecCcEEEEeeCC----CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCC--CEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD----TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDG--SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~ 67 (68)
++|||+.++.++.+ ..+.+|+... .. ...+..+...+...+|+|+++.+++...++ .|.+||..
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 67999999977776 6788888765 33 335667777788999999999988777787 78888864
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.70 E-value=1.6e-07 Score=48.86 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=48.0
Q ss_pred eeecCcEEEEeeC-CC-----CEEEeecCCCCcceEEeccCCC------------------------CEEEEEEcCCCCE
Q psy11876 2 IFLDTRVFATCSD-DT-----TIALWDARNLKTRVRTLQGHSN------------------------WVKNIEFSSKDNL 51 (68)
Q Consensus 2 ~~~~~~~~~~~~~-~~-----~v~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 51 (68)
++||++.++.++. ++ .+.+|+... .........+.. .+..++|+|+++.
T Consensus 44 ~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~ 122 (741)
T 2ecf_A 44 VAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR 122 (741)
T ss_dssp ECTTSSEEEEEECCSSCTTEEEEEEEETTT-CCEEEEECGGGTC--------------------CCEESCCCEECTTSSE
T ss_pred EecCCCEEEEEeccCCCCcccEEEEEECCC-CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE
Confidence 6789999999888 77 899999876 333333332221 2678899999998
Q ss_pred EEEEeCCCCEEEEeCC
Q psy11876 52 LVTAGFDGSIYTWDIN 67 (68)
Q Consensus 52 ~~~~~~~~~i~~~~~~ 67 (68)
++.++. +.+.+||..
T Consensus 123 l~~~~~-~~i~~~d~~ 137 (741)
T 2ecf_A 123 LLFPLG-GELYLYDLK 137 (741)
T ss_dssp EEEEET-TEEEEEESS
T ss_pred EEEEeC-CcEEEEECC
Confidence 888775 899999875
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.68 E-value=4.1e-07 Score=43.12 Aligned_cols=62 Identities=8% Similarity=0.113 Sum_probs=47.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.++++ ++.+.+|+... ......+.. ...+..++|+|+++.+..++.++.+.+||..
T Consensus 248 ~s~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 248 VNPAKTRAFGA--YNVLESFDLEK-NASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp ECTTSSEEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred ECCCCCEEEEe--CCeEEEEECCC-CcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 46788888877 68999999976 444444432 3446788999999888878889999999975
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.66 E-value=2.8e-07 Score=42.77 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=47.9
Q ss_pred eeecCcEEEEee-CCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC-----------CCEEEEeCC
Q psy11876 2 IFLDTRVFATCS-DDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD-----------GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~i~~~~~~ 67 (68)
++|+++.++.++ .++.+.+|.+.........+..+...+..+.|+|+++.++.++.+ ..+.+||..
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred ECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 467888766555 588899998863244455666666777889999999888776654 468888864
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.66 E-value=9.2e-08 Score=49.62 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=48.0
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC---CEEEEEEcCCCCEEEEEeCC---------CCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN---WVKNIEFSSKDNLLVTAGFD---------GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~i~~~~~~ 67 (68)
++|+++++++ +.|+.+++|+..+ .........+.. .+..++|+|+++.++.++.+ +.+.+||+.
T Consensus 24 ~spdg~~~~~-~~dg~i~~~d~~~-g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 24 WISDTEFIYR-EQKGTVRLWNVET-NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp BSSSSCBCCC-CSSSCEEEBCGGG-CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred EcCCCcEEEE-eCCCCEEEEECCC-CcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC
Confidence 5788886665 6789999999976 444445554543 37899999999988888654 678899865
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.66 E-value=5.2e-07 Score=41.86 Aligned_cols=65 Identities=11% Similarity=0.148 Sum_probs=47.9
Q ss_pred eeecCcEEE-EeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe-CCCCEEEEeC
Q psy11876 2 IFLDTRVFA-TCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 66 (68)
++|+++.++ ++..++.+.+|.+.........+..+...+..+.|+|+++.++..+ .++.+.+|++
T Consensus 136 ~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEE
Confidence 567887665 7878898999986532334455666777889999999998766554 5888888875
No 139
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.65 E-value=1.5e-06 Score=43.10 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=45.7
Q ss_pred eeecCcEEE-EeeCCCC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC-CC--CEEEEeCC
Q psy11876 2 IFLDTRVFA-TCSDDTT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF-DG--SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~i~~~~~~ 67 (68)
++|+++.++ +++.++. +.+|+... .. ...+..+...+..++|+|+++.++..+. ++ .+.+||..
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLAS-GQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTT-CC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCC-CC-EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 578898776 6666655 78888876 32 3456667778899999999987776665 45 56666754
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.65 E-value=3.2e-08 Score=50.41 Aligned_cols=63 Identities=17% Similarity=0.095 Sum_probs=48.5
Q ss_pred eeecCcEEEEeeCCC--CEEEeecCCCCcceEEeccCCCCEEEEE--------EcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDT--TIALWDARNLKTRVRTLQGHSNWVKNIE--------FSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++||++.++++..++ .+.+|+... .... ....+...+.... |+|++..+++++.++.+.+|++
T Consensus 202 ~SpDG~~l~~~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 202 ISPGMKVTAGLETAREARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTSCEEEEEECSSCEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ECCCCCEEEEccCCCeeEEEEEcCCC-CcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 688999999888888 788888876 3333 5555555454455 9999988899999999999975
No 141
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.63 E-value=3.7e-07 Score=43.51 Aligned_cols=62 Identities=11% Similarity=0.123 Sum_probs=45.8
Q ss_pred eee-cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFL-DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++| +++.++.+ ++.+.+|+..+ ......+.. ...+..+++++++..+..++.++.+.+||..
T Consensus 262 ~sp~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 262 RSPKDPNQIYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp ECSSCTTEEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred ecCCCCCEEEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 357 88888887 78999999976 444434432 2345788999998766667778999999975
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.60 E-value=9.4e-07 Score=46.12 Aligned_cols=64 Identities=14% Similarity=0.195 Sum_probs=49.3
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCc-ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKT-RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++||++.++.++. +.+.+|+...... ....+..+...+..++|+|+++.++.++ ++.+.+||..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~ 180 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLA 180 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecC
Confidence 6789999988886 8999999876210 2334555667789999999999888876 4689999875
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.58 E-value=9.2e-07 Score=42.06 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=45.5
Q ss_pred eeecCcEEEEeeC-CCCEEEeecCCCCcc-eEEeccCCCCEEEEEEcCCCCEEEEEeCCC---CEEEEeCC
Q psy11876 2 IFLDTRVFATCSD-DTTIALWDARNLKTR-VRTLQGHSNWVKNIEFSSKDNLLVTAGFDG---SIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~ 67 (68)
++|+++.+++++. ++.+.+|+... ... ......+......++++|+++.+++...++ .+.+||..
T Consensus 47 ~s~dg~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~ 116 (331)
T 3u4y_A 47 ITSDCSNVVVTSDFCQTLVQIETQL-EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL 116 (331)
T ss_dssp ECSSSCEEEEEESTTCEEEEEECSS-SSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT
T ss_pred EcCCCCEEEEEeCCCCeEEEEECCC-CceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC
Confidence 5788886655555 78999999977 333 444555555544489999998888554442 89999975
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.57 E-value=9.2e-07 Score=42.00 Aligned_cols=64 Identities=6% Similarity=0.001 Sum_probs=45.0
Q ss_pred eeecCcEEEEeeCC-CCEEEeecCCC-Cc--ceEEeccCCCCEEEEEEcCCCCEEEEEe-CCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDD-TTIALWDARNL-KT--RVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-~~v~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 66 (68)
++|+++.+++++.+ +.+.+|++... .. ......... .+..++|+|+++.++.++ .++.+.+|++
T Consensus 45 ~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 45 VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 57888888888876 89999998721 22 222333333 668899999998665554 5788999986
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.57 E-value=4.1e-06 Score=40.04 Aligned_cols=65 Identities=9% Similarity=0.104 Sum_probs=47.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEecc----CCCCEEEEEEcCCCCEEEEE-eCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQG----HSNWVKNIEFSSKDNLLVTA-GFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 67 (68)
++|+++.++.+..++.+.+|+..+ ......... +...+..++++|++..+... ..++.+.+||..
T Consensus 192 ~s~dg~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 192 LDSEGKRLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp EETTTTEEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred ECCCCCEEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 567889999999999999999876 444434332 34456778999998765544 445899999875
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.57 E-value=9.8e-07 Score=42.16 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=48.5
Q ss_pred eeecCcEEEEee--CCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCS--DDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.++.+. .++.+.+|+... ......+..+...+..+.++|+++.+...+.++.+.+||..
T Consensus 148 ~s~dg~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~ 214 (353)
T 3vgz_A 148 ADDATNTVYISGIGKESVIWVVDGGN-IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTA 214 (353)
T ss_dssp EETTTTEEEEEEESSSCEEEEEETTT-TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT
T ss_pred ECCCCCEEEEEecCCCceEEEEcCCC-CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECC
Confidence 467777776665 467899999976 44454554344456788999999888888889999999875
No 147
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.54 E-value=6.3e-07 Score=43.44 Aligned_cols=65 Identities=14% Similarity=0.076 Sum_probs=44.8
Q ss_pred eeecCcEEEEeeC-CCC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSD-DTT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~-~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++||++.++.++. ++. +.+|+... .........+...+....|+|+++.++....++.+.+||+.
T Consensus 43 ~SpDg~~l~~~~~~~g~~~l~~~d~~~-g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGPWNYYLLDLNT-QVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTT-CEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETT
T ss_pred CCCCCCEEEEEEcCCCCceEEEEeCCC-CceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECC
Confidence 6889988877776 664 66667655 33332233333333356799999999988888889999875
No 148
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.53 E-value=2e-06 Score=42.04 Aligned_cols=63 Identities=19% Similarity=0.341 Sum_probs=46.3
Q ss_pred eeecCcEEEEeeC-----------CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSD-----------DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++++++.++.+.. ...+.+||..+ .+.+..+..+. ...++++|+++.+.+++. +.+.+||..+
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 4566666665432 34788999987 55666666655 789999999988887776 9999999753
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.51 E-value=1.8e-06 Score=41.47 Aligned_cols=65 Identities=8% Similarity=0.198 Sum_probs=45.2
Q ss_pred eeecCcEE-EEeeCCCCEEEeecCCCC--cceEEeccCCCCEEEEEEcCCCCEEEEEeC-CCCEEEEeC
Q psy11876 2 IFLDTRVF-ATCSDDTTIALWDARNLK--TRVRTLQGHSNWVKNIEFSSKDNLLVTAGF-DGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~ 66 (68)
++|+++.+ ++...++.+.+|++.... ........+...+..++|+|+++.++.++. ++.+.+|++
T Consensus 247 ~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 247 LSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp ECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 67888876 555567899999986322 223334444555678999999987766655 588999943
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.50 E-value=4.9e-06 Score=39.54 Aligned_cols=66 Identities=14% Similarity=0.249 Sum_probs=45.4
Q ss_pred eeecCcEEEEee-CCCCEEEeecCCCCcceE----Eec-cCCCCEEEEEEcCCCCEEE-EEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCS-DDTTIALWDARNLKTRVR----TLQ-GHSNWVKNIEFSSKDNLLV-TAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++ .++.+.+|++........ ... .....+..++|+|+++.+. +...++.+.+|++.
T Consensus 136 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 136 ISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred ECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 567888777776 789999999875222211 122 2234667899999987554 55578999999873
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.50 E-value=3.7e-07 Score=47.52 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=45.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC---CEEEEEEcCCCCEEEEEeC---------CCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN---WVKNIEFSSKDNLLVTAGF---------DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~ 67 (68)
++|++.+++.+ .++.+++|+... .........+.. .+..++|+|+++.++.++. ++.+.+||+.
