Query psy11911
Match_columns 279
No_of_seqs 46 out of 48
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 22:06:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11911.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11911hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3edv_A Spectrin beta chain, br 99.5 6.9E-12 2.4E-16 111.8 27.3 253 2-258 46-316 (323)
2 1u4q_A Spectrin alpha chain, b 99.5 5.8E-12 2E-16 111.8 25.6 259 1-263 42-317 (322)
3 3kbt_A Beta-I spectrin, spectr 99.4 5.8E-11 2E-15 105.7 23.5 265 1-269 43-325 (326)
4 1u4q_A Spectrin alpha chain, b 99.3 7.9E-11 2.7E-15 104.4 17.0 212 62-276 2-224 (322)
5 1hci_A Alpha-actinin 2; triple 99.3 8.7E-10 3E-14 103.2 23.7 257 2-263 172-468 (476)
6 1u5p_A Spectrin alpha chain, b 99.3 3.3E-10 1.1E-14 95.7 18.8 201 62-265 2-213 (216)
7 1cun_A Protein (alpha spectrin 99.2 9.6E-10 3.3E-14 92.2 19.2 194 67-263 4-208 (213)
8 1s35_A Beta-I spectrin, spectr 99.2 1.1E-09 3.7E-14 92.4 18.4 196 67-264 4-210 (214)
9 3fb2_A Spectrin alpha chain, b 99.2 3.3E-09 1.1E-13 90.7 18.6 192 64-257 14-215 (218)
10 1hci_A Alpha-actinin 2; triple 99.1 5E-10 1.7E-14 104.9 13.6 222 45-269 116-361 (476)
11 3kbt_A Beta-I spectrin, spectr 99.1 3.9E-09 1.3E-13 93.9 17.0 207 67-276 8-226 (326)
12 3edv_A Spectrin beta chain, br 99.0 2.2E-08 7.6E-13 89.1 17.1 211 65-277 8-229 (323)
13 1quu_A Human skeletal muscle a 98.9 1.8E-08 6.2E-13 88.0 14.0 209 52-263 6-238 (250)
14 3edu_A Beta-I spectrin, spectr 98.8 2.5E-07 8.7E-12 78.9 18.1 200 67-269 5-216 (218)
15 1sjj_A Actinin; 3-helix bundle 98.8 4.9E-08 1.7E-12 98.5 14.8 232 34-268 341-599 (863)
16 1sjj_A Actinin; 3-helix bundle 98.8 2.6E-06 8.8E-11 86.0 25.3 227 2-228 411-676 (863)
17 2iak_A Bullous pemphigoid anti 98.7 5.4E-07 1.8E-11 77.9 15.4 184 72-262 29-221 (224)
18 3pdy_A Plectin; cytoskeleton, 98.4 1.7E-05 5.9E-10 68.2 17.5 183 70-259 12-203 (210)
19 1u5p_A Spectrin alpha chain, b 98.4 1.3E-05 4.3E-10 67.5 15.2 163 1-165 42-214 (216)
20 3lbx_A Spectrin alpha chain, e 98.3 1.3E-05 4.4E-10 66.9 13.4 144 112-259 4-153 (161)
21 1cun_A Protein (alpha spectrin 98.2 3.9E-05 1.3E-09 64.1 14.4 162 1-164 39-210 (213)
22 3uun_A Dystrophin; triple heli 98.1 1.3E-05 4.5E-10 61.2 8.9 107 66-172 5-118 (119)
23 1s35_A Beta-I spectrin, spectr 98.1 0.00013 4.5E-09 61.1 15.8 160 1-163 39-210 (214)
24 3lbx_B Beta-I spectrin, spectr 98.1 3.8E-05 1.3E-09 64.4 12.1 135 62-199 3-142 (185)
25 3uul_A Utrophin; spectrin repe 98.0 5.4E-05 1.9E-09 58.0 10.7 104 66-169 5-115 (118)
26 3f31_A Spectrin alpha chain, b 97.9 0.00021 7.2E-09 58.5 12.6 124 133-258 13-142 (149)
27 3pe0_A Plectin; cytoskeleton, 97.7 0.00036 1.2E-08 63.5 12.4 156 55-213 1-170 (283)
28 3f31_A Spectrin alpha chain, b 97.7 0.00033 1.1E-08 57.3 10.9 124 38-162 22-147 (149)
29 3r6n_A Desmoplakin; spectrin r 97.7 0.0024 8.1E-08 62.2 18.6 179 2-192 42-224 (450)
30 3uul_A Utrophin; spectrin repe 97.7 0.00015 5.2E-09 55.4 7.9 98 169-266 4-111 (118)
31 3edu_A Beta-I spectrin, spectr 97.7 0.00045 1.6E-08 58.7 11.5 162 2-167 41-215 (218)
32 3lbx_A Spectrin alpha chain, e 97.6 0.00042 1.4E-08 57.7 10.9 128 35-163 29-158 (161)
33 1quu_A Human skeletal muscle a 97.6 0.0031 1.1E-07 54.7 16.6 166 2-167 55-243 (250)
34 3uun_A Dystrophin; triple heli 97.6 0.00019 6.5E-09 54.7 7.5 99 169-267 4-112 (119)
35 3fb2_A Spectrin alpha chain, b 97.5 0.00017 5.7E-09 61.4 7.1 108 169-277 15-129 (218)
36 3r6n_A Desmoplakin; spectrin r 97.5 0.0053 1.8E-07 59.7 18.0 193 70-277 9-209 (450)
37 3pdy_A Plectin; cytoskeleton, 97.2 0.0084 2.9E-07 51.3 13.5 150 1-154 44-199 (210)
38 2iak_A Bullous pemphigoid anti 97.1 0.0013 4.6E-08 56.5 7.7 152 2-158 60-218 (224)
39 3lbx_B Beta-I spectrin, spectr 96.9 0.0023 7.9E-08 53.4 7.0 109 168-277 5-120 (185)
40 2spc_A Spectrin; cytoskeleton; 94.8 0.1 3.4E-06 39.5 7.3 91 168-259 4-101 (107)
41 1g8x_A Myosin II heavy chain f 94.5 6 0.00021 42.1 22.4 137 135-272 847-999 (1010)
42 2odv_A Plectin 1, HD1; plakin 94.3 2.8 9.5E-05 37.3 21.0 196 55-259 3-223 (235)
43 2spc_A Spectrin; cytoskeleton; 93.3 0.087 3E-06 39.9 4.4 97 65-162 5-105 (107)
44 3pe0_A Plectin; cytoskeleton, 88.6 0.85 2.9E-05 41.2 6.6 115 161-277 3-124 (283)
45 1g8x_A Myosin II heavy chain f 83.1 3.2 0.00011 44.1 8.6 114 47-163 873-991 (1010)
46 1wlx_A Alpha-actinin 4; three- 83.0 7.2 0.00024 32.2 8.9 92 158-258 3-116 (129)
47 2ycu_A Non muscle myosin 2C, a 62.8 4.4 0.00015 42.9 3.4 127 140-267 844-986 (995)
48 1wlx_A Alpha-actinin 4; three- 55.6 85 0.0029 25.8 11.8 96 66-163 15-122 (129)
49 2odv_A Plectin 1, HD1; plakin 51.8 16 0.00056 32.3 4.7 42 166-207 10-58 (235)
50 2ycu_A Non muscle myosin 2C, a 45.4 8.3 0.00028 40.9 2.0 68 100-167 916-987 (995)
51 2qyw_A Vesicle transport throu 41.0 74 0.0025 24.6 6.5 69 55-128 4-75 (102)
52 1ax8_A Obesity protein, leptin 26.5 51 0.0017 27.9 3.5 82 85-168 41-135 (146)
53 1ykh_B RNA polymerase II holoe 23.5 2.3E+02 0.008 22.8 6.9 62 67-132 54-122 (132)
54 1yke_B RNA polymerase II holoe 23.4 2.3E+02 0.0078 23.5 6.9 62 67-132 54-122 (151)
55 2oez_A UPF0289 protein VP2528; 23.0 3.6E+02 0.012 24.2 8.7 92 151-254 12-105 (247)
56 1fio_A SSO1 protein; four heli 21.3 1.9E+02 0.0066 23.5 6.1 69 97-165 4-75 (196)
57 2dnx_A Syntaxin-12; snare, HAB 20.9 1.4E+02 0.005 23.7 5.1 61 101-165 13-77 (130)
58 3ibp_A Chromosome partition pr 20.5 2.1E+02 0.0071 26.8 6.6 71 84-154 209-290 (302)
59 2ocy_A RAB guanine nucleotide 20.0 3.9E+02 0.013 22.4 10.7 30 55-84 5-34 (154)
No 1
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.54 E-value=6.9e-12 Score=111.81 Aligned_cols=253 Identities=13% Similarity=0.153 Sum_probs=197.5
Q ss_pred hhhhHhhhcchh-HHHHHHH-------HhhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHH
Q psy11911 2 QKYRTFFMNLSH-CRSLLES-------LESHLDPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLH 73 (279)
Q Consensus 2 qKhk~FF~~L~h-~~~iLEs-------l~~kld~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~ 73 (279)
.||+.|=..+.. ...-+++ |-..-.|. .+.-.+.-.++..+=..+.+.+..|...|+.++ ....|..++.
T Consensus 46 ~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~-~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~f~~~~~ 123 (323)
T 3edv_A 46 ERFREFARDTGNIGQERVDTVNHLADELINSGHSD-AATIAEWKDGLNEAWADLLELIDTRTQILAASY-ELHKFYHDAK 123 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 578888777764 2222222 22211222 223333345666777888889999999999988 6788999999
Q ss_pred HHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhccc---CCCchHHhhHHHHHHHh
Q psy11911 74 EEAAWLNIVQQRVPNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLID---CPHLEPATESHRFEILN 150 (279)
Q Consensus 74 ~~~~wLe~~e~~iP~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~---cp~LE~q~~~l~e~wl~ 150 (279)
++..||...+..+|+----.-..+...+.-|+.+..+|..|++++.++.+.|.+|...-. .|.+..++..+...|-.
T Consensus 124 e~~~Wl~~k~~~l~~~~~~d~~~v~~l~~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~ 203 (323)
T 3edv_A 124 EIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKS 203 (323)
T ss_dssp HHHHHHHHHHHTCCCCCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999888863111124456688889999999999999999999999999987531 23477789999999999
Q ss_pred hhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhHH
Q psy11911 151 LERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDNF 223 (279)
Q Consensus 151 l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~~ 223 (279)
+...+...-.+|+.... +.+|....+++..||..+...|....+| ..|..+=+|++|++.+..--..+...+
T Consensus 204 l~~~~~~r~~~L~~~~~-~~~F~~~~~~l~~Wl~~~~~~l~~~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g 282 (323)
T 3edv_A 204 LLDACESRRVRLVDTGD-KFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELG 282 (323)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999885 7899999999999999999999976555 568889999999999887777666666
Q ss_pred HhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhh
Q psy11911 224 ENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTE 258 (279)
Q Consensus 224 ~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~ 258 (279)
.+++.- .-.+....+..+..+.++|..|......
T Consensus 283 ~~Ll~~-~~~~~~~i~~~l~~L~~~w~~l~~~w~~ 316 (323)
T 3edv_A 283 KSLLAR-KHYASEEIKEKLLQLTEKRKEMIDKWED 316 (323)
T ss_dssp HHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhC-CCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665563 3357788999999999999999887654
No 2
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.53 E-value=5.8e-12 Score=111.75 Aligned_cols=259 Identities=10% Similarity=0.149 Sum_probs=199.0
Q ss_pred ChhhhHhhhcchhHHHHHHHHhhcC------ChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHH
Q psy11911 1 MQKYRTFFMNLSHCRSLLESLESHL------DPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHE 74 (279)
Q Consensus 1 mqKhk~FF~~L~h~~~iLEsl~~kl------d~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~ 74 (279)
++||+.|=..+..+..-++.+.... .++..+.-.+--..+..+=..+.+.+..|...|+.++. +..|..++.+
T Consensus 42 l~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~~f~~~~~~ 120 (322)
T 1u4q_A 42 LKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDD 120 (322)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 3577776666665544444443311 12211222223355666677788889999999999988 6779999999
Q ss_pred HHHHHHHHHhcC--CCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHHHh
Q psy11911 75 EAAWLNIVQQRV--PNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEILN 150 (279)
Q Consensus 75 ~~~wLe~~e~~i--P~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~wl~ 150 (279)
+..|+...+..+ |++|. +-......+.-++.+...|..|.+++..+.+.|+.|... ..++.+...+..+..+|-.
T Consensus 121 ~~~Wl~e~e~~~~~~~~g~-dl~~v~~ll~~h~~l~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~l~~L~~~w~~ 199 (322)
T 1u4q_A 121 EESWIKEKKLLVSSEDYGR-DLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKE 199 (322)
T ss_dssp HHHHHHHHHHHHTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 999999876543 33432 355677889999999999999999999999999999764 4466788999999999999
Q ss_pred hhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhHH
Q psy11911 151 LERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDNF 223 (279)
Q Consensus 151 l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~~ 223 (279)
+.+.+...-.+|+..+. |..|..+++++..||..+...|.+-.+| .-+..+-.|..+++.+.+--......+
T Consensus 200 L~~~~~~R~~~L~~~~~-~~qf~~~~~~~~~Wl~~~e~~l~~~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~ 278 (322)
T 1u4q_A 200 LKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANG 278 (322)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998887 8999999999999999999998764444 568888999999998776555666666
Q ss_pred HhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCC
Q psy11911 224 ENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSF 263 (279)
Q Consensus 224 ~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~ 263 (279)
...+.--+ .|...++..+..+..+|..|......-+..|
T Consensus 279 ~~L~~~~~-~~~~~i~~~~~~l~~rw~~l~~~~~~R~~~L 317 (322)
T 1u4q_A 279 EDLIKKNN-HHVENITAKMKGLKGKVSDLEKAAAQRKAKL 317 (322)
T ss_dssp HHHHHTTC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555323 4778899999999999999998876554433
No 3
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.42 E-value=5.8e-11 Score=105.73 Aligned_cols=265 Identities=8% Similarity=0.123 Sum_probs=184.2
Q ss_pred ChhhhHhhhcchhHHHHHHHHhhcCChh------hhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHH
Q psy11911 1 MQKYRTFFMNLSHCRSLLESLESHLDPA------TRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHE 74 (279)
Q Consensus 1 mqKhk~FF~~L~h~~~iLEsl~~kld~~------t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~ 74 (279)
++||+.|=..+..+..-++.+....... ..+.-...-..+..+=..+.+.+..|+..|+.++ .+-.|..++.+
T Consensus 43 l~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~L~~~~~~R~~~Le~~l-~l~~f~~~~~~ 121 (326)
T 3kbt_A 43 LKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMY-HLFQLKRETDD 121 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3688888888877666666554311111 1122233345666777889999999999999998 67899999999
Q ss_pred HHHHHHHHHhcC--CCCcccchhhHHHHHHHHHHHHHhhhh-hhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHHH
Q psy11911 75 EAAWLNIVQQRV--PNLSAMTCSDYKQYESLFKALDEDMKV-HLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEIL 149 (279)
Q Consensus 75 ~~~wLe~~e~~i--P~v~lVteerl~erIslYQ~l~~~l~~-hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~wl 149 (279)
+..|+...+..+ |++|. +-+.+..-+.-|+.+..++.. |++++..+...|..|... -.+|.+...+..+..+|-
T Consensus 122 l~~Wl~~~e~~l~~~~~g~-d~~~v~~l~~~~~~f~~el~~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~ 200 (326)
T 3kbt_A 122 LEQWISEKELVASSPEMGQ-DFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWA 200 (326)
T ss_dssp HHHHHHHHHHHHHCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccCCC-CHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 999998877643 44443 356677888999999999998 899999999999999876 346678899999999999
Q ss_pred hhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhH
Q psy11911 150 NLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDN 222 (279)
Q Consensus 150 ~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~ 222 (279)
.+...+...-.+|...+ .+.+|..+++++..|+......|.. .++ ..++.+=.|..++..+.+--......
