BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11919
(453 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1L5T|A Chain A, Crystal Structure Of A Domain-Opened Mutant (R121d) Of The
Human Lactoferrin N-Lobe Refined From A Merohedrally-
Twinned Crystal Form.
pdb|1L5T|B Chain B, Crystal Structure Of A Domain-Opened Mutant (R121d) Of The
Human Lactoferrin N-Lobe Refined From A Merohedrally-
Twinned Crystal Form
Length = 332
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 135/305 (44%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 13 QPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 71
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G D++GW P+
Sbjct: 72 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRDTAGWNVPIG 130
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 131 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 189
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 190 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 248
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 249 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 306
Query: 423 VESLP 427
+P
Sbjct: 307 FSRVP 311
>pdb|1VFD|A Chain A, Human Lactoferrin, N-Terminal Lobe Mutant With Arg 121
Replaced By Glu (R121e)
Length = 330
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 135/305 (44%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 13 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 71
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G +++GW P+
Sbjct: 72 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRETAGWNVPIG 130
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 131 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 189
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 190 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 248
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 249 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 306
Query: 423 VESLP 427
+P
Sbjct: 307 FSRVP 311
>pdb|1VFE|A Chain A, Human Lactoferrin, N-terminal Lobe Mutant With Arg 121
Replaced By Ser (r121s)
Length = 333
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 13 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 71
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 72 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRSTAGWNVPIG 130
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 131 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 189
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 190 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 248
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 249 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 306
Query: 423 VESLP 427
+P
Sbjct: 307 FSRVP 311
>pdb|1DSN|A Chain A, D60s N-Terminal Lobe Human Lactoferrin
Length = 333
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 13 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLSGGFIYEAGLAP 71
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 72 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 130
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 131 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 189
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 190 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 248
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 249 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 306
Query: 423 VESLP 427
+P
Sbjct: 307 FSRVP 311
>pdb|1H43|A Chain A, R210e N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 14 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 72
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 73 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 131
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 132 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 190
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 191 FSYSGAFKCLRDGAGDVAFIEESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 249
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 250 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 307
Query: 423 VESLP 427
+P
Sbjct: 308 FSRVP 312
>pdb|2PMS|A Chain A, Crystal Structure Of The Complex Of Human Lactoferrin
N-Lobe And Lactoferrin-Binding Domain Of Pneumococcal
Surface Protein A
pdb|2PMS|B Chain B, Crystal Structure Of The Complex Of Human Lactoferrin
N-Lobe And Lactoferrin-Binding Domain Of Pneumococcal
Surface Protein A
Length = 344
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 14 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 72
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 73 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 131
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 132 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 190
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 191 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 249
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 250 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 307
Query: 423 VESLP 427
+P
Sbjct: 308 FSRVP 312
>pdb|1EH3|A Chain A, R210k N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 14 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 72
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 73 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 131
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 132 TLRPFLDWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 190
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 191 FSYSGAFKCLRDGAGDVAFIKESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 249
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 250 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 307
Query: 423 VESLP 427
+P
Sbjct: 308 FSRVP 312
>pdb|1H45|A Chain A, R210g N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 14 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 72
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 73 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 131
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 132 TLRPFLDWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 190
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 191 FSYSGAFKCLRDGAGDVAFIGESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 249
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 250 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 307
Query: 423 VESLP 427
+P
Sbjct: 308 FSRVP 312
>pdb|1LCF|A Chain A, Crystal Structure Of Copper-And Oxalate-Substituted Human
Lactoferrin At 2.0 Angstroms Resolution
Length = 691
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 127/279 (45%), Gaps = 25/279 (8%)
Query: 168 RNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-PFQCRNL--EKYGNEKD----LLAVAV 217
R+S ++C+ Q NR ++ GG L P++ R + E YG E+ AVAV
Sbjct: 39 RDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV 97
Query: 218 VKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGG 277
VKK Q +L+GLKSCH+G ++GW P+ L P V +FFS
Sbjct: 98 VKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSA- 155
Query: 278 SCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQVKVN 329
SCVPG F++ +CLK G DVAF + V
Sbjct: 156 SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRESTVF 215
Query: 330 EAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAII 389
E + + + DE E LC R PV K DC+L VP H VV + N + D I + +
Sbjct: 216 EDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS--VNGKEDAIWNLLR 272
Query: 390 TAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