T Consensus 23 ~s~dg~~~~~~-~d~~i~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 23 WISGQEYLHQS-ADNNIVLYNIET-GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp ESSSSEEEEEC-TTSCEEEEESSS-CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ECCCCeEEEEc-CCCCEEEEEcCC-CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 46778655544 589999999976 444444443322 3788999999998887765 6899999875
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.48 E-value=3.2e-06 Score=40.57 Aligned_cols=66 Identities=9% Similarity=0.148 Sum_probs=45.2
Q ss_pred eeecCcEEEEee-CCCCEEEeecCCCCc--ceEEecc---------CCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCS-DDTTIALWDARNLKT--RVRTLQG---------HSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++++ .++.+.+|++..... ....... ....+..++++|+++.+++...++.+.+|++.
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 578898887777 678899999863222 1222211 11246789999998866666678889999865
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.48 E-value=4.5e-06 Score=39.80 Aligned_cols=65 Identities=11% Similarity=0.083 Sum_probs=47.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCC-CCEEEEEEcCCCCEE-EEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHS-NWVKNIEFSSKDNLL-VTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 67 (68)
+.+++..+++++.++.+.+|+..+ ......+.... ..+..++++|+++.+ ++...++.+.+||..
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~ 73 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVAS-DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 73 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTT-TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ccCCCEEEEEeCCCCeEEEEECCC-CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC
Confidence 456778889999999999999977 44444444332 145788999998754 566678899999875
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.46 E-value=2.1e-06 Score=44.73 Aligned_cols=55 Identities=11% Similarity=-0.019 Sum_probs=38.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCC------------------EEEEEEcCCCCEEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNW------------------VKNIEFSSKDNLLVTAGFD 58 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~ 58 (68)
++||++.++.++. +.+.+|+... .........+... +..+.|+|+++.++.++.+
T Consensus 121 ~SPdG~~la~~~~-~~i~~~~~~~-g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 121 WGPKGQQLIFIFE-NNIYYCAHVG-KQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp BCSSTTCEEEEET-TEEEEESSSS-SCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred ECCCCCEEEEEEC-CeEEEEECCC-CceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 6899998888886 6899999876 3333333332222 2679999999988877643
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.43 E-value=4.2e-06 Score=39.68 Aligned_cols=62 Identities=16% Similarity=0.269 Sum_probs=44.5
Q ss_pred eeecCcEEEEee------------CCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCS------------DDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.++.+. .++.+.+|+... ......+.. ...+..+.|+|+++.++.+ ++.+.+||..
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPE 162 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCC-CcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECC
Confidence 467888887775 568999999976 444444433 3446778899998766665 6889999875
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.43 E-value=8e-06 Score=38.85 Aligned_cols=63 Identities=8% Similarity=0.074 Sum_probs=44.4
Q ss_pred eecC-cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEE-eCCCCEEEEeCC
Q psy11876 3 FLDT-RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTA-GFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 67 (68)
..++ ..+++...++.+.+|+..+ .........+.... .++++|+++.+... ..++.+.+||..
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~ 70 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDT-LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQ 70 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTT-CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECS
T ss_pred cCCCCEEEEEecCCCeEEEEeCcc-cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECC
Confidence 3444 4577888889999999987 44444554444555 89999998755544 447899999875
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.41 E-value=3.1e-06 Score=44.06 Aligned_cols=53 Identities=15% Similarity=0.363 Sum_probs=35.9
Q ss_pred CCCCEEEeecCCCCcceEEe--ccCCCCEEEEEEcCCCCEEEEEeCCC-----CEEEEeCC
Q psy11876 14 DDTTIALWDARNLKTRVRTL--QGHSNWVKNIEFSSKDNLLVTAGFDG-----SIYTWDIN 67 (68)
Q Consensus 14 ~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~ 67 (68)
.+..+.+|+... ....... ..+...+..++|+|+++.++.++.++ .+.+||..
T Consensus 233 ~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~ 292 (706)
T 2z3z_A 233 HHVTVGIYHLAT-GKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE 292 (706)
T ss_dssp CEEEEEEEETTT-TEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT
T ss_pred CeeEEEEEECCC-CceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC
Confidence 345688888876 3322222 13456678999999999888766554 78888865
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.39 E-value=4.9e-06 Score=40.18 Aligned_cols=64 Identities=13% Similarity=0.117 Sum_probs=44.1
Q ss_pred eeecCcEEEEeeCC--CCEEEeecCCC-Cc--ceEEeccCCCCEEEEEEcCCCCEEEEEe-CCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDD--TTIALWDARNL-KT--RVRTLQGHSNWVKNIEFSSKDNLLVTAG-FDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~--~~v~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 66 (68)
++|+++.++++..+ +.+.+|++... .. ....... ...+..++|+|+++.++.++ .++.+.+|.+
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 67899988776665 78999998621 22 2222333 44567899999998777666 5688999653
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.36 E-value=4.7e-06 Score=40.25 Aligned_cols=65 Identities=9% Similarity=0.107 Sum_probs=44.1
Q ss_pred eeecCcEEEEee-CCCCEEEeecCCCCcc--eEEec---cCCCCEEEEEEcCCCCEEEEEeC--CCCEEEEeCC
Q psy11876 2 IFLDTRVFATCS-DDTTIALWDARNLKTR--VRTLQ---GHSNWVKNIEFSSKDNLLVTAGF--DGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~ 67 (68)
++|+++.++.+. .++.+.+|++.. ... ..... .+......++|+|+++.+..... ++.+.+|++.
T Consensus 218 ~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 218 FNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp ECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 678888776666 688999999864 221 11221 22244578999999987755544 5889999863
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.30 E-value=4.1e-06 Score=43.74 Aligned_cols=55 Identities=16% Similarity=0.154 Sum_probs=36.9
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEE-eccCCCCE-----------------EEEEEcCCCCEEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRT-LQGHSNWV-----------------KNIEFSSKDNLLVTAGFD 58 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 58 (68)
++||++.|+.+. ++.+++|+... ...... ..++...+ ..+.|+|+++.++.++.+
T Consensus 117 ~SPDG~~la~~~-~~~i~~~~~~~-g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 117 WSPVGSKLAYVY-QNNIYLKQRPG-DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp ECSSTTCEEEEE-TTEEEEESSTT-SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred ECCCCCEEEEEE-CCeEEEEeCCC-CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 689999888886 67999999865 222211 12222212 378999999988877654
No 161
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.30 E-value=1.1e-05 Score=44.04 Aligned_cols=61 Identities=15% Similarity=0.169 Sum_probs=47.0
Q ss_pred cCcEEEEeeCCCCEE-EeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIA-LWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.++.++.+..+. +|+... .. ...+..+...+..++|+|+++.++.++.++.+.+||+.
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCeEEEEECCCceEEEEECCC-CC-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECC
Confidence 667777777776677 777765 22 23344666788999999999999999999999999975
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.27 E-value=2e-05 Score=38.38 Aligned_cols=66 Identities=11% Similarity=0.130 Sum_probs=44.1
Q ss_pred eeecCcE--EEEee-------------CCCCEEEeecCCCCcceEEec----cCCCCEEEEEEcCCCCEEEEEeC-CCCE
Q psy11876 2 IFLDTRV--FATCS-------------DDTTIALWDARNLKTRVRTLQ----GHSNWVKNIEFSSKDNLLVTAGF-DGSI 61 (68)
Q Consensus 2 ~~~~~~~--~~~~~-------------~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~i 61 (68)
++|+++. ++++. .++.+.+|++........... .+...+..++|+|+++.+..++. ++.+
T Consensus 90 ~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v 169 (365)
T 1jof_A 90 ADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKL 169 (365)
T ss_dssp TTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred ECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEE
Confidence 5678873 45553 678899999864233222222 23456789999999987766554 5789
Q ss_pred EEEeCC
Q psy11876 62 YTWDIN 67 (68)
Q Consensus 62 ~~~~~~ 67 (68)
.+|++.
T Consensus 170 ~~~~~~ 175 (365)
T 1jof_A 170 WTHRKL 175 (365)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999864
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.26 E-value=2.3e-05 Score=36.76 Aligned_cols=63 Identities=6% Similarity=0.210 Sum_probs=43.5
Q ss_pred eeecCcEEEEeeCCC-CEEEeecCCCCcceEEeccCC--CCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDT-TIALWDARNLKTRVRTLQGHS--NWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.++++++++...++ .+.+|+... .....+..+. ..+..+++.++++++++ +.++.+.+|++.
T Consensus 214 ~d~~G~l~v~~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 214 INSNGEILIADNHNNFNLTIFTQDG--QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp ECTTCCEEEEECSSSCEEEEECTTS--CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred ECCCCCEEEEeCCCCEEEEEECCCC--CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 456777777776665 899998643 3333443332 23678899999887777 568999999874
No 164
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.21 E-value=4.8e-05 Score=36.35 Aligned_cols=64 Identities=19% Similarity=0.121 Sum_probs=44.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC----CCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD----GSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~ 67 (68)
.+++++++++..++.+.+|+... .............+..+++.++++++++...+ +.+.+||..
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPET-KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTT-CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CCCCCEEEEECCCCEEEEEeCCC-CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 46777777777788899998865 33222222445678899999999888777655 578888754
No 165
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.20 E-value=4.6e-05 Score=36.00 Aligned_cols=62 Identities=6% Similarity=-0.022 Sum_probs=47.8
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
+.++++ .++++..++.+..|+... . ...+......+..+++.++++++++...++.+.+|+.
T Consensus 35 ~d~~g~~l~~~~~~~~~i~~~~~~~-~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 35 YVPARSAVIFSDVRQNRTWAWSDDG-Q--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTS-C--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EeCCCCEEEEEeCCCCEEEEEECCC-C--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 456777 778888888999999876 3 4445555667889999999988887777788888886
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.20 E-value=5.5e-06 Score=43.70 Aligned_cols=63 Identities=14% Similarity=0.135 Sum_probs=46.8
Q ss_pred eeecCcEEEEeeCC---------CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---------TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++||++.++.++.+ +.+.+|++.+ +. ...+..+...+...+|+|+++.++.+ .++.|.+|+..
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~-~~-~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~ 140 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK-RQ-LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEP 140 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-TE-ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESST
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCC-Cc-EEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECC
Confidence 58999998888875 4556899876 32 22345566678899999999888777 46788888764
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.14 E-value=4.3e-05 Score=39.67 Aligned_cols=63 Identities=16% Similarity=0.080 Sum_probs=42.5
Q ss_pred eeecCcEEEEeeCC--------CCEEEeecCCCC---cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEE
Q psy11876 2 IFLDTRVFATCSDD--------TTIALWDARNLK---TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 2 ~~~~~~~~~~~~~~--------~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
++||++.|+.++.+ ..+.+|++.... ........+...+....|+|+++++++...++...+|
T Consensus 195 ~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 195 LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLH 268 (662)
T ss_dssp ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEE
T ss_pred ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEE
Confidence 67899988877644 368888887213 2222333345678899999999877788777744444
No 168
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.11 E-value=8e-05 Score=38.98 Aligned_cols=65 Identities=17% Similarity=0.117 Sum_probs=44.7
Q ss_pred eee--cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEE-EEEcCCCCEEEE-EeCCC----CEEEEeC
Q psy11876 2 IFL--DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKN-IEFSSKDNLLVT-AGFDG----SIYTWDI 66 (68)
Q Consensus 2 ~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~----~i~~~~~ 66 (68)
++| ++++++++..++.+.+|.+.........+..+...+.. +.|+|+++.++. +..++ .+..|+.
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 467 88899999999999999876324445556666666765 799999876654 44444 4555554
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.09 E-value=2.7e-05 Score=41.20 Aligned_cols=63 Identities=13% Similarity=0.144 Sum_probs=44.1
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCC-----EEEEEEcCCCCEEEEEeCC---------CCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNW-----VKNIEFSSKDNLLVTAGFD---------GSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---------~~i~~~~~~ 67 (68)
.+|++..++++ |+.+.+|+..+ +.....+..+... ...+.|+|+++.++..+.+ +.+.+||+.
