BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11889
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17972|KCNAW_DROME Potassium voltage-gated channel protein Shaw OS=Drosophila
melanogaster GN=Shaw PE=2 SV=1
Length = 498
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 86/94 (91%)
Query: 1 MHANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVI 60
+ NP NDFNSIPLGLWWALVTMTTVGYGDM PKTY+GMFVGALCALAGVLTIALPVPVI
Sbjct: 353 IQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVI 412
Query: 61 VSNFSRFYSHAQARSKLPKKRRRVLPVEQPRPKR 94
VSNF+ +YSH QAR+KLPKKRRRVLPVEQPR R
Sbjct: 413 VSNFAMYYSHTQARAKLPKKRRRVLPVEQPRQPR 446
>sp|G5EFC3|KCNAG_CAEEL Potassium voltage-gated channel protein egl-36 OS=Caenorhabditis
elegans GN=egl-36 PE=1 SV=1
Length = 558
Score = 154 bits (389), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/91 (76%), Positives = 75/91 (82%)
Query: 1 MHANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVI 60
M ANP N F SIPLGLWWA+ TMTTVGYGDM P T G VG+LCA+ GVLTIALPVPVI
Sbjct: 382 MEANPNNQFQSIPLGLWWAICTMTTVGYGDMTPHTSFGRLVGSLCAVMGVLTIALPVPVI 441
Query: 61 VSNFSRFYSHAQARSKLPKKRRRVLPVEQPR 91
VSNF+ FYSH QAR KLPK+RRRVLPVEQ R
Sbjct: 442 VSNFAMFYSHNQARDKLPKRRRRVLPVEQIR 472
>sp|Q14B80|KCNC2_MOUSE Potassium voltage-gated channel subfamily C member 2 OS=Mus
musculus GN=Kcnc2 PE=1 SV=1
Length = 642
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 69/84 (82%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
A+ F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 419 ASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVN 478
Query: 63 NFSRFYSHAQARSKLPKKRRRVLP 86
NF +YS A A+ KLP+KR++ +P
Sbjct: 479 NFGMYYSLAMAKQKLPRKRKKHIP 502
>sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C member 2 OS=Rattus
norvegicus GN=Kcnc2 PE=1 SV=1
Length = 638
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 69/84 (82%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
A+ F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 415 ASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVN 474
Query: 63 NFSRFYSHAQARSKLPKKRRRVLP 86
NF +YS A A+ KLP+KR++ +P
Sbjct: 475 NFGMYYSLAMAKQKLPRKRKKHIP 498
>sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily C member 2 OS=Homo
sapiens GN=KCNC2 PE=1 SV=1
Length = 638
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 69/84 (82%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
A+ F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 415 ASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVN 474
Query: 63 NFSRFYSHAQARSKLPKKRRRVLP 86
NF +YS A A+ KLP+KR++ +P
Sbjct: 475 NFGMYYSLAMAKQKLPRKRKKHIP 498
>sp|Q63734|KCNC4_RAT Potassium voltage-gated channel subfamily C member 4 OS=Rattus
norvegicus GN=Kcnc4 PE=1 SV=1
Length = 625
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 58/71 (81%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
N DF +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 415 GNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVN 474
Query: 63 NFSRFYSHAQA 73
NF +YS A A
Sbjct: 475 NFGMYYSLAMA 485
>sp|Q8R1C0|KCNC4_MOUSE Potassium voltage-gated channel subfamily C member 4 OS=Mus
musculus GN=Kcnc4 PE=2 SV=1
Length = 628
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 58/71 (81%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
N DF +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 418 GNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVN 477
Query: 63 NFSRFYSHAQA 73
NF +YS A A
Sbjct: 478 NFGMYYSLAMA 488
>sp|Q03721|KCNC4_HUMAN Potassium voltage-gated channel subfamily C member 4 OS=Homo
sapiens GN=KCNC4 PE=1 SV=2
Length = 635
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 58/71 (81%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
N DF +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 414 GNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVN 473
Query: 63 NFSRFYSHAQA 73
NF +YS A A
Sbjct: 474 NFGMYYSLAMA 484
>sp|Q16322|KCA10_HUMAN Potassium voltage-gated channel subfamily A member 10 OS=Homo
