Query psy11884
Match_columns 644
No_of_seqs 396 out of 2946
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 21:25:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11884.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11884hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 4.7E-57 1.6E-61 478.5 23.0 285 201-605 25-319 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 3.8E-52 1.3E-56 425.4 21.9 221 377-598 10-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 1.1E-39 3.7E-44 318.7 21.2 169 378-601 2-179 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 3.9E-38 1.3E-42 307.4 21.9 168 377-601 2-179 (180)
5 1c3g_A Heat shock protein 40; 100.0 1E-35 3.5E-40 287.8 18.1 159 380-598 2-170 (170)
6 3i38_A Putative chaperone DNAJ 99.9 3.7E-24 1.3E-28 192.6 12.1 96 506-604 2-97 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 1.8E-22 6.3E-27 184.7 10.9 95 510-604 1-99 (121)
8 2ctt_A DNAJ homolog subfamily 99.8 7.4E-22 2.5E-26 175.9 0.2 102 379-480 2-103 (104)
9 1bq0_A DNAJ, HSP40; chaperone, 99.8 7.8E-21 2.7E-25 168.9 5.4 74 203-276 2-75 (103)
10 2dn9_A DNAJ homolog subfamily 99.8 1.4E-19 5E-24 152.9 6.2 72 202-273 5-76 (79)
11 2ctr_A DNAJ homolog subfamily 99.8 1.8E-19 6.3E-24 155.6 6.5 73 202-275 5-77 (88)
12 1hdj_A Human HSP40, HDJ-1; mol 99.8 2.1E-19 7.2E-24 151.2 6.0 72 203-275 2-73 (77)
13 2yua_A Williams-beuren syndrom 99.8 4E-19 1.4E-23 156.8 7.6 73 199-271 12-84 (99)
14 2dmx_A DNAJ homolog subfamily 99.8 6E-19 2E-23 153.5 6.3 75 202-276 7-82 (92)
15 2ej7_A HCG3 gene; HCG3 protein 99.8 7.5E-19 2.6E-23 149.5 6.6 73 202-274 7-80 (82)
16 2ctp_A DNAJ homolog subfamily 99.8 5.9E-19 2E-23 148.8 5.6 71 202-273 5-75 (78)
17 2cug_A Mkiaa0962 protein; DNAJ 99.7 1.6E-18 5.5E-23 149.7 6.6 71 202-273 15-85 (88)
18 2ctw_A DNAJ homolog subfamily 99.7 1.6E-18 5.4E-23 155.7 6.6 74 202-275 15-88 (109)
19 2o37_A Protein SIS1; HSP40, J- 99.7 1.3E-18 4.5E-23 151.5 5.1 73 202-277 6-78 (92)
20 2ctq_A DNAJ homolog subfamily 99.7 8.9E-19 3.1E-23 158.0 4.2 73 202-274 18-90 (112)
21 2och_A Hypothetical protein DN 99.7 2.2E-18 7.5E-23 143.6 5.9 67 202-271 6-72 (73)
22 2lgw_A DNAJ homolog subfamily 99.7 1.5E-18 5.2E-23 153.3 4.6 73 204-276 2-75 (99)
23 1wjz_A 1700030A21RIK protein; 99.7 5E-18 1.7E-22 148.0 5.6 71 201-271 13-89 (94)
24 3apq_A DNAJ homolog subfamily 99.7 2.9E-17 9.9E-22 161.4 5.4 72 204-275 2-73 (210)
25 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 2.4E-17 8.1E-22 147.8 2.4 70 202-271 13-86 (109)
26 2ys8_A RAB-related GTP-binding 99.6 1.8E-16 6.1E-21 137.6 5.8 62 203-265 26-87 (90)
27 2l6l_A DNAJ homolog subfamily 99.6 3E-16 1E-20 149.1 5.7 70 202-271 8-83 (155)
28 1gh6_A Large T antigen; tumor 99.6 1.4E-16 4.6E-21 144.3 0.5 68 203-274 7-76 (114)
29 1iur_A KIAA0730 protein; DNAJ 99.6 6.3E-16 2.2E-20 133.8 3.7 64 202-265 14-78 (88)
30 1faf_A Large T antigen; J doma 99.6 7.8E-16 2.7E-20 130.5 3.6 65 203-272 10-76 (79)
31 2pf4_E Small T antigen; PP2A, 99.5 4.1E-16 1.4E-20 150.7 0.5 66 203-272 10-77 (174)
32 3hho_A CO-chaperone protein HS 99.5 4.3E-15 1.5E-19 144.0 4.5 67 203-269 3-76 (174)
33 2guz_A Mitochondrial import in 99.5 8E-15 2.7E-19 121.7 4.9 60 201-264 11-71 (71)
34 1n4c_A Auxilin; four helix bun 99.5 4.1E-15 1.4E-19 144.6 2.8 64 203-266 116-182 (182)
35 1fpo_A HSC20, chaperone protei 99.5 8.1E-15 2.8E-19 141.6 3.7 66 205-270 2-74 (171)
36 2qwo_B Putative tyrosine-prote 99.5 5.8E-15 2E-19 128.6 1.4 56 204-259 33-91 (92)
37 3bvo_A CO-chaperone protein HS 99.5 2.1E-14 7.2E-19 142.7 4.8 66 203-268 42-114 (207)
38 3apo_A DNAJ homolog subfamily 99.5 7.2E-15 2.5E-19 170.8 0.8 76 202-277 19-94 (780)
39 1exk_A DNAJ protein; extended 99.4 4.6E-14 1.6E-18 119.0 3.5 78 395-472 1-78 (79)
40 3ag7_A Putative uncharacterize 99.4 2.2E-14 7.6E-19 128.2 1.3 59 202-261 39-104 (106)
41 3uo3_A J-type CO-chaperone JAC 99.4 5.3E-14 1.8E-18 137.1 2.8 65 202-269 9-80 (181)
42 1nlt_A Protein YDJ1, mitochond 99.2 4.7E-12 1.6E-16 129.1 4.5 116 421-596 37-164 (248)
43 2y4t_A DNAJ homolog subfamily 98.7 6.5E-09 2.2E-13 109.3 4.6 66 203-268 381-449 (450)
44 2guz_B Mitochondrial import in 98.6 1.4E-08 4.9E-13 82.7 3.9 54 203-260 3-59 (65)
45 1c3g_A Heat shock protein 40; 98.6 7.1E-08 2.4E-12 92.8 9.4 80 516-595 1-88 (170)
46 2q2g_A HSP40 protein, heat sho 98.6 8.5E-08 2.9E-12 93.1 9.8 81 515-595 3-94 (180)
47 3lz8_A Putative chaperone DNAJ 98.6 1.1E-07 3.7E-12 100.7 9.0 81 513-593 138-231 (329)
48 3agx_A DNAJ homolog subfamily 98.5 2.4E-07 8.3E-12 90.0 10.0 80 515-595 2-94 (181)
49 3i38_A Putative chaperone DNAJ 97.6 6.5E-05 2.2E-09 67.1 5.9 31 476-506 40-77 (109)
50 1exk_A DNAJ protein; extended 97.5 3.8E-05 1.3E-09 64.1 3.2 47 420-471 9-63 (79)
51 3lcz_A YCZA, inhibitor of trap 97.5 3.2E-05 1.1E-09 60.4 1.8 30 443-472 8-37 (53)
52 1xao_A YDJ1, mitochondrial pro 97.3 0.00035 1.2E-08 63.4 6.4 35 475-509 35-80 (121)
53 2ctt_A DNAJ homolog subfamily 97.0 0.00039 1.3E-08 61.2 4.1 47 419-470 25-79 (104)
54 3pmq_A Decaheme cytochrome C M 97.0 6.8E-06 2.3E-10 93.9 -9.2 73 383-455 169-257 (669)
55 2bx9_A Anti-trap, AT, tryptoph 96.7 0.00052 1.8E-08 53.5 2.0 28 444-471 9-36 (53)
56 2bx9_A Anti-trap, AT, tryptoph 95.1 0.007 2.4E-07 47.1 1.7 27 406-435 10-36 (53)
57 3lcz_A YCZA, inhibitor of trap 94.8 0.0097 3.3E-07 46.3 1.7 28 405-435 9-36 (53)
58 2pzi_A Probable serine/threoni 75.6 0.98 3.4E-05 51.3 2.0 47 202-256 627-675 (681)
59 2ou3_A Tellurite resistance pr 68.7 1.2 4.1E-05 41.6 0.5 50 120-175 97-146 (161)
60 2qkd_A Zinc finger protein ZPR 58.2 21 0.00072 38.4 7.8 27 532-563 294-320 (404)
61 2qkd_A Zinc finger protein ZPR 47.4 21 0.0007 38.5 5.5 27 532-563 86-112 (404)
62 2h5n_A Hypothetical protein PG 41.6 20 0.00069 32.2 3.8 42 118-165 85-126 (133)
63 1ltl_A DNA replication initiat 39.7 43 0.0015 33.8 6.4 15 588-602 255-269 (279)
64 2iwr_A Centaurin gamma 1; ANK 30.5 1.1E+02 0.0038 26.9 7.0 74 66-142 72-165 (178)
65 2jne_A Hypothetical protein YF 29.6 40 0.0014 29.2 3.4 51 406-466 33-89 (101)
66 2jxu_A TERB, KP-TERB; tellurit 27.8 6.4 0.00022 35.9 -2.0 41 118-164 111-151 (153)
67 2kdx_A HYPA, hydrogenase/ureas 26.5 60 0.002 28.5 4.2 40 393-433 60-101 (119)
68 1nkw_E 50S ribosomal protein L 24.9 1.3E+02 0.0044 29.5 6.6 28 476-503 34-64 (212)
69 2fiy_A Protein FDHE homolog; F 20.6 79 0.0027 32.7 4.3 46 423-468 183-232 (309)
70 2vl6_A SSO MCM N-TER, minichro 20.2 1E+02 0.0036 30.6 5.1 15 443-457 167-181 (268)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=4.7e-57 Score=478.53 Aligned_cols=285 Identities=26% Similarity=0.470 Sum_probs=153.1
Q ss_pred CCccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCccccccccC
Q psy11884 201 LKRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQMSAAG 280 (644)
Q Consensus 201 ~~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~~~~~g 280 (644)
+..+|||++|||+++||.+|||+|||+||++||||+++. +.|+++|++|++||++|+||.+|+.||+++......++.+
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~ 103 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR 103 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence 356899999999999999999999999999999999975 5889999999999999999999999999854322111100
Q ss_pred CCCCCCccccccccCCCCCCChHHHHHhhhCCCCCCcchhhHHHhhccCCCCCchhhhhhhhhccccCcchhhccccccc
Q psy11884 281 ASRSTTAEDYMHRWNFKSSVDPEELFRKIFGDTGFDFKVTEEEFIANKYGFGSSQEVILKIDKCLQQVPVDLQLQRTTCI 360 (644)
Q Consensus 281 ~~~~~~~~~f~~~~~~~~~~d~~dlF~~fFG~~~f~~~~~~~~~~~~~~~f~~s~~~~~~~~k~~~~~p~~~~~qr~~~~ 360 (644)
+.+....+ |. ..+++|+|++|||+++.. . +.