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~ 100 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEY-GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN 100 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTT-CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ECCCCcEEEEc--CCcEEEEECCC-CceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECC
Confidence 45788878776 89999999987 4444445554422 2347899999988877654 456688875
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.07 E-value=7.6e-06 Score=39.81 Aligned_cols=65 Identities=11% Similarity=0.077 Sum_probs=43.2
Q ss_pred eeecCcEEEEeeCCC------CEEEeecCCCCcceE---EeccCCCCEEEEEEcC---CCCEEEEEeC-CCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDT------TIALWDARNLKTRVR---TLQGHSNWVKNIEFSS---KDNLLVTAGF-DGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~~~~~ 66 (68)
++|+++.++++..+. .+.+|++...+.... ....+......++++| +++.++.++. ++.+.+|++
T Consensus 262 ~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 262 LTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp ECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 678998887776543 799999853133221 1222333445778899 7888877776 489999975
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.06 E-value=1.2e-05 Score=39.31 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=46.2
Q ss_pred CeeecCcEEEEeeC----------CCCEEEeecCCCCcceEEeccC------CCCEEEEEEcCCCCEEEEEeC--CCCEE
Q psy11876 1 MIFLDTRVFATCSD----------DTTIALWDARNLKTRVRTLQGH------SNWVKNIEFSSKDNLLVTAGF--DGSIY 62 (68)
Q Consensus 1 ~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~i~ 62 (68)
+++|+++.++++.. ++.+.+|+..+ ......+... ......++++|+++.+..+.. ++.+.
T Consensus 56 ~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t-~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~ 134 (361)
T 2oiz_A 56 QVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK-LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIG 134 (361)
T ss_dssp EECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT-CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEE
T ss_pred EECCCCCEEEEEEecccccccCCCCCEEEEEECcC-CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEE
Confidence 36789999888863 56799999876 3444444321 234567889999988876653 57899
Q ss_pred EEeCC
Q psy11876 63 TWDIN 67 (68)
Q Consensus 63 ~~~~~ 67 (68)
+||..
T Consensus 135 v~d~~ 139 (361)
T 2oiz_A 135 IVDVA 139 (361)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99875
No 172
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.03 E-value=6.5e-05 Score=37.57 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=38.4
Q ss_pred EEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 9 FATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 9 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++++..||.+.+|++.. .... . ....+.+++|+|++ +..+..|+.+.+|+.
T Consensus 139 ~av~~~dG~L~v~dl~~-~~~~-~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 139 LVILNSVNDLSALDLRT-KSTK-Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAW 189 (388)
T ss_dssp EEEEETTSEEEEEETTT-CCEE-E---EEESEEEEEECSSE--EEEEETTSCEEEEEE
T ss_pred EEEEECCCCEEEEEccC-Cccc-c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcC
Confidence 77788899999999875 2222 1 33468899999988 556778899998864
No 173
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.02 E-value=0.00013 Score=36.55 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=43.9
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+++.++++ .++.+++|+..... .......+...+..+.+.+. .++.++.+|.+.+||+.
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLR 154 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETT
T ss_pred CCCEEEEE-cCCcEEEEEchhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEcc
Confidence 77888888 78999999987633 33345556666777665443 38888999999999985
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.02 E-value=4.7e-05 Score=40.12 Aligned_cols=57 Identities=9% Similarity=0.085 Sum_probs=37.0
Q ss_pred eeecCcEEEEeeCCC-----CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCC
Q psy11876 2 IFLDTRVFATCSDDT-----TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGS 60 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (68)
++||++.++.+..++ .+++|++.. +......... ..+..++|+|+++.++.+..++.
T Consensus 132 ~SPDg~~la~~~~~~G~~~~~i~v~d~~t-g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 132 FSEDGEYFAYGLSASGSDWVTIKFMKVDG-AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp ECTTSSEEEEEEEETTCSCEEEEEEETTT-TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCC
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCC-CCCCcccccC-cccceEEEEeCCCEEEEEEECCc
Confidence 578998887655443 789999876 3332211111 12457899999988887776654
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.00 E-value=4e-05 Score=37.20 Aligned_cols=64 Identities=9% Similarity=-0.012 Sum_probs=41.0
Q ss_pred eeecCcEEEEeeCC-C--CEEEeecCCCCcceEEeccCCCCE-EEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD-T--TIALWDARNLKTRVRTLQGHSNWV-KNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-~--~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.++..... + .+.+|+... .. ........... ....|+|+++.++....++.+.+|+..
T Consensus 43 ~SpdG~~l~~~~~~~g~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 43 FTQDGKKLLFAGDFDGNRNYYLLNLET-QQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTT-TE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred CCCCCCEEEEEEecCCCceEEEEECCC-Cc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence 57899887665443 3 466667655 22 22333222222 236789999999888888889999864
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.93 E-value=0.00024 Score=34.22 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=46.4
Q ss_pred eeecCcEEEEeeCC------------------------CCEEEeecCCCCcceEEec-cCCCCEEEEEEcCCCCEEEEEe
Q psy11876 2 IFLDTRVFATCSDD------------------------TTIALWDARNLKTRVRTLQ-GHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 2 ~~~~~~~~~~~~~~------------------------~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
+.++++++++...+ +.+.+|+..+ ........ .+-.....+++.++++++++..
T Consensus 31 ~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~ 109 (329)
T 3fvz_A 31 LDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN-AEILQSSGKNLFYLPHGLSIDTDGNYWVTDV 109 (329)
T ss_dssp ECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT-CCEEEEECTTTCSSEEEEEECTTSCEEEEET
T ss_pred ECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC-CeEEeccCCCccCCceEEEECCCCCEEEEEC
Confidence 56778877777766 3688888865 33333332 2334678899999999888888
Q ss_pred CCCCEEEEeCC
Q psy11876 57 FDGSIYTWDIN 67 (68)
Q Consensus 57 ~~~~i~~~~~~ 67 (68)
.++.|..|+..
T Consensus 110 ~~~~v~~~~~~ 120 (329)
T 3fvz_A 110 ALHQVFKLDPH 120 (329)
T ss_dssp TTTEEEEECTT
T ss_pred CCCEEEEEeCC
Confidence 88999999853
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.92 E-value=0.00026 Score=36.98 Aligned_cols=64 Identities=17% Similarity=0.129 Sum_probs=46.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecC--CCCcceEEeccCCCCEEEEEEc----CCCCEEEEE-eCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDAR--NLKTRVRTLQGHSNWVKNIEFS----SKDNLLVTA-GFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~i~~~~~~ 67 (68)
++|+++.+++++.++.+.++|.. + ......+.... ....+.++ |+++++..+ ..++.+.++|..
T Consensus 204 ~SpDGr~lyv~~~dg~V~viD~~~~t-~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 204 LSASGRYLFVIGRDGKVNMIDLWMKE-PTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSS-CCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCC-CcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 67899999999999999999985 4 34444554433 35688899 688766554 456888888854
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.91 E-value=3.9e-05 Score=39.82 Aligned_cols=66 Identities=14% Similarity=0.146 Sum_probs=44.8
Q ss_pred eeecCcEEEEeeCC----------CCEEEeecCCCC----cceEEec-cCCCCEEEEEEcCCCCEEEEEeCC--------
Q psy11876 2 IFLDTRVFATCSDD----------TTIALWDARNLK----TRVRTLQ-GHSNWVKNIEFSSKDNLLVTAGFD-------- 58 (68)
Q Consensus 2 ~~~~~~~~~~~~~~----------~~v~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------- 58 (68)
++||++.|+.++.+ ..+.+|+..... .....+. .+...+...+|+|+++.++..+.+
T Consensus 137 ~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 137 LLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp EETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred ECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 57899988888766 467788876410 2333444 445566778899999888766543
Q ss_pred CCEEEEeCC
Q psy11876 59 GSIYTWDIN 67 (68)
Q Consensus 59 ~~i~~~~~~ 67 (68)
..|.+||+.
T Consensus 217 ~~i~~~d~~ 225 (662)
T 3azo_A 217 TELKTARVT 225 (662)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEEC
Confidence 368888764
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.90 E-value=0.00018 Score=34.14 Aligned_cols=59 Identities=10% Similarity=0.051 Sum_probs=44.0
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCC-CCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHS-NWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.++.+++++.++.+.+|+..+ ...+..+..+. ..++.+.+.|+++.+++ .++.+..+|.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~t-G~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~ 63 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDT-KEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR 63 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTT-TEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT
T ss_pred CCcEEEeeCCCCEEEEEECCC-CeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC
Confidence 467899999999999999877 56666665554 35678889999988873 3555666654
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.90 E-value=2.9e-05 Score=40.80 Aligned_cols=63 Identities=8% Similarity=0.063 Sum_probs=42.3
Q ss_pred eeecCcEEE-----EeeCCCCEEEeecCCCCcceEEeccCCCCE--EEEEEcCCCCEEEEEeCCCC-------------E
Q psy11876 2 IFLDTRVFA-----TCSDDTTIALWDARNLKTRVRTLQGHSNWV--KNIEFSSKDNLLVTAGFDGS-------------I 61 (68)
Q Consensus 2 ~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------------i 61 (68)
++||++.++ .|+.+..+++|++.. +.... ..+...+ ..++|+|+++.++..+.+.. +
T Consensus 128 ~SPDG~~la~~~~~~G~~~~~i~v~dl~t-g~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v 204 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAADEAVLHVIDVDS-GEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTI 204 (695)
T ss_dssp ECTTSSEEEEEEEETTCSCCEEEEEETTT-CCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEE
T ss_pred ECCCCCEEEEEECCCCCceEEEEEEECCC-CCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEE
Confidence 678998887 444456899999976 33220 1111112 57889999998888877655 8
Q ss_pred EEEeCC
Q psy11876 62 YTWDIN 67 (68)
Q Consensus 62 ~~~~~~ 67 (68)
.+|++.
T Consensus 205 ~~~~l~ 210 (695)
T 2bkl_A 205 RYHTLG 210 (695)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 888764
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.87 E-value=0.00022 Score=33.48 Aligned_cols=64 Identities=6% Similarity=0.209 Sum_probs=44.7
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec--cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ--GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.++++++++...++.+.+|+... .....+. .+...+..+++.++++.+++...++.+.+|+..
T Consensus 128 ~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 128 VDNKGRIIVVECKVMRVIIFDQNG--NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTS--CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred EeCCCCEEEEECCCCEEEEEcCCC--CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 346777777666678888888643 3333332 333457899999998888888778899999853
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.86 E-value=0.00028 Score=32.73 Aligned_cols=64 Identities=11% Similarity=-0.046 Sum_probs=44.0
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+++..+++...++.+..|+... .........+...+..+++.++++++++...++.|.+++..
T Consensus 200 d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 200 DEAGTVYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CTTCCEEEEETTTSCEEEECTTC-SCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCCCCEEEEECCCCcEEEEcCCC-CcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 45666666666677888888754 22221112223457889999998888888889999999864
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.84 E-value=0.00017 Score=34.60 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=32.7
Q ss_pred eeecCcEEEEeeCC---CC--EEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe
Q psy11876 2 IFLDTRVFATCSDD---TT--IALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (68)
++||++.++..+.+ +. +.+++... .... ....... +..+.|+|+++.++...
T Consensus 66 ~SpDg~~la~~~~~~~~~~~~l~~~~~~~-g~~~-~l~~~~~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 66 ISPDGKKIAFMRANEEKKVSEIWVADLET-LSSK-KILEAKN-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp ECTTSSEEEEEEEETTTTEEEEEEEETTT-TEEE-EEEEESE-EEEEEECTTSSEEEEEE
T ss_pred ECCCCCEEEEEEeccCCCcceEEEEECCC-CceE-EEEcCCC-ccceeECCCCCEEEEEE
Confidence 57899888776643 33 55666654 3322 2222233 78899999998777665
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.61 E-value=0.0015 Score=34.22 Aligned_cols=60 Identities=23% Similarity=0.178 Sum_probs=45.9
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..+++...++.+.++|..+ ...+..+... ..++.+.++|+++.+..++.++.+.++|..
T Consensus 167 ~~~~V~~~~~~~V~viD~~t-~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGST-YEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp GEEEEEETTTTEEEEEETTT-CCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred ceEEEEeCCCCeEEEEECCC-CeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 35667777789999999987 4445455433 346789999999988888889999999973
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.59 E-value=0.0011 Score=31.99 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=45.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEe---------ccCCCCEEEEEEcC-CCCEEEEEe-CCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTL---------QGHSNWVKNIEFSS-KDNLLVTAG-FDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~-~~~~i~~~~~ 66 (68)
+.++++++++...++.|..|+.......+..+ ..+......+++.| ++..+++.+ .++.|.+|+.