T Consensus 201 ~l~~~~~~r~~~L~~a~-~~~~f~~~~~e~~~Wl~ek~~~L~~-~~~~d~~~~~~ll~~~~~~e~~l~~~~~~v~~l~~~ 278 (326)
T 3kbt_A 201 DLLELIDTRMQLLAASY-DLHRYFYTGAEILGLIDEKHRELPE-DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDV 278 (326)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC----------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCcc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887 5778999999999999999988842 111 55677777888888776555555555
Q ss_pred HHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCcccccc
Q psy11911 223 FENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDGNVDF 269 (279)
Q Consensus 223 ~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~~~~~ 269 (279)
..+++..-|-.+...+++.+..+.++|..|...+..=...|....+|
T Consensus 279 a~~L~~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~ 325 (326)
T 3kbt_A 279 ATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 325 (326)
T ss_dssp HHHHHHHCCTHHHHHHHHHHHHHHHHHHHHC----------------
T ss_pred HHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55444544533568899999999999999999888777766655543
No 4
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.31 E-value=7.9e-11 Score=104.43 Aligned_cols=212 Identities=16% Similarity=0.200 Sum_probs=177.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCC--CcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCc
Q psy11911 62 ASKWISLDQNLHEEAAWLNIVQQRVPN--LSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHL 137 (279)
Q Consensus 62 ls~W~~Ld~~~~~~~~wLe~~e~~iP~--v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~L 137 (279)
|.+...|...+.++..|+..++..+.+ +|. +-......+.-++.+..+|..|++++-++...|..|... ..++.+
T Consensus 2 a~~~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~-dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i 80 (322)
T 1u4q_A 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGK-DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQV 80 (322)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS-SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCccCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHH
Confidence 457788999999999999999998854 332 355667888999999999999999999999999999864 345667
Q ss_pred hHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhh
Q psy11911 138 EPATESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIE 210 (279)
Q Consensus 138 E~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve 210 (279)
...++.+..+|-+|.+.+...-.+|+..+. +..|..+.+++..||..+...+.+-.++ .-+..+=.|.++++
T Consensus 81 ~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~~el~ 159 (322)
T 1u4q_A 81 KDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELA 159 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999988887 7789999999999999999888764433 55677888999999
Q ss_pred hhhhhhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCccccccchhhhcc
Q psy11911 211 FYNTLLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDGNVDFTQFEYEL 276 (279)
Q Consensus 211 ~ksslk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~~~~~~~~~~~~ 276 (279)
.+.+.-..+...+.+.+.--+ .+....+..+..|.++|..|......-+..|.....+-+|....
T Consensus 160 ~~~~~i~~l~~~g~~L~~~~~-~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~qf~~~~ 224 (322)
T 1u4q_A 160 AHEPAIQGVLDTGKKLSDDNT-IGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANV 224 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988777777777776666333 47888999999999999999999999999998888877776544
No 5
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.29 E-value=8.7e-10 Score=103.23 Aligned_cols=257 Identities=8% Similarity=0.123 Sum_probs=191.0
Q ss_pred hhhhHhhhcchhHHHHHHHHhhcCChhhh------hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHH-------HH
Q psy11911 2 QKYRTFFMNLSHCRSLLESLESHLDPATR------NKFSELHKQLHQQACDILDKAAIRSQQMALAASKWI-------SL 68 (279)
Q Consensus 2 qKhk~FF~~L~h~~~iLEsl~~kld~~t~------~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~-------~L 68 (279)
.||+.|=..+..+..-++++......... ..-.+-..++..+=..+.+.+..|...|+.++..+. .|
T Consensus 172 ~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f 251 (476)
T 1hci_A 172 RKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEF 251 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57777766666555444444322111111 111222456777778889999999999999998887 66
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHH---Hhhhhhhhhcc------cCCCch
Q psy11911 69 DQNLHEEAAWLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQL---VSVCRSITNLI------DCPHLE 138 (279)
Q Consensus 69 d~~~~~~~~wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~---l~~gk~L~~~V------~cp~LE 138 (279)
..+..++..||+..+..+.+.... +.+.....+.-++.++.+|..+.+.+..+ ...|..|...- .+|.+.
T Consensus 252 ~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~ 331 (476)
T 1hci_A 252 AKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYST 331 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCS
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchh
Confidence 678888999999998888776644 35667788999999999999999887666 56777776653 578899
Q ss_pred HHhhHHHHHHHhhhHHHhhHhHhHHHHHHH-------HHHHHhhHhHHHHHHHHHHhhhcc--ccCc----cchhHHHHH
Q psy11911 139 PATESHRFEILNLERSISSGLIKLSTFTEY-------WLEYQTLADRLESWMDAHQNQIES--LNKS----NNMKSYWEL 205 (279)
Q Consensus 139 ~q~~~l~e~wl~l~~kV~~eL~RL~~~lkh-------W~~Y~~~s~~L~~WL~sA~~~L~~--l~vp----d~l~~F~Ef 205 (279)
..+..+..+|-++.+.+...-.+|+..+.. |..|..+++++..||..+...|.+ +..| +.+..|=.|
T Consensus 332 ~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~~~~~~~~~le~~l~~~~~~ 411 (476)
T 1hci_A 332 VTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQY 411 (476)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTTSTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999886 479999999999999999999985 3324 668889999
Q ss_pred HHHhhhhhhhhh---hhhhHHHhhhcc-cCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCC
Q psy11911 206 KAQIEFYNTLLD---RSRDNFENAMRV-FPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSF 263 (279)
Q Consensus 206 skeve~ksslk~---s~~~~~~qaL~~-~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~ 263 (279)
.++++.+.+.-. ..+..+..++.. -|..+ .....+..+|..|.+.+..-+..|
T Consensus 412 ~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~-----~~~~~l~~~W~~L~~~~~~~~~~l 468 (476)
T 1hci_A 412 EHNIINYKNNIDKLEGDHQLIQEALVFDNKHTN-----YTMEHIRVGWELLLTTIARTINEV 468 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCS-----CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcccCCCcch-----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999996664443 334445444421 23333 455679999999999887765544
No 6
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.29 E-value=3.3e-10 Score=95.71 Aligned_cols=201 Identities=15% Similarity=0.167 Sum_probs=165.8
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCC--CcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhccc--CCCc
Q psy11911 62 ASKWISLDQNLHEEAAWLNIVQQRVPN--LSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLID--CPHL 137 (279)
Q Consensus 62 ls~W~~Ld~~~~~~~~wLe~~e~~iP~--v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~--cp~L 137 (279)
|.++..|..++.++..||+.++..+-+ +|. .-......+.-++.+..+|..|++++..+...|..|...-. +|.+
T Consensus 2 a~~~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~-dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i 80 (216)
T 1u5p_A 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGK-DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQV 80 (216)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCcccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 567889999999999999999887644 332 34555677888999999999999999999999999986533 4667
Q ss_pred hHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhh
Q psy11911 138 EPATESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIE 210 (279)
Q Consensus 138 E~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve 210 (279)
...+..+..+|-+|.+.....-.+|+..+. .-.|..+.+++..||..+...+.+-.++ .-+..+=.|.++++
T Consensus 81 ~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~qf~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~kh~~~~~el~ 159 (216)
T 1u5p_A 81 KDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELA 159 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999988776 5679999999999999999877764444 56778888999999
Q ss_pred hhhhhhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCcc
Q psy11911 211 FYNTLLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDG 265 (279)
Q Consensus 211 ~ksslk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~ 265 (279)
.+.+.-.++...+.+.+.--+ .+....++.+..+.++|..|.+....-+..|..
T Consensus 160 ~~~~~i~~l~~~g~~L~~~~~-~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~ 213 (216)
T 1u5p_A 160 AHEPAIQGVLDTGKKLSDDNT-IGKEEIQQRLAQFVDHWKELKQLAAARGQRLEE 213 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHTCS-SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HhHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998877777777776666333 467789999999999999999988877666544
No 7
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.24 E-value=9.6e-10 Score=92.21 Aligned_cols=194 Identities=10% Similarity=0.157 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCC--CCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhh
Q psy11911 67 SLDQNLHEEAAWLNIVQQRVP--NLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATE 142 (279)
Q Consensus 67 ~Ld~~~~~~~~wLe~~e~~iP--~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~ 142 (279)
.|..++.++..||...+..+- ++|. +-......+.-++.+...|..|.+++.++...|+.|... ..+|.+...+.
T Consensus 4 qf~~~~~~~~~Wl~e~e~~l~~~~~g~-dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~~ 82 (213)
T 1cun_A 4 QFFRDMDDEESWIKEKKLLVSSEDYGR-DLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLA 82 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHhcCcccCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 578899999999998876553 3332 345566788999999999999999999999999999876 33456788999
Q ss_pred HHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhh
Q psy11911 143 SHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTL 215 (279)
Q Consensus 143 ~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~kssl 215 (279)
.+...|-.|.+.....-.+|+..++. ..|..+++++..||..+...+.+-.++ .-+..+-.|.++++.+..-
T Consensus 83 ~l~~~w~~L~~~~~~R~~~Le~~~~~-~~f~~~~~e~~~Wl~~~e~~l~~~~~g~~~~~v~~ll~~h~~~~~el~~~~~~ 161 (213)
T 1cun_A 83 QFVDHWKELKQLAAARGQRLEESLEY-QQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDR 161 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999875 799999999999999999888764333 5677888999999988866
Q ss_pred hhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCC
Q psy11911 216 LDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSF 263 (279)
Q Consensus 216 k~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~ 263 (279)
-.+....+.+.+.--+ .|....++.+..+.++|..|.+....-+..|
T Consensus 162 i~~l~~~~~~L~~~~~-~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L 208 (213)
T 1cun_A 162 VNDVCANGEDLIKKNN-HHVENITAKMKGLKGKVSDLEKAAAQRKAKL 208 (213)
T ss_dssp HHHHHHHHHHHHHHCC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777776666444 4788899999999999999999887665544
No 8
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.22 E-value=1.1e-09 Score=92.41 Aligned_cols=196 Identities=14% Similarity=0.108 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc---cCCCchHHhh
Q psy11911 67 SLDQNLHEEAAWLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI---DCPHLEPATE 142 (279)
Q Consensus 67 ~Ld~~~~~~~~wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V---~cp~LE~q~~ 142 (279)
.|..++.++..|++-.+..+-+-..- ........+.-.+.++..|..|.+++..+...|+.|+..- .+|.+...++
T Consensus 4 ~F~~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l~ 83 (214)
T 1s35_A 4 AFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLE 83 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence 46778999999999887765432221 2344567778899999999999999999999999999864 3458899999
Q ss_pred HHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhh
Q psy11911 143 SHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTL 215 (279)
Q Consensus 143 ~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~kssl 215 (279)
.+.+.|-.+.+.....=.+|+.-+. |..|.++++++..||..++..|.+-.+| .-+..+-.|.++++.+..-
T Consensus 84 ~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~l~~~~~~ 162 (214)
T 1s35_A 84 GLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDK 162 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999998886 9999999999999999999999875555 5567788888888877655
Q ss_pred hhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCc
Q psy11911 216 LDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFD 264 (279)
Q Consensus 216 k~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~ 264 (279)
-.+....+.+++.--+ -|....+..+..|.++|..|....+.-...|.
T Consensus 163 i~~l~~~a~~L~~~~h-~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~ 210 (214)
T 1s35_A 163 VLSPVDSGNKLVAEGN-LYSDKIKEKVQLIEDRHRKNNEKAQEASVLLR 210 (214)
T ss_dssp HHHHHHHHHHHHHTTC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555566665555322 36777899999999999999998877655443
No 9
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.15 E-value=3.3e-09 Score=90.67 Aligned_cols=192 Identities=10% Similarity=0.132 Sum_probs=146.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc--cCCCchHH
Q psy11911 64 KWISLDQNLHEEAAWLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI--DCPHLEPA 140 (279)
Q Consensus 64 ~W~~Ld~~~~~~~~wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V--~cp~LE~q 140 (279)
++..|..+++++..||+.++..+-+-... .-......+.-.+.++..|+.|.+++-.+...|+.|+..- .+|.++..
T Consensus 14 ~~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i~~~ 93 (218)
T 3fb2_A 14 DLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQK 93 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 46789999999999999999887443222 2344556778899999999999999999999999998763 46789999
Q ss_pred hhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhh
Q psy11911 141 TESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYN 213 (279)
Q Consensus 141 ~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ks 213 (279)
+..+.+.|-.+.+....--.+|+..+. +..|.++++++..||...+..|.+-.+| .-++.+=.|.++++.+.
T Consensus 94 l~~L~~~w~~L~~~~~~R~~~L~q~l~-l~~F~~d~~~~~~WL~~~e~~L~~~~~g~s~~~ve~ll~~h~~f~~~l~~~~ 172 (218)
T 3fb2_A 94 LDILDQERADLEKAWVQRRMMLDQCLE-LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQE 172 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999999999999998885 6899999999999999999988875444 55677778888888765
Q ss_pred hhhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhh
Q psy11911 214 TLLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVT 257 (279)
Q Consensus 214 slk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip 257 (279)
.-=......+++++.- .-.|....+..+..|..+|..|...+.