T Consensus 104 -~~~~~~~~------f~-~~~f~diF~~~Fg~~g~~-----------~---~~--------------------------- 134 (329)
T 3lz8_A 104 -QRQTHEQS------YS-QQDFDDIFSSMFGQQAHQ-----------R---RR--------------------------- 134 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -ccccccCC------cC-CCchhhhhHhhhcCcCCC-----------C---CC---------------------------
Confidence 00000001 11 125678899998752111 0 00
Q ss_pred CCccchhhhhhhccCCCCCceEEEEecCHHHHhcCceEEEEeeeeecCCCCCcccccCCCccccCCCCCCcceEEeeecC
Q psy11884 361 GGISITEEEFIANKYGFGSSQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGP 440 (644)
Q Consensus 361 gg~~~~~~~~~~~~~~~g~d~ev~L~vTLeEa~~G~~k~i~v~~~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~~~~G~ 440 (644)
....+|.|+++.|.|||||+|+|++++|.+++.+.| |.|
T Consensus 135 ------------~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~---------------------g~G-------- 173 (329)
T 3lz8_A 135 ------------QHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN---------------------VFG-------- 173 (329)
T ss_dssp --------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC---------------------SCC--------
T ss_pred ------------CCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec---------------------CCe--------
Confidence 001357899999999999999999999999876522 111
Q ss_pred ceeeeecCCCCceeEEEeeccccCCCCceeEEEEEEEEeeCCCCCCCCEEEEecCC---------ceEEEEEEeecCCCc
Q psy11884 441 FIMKTTCRYCSGSGIYIKFPCQNCDGMGQNIQRRTVSIPIPQGIEDGQTIRFPIGQ---------DQIFVTFQVIPSSRY 511 (644)
Q Consensus 441 ~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~e~~~l~V~IPpGv~dG~~I~~~g~g---------gDL~v~i~vkph~~F 511 (644)
...+.+.++++|+||||+++|++|+|+|+| |||+|+|+|+||+.|
T Consensus 174 --------------------------~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F 227 (329)
T 3lz8_A 174 --------------------------MIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLF 227 (329)
T ss_dssp ---------------------------CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCSSC
T ss_pred --------------------------EEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCCcc
Confidence 112334678999999999999999999742 699999999999999
Q ss_pred cccCCCeEEEEecCHhHhhcCCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCccEEEEEEEECCCCCCH
Q psy11884 512 HRDQSDIHTEESISISQAILGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFVHVKIEVPRYPSE 591 (644)
Q Consensus 512 ~R~G~DL~~~~~Isl~eALlG~~~~I~tLdG~~l~V~IppG~~~g~~irI~GeG~P~~~~~~rGDL~V~f~V~fP~~Ls~ 591 (644)
+|+|+||+++++|++++|+||++++|+||||+ +.|+||+|+++|++++|+|+|||.. ..+|||||+|+|+||+.|++
T Consensus 228 ~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~--~~rGDL~v~~~V~~P~~l~~ 304 (329)
T 3lz8_A 228 DIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK--THTGDLFAVIKIVMPTKPDE 304 (329)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS--SCBCCEEEEEEECCCSSCCH
T ss_pred EEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC--CCCCCEEEEEEEECCCCCCH
Confidence 99999999999999999999999999999998 4999999999999999999999976 46999999999999999999
Q ss_pred HHHHHHHHHhh-hCC
Q psy11884 592 KQKDLVREFFS-VEP 605 (644)
Q Consensus 592 ~q~~lL~~l~~-~~~ 605 (644)
+|+++|++|++ ...
T Consensus 305 ~q~~~l~~~~~~~~~ 319 (329)
T 3lz8_A 305 KARELWQQLAAAEAS 319 (329)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhccC
Confidence 99999999998 443
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=3.8e-52 Score=425.43 Aligned_cols=221 Identities=28% Similarity=0.522 Sum_probs=196.9
Q ss_pred CCCceEEEEecCHHHHhcCceEEEEeeeeecCCCCCcccccCCCccccCCCCCCcceEE--eeecCce--eeeecCCCCc
Q psy11884 377 FGSSQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYET--TTTGPFI--MKTTCRYCSG 452 (644)
Q Consensus 377 ~g~d~ev~L~vTLeEa~~G~~k~i~v~~~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~--~~~G~~~--~~~~C~~C~G 452 (644)
+|.|+++.|.|||||||+|++++|.+++.+.|+.|+|+|+++++ ..+|+.|+|+|.+. .++|+++ ++++|+.|+|
T Consensus 10 ~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G 88 (248)
T 1nlt_A 10 RGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHG 88 (248)
T ss_dssp BCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSS
T ss_pred CCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCC
Confidence 58899999999999999999999999999999999999999988 49999999999753 4568753 5679999999
Q ss_pred eeEEE--eeccccCCCCceeEEEEEEEEeeCCCCCCCCEEEEecCC--------ceEEEEEEeecCCCccccCCCeEEEE
Q psy11884 453 SGIYI--KFPCQNCDGMGQNIQRRTVSIPIPQGIEDGQTIRFPIGQ--------DQIFVTFQVIPSSRYHRDQSDIHTEE 522 (644)
Q Consensus 453 ~G~~i--~~~C~~C~G~G~v~e~~~l~V~IPpGv~dG~~I~~~g~g--------gDL~v~i~vkph~~F~R~G~DL~~~~ 522 (644)
+|+++ +++|+.|+|.|.+.+.++++|.|||||++|++|+|+|+| |||||+|+++||+.|+|+|+||++++
T Consensus 89 ~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~ 168 (248)
T 1nlt_A 89 TGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEA 168 (248)
T ss_dssp SSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEE
T ss_pred cCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEE
Confidence 99999 899999999999999999999999999999999999764 69999999999999999999999999
Q ss_pred ecCHhHhhcCCEEEEEeeeCcEEEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCccEEEEEEEECCCC--CCHHHHHHHH
Q psy11884 523 SISISQAILGGTINVEGIYGDTLSVEIQPG--TSSHTKIKIPYKGLKNRNSSGYGHHFVHVKIEVPRY--PSEKQKDLVR 598 (644)
Q Consensus 523 ~Isl~eALlG~~~~I~tLdG~~l~V~IppG--~~~g~~irI~GeG~P~~~~~~rGDL~V~f~V~fP~~--Ls~~q~~lL~ 598 (644)
+|+|.+||+|++++|+||||+.+.|+|||| +++|++++|+|+|||..+...+|||||+|+|+||+. ||++|+++|+
T Consensus 169 ~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~l~ 248 (248)
T 1nlt_A 169 EIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKKLE 248 (248)
T ss_dssp EEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-------------
T ss_pred EeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHhhC
Confidence 999999999999999999998789999999 999999999999999864447899999999999999 9999999885
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=1.1e-39 Score=318.65 Aligned_cols=169 Identities=21% Similarity=0.348 Sum_probs=152.8
Q ss_pred CCceEEEEecCHHHHhcCceEEEEeeeeecCCCCCcccccCCCccccCCCCCCcceEEeeecCceeeeecCCCCceeEEE
Q psy11884 378 GSSQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYI 457 (644)
Q Consensus 378 g~d~ev~L~vTLeEa~~G~~k~i~v~~~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i 457 (644)
++|+++.|.|||||||+|+++++.+++
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------------------------- 28 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------------------------- 28 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence 357889999999999999999998752
Q ss_pred eeccccCCCCceeEEEEEEEEeeCCCCCCCCEEEEecCC--------ceEEEEEEeecCCCccccCCCeEEEEecCHhHh
Q psy11884 458 KFPCQNCDGMGQNIQRRTVSIPIPQGIEDGQTIRFPIGQ--------DQIFVTFQVIPSSRYHRDQSDIHTEESISISQA 529 (644)
Q Consensus 458 ~~~C~~C~G~G~v~e~~~l~V~IPpGv~dG~~I~~~g~g--------gDL~v~i~vkph~~F~R~G~DL~~~~~Isl~eA 529 (644)
+|..|+|.|.+.+.++++|+||||+++|++|+|+|+| |||+|+|+++||+.|+|+|+||+++++|++.+|
T Consensus 29 --~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eA 106 (181)
T 3agx_A 29 --KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREA 106 (181)
T ss_dssp --EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHH
T ss_pred --ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHH
Confidence 3455667777788999999999999999999999754 699999999999999999999999999999999
Q ss_pred hcCCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcCCCcCCCC-CCCCccEEEEEEEECCCCCCHHHHHHHHHHh
Q psy11884 530 ILGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKNRN-SSGYGHHFVHVKIEVPRYPSEKQKDLVREFF 601 (644)
Q Consensus 530 LlG~~~~I~tLdG~~l~V~IppG~~~g~~irI~GeG~P~~~-~~~rGDL~V~f~V~fP~~Ls~~q~~lL~~l~ 601 (644)
++|+++.|+|+||+.+.|++|+++++|++++|+|+|||..+ +..+|||||+|+|.||+.||++|+++|++++
T Consensus 107 llG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 107 LCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp HHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred hCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 99999999999998889999999999999999999999864 3568999999999999999999999999997
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.9e-38 Score=307.42 Aligned_cols=168 Identities=21% Similarity=0.315 Sum_probs=153.9
Q ss_pred CCCceEEEEecCHHHHhcCceEEEEeeeeecCCCCCcccccCCCccccCCCCCCcceEEeeecCceeeeecCCCCceeEE
Q psy11884 377 FGSSQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIY 456 (644)
Q Consensus 377 ~g~d~ev~L~vTLeEa~~G~~k~i~v~~~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~ 456 (644)
++.|+++.|.|||||||+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3678999999999999999999999998776621
Q ss_pred EeeccccCCCCceeEEEEEEEEeeCCCCCCCCEEEEecCC---------ceEEEEEEeecCCCccccCCCeEEEEecCHh
Q psy11884 457 IKFPCQNCDGMGQNIQRRTVSIPIPQGIEDGQTIRFPIGQ---------DQIFVTFQVIPSSRYHRDQSDIHTEESISIS 527 (644)
Q Consensus 457 i~~~C~~C~G~G~v~e~~~l~V~IPpGv~dG~~I~~~g~g---------gDL~v~i~vkph~~F~R~G~DL~~~~~Isl~ 527 (644)
|.+.+.++++|.|||||++|++|+|+|+| |||+|+|+++||+.|+|+|+||+++++|++.