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence 45678877777778889988875421133333 22334578999999 788888886 6889999874
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.56 E-value=0.0011 Score=31.32 Aligned_cols=64 Identities=9% Similarity=0.190 Sum_probs=43.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 67 (68)
.+++++.++...++.+..|+..+ ......+..+...+..+++.++++ ++++...++.+..++..
T Consensus 234 d~~G~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 234 DEDNNLLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp BTTCCEEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCEEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 45666666666677888888764 233334444446678899999887 55666666788888754
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.56 E-value=0.0015 Score=34.65 Aligned_cols=65 Identities=8% Similarity=0.055 Sum_probs=43.2
Q ss_pred eeecCcEEEEeeCCCC----------------EEEeecCCCCcc-eEEecc--CCCCEEEEEEcCCCCEEEEEeC-----
Q psy11876 2 IFLDTRVFATCSDDTT----------------IALWDARNLKTR-VRTLQG--HSNWVKNIEFSSKDNLLVTAGF----- 57 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----- 57 (68)
.+||++.|+.++.+.. +.+|++.+.... ...... +........|+|+++.++....
T Consensus 178 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 257 (710)
T 2xdw_A 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDP 257 (710)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSS
T ss_pred EEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCC
Confidence 4678888888777655 888888662211 222332 3445678899999987766543
Q ss_pred CCCEEEEeC
Q psy11876 58 DGSIYTWDI 66 (68)
Q Consensus 58 ~~~i~~~~~ 66 (68)
+..+.+||.
T Consensus 258 ~~~l~~~d~ 266 (710)
T 2xdw_A 258 VNRLWYCDL 266 (710)
T ss_dssp CCEEEEEEG
T ss_pred ccEEEEEEC
Confidence 457888875
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.51 E-value=0.0017 Score=32.22 Aligned_cols=64 Identities=9% Similarity=0.009 Sum_probs=43.0
Q ss_pred CeeecCcEEEEee----------CCCCEEEeecCCCCcceEEeccC-------CCCEEEEEEcCCCCEEEEEeC--CCCE
Q psy11876 1 MIFLDTRVFATCS----------DDTTIALWDARNLKTRVRTLQGH-------SNWVKNIEFSSKDNLLVTAGF--DGSI 61 (68)
Q Consensus 1 ~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~i 61 (68)
+++||++.++.+. .++.+.+++..+ ......+... ......+.++|+++.+...+. +..+
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v 150 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT-FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV 150 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCC-CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeE
Confidence 3688999888886 356788999876 3333333221 122357889999988776654 4778
Q ss_pred EEEe
Q psy11876 62 YTWD 65 (68)
Q Consensus 62 ~~~~ 65 (68)
.++|
T Consensus 151 ~viD 154 (373)
T 2mad_H 151 GLVV 154 (373)
T ss_pred EEEE
Confidence 8887
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.47 E-value=0.0021 Score=34.06 Aligned_cols=64 Identities=14% Similarity=0.051 Sum_probs=41.6
Q ss_pred eeecCcEEEEeeCCCC-------------EEEeecCCCCc-ceEEec--cCCCCEEEEEEcCCCCEEEEEeCCC----CE
Q psy11876 2 IFLDTRVFATCSDDTT-------------IALWDARNLKT-RVRTLQ--GHSNWVKNIEFSSKDNLLVTAGFDG----SI 61 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~-------------v~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~i 61 (68)
.+||++.|+.++.+.. +++|++.+... ...... .+...+....|+|+++.++..+.++ .+
T Consensus 175 wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l 254 (695)
T 2bkl_A 175 WTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDV 254 (695)
T ss_dssp ECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEE
T ss_pred EecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEE
Confidence 4688888888887765 89999876221 122232 3445677889999987766555443 45
Q ss_pred EEEe
Q psy11876 62 YTWD 65 (68)
Q Consensus 62 ~~~~ 65 (68)
.+++
T Consensus 255 ~~~~ 258 (695)
T 2bkl_A 255 YWKR 258 (695)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5554
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.46 E-value=0.0017 Score=30.72 Aligned_cols=64 Identities=3% Similarity=0.011 Sum_probs=41.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcc---eEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTR---VRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.+++...++.+.+|+....... ...+......+..+++.++++++++. ++.|.+|+..
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 4678887776777788999988621222 12222233445678888988877766 7778888753
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.45 E-value=0.0015 Score=30.25 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=42.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.++++++++...++.+..|+... .............+..+++.+++.++++...++.+.+|+..
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eCCCCEEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 45666666555567888888764 22221112222556788999988888888778899998754
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.44 E-value=0.00042 Score=34.79 Aligned_cols=66 Identities=11% Similarity=0.111 Sum_probs=44.9
Q ss_pred eeecCcEEEEee----------CCCCEEEeecCCCCcceEEeccC-------CCCEEEEEEcCCCCEEEEEeC--CCCEE
Q psy11876 2 IFLDTRVFATCS----------DDTTIALWDARNLKTRVRTLQGH-------SNWVKNIEFSSKDNLLVTAGF--DGSIY 62 (68)
Q Consensus 2 ~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~i~ 62 (68)
++|+++.++.+. .++.+.+||..+ ......+... ......+.++|+++.+..... ++.+.
T Consensus 85 ~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t-~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~Vs 163 (386)
T 3sjl_D 85 VADDGSFIAHASTVFSRIARGERTDYVEVFDPVT-LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVG 163 (386)
T ss_dssp ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEE
T ss_pred ECCCCCEEEEEcccccccccCCCCCEEEEEECCC-CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEE
Confidence 678998887765 356799999987 4444444321 113457889999987766653 67899
Q ss_pred EEeCCC
Q psy11876 63 TWDINK 68 (68)
Q Consensus 63 ~~~~~~ 68 (68)
++|..+
T Consensus 164 VID~~t 169 (386)
T 3sjl_D 164 VVDLEG 169 (386)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 998753
No 193
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.42 E-value=0.00039 Score=34.25 Aligned_cols=60 Identities=17% Similarity=0.184 Sum_probs=36.9
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++..+++++.|+.+..|+..+ +........ ..+.......++..++.++.++.+..||..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t-G~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT-GSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT-CCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC---
T ss_pred eCCEEEEEcCCCEEEEEECCC-CCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECC
Confidence 567889999999999999877 444444443 223232333456667777789999999863
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.37 E-value=0.0028 Score=31.45 Aligned_cols=64 Identities=6% Similarity=-0.031 Sum_probs=42.5
Q ss_pred eecCcEEEEeeC----------CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEe-CCCCEEEEeCCC
Q psy11876 3 FLDTRVFATCSD----------DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAG-FDGSIYTWDINK 68 (68)
Q Consensus 3 ~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~ 68 (68)
+++++.++.+.. .+.+.+.|..+ ...+..+.. ......+.++++++ .+..+. .++.+.++|..+
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 455666655443 24688888876 444445543 23468999999987 666666 589999999753
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.33 E-value=0.0024 Score=32.16 Aligned_cols=63 Identities=11% Similarity=-0.000 Sum_probs=44.2
Q ss_pred eeecCcEEEEeeC-----CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe----------CCCCEEEEeC
Q psy11876 2 IFLDTRVFATCSD-----DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG----------FDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~ 66 (68)
..|+++.++.... ++.+.+.|..+ ...+..+.....+ . +.++|+++.+..+. .++.+.+||.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t-~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEA-GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTT-TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCC-CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 3578888888876 56888999887 4555666555554 4 89999987554443 3567899986
Q ss_pred C
Q psy11876 67 N 67 (68)
Q Consensus 67 ~ 67 (68)
.
T Consensus 117 ~ 117 (386)
T 3sjl_D 117 V 117 (386)
T ss_dssp T
T ss_pred C
Confidence 5
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.19 E-value=0.0044 Score=30.00 Aligned_cols=61 Identities=18% Similarity=0.159 Sum_probs=41.8
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++..+++...++.+.+++..+ ......+. .......++++++++.+++...++.+.++|..
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t-~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~ 113 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINT-FKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPK 113 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTT-CCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETT
T ss_pred CCEEEEEEcCCCEEEEEECcc-cEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECC
Confidence 344555555568899999987 44444553 23456788888887666666578999999875
No 197
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.11 E-value=0.0057 Score=29.81 Aligned_cols=52 Identities=17% Similarity=0.089 Sum_probs=34.6
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEE--EcCCCCEEEE
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIE--FSSKDNLLVT 54 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 54 (68)
++|+++.|+.++.+..+.+|++.. .........+...+.... .++++..++.
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLAT-LEENVVYQVPAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTT-CCEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC-CcceeeeechhhcccccceeECCCCCeecc
Confidence 578999999999888999999987 333333333444333333 4777777653
No 198
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.07 E-value=0.0044 Score=30.15 Aligned_cols=62 Identities=16% Similarity=0.081 Sum_probs=36.3
Q ss_pred eeecCcEEEEeeCC-----CCEEEeecCCCCcceEEeccCCCCEEEEEEcC-CCCEEEEEe----------------CCC
Q psy11876 2 IFLDTRVFATCSDD-----TTIALWDARNLKTRVRTLQGHSNWVKNIEFSS-KDNLLVTAG----------------FDG 59 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------------~~~ 59 (68)
++|+++.++..+.+ +.+.+|+... .... ....... .. ..|+| +++.++... .+.
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~-~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPET-LENE-EVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTT-CCEE-EEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCC-CCeE-EeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 56788766555433 3388888865 2222 1211111 23 78899 888777644 236
Q ss_pred CEEEEeCC
Q psy11876 60 SIYTWDIN 67 (68)
Q Consensus 60 ~i~~~~~~ 67 (68)
.+.+||..
T Consensus 321 ~i~~~d~~ 328 (396)
T 3c5m_A 321 FLYVLNTK 328 (396)
T ss_dssp EEEEEETT
T ss_pred cEEEEecc
Confidence 78888864
No 199
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.98 E-value=0.0065 Score=29.20 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=36.2
Q ss_pred eecCcEEEEeeCC--------CCEEEeecCCCCcceEEeccCCCCEEE-EEEcCCCCEEEEEeCCCCEEEE
Q psy11876 3 FLDTRVFATCSDD--------TTIALWDARNLKTRVRTLQGHSNWVKN-IEFSSKDNLLVTAGFDGSIYTW 64 (68)
Q Consensus 3 ~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~ 64 (68)
+|+++.++..+.+ ..+.+|+ . .........+...+.. ..|+ ++ .++++..++...+|
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence 6788877666643 2455666 2 3222222334555665 7888 77 88888888888888
No 200
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.96 E-value=0.00044 Score=34.40 Aligned_cols=64 Identities=13% Similarity=-0.006 Sum_probs=43.4
Q ss_pred eeecCcEEEEee----------CCCCEEEeecCCCCcceEEeccC-------CCCEEEEEEcCCCCEEEEEeC--CCCEE
Q psy11876 2 IFLDTRVFATCS----------DDTTIALWDARNLKTRVRTLQGH-------SNWVKNIEFSSKDNLLVTAGF--DGSIY 62 (68)
Q Consensus 2 ~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~i~ 62 (68)
++|+++.++.+. .++.+.++|..+ ......+... ......+.++|+++++..+.. +..+.
T Consensus 72 ~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T-~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~ 150 (368)
T 1mda_H 72 AGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT-FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAG 150 (368)
T ss_dssp ECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT-CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEE
T ss_pred ECCCCCEEEEEcccccccccCCCCCEEEEEECCC-CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEE
Confidence 678888888876 367899999988 4555555322 122467889999877766654 35577
Q ss_pred E--EeC
Q psy11876 63 T--WDI 66 (68)
Q Consensus 63 ~--~~~ 66 (68)
+ +|.