sapiens GN=KCNA10 PE=1 SV=2
Length = 511
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
PE+ F+SIP G WWA+VTMTTVGYGDM P T G VG LCA+AGVLTIALPVPVIVSNF
Sbjct: 401 PESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNF 460
Query: 65 SRFY---SHAQARSKLPKKRRRVLPVEQPRPKRGESVNVIN 102
+ FY + + + +P + R+L R +S+N N
Sbjct: 461 NYFYHRETENEEKQNIPGEIERILNSVGSRMGSTDSLNKTN 501
>sp|P25122|KCNC1_RAT Potassium voltage-gated channel subfamily C member 1 OS=Rattus
norvegicus GN=Kcnc1 PE=2 SV=1
Length = 585
Score = 109 bits (272), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/71 (67%), Positives = 58/71 (81%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
A+ F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 378 ASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVN 437
Query: 63 NFSRFYSHAQA 73
NF +YS A A
Sbjct: 438 NFGMYYSLAMA 448
>sp|P15388|KCNC1_MOUSE Potassium voltage-gated channel subfamily C member 1 OS=Mus
musculus GN=Kcnc1 PE=2 SV=1
Length = 511
Score = 109 bits (272), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/71 (67%), Positives = 58/71 (81%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
A+ F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 378 ASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVN 437
Query: 63 NFSRFYSHAQA 73
NF +YS A A
Sbjct: 438 NFGMYYSLAMA 448
>sp|P48547|KCNC1_HUMAN Potassium voltage-gated channel subfamily C member 1 OS=Homo
sapiens GN=KCNC1 PE=2 SV=1
Length = 511
Score = 109 bits (272), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/71 (67%), Positives = 58/71 (81%)
Query: 3 ANPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVS 62
A+ F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVPVIV+
Sbjct: 378 ASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVN 437
Query: 63 NFSRFYSHAQA 73
NF +YS A A
Sbjct: 438 NFGMYYSLAMA 448
>sp|Q7T199|KCA10_CHICK Potassium voltage-gated channel subfamily A member 10 OS=Gallus
gallus GN=KCNA10 PE=2 SV=1
Length = 516
Score = 108 bits (270), Expect = 8e-24, Method: Composition-based stats.
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
P++ F+SIP G WWA+VTMTTVGYGDM P T G VG LCA+AGVLTIALPVPVIVSNF
Sbjct: 406 PQSHFSSIPDGFWWAVVTMTTVGYGDMCPTTLGGKIVGTLCAIAGVLTIALPVPVIVSNF 465
Query: 65 SRFY---SHAQARSKLPKKRRRVLPVEQPRPKRGESVNVIN 102
+ FY + + + LP + R+L ES+N N
Sbjct: 466 NYFYHRETENEEKQILPGEVERILNSVVTGNDSMESLNKTN 506
>sp|Q9I830|KCNA2_ONCMY Potassium voltage-gated channel subfamily A member 2
OS=Oncorhynchus mykiss GN=kcna2 PE=2 SV=1
Length = 494
Score = 106 bits (264), Expect = 5e-23, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 53/64 (82%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
PE+ F SIP WWA+V+MTTVGYGDMVP T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 349 PESQFESIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNF 408
Query: 65 SRFY 68
+ FY
Sbjct: 409 NYFY 412
>sp|Q01956|KCNC3_RAT Potassium voltage-gated channel subfamily C member 3 OS=Rattus
norvegicus GN=Kcnc3 PE=2 SV=1
Length = 889
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 56/65 (86%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF +Y
Sbjct: 488 FKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYY 547
Query: 69 SHAQA 73
S A A
Sbjct: 548 SLAMA 552
>sp|Q63959|KCNC3_MOUSE Potassium voltage-gated channel subfamily C member 3 OS=Mus
musculus GN=Kcnc3 PE=2 SV=2
Length = 769
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 56/65 (86%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF +Y
Sbjct: 487 FKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYY 546
Query: 69 SHAQA 73
S A A
Sbjct: 547 SLAMA 551
>sp|Q14003|KCNC3_HUMAN Potassium voltage-gated channel subfamily C member 3 OS=Homo
sapiens GN=KCNC3 PE=1 SV=3
Length = 757
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 56/65 (86%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF +Y
Sbjct: 487 FKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYY 546
Query: 69 SHAQA 73
S A A
