Query psy11901
Match_columns 100
No_of_seqs 101 out of 106
Neff 3.7
Searched_HMMs 13730
Date Fri Aug 16 21:52:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11901.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11901hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j2oa1 g.39.1.3 (A:1-30) Rhom 76.9 0.42 3.1E-05 25.3 1.1 11 81-91 5-15 (30)
2 d1jm7b_ g.44.1.1 (B:) bard1 RI 76.6 0.63 4.6E-05 28.2 2.0 35 56-90 24-66 (97)
3 d1rutx1 g.39.1.3 (X:19-48) LIM 74.6 0.49 3.5E-05 25.0 0.9 11 81-91 4-14 (30)
4 d1ibia2 g.39.1.3 (A:145-175) C 67.6 0.78 5.7E-05 24.3 0.7 13 81-93 2-14 (31)
5 d1jm7a_ g.44.1.1 (A:) brca1 RI 65.8 0.92 6.7E-05 27.7 0.9 35 56-90 23-69 (103)
6 d1bora_ g.44.1.1 (A:) Acute pr 65.2 2.1 0.00016 24.0 2.4 38 55-92 7-50 (56)
7 d1k3xa3 g.39.1.8 (A:223-262) E 59.4 1.1 8.1E-05 24.3 0.4 30 46-75 4-38 (40)
8 d1chca_ g.44.1.1 (A:) Immediat 56.2 2.2 0.00016 24.2 1.4 40 54-93 5-54 (68)
9 d1tjla2 g.39.1.13 (A:111-151) 53.1 2.1 0.00016 23.1 0.9 11 80-90 2-12 (41)
10 d2c2la2 g.44.1.2 (A:225-304) S 51.8 2.2 0.00016 24.8 0.9 36 56-91 9-54 (80)
11 d1ubdc2 g.37.1.1 (C:323-350) Y 51.7 1.3 9.1E-05 23.0 -0.3 17 80-96 3-19 (28)
12 d2c6aa1 g.41.11.1 (A:290-335) 51.1 2.3 0.00016 24.3 0.8 21 55-76 14-34 (46)
13 d2dloa1 g.39.1.3 (A:8-42) Thyr 50.6 2.6 0.00019 22.7 1.0 12 80-91 9-20 (35)
14 d2jnea1 g.41.18.1 (A:1-71) Hyp 48.6 1.6 0.00012 26.8 -0.1 38 55-92 3-44 (71)
15 d1tdza3 g.39.1.8 (A:225-271) D 47.3 2.6 0.00019 23.2 0.7 31 45-75 9-44 (47)
16 d1fbva4 g.44.1.1 (A:356-434) C 43.4 3.2 0.00023 24.3 0.7 40 54-93 23-72 (79)
17 d1ee8a3 g.39.1.8 (A:211-266) D 42.6 4.5 0.00033 22.9 1.2 32 44-75 15-51 (56)
18 d1k82a3 g.39.1.8 (A:225-268) D 37.5 5 0.00036 21.8 0.8 31 45-75 7-42 (44)
19 d2baya1 g.44.1.2 (A:1-56) Pre- 37.0 2.3 0.00017 23.4 -0.7 24 67-90 19-46 (56)
20 d1rutx3 g.39.1.3 (X:83-113) LI 36.8 4.3 0.00031 21.2 0.4 14 79-92 2-15 (31)
21 d2epra1 g.37.1.1 (A:350-384) P 36.6 3.6 0.00026 22.1 0.1 13 80-92 6-18 (35)
22 d2cr8a1 g.41.11.1 (A:8-48) MDM 35.8 4.8 0.00035 22.3 0.5 19 56-75 6-24 (41)
23 d1r2za3 g.39.1.8 (A:229-274) D 35.2 5.3 0.00039 21.8 0.7 32 44-75 8-44 (46)
24 d1x3ha1 g.39.1.3 (A:8-42) Leup 33.2 7.1 0.00052 20.3 1.0 11 81-91 10-20 (35)
25 d1e7la2 d.4.1.5 (A:1-103) Reco 28.7 9.5 0.00069 24.2 1.2 13 78-90 19-31 (103)
26 d1g47a2 g.39.1.3 (A:36-70) Pin 25.7 13 0.00091 19.4 1.1 16 81-96 2-17 (35)
27 d4cpai_ g.3.2.1 (I:) Carboxype 24.7 12 0.00086 20.1 0.9 24 59-82 10-33 (37)