T Consensus 151 V~~iD~ 156 (368)
T 1mda_H 151 LSVPGA 156 (368)
T ss_dssp EEETTT
T ss_pred EEEEch
Confidence 7 665
No 201
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.94 E-value=0.01 Score=29.73 Aligned_cols=65 Identities=6% Similarity=-0.112 Sum_probs=42.7
Q ss_pred eeecCcEEEEeeC---------CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEe-CCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSD---------DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAG-FDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~ 68 (68)
++++++.++.+.. +..+.++|..+ ...+..+.... ....+.++++++ .+.+.. .++.+.++|..+
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 4567766665432 13456899877 34444443322 467899999875 667777 589999999753
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.94 E-value=0.01 Score=30.34 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=43.4
Q ss_pred eeecCcEEEEeeC----------CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCC-EEEEEe-CCCCEEEEeCCC
Q psy11876 2 IFLDTRVFATCSD----------DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDN-LLVTAG-FDGSIYTWDINK 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~ 68 (68)
++++++.++.... .+.+.+.|..+ ...+..+... .....+.++++++ .+.+.. .++.+.++|..+
T Consensus 326 ~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 326 YHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred EcCCCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 3556666655532 24688888877 4444445432 2467889999987 777666 589999999753
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.87 E-value=0.0033 Score=33.62 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=33.3
Q ss_pred eeecCcEEEEeeCC-C----CEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCC
Q psy11876 2 IFLDTRVFATCSDD-T----TIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDG 59 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (68)
++||++.++.+..+ | .+++|++.. +.... .......+..++|+|+ +.++....+.
T Consensus 170 ~SPDG~~la~~~~~~G~e~~~i~v~dl~t-g~~~~-~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 170 ASDDGRLLAYSVQDGGSDWRTVKFVGVAD-GKPLA-DELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp ECTTSSEEEEEEEETTCSEEEEEEEETTT-CCEEE-EEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCC-CCCCC-ccCCCceeccEEEECC-CEEEEEEecC
Confidence 57899887766543 3 588999876 33222 1111111246789999 8777666544
No 204
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.77 E-value=0.0016 Score=31.16 Aligned_cols=59 Identities=8% Similarity=0.205 Sum_probs=36.8
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++..++....++.++.|. ......+..+...+..++|.++++++++...++.|.+||..
T Consensus 16 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~ 74 (333)
T 2dg1_A 16 KSNSAVPIISESELQTIT----AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE 74 (333)
T ss_dssp GGGCSSCCCCGGGSCEEE----CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CccceeEEeecccCcccc----cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCC
Confidence 333333334455555552 22233444455566788899988887787778889888764
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.74 E-value=0.012 Score=27.96 Aligned_cols=62 Identities=6% Similarity=0.011 Sum_probs=44.1
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.++++.+++...++.+..|+.. ...+..+... .........++++.+++...++.+..+|..
T Consensus 133 ~~~G~~lv~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 133 NKKGNYLVPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp CTTSCEEEEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CCCCCEEEEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 4578888888888999998875 4445455433 334556677888888888777778877754
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.69 E-value=0.013 Score=27.44 Aligned_cols=63 Identities=16% Similarity=0.026 Sum_probs=39.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.++++..++...++.+..|+.. ..............+..+++.+++..+++...++.+..|+.
T Consensus 23 d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 23 SDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECC
Confidence 3456655555546778888765 22222122223456788888888888887766777877764
No 207
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.67 E-value=0.015 Score=28.14 Aligned_cols=63 Identities=10% Similarity=0.193 Sum_probs=39.4
Q ss_pred eeecCcEEEEeeCC----------CCEEEeecCCCCcceEEeccC-CCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD----------TTIALWDARNLKTRVRTLQGH-SNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++++++++..+ +.+.+++..+ ......+... ......++++|++..+..... .+.++|..
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 34567766665543 6788888876 3333333321 235688999998776665543 78888764
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.64 E-value=0.015 Score=27.68 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=41.3
Q ss_pred eeecCcEEE-EeeCCCCEEEeecC-CCCcc-----eEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFA-TCSDDTTIALWDAR-NLKTR-----VRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~-~~~~~~~v~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++|+++.++ +...++.|..|+.. ..... ...+.........+++.++++++++...++.|..|+..
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 467776554 44456778888763 11211 11122223456788888888888888777888888764
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.39 E-value=0.024 Score=27.07 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=41.6
Q ss_pred eeecCc-EEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTR-VFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
..++++ ++++...++.+..|+... . ...+......+..+.+.++++++++...++.+..++.
T Consensus 52 ~~~~g~~l~~~d~~~~~i~~~~~~g-~--~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 52 WWEAQRTLVWSDLVGRRVLGWREDG-T--VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEGGGTEEEEEETTTTEEEEEETTS-C--EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCC-C--EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 356776 567777778888887632 2 2334344556788899999987777655567777764
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.29 E-value=0.026 Score=26.39 Aligned_cols=63 Identities=10% Similarity=-0.121 Sum_probs=39.0
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
.++++..++...++.+..++. ...............+..+.+.++++.+++...++.+..++.
T Consensus 191 ~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 191 GNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 345665555545667787877 422211112223456788889888887777666777888775
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.29 E-value=0.048 Score=29.41 Aligned_cols=64 Identities=6% Similarity=-0.007 Sum_probs=38.4
Q ss_pred eeecCcEEEEeeCCCC--------------EEEeecCCCCc-ceEEecc--CCCCEEEEEEcCCCCEEEEEeCC-----C
Q psy11876 2 IFLDTRVFATCSDDTT--------------IALWDARNLKT-RVRTLQG--HSNWVKNIEFSSKDNLLVTAGFD-----G 59 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~--------------v~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~ 59 (68)
.+|| +.|+.+..+.. +.+|+..+... ....... +...+....|+|+++.++....+ .
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 294 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVN 294 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCC
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcc
Confidence 3567 66766665543 77777755221 1223332 22347788999999877655533 3
Q ss_pred CEEEEeC
Q psy11876 60 SIYTWDI 66 (68)
Q Consensus 60 ~i~~~~~ 66 (68)
.+.+||.
T Consensus 295 ~l~~~d~ 301 (741)
T 1yr2_A 295 TVHVARV 301 (741)
T ss_dssp EEEEEEE
T ss_pred eEEEEEC
Confidence 6777775
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.15 E-value=0.01 Score=31.69 Aligned_cols=53 Identities=23% Similarity=0.264 Sum_probs=31.2
Q ss_pred eeecCcEEEE-----eeCCCCEEEeecCCCCcceE-EeccCCCCEEEEEEcCCCCEEEEEeCC
Q psy11876 2 IFLDTRVFAT-----CSDDTTIALWDARNLKTRVR-TLQGHSNWVKNIEFSSKDNLLVTAGFD 58 (68)
Q Consensus 2 ~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (68)
++||++.++- |+....++++++.+ +.... ..... ....++|+ +++.++....+
T Consensus 136 ~SpDg~~lAy~~~~~G~~~~~i~v~dl~t-g~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 136 FSRDGRILAYSLSLAGSDWREIHLMDVES-KQPLETPLKDV--KFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEEEETTT-CSEEEEEEEEE--ESCCCEEE-TTTEEEEEESS
T ss_pred ECCCCCEEEEEEecCCCceEEEEEEECCC-CCCCccccCCc--eeccEEEe-CCCEEEEEEec
Confidence 5788887763 33335688899877 33221 11111 12456788 88877766655
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.05 E-value=0.037 Score=25.90 Aligned_cols=62 Identities=16% Similarity=0.055 Sum_probs=38.4
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++++..++...++.+..++.. ..............+..+.+.+++..+++...++.+..+|.
T Consensus 29 ~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 29 EDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 456655555556778888765 22222122223356778888888887777766677777764
No 214
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.02 E-value=0.069 Score=28.76 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=44.3
Q ss_pred eeecCcEE-EEeeCCCCEEEeecCCCC----------cceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVF-ATCSDDTTIALWDARNLK----------TRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++||++++ +++..+..+.+++..+.. ..+.....-......++|++++..+.+.-.++++..|++
T Consensus 284 ~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 284 MAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp ECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred EcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 57888755 555566889999987421 011111223345688899999966677888999999985
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.02 E-value=0.052 Score=27.37 Aligned_cols=61 Identities=16% Similarity=0.260 Sum_probs=37.4
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCC--CEEEEe
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDG--SIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~ 65 (68)
+.++++++++...++.|+.|+... ......... ..... +++.+++..+.....++ .+..++
T Consensus 138 ~d~~g~lyv~d~~~~~I~~id~~~-g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 138 AVGNNTVLAYQRDDPRVRLISVDD-NKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp ECSTTEEEEEETTTTEEEEEETTT-TEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEE
T ss_pred EeCCCCEEEEecCCCcEEEEECCC-CEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEE
Confidence 345677666666668888888865 332222332 22234 88899888777776654 566655
No 216
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.90 E-value=0.047 Score=25.84 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=40.2
Q ss_pred ecCcEEEEe-eCCCCEEEeecCCCCc-----ceEEeccCC-CCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATC-SDDTTIALWDARNLKT-----RVRTLQGHS-NWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~-~~~~~v~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
++++.++.+ ..++.+..|+...... ....+..+. .....+++.++++.+++...++.+..|+..
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 666555444 4567888888642121 111222222 446788889999888887778889888864
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.69 E-value=0.082 Score=27.16 Aligned_cols=61 Identities=11% Similarity=-0.012 Sum_probs=40.9
Q ss_pred ecCcEEEEeeCC-----CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe----------CCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDD-----TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG----------FDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~ 67 (68)
+++..++..... +.+.++|..+ ...+..+.....+ .+.++|+++.+..+. .++.+.++|..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t-~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGST-GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTT-TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCC-CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 456666666553 5888999887 4556666555555 789999986554443 35678888864
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.54 E-value=0.066 Score=25.03 Aligned_cols=62 Identities=10% Similarity=-0.061 Sum_probs=37.0
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++++..++...++.+..++... .............+..+++.++++++++...++.+..++.
T Consensus 71 ~~g~l~v~~~~~~~v~~~d~~g-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 71 SLGDIWFTENGANKIGKLSKKG-GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTTS-CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCCEEEEecCCCeEEEECCCC-CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECC
Confidence 4555555554456677776652 2221222223355778888888888877766677777664
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.97 E-value=0.042 Score=26.81 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=22.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 39 WVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
....+++.++++++++...++.|.+|+.
T Consensus 249 ~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 249 ICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp SCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 3456788888888888888889999986
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.81 E-value=0.17 Score=25.60 Aligned_cols=63 Identities=13% Similarity=0.231 Sum_probs=41.4
Q ss_pred eeecCcEEEEee-CCCCEEEeecCCCCcceEEeccC---------------CCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 2 IFLDTRVFATCS-DDTTIALWDARNLKTRVRTLQGH---------------SNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 2 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
+.++++++++-. .++.|+.|+... .. +..+.++ -.....+++.+++.++++-..++.|+.++
T Consensus 330 ~d~dG~lyvad~~~~~~I~~~~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 330 VDEDGNFYIVDGFKGYCLRKLDILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp ECTTCCEEEEETTTTCEEEEEETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred EeCCCCEEEEeCCCCCEEEEEECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 456677666655 677888888544 22 2222222 23468899999888888888888888765
Q ss_pred C
Q psy11876 66 I 66 (68)
Q Consensus 66 ~ 66 (68)
+
T Consensus 408 ~ 408 (409)
T 3hrp_A 408 V 408 (409)
T ss_dssp E
T ss_pred e
Confidence 4
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.81 E-value=0.18 Score=27.36 Aligned_cols=51 Identities=14% Similarity=0.277 Sum_probs=31.2
Q ss_pred CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 16 TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.+..||..+ .+..-....+. ......+...+.+++.++.|+.++.||.++
T Consensus 455 g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 455 GKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp EEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred eeEEEEECCC-CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCC
Confidence 5577777766 44333333222 122223445667888889999999999763
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.79 E-value=0.13 Score=27.78 Aligned_cols=51 Identities=12% Similarity=0.274 Sum_probs=30.2
Q ss_pred CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 16 TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 16 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+.+..||..+ .+..-... +........+...+..++.++.++.+.+||.++
T Consensus 457 g~l~A~D~~t-G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 457 GRLLAWDPVA-QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp EEEEEEETTT-TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cEEEEEeCCC-CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 4566777766 33333332 222223333445666777788899999998753
No 223
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.40 E-value=0.25 Score=25.87 Aligned_cols=65 Identities=17% Similarity=0.146 Sum_probs=44.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCC---c--------ceEEecc------CCCCEEEEEEcCC---CCEEEEEeCCCCE
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLK---T--------RVRTLQG------HSNWVKNIEFSSK---DNLLVTAGFDGSI 61 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~---~--------~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~i 61 (68)
++|+|.++|..+. ..+.+..+.... . ....+.. ...+|..+.|+|- +..++....|+.|
T Consensus 73 lSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~I 151 (452)
T 3pbp_A 73 SSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTI 151 (452)
T ss_dssp ECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCE
T ss_pred ECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEE
Confidence 5788888888775 467776665211 0 1112221 1457899999994 4588899999999
Q ss_pred EEEeCC
Q psy11876 62 YTWDIN 67 (68)
Q Consensus 62 ~~~~~~ 67 (68)
++||+.