Sbjct: 547 SLAMA 551
>sp|Q9I829|KCNA1_ONCMY Shaker-related potassium channel tsha2 OS=Oncorhynchus mykiss PE=2
SV=1
Length = 483
Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/65 (69%), Positives = 54/65 (83%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
+PE+ F+SIP WWA+V+MTTVGYGDM P T G VG++CA+AGVLTIALPVPVIVSN
Sbjct: 350 DPESGFSSIPAAFWWAVVSMTTVGYGDMCPVTIGGKIVGSMCAIAGVLTIALPVPVIVSN 409
Query: 64 FSRFY 68
F+ FY
Sbjct: 410 FNYFY 414
>sp|Q95L11|KCNB2_RABIT Potassium voltage-gated channel subfamily B member 2 OS=Oryctolagus
cuniculus GN=KCNB2 PE=2 SV=1
Length = 911
Score = 102 bits (255), Expect = 5e-22, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS FY
Sbjct: 365 FTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFY 424
Query: 69 SHAQARSKLPKKRRRVLPVEQPRPKRGESVNVIN 102
Q R + KRR L R KR S+ +N
Sbjct: 425 KE-QKRQEKAIKRREAL----ERAKRNGSIVSMN 453
>sp|Q9MZ19|KCNB1_RABIT Potassium voltage-gated channel subfamily B member 1 OS=Oryctolagus
cuniculus GN=KCNB1 PE=2 SV=1
Length = 858
Score = 102 bits (254), Expect = 6e-22, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
+ F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS
Sbjct: 358 DTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFS 417
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQPRPKRGESVNVINRR 104
FY Q R + KRR L R KR S+ +N +
Sbjct: 418 EFYKE-QKRQEKAIKRREAL----ERAKRNGSIVSMNMK 451
>sp|Q92953|KCNB2_HUMAN Potassium voltage-gated channel subfamily B member 2 OS=Homo
sapiens GN=KCNB2 PE=2 SV=2
Length = 911
Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS FY
Sbjct: 365 FTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFY 424
Query: 69 SHAQARSKLPKKRRRVLPVEQPRPKRGESVNVIN 102
Q R + KRR L R KR S+ +N
Sbjct: 425 KE-QKRQEKAIKRREAL----ERAKRNGSIVSMN 453
>sp|P15384|KCNA3_RAT Potassium voltage-gated channel subfamily A member 3 OS=Rattus
norvegicus GN=Kcna3 PE=1 SV=2
Length = 525
Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/65 (72%), Positives = 53/65 (81%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
+P + FNSIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSN
Sbjct: 373 DPSSGFNSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSN 432
Query: 64 FSRFY 68
F+ FY
Sbjct: 433 FNYFY 437
>sp|Q14721|KCNB1_HUMAN Potassium voltage-gated channel subfamily B member 1 OS=Homo
sapiens GN=KCNB1 PE=1 SV=2
Length = 858
Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
+ F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS
Sbjct: 358 DTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFS 417
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQPRPKRGESVNVINRR 104
FY Q R + KRR L R KR S+ +N +
Sbjct: 418 EFYKE-QKRQEKAIKRREAL----ERAKRNGSIVSMNMK 451
>sp|O18868|KCNB1_PIG Potassium voltage-gated channel subfamily B member 1 OS=Sus scrofa
GN=KCNB1 PE=2 SV=1
Length = 858
Score = 102 bits (254), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
+ F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS
Sbjct: 358 DTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFS 417
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQPRPKRGESVNVINRR 104
FY Q R + KRR L R KR S+ +N +
Sbjct: 418 EFYKE-QKRQEKAIKRREAL----ERAKRNGSIVSMNMK 451
>sp|A6H8H5|KCNB2_MOUSE Potassium voltage-gated channel subfamily B member 2 OS=Mus
musculus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 102 bits (253), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS FY
Sbjct: 365 FTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFY 424
Query: 69 SHAQARSKLPKKRRRVLPVEQPRPKRGESVNVIN 102
Q R + KRR L R KR S+ +N
Sbjct: 425 KE-QKRQEKAIKRREAL----ERAKRNGSIVSMN 453
>sp|Q4ZHA6|KCNB2_BOVIN Potassium voltage-gated channel subfamily B member 2 OS=Bos taurus
GN=KCNB2 PE=2 SV=1
Length = 911
Score = 102 bits (253), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS FY
Sbjct: 365 FTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFY 424
Query: 69 SHAQARSKLPKKRRRVLPVEQPRPKRGESVNVIN 102
Q R + KRR L R KR S+ +N
Sbjct: 425 KE-QKRQEKAIKRREAL----ERAKRNGSIVSMN 453