28 d2dara2 g.39.1.3 (A:8-52) PDZ 23.8 13 0.00098 20.7 1.1 12 80-91 19-30 (45)
29 d1iyma_ g.44.1.1 (A:) EL5 RING 22.4 13 0.00098 20.1 0.9 23 68-90 28-54 (55)
30 d1kbea_ g.49.1.1 (A:) Kinase s 22.0 5.5 0.0004 21.9 -0.9 21 56-78 16-36 (49)
31 d1u5sb1 g.39.1.3 (B:72-102) Pi 21.4 11 0.00083 19.6 0.4 12 80-91 6-17 (31)
32 d1g25a_ g.44.1.1 (A:) TFIIH Ma 21.3 13 0.00093 20.6 0.6 37 55-91 4-55 (65)
33 d1s24a_ g.41.5.1 (A:) Two-iron 20.5 11 0.00084 21.6 0.3 11 76-86 1-11 (56)
34 d1wgma_ g.44.1.2 (A:) Ubiquiti 20.5 9.7 0.0007 23.0 -0.1 36 55-90 23-68 (98)
35 d2cu8a1 g.39.1.3 (A:8-37) Cyst 20.3 16 0.0011 18.8 0.8 11 80-90 3-13 (30)
No 1
>d1j2oa1 g.39.1.3 (A:1-30) Rhombotin-2 (Lmo2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.85 E-value=0.42 Score=25.30 Aligned_cols=11 Identities=27% Similarity=0.721 Sum_probs=10.2
Q ss_pred cccccCccccc
Q psy11901 81 ICAMCGKKLLD 91 (100)
Q Consensus 81 iCamCGKki~d 91 (100)
.||.||++|+|
T Consensus 5 ~CaGC~~~I~D 15 (30)
T d1j2oa1 5 TCGGCQQNIGD 15 (30)
T ss_dssp CBSSSCSCBCS
T ss_pred ccCCCCCcchH
Confidence 59999999998
No 2
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.56 E-value=0.63 Score=28.20 Aligned_cols=35 Identities=17% Similarity=0.519 Sum_probs=25.5
Q ss_pred cchhhhhhhc------cCCCccCcccc--cccccccccCcccc
Q psy11901 56 SCKICRQKVH------QVGSHYCQACA--YKKGICAMCGKKLL 90 (100)
Q Consensus 56 ~C~~CK~~v~------q~g~~YCq~CA--YkkGiCamCGKki~ 90 (100)
.|.||...+. .=||.||..|. +-...|..|...+.
T Consensus 24 ~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (97)
T d1jm7b_ 24 RCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (97)
T ss_dssp SCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred CCccCCchhhcCceeCCCCCchhHHHHHHHHhccccccCCcCc
Confidence 6888876432 22899999994 45567999998764
No 3
>d1rutx1 g.39.1.3 (X:19-48) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.62 E-value=0.49 Score=24.99 Aligned_cols=11 Identities=55% Similarity=1.044 Sum_probs=10.2
Q ss_pred cccccCccccc
Q psy11901 81 ICAMCGKKLLD 91 (100)
Q Consensus 81 iCamCGKki~d 91 (100)
.||.||.+|.|
T Consensus 4 ~CaGC~~~I~D 14 (30)
T d1rutx1 4 RCAGCGGKIAD 14 (30)
T ss_dssp BBTTTCCBCCC
T ss_pred ccCCCCCccch
Confidence 69999999998
No 4
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=67.59 E-value=0.78 Score=24.30 Aligned_cols=13 Identities=46% Similarity=0.853 Sum_probs=10.6
Q ss_pred cccccCccccccc
Q psy11901 81 ICAMCGKKLLDVK 93 (100)
Q Consensus 81 iCamCGKki~dt~ 93 (100)
.||+|||.+-.|.