A + F K K F+LFGS G+ D+LF + A G +P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVP 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 436 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 485
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 486 DEYFSQ-SCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 544
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 545 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 604 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 636
>pdb|1LFG|A Chain A, Structure Of Diferric Human Lactoferrin
Length = 691
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 127/279 (45%), Gaps = 25/279 (8%)
Query: 168 RNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-PFQCRNL--EKYGNEKD----LLAVAV 217
R+S ++C+ Q NR ++ GG L P++ R + E YG E+ AVAV
Sbjct: 39 RDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV 97
Query: 218 VKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGG 277
VKK Q +L+GLKSCH+G ++GW P+ L P V +FFS
Sbjct: 98 VKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSA- 155
Query: 278 SCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQVKVN 329
SCVPG F++ +CLK G DVAF + V
Sbjct: 156 SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRESTVF 215
Query: 330 EAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAII 389
E + + + DE E LC R PV K DC+L VP H VV + N + D I + +
Sbjct: 216 EDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS--VNGKEDAIWNLLR 272
Query: 390 TAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
A + F K K F+LFGS G+ D+LF + A G +P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVP 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 436 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 485
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 486 DEYFSQ-SCAPGSDPASNLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 544
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 545 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 604 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 636
>pdb|1LFH|A Chain A, Molecular Replacement Solution Of The Structure Of
Apolactoferrin, A Protein Displaying Large-Scale
Conformational Change
Length = 691
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 127/279 (45%), Gaps = 25/279 (8%)
Query: 168 RNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-PFQCRNL--EKYGNEKD----LLAVAV 217
R+S ++C+ Q NR ++ GG L P++ R + E YG E+ AVAV
Sbjct: 39 RDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV 97
Query: 218 VKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGG 277
VKK Q +L+GLKSCH+G ++GW P+ L P V +FFS
Sbjct: 98 VKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSA- 155
Query: 278 SCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQVKVN 329
SCVPG F++ +CLK G DVAF + V
Sbjct: 156 SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRESTVF 215
Query: 330 EAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAII 389
E + + + DE E LC R PV K DC+L VP H VV + N + D I + +
Sbjct: 216 EDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS--VNGKEDAIWNLLR 272
Query: 390 TAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
A + F K K F+LFGS G+ D+LF + A G +P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVP 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 436 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 485
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 486 DEYFSQ-SCAPGSDPRSNLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 544
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 545 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 604 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 636
>pdb|1LCT|A Chain A, Structure Of The Recombinant N-Terminal Lobe Of Human
Lactoferrin At 2.0 Angstroms Resolution
Length = 333
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 127/279 (45%), Gaps = 25/279 (8%)
Query: 168 RNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-PFQCRNL--EKYGNEKD----LLAVAV 217
R+S ++C+ Q NR ++ GG L P++ R + E YG E+ AVAV
Sbjct: 39 RDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV 97
Query: 218 VKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGG 277
VKK Q +L+GLKSCH+G ++GW P+ L P V +FFS
Sbjct: 98 VKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSA- 155
Query: 278 SCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQVKVN 329
SCVPG F++ +CL+ G DVAF + V
Sbjct: 156 SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
Query: 330 EAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAII 389
E + + + DE E LC R PV K DC+L VP H VV + N + D I + +
Sbjct: 216 EDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS--VNGKEDAIWNLLR 272
Query: 390 TAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
A + F K K F+LFGS G+ D+LF + A G +P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVP 311
>pdb|1N76|A Chain A, Crystal Structure Of Human Seminal Lactoferrin At 3.4 A
Resolution
Length = 690
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 12 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 70
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 71 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 129
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 130 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 188
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 189 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 247
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 248 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 305
Query: 423 VESLP 427
+P
Sbjct: 306 FSRVP 310
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 435 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 484
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 485 DEYFSQ-SCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 543
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V N+A + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 544 VKDVTVLQNTDGNNNDAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 602
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 603 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 635
>pdb|2BJJ|X Chain X, Structure Of Recombinant Human Lactoferrin Produced In The
Milk Of Transgenic Cows
Length = 692
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 14 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 72
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 73 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 131
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 132 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 190
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 191 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 249
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 250 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 307
Query: 423 VESLP 427
+P
Sbjct: 308 FSRVP 312
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 437 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 486
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 487 DEYFSQ-SCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 545
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V N+A + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 546 VKDVTVLQNTDGNNNDAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 604
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 605 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 637
>pdb|1CB6|A Chain A, Structure Of Human Apolactoferrin At 2.0 A Resolution.