T Consensus 173 ~~v~~l~~~~~~L~~~-~h~~~~~I~~~~~~l~~rW~~l~~~l~ 215 (218)
T 3fb2_A 173 EKIAALQAFADQLIAA-GHYAKGDISSRRNEVLDRWRRLKAQMI 215 (218)
T ss_dssp HHHHHHHHHHHHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444445555552 334778899999999999999988764
No 10
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.13 E-value=5e-10 Score=104.87 Aligned_cols=222 Identities=12% Similarity=0.179 Sum_probs=173.9
Q ss_pred HHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCcc-c-chhhHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy11911 45 CDILDKAAIRSQQMALAASKWISLDQNLHEEAAWLNIVQQRVPNLSA-M-TCSDYKQYESLFKALDEDMKVHLVRTTQLV 122 (279)
Q Consensus 45 ~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~~iP~v~l-V-teerl~erIslYQ~l~~~l~~hq~kL~Q~l 122 (279)
...+..|..|...|+.+ +..|..++.++..||...+..+.+-.. . +-+.....+.-++.+..+|..|++++-++.
T Consensus 116 ~~~l~~~~~R~~~Le~~---~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~~~~l~~~~~~v~~l~ 192 (476)
T 1hci_A 116 EEWLLNEIRRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIA 192 (476)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 34567778888888877 678999999999999988887744333 1 355677888889999999999999999999
Q ss_pred hhhhhhhhc--ccCCCchHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHH-------HHHhhHhHHHHHHHHHHhhhccc
Q psy11911 123 SVCRSITNL--IDCPHLEPATESHRFEILNLERSISSGLIKLSTFTEYWL-------EYQTLADRLESWMDAHQNQIESL 193 (279)
Q Consensus 123 ~~gk~L~~~--V~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~-------~Y~~~s~~L~~WL~sA~~~L~~l 193 (279)
..|..|... -.++.+..++..+..+|-.+.+.+...-.+|+..++.+. .|...++++..||..+...|...
T Consensus 193 ~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~ 272 (476)
T 1hci_A 193 AIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDM 272 (476)
T ss_dssp HHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999875 233457778999999999999999998899998888876 89999999999999999999875
Q ss_pred cCc-------cchhHHHHHHHHhhhhhhhhhhh---hhHHHhhhcccCc---chHHHHHHHHHhHHHHHHHHHhhhhhhc
Q psy11911 194 NKS-------NNMKSYWELKAQIEFYNTLLDRS---RDNFENAMRVFPV---SDEVLQRQLYGQLEDRWNKLVSCVTEQN 260 (279)
Q Consensus 194 ~vp-------d~l~~F~Efskeve~ksslk~s~---~~~~~qaL~~~~i---~De~~~R~~l~q~e~~W~~l~~~ip~iQ 260 (279)
..+ .-+..+=.|.++++.+.+-..++ +..+.+.+.-.+. .+....+..+..+..+|..|.+.+..-+
T Consensus 273 ~~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~ 352 (476)
T 1hci_A 273 FIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRD 352 (476)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHH
Confidence 433 55667778888888666544443 3444443333332 1444557788999999999999999888
Q ss_pred cCCcccccc
Q psy11911 261 PSFDGNVDF 269 (279)
Q Consensus 261 e~~~~~~~~ 269 (279)
..+......
T Consensus 353 ~~L~~~l~~ 361 (476)
T 1hci_A 353 QSLQEELAR 361 (476)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877763
No 11
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.09 E-value=3.9e-09 Score=93.89 Aligned_cols=207 Identities=11% Similarity=0.095 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCC--CCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhh
Q psy11911 67 SLDQNLHEEAAWLNIVQQRVP--NLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATE 142 (279)
Q Consensus 67 ~Ld~~~~~~~~wLe~~e~~iP--~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~ 142 (279)
.|..++.++..||...+..+= ++| -........+.-++.+..+|..|++.+-++...|..|... -.+|.+...++
T Consensus 8 qf~~~~~el~~Wl~e~~~~l~~~~~g-~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~ 86 (326)
T 3kbt_A 8 QYYLDADEAEAWIGEQELYVISDEIP-KDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRLQG 86 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCCCC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Confidence 477888999999998876653 333 1355667889999999999999999999999999999875 23457788899
Q ss_pred HHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhh-hhh
Q psy11911 143 SHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEF-YNT 214 (279)
Q Consensus 143 ~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~-kss 214 (279)
.+.++|-.|......--.+|+..+ .+..|.++++++..||..++..+.+-.+| .-+..|=.|.+++.. +.+
T Consensus 87 ~l~~~w~~L~~~~~~R~~~Le~~l-~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~d~~~v~~l~~~~~~f~~el~~~~~~ 165 (326)
T 3kbt_A 87 QVDKHYAGLKDVAEERKRKLENMY-HLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQE 165 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccccCCCCHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999999999999887 56799999999999999999988875555 346678888888876 544
Q ss_pred hhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCccccccchhhhcc
Q psy11911 215 LLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDGNVDFTQFEYEL 276 (279)
Q Consensus 215 lk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~~~~~~~~~~~~ 276 (279)
--.++...+.+++.--+ .|....+..+..|..+|..|...+..-+..|.....+-+|..++
T Consensus 166 ~v~~l~~~~~~L~~~~~-~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~f~~~~ 226 (326)
T 3kbt_A 166 RVDNVNAFIERLIDAGH-SEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTG 226 (326)
T ss_dssp HHHHHHHHHHHHHHHCC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555555555444 47888999999999999999999999888888776666665443
No 12
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=98.98 E-value=2.2e-08 Score=89.14 Aligned_cols=211 Identities=8% Similarity=0.080 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhh-hhHHHHHHHhhhhhhhhcc--cCCCchHH
Q psy11911 65 WISLDQNLHEEAAWLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKV-HLVRTTQLVSVCRSITNLI--DCPHLEPA 140 (279)
Q Consensus 65 W~~Ld~~~~~~~~wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~-hq~kL~Q~l~~gk~L~~~V--~cp~LE~q 140 (279)
.-.|..+..++..|+...+..+-+...- +-+.....+.-|+.+..++.. |++++-.+...|..|...- .+|.+...
T Consensus 8 l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~ 87 (323)
T 3edv_A 8 LFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEW 87 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 3478889999999998887655332211 356677888899999999998 8999999999999998753 34567888
Q ss_pred hhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhh
Q psy11911 141 TESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYN 213 (279)
Q Consensus 141 ~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ks 213 (279)
++.+..+|-.+.+.+...-.+|...+ .+.+|..+++++..||......|.. .++ .-++.+=.|..++..+.
T Consensus 88 ~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~f~~~~~e~~~Wl~~k~~~l~~-~~~~d~~~v~~l~~~h~~~~~~l~~~~ 165 (323)
T 3edv_A 88 KDGLNEAWADLLELIDTRTQILAASY-ELHKFYHDAKEIFGRIQDKHKKLPE-ELGRDQNTVETLQRMHTTFEHDIQALG 165 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCC-CCCSSHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccc-ccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999998877 6788999999999999998887742 222 34566777888888887
Q ss_pred hhhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCccccccchhhhccc
Q psy11911 214 TLLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDGNVDFTQFEYELD 277 (279)
Q Consensus 214 slk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~~~~~~~~~~~~~ 277 (279)
.--.+....+.+.+..-|-.+....+..+..+.++|..|......-...|.....+-+|.-.++
T Consensus 166 ~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F~~~~~ 229 (323)
T 3edv_A 166 TQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVR 229 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677777777776675467789999999999999999999999888888877766655443
No 13
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=98.92 E-value=1.8e-08 Score=87.96 Aligned_cols=209 Identities=12% Similarity=0.179 Sum_probs=155.2
Q ss_pred HHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCcc-c-chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhh
Q psy11911 52 AIRSQQMALAASKWISLDQNLHEEAAWLNIVQQRVPNLSA-M-TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSIT 129 (279)
Q Consensus 52 ~~Rg~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~~iP~v~l-V-teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~ 129 (279)
-.|-..|+.+ .-.|..++.++..||...+..+-+-.. + +-+.....+.-.+.+..+|..|++++.++...|+.|.
T Consensus 6 ~~R~~kLe~l---~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~ 82 (250)
T 1quu_A 6 IRRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELN 82 (250)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777 578999999999999887776655444 2 3566778899999999999999999999999999998
Q ss_pred hccc--CCCchHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHH-------HHHhhHhHHHHHHHHHHhhhccccCc----
Q psy11911 130 NLID--CPHLEPATESHRFEILNLERSISSGLIKLSTFTEYWL-------EYQTLADRLESWMDAHQNQIESLNKS---- 196 (279)
Q Consensus 130 ~~V~--cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~-------~Y~~~s~~L~~WL~sA~~~L~~l~vp---- 196 (279)
..=. .+.+..++..+.++|-.|.+.+...-.+|+..++.-. .|..+++++..||..+...|.+-.++
T Consensus 83 ~~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e 162 (250)
T 1quu_A 83 ELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIE 162 (250)
T ss_dssp HTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCCSTT
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccccCCHH
Confidence 7632 2457778999999999999999998899988888775 99999999999999999999874433
Q ss_pred ---cchhHHHHHHHHhhhhhhhhhh---hhhHHHhhhcccCc---chHHHHHHHHHhHHHHHHHHHhhhhhhccCC
Q psy11911 197 ---NNMKSYWELKAQIEFYNTLLDR---SRDNFENAMRVFPV---SDEVLQRQLYGQLEDRWNKLVSCVTEQNPSF 263 (279)
Q Consensus 197 ---d~l~~F~Efskeve~ksslk~s---~~~~~~qaL~~~~i---~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~ 263 (279)
.-+..+-.|.++++....-.++ .+..+.+.+.-.+. .|+......+..|..+|..|.+-++.-+..|
T Consensus 163 ~v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L 238 (250)
T 1quu_A 163 EIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSL 238 (250)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666554433322222 22333332222221 2444456678999999999998887655444
No 14
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=98.84 E-value=2.5e-07 Score=78.94 Aligned_cols=200 Identities=7% Similarity=0.112 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCC--CCcccchhhHHHHHHHHHHHHHhhhh-hhHHHHHHHhhhhhhhhcc--cCCCchHHh
Q psy11911 67 SLDQNLHEEAAWLNIVQQRVP--NLSAMTCSDYKQYESLFKALDEDMKV-HLVRTTQLVSVCRSITNLI--DCPHLEPAT 141 (279)
Q Consensus 67 ~Ld~~~~~~~~wLe~~e~~iP--~v~lVteerl~erIslYQ~l~~~l~~-hq~kL~Q~l~~gk~L~~~V--~cp~LE~q~ 141 (279)
.|..+..++..||..-+..+- ++|. .-+++...+.-|+.+..++.. |++++..+...|..|...- ..|.+...+
T Consensus 5 ~f~~~~~~l~~Wl~~ke~~l~~~~~g~-dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~ 83 (218)
T 3edu_A 5 QLKRETDDLEQWISEKELVASSPEMGQ-DFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWK 83 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccCC-CHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 577788889999987766443 2331 345677888899999999998 9999999999999998852 335677888
Q ss_pred hHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhh
Q psy11911 142 ESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNT 214 (279)
Q Consensus 142 ~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~kss 214 (279)
..+-..|-.+.+.+...-++|.... ...+|..+++++..||......|.. .++ ..++..=.|.+++.++..
T Consensus 84 ~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~F~~~~~e~~~Wl~ek~~~l~~-~~g~dl~~v~~l~~~h~~~e~dL~~~~~ 161 (218)
T 3edu_A 84 DGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGAEILGLIDEKHRELPE-DVGLDASTAESFHRVHTAFERELHLLGV 161 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCC--------------CCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCCC-ccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998876 6789999999999999999888841 111 556677788899998876
Q ss_pred hhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCcccccc
Q psy11911 215 LLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDGNVDF 269 (279)
Q Consensus 215 lk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~~~~~ 269 (279)
--.+......+.+..-|-.+....+..+..|.++|..|....+.-...|....++
T Consensus 162 ~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~ 216 (218)
T 3edu_A 162 QVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 216 (218)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666666666555544533567889999999999999999999888777665543
No 15
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.81 E-value=4.9e-08 Score=98.49 Aligned_cols=232 Identities=13% Similarity=0.149 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHH---HHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCccc--chhhHHHHHHHHHHHH
Q psy11911 34 SELHKQLHQQAC---DILDKAAIRSQQMALAASKWISLDQNLHEEAAWLNIVQQRVPNLSAM--TCSDYKQYESLFKALD 108 (279)
Q Consensus 34 ~~~h~eL~~~A~---~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~~iP~v~lV--teerl~erIslYQ~l~ 108 (279)
.+.|..|..... ..+..+..|...|+..+ ..|..++.++..||...+..+.+.... +-+.....+...+.+.
T Consensus 341 ~~~w~~L~~~~~~r~~~l~~~~~R~~~Le~l~---~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~ 417 (863)
T 1sjj_A 341 NNAWGGLEQAEKGYEEWLLNEIRRLERLDHLA---EKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFE 417 (863)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHEEHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHH
Confidence 334555544332 45556778888888754 789999999999999888776653222 4556667788899999
Q ss_pred HhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHH-------HHHhhHhHH
Q psy11911 109 EDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEILNLERSISSGLIKLSTFTEYWL-------EYQTLADRL 179 (279)
Q Consensus 109 ~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~-------~Y~~~s~~L 179 (279)
.+|..|++++.++...|..|... ..+|.+..++..+.++|-+|.+.+...-.+|+..++.+. .|...++.+
T Consensus 418 ~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~ 497 (863)
T 1sjj_A 418 SDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPF 497 (863)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999754 345678889999999999999999988888888888775 899999999
Q ss_pred HHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhHHHhhhccc------CcchHHHHHHHHHhHH
Q psy11911 180 ESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVF------PVSDEVLQRQLYGQLE 246 (279)
Q Consensus 180 ~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~------~i~De~~~R~~l~q~e 246 (279)
..||..+...|.+..++ .-+..+=.|.++++.+..-.++...-..++.++. .+.|.......+..+.
T Consensus 498 ~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~ 577 (863)
T 1sjj_A 498 NNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEIN 577 (863)
T ss_dssp HHHHHHHHHHHHCCCCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHH
T ss_pred HHHHHHHHHHhcchHhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHH
Confidence 99999999999875444 5566777788888766543333222223222321 1112222233477899
Q ss_pred HHHHHHHhhhhhhccCCccccc
Q psy11911 247 DRWNKLVSCVTEQNPSFDGNVD 268 (279)
Q Consensus 247 ~~W~~l~~~ip~iQe~~~~~~~ 268 (279)
.+|..|.+.+..-+..|.....
