Query psy11898
Match_columns 124
No_of_seqs 135 out of 1032
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 21:46:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11898.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11898hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3imh_A Galactose-1-epimerase; 99.9 1.5E-26 5.1E-31 188.8 10.9 90 10-106 241-331 (338)
2 1nsx_A Galactose mutarotase; e 99.9 6.5E-25 2.2E-29 178.5 10.6 94 10-108 241-340 (347)
3 1lur_A Aldose 1-epimerase; vit 99.9 3E-24 1E-28 173.7 10.7 96 10-107 236-338 (339)
4 1snz_A Aldose 1-epimerase; mut 99.9 5E-24 1.7E-28 172.4 9.3 96 10-106 243-343 (344)
5 1z45_A GAL10 bifunctional prot 99.9 2.1E-21 7.1E-26 167.0 10.4 88 10-105 597-699 (699)
6 1yga_A Hypothetical 37.9 kDa p 99.8 9.4E-21 3.2E-25 152.5 8.2 89 10-106 238-342 (342)
7 3nre_A Aldose 1-epimerase; str 99.8 3.6E-20 1.2E-24 147.2 9.4 89 9-106 198-290 (291)
8 3os7_A Galactose mutarotase-li 99.5 3.3E-14 1.1E-18 114.7 9.4 83 9-105 243-339 (341)
9 3mwx_A Aldose 1-epimerase; str 99.5 1.5E-13 5E-18 110.0 10.6 83 9-105 228-322 (326)
10 2cir_A Hexose-6-phosphate muta 99.3 4E-13 1.4E-17 105.7 3.2 83 10-105 201-289 (297)
11 2hta_A Putative enzyme related 99.2 8.6E-12 2.9E-16 99.2 6.6 84 9-105 220-307 (309)
12 3q1n_A Galactose mutarotase re 99.2 3E-11 1E-15 95.7 9.5 76 10-98 202-287 (294)
13 3dcd_A Galactose mutarotase re 98.7 8.3E-08 2.8E-12 76.5 9.7 80 10-102 199-289 (307)
14 3k25_A SLR1438 protein; struct 98.5 3.3E-07 1.1E-11 72.1 8.4 80 10-105 205-287 (289)
15 1jov_A HI1317; hypothetical pr 86.0 3.3 0.00011 31.6 7.7 38 10-48 190-228 (270)
16 3ty1_A Hypothetical aldose 1-e 72.9 6.3 0.00022 31.9 5.6 81 20-115 272-358 (384)
17 3a07_A Actinohivin; carbohydra 48.1 15 0.0005 23.9 3.0 48 25-73 47-97 (118)
18 1so9_A Cytochrome C oxidase as 47.1 5.1 0.00018 29.4 0.6 45 31-75 53-108 (164)
19 1knl_A Endo-1,4-beta-xylanase 41.1 20 0.00067 23.3 2.7 46 29-74 55-105 (130)
20 2d1z_A Endo-1,4-beta-D-xylanas 38.4 18 0.00062 29.2 2.6 46 29-74 361-411 (436)
21 2ao3_A 29-kDa galactose-bindin 38.0 34 0.0012 22.3 3.6 51 24-74 5-65 (130)
22 2dry_A 29-kDa galactose-bindin 31.6 62 0.0021 21.6 4.1 49 24-72 5-63 (130)
23 3c9z_A Agglutinin II, SNA-II; 29.6 65 0.0022 23.6 4.3 45 30-74 52-103 (258)
24 1xhb_A Polypeptide N-acetylgal 27.7 35 0.0012 27.1 2.7 44 30-73 392-440 (472)
25 2ffu_A Ppgalnact-2, polypeptid 27.1 31 0.0011 27.8 2.2 44 30-73 423-473 (501)
26 2xb2_G Regulator of nonsense t 24.4 25 0.00087 21.6 0.9 9 39-47 12-20 (60)
27 2aai_B Ricin (B chain); glycos 20.9 89 0.003 23.0 3.6 45 29-73 186-236 (262)
No 1
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=99.94 E-value=1.5e-26 Score=188.75 Aligned_cols=90 Identities=17% Similarity=0.111 Sum_probs=81.6
Q ss_pred CceeeeecCC-ceeEEEEcCCCCcEEEEEcCCCeEEEEcCCCCCccCCCCCcccCCceeEEEccCCCCCCCCCCCCCCce
Q psy11898 10 GTDRSFLSLE-FSFHRALDPESGRYMEVHTDQPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQNFPNAVNIHRSSWGK 88 (124)
Q Consensus 10 GyDh~Fvl~~-~~~a~L~s~~SG~~L~v~TdqP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q~~PDAiN~p~~~~~~ 88 (124)
||||||+++. +++|+|.+ |||+|+|+||+|+|||||+|++++. + .|..|.+++|||||||.+| +|+|+|++.+
T Consensus 241 g~Dh~f~l~~~~~~a~l~~--sg~~l~v~t~~p~~q~YTgn~l~~~-g-~g~~~~~~~g~clE~q~~P--~n~~~f~~~v 314 (338)
T 3imh_A 241 GLDHPFILNGNNPAALLSS--NKHRLIVKTNAPALVLYAGNHFNHT-G-IVNNIGQYDGITFEAQCPP--AEGNDLGQIT 314 (338)
T ss_dssp SCEEEEEECSCSCSEEEEC--SSEEEEEEESSSEEEEECCTTCCSB-T-TBTTCCTTSCEECEEESCC--CSSSCCGGGE
T ss_pred CCCCceeecCCceEEEEEC--CCeEEEEEeCCCEEEEeCCCCcCCC-C-CCcccCccCEEEEEccCCC--CCCCCCCCeE
Confidence 9999999964 56888976 9999999999999999999999764 5 6888999999999999999 9999999887
Q ss_pred eecCCceEEEEEEEEEEe
Q psy11898 89 IQTCGVLFIWSSADFVNC 106 (124)
Q Consensus 89 l~~~~~~y~~~t~y~f~~ 106 (124)
|+|++ .|.++|+|+|..