pdb|1BKA|A Chain A, Oxalate-Substituted Diferric Lactoferrin
Length = 691
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 13 QPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 71
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 72 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 130
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 131 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 189
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 190 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 248
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 249 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 306
Query: 423 VESLP 427
+P
Sbjct: 307 FSRVP 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 436 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 485
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 486 DEYFSQ-SCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 544
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 545 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 604 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 636
>pdb|1B0L|A Chain A, Recombinant Human Diferric Lactoferrin
Length = 691
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 13 QPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 71
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 72 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 130
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 131 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 189
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 190 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 248
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 249 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 306
Query: 423 VESLP 427
+P
Sbjct: 307 FSRVP 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 436 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 485
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 486 DEYFSQ-SCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 544
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 545 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 604 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 636
>pdb|1FCK|A Chain A, Structure Of Diceric Human Lactoferrin
Length = 692
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 127/279 (45%), Gaps = 25/279 (8%)
Query: 168 RNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-PFQCRNL--EKYGNEKD----LLAVAV 217
R+S ++C+ Q NR ++ GG L P++ R + E YG E+ AVAV
Sbjct: 40 RDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV 98
Query: 218 VKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGG 277
VKK Q +L+GLKSCH+G ++GW P+ L P V +FFS
Sbjct: 99 VKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSA- 156
Query: 278 SCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQVKVN 329
SCVPG F++ +CL+ G DVAF + V
Sbjct: 157 SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 216
Query: 330 EAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAII 389
E + + + DE E LC R PV K DC+L VP H VV + N + D I + +
Sbjct: 217 EDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS--VNGKEDAIWNLLR 273
Query: 390 TAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
A + F K K F+LFGS G+ D+LF + A G +P
Sbjct: 274 QAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVP 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 437 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 486
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 487 DEYFSQ-SCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 545
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 546 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 604
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 605 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 637
>pdb|1LFI|A Chain A, Metal Substitution In Transferrins: The Crystal Structure
Of Human Copper-lactoferrin At 2.1 Angstroms Resolution
Length = 691
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 127/279 (45%), Gaps = 25/279 (8%)
Query: 168 RNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-PFQCRNL--EKYGNEKD----LLAVAV 217
R+S ++C+ Q NR ++ GG L P++ R + E YG E+ AVAV
Sbjct: 39 RDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV 97
Query: 218 VKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGG 277
VKK Q +L+GLKSCH+G ++GW P+ L P V +FFS
Sbjct: 98 VKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSA- 155
Query: 278 SCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQVKVN 329
SCVPG F++ +CL+ G DVAF + V
Sbjct: 156 SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
Query: 330 EAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAII 389
E + + + DE E LC R PV K DC+L VP H VV + N + D I + +
Sbjct: 216 EDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS--VNGKEDAIWNLLR 272
Query: 390 TAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
A + F K K F+LFGS G+ D+LF + A G +P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIGFSRVP 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 436 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 485
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 486 DEYFSQ-SCAPGSDPRSNLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 544
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 545 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 604 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 636
>pdb|1H44|A Chain A, R210l N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 14 QPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 72