>sp|Q03717|KCNB1_MOUSE Potassium voltage-gated channel subfamily B member 1 OS=Mus
musculus GN=Kcnb1 PE=1 SV=2
Length = 857
Score = 102 bits (253), Expect = 9e-22, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
+ F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS
Sbjct: 358 DTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFS 417
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQPRPKRGESVNVINRR 104
FY Q R + KRR L R KR S+ +N +
Sbjct: 418 EFYKE-QKRQEKAIKRREAL----ERAKRNGSIVSMNMK 451
>sp|P16390|KCNA3_MOUSE Potassium voltage-gated channel subfamily A member 3 OS=Mus
musculus GN=Kcna3 PE=2 SV=3
Length = 528
Score = 102 bits (253), Expect = 9e-22, Method: Composition-based stats.
Identities = 47/65 (72%), Positives = 53/65 (81%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
+P + FNSIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSN
Sbjct: 376 DPSSGFNSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSN 435
Query: 64 FSRFY 68
F+ FY
Sbjct: 436 FNYFY 440
>sp|P15387|KCNB1_RAT Potassium voltage-gated channel subfamily B member 1 OS=Rattus
norvegicus GN=Kcnb1 PE=1 SV=3
Length = 857
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
+ F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS
Sbjct: 358 DTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFS 417
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQPRPKRGESVNVINRR 104
FY Q R + KRR L R KR S+ +N +
Sbjct: 418 EFYKE-QKRQEKAIKRREAL----ERAKRNGSIVSMNMK 451
>sp|Q63099|KCNB2_RAT Potassium voltage-gated channel subfamily B member 2 OS=Rattus
norvegicus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IALP+P+IV+NFS FY
Sbjct: 365 FTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFY 424
Query: 69 SHAQARSKLPKKRRRVLPVEQPRPKRGESVNVIN 102
Q R + KRR L R KR S+ +N
Sbjct: 425 KE-QKRQEKAIKRREAL----ERAKRNGSIVSMN 453
>sp|P15385|KCNA4_RAT Potassium voltage-gated channel subfamily A member 4 OS=Rattus
norvegicus GN=Kcna4 PE=1 SV=1
Length = 655
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 50/64 (78%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
P F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 506 PTTHFQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNF 565
Query: 65 SRFY 68
+ FY
Sbjct: 566 NYFY 569
>sp|Q28527|KCNA4_MUSPF Potassium voltage-gated channel subfamily A member 4 OS=Mustela
putorius furo GN=KCNA4 PE=2 SV=1
Length = 654
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 50/64 (78%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
P F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 505 PTTHFQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNF 564
Query: 65 SRFY 68
+ FY
Sbjct: 565 NYFY 568
>sp|Q61423|KCNA4_MOUSE Potassium voltage-gated channel subfamily A member 4 OS=Mus
musculus GN=Kcna4 PE=1 SV=2
Length = 654
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 50/64 (78%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
P F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 505 PTTHFQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNF 564
Query: 65 SRFY 68
+ FY
Sbjct: 565 NYFY 568
>sp|P22459|KCNA4_HUMAN Potassium voltage-gated channel subfamily A member 4 OS=Homo
sapiens GN=KCNA4 PE=1 SV=2
Length = 653
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 50/64 (78%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
P F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 504 PTTHFQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNF 563
Query: 65 SRFY 68
+ FY
Sbjct: 564 NYFY 567
>sp|Q05037|KCNA4_BOVIN Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus
GN=KCNA4 PE=2 SV=1
Length = 660
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 50/64 (78%)
Query: 5 PENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNF 64
P F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 512 PTTHFQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNF 571
Query: 65 SRFY 68
+ FY
Sbjct: 572 NYFY 575