T Consensus 315 L~pGe-~y~~~t~y~f~~ 331 (338)
T 3imh_A 315 LLPFE-KFKRTVDWKFEE 331 (338)
T ss_dssp ECTTC-CEEEEEEEEEEE
T ss_pred ECCCC-EEEEEEEEEECC
Confidence 77777 999999999975
No 2
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=99.92 E-value=6.5e-25 Score=178.48 Aligned_cols=94 Identities=22% Similarity=0.209 Sum_probs=84.5
Q ss_pred CceeeeecCC----ceeEEEEcCCCCcEEEEEcCCCeEEEEcCCCCCccCC--CCCcccCCceeEEEccCCCCCCCCCCC
Q psy11898 10 GTDRSFLSLE----FSFHRALDPESGRYMEVHTDQPGIQFYTGNYIPEMSG--KKGATYTKHCAYCFETQNFPNAVNIHR 83 (124)
Q Consensus 10 GyDh~Fvl~~----~~~a~L~s~~SG~~L~v~TdqP~vqvYTgn~l~~~~g--~~g~~~~~~~GiclE~Q~~PDAiN~p~ 83 (124)
||||||+++. +.+|+|.+ |||+|+|+|++|+|||||+|++++ + +.|..|.+++|||||||.+|||+|+++
T Consensus 241 g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~~p~lqvyt~~~~~~--g~~~~g~~~~~~~~vclEpq~~pDa~n~~~ 316 (347)
T 1nsx_A 241 GIDHPFLLDQLGLDKEQARLTL--DDTSISVFTDQPSIVIFTANFGDL--GTLYHEKKQVHHGGITFECQVSPGSEQIPE 316 (347)
T ss_dssp SCEEEEEESSCBTTSCCEEEEE--TTEEEEEEESSSEEEEECCCCTTC--CCEETTEECCTTCCEECEEESCTTTTTCGG
T ss_pred CCCEEEEecCCCCceEEEEEEe--CCCEEEEEeCCCEEEEECCCCCcc--ccccCCcccCCcCEEEEeccCCCCccCCCC
Confidence 8999999853 46889988 999999999999999999999875 4 567889999999999999999999999
Q ss_pred CCCceeecCCceEEEEEEEEEEeee
Q psy11898 84 SSWGKIQTCGVLFIWSSADFVNCKP 108 (124)
Q Consensus 84 ~~~~~l~~~~~~y~~~t~y~f~~~~ 108 (124)
|++.+|.|++ .|+++++|+|++.+
T Consensus 317 ~~~~~L~pGe-~~~~~~~~~f~~~~ 340 (347)
T 1nsx_A 317 LGDISLKAGE-KYQATTIYSLHTKL 340 (347)
T ss_dssp GCCCEECTTC-EEEEEEEEEEEECC
T ss_pred CCCeEECCCC-EEEEEEEEEEEecc
Confidence 9887777777 99999999998764
No 3
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=99.91 E-value=3e-24 Score=173.73 Aligned_cols=96 Identities=19% Similarity=0.256 Sum_probs=85.8
Q ss_pred CceeeeecCC------c-eeEEEEcCCCCcEEEEEcCCCeEEEEcCCCCCccCCCCCcccCCceeEEEccCCCCCCCCCC
Q psy11898 10 GTDRSFLSLE------F-SFHRALDPESGRYMEVHTDQPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQNFPNAVNIH 82 (124)
Q Consensus 10 GyDh~Fvl~~------~-~~a~L~s~~SG~~L~v~TdqP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q~~PDAiN~p 82 (124)
||||+|+++. + .+|+|.++.|||+|+|+|++|++||||+|++ +..+++|..|.+++|||||||.+|||+|++
T Consensus 236 ~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~p~~~vyt~~~~-~~~g~~g~~y~~~~~vclEp~~~pDa~n~~ 314 (339)
T 1lur_A 236 DLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTSYPVIHLYASKFL-DCKGKKGEHYKANKALAIEPQFHSAAPNFD 314 (339)
T ss_dssp CCEEEEEECCCCC----CCCEEEECTTTCEEEEEEESSSEEEEECCTTC-CEECGGGCEECTTCCEEEEEESCTTGGGCT
T ss_pred CCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeCCCEEEEECCCCc-cccCCCCcccCCCCEEEEeccCCCCccCCC
Confidence 9999999852 2 5799999999999999999999999999998 555667888999999999999999999999
Q ss_pred CCCCceeecCCceEEEEEEEEEEee
Q psy11898 83 RSSWGKIQTCGVLFIWSSADFVNCK 107 (124)
Q Consensus 83 ~~~~~~l~~~~~~y~~~t~y~f~~~ 107 (124)
+|++.+|.+++ .|++.++|+|+..
T Consensus 315 ~~~~~~L~pGe-~~~~~~~~~f~~~ 338 (339)
T 1lur_A 315 HFPDVSLRPGD-HYCQEIVYTFSHV 338 (339)
T ss_dssp TSCCCEECTTC-CEEEEEEEEEEEC
T ss_pred CCCCeEECCCC-EEEEEEEEEEEEe
Confidence 99887777777 9999999999853
No 4
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=99.90 E-value=5e-24 Score=172.40 Aligned_cols=96 Identities=38% Similarity=0.561 Sum_probs=85.3
Q ss_pred CceeeeecCC----ceeEEEEcCCCCcEEEEEcCCCeEEEEcCCCCCcc-CCCCCcccCCceeEEEccCCCCCCCCCCCC
Q psy11898 10 GTDRSFLSLE----FSFHRALDPESGRYMEVHTDQPGIQFYTGNYIPEM-SGKKGATYTKHCAYCFETQNFPNAVNIHRS 84 (124)
Q Consensus 10 GyDh~Fvl~~----~~~a~L~s~~SG~~L~v~TdqP~vqvYTgn~l~~~-~g~~g~~~~~~~GiclE~Q~~PDAiN~p~~ 84 (124)
||||+|+++. ..+|+|.++.|||+|+|+|++|++||||+|+++.. .++.|..|.++.|||||||.+|||+|+++|
T Consensus 243 g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~~p~~~vyt~~~~~~~~~~~~~~~y~~~~~vclEp~~~pda~n~~~~ 322 (344)
T 1snz_A 243 GFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRF 322 (344)
T ss_dssp CCEEEEEECCCSSCEEEEEEEETTTTEEEEEEESSSEEEEECCTTCEEEEECGGGCEEETTSCBEEEEESCTTGGGCTTS
T ss_pred CCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeCCCeEEEECCCCCCccccCCCCcccCCCCEEEEeCcCCCCcccCCCC
Confidence 8999999853 56899999999999999999999999999998653 355677888899999999999999999999
Q ss_pred CCceeecCCceEEEEEEEEEEe
Q psy11898 85 SWGKIQTCGVLFIWSSADFVNC 106 (124)
Q Consensus 85 ~~~~l~~~~~~y~~~t~y~f~~ 106 (124)
++.+|.|++ .|++.++|+|+.