T Consensus 578 ~rw~~L~~~~~~R~~~L~~~l~ 599 (863)
T 1sjj_A 578 GKWEHVRQLVPRRDQALMEEHA 599 (863)
T ss_dssp HHHHHHHHHHHHHHHHHGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888877777663
No 16
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.76 E-value=2.6e-06 Score=85.99 Aligned_cols=227 Identities=8% Similarity=0.136 Sum_probs=172.0
Q ss_pred hhhhHhhhcchhHHHHHHHHhhcCChh------hhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHH---
Q psy11911 2 QKYRTFFMNLSHCRSLLESLESHLDPA------TRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNL--- 72 (279)
Q Consensus 2 qKhk~FF~~L~h~~~iLEsl~~kld~~------t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~--- 72 (279)
+||+.|-..+..+..-++++..-.... ..+.-.+-..++..+=..+.+.+..|...|+.++.....+|+-+
T Consensus 411 ~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f 490 (863)
T 1sjj_A 411 KKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEY 490 (863)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888777666555554443211111 11222333566777888899999999999999999998666544
Q ss_pred ----HHHHHHHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc---------cCCCch
Q psy11911 73 ----HEEAAWLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI---------DCPHLE 138 (279)
Q Consensus 73 ----~~~~~wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V---------~cp~LE 138 (279)
.++..|++..+..+.+.... +.+.....+.-.+.+..+|..|.+++.++...|..+.... .+|...
T Consensus 491 ~~~a~~~~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 570 (863)
T 1sjj_A 491 AKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTT 570 (863)
T ss_dssp HHHTTTTHHHHHHHHHHHHCCCCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSS
T ss_pred HHHHHHHHHHHHHHHHHhcchHhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCc
Confidence 45889999988777654443 4666888999999999999999999999988888887742 467888
Q ss_pred HHhhHHHHHHHhhhHHHhhHhHhHHHHH-------HHHHHHHhhHhHHHHHHHHHHhhhccccC--c----cchhHHHHH
Q psy11911 139 PATESHRFEILNLERSISSGLIKLSTFT-------EYWLEYQTLADRLESWMDAHQNQIESLNK--S----NNMKSYWEL 205 (279)
Q Consensus 139 ~q~~~l~e~wl~l~~kV~~eL~RL~~~l-------khW~~Y~~~s~~L~~WL~sA~~~L~~l~v--p----d~l~~F~Ef 205 (279)
..+..+..+|-++.+.+...-.+|+..+ ..|..|..+++++..|+..+...|.+... | +.+..|-+|
T Consensus 571 ~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~F~~~a~~~~~Wi~e~e~~l~~~~~~~~~~le~~l~~~~~~ 650 (863)
T 1sjj_A 571 ITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQY 650 (863)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCTTTSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHH
Confidence 8899999999999999999888888877 67999999999999999999999986433 3 667889999
Q ss_pred HHHhhhhh-hhhh--hhhhHHHhhhc
Q psy11911 206 KAQIEFYN-TLLD--RSRDNFENAMR 228 (279)
Q Consensus 206 skeve~ks-slk~--s~~~~~~qaL~ 228 (279)
.+++..+. .+.. ..+..+.++++
T Consensus 651 ~~el~~~~~~i~~l~~l~~~L~~~~~ 676 (863)
T 1sjj_A 651 EKSIVNYKPKIDQLEGDHQQIQEALI 676 (863)
T ss_dssp HHHHHTTGGGHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 99988665 4433 34555555554
No 17
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=98.69 E-value=5.4e-07 Score=77.87 Aligned_cols=184 Identities=8% Similarity=0.045 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHhcCC--CCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcccCCCchHHhhHHHHHHH
Q psy11911 72 LHEEAAWLNIVQQRVP--NLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLIDCPHLEPATESHRFEIL 149 (279)
Q Consensus 72 ~~~~~~wLe~~e~~iP--~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~cp~LE~q~~~l~e~wl 149 (279)
+.++..|++..+..+- +.|. .-.....-|.-.+.+..+|..|.+++-++...+..+.. ...|.+...+..+.++|-
T Consensus 29 ~~~l~~Wl~e~e~~l~s~d~g~-Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~-~~~~~i~~~~~~l~~~~~ 106 (224)
T 2iak_A 29 VQDLLNWVDEMQVQLDRTEWGS-DLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTA-PLKLSYTDKLHRLESQYA 106 (224)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCS-SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCT-THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHHH
Confidence 6677778877776653 3332 34556678888999999999999999999877777654 335778889999999999
Q ss_pred hhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhH
Q psy11911 150 NLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDN 222 (279)
Q Consensus 150 ~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~ 222 (279)
.|.+.......+|+ ..-.|.+++++...||......+.+-..+ .=+..|=.|.++++.|.+--++++..
T Consensus 107 ~L~~~~~~R~~~Le----~l~~F~~~~~~~~~Wi~eke~~~~s~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~ 182 (224)
T 2iak_A 107 KLLNTSRNQERHLD----TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEI 182 (224)
T ss_dssp HTTTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCC---------------CSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999998 67799999999999999999988763333 33467888999999999888888888
Q ss_pred HHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccC
Q psy11911 223 FENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPS 262 (279)
Q Consensus 223 ~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~ 262 (279)
+.+++. ..-.|....+..+..|.++|..|....+.....
T Consensus 183 g~~L~~-~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~ 221 (224)
T 2iak_A 183 AEQLLL-ENHPARLTIEAYRAAMQTQWSWILQLCQCVEQH 221 (224)
T ss_dssp HHHHHH-TTCTTHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHH-cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887665 333466778899999999999999888765544
No 18
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=98.42 E-value=1.7e-05 Score=68.15 Aligned_cols=183 Identities=12% Similarity=0.157 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHhcCC--CCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcccCCCchHHhhHHHHH
Q psy11911 70 QNLHEEAAWLNIVQQRVP--NLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLIDCPHLEPATESHRFE 147 (279)
Q Consensus 70 ~~~~~~~~wLe~~e~~iP--~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~cp~LE~q~~~l~e~ 147 (279)
.+..++..|++..+..+. ++|. ........+.-.+.+..+|..|.+++-.+...|..|..-- .+.+...+..+...
T Consensus 12 r~~~dl~~Wl~e~~~~l~s~d~G~-Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~-~~~i~~rl~~l~~~ 89 (210)
T 3pdy_A 12 RYLQDLLAWVEENQHRVDGAEWGV-DLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPAT-RGAYRDCLGRLDLQ 89 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHH-HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcccccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-hHHHHHHHHHHHHH
Confidence 456788889888776654 3332 3555667888889999999999999999988888764321 12478889999999
Q ss_pred HHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhh
Q psy11911 148 ILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSR 220 (279)
Q Consensus 148 wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~ 220 (279)
|-.|.+.....-.+|+. .-.|-++++++..||...+..+.+...| .-.+.|=.|.++++.+..--.++.
T Consensus 90 ~~~L~~~a~~R~~~L~~----L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~l~ 165 (210)
T 3pdy_A 90 YAKLLNSSKARLRSLES----LHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQ 165 (210)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999988888884 4789999999999999999999876656 234578889999998877667777
Q ss_pred hHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhh
Q psy11911 221 DNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQ 259 (279)
Q Consensus 221 ~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~i 259 (279)
..+++++.-- -.+....++....+.++|..|..-+..+
T Consensus 166 ~~~~~Ll~~~-h~~~~~I~~~~~~l~~~W~~L~~L~~~~ 203 (210)
T 3pdy_A 166 NAGDRLLRED-HPARPTVESFQAALQTQWSWMLQLCCCI 203 (210)
T ss_dssp HHHHHHHHTT-CTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776733 3477778999999999999998766554
No 19
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=98.37 E-value=1.3e-05 Score=67.50 Aligned_cols=163 Identities=11% Similarity=0.159 Sum_probs=118.9
Q ss_pred ChhhhHhhhcchhHHHHHHHHhhcC------ChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHH
Q psy11911 1 MQKYRTFFMNLSHCRSLLESLESHL------DPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHE 74 (279)
Q Consensus 1 mqKhk~FF~~L~h~~~iLEsl~~kl------d~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~ 74 (279)
|+||+.|=..+..+..-++++...- +++..+.-.+--..+..+=..+.+.+..|...|+.++. .-.|..++.+
T Consensus 42 l~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~qf~~~~~~ 120 (216)
T 1u5p_A 42 LKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDD 120 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 3577777666665544444444211 11111222223345666667788889999999998887 4669999999
Q ss_pred HHHHHHHHHhcCC--CCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHHHh
Q psy11911 75 EAAWLNIVQQRVP--NLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEILN 150 (279)
Q Consensus 75 ~~~wLe~~e~~iP--~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~wl~ 150 (279)
+..|+...+..+- ++|. +-+.....+.-++.+..+|..|++++-++.+.|..|... ..+|.++.++..+.++|-.
T Consensus 121 ~~~Wl~e~e~~~~~~~~g~-dl~~v~~ll~kh~~~~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~ 199 (216)
T 1u5p_A 121 EESWIKEKKLLVSSEDYGR-DLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKE 199 (216)
T ss_dssp HHHHHHHHHHHHTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHhcCcccCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 9999988765432 2332 466677889999999999999999999999999999764 4567788999999999999
Q ss_pred hhHHHhhHhHhHHHH
Q psy11911 151 LERSISSGLIKLSTF 165 (279)
Q Consensus 151 l~~kV~~eL~RL~~~ 165 (279)
+.+.+...-.+|+..
T Consensus 200 L~~~~~~R~~~L~~a 214 (216)
T 1u5p_A 200 LKQLAAARGQRLEES 214 (216)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998877777543
No 20
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=98.30 E-value=1.3e-05 Score=66.92 Aligned_cols=144 Identities=12% Similarity=0.153 Sum_probs=107.1
Q ss_pred hhhhHHHHHHHhhhhhhhhcccCCCchHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhc
Q psy11911 112 KVHLVRTTQLVSVCRSITNLIDCPHLEPATESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIE 191 (279)
Q Consensus 112 ~~hq~kL~Q~l~~gk~L~~~V~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~ 191 (279)
.+|-|+-..+-..|.++.. .++.+...+..+..+|-.|.++....-++|+..+..+ .|..+++++..||.....-+.
T Consensus 4 ~~~~~~~~~~~~~~~k~~e--~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq-~F~~d~~el~~Wi~ek~~~a~ 80 (161)
T 3lbx_A 4 MEQFPKETVVESSGPKVLE--TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQ-VFKRDADDLGKWIMEKVNILT 80 (161)
T ss_dssp ------------------C--CSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCchhccCCCCcchhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhcc
Confidence 5677887777778888888 7999999999999999999999999999999999655 899999999999999776654
Q ss_pred c--ccCc----cchhHHHHHHHHhhhhhhhhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhh
Q psy11911 192 S--LNKS----NNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQ 259 (279)
Q Consensus 192 ~--l~vp----d~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~i 259 (279)
. ...| .-+...=.|.+|+.++..--..+...+.+++.--|. +....+..+..+.++|..|......-
T Consensus 81 ~~~~~d~~~v~~ll~kH~afe~El~a~~~~~~~l~~~g~~Li~~~~~-~~~~I~~rl~eL~~~W~~L~~~~~~R 153 (161)
T 3lbx_A 81 DKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHS-AHEETKAHIEELRHLWDLLLELTLEK 153 (161)
T ss_dssp TTSCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCT-THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3445 445677789999999988777777788877786664 88899999999999999998876543
No 21
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=98.21 E-value=3.9e-05 Score=64.06 Aligned_cols=162 Identities=15% Similarity=0.193 Sum_probs=118.7
Q ss_pred ChhhhHhhhcchhHHHHHHHHhhcC------ChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHH
Q psy11911 1 MQKYRTFFMNLSHCRSLLESLESHL------DPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHE 74 (279)
Q Consensus 1 mqKhk~FF~~L~h~~~iLEsl~~kl------d~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~ 74 (279)
+.||+.|-..+..+..-++++...- .++..+.-.+--.++..+=..+.+.+..|...|+.++.- -.|..+..+
T Consensus 39 l~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~-~~f~~~~~e 117 (213)
T 1cun_A 39 RKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEY-QQFVANVEE 117 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 3578888777775543333322110 111112223344566777788899999999999999865 789999999
Q ss_pred HHHHHHHHHhcC--CCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHHHh
Q psy11911 75 EAAWLNIVQQRV--PNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEILN 150 (279)
Q Consensus 75 ~~~wLe~~e~~i--P~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~wl~ 150 (279)
+..||...+..+ |++|. +.+.....+.-++.+..+|..|.+++.++.+.|..|... ..+|.+..++..+..+|-.
T Consensus 118 ~~~Wl~~~e~~l~~~~~g~-~~~~v~~ll~~h~~~~~el~~~~~~i~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~w~~ 196 (213)
T 1cun_A 118 EEAWINEKMTLVASEDYGD-TLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSD 196 (213)
T ss_dssp HHHHHHHHHHHHTCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHH
Confidence 999999877654 33443 566777899999999999999999999999999999875 3344577788888888888
Q ss_pred hhHHHhhHhHhHHH
Q psy11911 151 LERSISSGLIKLST 164 (279)
Q Consensus 151 l~~kV~~eL~RL~~ 164 (279)
+.+.+...-.+|+.
T Consensus 197 l~~~~~~R~~~L~~ 210 (213)
T 1cun_A 197 LEKAAAQRKAKLDE 210 (213)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 88888877777764
No 22
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=98.11 E-value=1.3e-05 Score=61.18 Aligned_cols=107 Identities=9% Similarity=0.024 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccc--chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcccCC-----Cch
Q psy11911 66 ISLDQNLHEEAAWLNIVQQRVPNLSAM--TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLIDCP-----HLE 138 (279)
Q Consensus 66 ~~Ld~~~~~~~~wLe~~e~~iP~v~lV--teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~cp-----~LE 138 (279)
-.|..++.++..||..++..+-+...| ..+.+...+.-++.+..+|..|++++-.+...|+.|+..-.|+ .+.