T Consensus 36 -----------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~ 104 (180)
T 2q2g_A 36 -----------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLV 104 (180)
T ss_dssp -----------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHH
T ss_pred -----------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHH
Confidence 45667899999999999999999999743 6999999999999999999999999999999
Q ss_pred HhhcCCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcCCCcCCCC-CCCCccEEEEEEEECCCCCCHHHHHHHHHHh
Q psy11884 528 QAILGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKNRN-SSGYGHHFVHVKIEVPRYPSEKQKDLVREFF 601 (644)
Q Consensus 528 eALlG~~~~I~tLdG~~l~V~IppG~~~g~~irI~GeG~P~~~-~~~rGDL~V~f~V~fP~~Ls~~q~~lL~~l~ 601 (644)
+|++|+++.|+||||+.+.|++|+++++|++++|+|+|||..+ ++.+|||||+|+|.||+.||++|+++|++++
T Consensus 105 eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 105 RALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp HHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred HHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 9999999999999998889999999999999999999999854 3568999999999999999999999999986
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=1e-35 Score=287.84 Aligned_cols=159 Identities=19% Similarity=0.296 Sum_probs=144.5
Q ss_pred ceEEEEecCHHHHhcCceEEEEeeeeecCCCCCcccccCCCccccCCCCCCcceEEeeecCceeeeecCCCCceeEEEee
Q psy11884 380 SQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYIKF 459 (644)
Q Consensus 380 d~ev~L~vTLeEa~~G~~k~i~v~~~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~~ 459 (644)
|+++.|.|||||||+|+++++++++..
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~----------------------------------------------------- 28 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKG----------------------------------------------------- 28 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEE-----------------------------------------------------
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEec-----------------------------------------------------
Confidence 678999999999999999999998641
Q ss_pred ccccCCCCceeEEEEEEEEeeCCCCCCCCEEEEecCC---------ceEEEEEEeecCCCccccCCCeEEEEecCHhHhh
Q psy11884 460 PCQNCDGMGQNIQRRTVSIPIPQGIEDGQTIRFPIGQ---------DQIFVTFQVIPSSRYHRDQSDIHTEESISISQAI 530 (644)
Q Consensus 460 ~C~~C~G~G~v~e~~~l~V~IPpGv~dG~~I~~~g~g---------gDL~v~i~vkph~~F~R~G~DL~~~~~Isl~eAL 530 (644)
+.|.+ +.++++|.||||+++|++|+|+|+| |||+|+|+++||+.|+|+|+||+++++|++.+|+
T Consensus 29 ------~~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl 101 (170)
T 1c3g_A 29 ------PHGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESL 101 (170)
T ss_dssp ------TTTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHH
T ss_pred ------CCCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHh
Confidence 01234 6789999999999999999999753 6999999999999999999999999999999999
Q ss_pred cCCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcCCCcCCCCC-CCCccEEEEEEEECCCCCCHHHHHHHH
Q psy11884 531 LGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKNRNS-SGYGHHFVHVKIEVPRYPSEKQKDLVR 598 (644)
Q Consensus 531 lG~~~~I~tLdG~~l~V~IppG~~~g~~irI~GeG~P~~~~-~~rGDL~V~f~V~fP~~Ls~~q~~lL~ 598 (644)
+|+++.|+||||+.+.|++|+++++|++++|+|+|||..+. +.+|||||+|+|.||+.||++|+++|+
T Consensus 102 lG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 102 LGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp HCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred CCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999987899999999999999999999998643 468999999999999999999999873
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.91 E-value=3.7e-24 Score=192.56 Aligned_cols=96 Identities=21% Similarity=0.385 Sum_probs=90.0
Q ss_pred ecCCCccccCCCeEEEEecCHhHhhcCCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCccEEEEEEEEC
Q psy11884 506 IPSSRYHRDQSDIHTEESISISQAILGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFVHVKIEV 585 (644)
Q Consensus 506 kph~~F~R~G~DL~~~~~Isl~eALlG~~~~I~tLdG~~l~V~IppG~~~g~~irI~GeG~P~~~~~~rGDL~V~f~V~f 585 (644)
+||+.|+|+|+||+++++|++.+|++|++++|+|+||. +.|+||+|+++|++++|+|+|||.. + .+|||||+|+|.|
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~~-~-~~GDL~v~~~V~~ 78 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK-T-HTGDLFAVIKIVM 78 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS-S-CBCCEEEEEEECC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCCC-C-CCcCEEEEEEEEC
Confidence 69999999999999999999999999999999999995 6999999999999999999999983 3 7999999999999
Q ss_pred CCCCCHHHHHHHHHHhhhC
Q psy11884 586 PRYPSEKQKDLVREFFSVE 604 (644)
Q Consensus 586 P~~Ls~~q~~lL~~l~~~~ 604 (644)
|+.||++|+++|+++++..
T Consensus 79 P~~Ls~~q~~~l~~l~~~~ 97 (109)
T 3i38_A 79 PTKPDEKARELWQQLAAAE 97 (109)
T ss_dssp CSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999873
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.8e-22 Score=184.71 Aligned_cols=95 Identities=29% Similarity=0.479 Sum_probs=85.8
Q ss_pred CccccCCCeEEEEecCHhHhhcCCEEEEEeeeCcEEEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCccEEEEEEEECCC
Q psy11884 510 RYHRDQSDIHTEESISISQAILGGTINVEGIYGDTLSVEIQPG--TSSHTKIKIPYKGLKNRNSSGYGHHFVHVKIEVPR 587 (644)
Q Consensus 510 ~F~R~G~DL~~~~~Isl~eALlG~~~~I~tLdG~~l~V~IppG--~~~g~~irI~GeG~P~~~~~~rGDL~V~f~V~fP~ 587 (644)
.|+|+|+||+++++|++.+|++|+++.|+|+||+.+.|+||+| +++|++++|+|+|||..+...+|||||+|+|.+|+
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~ 80 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPE 80 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence 4899999999999999999999999999999999889999999 99999999999999986544789999999999999
Q ss_pred C--CCHHHHHHHHHHhhhC
Q psy11884 588 Y--PSEKQKDLVREFFSVE 604 (644)
Q Consensus 588 ~--Ls~~q~~lL~~l~~~~ 604 (644)
. |+++|+++|++++...
T Consensus 81 ~~~ls~~q~~~l~~l~~~~ 99 (121)
T 1xao_A 81 NHFTSEENLKKLEEILPPR 99 (121)
T ss_dssp TTCSCHHHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHcccc
Confidence 9 9999999999999654
No 8
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=7.4e-22 Score=175.92 Aligned_cols=102 Identities=44% Similarity=0.830 Sum_probs=95.0
Q ss_pred CceEEEEecCHHHHhcCceEEEEeeeeecCCCCCcccccCCCccccCCCCCCcceEEeeecCceeeeecCCCCceeEEEe
Q psy11884 379 SSQEVILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYIK 458 (644)
Q Consensus 379 ~d~ev~L~vTLeEa~~G~~k~i~v~~~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~ 458 (644)
.++.+.|.|||||||+|++++|.+++.+.|+.|+|+|+.+++...+|+.|+|+|++....|+++++++|+.|+|+|++++
T Consensus 2 ~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~ 81 (104)
T 2ctt_A 2 SSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII 81 (104)
T ss_dssp CCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS
T ss_pred CceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC
Confidence 46678899999999999999999999999999999999999888999999999988777799888899999999999999
Q ss_pred eccccCCCCceeEEEEEEEEee
Q psy11884 459 FPCQNCDGMGQNIQRRTVSIPI 480 (644)
Q Consensus 459 ~~C~~C~G~G~v~e~~~l~V~I 480 (644)
++|+.|+|.|.+.++++|+|+|
T Consensus 82 ~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 82 SPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SCCSSSSSCSEECCCCSSCCSC
T ss_pred CcCCCCCCeeEEEEEEEEEEEc
Confidence 9999999999999888888765
No 9
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.81 E-value=7.8e-21 Score=168.92 Aligned_cols=74 Identities=51% Similarity=0.896 Sum_probs=69.4
Q ss_pred ccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCccccc
Q psy11884 203 RKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQM 276 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~~ 276 (644)
..|||+||||+++|+.+|||+|||+|++++|||+++.++.++++|++|++||++|+||.+|+.||.+|..+...