T Consensus 152 r~yDl~ 157 (452)
T 3pbp_A 152 TMFDIL 157 (452)
T ss_dssp EEEETT
T ss_pred EEEEcc
Confidence 999986
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.09 E-value=0.0049 Score=30.47 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=24.7
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+..+++++.++.+..|+..+ +.....+..+. ....+|.+..+..++.++.+..||.+
T Consensus 92 ~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~ 148 (369)
T 2hz6_A 92 DGILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTK 148 (369)
T ss_dssp ---CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSS
T ss_pred CCEEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECC
Confidence 44566777778888888876 33333332221 12344566667777777888888764
No 225
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.07 E-value=0.21 Score=23.79 Aligned_cols=53 Identities=13% Similarity=0.229 Sum_probs=33.4
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEc-CCCC-EEEEEe
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFS-SKDN-LLVTAG 56 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 56 (68)
.+++++.++...++.|..|+..+ ......+......+.+++|. |++. ++++..
T Consensus 207 d~~G~lwva~~~~~~v~~~d~~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 207 DAEGKLWVACYNGGRVIRLDPVT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BTTSCEEEEEETTTEEEEECTTT-CCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCEEEEEcCCCEEEEEcCCC-ceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 45666666666667788888765 44455555555667888997 6654 444443
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=93.76 E-value=0.28 Score=23.99 Aligned_cols=55 Identities=13% Similarity=0.237 Sum_probs=35.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEec-cCCCCEEEEEEcCCCCEEEEEeC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQ-GHSNWVKNIEFSSKDNLLVTAGF 57 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 57 (68)
+.++++++++...++.|..|+... ........ ........+++.++++++++...
T Consensus 255 ~d~~G~l~va~~~~~~V~~~d~~~-G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 255 IDKDHNIYVGDLAHSAIGVITSAD-RAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp ECTTCCEEEEEGGGTEEEEEETTT-TEEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred ECCCCCEEEEccCCCeEEEEECCC-CCEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 345677777777788899998833 22222222 12345678899888887777653
No 227
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.77 E-value=0.61 Score=25.11 Aligned_cols=64 Identities=8% Similarity=0.031 Sum_probs=36.4
Q ss_pred ecCcEEEEeeC-CCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEe-CC-----CCEEEEeCC
Q psy11876 4 LDTRVFATCSD-DTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAG-FD-----GSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~i~~~~~~ 67 (68)
.++.+++.|+. +..+.+|+..+..+....-......-+.....++++.++.++ .+ ..+.+||..
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 56788888874 356888887653221111111122223445556778888777 33 457788764
No 228
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.53 E-value=0.51 Score=26.86 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=23.8
Q ss_pred CEEEEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 39 WVKNIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
.+.++...++...+.+.+.|+++++|++.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t 266 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST 266 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCC
Confidence 345666667778999999999999998753
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=91.75 E-value=0.8 Score=24.18 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=34.7
Q ss_pred eeecCcEEEEeeCC-CCEEEeecCCCC--cceEEeccC-C-------------CCEEEEEEcCCCCEEEEEe
Q psy11876 2 IFLDTRVFATCSDD-TTIALWDARNLK--TRVRTLQGH-S-------------NWVKNIEFSSKDNLLVTAG 56 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-~~v~~~~~~~~~--~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~ 56 (68)
+++|+++++++... +.|.++++.... ......... . .....+.++++++.+....
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 67889888777764 788899975322 222222221 0 1246788999987776665
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.75 E-value=0.59 Score=22.63 Aligned_cols=64 Identities=8% Similarity=0.094 Sum_probs=38.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC-----CEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN-----WVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++..++.+..++.+.+.|..+ ......+..... ....+.+. ++..++..-.++.+.+-|..
T Consensus 112 lt~Dg~~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 112 LATDGKILYGSDGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp EEECSSSEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred EEECCCEEEEECCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC
Confidence 456776666666678888888876 333434432211 23455665 55566666556777776654
No 231
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.64 E-value=0.74 Score=23.59 Aligned_cols=61 Identities=13% Similarity=0.196 Sum_probs=33.7
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEe-ccCCCCEEEEEEcCCCC-EEEEEeCCCCEEEEeC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTL-QGHSNWVKNIEFSSKDN-LLVTAGFDGSIYTWDI 66 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~ 66 (68)
++.++++-..++.|..++... ....... .........++++|+++ ++++-...+.|..+++
T Consensus 237 ~g~lyv~d~~~~~V~~~~~~~-~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 237 NGELYFNSWNAGQVFRYDFTT-QETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp TCCEEEEETTTTEEEEEETTT-TEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCC-CcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 344444444456666666654 2211111 11223457889999987 5566666677777653
No 232
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.61 E-value=0.9 Score=24.49 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=36.3
Q ss_pred cCcEEEEeeCCC-----------CEEEeecCCCCcce-EEec-cCCCCEEEEEEcCCCCEEEEEeC-CCCEEEEeCC
Q psy11876 5 DTRVFATCSDDT-----------TIALWDARNLKTRV-RTLQ-GHSNWVKNIEFSSKDNLLVTAGF-DGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~-----------~v~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 67 (68)
++.+++.|+.+. .+.+|+..+..... .... .+.......++..++++++.++. +..+.+||..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~ 273 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSS 273 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCc
Confidence 667777776543 35667776533221 1221 12222334566678888888874 4578888753
No 233
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=91.58 E-value=0.63 Score=22.62 Aligned_cols=64 Identities=6% Similarity=-0.051 Sum_probs=38.7
Q ss_pred eeecCcEEEEe-eCCCCEEEeecC--CCC-c-----ceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVFATC-SDDTTIALWDAR--NLK-T-----RVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~-~~~~~v~~~~~~--~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++++++.++.+ ..++.+.+|+.. . . . ....+.........+.+.+++.++++...++.|..|+.
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~-Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDART-GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTT-CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EcCCCCEEEEEECCCCEEEEEEccccc-CCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 45677665444 445778888875 2 2 1 11112222334567788888887777766677888775
No 234
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.40 E-value=0.63 Score=22.28 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=19.4
Q ss_pred CCEEEEEEcCCCCEEEEEeCC------CCEEEEeC
Q psy11876 38 NWVKNIEFSSKDNLLVTAGFD------GSIYTWDI 66 (68)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~ 66 (68)
.....++++|+++.+...... +.+..|++
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEE
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEe
Confidence 345788999998755544433 57777764
No 235
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.98 E-value=1.5 Score=24.23 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=43.6
Q ss_pred eeecCcEE-EEeeCCCCEEEeecCCC-----------CcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 2 IFLDTRVF-ATCSDDTTIALWDARNL-----------KTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~-~~~~~~~~v~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
++|||.++ +.+..+..+.+++.... ...+.....-.......+|.+++....+.-.|+++.-|++
T Consensus 330 vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 330 TSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp ECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred eCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 46787654 66777788999988631 0111111122345577889998877788888999999985
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.02 E-value=1.2 Score=21.65 Aligned_cols=58 Identities=9% Similarity=0.149 Sum_probs=32.2
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
....+...++.+.++|..+ ...+..+......-..+ ++++..+..+..++.+.+.|..
T Consensus 77 ~lyv~t~~~~~v~viD~~t-~~v~~~i~~g~~~g~gl--t~Dg~~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRT-LSNIKNFTHQMKDGWGL--ATDGKILYGSDGTSILYEIDPH 134 (266)
T ss_dssp EEEEEETTCSEEEEEETTT-TEEEEEEECCSSSCCEE--EECSSSEEEECSSSEEEEECTT
T ss_pred EEEEEEecCCEEEEEECCC-CcEEEEEECCCCCeEEE--EECCCEEEEECCCCeEEEEECC
Confidence 3444455567888899876 44444553221112333 4455434444467888888864
No 237
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.29 E-value=0.58 Score=27.10 Aligned_cols=27 Identities=26% Similarity=0.347 Sum_probs=21.2
Q ss_pred EEEEcCCCCEEEEEeCCCCEEEEeCCC
Q psy11876 42 NIEFSSKDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~i~~~~~~~ 68 (68)
++...++...+++.+.|+++++|++.+
T Consensus 242 s~~~~~~~~~lftL~~D~~LRiWsl~t 268 (1139)
T 4fhn_B 242 SMIFLSTYNVLVMLSLDYKLKVLDLST 268 (1139)
T ss_dssp CCEEETTTTEEEEEBTTCEEEEEETTT
T ss_pred EeeccCCccEEEEEeCCCEEEEEECCC
Confidence 334455677899999999999999753
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=88.01 E-value=2.1 Score=23.47 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=31.4
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC-CEEEEEEcCCCCEE
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN-WVKNIEFSSKDNLL 52 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 52 (68)
...+..++.++.|+.++.||..+ ...+..+..... ...-+.+..+++.+
T Consensus 483 ~tagglvf~gt~dg~l~a~D~~t-G~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 483 STAGNLVFEGSADGRVIAYAADT-GEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp EETTTEEEEECTTSEEEEEETTT-CCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred eECCCEEEEECCCCcEEEEECCC-CccceeeeCCCCcccCceEEEECCEEE
Confidence 34567888899999999999988 555555543322 11234455566443
No 239
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=85.51 E-value=3 Score=22.74 Aligned_cols=63 Identities=13% Similarity=0.159 Sum_probs=36.4
Q ss_pred cCcEEEEeeCCCC-------------EEEeecCCCCc-ceEEecc---CCCCEEEEEEcCCCCEEEE-EeC---CCCEEE
Q psy11876 5 DTRVFATCSDDTT-------------IALWDARNLKT-RVRTLQG---HSNWVKNIEFSSKDNLLVT-AGF---DGSIYT 63 (68)
Q Consensus 5 ~~~~~~~~~~~~~-------------v~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~---~~~i~~ 63 (68)
|++.|+.++.+.. +++|++.+... ....... +........++|+++.++. ... .+.+.+
T Consensus 184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV 263 (693)
T ss_dssp TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence 6776766665533 77777765221 1223322 2334667889999876643 332 247778
Q ss_pred EeCC
Q psy11876 64 WDIN 67 (68)
Q Consensus 64 ~~~~ 67 (68)
+++.
T Consensus 264 ~d~~ 267 (693)
T 3iuj_A 264 KDLS 267 (693)
T ss_dssp EETT
T ss_pred EECC
Confidence 7753
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=85.34 E-value=2.9 Score=22.42 Aligned_cols=20 Identities=30% Similarity=0.351 Sum_probs=14.7
Q ss_pred CCCEEEEEeCCCCEEEEeCC
Q psy11876 48 KDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 48 ~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+..+..++.++.+..+|.+
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp TTTEEEEECTTSEEEEEETT
T ss_pred CCCEEEEEcCCCeEEEEECC
Confidence 34556667888999998865
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=84.57 E-value=2.4 Score=20.69 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=34.5
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCC-----CCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHS-----NWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++..++.+.....+.++|..+ ......+.... ..++-+.+. +++.++..-.+..|.+-|..
T Consensus 132 lt~dg~~L~~SdGs~~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 132 LTHNDQYLIMSDGTPVLRFLDPES-LTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp EEECSSCEEECCSSSEEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTT
T ss_pred EecCCCEEEEECCCCeEEEEcCCC-CeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECC
Confidence 345666676666566777777766 33333333211 122334554 45555555556666666553
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=84.48 E-value=2.3 Score=20.46 Aligned_cols=57 Identities=12% Similarity=-0.008 Sum_probs=32.8
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
........++.+.++|..+ ...+..+.... .-+.++. ++..+..+..++.+.++|..