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 73 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 131
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 132 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 190
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 191 FSYSGAFKCLRDGAGDVAFILESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 249
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
VP H VV + N + D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 250 RVPSHAVVARS--VNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 307
Query: 423 VESLP 427
+P
Sbjct: 308 FSRVP 312
>pdb|1SQY|A Chain A, Structure Of Human Diferric Lactoferrin At 2.5a Resolution
Using Crystals Grown At Ph 6.5
Length = 691
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 126/279 (45%), Gaps = 25/279 (8%)
Query: 168 RNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-PFQCRNL--EKYGNEKD----LLAVAV 217
R+S +C+ Q NR ++ GG L P++ R + E YG E+ AVAV
Sbjct: 39 RDSPTQCI-QAIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAV 97
Query: 218 VKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGG 277
VKK Q +L+GLKSCH+G ++GW P+ L P V +FFS
Sbjct: 98 VKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSA- 155
Query: 278 SCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQVKVN 329
SCVPG F++ +CL+ G DVAF + V
Sbjct: 156 SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
Query: 330 EAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAII 389
E + + + DE E LC R PV K DC+L VP H VV + N + D I + +
Sbjct: 216 EDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS--VNGKEDAIWNLLR 272
Query: 390 TAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
A + F K K F+LFGS G+ D+LF + A G +P
Sbjct: 273 QAQEKFGKDKSPAFQLFGSPSGQKDLLFKDSAIGFSRVP 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV++ + ++G KSCH+ ++GW P+ GL+ N C +
Sbjct: 436 LAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPM------GLLFNQTGSCKF---- 485
Query: 271 EQFFSGGSCVPGXXXXXXXXX-----XXXXXIC---HNITTIFATNTLQCLKMGDADVAF 322
+++FS SC PG C N T +CL DVAF
Sbjct: 486 DEYFSQ-SCAPGRDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF 544
Query: 323 TNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
V V NEA + + K+ + LC G R PV++A C+L + P H VV+
Sbjct: 545 VKDVTVLQNTDGNNNEAWAKDL-KLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603
Query: 375 SKSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
K ++ H S P+ F LF S
Sbjct: 604 DKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQS 636
>pdb|1HSE|A Chain A, H253m N Terminal Lobe Of Human Lactoferrin
Length = 334
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 154 QVDLTDISHWRRS------------SRNSSVKCLYQDYLVNRFGSL---GGAAKSVWL-P 197
Q + T W+R+ R+S ++C+ Q NR ++ GG L P
Sbjct: 13 QPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCI-QAIAENRADAVTLDGGFIYEAGLAP 71
Query: 198 FQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVY 251
++ R + E YG E+ AVAVVKK Q +L+GLKSCH+G ++GW P+
Sbjct: 72 YKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIG 130
Query: 252 HLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--- 308
L P V +FFS SCVPG F++
Sbjct: 131 TLRPFLNWTGPPEPIEAAVARFFSA-SCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPY 189
Query: 309 -----TLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLG 363
+CL+ G DVAF + V E + + + DE E LC R PV K DC+L
Sbjct: 190 FSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHLA 248
Query: 364 VVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
V P M V + S + E D I + + A + F K K F+LFGS G+ D+LF + A G
Sbjct: 249 RV-PSMAVVARSVNGKE-DAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFKDSAIG 306
Query: 423 VESLP 427
+P
Sbjct: 307 FSRVP 311
>pdb|1DTZ|A Chain A, Structure Of Camel Apo-Lactoferrin Demonstrates Its Dual
Role In Sequestering And Transporting Ferric Ions
Simultaneously:crystal Structure Of Camel
Apo-Lactoferrin At 2.6a Resolution.
pdb|1I6Q|A Chain A, Formation Of A Protein Intermediate And Its Trapping By
The Simultaneous Crystallization Process: Crystal
Structure Of An Iron-Saturated Intermediate In The Fe3+
Binding Pathway Of Camel Lactoferrin At 2.7 Resolution
Length = 689
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 197 PFQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPV 250
P++ R + E YG E AVA+ KK + Q L+GLKSCH+G S+GW P+
Sbjct: 71 PYKLRPIAAEVYGTENQPQTHYYAVAIAKKGTNFQ-LNQLQGLKSCHTGLGRSAGWNIPM 129
Query: 251 YHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXX-------XXXXXXXXXICHNITT 303
L P K V +FFS SCVP C +
Sbjct: 130 GLLRPFLDWTGPPEPLQKAVAKFFSA-SCVPCVDGKEYPNLCQLCAGTGENKCACSSQEP 188
Query: 304 IFA-TNTLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNL 362
F + +CL+ G DVAF V E++ + D+ E LC R PV +C+L
Sbjct: 189 YFGYSGAFKCLQDGAGDVAFVKDSTVFESLPAKADR-DQYELLCPNNTRKPVDAFQECHL 247
Query: 363 GVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPAT 421
VP H VV + N + D+I ++ A + F + KP F+LFGS G+ D+LF + A
Sbjct: 248 ARVPSHAVVARS--VNGKEDLIWKLLVKAQEKFGRGKPSAFQLFGSPAGQKDLLFKDSAL 305
Query: 422 GVESLPDQ 429
G+ +P +
Sbjct: 306 GLLRIPKK 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Query: 210 KDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKG 269
K LAVAVV+K + + LRG KSCH+ ++GW P+ L + D C +
Sbjct: 431 KGYLAVAVVRKANDKITWNSLRGKKSCHTAVDRTAGWNIPMGPLFKD----TDSCRF--- 483
Query: 270 VEQFFSGGSCVPGXXXXXX-------XXXXXXXXICHNITTIFA-TNTLQCLKMGDADVA 321
++FFS SC PG + ++ ++ T +CL DVA
Sbjct: 484 -DEFFSQ-SCAPGSDPRSKLCALCAGNEEGQLKCVPNSSERLYGYTGAFRCLAENVGDVA 541