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 36899999999999999999999999999999999877789999999999999999999999999999887754
No 10
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.4e-19 Score=152.87 Aligned_cols=72 Identities=64% Similarity=1.091 Sum_probs=67.8
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATS 273 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~ 273 (644)
...|||+||||+++|+.++||+|||+|++++|||+++.++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 457999999999999999999999999999999999877889999999999999999999999999998643
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.8e-19 Score=155.64 Aligned_cols=73 Identities=52% Similarity=0.894 Sum_probs=68.4
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQ 275 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~ 275 (644)
...|||+||||+++|+.+|||+|||+|++++|||+++. +.+.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 45799999999999999999999999999999999984 78999999999999999999999999999987664
No 12
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.77 E-value=2.1e-19 Score=151.24 Aligned_cols=72 Identities=50% Similarity=0.878 Sum_probs=67.2
Q ss_pred ccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcccc
Q psy11884 203 RKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQ 275 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~ 275 (644)
..|||+||||+++|+.++||+|||+|++++|||+++. +.+.++|++|++||++|+||.+|+.||.+|.++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 3689999999999999999999999999999999975 67899999999999999999999999999986654
No 13
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=4e-19 Score=156.83 Aligned_cols=73 Identities=34% Similarity=0.607 Sum_probs=67.6
Q ss_pred cCCCccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCC
Q psy11884 199 SNLKRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGA 271 (644)
Q Consensus 199 ~~~~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~ 271 (644)
..+...|||+||||+++|+.+|||+|||+|+++||||+++.++.+.++|++|++||++|+||.+|+.||....
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3456789999999999999999999999999999999998778899999999999999999999999998543
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=6e-19 Score=153.48 Aligned_cols=75 Identities=48% Similarity=0.747 Sum_probs=68.7
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHhhhhhhhhcCcccccccccccCCccccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTD-PNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQM 276 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~-~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~~ 276 (644)
...|||+||||+++|+.+|||+|||+|++++|||+++.. +.++++|++|++||++|+||.+|+.||.+|..+...
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 457999999999999999999999999999999998765 468999999999999999999999999999876643
No 15
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=7.5e-19 Score=149.50 Aligned_cols=73 Identities=45% Similarity=0.803 Sum_probs=67.1
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHhhhhhhhhcCcccccccccccCCccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTD-PNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSE 274 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~-~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~ 274 (644)
...|||+||||+++++.+|||+|||+|++++|||+++.. +.+.++|++|++||++|+||.+|+.||.+|..+.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 457999999999999999999999999999999999865 3688999999999999999999999999987544
No 16
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5.9e-19 Score=148.84 Aligned_cols=71 Identities=45% Similarity=0.863 Sum_probs=66.6
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATS 273 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~ 273 (644)
...|||+||||+++|+.++||+|||+|++++|||+++. +.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 45799999999999999999999999999999999975 789999999999999999999999999998654
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=1.6e-18 Score=149.69 Aligned_cols=71 Identities=45% Similarity=0.841 Sum_probs=66.4
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATS 273 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~ 273 (644)
...|||+||||+++|+.+|||+|||+|++++|||+++. +.++++|++|++||++|+||.+|+.||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 46799999999999999999999999999999999986 678999999999999999999999999998643
No 18
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=1.6e-18 Score=155.71 Aligned_cols=74 Identities=42% Similarity=0.770 Sum_probs=69.5
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQ 275 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~ 275 (644)
...|||+||||+++|+.+|||+|||+|++++|||+++.++++.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 46799999999999999999999999999999999987788999999999999999999999999999976553
No 19
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.3e-18 Score=151.53 Aligned_cols=73 Identities=41% Similarity=0.761 Sum_probs=67.0
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcccccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQMS 277 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~~~ 277 (644)
+..|||+||||+++|+.+|||+|||+|++++|||+++++ .++|++|++||++|+||.+|+.||.+|.++...+
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 457999999999999999999999999999999999764 5799999999999999999999999998777543
No 20
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=8.9e-19 Score=158.03 Aligned_cols=73 Identities=30% Similarity=0.609 Sum_probs=68.5
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSE 274 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~ 274 (644)
...|||+||||+++|+.+|||+|||+|++++|||+++.++.+.++|++|++||++|+||.+|+.||.+|..+.
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 4689999999999999999999999999999999998778899999999999999999999999999986544
No 21
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.73 E-value=2.2e-18 Score=143.64 Aligned_cols=67 Identities=48% Similarity=0.856 Sum_probs=62.1
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCC
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGA 271 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~ 271 (644)
...|||++|||+++|+.++||+|||+|++++|||++++. .++|++|++||++|+||.+|+.||.+|+
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 457999999999999999999999999999999998753 6899999999999999999999999986
No 22
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=1.5e-18 Score=153.34 Aligned_cols=73 Identities=48% Similarity=0.752 Sum_probs=65.1
Q ss_pred cChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHhhhhhhhhcCcccccccccccCCccccc
Q psy11884 204 KDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTD-PNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQM 276 (644)
Q Consensus 204 ~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~-~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~~ 276 (644)
.|||+||||+++|+.+|||+|||+|++++|||+++.. +.++++|++|++||++|+||.+|+.||.+|.++...
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999998765 458899999999999999999999999999776653
No 23
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.71 E-value=5e-18 Score=147.97 Aligned_cols=71 Identities=30% Similarity=0.637 Sum_probs=65.2
Q ss_pred CCccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHhhhhhhhhcCcccccccccccCC
Q psy11884 201 LKRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTD------PNASKKFHEVSEAYEVLSDDTKRQEYDTWGA 271 (644)
Q Consensus 201 ~~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~------~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~ 271 (644)
+...|||+||||+++|+.+|||+|||+|++++|||+++.+ +.+.++|++|++||++|+||.+|+.||.+..
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4578999999999999999999999999999999998743 4689999999999999999999999998754
No 24
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.66 E-value=2.9e-17 Score=161.44 Aligned_cols=72 Identities=42% Similarity=0.819 Sum_probs=68.5
Q ss_pred cChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcccc
Q psy11884 204 KDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQ 275 (644)
Q Consensus 204 ~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~ 275 (644)
.|||++|||+++|+.+|||+|||+|++++|||++++++++.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 589999999999999999999999999999999987788999999999999999999999999999987664
No 25
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.65 E-value=2.4e-17 Score=147.81 Aligned_cols=70 Identities=31% Similarity=0.576 Sum_probs=64.9
Q ss_pred CccChhhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHhhhhhhhhcCcccccccccccCC
Q psy11884 202 KRKDYYQILGISKNS-SAKEIKKAYYELAKKYHPDTNKT---DPNASKKFHEVSEAYEVLSDDTKRQEYDTWGA 271 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~a-s~~eIKkaYRkLa~~~HPDk~~~---~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~ 271 (644)
...|||+||||+++| +.+|||+|||+|++++|||++++ .+.+.++|++|++||++|+||.+|+.||.++.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 457999999999999 99999999999999999999875 35689999999999999999999999999874
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.8e-16 Score=137.60 Aligned_cols=62 Identities=32% Similarity=0.511 Sum_probs=58.3
Q ss_pred ccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCccccccc
Q psy11884 203 RKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQE 265 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~ 265 (644)
..|||+||||+++|+.+|||+|||+|++++|||+++. +.+.++|++|++||++|+|+.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4699999999999999999999999999999999975 6789999999999999999999874
No 27
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.61 E-value=3e-16 Score=149.07 Aligned_cols=70 Identities=33% Similarity=0.676 Sum_probs=64.0
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHhhhhhhhhcCcccccccccccCC
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDP------NASKKFHEVSEAYEVLSDDTKRQEYDTWGA 271 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~------~a~e~f~~I~~AYevLsd~~kR~~YD~~G~ 271 (644)
...|||+||||+++|+.++||+|||+|++++|||+++..+ .|.++|++|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 5679999999999999999999999999999999987653 378999999999999999999999998653
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.58 E-value=1.4e-16 Score=144.35 Aligned_cols=68 Identities=21% Similarity=0.447 Sum_probs=62.4
Q ss_pred ccChhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCccc
Q psy11884 203 RKDYYQILGISKNSSA--KEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSE 274 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as~--~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~ 274 (644)
..++|+||||+++|+. ++||+|||+||+++|||+++. .++|++|++||++|+||.+|+.||.+|..+.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~ 76 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWD 76 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhcccccc
Confidence 4689999999999999 999999999999999999875 4799999999999999999999999886443
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.57 E-value=6.3e-16 Score=133.78 Aligned_cols=64 Identities=20% Similarity=0.236 Sum_probs=58.7
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHhhhhhhhhcCccccccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTD-PNASKKFHEVSEAYEVLSDDTKRQE 265 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~-~~a~e~f~~I~~AYevLsd~~kR~~ 265 (644)
...++|+||||+++|+.+|||+|||+|+++||||+++++ +.|+++|++|++||++|+|...|..
T Consensus 14 ~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred cHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 567999999999999999999999999999999999876 3589999999999999999887743
No 30
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.57 E-value=7.8e-16 Score=130.50 Aligned_cols=65 Identities=14% Similarity=0.320 Sum_probs=58.4
Q ss_pred ccChhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCc
Q psy11884 203 RKDYYQILGISKN--SSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGAT 272 (644)
Q Consensus 203 ~~d~Y~vLGv~~~--as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~ 272 (644)
..++|++|||+++ ++.++||+|||+|++++|||++++ .++|++|++||++|+|+.+|.. |.||..