T Consensus 76 ~ly~ltw~~~~v~v~D~~t-l~~~~ti~~~~-~Gwglt~--dg~~L~vSdgs~~l~~iDp~ 132 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLAT-LTPRARFRYPG-EGWALTS--DDSHLYMSDGTAVIRKLDPD 132 (243)
T ss_dssp EEEEEESSSSEEEEEETTT-TEEEEEEECSS-CCCEEEE--CSSCEEEECSSSEEEEECTT
T ss_pred EEEEEEeeCCEEEEEECCc-CcEEEEEeCCC-CceEEee--CCCEEEEECCCCeEEEEeCC
Confidence 3444455667888899877 44455554322 2244443 44434444457889888865
No 243
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=84.42 E-value=3.9 Score=23.13 Aligned_cols=21 Identities=14% Similarity=0.449 Sum_probs=18.3
Q ss_pred CCCEEEEEeCCCCEEEEeCCC
Q psy11876 48 KDNLLVTAGFDGSIYTWDINK 68 (68)
Q Consensus 48 ~~~~~~~~~~~~~i~~~~~~~ 68 (68)
+...+++.+.|.++++|++.+
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t 250 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTS 250 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEEcCCeEEEEEcCC
Confidence 467899999999999999864
No 244
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=84.24 E-value=2.5 Score=20.60 Aligned_cols=52 Identities=10% Similarity=0.137 Sum_probs=29.8
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEc-CCCCEE-EEEeC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFS-SKDNLL-VTAGF 57 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~ 57 (68)
+++++.++...++.+..|+.. ......+......+.++++. +++..+ ++...
T Consensus 239 ~~G~lwva~~~~~~v~~~d~~--g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 239 AEGHIWNARWGEGAVDRYDTD--GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TTSCEEEEEETTTEEEEECTT--CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCEEEEEeCCCEEEEECCC--CCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 355555555445667777763 33344444445567888887 765544 44433
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=81.79 E-value=3.3 Score=20.32 Aligned_cols=64 Identities=8% Similarity=0.093 Sum_probs=36.2
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCC-----CEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSN-----WVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++..++.+..++.+.++|..+ ......+..... .+.-+.|. +++.++..-.+..|.+-|..
T Consensus 141 Lt~Dg~~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 141 LCYWNGKLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp EEEETTEEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred EecCCCEEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 346677777777677888888776 333433333221 22344554 45555555556666666554
No 246
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.27 E-value=4.4 Score=23.84 Aligned_cols=22 Identities=18% Similarity=0.125 Sum_probs=18.8
Q ss_pred ecCcEEEEeeCCCCEEEeecCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~ 25 (68)
++..++++-+.|+.+++|+..+
T Consensus 247 ~~~~~lftL~~D~~LRiWsl~t 268 (1139)
T 4fhn_B 247 STYNVLVMLSLDYKLKVLDLST 268 (1139)
T ss_dssp TTTTEEEEEBTTCEEEEEETTT
T ss_pred CCccEEEEEeCCCEEEEEECCC
Confidence 3567888999999999999876
No 247
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.63 E-value=5 Score=23.20 Aligned_cols=22 Identities=18% Similarity=0.125 Sum_probs=18.7
Q ss_pred ecCcEEEEeeCCCCEEEeecCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~ 25 (68)
++..++++-+.|+.+++|+..+
T Consensus 245 ~~~~~lftl~~D~~LRiWsl~t 266 (950)
T 4gq2_M 245 STYNVLVMLSLDYKLKVLDLST 266 (950)
T ss_dssp TTTTEEEEEETTCEEEEEETTT
T ss_pred CCCcEEEEEECCCEEEEEECCC
Confidence 3556888999999999999876
No 248
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=77.40 E-value=5.8 Score=20.53 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=18.5
Q ss_pred EEEEEcCCCC-EEEEEeCCCCEEEEeC
Q psy11876 41 KNIEFSSKDN-LLVTAGFDGSIYTWDI 66 (68)
Q Consensus 41 ~~~~~~~~~~-~~~~~~~~~~i~~~~~ 66 (68)
..++++|++. ++++-...+.|..+++
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 4688999887 5566666677877653
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=77.23 E-value=7.2 Score=21.52 Aligned_cols=49 Identities=6% Similarity=0.009 Sum_probs=30.6
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCC-CCEEEEEEcCCCCEE
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHS-NWVKNIEFSSKDNLL 52 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 52 (68)
...+..++.++.++.++.|+..+ ...+..+.... ....-+.+..+++.+
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~t-G~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAAT-GEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTT-CCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCC-CceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 34567788889999999999988 55555554332 112233444565433
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=76.95 E-value=4.8 Score=19.37 Aligned_cols=52 Identities=17% Similarity=0.143 Sum_probs=29.0
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGF 57 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (68)
.++++++++-..++.|..++... . ..... ........+++.++++++++...
T Consensus 40 ~~~g~lyv~d~~~~~I~~~d~~g-~-~~~~~-~~~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 40 APDGTIFVTNHEVGEIVSITPDG-N-QQIHA-TVEGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CTTSCEEEEETTTTEEEEECTTC-C-EEEEE-ECSSEEEEEEECTTSCEEEEEEC
T ss_pred CCCCCEEEEeCCCCeEEEECCCC-c-eEEEE-eCCCCceeEEEcCCCcEEEEecc
Confidence 34566555544566676666543 2 22222 22345678888888876665543
No 251
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.58 E-value=8.3 Score=21.97 Aligned_cols=22 Identities=14% Similarity=0.501 Sum_probs=19.2
Q ss_pred ecCcEEEEeeCCCCEEEeecCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~ 25 (68)
.+..++++-+.|..+++|++.+
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t 250 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTS 250 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTT
T ss_pred cCCcEEEEEEcCCeEEEEEcCC
Confidence 4567889999999999999987
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=75.75 E-value=4.8 Score=18.81 Aligned_cols=65 Identities=8% Similarity=-0.123 Sum_probs=34.2
Q ss_pred eeecCcEEEEeeCC---CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCC-CEEEEEeCCCCEEEEeCC
Q psy11876 2 IFLDTRVFATCSDD---TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKD-NLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 67 (68)
+.+++..++.+... +.+..++... ................+++.+++ .++.+....+.|..++..
T Consensus 129 vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 129 TDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 34444455444432 4555555543 11111122222346788898865 455666666788877753
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=74.56 E-value=5.8 Score=19.13 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=33.9
Q ss_pred eecCcEEEEeeCCCCEEEeecCCCCcceEEeccCC-----CCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 3 FLDTRVFATCSDDTTIALWDARNLKTRVRTLQGHS-----NWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 3 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+++..++.+..+..+.++|..+ ......+.... ..+.-+.+. +++.++..-.+..|.+-|..
T Consensus 111 t~dg~~L~vSdgs~~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 111 TSDDSHLYMSDGTAVIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp EECSSCEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTT
T ss_pred eeCCCEEEEECCCCeEEEEeCCC-CeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECC
Confidence 45666677776678888888876 33334443321 122333433 44555555445566655543
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=73.18 E-value=6.6 Score=19.21 Aligned_cols=62 Identities=13% Similarity=0.196 Sum_probs=31.1
Q ss_pred ecCcEEEEeeCCC--CEEEeecCCCCcceEEeccCCCC-EEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDT--TIALWDARNLKTRVRTLQGHSNW-VKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.++.++.+.+.++ .++.++..+ ............. ...++.. ..+.+...-.++.+.++|..
T Consensus 51 ~~~~LyestG~~g~S~v~~vD~~T-gkv~~~~~l~~~~FgeGit~~-g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 51 RNGYFYESTGLNGRSSIRKVDIES-GKTLQQIELGKRYFGEGISDW-KDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTT-CCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETT
T ss_pred ECCEEEEECCCCCCceEEEEECCC-CcEEEEEecCCccceeEEEEe-CCEEEEEEeeCCEEEEEECc
Confidence 3555555655554 788888877 3333333322221 1223332 22333444456777777764
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=70.74 E-value=7.9 Score=19.06 Aligned_cols=62 Identities=11% Similarity=0.171 Sum_probs=34.0
Q ss_pred ecCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 4 LDTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.++.++.+.+.++.++.++..+ ................++... .+++...-.++.+.++|..
T Consensus 63 ~~~~Ly~stG~~g~v~~iD~~T-gkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 63 HQGHFFESTGHQGTLRQLSLES-AQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp ETTEEEEEETTTTEEEECCSSC-SSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEETT
T ss_pred ECCEEEEEcCCCCEEEEEECCC-CcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEECC
Confidence 3455667777777888888877 333333321111112333332 3444555557778888764
No 256
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=68.82 E-value=11 Score=20.15 Aligned_cols=63 Identities=11% Similarity=0.227 Sum_probs=36.6
Q ss_pred ecCcE-EEEeeCCCCEEEeecCCC-C--cceEEec-------cCCCCEEEEEEcCCCCEEEEEeCC------CCEEEEeC
Q psy11876 4 LDTRV-FATCSDDTTIALWDARNL-K--TRVRTLQ-------GHSNWVKNIEFSSKDNLLVTAGFD------GSIYTWDI 66 (68)
Q Consensus 4 ~~~~~-~~~~~~~~~v~~~~~~~~-~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~ 66 (68)
++++. ++.+..++.|.++|..+. . .....+. ......+.+...|++ ..++...+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 45544 566777789999998642 2 2222332 011234667778888 55554433 56777775
Q ss_pred C
Q psy11876 67 N 67 (68)
Q Consensus 67 ~ 67 (68)
.
T Consensus 172 ~ 172 (462)
T 2ece_A 172 Y 172 (462)
T ss_dssp T
T ss_pred C
Confidence 4
No 257
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=68.12 E-value=9.3 Score=18.84 Aligned_cols=61 Identities=5% Similarity=0.082 Sum_probs=32.3
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccC---------CCCEEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGH---------SNWVKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
.+..++.++.++.+..++..+ ....-..... ...+... ....+..+..++.++.+..+|..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~t-G~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~ 121 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADD-GKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTS 121 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTT-CCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETT
T ss_pred ECCEEEEEcCCCeEEEEEccC-CceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECC
Confidence 345677777788888888866 3333332221 1122111 11123455556667777777654
No 258
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=64.62 E-value=15 Score=19.86 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=19.0
Q ss_pred CEEEEEEcCCCC-EEEEEeCCCCEEEEe
Q psy11876 39 WVKNIEFSSKDN-LLVTAGFDGSIYTWD 65 (68)
Q Consensus 39 ~~~~~~~~~~~~-~~~~~~~~~~i~~~~ 65 (68)
....++++|++. ++++-.....|+.++
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 346899999987 455656667777654
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=63.72 E-value=11 Score=18.20 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=19.1
Q ss_pred EEEEEEcCCCC-EEEEEeCCCCEEEEeCC
Q psy11876 40 VKNIEFSSKDN-LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 40 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 67 (68)
...+++++++. ++++-...+.|..+++.
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 35678888876 45555666778877753
No 260
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=58.91 E-value=15 Score=17.93 Aligned_cols=24 Identities=13% Similarity=0.164 Sum_probs=16.8
Q ss_pred EEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 41 KNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
..+.+.+++.+.+. .|+.|.-++.
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESC
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCC
Confidence 56778888888777 4577765553
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=56.22 E-value=25 Score=19.77 Aligned_cols=65 Identities=11% Similarity=0.029 Sum_probs=33.1
Q ss_pred eeecCcEEEEeeCC-----CCEEEeecCCCC-cceEEec-cCCCCEEEEEEcCCCCEEEEEeC---CCCEEEEeC
Q psy11876 2 IFLDTRVFATCSDD-----TTIALWDARNLK-TRVRTLQ-GHSNWVKNIEFSSKDNLLVTAGF---DGSIYTWDI 66 (68)
Q Consensus 2 ~~~~~~~~~~~~~~-----~~v~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~ 66 (68)
.+||++.|+....+ ..+..+++.... .....+. ..........|+|+++.++.... ...+.++|.