Query: 322 FTNQVKV-----NEAIEEGI--FKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
F V V + E+ K+ + E LC G R PV++A C+L V P H VV+
Sbjct: 542 FVKDVTVLDNTDGKGTEQWAKDLKLGDFELLCLNGTRKPVTEAESCHLPVAPNHAVVS-- 599
Query: 375 SKSNMEIDIIKH 386
ID + H
Sbjct: 600 -----RIDKVAH 606
>pdb|1BLF|A Chain A, Structure Of Diferric Bovine Lactoferrin At 2.8 Angstroms
Resolution
Length = 689
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 115/248 (46%), Gaps = 20/248 (8%)
Query: 197 PFQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPV 250
P++ R + E YG ++ AVAVVKK S Q + L+G KSCH+G S+GW+ P+
Sbjct: 71 PYKLRPVAAEIYGTKESPQTHYYAVAVVKKGSNFQ-LDQLQGRKSCHTGLGRSAGWIIPM 129
Query: 251 YHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXX-------XXXXXXXXICHNITT 303
L + P V +FFS SCVP C +
Sbjct: 130 GILRPYLSWTESLEPLQGAVAKFFSA-SCVPCIDRQAYPNLCQLCKGEGENQCACSSREP 188
Query: 304 IFA-TNTLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNL 362
F + +CL+ G DVAF + V E + E + D+ E LC RAPV +C+L
Sbjct: 189 YFGYSGAFKCLQDGAGDVAFVKETTVFENLPEKADR-DQYELLCLNNSRAPVDAFKECHL 247
Query: 363 GVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPAT 421
VP H VV + + + D+I + A + F K K F+LFGS G+ D+LF + A
Sbjct: 248 AQVPSHAVVARS--VDGKEDLIWKLLSKAQEKFGKNKSRSFQLFGSPPGQRDLLFKDSAL 305
Query: 422 GVESLPDQ 429
G +P +
Sbjct: 306 GFLRIPSK 313
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+ KSCH+ ++GW P+ GLI N C +
Sbjct: 434 LAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPM------GLIVNQTGSCAF---- 483
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXX-------XXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 484 DEFFSQ-SCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 542
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A ++ LC G R PV++A C+L V P H VV+ +
Sbjct: 543 VKNDTVWENTNGESTADWAKNLNREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSD 602
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ +K ++ LF K P+ F LF S
Sbjct: 603 RAAH----VKQVLLHQQALFGKNGKNCPDKFCLFKS 634
>pdb|1D4N|A Chain A, Human Serum Transferrin
Length = 329
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 81 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 133
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 134 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 192
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 193 LKDGAGDVAFVKESTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 250
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 251 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 304
>pdb|1D3K|A Chain A, Human Serum Transferrin
Length = 329
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 81 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 133
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 134 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 192
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 193 LKDGAGDVAFVQHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 250
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 251 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 304
>pdb|1FQF|A Chain A, Crystal Structures Of Mutant (K296a) That Abolish The
Dilysine Interaction In The N-Lobe Of Human Transferrin
Length = 331
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFADSAHGFLKVP 306
>pdb|3V83|A Chain A, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|B Chain B, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|C Chain C, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|D Chain D, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|E Chain E, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|F Chain F, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V8X|B Chain B, The Crystal Structure Of Transferrin Binding Protein A
(Tbpa) From Neisserial Meningitidis Serogroup B In
Complex With Full Length Human Transferrin
Length = 698
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 102 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 154
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 155 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 213
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 214 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 271
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 272 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKD-----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 418 AGKCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 477
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 478 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 528
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 529 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 587
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 588 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSET-- 645
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 646 KDLLFRDDTVCLAKLHDRNT 665
>pdb|1N7W|A Chain A, Crystal Structure Of Human Serum Transferrin, N-Lobe L66w
Mutant
Length = 331
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|1JW1|A Chain A, Crystallization And Structure Determination Of Goat
Lactoferrin At 4.0 Resolution: A New Form Of Packing In
Lactoferrins With A High Solvent Content In Crystals
Length = 689
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 114/250 (45%), Gaps = 24/250 (9%)
Query: 197 PFQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPV 250
P++ R + E YG EK AVAVVKK S + + L+G KSCH G S+GW PV
Sbjct: 71 PYKLRPVAAEIYGTEKSPQTHYYAVAVVKKGSNFK-LDQLQGQKSCHMGLGRSAGWNIPV 129
