Diaphorina citri psyllid: psy11918


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MTPNPTNIQRFQVLTVTVQRYFARILMSLMRGPAIEEPTVEVKEVEKSHMRSYPALPPPPDEGGKPLEMFNLDVTKDDTGQYKMVPHESTPIKQTSTEEGVGGREMSQEGEGGEEHRAESEMPDPAVTLADLLGSFPVNYWDKFAKKKVRQKYSETYDFDSISNLLGMEKTSFSSQEEEESSGIISFILRIDWRYQVWKAGVTITDNAFLYSLWYFTFSVMGNFNNFFFAAHLLDVAVGFKTLRTILQSVTHNGKQLVLTVMLLTIIVYIYYLCIPQHCCDQGHK
cccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccccccccccccccEEEcccccccccccEEECccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccHHHEEEEcccEEEEEEEEcEEccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccc
******NIQRFQVLTVTVQRYFARILMSLMRGP**************************************LDVTKDDTGQYKMVPHESTPIKQTSTEEG****EMSQEGEGGE*****SEMPDPAVTLADLLGSFPVNYWDKFAKKKVRQKYSETYDFDSISNLLGM**************GIISFILRIDWRYQVWKAGVTITDNAFLYSLWYFTFSVMGNFNNFFFAAHLLDVAVGFKTLRTILQSVTHNGKQLVLTVMLLTIIVYIYYLCIPQHCC*****
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MTPNPTNIQRFQVLTVTVQRYFARILMSLMRGPAIEEPTVEVKEVEKSHMRSYPALPPPPDEGGKPLEMFNLDVTKDDTGQYKMVPHESTPIKQTSTEEGVGGREMSQEGEGGEEHRAESEMPDPAVTLADLLGSFPVNYWDKFAKKKVRQKYSETYDFDSISNLLGMEKTSFSSQEEEESSGIISFILRIDWRYQVWKAGVTITDNAFLYSLWYFTFSVMGNFNNFFFAAHLLDVAVGFKTLRTILQSVTHNGKQLVLTVMLLTIIVYIYYLCIPQHCCDQGHK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ryanodine receptor 44F Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.confidentQ24498
Ryanodine receptor 2 Calcium channel that mediates the release of Ca(2+) from the sarcoplasmic reticulum into the cytoplasm and thereby plays a key role in triggering cardiac muscle contraction. Aberrant channel activation can lead to cardiac arrhythmia. In cardiac myocytes, calcium release is triggered by increased Ca(2+) levels due to activation of the L-type calcium channel CACNA1C. Required for cellular calcium ion homeostasis. Required for embryonic heart development (By similarity). The calcium channel activity is modulated by formation of heterotetramers with RYR3.confidentP30957
Ryanodine receptor 2 Calcium channel that mediates the release of Ca(2+) from the sarcoplasmic reticulum into the cytoplasm and thereby plays a key role in triggering cardiac muscle contraction. Aberrant channel activation can lead to cardiac arrhythmia. In cardiac myocytes, calcium release is triggered by increased Ca(2+) levels due to activation of the L-type calcium channel CACNA1C. The calcium channel activity is modulated by formation of heterotetramers with RYR3. Required for cellular calcium ion homeostasis. Required for embryonic heart development.confidentE9Q401

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051716 [BP]cellular response to stimulusprobableGO:0008150, GO:0050896, GO:0009987, GO:0044763, GO:0044699
GO:0051592 [BP]response to calcium ionprobableGO:0042221, GO:0050896, GO:0010035, GO:0008150, GO:0010038
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0016529 [CC]sarcoplasmic reticulumprobableGO:0005737, GO:0005783, GO:0043229, GO:0044464, GO:0016528, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0043231
GO:0016021 [CC]integral to membraneprobableGO:0005575, GO:0044425, GO:0016020, GO:0031224
GO:0044432 [CC]endoplasmic reticulum partprobableGO:0005737, GO:0005575, GO:0005783, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0031000 [BP]response to caffeineprobableGO:0009719, GO:0050896, GO:1901698, GO:0010033, GO:0008150, GO:0042221, GO:0043279, GO:0014074, GO:0010243, GO:0014070
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0005219 [MF]ryanodine-sensitive calcium-release channel activityprobableGO:0005261, GO:0005262, GO:0003674, GO:0015085, GO:0015278, GO:0015276, GO:0072509, GO:0022803, GO:0046873, GO:0008324, GO:0005218, GO:0005215, GO:0005216, GO:0005217, GO:0022891, GO:0022890, GO:0022892, GO:0015075, GO:0022857, GO:0015267, GO:0022836, GO:0022834, GO:0022839, GO:0022838
GO:0006816 [BP]calcium ion transportprobableGO:0072511, GO:0006812, GO:0006811, GO:0006810, GO:0008150, GO:0044765, GO:0030001, GO:0070838, GO:0051234, GO:0051179, GO:0044699
GO:0006950 [BP]response to stressprobableGO:0050896, GO:0008150
GO:0046907 [BP]intracellular transportprobableGO:0009987, GO:0006810, GO:0044763, GO:0051649, GO:0008150, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0030017 [CC]sarcomereprobableGO:0005737, GO:0005575, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0030016, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0051480 [BP]cytosolic calcium ion homeostasisprobableGO:0019725, GO:0072507, GO:0072503, GO:0006875, GO:0006874, GO:0050801, GO:0009987, GO:0006873, GO:0048878, GO:0042592, GO:0065007, GO:0044763, GO:0055074, GO:0030003, GO:0055065, GO:0055080, GO:0008150, GO:0055082, GO:0065008, GO:0044699
GO:0042383 [CC]sarcolemmaprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886
GO:0009628 [BP]response to abiotic stimulusprobableGO:0050896, GO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4DXW, chain A
Confidence level:probable
Coverage over the Query: 241-282
View the alignment between query and template
View the model in PyMOL