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~ 76 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR-MNLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence 4689999999999 999999999999999999999864 5899999999999999999987 456653
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.55 E-value=4.1e-16 Score=150.65 Aligned_cols=66 Identities=21% Similarity=0.457 Sum_probs=58.7
Q ss_pred ccChhhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCc
Q psy11884 203 RKDYYQILGISKNSS--AKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGAT 272 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as--~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~ 272 (644)
..|+|++|||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||++|..
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~~ 77 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 77 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGGC
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCCc
Confidence 468999999999999 6999999999999999999875 37899999999999999999999999963
No 32
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.52 E-value=4.3e-15 Score=143.99 Aligned_cols=67 Identities=24% Similarity=0.505 Sum_probs=61.2
Q ss_pred ccChhhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHhhhhhhhhcCccccccccccc
Q psy11884 203 RKDYYQILGISKNSS--AKEIKKAYYELAKKYHPDTNKTDPN-----ASKKFHEVSEAYEVLSDDTKRQEYDTW 269 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as--~~eIKkaYRkLa~~~HPDk~~~~~~-----a~e~f~~I~~AYevLsd~~kR~~YD~~ 269 (644)
..|||++|||+++++ .++||+|||+|++++|||++++.+. |.++|+.|++||++|+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 469999999999998 9999999999999999999876543 779999999999999999999999973
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.51 E-value=8e-15 Score=121.74 Aligned_cols=60 Identities=20% Similarity=0.314 Sum_probs=53.5
Q ss_pred CCccChhhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccc
Q psy11884 201 LKRKDYYQILGISK-NSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQ 264 (644)
Q Consensus 201 ~~~~d~Y~vLGv~~-~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~ 264 (644)
+...++|+||||++ +++.+|||+|||+|++++|||++++ .++|++|++||++|+|+..|+
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhcC
Confidence 34579999999999 7999999999999999999999743 479999999999999987663
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.50 E-value=4.1e-15 Score=144.55 Aligned_cols=64 Identities=20% Similarity=0.423 Sum_probs=59.6
Q ss_pred ccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHhhhhhhhhcCcccccccc
Q psy11884 203 RKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPN---ASKKFHEVSEAYEVLSDDTKRQEY 266 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~---a~e~f~~I~~AYevLsd~~kR~~Y 266 (644)
..|+|++|||+++|+.+|||+|||+|++++|||++++.+. |+++|++|++||++|+|+.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999999876543 889999999999999999999987
No 35
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.49 E-value=8.1e-15 Score=141.65 Aligned_cols=66 Identities=21% Similarity=0.459 Sum_probs=60.9
Q ss_pred ChhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHhhhhhhhhcCcccccccccccC
Q psy11884 205 DYYQILGISKNS--SAKEIKKAYYELAKKYHPDTNKTDPN-----ASKKFHEVSEAYEVLSDDTKRQEYDTWG 270 (644)
Q Consensus 205 d~Y~vLGv~~~a--s~~eIKkaYRkLa~~~HPDk~~~~~~-----a~e~f~~I~~AYevLsd~~kR~~YD~~G 270 (644)
|||++|||++++ +.++||+|||+|+++||||++++.+. |.++|+.|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 99999999999999999999876543 6689999999999999999999999754
No 36
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.47 E-value=5.8e-15 Score=128.62 Aligned_cols=56 Identities=20% Similarity=0.390 Sum_probs=51.8
Q ss_pred cChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHhhhhhhhhcCc
Q psy11884 204 KDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDP---NASKKFHEVSEAYEVLSD 259 (644)
Q Consensus 204 ~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~---~a~e~f~~I~~AYevLsd 259 (644)
.++|++|||+++||.+|||+|||+||+++|||++++++ .|+++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999998754 388999999999999975
No 37
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.46 E-value=2.1e-14 Score=142.74 Aligned_cols=66 Identities=21% Similarity=0.388 Sum_probs=59.9
Q ss_pred ccChhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHhhhhhhhhcCcccccccccc
Q psy11884 203 RKDYYQILGISKN--SSAKEIKKAYYELAKKYHPDTNKTDP-----NASKKFHEVSEAYEVLSDDTKRQEYDT 268 (644)
Q Consensus 203 ~~d~Y~vLGv~~~--as~~eIKkaYRkLa~~~HPDk~~~~~-----~a~e~f~~I~~AYevLsd~~kR~~YD~ 268 (644)
..|||++|||+++ ++.++||+|||+|++++|||++++.+ .|.++|++|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5699999999986 79999999999999999999987643 267899999999999999999999995
No 38
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.45 E-value=7.2e-15 Score=170.83 Aligned_cols=76 Identities=39% Similarity=0.768 Sum_probs=40.9
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcccccccccccCCcccccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTWGATSEQMS 277 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~G~~~~~~~ 277 (644)
...|||++|||+++||.+|||+|||+||+++|||+++++++|.++|++|++||++|+||.+|+.||++|.++...+
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 5689999999999999999999999999999999998778899999999999999999999999999998877543
No 39
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.42 E-value=4.6e-14 Score=118.98 Aligned_cols=78 Identities=35% Similarity=0.764 Sum_probs=69.8
Q ss_pred CceEEEEeeeeecCCCCCcccccCCCccccCCCCCCcceEEeeecCceeeeecCCCCceeEEEeeccccCCCCceeEE
Q psy11884 395 GGYKEVDVNVIDICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYIKFPCQNCDGMGQNIQ 472 (644)
Q Consensus 395 G~~k~i~v~~~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~e 472 (644)
|++++|.|++.+.|+.|+|+|..++....+|+.|+|+|.++...|++.++.+|+.|+|.|+++.++|+.|+|.|.+.+
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER 78 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence 567788899999999999999988877789999999998766568888888999999999999999999999998753
No 40
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.42 E-value=2.2e-14 Score=128.21 Aligned_cols=59 Identities=17% Similarity=0.248 Sum_probs=52.2
Q ss_pred CccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----HHHHHHHhhhhhhhhcCccc
Q psy11884 202 KRKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKT---DP----NASKKFHEVSEAYEVLSDDT 261 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~---~~----~a~e~f~~I~~AYevLsd~~ 261 (644)
...|||++||++. ||.++||+|||+||+++|||++++ ++ .|+++|++|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3469999999996 999999999999999999999763 12 47899999999999999985
No 41
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.40 E-value=5.3e-14 Score=137.10 Aligned_cols=65 Identities=22% Similarity=0.447 Sum_probs=59.0
Q ss_pred CccChhhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCccccccccccc
Q psy11884 202 KRKDYYQIL------GISK-NSSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDDTKRQEYDTW 269 (644)
Q Consensus 202 ~~~d~Y~vL------Gv~~-~as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~~kR~~YD~~ 269 (644)
...|||++| |+++ +|+.++||+|||+|++++|||++++ +.++|++|++||++|+||.+|+.||..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 357999999 4665 9999999999999999999999875 578999999999999999999999973
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.21 E-value=4.7e-12 Score=129.09 Aligned_cols=116 Identities=22% Similarity=0.336 Sum_probs=85.2
Q ss_pred ccccCCCCCCcceEEeeecCceeeeecCCCCceeEE------------EeeccccCCCCceeEEEEEEEEeeCCCCCCCC
Q psy11884 421 KSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIY------------IKFPCQNCDGMGQNIQRRTVSIPIPQGIEDGQ 488 (644)
Q Consensus 421 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~------------i~~~C~~C~G~G~v~e~~~l~V~IPpGv~dG~ 488 (644)
+...|+.|+|+|.. +.. ..+|+.|+|+|.+ +...|+.|+|.|.+..
T Consensus 37 r~~~C~~C~G~G~~-----~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~---------------- 94 (248)
T 1nlt_A 37 KQILCKECEGRGGK-----KGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID---------------- 94 (248)
T ss_dssp EEEECTTTTTCSBS-----TTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC----------------
T ss_pred EEEeCCCCcCccCC-----CCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEec----------------
Confidence 46799999999964 223 3789999999975 4568999999996520
Q ss_pred EEEEecCCceEEEEEEeecCCCccccCCCeEEEEecCHhHhhcCCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcCCCcCC
Q psy11884 489 TIRFPIGQDQIFVTFQVIPSSRYHRDQSDIHTEESISISQAILGGTINVEGIYGDTLSVEIQPGTSSHTKIKIPYKGLKN 568 (644)
Q Consensus 489 ~I~~~g~ggDL~v~i~vkph~~F~R~G~DL~~~~~Isl~eALlG~~~~I~tLdG~~l~V~IppG~~~g~~irI~GeG~P~ 568 (644)
..-...-|.+.-.+.. .+.|+|+||||+.+|++|+++|+|-+.