T Consensus 5 ~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~ 84 (119)
T 3uun_A 5 DRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQ 84 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 468899999999999887765332223 3567788999999999999999999999999999998876543 588
Q ss_pred HHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHH
Q psy11911 139 PATESHRFEILNLERSISSGLIKLSTFTEYWLEY 172 (279)
Q Consensus 139 ~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y 172 (279)
.++..+..+|-.+...+...-.+|+..+..+-.|
T Consensus 85 ~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q~~ 118 (119)
T 3uun_A 85 EQMNLLNSRWECLRVASMEKQSNLHRVLMDLQNQ 118 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999998888766554
No 23
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=98.11 E-value=0.00013 Score=61.12 Aligned_cols=160 Identities=8% Similarity=0.010 Sum_probs=116.6
Q ss_pred ChhhhHhhhcchhHHHHHHHHh-------hcC-ChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHH
Q psy11911 1 MQKYRTFFMNLSHCRSLLESLE-------SHL-DPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNL 72 (279)
Q Consensus 1 mqKhk~FF~~L~h~~~iLEsl~-------~kl-d~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~ 72 (279)
|++|+.|-..+.....-++++. ..- +| ..+.-.+....|..+=..+.+.+..|...|+.+++ |..|..++
T Consensus 39 l~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~-~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~ 116 (214)
T 1s35_A 39 LQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDP-EYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDA 116 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 3577877777764443333332 211 12 12333444566777778899999999999999887 99999999
Q ss_pred HHHHHHHHHHHhcC--CCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHH
Q psy11911 73 HEEAAWLNIVQQRV--PNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEI 148 (279)
Q Consensus 73 ~~~~~wLe~~e~~i--P~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~w 148 (279)
.++..||...+..+ +++|. +.+....-+.-++.+..+|..|..++-++...|.+|... ..++.+...+..+..+|
T Consensus 117 ~~~~~Wl~~~E~~l~~~~~g~-~~~~v~~llkkh~~f~~~l~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~~~~~l~~rw 195 (214)
T 1s35_A 117 KQAEAILSNQEYTLAHLEPPD-SLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRH 195 (214)
T ss_dssp HHHHHHHHHHHHHHHCCCCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCC-CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 99999999888764 33332 467777889999999999999999999999999999765 22223446677777777
Q ss_pred HhhhHHHhhHhHhHH
Q psy11911 149 LNLERSISSGLIKLS 163 (279)
Q Consensus 149 l~l~~kV~~eL~RL~ 163 (279)
=.+.+++.....+|+
T Consensus 196 ~~l~~~~~~R~~~L~ 210 (214)
T 1s35_A 196 RKNNEKAQEASVLLR 210 (214)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777776666664
No 24
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=98.09 E-value=3.8e-05 Score=64.35 Aligned_cols=135 Identities=7% Similarity=0.129 Sum_probs=107.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCC--CC-cccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc--cCCC
Q psy11911 62 ASKWISLDQNLHEEAAWLNIVQQRVP--NL-SAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI--DCPH 136 (279)
Q Consensus 62 ls~W~~Ld~~~~~~~~wLe~~e~~iP--~v-~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V--~cp~ 136 (279)
+.++-.|-.++.++..|+..++..+- ++ ..| .....-+.-++.++..|+.|.+++-++...|..|+..- .+|.
T Consensus 3 ~~dl~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~--~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~ 80 (185)
T 3lbx_B 3 TADKFRFFSMARDLLSWMESIIRQIETQERPRDV--SSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEE 80 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CC--SSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCH--HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHH
Confidence 45677888999999999988876432 11 122 12234566788999999999999999999999998764 3456
Q ss_pred chHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCccch
Q psy11911 137 LEPATESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKSNNM 199 (279)
Q Consensus 137 LE~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vpd~l 199 (279)
++..+..+.+.|-.+.+.....-.+|...+. +..|.++++.+..||...+..|.+-.+|+++
T Consensus 81 i~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~-l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl 142 (185)
T 3lbx_B 81 IREKLQQVMSRRKEMNEKWEARWERLRMLLE-VCQFSRDASVAEAWLIAQEPYLASGDFGHTV 142 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHhHhhhccCCCCCCH
Confidence 8999999999999999999988888988774 5689999999999999999999875555443
No 25
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=98.02 E-value=5.4e-05 Score=57.95 Aligned_cols=104 Identities=10% Similarity=0.046 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccc--chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcccCC-----Cch
Q psy11911 66 ISLDQNLHEEAAWLNIVQQRVPNLSAM--TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLIDCP-----HLE 138 (279)
Q Consensus 66 ~~Ld~~~~~~~~wLe~~e~~iP~v~lV--teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~cp-----~LE 138 (279)
..|...+.++..||..++..+-+...+ ..+.+...+.-++.+..+|..|++++-.+...|+.|...-.++ .+.
T Consensus 5 ~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~ 84 (118)
T 3uul_A 5 DSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQ 84 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHH
Confidence 358889999999999887765443333 3566778999999999999999999999999999998765443 378
Q ss_pred HHhhHHHHHHHhhhHHHhhHhHhHHHHHHHH
Q psy11911 139 PATESHRFEILNLERSISSGLIKLSTFTEYW 169 (279)
Q Consensus 139 ~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW 169 (279)
.++..+..+|-.+...+...-.+|+..+..+
T Consensus 85 ~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~ 115 (118)
T 3uul_A 85 EQMTLLNARWEALRVESMERQSRLHDALMEL 115 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999998876554
No 26
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=97.88 E-value=0.00021 Score=58.45 Aligned_cols=124 Identities=11% Similarity=0.120 Sum_probs=102.7
Q ss_pred cCCCchHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhcc--ccCccch----hHHHHHH
Q psy11911 133 DCPHLEPATESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIES--LNKSNNM----KSYWELK 206 (279)
Q Consensus 133 ~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~--l~vpd~l----~~F~Efs 206 (279)
+.+.+......+..+|-.|.++....-++|+..+. +..|..+++++..||.....-+.. ...|.++ ..+=.|.
T Consensus 13 ~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~~~~~~~~~~d~~~v~~~l~kH~afe 91 (149)
T 3f31_A 13 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFE 91 (149)
T ss_dssp CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSCSSCSSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHH
Confidence 56678889999999999999999999999999995 899999999999999998887653 3334444 4556799
Q ss_pred HHhhhhhhhhhhhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhh
Q psy11911 207 AQIEFYNTLLDRSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTE 258 (279)
Q Consensus 207 keve~ksslk~s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~ 258 (279)
+|+.++..--..+...+.+++.--| -+....+.-+..+..+|..|......
T Consensus 92 ~El~a~~~~l~~v~~~g~~Li~~~~-~~~~~I~~rl~~l~~~W~~L~~~~~~ 142 (149)
T 3f31_A 92 AEVQANSGAIVKLDETGNLMISEGH-FASETIRTRLMELHRQWELLLEKMRE 142 (149)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHTC-TTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988766777777777777556 48888999999999999999876543
No 27
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=97.71 E-value=0.00036 Score=63.50 Aligned_cols=156 Identities=13% Similarity=0.131 Sum_probs=111.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC--CCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc-
Q psy11911 55 SQQMALAASKWISLDQNLHEEAAWLNIVQQRV--PNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL- 131 (279)
Q Consensus 55 g~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~~i--P~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~- 131 (279)
|..|+.+.+-| .|-.++.++..|+.-=+... -|++-|. .++......|+.+...|..|++++-++.+.|..|...
T Consensus 1 ~~rL~~l~~L~-qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~-~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~ 78 (283)
T 3pe0_A 1 GSHMRSLESLH-SFVAAATKELMWLNEKEEEEVGFDWSDRN-TNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED 78 (283)
T ss_dssp ------CHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCSTTC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ChhHHHHHHHH-HHHHHHHHHHHHHHHHhHHhhcCCchhhH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 55666666667 67788999999998776652 2333332 1366666779999999999999999999999999763
Q ss_pred -ccCCCchHHhhHHHHHHHhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc----------cchh
Q psy11911 132 -IDCPHLEPATESHRFEILNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS----------NNMK 200 (279)
Q Consensus 132 -V~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp----------d~l~ 200 (279)
..+|.++..+..+...|-.|.+.....=.+|....+. -+|..+++++..||.-..+++..+..+ .=|+
T Consensus 79 hp~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~-~qF~~da~e~e~Wl~~~~e~~~~~~s~d~g~d~~s~~~LLk 157 (283)
T 3pe0_A 79 HPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAY-FQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQ 157 (283)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHTC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHH
Confidence 4566789999999999999999998888888877764 569999999999998444444322222 2344
Q ss_pred HHHHHHHHhhhhh
Q psy11911 201 SYWELKAQIEFYN 213 (279)
Q Consensus 201 ~F~Efskeve~ks 213 (279)
..-.|.++++.+.
T Consensus 158 kh~~le~~l~~~~ 170 (283)
T 3pe0_A 158 DAQDEKEQLNEYK 170 (283)
T ss_dssp CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555666666554
No 28
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=97.70 E-value=0.00033 Score=57.29 Aligned_cols=124 Identities=10% Similarity=0.064 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHhhhhhhHH
Q psy11911 38 KQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHEEAAWLNIVQQRVPNLSAMTCSDYKQYESLFKALDEDMKVHLVR 117 (279)
Q Consensus 38 ~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~~iP~v~lVteerl~erIslYQ~l~~~l~~hq~k 117 (279)
..+..+=..+.+.|..|...|+.++. +-.|..++.++..|+...+....+.+.-....+...+.-.+.+...|..|+++
T Consensus 22 ~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~~~~~~~~~~d~~~v~~~l~kH~afe~El~a~~~~ 100 (149)
T 3f31_A 22 QQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGA 100 (149)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSCSSCSSSCHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566778899999999999995 99999999999999998877654432223445667788999999999999999
Q ss_pred HHHHHhhhhhhhhcc--cCCCchHHhhHHHHHHHhhhHHHhhHhHhH
Q psy11911 118 TTQLVSVCRSITNLI--DCPHLEPATESHRFEILNLERSISSGLIKL 162 (279)
Q Consensus 118 L~Q~l~~gk~L~~~V--~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL 162 (279)
+-++...|+.|...= ..+.+...+..+..+|=.|.++...-=.+|
T Consensus 101 l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L 147 (149)
T 3f31_A 101 IVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKL 147 (149)
T ss_dssp HHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998762 234566777777778877777766544444
No 29
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=97.70 E-value=0.0024 Score=62.17 Aligned_cols=179 Identities=14% Similarity=0.160 Sum_probs=127.8
Q ss_pred hhhhHhhhcchhHHHHHHHHhhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy11911 2 QKYRTFFMNLSHCRSLLESLESHLDPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHEEAAWLNI 81 (279)
Q Consensus 2 qKhk~FF~~L~h~~~iLEsl~~kld~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~wLe~ 81 (279)
+||+.|=..+.....=++.+..... .+ .--..|..+=..+++.|..|...|+. -| .|-.++.++..|+..
T Consensus 42 qKH~~lE~eI~a~~~~v~~l~~~a~----~~--~~~~~L~~~y~~L~~~a~~Rr~~Le~---L~-qFl~d~~ee~~Wi~E 111 (450)
T 3r6n_A 42 NSHRGIHNSIGDYRWQLDKIKADLR----EK--SAIYQLEEEYENLLKASFERMDHLRQ---LQ-NIIQATSREIMWIND 111 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC----CH--HHHHHHHHHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc----Cc--HHHHHHHHHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHH
Confidence 5666665555544444444443221 11 11245566667788899999999983 33 577889999999976
Q ss_pred HHhcC--CCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHHHhhhHHHhh
Q psy11911 82 VQQRV--PNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEILNLERSISS 157 (279)
Q Consensus 82 ~e~~i--P~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~wl~l~~kV~~ 157 (279)
-+..+ .+.|-- -.++.--...|+.+...|+.|.+++-++.+.|+.|+.. -..|.++..+..+..+|-.|.+.+..
T Consensus 112 Ke~~~~s~d~gd~-l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~ 190 (450)
T 3r6n_A 112 CEEEELLYDWSDK-NTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKC 190 (450)
T ss_dssp HHHHHHSCCCSTT-CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCcC-hhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 54432 222210 01122336789999999999999999999999999754 34456999999999999999999988
Q ss_pred HhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhcc
Q psy11911 158 GLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIES 192 (279)
Q Consensus 158 eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~ 192 (279)
.=.+|...... -+|..++++.+.||..-+.-|.+
T Consensus 191 R~~~L~~a~~~-~QF~~Da~EaesWL~eke~~l~s 224 (450)
T 3r6n_A 191 IDVHLKENAAY-FQFFEEAQSTEAYLKGLQDSIRK 224 (450)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHhcc
Confidence 87888776553 48999999999999988777764
No 30
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=97.67 E-value=0.00015 Score=55.42 Aligned_cols=98 Identities=12% Similarity=0.181 Sum_probs=79.3
Q ss_pred HHHHHhhHhHHHHHHHHHHhhhccccC-c-------cchhHHHHHHHHhhhhhhhhhhhhhHHHhhhcccCcc--hHHHH
Q psy11911 169 WLEYQTLADRLESWMDAHQNQIESLNK-S-------NNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVFPVS--DEVLQ 238 (279)
Q Consensus 169 W~~Y~~~s~~L~~WL~sA~~~L~~l~v-p-------d~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~~i~--De~~~ 238 (279)
..+|+...++|..||..++..|..... | ..+..+=.|.++++.|.+.-.++...+.+.+.--+.+ |...+
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i 83 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEI 83 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHH
Confidence 357999999999999999999986432 3 6778899999999999988888888888777644444 34578
Q ss_pred HHHHHhHHHHHHHHHhhhhhhccCCccc
Q psy11911 239 RQLYGQLEDRWNKLVSCVTEQNPSFDGN 266 (279)
Q Consensus 239 R~~l~q~e~~W~~l~~~ip~iQe~~~~~ 266 (279)
+..+..+.++|..|......-+..|...
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~~L~~a 111 (118)
T 3uul_A 84 QEQMTLLNARWEALRVESMERQSRLHDA 111 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887766655443
No 31
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=97.66 E-value=0.00045 Score=58.69 Aligned_cols=162 Identities=12% Similarity=0.156 Sum_probs=105.3
Q ss_pred hhhhHhhhcchh-HHHHHHH-------HhhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHH
Q psy11911 2 QKYRTFFMNLSH-CRSLLES-------LESHLDPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLH 73 (279)
Q Consensus 2 qKhk~FF~~L~h-~~~iLEs-------l~~kld~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~ 73 (279)
.||+.|=..+.. ...-+++ |-..=.|. .+.-..--..+..+=..+.+.+..|+..|+.++ ..-.|-.+..