T Consensus 2 rca~cgk~lestt 14 (31)
T d1ibia2 2 RCAKCGKSLESTT 14 (31)
T ss_dssp ECSSSCCEECSSC
T ss_pred ccccccCccccce
Confidence 4999999987664
No 5
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.78 E-value=0.92 Score=27.70 Aligned_cols=35 Identities=26% Similarity=0.823 Sum_probs=25.4
Q ss_pred cchhhhhhhcc-----CCCccCcccccc-----c--ccccccCcccc
Q psy11901 56 SCKICRQKVHQ-----VGSHYCQACAYK-----K--GICAMCGKKLL 90 (100)
Q Consensus 56 ~C~~CK~~v~q-----~g~~YCq~CAYk-----k--GiCamCGKki~ 90 (100)
.|.||...+.. =||.||..|-+. + ..|++|...+.
T Consensus 23 ~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (103)
T d1jm7a_ 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (103)
T ss_dssp SCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCC
Confidence 57777765543 389999999653 2 27999998775
No 6
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.23 E-value=2.1 Score=24.00 Aligned_cols=38 Identities=16% Similarity=0.364 Sum_probs=27.0
Q ss_pred ccchhhhhhhccC-----CCccCccccccc-ccccccCcccccc
Q psy11901 55 ESCKICRQKVHQV-----GSHYCQACAYKK-GICAMCGKKLLDV 92 (100)
Q Consensus 55 ~~C~~CK~~v~q~-----g~~YCq~CAYkk-GiCamCGKki~dt 92 (100)
-.|.||...+.++ ||.||..|.-+. ..|.+|...|.-.
T Consensus 7 l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~~~~CP~Cr~~~~~~ 50 (56)
T d1bora_ 7 LRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLG 50 (56)
T ss_dssp SSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSSCC
T ss_pred CCCcccCcccCCCEEecCCCHHhHHHHHcCCCcCcCCCCcccCC
Confidence 3677776654332 889999997544 4899999888643
No 7
>d1k3xa3 g.39.1.8 (A:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=59.40 E-value=1.1 Score=24.31 Aligned_cols=30 Identities=23% Similarity=0.656 Sum_probs=21.1
Q ss_pred hcCCCcccCccchhhhhhhcc-----CCCccCccc
Q psy11901 46 RFNPYTQKFESCKICRQKVHQ-----VGSHYCQAC 75 (100)
Q Consensus 46 r~~Py~~~~~~C~~CK~~v~q-----~g~~YCq~C 75 (100)
+|.-|+.....|..|.+.|.. -...||..|
T Consensus 4 ~~~VYgR~g~pC~~C~~~I~~~~~~gR~t~~Cp~C 38 (40)
T d1k3xa3 4 RFKVFHRDGEPCERCGSIIEKTTLSSRPFYWCPGC 38 (40)
T ss_dssp CCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred EEEEeCCCCCccCcCCCEEEEEEECCCCCEEChhh
Confidence 577788778899999987632 234567666
No 8
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=56.19 E-value=2.2 Score=24.19 Aligned_cols=40 Identities=23% Similarity=0.572 Sum_probs=27.4
Q ss_pred Cccchhhhhhhcc------CCCccCccccc----ccccccccCccccccc
Q psy11901 54 FESCKICRQKVHQ------VGSHYCQACAY----KKGICAMCGKKLLDVK 93 (100)
Q Consensus 54 ~~~C~~CK~~v~q------~g~~YCq~CAY----kkGiCamCGKki~dt~ 93 (100)
...|.||-..+.+ =||.||..|.. .+..|.+|-..|.++.