T Consensus 95 -----------------------------------~~~~C~~C~G~g~~~~--~~~l~V~Ip~G~~~G~~ir~~g~G~~~ 137 (248)
T 1nlt_A 95 -----------------------------------PKDRCKSCNGKKVENE--RKILEVHVEPGMKDGQRIVFKGEADQA 137 (248)
T ss_dssp -----------------------------------TTSBCSSSTTSCEEEE--EEEEEEEECTTCCTTCEEEETTCSCCC
T ss_pred -----------------------------------cCCCCcccCCCceEee--eEEEEEEECCCccCCCEEEEeeeecCC
Confidence 0112233444444432 256899999999999999999999986
Q ss_pred CCCCCCccEEEEEEEECCCCCCHHHHHH
Q psy11884 569 RNSSGYGHHFVHVKIEVPRYPSEKQKDL 596 (644)
Q Consensus 569 ~~~~~rGDL~V~f~V~fP~~Ls~~q~~l 596 (644)
.+. ..|||||+|+|.-.+.+..+..+|
T Consensus 138 ~~g-~~GDl~v~i~v~~h~~F~R~G~DL 164 (248)
T 1nlt_A 138 PDV-IPGDVVFIVSERPHKSFKRDGDDL 164 (248)
T ss_dssp TTC-BCCCEEEEEEECCCSSCEEETTEE
T ss_pred CCC-CcceEEEEEEEecCccceeeCCEE
Confidence 543 689999999999877766555443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.70 E-value=6.5e-09 Score=109.25 Aligned_cols=66 Identities=44% Similarity=0.790 Sum_probs=56.3
Q ss_pred ccChhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHhhhhhhhhcCcccccccccc
Q psy11884 203 RKDYYQILGISKNSSAKEIKKAYYELAKKYHPDTNKTD---PNASKKFHEVSEAYEVLSDDTKRQEYDT 268 (644)
Q Consensus 203 ~~d~Y~vLGv~~~as~~eIKkaYRkLa~~~HPDk~~~~---~~a~e~f~~I~~AYevLsd~~kR~~YD~ 268 (644)
..++|++||+.+.++.++|+++|+++++++|||+.+.+ +.++++|++|++||++|+|+++|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 34899999999999999999999999999999998763 2488999999999999999999999996
No 44
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.64 E-value=1.4e-08 Score=82.73 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=46.8
Q ss_pred ccChhhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhhcCcc
Q psy11884 203 RKDYYQILGISKN---SSAKEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEVLSDD 260 (644)
Q Consensus 203 ~~d~Y~vLGv~~~---as~~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYevLsd~ 260 (644)
..+.|.||||+++ ++.++|+++||+|...+|||++++ .-...+|++|++.|...
T Consensus 3 ~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 3 LDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 3578999999999 999999999999999999999764 35567899999998643
No 45
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.64 E-value=7.1e-08 Score=92.81 Aligned_cols=80 Identities=13% Similarity=0.143 Sum_probs=67.0
Q ss_pred CCeEEEEecCHhHhhcCCEEEEEee--------eCcEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCccEEEEEEEECCC
Q psy11884 516 SDIHTEESISISQAILGGTINVEGI--------YGDTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFVHVKIEVPR 587 (644)
Q Consensus 516 ~DL~~~~~Isl~eALlG~~~~I~tL--------dG~~l~V~IppG~~~g~~irI~GeG~P~~~~~~rGDL~V~f~V~fP~ 587 (644)
.|+.+++.|||.||+.|++++|... ..+.++|+||+|+.+|++++++|+|-+...+...|||||+|+|.-++
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~ 80 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP 80 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCC
Confidence 3789999999999999999888643 22679999999999999999999998765566789999999999877
Q ss_pred CCCHHHHH
Q psy11884 588 YPSEKQKD 595 (644)
Q Consensus 588 ~Ls~~q~~ 595 (644)
.+..+..+
T Consensus 81 ~F~R~G~D 88 (170)
T 1c3g_A 81 NFKRDGDD 88 (170)
T ss_dssp SEEEETTE
T ss_pred ccEEeCCc
Confidence 65544433
No 46
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.63 E-value=8.5e-08 Score=93.10 Aligned_cols=81 Identities=14% Similarity=0.179 Sum_probs=67.4
Q ss_pred CCCeEEEEecCHhHhhcCCEEEEEee-----------eCcEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCccEEEEEEE
Q psy11884 515 QSDIHTEESISISQAILGGTINVEGI-----------YGDTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFVHVKI 583 (644)
Q Consensus 515 G~DL~~~~~Isl~eALlG~~~~I~tL-----------dG~~l~V~IppG~~~g~~irI~GeG~P~~~~~~rGDL~V~f~V 583 (644)
|.|+.+++.|||.||+.|++++|... ..+.++|+||+|+.+|++|+++|+|-+...+...|||||+|++
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~ 82 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQT 82 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEE
Confidence 78999999999999999999888643 2467999999999999999999999874335578999999999
Q ss_pred ECCCCCCHHHHH
Q psy11884 584 EVPRYPSEKQKD 595 (644)
Q Consensus 584 ~fP~~Ls~~q~~ 595 (644)
.-++.+..+..+
T Consensus 83 ~~h~~F~R~G~D 94 (180)
T 2q2g_A 83 KTHPRFTRDDCH 94 (180)
T ss_dssp CCCSSCEEETTE
T ss_pred EecccEEEcCCE
Confidence 987776655443
No 47
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.56 E-value=1.1e-07 Score=100.66 Aligned_cols=81 Identities=16% Similarity=0.229 Sum_probs=63.3
Q ss_pred ccCCCeEEEEecCHhHhhcCCEEEEEee------e-------CcEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCccEEE
Q psy11884 513 RDQSDIHTEESISISQAILGGTINVEGI------Y-------GDTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFV 579 (644)
Q Consensus 513 R~G~DL~~~~~Isl~eALlG~~~~I~tL------d-------G~~l~V~IppG~~~g~~irI~GeG~P~~~~~~rGDL~V 579 (644)
+.|.||.+.+.|+|.||+.|++..|..- . .+.|+|+||||+++|++|+++|+|.|..++...|||||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v 217 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWL 217 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEE
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEE
Confidence 4678888888888888888877666432 1 35689999999999999999999999766667899999
Q ss_pred EEEEECCCCCCHHH
Q psy11884 580 HVKIEVPRYPSEKQ 593 (644)
Q Consensus 580 ~f~V~fP~~Ls~~q 593 (644)
+|+|.-++.+..+.
T Consensus 218 ~I~v~~h~~F~R~G 231 (329)
T 3lz8_A 218 VIHIAPHPLFDIVG 231 (329)
T ss_dssp EECCCCCSSCEEET
T ss_pred EEEEecCCccEEcC
Confidence 99998776654433
No 48
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.54 E-value=2.4e-07 Score=90.01 Aligned_cols=80 Identities=19% Similarity=0.210 Sum_probs=64.3
Q ss_pred CCCeEEEEecCHhHhhcCCEEEEEeee------C-------cEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCccEEEEE
Q psy11884 515 QSDIHTEESISISQAILGGTINVEGIY------G-------DTLSVEIQPGTSSHTKIKIPYKGLKNRNSSGYGHHFVHV 581 (644)
Q Consensus 515 G~DL~~~~~Isl~eALlG~~~~I~tLd------G-------~~l~V~IppG~~~g~~irI~GeG~P~~~~~~rGDL~V~f 581 (644)
|.|+.+++.|||.||+.|++++|.... | +.++|+||+|+.+|++|+++|+|-+..+ ...|||||+|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~-g~~GDl~v~i 80 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN-NIPADIVFVL 80 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS-SCCCCEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC-CCcccEEEEE
Confidence 578999999999999999998886431 3 5689999999999999999999998654 4789999999
Q ss_pred EEECCCCCCHHHHH
Q psy11884 582 KIEVPRYPSEKQKD 595 (644)
Q Consensus 582 ~V~fP~~Ls~~q~~ 595 (644)
+|.-++.+..+..+
T Consensus 81 ~~~~h~~F~R~G~D 94 (181)
T 3agx_A 81 KDKPHNIFKRDGSD 94 (181)
T ss_dssp EECCCSSCEEETTE
T ss_pred EEeccccceeeCCc
Confidence 99987776655433
No 49
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=97.61 E-value=6.5e-05 Score=67.06 Aligned_cols=31 Identities=19% Similarity=0.545 Sum_probs=26.2
Q ss_pred EEEeeCCCCCCCCEEEEecCC-------ceEEEEEEee
Q psy11884 476 VSIPIPQGIEDGQTIRFPIGQ-------DQIFVTFQVI 506 (644)
Q Consensus 476 l~V~IPpGv~dG~~I~~~g~g-------gDL~v~i~vk 506 (644)
++|.||+|+++|++++++|.| |||+|+|+|.
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~~~GDL~v~~~V~ 77 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIV 77 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSSCBCCEEEEEEEC
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCCCCcCEEEEEEEE
Confidence 579999999999999999864 6777777765
No 50
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.55 E-value=3.8e-05 Score=64.14 Aligned_cols=47 Identities=36% Similarity=0.715 Sum_probs=37.9
Q ss_pred CccccCCCCCCcceEEeeecCceeeeecCCCCceeEEEe--------eccccCCCCceeE
Q psy11884 420 TKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYIK--------FPCQNCDGMGQNI 471 (644)
Q Consensus 420 ~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~ 471 (644)
.+...|+.|+|+|.. +.....+|+.|+|+|.++. .+|+.|+|.|.+.
T Consensus 9 ~~~~~C~~C~G~G~~-----~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~ 63 (79)
T 1exk_A 9 PTLEECDVCHGSGAK-----PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI 63 (79)
T ss_dssp CCEEECGGGTTTSBC-----SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC
T ss_pred ccceECCCCcccccC-----CCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC
Confidence 457899999999963 2334578999999998864 5899999999763
No 51
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.48 E-value=3.2e-05 Score=60.42 Aligned_cols=30 Identities=40% Similarity=0.791 Sum_probs=27.0
Q ss_pred eeeecCCCCceeEEEeeccccCCCCceeEE
Q psy11884 443 MKTTCRYCSGSGIYIKFPCQNCDGMGQNIQ 472 (644)
Q Consensus 443 ~~~~C~~C~G~G~~i~~~C~~C~G~G~v~e 472 (644)
++++|+.|+|+|.++.++|+.|+|.|.+.+
T Consensus 8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 8 LETTCPNCNGSGREEPEPCPKCLGKGVILT 37 (53)
T ss_dssp HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence 467999999999999999999999998754
No 52
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.00035 Score=63.38 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=29.1
Q ss_pred EEEEeeCCC--CCCCCEEEEecCC---------ceEEEEEEeecCC
Q psy11884 475 TVSIPIPQG--IEDGQTIRFPIGQ---------DQIFVTFQVIPSS 509 (644)
Q Consensus 475 ~l~V~IPpG--v~dG~~I~~~g~g---------gDL~v~i~vkph~ 509 (644)
.++|.|||| +++|++++++|.| |||||+++|.-..