T Consensus 323 ~~~~L~pGe-~~~~~~~~~f~~ 343 (344)
T 1snz_A 323 PPVLLRPGE-EYDHTTWFKFSV 343 (344)
T ss_dssp CCCEECTTS-CEEEEEEEEEEE
T ss_pred CCeEECCCC-EEEEEEEEEEEe
Confidence 887777776 999999999985
No 5
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.85 E-value=2.1e-21 Score=166.99 Aligned_cols=88 Identities=22% Similarity=0.329 Sum_probs=77.1
Q ss_pred CceeeeecCC--------------ceeEEEEcCCCCcEEEEEcCCCeEEEEcCCCCCccCCCCCcccCCceeEEEccCCC
Q psy11898 10 GTDRSFLSLE--------------FSFHRALDPESGRYMEVHTDQPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQNF 75 (124)
Q Consensus 10 GyDh~Fvl~~--------------~~~a~L~s~~SG~~L~v~TdqP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q~~ 75 (124)
||||+|+++. ..+|+|.++.||+.|+|+|++|++||||+|++++ | |.++.|||||||++
T Consensus 597 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~~p~~~~yt~~~~~~-----~--~~~~~~~clEp~~~ 669 (699)
T 1z45_A 597 QFDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLSTEPTYQFYTGDFLSA-----G--YEARQGFAIEPGRY 669 (699)
T ss_dssp CCEEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEESSSEEEEECCTTCCT-----T--CCTTSCEEEEEESC
T ss_pred CCCcceEccCccccccccccccccceeEEEEcCCCCCEEEEEECCCEEEEEeCCCCCC-----C--CCCCCEEEEecCCC
Confidence 8999999853 3579999999999999999999999999998742 3 78899999999999
Q ss_pred CCCCCCCCCCC-ceeecCCceEEEEEEEEEE
Q psy11898 76 PNAVNIHRSSW-GKIQTCGVLFIWSSADFVN 105 (124)
Q Consensus 76 PDAiN~p~~~~-~~l~~~~~~y~~~t~y~f~ 105 (124)
|||+|+++|+. .+|.|++ .|++.++|+|+
T Consensus 670 pda~n~~~~~~~~~L~pge-~~~~~~~~~f~ 699 (699)
T 1z45_A 670 IDAINQENWKDCVTLKNGE-TYGSKIVYRFS 699 (699)
T ss_dssp SSGGGCTTTGGGGEEETTC-EEEEEEEEEEC
T ss_pred CCccCcccCCCCcEECCCC-EEEEEEEEEEC
Confidence 99999999954 4566666 99999999995
No 6
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=99.83 E-value=9.4e-21 Score=152.51 Aligned_cols=89 Identities=17% Similarity=0.275 Sum_probs=77.5
Q ss_pred CceeeeecCC---------------ceeEEEEcCCCCcEEEEEcCCCeEEEEcCCCCCccCCCCCcccCCceeEEEccCC
Q psy11898 10 GTDRSFLSLE---------------FSFHRALDPESGRYMEVHTDQPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQN 74 (124)
Q Consensus 10 GyDh~Fvl~~---------------~~~a~L~s~~SG~~L~v~TdqP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q~ 74 (124)
+|||+|++.. +.+|+|.++.+||+|+|+|++|++||||+++++ ..|.++.+||||||.
T Consensus 238 ~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~~p~~~vyt~~~~~-------~~y~~~~~vclEp~~ 310 (342)
T 1yga_A 238 VFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTEPTVHLYTGDNLC-------GKFVPRSGFAVQQGR 310 (342)
T ss_dssp CCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEESSSEEEEECCTTCC-------TTSCTTSCBEEEEES
T ss_pred CCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeCCCEEEEECCCCcc-------ccCCCCCEEEEECCC
Confidence 7999999853 268999999999999999999999999999862 356778999999999
Q ss_pred CCCCCCCCCCCC-ceeecCCceEEEEEEEEEEe
Q psy11898 75 FPNAVNIHRSSW-GKIQTCGVLFIWSSADFVNC 106 (124)
Q Consensus 75 ~PDAiN~p~~~~-~~l~~~~~~y~~~t~y~f~~ 106 (124)
+|||+|+++|++ .+|.+++ .|++.++|+|++
T Consensus 311 ~pda~n~~~~~~~~~L~pGe-~~~~~~~~~f~~ 342 (342)
T 1yga_A 311 YVDAINRDEWRGCVLLKRGE-VYTSKTQYKFDI 342 (342)
T ss_dssp CSSGGGCHHHHGGGEEETTC-CEEEEEEEEEEC
T ss_pred CCCcccCCCCCCCeEECCCC-EEEEEEEEEEEC
Confidence 999999999877 4566665 999999999974
No 7
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=99.82 E-value=3.6e-20 Score=147.23 Aligned_cols=89 Identities=12% Similarity=0.120 Sum_probs=74.8
Q ss_pred CCceeeeecCCceeEEEEcCCCCcEEEEEcCCCe--EEEEcCCCCCccCCCCCcccCCceeEEEccC-CCCCCCCCCCCC
Q psy11898 9 MGTDRSFLSLEFSFHRALDPESGRYMEVHTDQPG--IQFYTGNYIPEMSGKKGATYTKHCAYCFETQ-NFPNAVNIHRSS 85 (124)
Q Consensus 9 ~GyDh~Fvl~~~~~a~L~s~~SG~~L~v~TdqP~--vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q-~~PDAiN~p~~~ 85 (124)
.||||+|++.. .+|+|.++.+||+|+|+||+|+ +||||+|+- .|..|. |.||||||| .+|||+|||+|+
T Consensus 198 ~~~D~~f~~~~-~~a~l~~~~~g~~l~v~t~~p~~~~~vyt~~~~------~~~~~~-~~~vclEp~~~~pda~n~~~~~ 269 (291)
T 3nre_A 198 QWVNNGFAGWN-GQARIEQPQEGYAIIMETTPPAPCYFIFVSDPA------FDKGYA-FDFFCLEPMSHAPDDHHRPEGG 269 (291)
T ss_dssp SCEEEEEESCC-SEEEEEEGGGTEEEEEEEESCCSEEEEEECCTT------TCTTCC-SCEEEEEEESSCTTGGGSGGGT
T ss_pred ccccceeecCC-ccEEEEECCCCeEEEEEeCCCCceEEEEcCCCC------CCCCcc-CCEEEEcCccCCCCCCcCCCCC
Confidence 48999999754 5789999999999999999998 999999851 234565 899999999 599999999997
Q ss_pred C-ceeecCCceEEEEEEEEEEe
Q psy11898 86 W-GKIQTCGVLFIWSSADFVNC 106 (124)
Q Consensus 86 ~-~~l~~~~~~y~~~t~y~f~~ 106 (124)
. .+|.|++ .|++.++|+|+.