T Consensus 5 ~d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~~~~ 54 (68)
T d1chca_ 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVV 54 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCEE
T ss_pred CCCCccCCcCccCCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchHhhc
Confidence 3467777554322 26778888874 6778999998886543
No 9
>d1tjla2 g.39.1.13 (A:111-151) DnaK suppressor protein DksA, zinc finger domain {Escherichia coli [TaxId: 562]}
Probab=53.06 E-value=2.1 Score=23.09 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=9.9
Q ss_pred ccccccCcccc
Q psy11901 80 GICAMCGKKLL 90 (100)
Q Consensus 80 GiCamCGKki~ 90 (100)
|+|-.||+.|-
T Consensus 2 G~C~~Cg~~I~ 12 (41)
T d1tjla2 2 GYCESCGVEIG 12 (41)
T ss_dssp SBCSSSSCBCC
T ss_pred cchhhCcCccC
Confidence 79999999985
No 10
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.82 E-value=2.2 Score=24.76 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=24.4
Q ss_pred cchhhhhhhcc-----CCCccCcccccc-----cccccccCccccc
Q psy11901 56 SCKICRQKVHQ-----VGSHYCQACAYK-----KGICAMCGKKLLD 91 (100)
Q Consensus 56 ~C~~CK~~v~q-----~g~~YCq~CAYk-----kGiCamCGKki~d 91 (100)
.|.||..-... -||.||+.|-.+ ...|..|+..|..
T Consensus 9 ~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~ 54 (80)
T d2c2la2 9 CGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 54 (80)
T ss_dssp BCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cCcCcCchhhhhcccCCcCeecHHHHHHHHhcCCccCCCccccccc
Confidence 56666653322 389999999532 3479999998753
No 11
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.72 E-value=1.3 Score=22.97 Aligned_cols=17 Identities=35% Similarity=0.864 Sum_probs=12.6
Q ss_pred ccccccCcccccccccc
Q psy11901 80 GICAMCGKKLLDVKNYK 96 (100)
Q Consensus 80 GiCamCGKki~dt~~yk 96 (100)
-+|+-|||....-+..+
T Consensus 3 hvc~ecgkaf~essklk 19 (28)
T d1ubdc2 3 HVCAECGKAFVESSKLK 19 (28)
T ss_dssp EECTTTCCEESSHHHHH
T ss_pred chHHHHhHHHHHHHHHH
Confidence 37999999887655443
No 12
>d2c6aa1 g.41.11.1 (A:290-335) MDM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.10 E-value=2.3 Score=24.27 Aligned_cols=21 Identities=19% Similarity=0.517 Sum_probs=16.5
Q ss_pred ccchhhhhhhccCCCccCcccc
Q psy11901 55 ESCKICRQKVHQVGSHYCQACA 76 (100)
Q Consensus 55 ~~C~~CK~~v~q~g~~YCq~CA 76 (100)
=+|..|+ +...|..-||+.|=
T Consensus 14 WkC~~C~-~~N~Pl~ryC~rCW 34 (46)
T d2c6aa1 14 WKCTSCN-EMNPPLPSHCNRCW 34 (46)
T ss_dssp EECTTTC-CEECSSCSSCTTTC
T ss_pred ccCcccc-ccCCcchhHhHHHH
Confidence 4899997 56666889999983
No 13
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.64 E-value=2.6 Score=22.74 Aligned_cols=12 Identities=42% Similarity=0.963 Sum_probs=10.4
Q ss_pred ccccccCccccc
Q psy11901 80 GICAMCGKKLLD 91 (100)
Q Consensus 80 GiCamCGKki~d 91 (100)
-.|+.||..|+|
T Consensus 9 EkC~~C~~~I~d 20 (35)
T d2dloa1 9 EKCATCSQPILD 20 (35)
T ss_dssp CBCTTTCCBCCS
T ss_pred HHHHHhchHHHH
Confidence 379999999997
No 14
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=48.59 E-value=1.6 Score=26.82 Aligned_cols=38 Identities=26% Similarity=0.672 Sum_probs=29.9
Q ss_pred ccchhhhhhhcc-CCCccCcccc--c-ccccccccCcccccc
Q psy11901 55 ESCKICRQKVHQ-VGSHYCQACA--Y-KKGICAMCGKKLLDV 92 (100)
Q Consensus 55 ~~C~~CK~~v~q-~g~~YCq~CA--Y-kkGiCamCGKki~dt 92 (100)
..|..|.+.+.+ .|+.+|..|. | +.+.|.-|+..+--.