T Consensus 35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~ 80 (121)
T 1xao_A 35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPE 80 (121)
T ss_dssp EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCC
T ss_pred EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence 567999999 9999999999753 7899999887443
No 53
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.04 E-value=0.00039 Score=61.19 Aligned_cols=47 Identities=34% Similarity=0.755 Sum_probs=36.0
Q ss_pred CCccccCCCCCCcceEEeeecCceeeeecCCCCceeEEE--------eeccccCCCCcee
Q psy11884 419 GTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYI--------KFPCQNCDGMGQN 470 (644)
Q Consensus 419 g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i--------~~~C~~C~G~G~v 470 (644)
-.+...|+.|+|+|.. +.....+|+.|+|+|.+. ..+|+.|.|.|.+
T Consensus 25 ~~~~~~C~~C~G~G~~-----~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~ 79 (104)
T 2ctt_A 25 VNIMDTCERCNGKGNE-----PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI 79 (104)
T ss_dssp SSCCEECSSSSSSSSC-----TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE
T ss_pred eeeeeECCCCcCCccC-----CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE
Confidence 3456899999999953 333456899999999763 3589999999965
No 54
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.04 E-value=6.8e-06 Score=93.87 Aligned_cols=73 Identities=16% Similarity=0.301 Sum_probs=57.4
Q ss_pred EEEecCHHHHhcCceEEEEeeeeecCCCCCcccccCCC---ccccCCCCCCcceEE------------eeecCc-eeeee
Q psy11884 383 VILKIDFETAARGGYKEVDVNVIDICPKCRGTRCELGT---KSVRCTYCQGSGYET------------TTTGPF-IMKTT 446 (644)
Q Consensus 383 v~L~vTLeEa~~G~~k~i~v~~~~~C~~C~GtG~~~g~---~~~~C~~C~G~G~~~------------~~~G~~-~~~~~ 446 (644)
+.+.|+|+|++.|+++++.+.+...|..|+|+|++.|. ...+|+.|+|+.... +..|.| .....
T Consensus 169 ~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~~ 248 (669)
T 3pmq_A 169 TNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSISN 248 (669)
T ss_dssp CCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTTC
T ss_pred EEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccCc
Confidence 56788999999999999999999999999999999987 678999999994110 011222 22457
Q ss_pred cCCCCceeE
Q psy11884 447 CRYCSGSGI 455 (644)
Q Consensus 447 C~~C~G~G~ 455 (644)
|..|+..+.
T Consensus 249 C~~CH~~~~ 257 (669)
T 3pmq_A 249 CQTCHADNP 257 (669)
T ss_dssp CTTTSCCCT
T ss_pred chhhcCCcc
Confidence 888888775
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.73 E-value=0.00052 Score=53.52 Aligned_cols=28 Identities=29% Similarity=0.717 Sum_probs=18.6
Q ss_pred eeecCCCCceeEEEeeccccCCCCceeE
Q psy11884 444 KTTCRYCSGSGIYIKFPCQNCDGMGQNI 471 (644)
Q Consensus 444 ~~~C~~C~G~G~~i~~~C~~C~G~G~v~ 471 (644)
..+|+.|+|+|.++..+|+.|+|.|.+.
T Consensus 9 ~~~C~~C~GsG~~~~~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 9 EVACPKCERAGEIEGTPCPACSGKGVIL 36 (53)
T ss_dssp EEECTTTTTSSEETTEECTTTTTSSEEE
T ss_pred cccCCCCcceeccCCCCCccCCCCccEE
Confidence 4466666666666666777777777653
No 56
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=95.14 E-value=0.007 Score=47.13 Aligned_cols=27 Identities=33% Similarity=0.687 Sum_probs=14.2
Q ss_pred ecCCCCCcccccCCCccccCCCCCCcceEE
Q psy11884 406 DICPKCRGTRCELGTKSVRCTYCQGSGYET 435 (644)
Q Consensus 406 ~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~ 435 (644)
..|+.|+|+|.... .+|+.|+|+|.+.
T Consensus 10 ~~C~~C~GsG~~~~---~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 10 VACPKCERAGEIEG---TPCPACSGKGVIL 36 (53)
T ss_dssp EECTTTTTSSEETT---EECTTTTTSSEEE
T ss_pred ccCCCCcceeccCC---CCCccCCCCccEE
Confidence 35666666665432 3455555555443
No 57
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=94.82 E-value=0.0097 Score=46.32 Aligned_cols=28 Identities=32% Similarity=0.682 Sum_probs=16.6
Q ss_pred eecCCCCCcccccCCCccccCCCCCCcceEE
Q psy11884 405 IDICPKCRGTRCELGTKSVRCTYCQGSGYET 435 (644)
Q Consensus 405 ~~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~ 435 (644)
...|+.|+|+|.... .+|+.|+|+|.+.
T Consensus 9 ~~~C~~C~GsG~~i~---~~C~~C~G~G~v~ 36 (53)
T 3lcz_A 9 ETTCPNCNGSGREEP---EPCPKCLGKGVIL 36 (53)
T ss_dssp EEECTTTTTSCEETT---EECTTTTTSSEEE
T ss_pred eccCcCCcccccCCC---CcCCCCCCcEEEE
Confidence 345777777765432 4566666666543
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=75.63 E-value=0.98 Score=51.31 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=37.0
Q ss_pred CccChhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHhhhhhhhh
Q psy11884 202 KRKDYYQILGISKNSSA--KEIKKAYYELAKKYHPDTNKTDPNASKKFHEVSEAYEV 256 (644)
Q Consensus 202 ~~~d~Y~vLGv~~~as~--~eIKkaYRkLa~~~HPDk~~~~~~a~e~f~~I~~AYev 256 (644)
..+|||.+||++.+... .+|++|||+||+..+++ .++++.+..|+.|
T Consensus 627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 45679999999776655 67999999999965544 4678888888875
No 59
>2ou3_A Tellurite resistance protein of COG3793; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE I3A; 1.85A {Nostoc punctiforme} SCOP: a.287.1.1
Probab=68.66 E-value=1.2 Score=41.55 Aligned_cols=50 Identities=6% Similarity=0.030 Sum_probs=43.1
Q ss_pred eeeeeeccCCCCCccchhhhccHHHHHHHHHHHHHhCCChhhHhhhHhhhhhhccc
Q psy11884 120 FYSIQTSPQGSVGSGLMKTLVLQKVLTMILSLKAVIRVPPRLFSSFKYGALQLNRF 175 (644)
Q Consensus 120 ~~~~~~s~~~~~~~~~~~~~l~~~e~~~L~~vaai~~i~~~~~~~l~~~~~~~~R~ 175 (644)
++++..+.+.++|. +++.|..+|+.|+..|++++..+..+..++....++
T Consensus 97 ~l~~l~~vA~ADG~------~~~~E~~~L~~iA~~Lgls~~~~~~l~~~~~~~~~~ 146 (161)
T 2ou3_A 97 ILLSAIWVSAADGE------LHEKEKAKIRKMATILGIKEEIVDQLEQLYYYEAAL 146 (161)
T ss_dssp HHHHHHHHHHTTSS------CCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC------CCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 67777788888887 999999999999999999999999998777666554
No 60
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=58.18 E-value=21 Score=38.43 Aligned_cols=27 Identities=4% Similarity=0.031 Sum_probs=18.3
Q ss_pred CCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcC
Q psy11884 532 GGTINVEGIYGDTLSVEIQPGTSSHTKIKIPY 563 (644)
Q Consensus 532 G~~~~I~tLdG~~l~V~IppG~~~g~~irI~G 563 (644)
.+++.||.| .+.|+||+..|..-.|.|
T Consensus 294 ta~i~IPEL-----~lei~pg~~~G~~TTVEG 320 (404)
T 2qkd_A 294 TCSVEIPEL-----EFELGMAVLGGKFTTLEG 320 (404)
T ss_dssp TCEEEEGGG-----TEEECTTTTCSEEEEHHH
T ss_pred ceEEEeeee-----eEEecCCCCCceEEeHHH
Confidence 357778765 578899987665555543
No 61
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=47.39 E-value=21 Score=38.52 Aligned_cols=27 Identities=11% Similarity=0.098 Sum_probs=19.5
Q ss_pred CCEEEEEeeeCcEEEEEeCCCCCCCcEEEEcC
Q psy11884 532 GGTINVEGIYGDTLSVEIQPGTSSHTKIKIPY 563 (644)
Q Consensus 532 G~~~~I~tLdG~~l~V~IppG~~~g~~irI~G 563 (644)
.+++.||.| .+.||||++.|..-.|.|
T Consensus 86 tati~IPEL-----~~eI~pg~~~G~iTTVEG 112 (404)
T 2qkd_A 86 SATTRIPEL-----DFEIPAFSQKGALTTVEG 112 (404)
T ss_dssp TCEEEEGGG-----TEEECTTSSCCEEEEHHH
T ss_pred CcEEEeeee-----eEEecCccCCceEEeHHH
Confidence 357778766 578899988787666654
No 62
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=41.63 E-value=20 Score=32.20 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=34.8
Q ss_pred ceeeeeeeccCCCCCccchhhhccHHHHHHHHHHHHHhCCChhhHhhh
Q psy11884 118 KCFYSIQTSPQGSVGSGLMKTLVLQKVLTMILSLKAVIRVPPRLFSSF 165 (644)
Q Consensus 118 ~~~~~~~~s~~~~~~~~~~~~~l~~~e~~~L~~vaai~~i~~~~~~~l 165 (644)
.-++++....+.+||. +++.|..+|+.|+.+||+++..+...