T Consensus 270 ~~~~L~PGe-~~~~~~~~~~~~ 290 (291)
T 3nre_A 270 DLIALAPGE-STTSEMSLRVEW 290 (291)
T ss_dssp TCEEECTTC-EEEEEEEEEEEE
T ss_pred CCEEECCCC-EEEEEEEEEEEe
Confidence 4 4555555 999999999963
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=99.52 E-value=3.3e-14 Score=114.74 Aligned_cols=83 Identities=8% Similarity=0.027 Sum_probs=67.2
Q ss_pred CCceeeeecC-----Cc--eeEEEEcCCCCcEEEEEc--CCCeEEEEcCCCCCccCCCCCcccCCceeEEEccC-CCCCC
Q psy11898 9 MGTDRSFLSL-----EF--SFHRALDPESGRYMEVHT--DQPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQ-NFPNA 78 (124)
Q Consensus 9 ~GyDh~Fvl~-----~~--~~a~L~s~~SG~~L~v~T--dqP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q-~~PDA 78 (124)
.+|||+|+++ .. ..|+|.++.+|++|+|.| ++|++||||++. .+.+|||||| .+|||
T Consensus 243 ~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~pDa 309 (341)
T 3os7_A 243 HPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG-------------DKKYACIEPQTSIINS 309 (341)
T ss_dssp SCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGG-------------CSSEEEEEEESSCTTG
T ss_pred cchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCC-------------CCCEEEECCccCCCCc
Confidence 4899999975 22 579999999999999999 799999999861 3468999998 79999
Q ss_pred CCCCCC----CCceeecCCceEEEEEEEEEE
Q psy11898 79 VNIHRS----SWGKIQTCGVLFIWSSADFVN 105 (124)
Q Consensus 79 iN~p~~----~~~~l~~~~~~y~~~t~y~f~ 105 (124)
+|++++ ...+|.|++ .|+...++.|.
T Consensus 310 ~n~~~~~~~~g~~~L~PGe-~~~~~~~i~v~ 339 (341)
T 3os7_A 310 PNVKLDRSVSGFKTLKPNE-SWSGVCKLYIE 339 (341)
T ss_dssp GGCSSCHHHHCCEEECTTC-EEEEEEEEEEE
T ss_pred cCCCCcccccCceEECCCC-EEEEEEEEEEE
Confidence 999986 334555555 99988877764
No 9
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=99.49 E-value=1.5e-13 Score=109.98 Aligned_cols=83 Identities=16% Similarity=0.057 Sum_probs=67.9
Q ss_pred CCceeeeecC-----CceeEEEEcCCCCcEEEEE--cCCCeEEEEcCCCCCccCCCCCcccCCceeEEEccCC-CCCCCC
Q psy11898 9 MGTDRSFLSL-----EFSFHRALDPESGRYMEVH--TDQPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQN-FPNAVN 80 (124)
Q Consensus 9 ~GyDh~Fvl~-----~~~~a~L~s~~SG~~L~v~--TdqP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q~-~PDAiN 80 (124)
.++||+|++. ....|+|.++++|++|++. +++|.+||||++. ...+||||||. +|||+|
T Consensus 228 ~~~D~~f~~~~~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~~da~n 294 (326)
T 3mwx_A 228 KQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPYTWVTNAVN 294 (326)
T ss_dssp CCCEEEEEESHHHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-------------CSSEEEEEEESSCTTGGG
T ss_pred ccccceeeeccccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-------------CCCEEEECCccCCCCccc
Confidence 4899999985 2468999999999999999 6999999999862 23589999999 999999
Q ss_pred CCC----CCCceeecCCceEEEEEEEEEE
Q psy11898 81 IHR----SSWGKIQTCGVLFIWSSADFVN 105 (124)
Q Consensus 81 ~p~----~~~~~l~~~~~~y~~~t~y~f~ 105 (124)
++. +...+|.|++ .|+..++|+|.
T Consensus 295 ~~~~~~~~g~~~L~PGe-~~~~~~~i~~~ 322 (326)
T 3mwx_A 295 LDLPSSLTGLQVLEPGE-ETTAKSSITIE 322 (326)
T ss_dssp CCSCHHHHCCEEECTTC-EEEEEEEEEEE
T ss_pred cCCCccccCCeEECCCC-eEEEEEEEEEE
Confidence 985 3334555555 99999988885
No 10
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=99.33 E-value=4e-13 Score=105.74 Aligned_cols=83 Identities=10% Similarity=0.090 Sum_probs=62.9
Q ss_pred CceeeeecCC-ceeEEEEcCCCCcEEEEEcCC-CeEEEEcCCCCCccC---CC-CCcccCCceeEEEccCCCCCCCCCCC
Q psy11898 10 GTDRSFLSLE-FSFHRALDPESGRYMEVHTDQ-PGIQFYTGNYIPEMS---GK-KGATYTKHCAYCFETQNFPNAVNIHR 83 (124)
Q Consensus 10 GyDh~Fvl~~-~~~a~L~s~~SG~~L~v~Tdq-P~vqvYTgn~l~~~~---g~-~g~~~~~~~GiclE~Q~~PDAiN~p~ 83 (124)
|+||+|.... +..|+|.++ +|++|+|.|+. |++||||+ +++... +. .+..| ..+||||||.+
T Consensus 201 ~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p~~~v~t~-~~~~~~~~~~~~~~~~~--~~~vClEp~~~-------- 268 (297)
T 2cir_A 201 ETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNLPDTVVWNP-WIEKSQGMADFEPKTGY--QQMICIEPGHV-------- 268 (297)
T ss_dssp CEEEEECCCCTTCCEEEEET-TEEEEEEEEESCCEEEEEEC-HHHHHHHCTTCCSTTGG--GGEEEEEEEEE--------
T ss_pred ccceEEeCCCCCccEEEEcC-CCCEEEEEecCCCcEEEECc-chhhccccccCCCcccc--ccEEEECceEC--------
Confidence 8999997543 467899999 99999999996 99999997 553211 11 23333 46999999974
Q ss_pred CCCceeecCCceEEEEEEEEEE
Q psy11898 84 SSWGKIQTCGVLFIWSSADFVN 105 (124)
Q Consensus 84 ~~~~~l~~~~~~y~~~t~y~f~ 105 (124)
++..+|.|++ .|++.++|+|.