T Consensus 41 ~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~-~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~F~~~~~ 118 (218)
T 3edu_A 41 DKFRDFARETGAIGQERVDNVNAFIERLIDAGHSE-AATIAEWKDGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGA 118 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 578888887764 2222222 22221222 222233345666777888899999999999987 6788999999
Q ss_pred HHHHHHHHHHhcCCCCccc--chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc---cCCCchHHhhHHHHHH
Q psy11911 74 EEAAWLNIVQQRVPNLSAM--TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI---DCPHLEPATESHRFEI 148 (279)
Q Consensus 74 ~~~~wLe~~e~~iP~v~lV--teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V---~cp~LE~q~~~l~e~w 148 (279)
++..|++..+..+|+ .+ ...-+..-+.-.+.+..+|..+++++-++.+.|.+|..+- ..|.+..++..+.+.|
T Consensus 119 e~~~Wl~ek~~~l~~--~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W 196 (218)
T 3edu_A 119 EILGLIDEKHRELPE--DVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAW 196 (218)
T ss_dssp HHHHHHHHHHHCCC---------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCC--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHH
Confidence 999999999998862 22 1223345556678899999999999999999999998752 1345667788888889
Q ss_pred HhhhHHHhhHhHhHHHHHH
Q psy11911 149 LNLERSISSGLIKLSTFTE 167 (279)
Q Consensus 149 l~l~~kV~~eL~RL~~~lk 167 (279)
-.++.++...-.+|+..++
T Consensus 197 ~~L~~~~~~R~~~L~~a~~ 215 (218)
T 3edu_A 197 QALLDACAGRRTQLVDTAD 215 (218)
T ss_dssp HHHHHHTC-----------
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888888877777765443
No 32
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=97.64 E-value=0.00042 Score=57.65 Aligned_cols=128 Identities=9% Similarity=0.012 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHhhhhh
Q psy11911 35 ELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHEEAAWLNIVQQRVPNLSAMTCSDYKQYESLFKALDEDMKVH 114 (279)
Q Consensus 35 ~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~~iP~v~lVteerl~erIslYQ~l~~~l~~h 114 (279)
+--..+..+=..+.+.|..|...|+.++.-| .|..++.++..|+...+....+...-....+..-+.-.+.+...|..|
T Consensus 29 ~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq-~F~~d~~el~~Wi~ek~~~a~~~~~~d~~~v~~ll~kH~afe~El~a~ 107 (161)
T 3lbx_A 29 ERRQEVLTRYQSFKERVAERGQKLEDSYHLQ-VFKRDADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTK 107 (161)
T ss_dssp GHHHHGGGHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777889999999999999999666 899999999999998766543322223445556788899999999999
Q ss_pred hHHHHHHHhhhhhhhhcc--cCCCchHHhhHHHHHHHhhhHHHhhHhHhHH
Q psy11911 115 LVRTTQLVSVCRSITNLI--DCPHLEPATESHRFEILNLERSISSGLIKLS 163 (279)
Q Consensus 115 q~kL~Q~l~~gk~L~~~V--~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~ 163 (279)
.+++.++...|+.|...= ..+.+...+.++...|=.|.+.+..--.||.
T Consensus 108 ~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~ 158 (161)
T 3lbx_A 108 SRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLL 158 (161)
T ss_dssp HHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998641 1234556677777777777777666555554
No 33
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=97.63 E-value=0.0031 Score=54.73 Aligned_cols=166 Identities=6% Similarity=0.050 Sum_probs=118.3
Q ss_pred hhhhHhhhcchhHHHHHHHHhhcCChhh------hhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHH-------HH
Q psy11911 2 QKYRTFFMNLSHCRSLLESLESHLDPAT------RNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWI-------SL 68 (279)
Q Consensus 2 qKhk~FF~~L~h~~~iLEsl~~kld~~t------~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~-------~L 68 (279)
.||+.|=..+..+..-++++...-.... ...-..-..++..+=..+.+.+..|...|+.++..=. .|
T Consensus 55 kkh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF 134 (250)
T 1quu_A 55 RKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEF 134 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677776666655444444332111111 1111222466777888899999999999999998876 67
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHHH---hhhhhhhhcc------cCCCch
Q psy11911 69 DQNLHEEAAWLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQLV---SVCRSITNLI------DCPHLE 138 (279)
Q Consensus 69 d~~~~~~~~wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~l---~~gk~L~~~V------~cp~LE 138 (279)
-.+..++..|+...+..+++.... +.+.+...+.-.+.++.++.++.+..-.+. ..+..|...- ..|...
T Consensus 135 ~~~a~~~~~Wl~~~e~~l~~~~~~~d~e~v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~ 214 (250)
T 1quu_A 135 AKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYST 214 (250)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCCCCSTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCS
T ss_pred HHHhHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccc
Confidence 777889999999999998887644 466777888888888877777776555554 4445554433 468888
Q ss_pred HHhhHHHHHHHhhhHHHhhHhHhHHHHHH
Q psy11911 139 PATESHRFEILNLERSISSGLIKLSTFTE 167 (279)
Q Consensus 139 ~q~~~l~e~wl~l~~kV~~eL~RL~~~lk 167 (279)
..+..+...|-++.+.+...-.+|+..+.
T Consensus 215 ~~~~~l~~~W~~L~~~~~~R~~~L~~~l~ 243 (250)
T 1quu_A 215 VTMDELRTKWDKVKQLVPIRDQSLQEELA 243 (250)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999988888876653
No 34
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=97.60 E-value=0.00019 Score=54.67 Aligned_cols=99 Identities=13% Similarity=0.167 Sum_probs=80.0
Q ss_pred HHHHHhhHhHHHHHHHHHHhhhcccc-Cc-------cchhHHHHHHHHhhhhhhhhhhhhhHHHhhhcccCcc--hHHHH
Q psy11911 169 WLEYQTLADRLESWMDAHQNQIESLN-KS-------NNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVFPVS--DEVLQ 238 (279)
Q Consensus 169 W~~Y~~~s~~L~~WL~sA~~~L~~l~-vp-------d~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~~i~--De~~~ 238 (279)
+.+|+...++|..||..++..|.... +| ..+..+=.|.++++.+.+.-.++...+.+++.--+.. +...+
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i 83 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEV 83 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 56899999999999999999998633 33 6777888999999999988888888888776644433 34568
Q ss_pred HHHHHhHHHHHHHHHhhhhhhccCCcccc
Q psy11911 239 RQLYGQLEDRWNKLVSCVTEQNPSFDGNV 267 (279)
Q Consensus 239 R~~l~q~e~~W~~l~~~ip~iQe~~~~~~ 267 (279)
+..+..+.++|..|......-+..|...+
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~~Le~aL 112 (119)
T 3uun_A 84 QEQMNLLNSRWECLRVASMEKQSNLHRVL 112 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887776665544
No 35
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=97.53 E-value=0.00017 Score=61.42 Aligned_cols=108 Identities=10% Similarity=0.085 Sum_probs=89.1
Q ss_pred HHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhHHHhhhcccCcchHHHHHHH
Q psy11911 169 WLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVFPVSDEVLQRQL 241 (279)
Q Consensus 169 W~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~~i~De~~~R~~ 241 (279)
+.+|.....+|..||...+..|.+-.+| .-|...=+|+++++.+.+-..++...+.+++.-.+ .+....+..
T Consensus 15 ~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~-~~~~~i~~~ 93 (218)
T 3fb2_A 15 LQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGH-YASPEIKQK 93 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTC-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CchHHHHHH
Confidence 5688999999999999999999875555 55677889999999999877777777776666443 367789999
Q ss_pred HHhHHHHHHHHHhhhhhhccCCccccccchhhhccc
Q psy11911 242 YGQLEDRWNKLVSCVTEQNPSFDGNVDFTQFEYELD 277 (279)
Q Consensus 242 l~q~e~~W~~l~~~ip~iQe~~~~~~~~~~~~~~~~ 277 (279)
+.++.++|..|......-+..+.....+-+|.-+++
T Consensus 94 l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F~~d~~ 129 (218)
T 3fb2_A 94 LDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCE 129 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988888877765443
No 36
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=97.50 E-value=0.0053 Score=59.71 Aligned_cols=193 Identities=11% Similarity=0.098 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccc-hhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcccCCCchHHhhHHHHHH
Q psy11911 70 QNLHEEAAWLNIVQQRVPNLSAMT-CSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLIDCPHLEPATESHRFEI 148 (279)
Q Consensus 70 ~~~~~~~~wLe~~e~~iP~v~lVt-eerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~cp~LE~q~~~l~e~w 148 (279)
.+..++..|++..+..+++-..=. ......-+.--+.+..+|+.|..++-.+...+.. -..++.+...|
T Consensus 9 r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~----------~~~~~~L~~~y 78 (450)
T 3r6n_A 9 HVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLRE----------KSAIYQLEEEY 78 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----------cHHHHHHHHHH
Confidence 456789999999999998754331 2223445556677888999999999888766431 13578888999
Q ss_pred HhhhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccc-------cCccchhHHHHHHHHhhhhhhhhhhhhh
Q psy11911 149 LNLERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESL-------NKSNNMKSYWELKAQIEFYNTLLDRSRD 221 (279)
Q Consensus 149 l~l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l-------~vpd~l~~F~Efskeve~ksslk~s~~~ 221 (279)
-.|.+......++|++ .-+|-+++++...||..=+..+.+- .|+.-++.|=.|.+|++.|.+--+++..
T Consensus 79 ~~L~~~a~~Rr~~Le~----L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~ 154 (450)
T 3r6n_A 79 ENLLKASFERMDHLRQ----LQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQ 154 (450)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHH
Confidence 9999999888888874 3488999999999999877766653 2335567889999999999988888888
Q ss_pred HHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhhccCCccccccchhhhccc
Q psy11911 222 NFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDGNVDFTQFEYELD 277 (279)
Q Consensus 222 ~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~~~~~~~~~~~~~ 277 (279)
.+++++.--. -.....++.+..+.++|..|..-.......+..+..|-||-.+.+
T Consensus 155 ~G~~Li~~~H-pas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~ 209 (450)
T 3r6n_A 155 ESDQLVLNQH-PASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQ 209 (450)
T ss_dssp HHHHHHHTTC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 8887766332 356667888999999999999999999999999999999876554
No 37
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=97.17 E-value=0.0084 Score=51.30 Aligned_cols=150 Identities=15% Similarity=0.211 Sum_probs=101.9
Q ss_pred ChhhhHhhhcchhHHHHHHHHhhc---CChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHH
Q psy11911 1 MQKYRTFFMNLSHCRSLLESLESH---LDPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHEEAA 77 (279)
Q Consensus 1 mqKhk~FF~~L~h~~~iLEsl~~k---ld~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~ 77 (279)
++||+.|=..+..+..-++++... +.|....--.+--..+..+=..+++-|..|+..|+ .+ -.|-.+..++..
T Consensus 44 lkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~i~~rl~~l~~~~~~L~~~a~~R~~~L~-~L---~~f~~~~~~~~~ 119 (210)
T 3pdy_A 44 LGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLE-SL---HSFVAAATKELM 119 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHH
Confidence 478999888888887777777543 44432221222234555666778889999999999 33 567788889999
Q ss_pred HHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc--cCCCchHHhhHHHHHHHhhhHH
Q psy11911 78 WLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI--DCPHLEPATESHRFEILNLERS 154 (279)
Q Consensus 78 wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V--~cp~LE~q~~~l~e~wl~l~~k 154 (279)
|+..-+..+-+...- .-++..--..-|+.+..+|..|.+++-++.+.|..|+..= ..|.++.....+-.+|-.+.+-
T Consensus 120 Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~l~~~~~~Ll~~~h~~~~~I~~~~~~l~~~W~~L~~L 199 (210)
T 3pdy_A 120 WLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQL 199 (210)
T ss_dssp HHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 998776654322211 1234555566799999999999999999999999997752 2344555566666666555443
No 38
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=97.08 E-value=0.0013 Score=56.50 Aligned_cols=152 Identities=10% Similarity=0.107 Sum_probs=90.2
Q ss_pred hhhhHhhhcchhHHHHHHHH---hhcCChhhhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHH
Q psy11911 2 QKYRTFFMNLSHCRSLLESL---ESHLDPATRNKFSELHKQLHQQACDILDKAAIRSQQMALAASKWISLDQNLHEEAAW 78 (279)
Q Consensus 2 qKhk~FF~~L~h~~~iLEsl---~~kld~~t~~k~~~~h~eL~~~A~~iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~w 78 (279)
+||+.|=..+..+..=++.+ ..++.+.....-.+-...+..+=..+++.|..|+..|+ .--.|..+...+..|
T Consensus 60 ~kh~~~e~ei~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le----~l~~F~~~~~~~~~W 135 (224)
T 2iak_A 60 ENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLD----TLHNFVTRATNELIW 135 (224)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHGGGCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 56666666655433222222 22222111122223344555566667778889999998 455688888899999
Q ss_pred HHHHHhcC--CCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHHhhHHHHHHHhhhHH
Q psy11911 79 LNIVQQRV--PNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPATESHRFEILNLERS 154 (279)
Q Consensus 79 Le~~e~~i--P~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q~~~l~e~wl~l~~k 154 (279)
+...+..+ ++.|. .-+.....+.-++.+.++|..|.+++-++.+.|..|... ..++.++..+..+...|-.+.+.
T Consensus 136 i~eke~~~~s~d~g~-~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~L~~~~h~~~~~I~~~~~~l~~~W~~L~~l 214 (224)
T 2iak_A 136 LNEKEESEVAYDWSE-RNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQL 214 (224)
T ss_dssp HHHHHHHHCCC----------------CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCC-CchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 98877643 33332 233455677889999999999999999999999999763 33344666777777777777766
Q ss_pred HhhH
Q psy11911 155 ISSG 158 (279)
Q Consensus 155 V~~e 158 (279)
+...
T Consensus 215 ~~~R 218 (224)
T 2iak_A 215 CQCV 218 (224)
T ss_dssp HC--
T ss_pred HHHH
Confidence 6543
No 39
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=96.85 E-value=0.0023 Score=53.43 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=86.8
Q ss_pred HHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhHHHhhhcccCcchHHHHHH
Q psy11911 168 YWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVFPVSDEVLQRQ 240 (279)
Q Consensus 168 hW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~~i~De~~~R~ 240 (279)
.+-+|.....++..||......|.+=.+| .-|..+=+|+++++.+..--..+...+.+++.-.+ -+....+.