>sp|P16389|KCNA2_HUMAN Potassium voltage-gated channel subfamily A member 2 OS=Homo
sapiens GN=KCNA2 PE=1 SV=2
Length = 499
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 52/63 (82%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
E+ F SIP WWA+V+MTTVGYGDMVP T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 355 ESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 414
Query: 66 RFY 68
FY
Sbjct: 415 YFY 417
>sp|Q28293|KCNA2_CANFA Potassium voltage-gated channel subfamily A member 2 OS=Canis
familiaris GN=KCNA2 PE=2 SV=1
Length = 499
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 52/63 (82%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
E+ F SIP WWA+V+MTTVGYGDMVP T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 355 ESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 414
Query: 66 RFY 68
FY
Sbjct: 415 YFY 417
>sp|P10499|KCNA1_RAT Potassium voltage-gated channel subfamily A member 1 OS=Rattus
norvegicus GN=Kcna1 PE=1 SV=1
Length = 495
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
E+ F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 353 ESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 412
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQP 90
FY R +++ ++L V P
Sbjct: 413 YFYH----RETEGEEQAQLLHVSSP 433
>sp|P16388|KCNA1_MOUSE Potassium voltage-gated channel subfamily A member 1 OS=Mus
musculus GN=Kcna1 PE=2 SV=1
Length = 495
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
E+ F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 353 ESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 412
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQP 90
FY R +++ ++L V P
Sbjct: 413 YFYH----RETEGEEQAQLLHVSSP 433
>sp|Q09470|KCNA1_HUMAN Potassium voltage-gated channel subfamily A member 1 OS=Homo
sapiens GN=KCNA1 PE=1 SV=2
Length = 495
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
E+ F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 353 ESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 412
Query: 66 RFYSHAQARSKLPKKRRRVLPVEQP 90
FY R +++ ++L V P
Sbjct: 413 YFYH----RETEGEEQAQLLHVSSP 433
>sp|P22739|KCNA2_XENLA Potassium voltage-gated channel subfamily A member 2 OS=Xenopus
laevis GN=kcna2 PE=3 SV=2
Length = 499
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 52/63 (82%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
++ F SIP WWA+V+MTTVGYGDMVP T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 355 DSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 414
Query: 66 RFY 68
FY
Sbjct: 415 YFY 417
>sp|P63142|KCNA2_RAT Potassium voltage-gated channel subfamily A member 2 OS=Rattus
norvegicus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 52/63 (82%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
++ F SIP WWA+V+MTTVGYGDMVP T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 355 DSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 414
Query: 66 RFY 68
FY
Sbjct: 415 YFY 417
>sp|P63141|KCNA2_MOUSE Potassium voltage-gated channel subfamily A member 2 OS=Mus
musculus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 52/63 (82%)
Query: 6 ENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 65
++ F SIP WWA+V+MTTVGYGDMVP T G VG+LCA+AGVLTIALPVPVIVSNF+
Sbjct: 355 DSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFN 414
Query: 66 RFY 68
FY
Sbjct: 415 YFY 417
>sp|P79197|KCNA5_MUSPF Potassium voltage-gated channel subfamily A member 5 OS=Mustela
putorius furo GN=KCNA5 PE=2 SV=1
Length = 601
Score = 100 bits (248), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/65 (72%), Positives = 52/65 (80%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
N E F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSN
Sbjct: 447 NQETHFSSIPDAFWWAVVTMTTVGYGDMRPVTVGGKIVGSLCAIAGVLTIALPVPVIVSN 506
Query: 64 FSRFY 68
F+ FY
Sbjct: 507 FNYFY 511
>sp|P17971|KCNAL_DROME Potassium voltage-gated channel protein Shal OS=Drosophila
melanogaster GN=Shal PE=1 SV=2
Length = 571
Score = 100 bits (248), Expect = 4e-21, Method: Composition-based stats.