T Consensus 269 ~~~~~L~pGe-~~~~~~~~~~~ 289 (297)
T 2cir_A 269 HDFISLAPGK-KWNAYQLLCKE 289 (297)
T ss_dssp EEEEEECTTC-EEEEEEEEECC
T ss_pred CCCEEECCCC-eEEEEEEEEEE
Confidence 5555666666 99999999995
No 11
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=99.25 E-value=8.6e-12 Score=99.15 Aligned_cols=84 Identities=15% Similarity=0.060 Sum_probs=63.0
Q ss_pred CCceeeeecCCceeEEEEcCCCCcEEEEEcC-CCeEEEEcCCCCCc---cCCCCCcccCCceeEEEccCCCCCCCCCCCC
Q psy11898 9 MGTDRSFLSLEFSFHRALDPESGRYMEVHTD-QPGIQFYTGNYIPE---MSGKKGATYTKHCAYCFETQNFPNAVNIHRS 84 (124)
Q Consensus 9 ~GyDh~Fvl~~~~~a~L~s~~SG~~L~v~Td-qP~vqvYTgn~l~~---~~g~~g~~~~~~~GiclE~Q~~PDAiN~p~~ 84 (124)
.|+||+|+ +....|+|.++.+||+|+|.|+ +|++||||++ ++. ..+..+..| ..+||||||.. +
T Consensus 220 ~~~D~~~~-~~~~~~~l~~~~~g~~l~v~~~~~p~~~vwtp~-~~~~~~~~d~~~~~~--~~~vClEp~~~--------~ 287 (309)
T 2hta_A 220 DRTDRVYL-NPEACSVIHDATLNRTIDVVHHHHLNVVGWNPG-PALSVSMGDMPDDGY--KTFVCVETVYA--------T 287 (309)
T ss_dssp SCEEEEES-SCCSEEEEEETTTTEEEEEEEESCSEEEEEECH-HHHHHHCTTSCTTGG--GGEEEEEEEEE--------E
T ss_pred CccCcEEe-CCCCCEEEEeCCCCcEEEEEECCCCcEEEECCC-cccccccccCCcccc--ccEEEECeeec--------C
Confidence 38999996 4456789999999999999998 9999999983 211 011222223 46999999987 5
Q ss_pred CCceeecCCceEEEEEEEEEE
Q psy11898 85 SWGKIQTCGVLFIWSSADFVN 105 (124)
Q Consensus 85 ~~~~l~~~~~~y~~~t~y~f~ 105 (124)
+..+|.|++ .|+..++|+|.
T Consensus 288 ~~~~L~PGe-~~~~~~~~~~~ 307 (309)
T 2hta_A 288 APQQATEEK-PSRLAQTICVA 307 (309)
T ss_dssp EEEEEBTTB-CEEEEEEEEEE
T ss_pred CCEEECCCC-eEEEEEEEEEe
Confidence 555566655 99999999985
No 12
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=99.24 E-value=3e-11 Score=95.66 Aligned_cols=76 Identities=8% Similarity=0.007 Sum_probs=60.3
Q ss_pred Ccee-eeecCC--ceeEEEEcCCCCcEEEEEcC-CCeEEEEcCCCCCccCCCCCcccCCceeEEEccC-CCCCCCCCCCC
Q psy11898 10 GTDR-SFLSLE--FSFHRALDPESGRYMEVHTD-QPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQ-NFPNAVNIHRS 84 (124)
Q Consensus 10 GyDh-~Fvl~~--~~~a~L~s~~SG~~L~v~Td-qP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q-~~PDAiN~p~~ 84 (124)
+||| +|+++. ...|+|.++++|+.|+|.++ .|.++|||++.. +..+|||||| .+|||+|++.+
T Consensus 202 ~fd~d~~~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~l~iwt~~~~------------~~~~vciEP~tg~~Da~n~~~~ 269 (294)
T 3q1n_A 202 LLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTIWSPEHK------------KAPFIAVEPFDGLPDQAGEPTD 269 (294)
T ss_dssp HHTTCCEEECCTTCCEEEEECTTCSCCEEEECTTCSEEEEECCTTS------------CCSEEEEEEEESCCCBSSSCCB
T ss_pred HhcCCeEEEcCCCccEEEEEeCCCCcEEEEEECCCCEEEEECcCCC------------CCCEEEEeCcCCCCCCCCCCCc
Confidence 6886 898863 45789999999999999996 799999998521 3468999999 89999999875
Q ss_pred C-----CceeecCCceEEE
Q psy11898 85 S-----WGKIQTCGVLFIW 98 (124)
Q Consensus 85 ~-----~~~l~~~~~~y~~ 98 (124)
. ..+|.+++ .|+.
T Consensus 270 ~~~k~g~~~L~pGe-~~~~ 287 (294)
T 3q1n_A 270 WYTKLGNTTLSAGA-NKQL 287 (294)
T ss_dssp TTTCTTCEEECTTC-EEEE
T ss_pred hhccCCCEEECCCC-EEEE
Confidence 3 33555555 7773
No 13
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=98.70 E-value=8.3e-08 Score=76.48 Aligned_cols=80 Identities=8% Similarity=-0.017 Sum_probs=57.8
Q ss_pred Ccee-eeecCC--c-eeEEEEcCCCCcEEEEEcC-CCeEEEEcCCCCCccCCCCCcccCCceeEEEccC-CCCCCCCCCC
Q psy11898 10 GTDR-SFLSLE--F-SFHRALDPESGRYMEVHTD-QPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQ-NFPNAVNIHR 83 (124)
Q Consensus 10 GyDh-~Fvl~~--~-~~a~L~s~~SG~~L~v~Td-qP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q-~~PDAiN~p~ 83 (124)
.+|+ +|+++. . ..|+|.++++|+.|+|.++ .|.++|||.+. .....|||||| .+|||+|++.
T Consensus 199 ~fd~da~~~~~~~~~~~v~l~~~~~g~~v~v~~~~fp~l~iwt~~~------------~~~~fvciEP~tg~~Da~n~~~ 266 (307)
T 3dcd_A 199 LFKDDALIYELRGNDNKVSLRTDKNKFHVNVWTRDAPFVGIWSQYP------------KTDNYVCIEPWWGIADRDDADG 266 (307)
T ss_dssp GGTTSCEEEECCSSCEEEEEEETTSSCEEEEEEETCSEEEEECCSS------------SCCSEEEEEEEESCCCBTTCCS
T ss_pred HcCCceEEEcCCCCceEEEEEeCCCCcEEEEEECCCCEEEEECcCC------------CCCCEEEEccccCCCCCCCCCC
Confidence 5664 677653 3 6789999999999999986 59999999731 02347999999 7999999986
Q ss_pred C-----CCceeecCCceEEEEEEE
Q psy11898 84 S-----SWGKIQTCGVLFIWSSAD 102 (124)
Q Consensus 84 ~-----~~~~l~~~~~~y~~~t~y 102 (124)
. ....|.|++ .++...++
T Consensus 267 ~~~~k~gl~~L~PGe-~~~~~~~i 289 (307)
T 3dcd_A 267 DLEHKYGMNHLKPGK-EFQAGFSM 289 (307)
T ss_dssp BGGGCTTCEEECTTC-EEEEEEEE
T ss_pred chhccCCCEEECCCC-EEEEEEEE
Confidence 3 233555555 76644333
No 14
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=98.52 E-value=3.3e-07 Score=72.05 Aligned_cols=80 Identities=16% Similarity=0.117 Sum_probs=59.3
Q ss_pred CceeeeecCCceeEEEEcCCCCcEEEEEcCC--CeEEEEcCCCCCccCCCCCcccCCceeEEEccCC-CCCCCCCCCCCC
Q psy11898 10 GTDRSFLSLEFSFHRALDPESGRYMEVHTDQ--PGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQN-FPNAVNIHRSSW 86 (124)
Q Consensus 10 GyDh~Fvl~~~~~a~L~s~~SG~~L~v~Tdq--P~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q~-~PDAiN~p~~~~ 86 (124)
.+|++|.......+.|.++.+|++|+|.++. |.++||+.. ....||+|||. .|||.|+.. ..