T Consensus 5 dl~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~-~~~~~i~~ 83 (185)
T 3lbx_B 5 DKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQH-QASEEIRE 83 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CcHHHHHH
Confidence 35689999999999999999999864444 56788999999999998777767666666666443 36677899
Q ss_pred HHHhHHHHHHHHHhhhhhhccCCccccccchhhhccc
Q psy11911 241 LYGQLEDRWNKLVSCVTEQNPSFDGNVDFTQFEYELD 277 (279)
Q Consensus 241 ~l~q~e~~W~~l~~~ip~iQe~~~~~~~~~~~~~~~~ 277 (279)
.+..|.++|..|...-..-+..+.....+-+|.-+.+
T Consensus 84 ~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~~F~~d~~ 120 (185)
T 3lbx_B 84 KLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDAS 120 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999988888888877777777765544
No 40
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=94.77 E-value=0.1 Score=39.52 Aligned_cols=91 Identities=15% Similarity=0.162 Sum_probs=64.9
Q ss_pred HHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHHHhhhhhhhhhhhhhHHHhhhcccCcchHHHHHH
Q psy11911 168 YWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVFPVSDEVLQRQ 240 (279)
Q Consensus 168 hW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~~i~De~~~R~ 240 (279)
.+..|.++++++..||...+.-|.+-.+| .-+..+-.|-++++.+..-=......+++++. -.-.|....+.
T Consensus 4 ~lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~-~~h~~~~~I~~ 82 (107)
T 2spc_A 4 DLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIA-QNHYASNLVDE 82 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCHHHHHH
Confidence 36789999999999999988888764444 55677888888888765322233334443333 22246667888
Q ss_pred HHHhHHHHHHHHHhhhhhh
Q psy11911 241 LYGQLEDRWNKLVSCVTEQ 259 (279)
Q Consensus 241 ~l~q~e~~W~~l~~~ip~i 259 (279)
.+.++.++|..|......-
T Consensus 83 r~~~l~~~w~~L~~~~~~R 101 (107)
T 2spc_A 83 KRKQVLERWRHLKEGLIEK 101 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998876543
No 41
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=94.49 E-value=6 Score=42.07 Aligned_cols=137 Identities=9% Similarity=0.099 Sum_probs=96.4
Q ss_pred CCchHHhhHHHHHHHhhhHH-------HhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchh
Q psy11911 135 PHLEPATESHRFEILNLERS-------ISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMK 200 (279)
Q Consensus 135 p~LE~q~~~l~e~wl~l~~k-------V~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~ 200 (279)
|.-+...+.+...|-.|..- +..+|.|++.+..-=.+|++.++..+.|+...+..|.+-+.. .-++
T Consensus 847 p~~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g~dL~~Vqal~K 926 (1010)
T 1g8x_A 847 APAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLK 926 (1010)
T ss_dssp CCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSCCSTTTTGGGTT
T ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHH
Confidence 33344567788889888744 668899999988888999999999999999999999863322 3445
Q ss_pred HHHHHHHHhhhhhh-hhhhhhhHHHhhhcccCcchHHHHHHHHHhH-HHHHHHHHhhhhhhccCCccccccchh
Q psy11911 201 SYWELKAQIEFYNT-LLDRSRDNFENAMRVFPVSDEVLQRQLYGQL-EDRWNKLVSCVTEQNPSFDGNVDFTQF 272 (279)
Q Consensus 201 ~F~Efskeve~kss-lk~s~~~~~~qaL~~~~i~De~~~R~~l~q~-e~~W~~l~~~ip~iQe~~~~~~~~~~~ 272 (279)
..=.|.+++..+.. +....+..++.+.. -.--|....++-..+| .++|..|.+....=+++|......-|+
T Consensus 927 Khea~e~dl~a~e~ri~~~l~~~a~eL~~-~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~~ 999 (1010)
T 1g8x_A 927 NLEAFDGECQSLEGQSNSDLLSILAQLTE-LNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQK 999 (1010)
T ss_dssp SHHHHTTTTTHHHHTHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666677765542 33234444443334 3334666677778888 589999999888888887777666553
No 42
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=94.26 E-value=2.8 Score=37.32 Aligned_cols=196 Identities=9% Similarity=-0.050 Sum_probs=114.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHh----cCCCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhh
Q psy11911 55 SQQMALAASKWISLDQNLHEEAAWLNIVQQ----RVPNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITN 130 (279)
Q Consensus 55 g~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~----~iP~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~ 130 (279)
|+...-.=..|...+.-..++-.|.+.-.. +-+.-+++.-+.+. .-|...+. .+.-||+..--+..-.+-.
T Consensus 3 ~~~~~e~e~~~~eYe~~as~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l---~~f~~fr~--~ekppk~~EK~~Le~ll~~ 77 (235)
T 2odv_A 3 HMRANELQLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILW---SQFLKFKE--MELPAKEADKNRSKGIYQS 77 (235)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCSSHHHHHHHH---HHHHHHHH--HTHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH---HHHHHHHh--ccCCHHHHHHHHHHHHHHH
Confidence 344444556789999999999999887543 44433444322222 22222222 2223332222221111111
Q ss_pred -------cccCCCchHHhhHHHHHHHhhhH-------HHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhc----c
Q psy11911 131 -------LIDCPHLEPATESHRFEILNLER-------SISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIE----S 192 (279)
Q Consensus 131 -------~V~cp~LE~q~~~l~e~wl~l~~-------kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~----~ 192 (279)
--.-|.-+...+.+...|-.|.. -+..++.||+.+-.-=.+|++.++....||..+...|+ .
T Consensus 78 lqtklr~~~~~ppeg~~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~d~~~ 157 (235)
T 2odv_A 78 LEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSDVRL 157 (235)
T ss_dssp HHHHHHTTSSCCCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 00225555568888889999875 36789999999888889999999999999999999883 2
Q ss_pred ccCccchhHHHHHHHHhhhhh-hhhh--hhhhHHHhhhcccCcchHHHHHHHHHhHHHHHHHHHhhhhhh
Q psy11911 193 LNKSNNMKSYWELKAQIEFYN-TLLD--RSRDNFENAMRVFPVSDEVLQRQLYGQLEDRWNKLVSCVTEQ 259 (279)
Q Consensus 193 l~vpd~l~~F~Efskeve~ks-slk~--s~~~~~~qaL~~~~i~De~~~R~~l~q~e~~W~~l~~~ip~i 259 (279)
+.+..-+...=+|...+.... .++. ..+..+. . ..--|.....+-...|-++|..|.+.....
T Consensus 158 l~~~~a~k~~e~ie~dL~~~e~~i~~l~~~a~~L~---~-~~y~~a~~i~~r~~~l~~~w~~L~~~~~~r 223 (235)
T 2odv_A 158 LAAGKVPQRAGEVERDLDKADSMIRLLFNDVQTLK---D-GRHPQGEQMYRRVYRLHKRLVAIRTEYNLR 223 (235)
T ss_dssp TTTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHH---H-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444432333334445544333 2222 3333332 2 233466666677899999999999887554
No 43
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=93.34 E-value=0.087 Score=39.89 Aligned_cols=97 Identities=7% Similarity=0.081 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhc--ccCCCchHH
Q psy11911 65 WISLDQNLHEEAAWLNIVQQRVP--NLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNL--IDCPHLEPA 140 (279)
Q Consensus 65 W~~Ld~~~~~~~~wLe~~e~~iP--~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~--V~cp~LE~q 140 (279)
+-.|..+..+...|+...+.-+. ++|. +-+.....+.-.+.+..+|..|..++.++...|..|... ...+.+...
T Consensus 5 lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~-~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~r 83 (107)
T 2spc_A 5 LQLYMRDCELAESWMSAREAFLNADDDAN-AGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEK 83 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 56788888888888887654332 2221 456667888899999999999999999999999999764 555567777
Q ss_pred hhHHHHHHHhhhHHHhhHhHhH
Q psy11911 141 TESHRFEILNLERSISSGLIKL 162 (279)
Q Consensus 141 ~~~l~e~wl~l~~kV~~eL~RL 162 (279)
..++.++|-.|.+.....-.+|
T Consensus 84 ~~~l~~~w~~L~~~~~~Rr~~L 105 (107)
T 2spc_A 84 RKQVLERWRHLKEGLIEKRSRL 105 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 7778888888877776655554
No 44
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=88.58 E-value=0.85 Score=41.20 Aligned_cols=115 Identities=10% Similarity=0.225 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHhhHhHHHHHHHHHHhhhcc--cc-----CccchhHHHHHHHHhhhhhhhhhhhhhHHHhhhcccCcc
Q psy11911 161 KLSTFTEYWLEYQTLADRLESWMDAHQNQIES--LN-----KSNNMKSYWELKAQIEFYNTLLDRSRDNFENAMRVFPVS 233 (279)
Q Consensus 161 RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~--l~-----vpd~l~~F~Efskeve~ksslk~s~~~~~~qaL~~~~i~ 233 (279)
||..+...| .|-+++++...|+..=+...-. +. ++.-++.|=.|.+|+.+|..--+.+...+++++. ..--
T Consensus 3 rL~~l~~L~-qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~-~~hp 80 (283)
T 3pe0_A 3 HMRSLESLH-SFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLR-EDHP 80 (283)
T ss_dssp ----CHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCCT
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCC
Confidence 555555555 8889999999999987766321 11 1133345889999999998877777777777666 3334
Q ss_pred hHHHHHHHHHhHHHHHHHHHhhhhhhccCCccccccchhhhccc
Q psy11911 234 DEVLQRQLYGQLEDRWNKLVSCVTEQNPSFDGNVDFTQFEYELD 277 (279)
Q Consensus 234 De~~~R~~l~q~e~~W~~l~~~ip~iQe~~~~~~~~~~~~~~~~ 277 (279)
+....++.+..|.++|..|..-.-.....|..+.++-||-.+.+
T Consensus 81 ~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF~~da~ 124 (283)
T 3pe0_A 81 ARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVR 124 (283)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788999999999999999998888888888888888865543
No 45
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=83.12 E-value=3.2 Score=44.12 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=76.8
Q ss_pred HHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCcccc-hhhHHHHHHHHHHHHHhhhhhhHHHH-HHHhh
Q psy11911 47 ILDKAAIRSQQMALAASKWISLDQNLHEEAAWLNIVQQRVPNLSAMT-CSDYKQYESLFKALDEDMKVHLVRTT-QLVSV 124 (279)
Q Consensus 47 iL~~A~~Rg~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~~iP~v~lVt-eerl~erIslYQ~l~~~l~~hq~kL~-Q~l~~ 124 (279)
.|..+-.|-..|+.++ ..|.....+...|+...++.+-+..... -......+...+.+..+|..|..++. ++.+.
T Consensus 873 ~L~~el~Rqe~L~~L~---qkF~rka~~~e~Wl~ek~~~l~s~d~g~dL~~Vqal~KKhea~e~dl~a~e~ri~~~l~~~ 949 (1010)
T 1g8x_A 873 ALRIELKRQKKIAVLL---QKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSI 949 (1010)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHTHHHHSSCCSCCSTTTTGGGTTSHHHHTTTTTHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444434444333 3567788889999998888776643321 22333445567899999999999998 89899
Q ss_pred hhhhhhc--ccCCCchHHhhHHH-HHHHhhhHHHhhHhHhHH
Q psy11911 125 CRSITNL--IDCPHLEPATESHR-FEILNLERSISSGLIKLS 163 (279)
Q Consensus 125 gk~L~~~--V~cp~LE~q~~~l~-e~wl~l~~kV~~eL~RL~ 163 (279)
|..|... ...+.+-....++. ++|-+|.+.....-++|+
T Consensus 950 a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le 991 (1010)
T 1g8x_A 950 LAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLL 991 (1010)
T ss_dssp HHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTT
T ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988765 44455556666775 688888887776666654
No 46
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=82.99 E-value=7.2 Score=32.25 Aligned_cols=92 Identities=17% Similarity=0.327 Sum_probs=57.8
Q ss_pred HhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc---cchhHHHHHHHHhh-hhhhhhhhhhhHHH---------
Q psy11911 158 GLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS---NNMKSYWELKAQIE-FYNTLLDRSRDNFE--------- 224 (279)
Q Consensus 158 eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp---d~l~~F~Efskeve-~ksslk~s~~~~~~--------- 224 (279)
.+.||+++-.--..|-+-++-...||..|...|.. | +.|..-=.+.+.+| .+++| ..+..-++
T Consensus 3 ~~~~le~id~L~leFAKrAa~fNnW~e~A~EdL~D---~~~v~sleEI~~L~~~He~F~~~L-~~a~~e~~~i~~i~~el 78 (129)
T 1wlx_A 3 TEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQD---MFIVHTIEEIEGLISAHDQFKSTL-PDADREREAILAIHKEA 78 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---CCCCCSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHhcc---chhhccHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999973 5 44443333333333 22222 12222222
Q ss_pred -h---hhcc-----cCcchHHHHHHHHHhHHHHHHHHHhhhhh
Q psy11911 225 -N---AMRV-----FPVSDEVLQRQLYGQLEDRWNKLVSCVTE 258 (279)
Q Consensus 225 -q---aL~~-----~~i~De~~~R~~l~q~e~~W~~l~~~ip~ 258 (279)
+ ...+ -|..+= ....|+++|..|..-||.
T Consensus 79 ~~~~~~~~~~~~~~npYT~i-----t~~~l~~~W~~l~~li~~ 116 (129)
T 1wlx_A 79 QRIAESNHIKLSGSNPYTTV-----TPQIINSKWEKVQQLVPK 116 (129)
T ss_dssp HHHHHHSCCCCSSSCSSCCC-----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCCCCCCccc-----hHHHHHHHHHHHHHHHHH
Confidence 1 1121 033211 156789999999998885
No 47
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=62.81 E-value=4.4 Score=42.92 Aligned_cols=127 Identities=9% Similarity=0.127 Sum_probs=80.6
Q ss_pred HhhHHHHHHHhhhHH-------HhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHH
Q psy11911 140 ATESHRFEILNLERS-------ISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWEL 205 (279)
Q Consensus 140 q~~~l~e~wl~l~~k-------V~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Ef 205 (279)
..+.+...|-.|... +..++.|++.+-.--.+|.+.+++.+.||...+..|.+-..+ .-+...=.|
T Consensus 844 ~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d~g~dl~~vqallkKhea~ 923 (995)
T 2ycu_A 844 TPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAF 923 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 366777788877553 346777777766566899999999999999999998762222 344566667
Q ss_pred HHHhhhhhhh-hhhhhhHHHhhhcccCcchHHHHHHHHHhH-HHHHHHHHhhhhhhccCCcccc
Q psy11911 206 KAQIEFYNTL-LDRSRDNFENAMRVFPVSDEVLQRQLYGQL-EDRWNKLVSCVTEQNPSFDGNV 267 (279)
Q Consensus 206 skeve~kssl-k~s~~~~~~qaL~~~~i~De~~~R~~l~q~-e~~W~~l~~~ip~iQe~~~~~~ 267 (279)
.+++..+..- ....+...+++.. -.--|....++-...| +++|..|.+....=..+|....