T Consensus 85 ~~ll~~L~~IA~ADG~------i~~~E~~lLr~ia~~Lgls~~d~~~~ 126 (133)
T 2h5n_A 85 KYVASYLGVIMASDGD------IDDNELALWTLISTLCGLPTMTVMEA 126 (133)
T ss_dssp HHHHHHHHHHSCBTTB------CCHHHHHHHHHHHHHHTCCCCCHHHH
T ss_pred HHHHHHHHHHhhcCCC------CCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3455666777788888 99999999999999999999998443
No 63
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=39.74 E-value=43 Score=33.82 Aligned_cols=15 Identities=20% Similarity=0.333 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHhh
Q psy11884 588 YPSEKQKDLVREFFS 602 (644)
Q Consensus 588 ~Ls~~q~~lL~~l~~ 602 (644)
.+|+++.+.+++|++
T Consensus 255 ~~t~ed~~~i~~ls~ 269 (279)
T 1ltl_A 255 QISEEDEEKIKELAG 269 (279)
T ss_dssp ---------------
T ss_pred CCCHHHHHHHHHHhc
Confidence 467777777777764
No 64
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=30.52 E-value=1.1e+02 Score=26.93 Aligned_cols=74 Identities=15% Similarity=0.175 Sum_probs=46.2
Q ss_pred cceeEEEEEEcCCCcchHHHHHhHHHHHhhhccceeeeecceEEEeec--c--------CC--------c--ceeeeeee
Q psy11884 66 NSQSYVFFYEESDGLTYSSIRQTAKELQRFRNYGQFRLFDTKIAISSC--N--------VT--------K--KCFYSIQT 125 (644)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~--------~--~~~~~~~~ 125 (644)
+...+++.|.-++.-++..+....+++...+.+.. .+..|+|-.. - +. + ....+||+
T Consensus 72 ~~d~~ilv~D~~~~~s~~~~~~~~~~i~~~~~~~~---~~~piilv~nK~Dl~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 2iwr_A 72 WADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGR---GGLALALVGTQDRISASSPRVVGDARARALXADMKRCSYYET 148 (178)
T ss_dssp HCSEEEEEEETTCHHHHHHHHHHHHHHHHHHCSSS---CCCEEEEEEECTTCBTTBCCCSCHHHHHHHHHHHSSEEEEEE
T ss_pred hCCEEEEEEECcCHHHHHHHHHHHHHHHHHHhcCC---CCCCEEEEEECccccccccCcCCHHHHHHHHHhhcCCeEEEE
Confidence 46678899998888888777776666766655431 1223333221 1 11 1 14678999
Q ss_pred ccCCCCCccchhhhccH
Q psy11884 126 SPQGSVGSGLMKTLVLQ 142 (644)
Q Consensus 126 s~~~~~~~~~~~~~l~~ 142 (644)
||.++.|+.+.+..+..
T Consensus 149 Sa~~~~~i~~lf~~l~~ 165 (178)
T 2iwr_A 149 XATYGLNVDRVFQEVAQ 165 (178)
T ss_dssp BTTTTBTHHHHHHHHHH
T ss_pred eccccCCHHHHHHHHHH
Confidence 99999998655554443
No 65
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=29.56 E-value=40 Score=29.19 Aligned_cols=51 Identities=27% Similarity=0.539 Sum_probs=33.4
Q ss_pred ecCCCCCcccccCCCccccCCCCCCcceEEeeecCceeeeecCCCCceeEEEe------eccccCCC
Q psy11884 406 DICPKCRGTRCELGTKSVRCTYCQGSGYETTTTGPFIMKTTCRYCSGSGIYIK------FPCQNCDG 466 (644)
Q Consensus 406 ~~C~~C~GtG~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------~~C~~C~G 466 (644)
..||.|+-.=...+. .-.|..|+.. +....-||.|+-.=++.+ -.|..|+|
T Consensus 33 ~~CP~Cq~eL~~~g~-~~hC~~C~~~---------f~~~a~CPdC~q~LevLkACGAvdYFC~~chg 89 (101)
T 2jne_A 33 LHCPQCQHVLDQDNG-HARCRSCGEF---------IEMKALCPDCHQPLQVLKACGAVDYFCQHGHG 89 (101)
T ss_dssp CBCSSSCSBEEEETT-EEEETTTCCE---------EEEEEECTTTCSBCEEEEETTEEEEEETTTTE
T ss_pred ccCccCCCcceecCC-EEECccccch---------hhccccCcchhhHHHHHHHhcCcchhhccCCc
Confidence 579999865322222 3468888763 345667999887776643 45788775
No 66
>2jxu_A TERB, KP-TERB; tellurite resistance protein, plasmid, unknown function; NMR {Klebsiella pneumoniae ntuh-k2044}
Probab=27.79 E-value=6.4 Score=35.90 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=34.2
Q ss_pred ceeeeeeeccCCCCCccchhhhccHHHHHHHHHHHHHhCCChhhHhh
Q psy11884 118 KCFYSIQTSPQGSVGSGLMKTLVLQKVLTMILSLKAVIRVPPRLFSS 164 (644)
Q Consensus 118 ~~~~~~~~s~~~~~~~~~~~~~l~~~e~~~L~~vaai~~i~~~~~~~ 164 (644)
..++.+....+.++|. +++.|..+|+.|+..|++++..+..
T Consensus 111 ~~~l~~~~~vA~ADG~------~~~~E~~~L~~ia~~Lgl~~~~~~~ 151 (153)
T 2jxu_A 111 QLALRVGIAVAKSDGN------FDDDEKSAVREIARSLGFDPAEFGL 151 (153)
T ss_dssp HHHHHHHHHHHTTTTS------CSSTHHHHHHHHHHHTTSCSSCCCC
T ss_pred HHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHhCcCHHHHhh
Confidence 3566667777778887 9999999999999999999887654
No 67
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=26.55 E-value=60 Score=28.49 Aligned_cols=40 Identities=13% Similarity=0.226 Sum_probs=22.4
Q ss_pred hcCceEEEEe-eeeecCCCCCcccccCCCccc-cCCCCCCcce
Q psy11884 393 ARGGYKEVDV-NVIDICPKCRGTRCELGTKSV-RCTYCQGSGY 433 (644)
Q Consensus 393 ~~G~~k~i~v-~~~~~C~~C~GtG~~~g~~~~-~C~~C~G~G~ 433 (644)
+.|+...+.. +....|..|.-.-. ...... .||.|++...
T Consensus 60 ~e~a~L~i~~~p~~~~C~~CG~~~e-~~~~~~~~CP~Cgs~~~ 101 (119)
T 2kdx_A 60 CKDAILDIVDEKVELECKDCSHVFK-PNALDYGVCEKCHSKNV 101 (119)
T ss_dssp TSSCCEEEEEECCEEECSSSSCEEC-SCCSTTCCCSSSSSCCC
T ss_pred hcCcEEEEEeccceEEcCCCCCEEe-CCCCCCCcCccccCCCc
Confidence 4455555543 34567888854432 233445 6777766643
No 68
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=24.86 E-value=1.3e+02 Score=29.48 Aligned_cols=28 Identities=14% Similarity=0.398 Sum_probs=21.2
Q ss_pred EEEeeCCCCC---CCCEEEEecCCceEEEEE
Q psy11884 476 VSIPIPQGIE---DGQTIRFPIGQDQIFVTF 503 (644)
Q Consensus 476 l~V~IPpGv~---dG~~I~~~g~ggDL~v~i 503 (644)
..|.||+|+. +|..|.++|..|.|...+
T Consensus 34 ~pI~IP~gV~V~i~~~~VtVKGPkG~L~~~~ 64 (212)
T 1nkw_E 34 QPIAVPSGVTVNAQDGVFKVKGPKGELTVPY 64 (212)
T ss_pred cceecCCCcEEEEeCCEEEEECCCEEEEEEC
Confidence 4678888886 688999999888765544
No 69
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=20.60 E-value=79 Score=32.70 Aligned_cols=46 Identities=17% Similarity=0.502 Sum_probs=29.3
Q ss_pred ccCCCCCCcceEE-eee-c--CceeeeecCCCCceeEEEeeccccCCCCc
Q psy11884 423 VRCTYCQGSGYET-TTT-G--PFIMKTTCRYCSGSGIYIKFPCQNCDGMG 468 (644)
Q Consensus 423 ~~C~~C~G~G~~~-~~~-G--~~~~~~~C~~C~G~G~~i~~~C~~C~G~G 468 (644)
..||.|++.=... +.. | .+.---.|..|+-.=...+..|+.|...+
T Consensus 183 ~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~~ 232 (309)
T 2fiy_A 183 TLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEESK 232 (309)
T ss_dssp SSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCCS
T ss_pred CCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCCC
Confidence 3566665554322 222 2 12234579999888888889999998864
No 70
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=20.17 E-value=1e+02 Score=30.62 Aligned_cols=15 Identities=33% Similarity=0.727 Sum_probs=9.0
Q ss_pred eeeecCCCCceeEEE
Q psy11884 443 MKTTCRYCSGSGIYI 457 (644)
Q Consensus 443 ~~~~C~~C~G~G~~i 457 (644)
....|+.|+..|...
T Consensus 167 ~P~~Cp~C~~~~~~~ 181 (268)
T 2vl6_A 167 MPTICPKCGKPGQFR 181 (268)
T ss_dssp CCSBCTTTCCBCEEE
T ss_pred CCccCCCCCCCCCEE
Confidence 345677777766433
Done!