T Consensus 205 ~~D~~~~~~~~~~~~l~~~~~~~~i~v~~~~~~~~~vvw~~~--------------~~~fvCvEP~~~~~da~n~~~-~~ 269 (289)
T 3k25_A 205 ELDLAFTQISQPRAHFIDPDRNLKIEVSFSELYQTLVLWTVA--------------GKDYLCLEPWSGPRNALNSGE-QL 269 (289)
T ss_dssp EEEEEECCCSSSEEEEEETTTTEEEEEEECTTCCEEEEEEES--------------SSCEEEEEEESSCTTHHHHCT-TC
T ss_pred hhceEeecCCCCeEEEEECCCCCEEEEEeCCCCcEEEEEecC--------------CCCEEEEccccCCCCcccCCC-Cc
Confidence 6899997543456899999999999999876 899999842 13689999987 689999864 33
Q ss_pred ceeecCCceEEEEEEEEEE
Q psy11898 87 GKIQTCGVLFIWSSADFVN 105 (124)
Q Consensus 87 ~~l~~~~~~y~~~t~y~f~ 105 (124)
..|.|++ .++...++.+.
T Consensus 270 ~~L~PGe-~~~~~~~i~v~ 287 (289)
T 3k25_A 270 AWVEPYS-SRSAWVNFQVS 287 (289)
T ss_dssp EEECTTE-EEEEEEEEEEE
T ss_pred EEECCCC-eEEEEEEEEEE
Confidence 3444544 77766555543
No 15
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=85.97 E-value=3.3 Score=31.60 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=29.2
Q ss_pred CceeeeecCCceeEEEEcCCCCcEEEEEc-CCCeEEEEcC
Q psy11898 10 GTDRSFLSLEFSFHRALDPESGRYMEVHT-DQPGIQFYTG 48 (124)
Q Consensus 10 GyDh~Fvl~~~~~a~L~s~~SG~~L~v~T-dqP~vqvYTg 48 (124)
..|..|.. ....+.+.++..++.++|.. +.|.++||+-
T Consensus 190 ~~D~vy~~-~~~~~~i~d~~~~~~i~v~~~~~~~~vvWnP 228 (270)
T 1jov_A 190 NVDCIYSA-ENMQNQILDKSFNRTIALHHHNASQFVLWNP 228 (270)
T ss_dssp CEEEEEEC-SSSEEEEEETTTTEEEEEEEESCSEEEEEEC
T ss_pred CccceeCC-CCCCEEEEECCCCcEEEEEEcCCCeEEEECC
Confidence 57888763 23457888999999998876 4699999984
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=72.89 E-value=6.3 Score=31.86 Aligned_cols=81 Identities=9% Similarity=0.051 Sum_probs=45.9
Q ss_pred ceeEEEEcCCCCcEEEE-E-cC-CCeEEEEcCCCCCccCCCCCcccCCceeEEEccCCC-CCCCCCCCCC-C-ceeecCC
Q psy11898 20 FSFHRALDPESGRYMEV-H-TD-QPGIQFYTGNYIPEMSGKKGATYTKHCAYCFETQNF-PNAVNIHRSS-W-GKIQTCG 93 (124)
Q Consensus 20 ~~~a~L~s~~SG~~L~v-~-Td-qP~vqvYTgn~l~~~~g~~g~~~~~~~GiclE~Q~~-PDAiN~p~~~-~-~~l~~~~ 93 (124)
+..+.|.++..|+.+.+ + ++ .|.+++++.... .+. . -.+||||..- ||+.+...-. . ..|.|++
T Consensus 272 ~~~~~l~n~~~g~~~~l~f~~~~fP~l~~W~~~~~------~~~---g-yvl~LEP~T~~p~~~~~~~~~g~l~~L~PGe 341 (384)
T 3ty1_A 272 QTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDT------VKQ---G-YVTGIEPGTSYAYPVTIERKQKRVKQLQPGA 341 (384)
T ss_dssp EEEEEEECSSSSCEEEEEEETTTSCEEEEEEEESC------TTT---C-EEEEEEEESSCSSCHHHHHHTTCCEEECTTC
T ss_pred ceEEEEEecCCCcEEEEEEchHHCCHhHhhcccCC------CCC---c-cEEEEeCccCCCchhHHHHhCCCeEEECCCC
Confidence 34578999988888777 3 23 499999986421 111 1 3789999865 4553321111 2 2455555
Q ss_pred ceEEEEEEEEEEeeecccCCcc
Q psy11898 94 VLFIWSSADFVNCKPYSSEKPI 115 (124)
Q Consensus 94 ~~y~~~t~y~f~~~~~~~~~~~ 115 (124)
.++ |.+...+.....-|
T Consensus 342 -s~~----~~~~i~v~~~~~~v 358 (384)
T 3ty1_A 342 -SAQ----FDLTYTLLHDSAQV 358 (384)
T ss_dssp -EEE----EEEEEEEECSHHHH
T ss_pred -EEE----EEEEEEEecCHHHH
Confidence 666 44444444443333
No 17
>3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete}
Probab=48.05 E-value=15 Score=23.91 Aligned_cols=48 Identities=10% Similarity=0.083 Sum_probs=28.6
Q ss_pred EEcCCCCcEEEEEcCCCeEEEEcCCCCCcc---CCCCCcccCCceeEEEccC
Q psy11898 25 ALDPESGRYMEVHTDQPGIQFYTGNYIPEM---SGKKGATYTKHCAYCFETQ 73 (124)
Q Consensus 25 L~s~~SG~~L~v~TdqP~vqvYTgn~l~~~---~g~~g~~~~~~~GiclE~Q 73 (124)
|....||.+|++.-. ..|++|+.+.-+.- ....|......+|.||+..