T Consensus 228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp ECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred EecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 35777655554443 135555554421 1122222 22233457789999987654432 234555554
No 262
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=55.55 E-value=21 Score=18.67 Aligned_cols=56 Identities=11% Similarity=0.016 Sum_probs=35.6
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEE
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIY 62 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 62 (68)
-..++.-..-|.+.+||+.+ ..++..-.-....+...+......-+.+....|++.
T Consensus 271 ygviyviTK~G~ihlyDleT-gt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 271 HDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp TTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred CCEEEEEeCCcEEEEEEccc-CcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEE
Confidence 35677778889999999988 555555444455554444444444555666666654
No 263
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=53.46 E-value=18 Score=17.26 Aligned_cols=57 Identities=11% Similarity=0.033 Sum_probs=29.1
Q ss_pred cEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEEEeC
Q psy11876 7 RVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 7 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 66 (68)
..+..++.++.+..++. . .............+..+....+++++ .++.+|.+.+...
T Consensus 266 g~l~v~t~~ggl~~~d~-~-g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 266 DTIYFGSYDGHLYAINP-D-GTEKWNFETGSWIIATPVIDENGTIY-FGTRNGKFYALFN 322 (330)
T ss_dssp SCEEEECTTCEEEEECT-T-SCEEEEEECSSCCCSCCEECTTCCEE-EECTTSCEEEEEC
T ss_pred CeEEEecCCCCEEEECC-C-CcEEEEEEcCCccccceEEcCCCEEE-EEcCCCeEEEEec
Confidence 44566666666666664 2 23333333223333444444555544 4666777776543
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=52.60 E-value=22 Score=18.19 Aligned_cols=28 Identities=21% Similarity=0.406 Sum_probs=21.8
Q ss_pred EEEEEEcCCCCEEEEEeCCCCEEEEeCC
Q psy11876 40 VKNIEFSSKDNLLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 67 (68)
...+.+.|++..++....++.+..+|+.
T Consensus 187 ~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred cceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 4588999998777666558999888864
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=50.83 E-value=29 Score=18.96 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=28.5
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCE-EEEEEcCCCCEE
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWV-KNIEFSSKDNLL 52 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 52 (68)
.+..++.++.|+.++.++.++ ...+..+....... .-+.+..+++++
T Consensus 496 agglvf~g~~dg~l~A~D~~t-G~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKS-GKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTT-CCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCCEEEEECCCCcEEEEECCC-CCEEEEecCCCCcccCceEEEECCEEE
Confidence 356777799999999999987 55555554322211 124444566433
No 266
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=48.24 E-value=35 Score=19.17 Aligned_cols=27 Identities=19% Similarity=0.084 Sum_probs=17.3
Q ss_pred EEEEEEcCC-CCEEEEEeCCCCEEEEeC
Q psy11876 40 VKNIEFSSK-DNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 40 ~~~~~~~~~-~~~~~~~~~~~~i~~~~~ 66 (68)
...+++.+. ++++.+-...+.|..+++
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 456788875 456566555666776664
No 267
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=46.05 E-value=36 Score=18.67 Aligned_cols=58 Identities=10% Similarity=0.027 Sum_probs=37.3
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCCCCEEE
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFDGSIYT 63 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 63 (68)
.-..++.-..-|.+.++|+.+ ..++..-.-....+...+......-+.+....|++.-
T Consensus 269 kygviyviTK~G~i~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 269 KHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 326 (494)
T ss_dssp TTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEE
T ss_pred cCCEEEEEecCceEEEEeccc-ceeeeeecccCCceEEecccCCCCcEEEEccCceEEE
Confidence 345677777889999999988 5555555544555555444444556666666666543
No 268
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=43.99 E-value=38 Score=18.34 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=28.7
Q ss_pred cCcEEEEeeCCCCEEEeecCC-CCcce--------EEeccCCCCEEEEEEcCCC
Q psy11876 5 DTRVFATCSDDTTIALWDARN-LKTRV--------RTLQGHSNWVKNIEFSSKD 49 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~ 49 (68)
++..+++-..|+.|++|++.. ...|. .........+.+++|..++
T Consensus 138 ~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~ 191 (452)
T 3pbp_A 138 RDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG 191 (452)
T ss_dssp GGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS
T ss_pred CCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC
Confidence 467888899999999999874 12222 1111222456777887765
No 269
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=43.33 E-value=42 Score=18.67 Aligned_cols=17 Identities=29% Similarity=0.428 Sum_probs=12.3
Q ss_pred EEEEEeCCCCEEEEeCC
Q psy11876 51 LLVTAGFDGSIYTWDIN 67 (68)
Q Consensus 51 ~~~~~~~~~~i~~~~~~ 67 (68)
.++.++.++.+.++|..
T Consensus 316 ~v~~~~~~G~l~~lD~~ 332 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRT 332 (668)
T ss_dssp EEEECCTTSEEEEEETT
T ss_pred EEEEECCCCEEEEEECC
Confidence 46677778888888754
No 270
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=41.76 E-value=58 Score=19.86 Aligned_cols=62 Identities=8% Similarity=0.031 Sum_probs=35.2
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC------CCEEEEEeC-CCCEEEEeCC
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK------DNLLVTAGF-DGSIYTWDIN 67 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~i~~~~~~ 67 (68)
++.+++.+. ++.+.++++.........-......+.++++.+. ...++.+.. |++++++++.
T Consensus 522 n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 522 NSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 344555554 4566666654311111111223457888887652 357777775 8999998764
No 271
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=38.40 E-value=42 Score=17.24 Aligned_cols=30 Identities=10% Similarity=0.273 Sum_probs=21.3
Q ss_pred CCEEEEEEcCCCCE-EEEEeCCCCEEEEeCC
Q psy11876 38 NWVKNIEFSSKDNL-LVTAGFDGSIYTWDIN 67 (68)
Q Consensus 38 ~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 67 (68)
...+.++|+|+++. +++-+..+.+..|++.
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 34578999998854 4555667888888753
No 272
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=36.33 E-value=43 Score=16.79 Aligned_cols=45 Identities=9% Similarity=0.120 Sum_probs=23.8
Q ss_pred eeecCcEEEEeeCCCCEEEeecCCCCcceEEe---ccCCCCEEEEEEcCC
Q psy11876 2 IFLDTRVFATCSDDTTIALWDARNLKTRVRTL---QGHSNWVKNIEFSSK 48 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 48 (68)
+.|++++ +.+...+.|..++ ......+... .........++++|+
T Consensus 38 ~~pdG~l-~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pd 85 (352)
T 2ism_A 38 FLPDGGM-LIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPR 85 (352)
T ss_dssp ECTTSCE-EEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred EcCCCeE-EEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCC
Confidence 3467764 4445568888776 2211111111 112345678899987
No 273
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=28.21 E-value=56 Score=15.56 Aligned_cols=21 Identities=10% Similarity=0.403 Sum_probs=13.0
Q ss_pred cCcEEEEeeCC-----CCEEEeecCC
Q psy11876 5 DTRVFATCSDD-----TTIALWDARN 25 (68)
Q Consensus 5 ~~~~~~~~~~~-----~~v~~~~~~~ 25 (68)
++.+++.|+.+ ..+..|+..+
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCC
Confidence 55666666654 3566777765
No 274
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=27.77 E-value=1.3e+02 Score=19.71 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=15.8
Q ss_pred cCcEEEEeeCCCCEEEeecCC
Q psy11876 5 DTRVFATCSDDTTIALWDARN 25 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~ 25 (68)
.-..++.-..-|.+.++|+.+
T Consensus 269 k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 269 KHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred ccCEEEEEecCceEEEEeccc
Confidence 335666777778999999876
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=25.42 E-value=69 Score=15.69 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=18.0
Q ss_pred CCEEEEEEcCCC-CEEEEEeCCCCEEEEeC
Q psy11876 38 NWVKNIEFSSKD-NLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 66 (68)
.....+++.+.+ +++.+-...+.|..+++
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 345788888754 44455555567776665
No 276
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=25.29 E-value=65 Score=15.37 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=28.5
Q ss_pred ecCcEEEEeeCC-----CCEEEeecCCCCcceEEeccCCCCEEEEEEcCCCCEEEEEeCC-----CCEEEEeCC
Q psy11876 4 LDTRVFATCSDD-----TTIALWDARNLKTRVRTLQGHSNWVKNIEFSSKDNLLVTAGFD-----GSIYTWDIN 67 (68)
Q Consensus 4 ~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~ 67 (68)
.++.+++.|+.+ ..+..|+..+..............-.... ..++..++.++.+ ..+.+||+.
T Consensus 203 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 203 LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEEEEcCC
Confidence 355666666654 35666776553222111111111111222 1255566666544 246777764
No 277
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=23.28 E-value=73 Score=15.24 Aligned_cols=22 Identities=9% Similarity=0.222 Sum_probs=12.3
Q ss_pred ecCcEEEEeeCC----CCEEEeecCC
Q psy11876 4 LDTRVFATCSDD----TTIALWDARN 25 (68)
Q Consensus 4 ~~~~~~~~~~~~----~~v~~~~~~~ 25 (68)
.++.+++.|+.+ ..+..++..+
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~ 79 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVK 79 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTT
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCC
Confidence 355566666644 3455666654
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=22.60 E-value=1.1e+02 Score=17.06 Aligned_cols=29 Identities=7% Similarity=-0.005 Sum_probs=21.8
Q ss_pred cCcEEEEeeCCCCEEEeecCCCCcceEEec
Q psy11876 5 DTRVFATCSDDTTIALWDARNLKTRVRTLQ 34 (68)
Q Consensus 5 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 34 (68)
.+..++.++.|+.++.+|..+ ...+..+.
T Consensus 483 agg~vf~gt~dg~l~A~D~~t-G~~lW~~~ 511 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDT-GDLLWKFK 511 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTT-CCEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCC-CCEEEEee
Confidence 456777789999999999988 55555544
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=22.45 E-value=95 Score=16.23 Aligned_cols=57 Identities=7% Similarity=0.190 Sum_probs=32.2
Q ss_pred CcEEEEeeCCCCEEEeecCCCCcceEEeccCCCCEEEEEEcCC----CC---E-EEEEeC--CCCEEEEeC
Q psy11876 6 TRVFATCSDDTTIALWDARNLKTRVRTLQGHSNWVKNIEFSSK----DN---L-LVTAGF--DGSIYTWDI 66 (68)
Q Consensus 6 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~-~~~~~~--~~~i~~~~~ 66 (68)
.+.++.....+-+.+|++. ++.+..+.. ..++.+.+.|. ++ + +++... +.++.+|++
T Consensus 40 ~s~ii~t~k~~gL~Vydl~--G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD--GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp GCEEEEEETTTEEEEEETT--SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred ccEEEEEcCCCCEEEEcCC--CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 3455555556788999993 444444432 44566666552 11 2 333334 577888854
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=21.88 E-value=86 Score=15.55 Aligned_cols=29 Identities=10% Similarity=0.169 Sum_probs=18.0
Q ss_pred CCEEEEEEcCC-CCEEEEEeCCCCEEEEeC
Q psy11876 38 NWVKNIEFSSK-DNLLVTAGFDGSIYTWDI 66 (68)
Q Consensus 38 ~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~ 66 (68)
.....+++.+. ++++.+-...+.|..+++
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 34578888875 445555555566766664
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=20.53 E-value=89 Score=15.21 Aligned_cols=61 Identities=16% Similarity=0.285 Sum_probs=31.7
Q ss_pred eecCc-EEEEeeCCCCEEEeecCCCCcceEEec-cCCCCEEEEEEcCCCCEEEEEeCCCCEEEEe
Q psy11876 3 FLDTR-VFATCSDDTTIALWDARNLKTRVRTLQ-GHSNWVKNIEFSSKDNLLVTAGFDGSIYTWD 65 (68)
Q Consensus 3 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 65 (68)
.|+++ ++++...++.+...+.. ......+. ........+++.+++.++++.-.++.+.+++
T Consensus 35 ~~~~~~L~aV~d~~~~I~~ld~~--g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 35 SAQSNTLFSTINKPAAIVEMTTN--GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ETTTTEEEEEEETTEEEEEEETT--CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred eCCCCEEEEEECCCCeEEEEeCC--CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 34444 44556666666666654 33333332 2223345777777666555544445555554
Done!