Identities = 44/75 (58%), Positives = 54/75 (72%)
Query: 8 DFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRF 67
+F SIP W+ +VTMTT+GYGDMVP+T G VG +C+L+GVL IALPVPVIVSNFSR
Sbjct: 353 NFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRI 412
Query: 68 YSHAQARSKLPKKRR 82
Y Q K +R+
Sbjct: 413 YHQNQRADKRKAQRK 427
>sp|P22001|KCNA3_HUMAN Potassium voltage-gated channel subfamily A member 3 OS=Homo
sapiens GN=KCNA3 PE=2 SV=3
Length = 575
Score = 98.6 bits (244), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 53/65 (81%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
+P + F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSN
Sbjct: 423 DPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSN 482
Query: 64 FSRFY 68
F+ FY
Sbjct: 483 FNYFY 487
>sp|P19024|KCNA5_RAT Potassium voltage-gated channel subfamily A member 5 OS=Rattus
norvegicus GN=Kcna5 PE=1 SV=1
Length = 602
Score = 98.6 bits (244), Expect = 9e-21, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
N + F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSN
Sbjct: 448 NHGSHFSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSN 507
Query: 64 FSRFYSHAQARSKLPKKRRRVLPVEQPRPKRGESVNVINRRMTAIKNNPSMFTGAKIGSN 123
F+ FY + + + L EQ +R ++ +R + TG + S+
Sbjct: 508 FNYFY-----HRETDHEEQAALKEEQGNQRRESGLDTGGQRKVSCSKASFCKTGGSLESS 562
>sp|Q61762|KCNA5_MOUSE Potassium voltage-gated channel subfamily A member 5 OS=Mus
musculus GN=Kcna5 PE=2 SV=2
Length = 602
Score = 98.2 bits (243), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
N + F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSN
Sbjct: 448 NQGSHFSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSN 507
Query: 64 FSRFY 68
F+ FY
Sbjct: 508 FNYFY 512
>sp|P22460|KCNA5_HUMAN Potassium voltage-gated channel subfamily A member 5 OS=Homo
sapiens GN=KCNA5 PE=1 SV=4
Length = 613
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/96 (55%), Positives = 63/96 (65%), Gaps = 5/96 (5%)
Query: 4 NPENDFNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSN 63
N F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSN
Sbjct: 459 NQGTHFSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSN 518
Query: 64 FSRFYSHAQARSKLPKKRRRVLPVEQPRPKRGESVN 99
F+ FY H + + P VL EQ +G ++
Sbjct: 519 FNYFY-HRETDHEEPA----VLKEEQGTQSQGPGLD 549
>sp|Q61923|KCNA6_MOUSE Potassium voltage-gated channel subfamily A member 6 OS=Mus
musculus GN=Kcna6 PE=1 SV=1
Length = 529
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/60 (75%), Positives = 49/60 (81%)
Query: 9 FNSIPLGLWWALVTMTTVGYGDMVPKTYVGMFVGALCALAGVLTIALPVPVIVSNFSRFY 68
F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF+ FY
Sbjct: 406 FPSIPDAFWWAVVTMTTVGYGDMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 465
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,707,714
Number of Sequences: 539616
Number of extensions: 1836447
Number of successful extensions: 4311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4049
Number of HSP's gapped (non-prelim): 284
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)