T Consensus 3 ~~CP~C~~eL~~~~~~~~C~~C~~~~~~~a~CPdC~~~Le~L 44 (71)
T d2jnea1 3 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVL 44 (71)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEE
T ss_pred CcCCCccCcccccCCCEehhhhhhhheeEEeCCccccHHHHH
Confidence 479999999976 5778899987 3 467999999987643
No 15
>d1tdza3 g.39.1.8 (A:225-271) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=47.33 E-value=2.6 Score=23.24 Aligned_cols=31 Identities=26% Similarity=0.752 Sum_probs=21.7
Q ss_pred hhcCCCcccCccchhhhhhh-----ccCCCccCccc
Q psy11901 45 ARFNPYTQKFESCKICRQKV-----HQVGSHYCQAC 75 (100)
Q Consensus 45 ~r~~Py~~~~~~C~~CK~~v-----~q~g~~YCq~C 75 (100)
++|.-|+.....|..|...| .+-+..||..|
T Consensus 9 ~~l~VYgR~g~~C~~C~~~I~~~~~~gR~t~~Cp~C 44 (47)
T d1tdza3 9 NELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVC 44 (47)
T ss_dssp GGCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred ceEEEeCCCCCCcCCCCcEEEEEEECCcccEECccc
Confidence 56778887677899998765 33345677766
No 16
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.37 E-value=3.2 Score=24.31 Aligned_cols=40 Identities=25% Similarity=0.679 Sum_probs=29.9
Q ss_pred Cccchhhhhhhcc-----CCCccCccccc-----ccccccccCccccccc
Q psy11901 54 FESCKICRQKVHQ-----VGSHYCQACAY-----KKGICAMCGKKLLDVK 93 (100)
Q Consensus 54 ~~~C~~CK~~v~q-----~g~~YCq~CAY-----kkGiCamCGKki~dt~ 93 (100)
...|.||...... =||.||..|.. ....|++|-+.|.++.
T Consensus 23 ~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~ 72 (79)
T d1fbva4 23 FQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 72 (79)
T ss_dssp TTBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCC
T ss_pred CCCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCCc
Confidence 3579999876543 48999999973 3346999999997654
No 17
>d1ee8a3 g.39.1.8 (A:211-266) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=42.61 E-value=4.5 Score=22.88 Aligned_cols=32 Identities=28% Similarity=0.743 Sum_probs=22.1
Q ss_pred hhhcCCCcccCccchhhhhhhc-----cCCCccCccc
Q psy11901 44 KARFNPYTQKFESCKICRQKVH-----QVGSHYCQAC 75 (100)
Q Consensus 44 k~r~~Py~~~~~~C~~CK~~v~-----q~g~~YCq~C 75 (100)
..+|.-|+.....|..|+..|. +-...||..|
T Consensus 15 q~~~~VY~r~g~~C~~C~~~I~~~~~~~R~t~~Cp~C 51 (56)
T d1ee8a3 15 QTRHAVYGREGLPCPACGRPVERRVVAGRGTHFCPTC 51 (56)
T ss_dssp GGGCSSTTCTTSBCTTTCCBCEEEESSSCEEEECTTT
T ss_pred cceEEEecCCCcccccCCceEEEEEECCCcCEECcCc
Confidence 4567788877778999988663 2234677766
No 18
>d1k82a3 g.39.1.8 (A:225-268) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=37.51 E-value=5 Score=21.77 Aligned_cols=31 Identities=29% Similarity=0.799 Sum_probs=20.8
Q ss_pred hhcCCCcccCccchhhhhhhc-----cCCCccCccc
Q psy11901 45 ARFNPYTQKFESCKICRQKVH-----QVGSHYCQAC 75 (100)
Q Consensus 45 ~r~~Py~~~~~~C~~CK~~v~-----q~g~~YCq~C 75 (100)
+.|.-|+-....|..|.+.|. +-+..||..|
T Consensus 7 ~~~~VYgR~g~~C~~C~~~I~~~~~~~R~t~~Cp~C 42 (44)
T d1k82a3 7 QELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQC 42 (44)
T ss_dssp GGCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred ceeEEeCCCCCCcCCCCCEEEEEEECCcccEEChhh
Confidence 567778876778998887663 2234566665
No 19
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.03 E-value=2.3 Score=23.41 Aligned_cols=24 Identities=8% Similarity=0.044 Sum_probs=19.2
Q ss_pred CCCccCccccc----ccccccccCcccc
Q psy11901 67 VGSHYCQACAY----KKGICAMCGKKLL 90 (100)
Q Consensus 67 ~g~~YCq~CAY----kkGiCamCGKki~ 90 (100)
-|+.||..|.+ +.+.|.+||..+.
