BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11901
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q792Q4|CRIPT_RAT Cysteine-rich PDZ-binding protein OS=Rattus norvegicus GN=Cript
PE=1 SV=1
Length = 101
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|O70333|CRIPT_MOUSE Cysteine-rich PDZ-binding protein OS=Mus musculus GN=Cript PE=1
SV=1
Length = 101
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|Q9P021|CRIPT_HUMAN Cysteine-rich PDZ-binding protein OS=Homo sapiens GN=CRIPT PE=1
SV=1
Length = 101
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|Q3ZC66|CRIPT_BOVIN Cysteine-rich PDZ-binding protein OS=Bos taurus GN=CRIPT PE=1 SV=1
Length = 101
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|Q6NU28|CRIPT_XENLA Cysteine-rich PDZ-binding protein OS=Xenopus laevis GN=cript PE=3
SV=1
Length = 101
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
MVC KCEKKLG VITPD WKSG+RNT ESGGR++ ENKALT+ ARFNPY + KF C+I
Sbjct: 1 MVCDKCEKKLGTVITPDTWKSGARNTTESGGRKLNENKALTSKTARFNPYGKNKFAICRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGICAMCGKK+L+ KNYKQ++
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLETKNYKQTSV 101
>sp|Q567Z6|CRIPT_DANRE Cysteine-rich PDZ-binding protein OS=Danio rerio GN=cript PE=3 SV=1
Length = 101
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 59
MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENK LT+ KARF+PY + F +C+I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKMLTSKKARFDPYGKSGFATCRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGICAMCGKK++D KNYKQ++
Sbjct: 61 CKSSVHQSGSHYCQGCAYKKGICAMCGKKVIDTKNYKQTSV 101
>sp|Q5ZKB6|CRIPT_CHICK Cysteine-rich PDZ-binding protein OS=Gallus gallus GN=CRIPT PE=3
SV=1
Length = 101
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 59
MVC KCE+KLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF C+I
Sbjct: 1 MVCEKCERKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFAICRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGIC+MCGKK+LD KNYKQ++
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICSMCGKKVLDTKNYKQTSV 101
>sp|Q1WCC0|CRIPT_ICTPU Cysteine-rich PDZ-binding protein OS=Ictalurus punctatus GN=cript
PE=3 SV=1
Length = 101
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 59
MVC KCEKKLG+VITPD WK G+RNT ESGGR+I ENK LT+ KA F+PY + F +C+I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKINENKMLTSKKAGFDPYGKSGFSTCRI 60
Query: 60 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 100
C+ VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61 CKSSVHQSGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|B6YPZ6|RPOC_AZOPC DNA-directed RNA polymerase subunit beta' OS=Azobacteroides
pseudotrichonymphae genomovar. CFP2 GN=rpoC PE=3 SV=1
Length = 1405
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 18/90 (20%)
Query: 1 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 60
+V S E+ LG+V D SR I G I E+KAL ++ I
Sbjct: 828 VVVSLYERILGRVSVCDVQHPESRKIIVYAGEEISEDKALA------------IQNSSIE 875
Query: 61 RQKVHQVGSHYCQACAYKKGICAMC-GKKL 89
R ++ V C KKG+C C G+ L
Sbjct: 876 RVEIRSV-----LTCESKKGVCVKCYGRNL 900
>sp|Q9W7L0|ENOA_PYTRG Alpha-enolase OS=Python regius PE=2 SV=3
Length = 434
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 17 DNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGS--HYCQA 74
D+W + + T ESG + +G++ +T K R Q+ +SC KV+Q+GS QA
Sbjct: 299 DDWPAWKKFTAESGIQVVGDDLTVTNPK-RIAKAVQE-KSCNCLLLKVNQIGSVTESLQA 356
Query: 75 C 75
C
Sbjct: 357 C 357
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,020,708
Number of Sequences: 539616
Number of extensions: 1302260
Number of successful extensions: 3657
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3628
Number of HSP's gapped (non-prelim): 32
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)