T Consensus 47 i~~~~sg~CLd~~~~-~~v~~~~C~g~~~Q~W~~~~~g~i~~~~sg~cLdv~ 97 (118)
T 3a07_A 47 VRNAQTGRCLDSNYD-GAVYTLPCNGGSYQKWLFYSNGYIQNVETGRVLDSN 97 (118)
T ss_dssp CEETTTCCEEEECTT-CBEEEECCCCCGGGCEEECTTSCEEETTTCCEEEEC
T ss_pred EEECCCCcEEecCCC-CeEEEEccCCCccceEEEeCCCEEEECCCCcEEEcC
Confidence 455567888887533 35888887653220 1234555556678888764
No 18
>1so9_A Cytochrome C oxidase assembly protein CTAG; immunoglobulin-like fold, copper protein, structural proteomics in europe, spine; NMR {Sinorhizobium meliloti} SCOP: b.146.1.1 PDB: 1sp0_A
Probab=47.06 E-value=5.1 Score=29.41 Aligned_cols=45 Identities=18% Similarity=0.372 Sum_probs=34.5
Q ss_pred CcEEEEEcCCCeEEEEcCCCCCc-----------cCCCCCcccCCceeEEEccCCC
Q psy11898 31 GRYMEVHTDQPGIQFYTGNYIPE-----------MSGKKGATYTKHCAYCFETQNF 75 (124)
Q Consensus 31 G~~L~v~TdqP~vqvYTgn~l~~-----------~~g~~g~~~~~~~GiclE~Q~~ 75 (124)
-++|+|+--+.++.+|.+....+ .++.-|.-+.|=.+||||-|.+
T Consensus 53 q~~v~V~pGE~~~~~y~a~N~sd~~i~G~A~ynV~P~~a~~YF~KieCFCF~eQ~L 108 (164)
T 1so9_A 53 QRDIDVRIGETVQIMYRAKNLASTPTTGQATFNVTPMAAGAYFNKVQCFCFTETTL 108 (164)
T ss_dssp CSEEEECTTCCCCEEEEEEECSSSCEECCCEEEECSSSCSTTBTTSCCSSCSCCEE
T ss_pred eeEEEEcCCCeEEEEEEEECCCCCcEEEEECceeCHHHHhhhccceeeEcccCccc
Confidence 35778888888888888876643 2455677788999999999976
No 19
>1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A*
Probab=41.09 E-value=20 Score=23.29 Aligned_cols=46 Identities=9% Similarity=0.171 Sum_probs=30.5
Q ss_pred CCCcEEEEEcCCC--eEEEEcCCCCCcc---CCCCCcccCCceeEEEccCC
Q psy11898 29 ESGRYMEVHTDQP--GIQFYTGNYIPEM---SGKKGATYTKHCAYCFETQN 74 (124)
Q Consensus 29 ~SG~~L~v~TdqP--~vqvYTgn~l~~~---~g~~g~~~~~~~GiclE~Q~ 74 (124)
.+|.+|++..+.. .|++|+.+.-+.- ...+|......+|.||+...
T Consensus 55 ~s~~CLd~~~~~~g~~v~~~~c~~~~~Q~W~~~~~g~i~~~~sg~cLdv~~ 105 (130)
T 1knl_A 55 YGDKCLDAAGTSNGSKVQIYSCWGGDNQKWRLNSDGSVVGVQSGLCLDAVG 105 (130)
T ss_dssp TTTEEEEESCSSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGG
T ss_pred CCCcEEeCCCCCCCCEEEEEecCCCCcceEEECCCCeEEECCCCceEECCC
Confidence 5789999954333 5889988764321 12256666677899998764
No 20
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=38.45 E-value=18 Score=29.21 Aligned_cols=46 Identities=9% Similarity=0.158 Sum_probs=32.9
Q ss_pred CCCcEEEEEcCCC--eEEEEcCCCCCcc---CCCCCcccCCceeEEEccCC
Q psy11898 29 ESGRYMEVHTDQP--GIQFYTGNYIPEM---SGKKGATYTKHCAYCFETQN 74 (124)
Q Consensus 29 ~SG~~L~v~TdqP--~vqvYTgn~l~~~---~g~~g~~~~~~~GiclE~Q~ 74 (124)
.||.+|++.++.+ .|++|+++.-+.- ...+|......+|.||+...
T Consensus 361 ~sg~CLdv~~~~~G~~v~~~~C~g~~nQ~W~~~~~G~i~~~~sg~cLdv~~ 411 (436)
T 2d1z_A 361 YGDKCLDAAGTGNGTKVQIYSCWGGDNQKWRLNSDGSIVGVQSGLCLDAVG 411 (436)
T ss_dssp TTTEEEEESSSSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGG
T ss_pred CCCeEEEECCCCCCceEEEEecCCCCCceEEECCCCeEEECCCCCeEecCC
Confidence 5789999985544 4999999874331 13356666778999999764
No 21
>2ao3_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, hemagglutinin, R-type lectin, beta-trefoil fold, sugar complex; HET: MGC; 1.80A {Lumbricus terrestris} PDB: 2d12_A* 2zqo_A* 2zqn_A* 2dry_A* 2drz_A* 2ds0_A*
Probab=38.00 E-value=34 Score=22.33 Aligned_cols=51 Identities=8% Similarity=0.204 Sum_probs=32.3
Q ss_pred EEEcCCCCcEEEEEc----CCCeEEEEcCC---CCCc-c--CCCCCcccCCceeEEEccCC
Q psy11898 24 RALDPESGRYMEVHT----DQPGIQFYTGN---YIPE-M--SGKKGATYTKHCAYCFETQN 74 (124)
Q Consensus 24 ~L~s~~SG~~L~v~T----dqP~vqvYTgn---~l~~-~--~g~~g~~~~~~~GiclE~Q~ 74 (124)
.+.+..||..|+|.- +--.|++|+.+ .-.. . ...+|......+|.||+...