T Consensus 19 cGh~fc~~cI~~~l~~~~~CP~c~~~l~ 46 (56)
T d2baya1 19 SRTIFEKSLLEQYVKDTGNDPITNEPLS 46 (56)
T ss_dssp TTEEEEHHHHHHHHHHHSBCTTTCCBCC
T ss_pred CCCcccHHHHHHHHhhccCCCccCCcCC
Confidence 38888888854 5789999998875
No 20
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.79 E-value=4.3 Score=21.24 Aligned_cols=14 Identities=29% Similarity=0.873 Sum_probs=11.2
Q ss_pred cccccccCcccccc
Q psy11901 79 KGICAMCGKKLLDV 92 (100)
Q Consensus 79 kGiCamCGKki~dt 92 (100)
-|.|+.||..|.-+
T Consensus 2 ~g~Ca~C~~~I~~~ 15 (31)
T d1rutx3 2 SGACSACGQSIPAS 15 (31)
T ss_dssp CEECTTTCCEECTT
T ss_pred CcccccccCcCChh
Confidence 47899999998743
No 21
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.65 E-value=3.6 Score=22.07 Aligned_cols=13 Identities=46% Similarity=0.948 Sum_probs=10.9
Q ss_pred ccccccCcccccc
Q psy11901 80 GICAMCGKKLLDV 92 (100)
Q Consensus 80 GiCamCGKki~dt 92 (100)
-.|-||||...|+
T Consensus 6 ~~ce~cgk~frdv 18 (35)
T d2epra1 6 VACEICGKIFRDV 18 (35)
T ss_dssp EEETTTTEEESSH
T ss_pred hhHHHHHHHHHHH
Confidence 4799999998876
No 22
>d2cr8a1 g.41.11.1 (A:8-48) MDM4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.81 E-value=4.8 Score=22.33 Aligned_cols=19 Identities=32% Similarity=0.941 Sum_probs=14.6
Q ss_pred cchhhhhhhccCCCccCccc
Q psy11901 56 SCKICRQKVHQVGSHYCQAC 75 (100)
Q Consensus 56 ~C~~CK~~v~q~g~~YCq~C 75 (100)
+|..| .+...|..-||+.|
T Consensus 6 kC~~C-~~~N~Pl~ryC~rC 24 (41)
T d2cr8a1 6 QCTEC-KKFNSPSKRYCFRC 24 (41)
T ss_dssp ECSSS-CCEECSSCCBCTTT
T ss_pred ecCcc-cccCCcchhHHHHH
Confidence 68888 45556678999998
No 23
>d1r2za3 g.39.1.8 (A:229-274) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=35.18 E-value=5.3 Score=21.75 Aligned_cols=32 Identities=28% Similarity=0.757 Sum_probs=21.0
Q ss_pred hhhcCCCcccCccchhhhhhhc-----cCCCccCccc
Q psy11901 44 KARFNPYTQKFESCKICRQKVH-----QVGSHYCQAC 75 (100)
Q Consensus 44 k~r~~Py~~~~~~C~~CK~~v~-----q~g~~YCq~C 75 (100)
.++|.-|+-....|..|.+.|. +-...||..|
T Consensus 8 q~~~~VYgR~g~~C~~C~~~I~~~~~~gR~t~~Cp~C 44 (46)
T d1r2za3 8 QHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRC 44 (46)
T ss_dssp GGGCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred cceeEEeCCCCCccCCCCCeEEEEEECCCcCEEChhh
Confidence 3567778766778988887663 2234566665
No 24
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.19 E-value=7.1 Score=20.32 Aligned_cols=11 Identities=27% Similarity=0.875 Sum_probs=8.1
Q ss_pred cccccCccccc
Q psy11901 81 ICAMCGKKLLD 91 (100)
Q Consensus 81 iCamCGKki~d 91 (100)
+|+-|++.|++
T Consensus 10 kC~~C~~~I~g 20 (35)
T d1x3ha1 10 KCGGCNRPVLE 20 (35)
T ss_dssp BCTTTCCBCCS
T ss_pred hhhhcCCcccc
Confidence 67778887764
No 25
>d1e7la2 d.4.1.5 (A:1-103) Recombination endonuclease VII, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=28.71 E-value=9.5 Score=24.19 Aligned_cols=13 Identities=31% Similarity=0.897 Sum_probs=8.0
Q ss_pred ccccccccCcccc
Q psy11901 78 KKGICAMCGKKLL 90 (100)
Q Consensus 78 kkGiCamCGKki~ 90 (100)
+.|.|++||..+.