T Consensus 924 e~dl~a~e~ri~~~l~~~a~~L~~-~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~ 986 (995)
T 2ycu_A 924 DGECQSLEGQSNSDLLSILAQLTE-LNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAEL 986 (995)
T ss_dssp HHHHHHTTTCSCSSHHHHHHHHTT-THHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766533 3233333332223 2234666667778898 8999999887766655555443
No 48
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=55.58 E-value=85 Score=25.75 Aligned_cols=96 Identities=4% Similarity=0.078 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc-----------c
Q psy11911 66 ISLDQNLHEEAAWLNIVQQRVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI-----------D 133 (279)
Q Consensus 66 ~~Ld~~~~~~~~wLe~~e~~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V-----------~ 133 (279)
-.|-+.-..++-|++-++--+-|--.| |-+.+...++-+...+.++..++...-++...+..|...+ .
T Consensus 15 leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~~~~~~~~np 94 (129)
T 1wlx_A 15 LEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNP 94 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSSCS
T ss_pred HHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 344455566788999988877766666 7889999999999999999999999999988888887654 1
Q ss_pred CCCchHHhhHHHHHHHhhhHHHhhHhHhHH
Q psy11911 134 CPHLEPATESHRFEILNLERSISSGLIKLS 163 (279)
Q Consensus 134 cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~ 163 (279)
+..+= ...+...|-.+..-|...=..|.
T Consensus 95 YT~it--~~~l~~~W~~l~~li~~Rd~~Lq 122 (129)
T 1wlx_A 95 YTTVT--PQIINSKWEKVQQLVPKRDHALL 122 (129)
T ss_dssp SCCCC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cccch--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221 56677788888887765444443
No 49
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=51.83 E-value=16 Score=32.31 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=35.4
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHhhhccccCc-------cchhHHHHHHH
Q psy11911 166 TEYWLEYQTLADRLESWMDAHQNQIESLNKS-------NNMKSYWELKA 207 (279)
Q Consensus 166 lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vp-------d~l~~F~Efsk 207 (279)
-+-|..|.+.+++|..|++.....|+.=++| ..+.+|-.|+.
T Consensus 10 e~~~~eYe~~as~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~ 58 (235)
T 2odv_A 10 QLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKE 58 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999987778 55678888875
No 50
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=45.35 E-value=8.3 Score=40.90 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhhhhhHHHH-HHHhhhhhhhhc--ccCCCchHHhhHH-HHHHHhhhHHHhhHhHhHHHHHH
Q psy11911 100 YESLFKALDEDMKVHLVRTT-QLVSVCRSITNL--IDCPHLEPATESH-RFEILNLERSISSGLIKLSTFTE 167 (279)
Q Consensus 100 rIslYQ~l~~~l~~hq~kL~-Q~l~~gk~L~~~--V~cp~LE~q~~~l-~e~wl~l~~kV~~eL~RL~~~lk 167 (279)
.+.-.+.+.++|..|..++. ++.+.|..|... -..|.+......+ .++|-+|.+.....-.+|+.-++
T Consensus 916 llkKhea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~ 987 (995)
T 2ycu_A 916 KLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELE 987 (995)
T ss_dssp HHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678889999999999987 888888888653 3457788888888 58999998887766666654433
No 51
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=41.04 E-value=74 Score=24.55 Aligned_cols=69 Identities=16% Similarity=0.138 Sum_probs=52.7
Q ss_pred HHHHHHHHH---hHHHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhh
Q psy11911 55 SQQMALAAS---KWISLDQNLHEEAAWLNIVQQRVPNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSI 128 (279)
Q Consensus 55 g~~Le~~ls---~W~~Ld~~~~~~~~wLe~~e~~iP~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L 128 (279)
|+.|+.-+. -....|++|+.+...+...-.++|..+. -.+|-.....+...+++=.--|.|+--+++.+
T Consensus 4 ~~~~~~~~~mSelFe~YE~df~~l~~~i~~kl~~i~~~~~-----~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~ 75 (102)
T 2qyw_A 4 GIHMAASAASSEHFEKLHEIFRGLLEDLQGVPERLLGTAG-----TEEKKKLVRDFDEKQQEANETLAEMEEELRYA 75 (102)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555655554 5778899999999999988888876632 15778888899999999888888888888776
No 52
>1ax8_A Obesity protein, leptin; helical cytokine, hematopoietic factor, diabetes, C; 2.40A {Homo sapiens} SCOP: a.26.1.1
Probab=26.51 E-value=51 Score=27.86 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=52.4
Q ss_pred cCCCCccc-chhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhh-------hcccCCCchHHhhHHHHHHHhhhHHHh
Q psy11911 85 RVPNLSAM-TCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSIT-------NLIDCPHLEPATESHRFEILNLERSIS 156 (279)
Q Consensus 85 ~iP~v~lV-teerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~-------~~V~cp~LE~q~~~l~e~wl~l~~kV~ 156 (279)
-||...-+ +-...++..+.||.|-.++.-. -+-|+.++--.|. .+-+||-.+..-.+..+-|....+.--
T Consensus 41 fiP~~~pi~gLssm~~TL~~yQ~iL~sLp~~--~v~QI~~DlsnLr~lL~~l~~s~~C~~~~~~~~~~l~~l~~~~~~~~ 118 (146)
T 1ax8_A 41 FIPGLHPILTLSKMDQTLAVYQQILTSMPSR--NVIQISNDLENLRDLLHVLAFSKSCHLPEASGLETLDSLGGVLEASG 118 (146)
T ss_dssp SCCCSSCCSSHHHHHHHHHHHHHHHHTSCCH--HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCGGGGHHHHCBTT
T ss_pred cCcCCCccccHHHHHHHHHHHHHHHhcCCcc--cHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCcchhHHHHHHHHHcc
Confidence 57887777 4888999999999997666432 2445555544333 346999888776665555554322211
Q ss_pred -----hHhHhHHHHHHH
Q psy11911 157 -----SGLIKLSTFTEY 168 (279)
Q Consensus 157 -----~eL~RL~~~lkh 168 (279)
-.|-||..|++-
T Consensus 119 ~s~~~vAL~RLk~~L~~ 135 (146)
T 1ax8_A 119 YSTEVVALSRLQGSLQD 135 (146)
T ss_dssp BCHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHH
Confidence 356777777654
No 53
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=23.54 E-value=2.3e+02 Score=22.78 Aligned_cols=62 Identities=5% Similarity=0.134 Sum_probs=43.1
Q ss_pred HHHHHHHHH-------HHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc
Q psy11911 67 SLDQNLHEE-------AAWLNIVQQRVPNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI 132 (279)
Q Consensus 67 ~Ld~~~~~~-------~~wLe~~e~~iP~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V 132 (279)
.|.....++ .++.+.+-.++|.++ ++++.=.+||.-. ..-+.+--..+.+++..|..|+.-|
T Consensus 54 ~f~~~~~ela~dli~k~kqIe~LIdsLP~~~-~see~Q~~ri~~L---~~E~~~~~~el~~~v~e~e~ll~~v 122 (132)
T 1ykh_B 54 EFSNTIDELSTDIILKTRQINKLIDSLPGVD-VSAEEQLRKIDML---QKKLVEVEDEKIEAIKKKEKLMRHV 122 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTT-CCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555 589999999999777 5666666777544 4555555667788888888777544
No 54
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=23.38 E-value=2.3e+02 Score=23.54 Aligned_cols=62 Identities=5% Similarity=0.130 Sum_probs=42.9
Q ss_pred HHHHHHHHH-------HHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcc
Q psy11911 67 SLDQNLHEE-------AAWLNIVQQRVPNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLI 132 (279)
Q Consensus 67 ~Ld~~~~~~-------~~wLe~~e~~iP~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V 132 (279)
.|.....++ .++.+.+-.++|.++ ++++.=.+||.-. ..-+.+--..+.+++.+|..|+.-|
T Consensus 54 ~f~~~~~ela~dli~kakqIe~LIdsLPg~~-~seeeQ~~ri~~L---e~E~~~~~~el~~~v~eae~ll~~v 122 (151)
T 1yke_B 54 EFSNTIDELSTDIILKTRQINKLIDSLPGVD-VSAEEQLRKIDML---QKKLVEVEDEKIEAIKKKEKLLRHV 122 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS-SCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555 589999999999777 5666666777544 4455555667777888887776543
No 55
>2oez_A UPF0289 protein VP2528; immunoglobulin fold, alpha-structure, structural genomics, P protein structure initiative; HET: MSE; 1.97A {Vibrio parahaemolyticus} SCOP: e.68.1.1
Probab=23.04 E-value=3.6e+02 Score=24.20 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=52.2
Q ss_pred hhHHHhhHhHhHHHHHHHHHHHHhhHhHHHHHHHHHHhhhccccCccchhHHHHHHHHhhhhhhh-hh-hhhhHHHhhhc
Q psy11911 151 LERSISSGLIKLSTFTEYWLEYQTLADRLESWMDAHQNQIESLNKSNNMKSYWELKAQIEFYNTL-LD-RSRDNFENAMR 228 (279)
Q Consensus 151 l~~kV~~eL~RL~~~lkhW~~Y~~~s~~L~~WL~sA~~~L~~l~vpd~l~~F~Efskeve~kssl-k~-s~~~~~~qaL~ 228 (279)
+++||...| |||.+.+....+-...+...+ ..|- ..+-...|+-...|.|+-+ |+ +--.+-.++++
T Consensus 12 LNEriRt~L-RLE~Lf~ql~~~~~~~~~~~~--~~a~---------~~Lfelldv~~R~dlK~eLlKeLERq~~~L~~~~ 79 (247)
T 2oez_A 12 LNEKTRIYL-RVESLLRQAHLASGFADNHQY--QLFF---------RALFDMVEIFEQIQLKSELAKDLEKQRLSYRHWL 79 (247)
T ss_dssp SSHHHHHHH-HHHHHHHHHHHHTTCCSTTHH--HHHH---------HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHH-HHHHHHHHHHHHhcCCCHHHH--HHHH---------HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 466777666 566666554444322222211 1111 1233445566666666633 33 33333345666
Q ss_pred ccCcchHHHHHHHHHhHHHHHHHHHh
Q psy11911 229 VFPVSDEVLQRQLYGQLEDRWNKLVS 254 (279)
Q Consensus 229 ~~~i~De~~~R~~l~q~e~~W~~l~~ 254 (279)
-.|-+|+..+.+.+.+++..=..|.+
T Consensus 80 ~~P~Vd~~~l~~~l~~l~~~~~~L~~ 105 (247)
T 2oez_A 80 NVEGVDQEALNSLLNEIDVVHSQLMG 105 (247)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 69999999999999999876555543
No 56
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=21.32 E-value=1.9e+02 Score=23.54 Aligned_cols=69 Identities=9% Similarity=0.132 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhcccCC---CchHHhhHHHHHHHhhhHHHhhHhHhHHHH
Q psy11911 97 YKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLIDCP---HLEPATESHRFEILNLERSISSGLIKLSTF 165 (279)
Q Consensus 97 l~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~cp---~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~ 165 (279)
+.+.....+.|+.+|..-...+-++-.--++++...+.+ .++.++..+-..+..+-+++...|.+|...
T Consensus 4 ~~~f~~~~~~i~~~i~~i~~~v~~L~~l~~~~l~~~~~~~~~~~~~~i~~l~~~i~~~~~~~~~~lk~l~~~ 75 (196)
T 1fio_A 4 FVGFMNKISQINRDLDKYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSAQRD 75 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445555666666666655555544444434433333222 467778888888888888888888777753
No 57
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.86 E-value=1.4e+02 Score=23.67 Aligned_cols=61 Identities=13% Similarity=0.219 Sum_probs=38.2
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhhhhhhh----hcccCCCchHHhhHHHHHHHhhhHHHhhHhHhHHHH
Q psy11911 101 ESLFKALDEDMKVHLVRTTQLVSVCRSIT----NLIDCPHLEPATESHRFEILNLERSISSGLIKLSTF 165 (279)
Q Consensus 101 IslYQ~l~~~l~~hq~kL~Q~l~~gk~L~----~~V~cp~LE~q~~~l~e~wl~l~~kV~~eL~RL~~~ 165 (279)
.++++.|.+.| -++.+-+..=++++ +.=.||+|-.++..+.+..-.+=++++..|++|.++
T Consensus 13 ~~l~~~is~~I----~~In~~vs~l~r~v~~LGT~kDt~~LR~kl~~~~~~t~~l~k~ts~~lk~L~~~ 77 (130)
T 2dnx_A 13 SSIIQTCSGNI----QRISQATAQIKNLMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSL 77 (130)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34555555444 33333333333333 333577888888888888888888888888887775
No 58
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=20.53 E-value=2.1e+02 Score=26.81 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=38.7
Q ss_pred hcCCCCcccchhhHHHHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhccc-----------CCCchHHhhHHHHHHHhhh
Q psy11911 84 QRVPNLSAMTCSDYKQYESLFKALDEDMKVHLVRTTQLVSVCRSITNLID-----------CPHLEPATESHRFEILNLE 152 (279)
Q Consensus 84 ~~iP~v~lVteerl~erIslYQ~l~~~l~~hq~kL~Q~l~~gk~L~~~V~-----------cp~LE~q~~~l~e~wl~l~ 152 (279)
|++|.+-+.-...=..||...+.-...+.+-++++-==.....+|...+| .|++|..+.++..+.-.+.
T Consensus 209 Sr~Pe~PlfGraARE~rle~L~~ere~~~e~~a~~afd~qk~qRl~q~~~~fv~~hl~vaF~~dPe~~l~~~~~~~~~~~ 288 (302)
T 3ibp_A 209 SRFPEVPLFGRAARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELE 288 (302)
T ss_dssp EECCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 46677666643333444544444444444544444322223333333333 3999999999887765544
Q ss_pred HH
Q psy11911 153 RS 154 (279)
Q Consensus 153 ~k 154 (279)
..
T Consensus 289 r~ 290 (302)
T 3ibp_A 289 RA 290 (302)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 59
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=20.02 E-value=3.9e+02 Score=22.44 Aligned_cols=30 Identities=17% Similarity=0.173 Sum_probs=25.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q psy11911 55 SQQMALAASKWISLDQNLHEEAAWLNIVQQ 84 (279)
Q Consensus 55 g~~Le~~ls~W~~Ld~~~~~~~~wLe~~e~ 84 (279)
+.+|-.+..+|+.||..+....+.|+....
T Consensus 5 StKLI~Ain~qs~LeD~L~~~R~el~~~~~ 34 (154)
T 2ocy_A 5 STQLIESVDKQSHLEEQLNKSLKTIASQKA 34 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 456778889999999999999999997744
Done!