T Consensus 5 ~I~n~~sg~cLDv~~~~~~~g~~v~~~~c~~~~g~~nQ~W~~~~~~~i~~~~sg~cLdv~~ 65 (130)
T 2ao3_A 5 YIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASH 65 (130)
T ss_dssp EEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTSCEEETTTCCEEECSS
T ss_pred EEEECCCCcEEEeCCCCCCCCCEEEEEecCCCCCCcccEEEEcCCeEEEECCCCEEEEecC
Confidence 466778999999953 22359999987 2211 0 12245444556799998754
No 22
>2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A*
Probab=31.61 E-value=62 Score=21.58 Aligned_cols=49 Identities=10% Similarity=0.201 Sum_probs=32.4
Q ss_pred EEEcCCCCcEEEEEc----CCCeEEEEcCCCCCc------cCCCCCcccCCceeEEEcc
Q psy11898 24 RALDPESGRYMEVHT----DQPGIQFYTGNYIPE------MSGKKGATYTKHCAYCFET 72 (124)
Q Consensus 24 ~L~s~~SG~~L~v~T----dqP~vqvYTgn~l~~------~~g~~g~~~~~~~GiclE~ 72 (124)
.|.+..||+.|+|.- +--.|++|+.+.-+. .....|......+|.||+.
T Consensus 5 ~i~n~~SGk~LDV~g~s~~~Ga~v~~w~~~~~~~~~nQ~W~~~~~g~i~~~~sg~cLD~ 63 (130)
T 2dry_A 5 YIKSELNGKVLDIGGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDA 63 (130)
T ss_dssp EEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTCCEEETTTCCEEEC
T ss_pred EEEECCCCCEEEECCCCcCCCceEEEEEecCCCCchheEEEEecceeEEEccCCeeEEe
Confidence 477888999999963 223589998775321 0123455555678999975
No 23
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B*
Probab=29.61 E-value=65 Score=23.57 Aligned_cols=45 Identities=9% Similarity=0.114 Sum_probs=31.5
Q ss_pred CCcEEEEEcCCC--eEEEEcCCCC--Cc---cCCCCCcccCCceeEEEccCC
Q psy11898 30 SGRYMEVHTDQP--GIQFYTGNYI--PE---MSGKKGATYTKHCAYCFETQN 74 (124)
Q Consensus 30 SG~~L~v~TdqP--~vqvYTgn~l--~~---~~g~~g~~~~~~~GiclE~Q~ 74 (124)
+|.+|++..+.+ .|++|+.+.. +. ....+|......+|.||+...
T Consensus 52 ~g~CLd~~g~~~g~~v~~~~c~~~~~~~Q~W~~~~~g~i~n~~sg~cLd~~~ 103 (258)
T 3c9z_A 52 MGKCMTANGLNNGSNIVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPR 103 (258)
T ss_dssp TTEEEEEESSSTTCEEEEECTTTSCGGGSCCBCCTTSCCBCTTTCCEEECSS
T ss_pred CCeEEcccCCCCCCEEEEEeCCCCCCcCCEEEEcCCCeEEECCCCcEEecCC
Confidence 689999975333 5999998875 22 122356667788999998754
No 24
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=27.73 E-value=35 Score=27.08 Aligned_cols=44 Identities=7% Similarity=0.046 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCCeEEEEcCCCCCcc----C-CCCCcccCCceeEEEccC
Q psy11898 30 SGRYMEVHTDQPGIQFYTGNYIPEM----S-GKKGATYTKHCAYCFETQ 73 (124)
Q Consensus 30 SG~~L~v~TdqP~vqvYTgn~l~~~----~-g~~g~~~~~~~GiclE~Q 73 (124)
+|.+|++.++--.|++|+++..... . ..+|......+|.||+..
T Consensus 392 ~~~Cld~~~~g~~v~l~~C~~~~~~Q~W~~~~~~g~i~~~~sg~CLd~~ 440 (472)
T 1xhb_A 392 DDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKA 440 (472)
T ss_dssp TTEEEECCSTTCCCEEEECCTTCGGGCEEEETTTTEEEESSSCEEEESC
T ss_pred cceEEeecCCCceEEEEeCCCCCcCceEEEeCCCCeEEeCCCCeeEccc
Confidence 3678888766667899998873321 1 225666677899999976
No 25
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=27.14 E-value=31 Score=27.83 Aligned_cols=44 Identities=7% Similarity=0.006 Sum_probs=30.2
Q ss_pred CCcEEEEEcCC--CeEEEEcCCCCCcc-----CCCCCcccCCceeEEEccC
Q psy11898 30 SGRYMEVHTDQ--PGIQFYTGNYIPEM-----SGKKGATYTKHCAYCFETQ 73 (124)
Q Consensus 30 SG~~L~v~Tdq--P~vqvYTgn~l~~~-----~g~~g~~~~~~~GiclE~Q 73 (124)
+|.+|++.++. -.|++++++..... ...+|......+|.||+..
T Consensus 423 ~~~Cld~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~i~~~~sg~CLd~~ 473 (501)
T 2ffu_A 423 MDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSR 473 (501)
T ss_dssp TTEEEECSCCSTTCBCEEEECCTTCGGGCEEEETTTTEEEETTSSEEEECT
T ss_pred ccccceeccCCCCCeEEEEecCCCCcCceEEEECCCCeEEeCCCCeEEeee
Confidence 57888886443 35899998864331 1225566778899999975
No 26
>2xb2_G Regulator of nonsense transcripts 3B; EXON junction complex, nonsense-mediated mRNA decay, translation, UPF3B, hydrolase; HET: ANP; 3.40A {Homo sapiens}
Probab=24.37 E-value=25 Score=21.64 Aligned_cols=9 Identities=44% Similarity=1.084 Sum_probs=8.3
Q ss_pred CCCeEEEEc
Q psy11898 39 DQPGIQFYT 47 (124)
Q Consensus 39 dqP~vqvYT 47 (124)
|.|+||||-
T Consensus 12 DRP~~qiYq 20 (60)
T 2xb2_G 12 DRPAMQLYQ 20 (60)
T ss_pred CCceeeeeC
Confidence 899999996
No 27
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B*
Probab=20.87 E-value=89 Score=22.98 Aligned_cols=45 Identities=4% Similarity=0.087 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCC--eEEEEcC-CCCCc---cCCCCCcccCCceeEEEccC
Q psy11898 29 ESGRYMEVHTDQP--GIQFYTG-NYIPE---MSGKKGATYTKHCAYCFETQ 73 (124)
Q Consensus 29 ~SG~~L~v~TdqP--~vqvYTg-n~l~~---~~g~~g~~~~~~~GiclE~Q 73 (124)
.++.+|++....+ -|++++. +.-.. ....+|......+|.||+..
T Consensus 186 ~~~~CLd~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~g~i~~~~sg~CLdv~ 236 (262)
T 2aai_B 186 NRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVR 236 (262)
T ss_dssp STTEEEEECCSSCSSCEEEEESTTCCTTSCCEECTTSCEECTTTCCEEEEG
T ss_pred CCCceEccCCCCCCCeEEEEcCCCCCCcCeEEECCCCcEEECCCCeEEeec
Confidence 4688999965443 4889988 32222 11345666778899999965
Done!