T Consensus 19 Q~g~C~IC~~~~~ 31 (103)
T d1e7la2 19 QNGKCLICQRELN 31 (103)
T ss_dssp TTTBCTTTCCBCC
T ss_pred hCCcCCCCCCCcc
Confidence 4456777776653
No 26
>d1g47a2 g.39.1.3 (A:36-70) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.75 E-value=13 Score=19.37 Aligned_cols=16 Identities=25% Similarity=0.588 Sum_probs=12.5
Q ss_pred cccccCcccccccccc
Q psy11901 81 ICAMCGKKLLDVKNYK 96 (100)
Q Consensus 81 iCamCGKki~dt~~yk 96 (100)
.|+.|++.+.+...|-
T Consensus 2 ~C~~C~~~f~~~~F~e 17 (35)
T d1g47a2 2 VCAQCFQQFPEGLFYE 17 (35)
T ss_dssp CCTTTCCCCGGGCSEE
T ss_pred CCCCCcCCCCCCCeEE
Confidence 5889999988777653
No 27
>d4cpai_ g.3.2.1 (I:) Carboxypeptidase A inhibitor {Potato [TaxId: 4113]}
Probab=24.73 E-value=12 Score=20.07 Aligned_cols=24 Identities=29% Similarity=0.709 Sum_probs=18.1
Q ss_pred hhhhhhccCCCccCcccccccccc
Q psy11901 59 ICRQKVHQVGSHYCQACAYKKGIC 82 (100)
Q Consensus 59 ~CK~~v~q~g~~YCq~CAYkkGiC 82 (100)
-|++.-.-.|+.+||.|--..+.|
T Consensus 10 pc~t~ddcsg~~fcqacw~~a~tc 33 (37)
T d4cpai_ 10 PCKTHDDCSGAWFCQACWNSARTC 33 (37)
T ss_dssp BCSSSSSSCCCSSCCEEETTTTEE
T ss_pred CcccccCccchHHHHHHHHhcccc
Confidence 466666556899999998777765
No 28
>d2dara2 g.39.1.3 (A:8-52) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.85 E-value=13 Score=20.67 Aligned_cols=12 Identities=25% Similarity=0.719 Sum_probs=8.6
Q ss_pred ccccccCccccc
Q psy11901 80 GICAMCGKKLLD 91 (100)
Q Consensus 80 GiCamCGKki~d 91 (100)
-+|+.|++.|.+
T Consensus 19 P~C~~C~~pI~g 30 (45)
T d2dara2 19 PMCAHCNQVIRG 30 (45)
T ss_dssp CBBSSSCCBCCS
T ss_pred eeccccCCcccC
Confidence 368888888763
No 29
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=22.40 E-value=13 Score=20.15 Aligned_cols=23 Identities=17% Similarity=0.647 Sum_probs=16.8
Q ss_pred CCccCccccc----ccccccccCcccc
Q psy11901 68 GSHYCQACAY----KKGICAMCGKKLL 90 (100)
Q Consensus 68 g~~YCq~CAY----kkGiCamCGKki~ 90 (100)
||.||+.|.. .+..|+||=..|+
T Consensus 28 ~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 28 GHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCcccHHHHHHHHHhCCcCCCCCCEeE
Confidence 6778888864 3678888877664
No 30
>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.01 E-value=5.5 Score=21.92 Aligned_cols=21 Identities=29% Similarity=0.866 Sum_probs=15.1
Q ss_pred cchhhhhhhccCCCccCcccccc
Q psy11901 56 SCKICRQKVHQVGSHYCQACAYK 78 (100)
Q Consensus 56 ~C~~CK~~v~q~g~~YCq~CAYk 78 (100)
.|..|...+.| | -.|+.|.|.
T Consensus 16 tC~~C~~~l~q-g-~~C~~C~~~ 36 (49)
T d1kbea_ 16 VCNVCQKSMIF-G-VKCKHCRLK 36 (49)
T ss_dssp CCSSSCCSSCC-E-EEETTTTEE
T ss_pred CchhhchhhhC-c-CCcCCCCCh
Confidence 48888888876 3 667777653
No 31
>d1u5sb1 g.39.1.3 (B:72-102) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.35 E-value=11 Score=19.56 Aligned_cols=12 Identities=25% Similarity=0.733 Sum_probs=9.8
Q ss_pred ccccccCccccc
Q psy11901 80 GICAMCGKKLLD 91 (100)
Q Consensus 80 GiCamCGKki~d 91 (100)
.+|+-|.++|+|
T Consensus 6 p~C~~C~~PI~~ 17 (31)
T d1u5sb1 6 PICGACRRPIEG 17 (31)
T ss_dssp CEETTTTEECCS
T ss_pred cchhhcCCchhh
Confidence 478899999886
No 32
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.30 E-value=13 Score=20.64 Aligned_cols=37 Identities=27% Similarity=0.749 Sum_probs=24.5
Q ss_pred ccchhhhhhh----------ccCCCccCcccccc-----cccccccCccccc
Q psy11901 55 ESCKICRQKV----------HQVGSHYCQACAYK-----KGICAMCGKKLLD 91 (100)
Q Consensus 55 ~~C~~CK~~v----------~q~g~~YCq~CAYk-----kGiCamCGKki~d 91 (100)
..|.||...+ ..=||.||..|..+ ...|++|-+.|..
T Consensus 4 ~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~ 55 (65)
T d1g25a_ 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccc
Confidence 3677776432 12478889998742 3479999988753
No 33
>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}
Probab=20.54 E-value=11 Score=21.55 Aligned_cols=11 Identities=64% Similarity=1.195 Sum_probs=7.4
Q ss_pred ccccccccccC
Q psy11901 76 AYKKGICAMCG 86 (100)
Q Consensus 76 AYkkGiCamCG 86 (100)
||+|-+|..||
T Consensus 1 a~kky~C~~Cg 11 (56)
T d1s24a_ 1 AYLKWICITCG 11 (56)
T ss_dssp CCCEEEETTTT
T ss_pred CCccEECCCCC
Confidence 56666777776
No 34
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.45 E-value=9.7 Score=22.99 Aligned_cols=36 Identities=6% Similarity=-0.130 Sum_probs=26.3
Q ss_pred ccchhhhhhhcc-----CCC-ccCcccccc----cccccccCcccc
Q psy11901 55 ESCKICRQKVHQ-----VGS-HYCQACAYK----KGICAMCGKKLL 90 (100)
Q Consensus 55 ~~C~~CK~~v~q-----~g~-~YCq~CAYk----kGiCamCGKki~ 90 (100)
-.|.||..-+.. .|+ .||..|-.+ .+.|..|+..|.
T Consensus 23 f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~ 68 (98)
T d1wgma_ 23 FLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLT 68 (98)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCC
T ss_pred hCCcCchhHHHHHHhcccccchhhHHHHHHHHHhcCCccccccccc
Confidence 388888874322 255 599988755 689999999875
No 35
>d2cu8a1 g.39.1.3 (A:8-37) Cysteine-rich (intestinal) protein, CRP, CRIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.34 E-value=16 Score=18.82 Aligned_cols=11 Identities=27% Similarity=0.769 Sum_probs=8.5
Q ss_pred ccccccCcccc
Q psy11901 80 GICAMCGKKLL 90 (100)
Q Consensus 80 GiCamCGKki~ 90 (100)
..|+.|||.+-
T Consensus 3 ~~CprC~K~VY 13 (30)
T d2cu8a1 3 SKCPKCDKTVY 13 (30)
T ss_dssp CBCTTTCCBCC
T ss_pred CcCCCCCCcee
Confidence 36899998874
Done!