Query: 251 YHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXX-------XXXXXXXXXICHNITT 303
L P V +FFS SCVP C +
Sbjct: 130 GILRPPLSWTESAEPLQGAVARFFSA-SCVPCVDGKAYPNLCQLCKGVGENKCACSSQEP 188
Query: 304 IFA-TNTLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNL 362
F + +CL+ G DVAF + V E + E + D+ E LC RAPV +C+L
Sbjct: 189 YFGYSGAFKCLQDGAGDVAFVKETTVFENLPEKADR-DQYELLCLNNTRAPVDAFKECHL 247
Query: 363 GVVPPHMVVTS--NSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNP 419
VP H VV + K N+ ++++ A + F K K + F+LFGS G+ D+LF +
Sbjct: 248 AQVPSHAVVARSVDGKENLIWELLRK----AQEKFGKNKSQRFQLFGSPEGRRDLLFKDS 303
Query: 420 ATGVESLPDQ 429
A G +P +
Sbjct: 304 ALGFLRIPSK 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+G KSCH+ ++GW P+ GLI N C +
Sbjct: 434 LAVAVVKKANEGLTWNSLKGKKSCHTAVDRTAGWNIPM------GLIANQTGSCAF---- 483
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXX-------XXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 484 DEFFS-QSCAPGADPKSSLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 542
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A ++ LC G PV++A C L V P H VV+ +
Sbjct: 543 VKNDTVWENTNGESSADWAKNLNREDFRLLCLDGTTKPVTEAQSCYLAVAPNHAVVSRSD 602
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ ++ ++ LF K P+ F LF S
Sbjct: 603 RAAH----VEQVLLHQQALFGKNGKNCPDKFCLFKS 634
>pdb|1SUV|C Chain C, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1SUV|D Chain D, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1A8E|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe
pdb|1A8F|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe
Length = 329
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 81 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 133
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 134 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 192
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 193 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 250
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 251 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 304
>pdb|2HAV|A Chain A, Apo-Human Serum Transferrin (Glycosylated)
pdb|2HAV|B Chain B, Apo-Human Serum Transferrin (Glycosylated)
Length = 676
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 80 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 132
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 133 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 191
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 192 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 249
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 250 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 303
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKD-----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 396 AGKCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 455
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 456 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 506
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 507 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 565
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 566 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSET-- 623
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 624 KDLLFRDDTVCLAKLHDRNT 643
>pdb|1RYO|A Chain A, Human Serum Transferrin, N-Lobe Bound With Oxalate
Length = 327
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXIC--HNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|3QYT|A Chain A, Diferric Bound Human Serum Transferrin
Length = 679
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKD-----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 399 AGKCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 458
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 459 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 509
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 510 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 568
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 569 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSET-- 626
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 627 KDLLFRDDTVCLAKLHDRNT 646
>pdb|4H0W|A Chain A, Bismuth Bound Human Serum Transferrin
Length = 679
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 103/260 (39%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKD-----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N K N +D A+AVVKK + +++L+G KSCH+ ++
Sbjct: 399 AGKCGLVPVLAENYNKSDNCEDTPEAGYFAIAVVKKSASDLTWDNLKGKKSCHTAVGRTA 458
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 459 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 509
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 510 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 568
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 569 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSET-- 626
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 627 KDLLFRDDTVCLAKLHDRNT 646
>pdb|3FGS|A Chain A, Crystal Structure Of G65rK206E DOUBLE MUTANT OF THE N-Lobe
Human Transferrin
Length = 337
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXIC--HNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVEHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|2HAU|A Chain A, Apo-Human Serum Transferrin (Non-Glycosylated)
pdb|2HAU|B Chain B, Apo-Human Serum Transferrin (Non-Glycosylated)
Length = 676
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q + LRG KSCH+G S+GW P+ GL+
Sbjct: 80 EFYGSKEDPQTFYYAVAVVKKDSGFQXNQ-LRGKKSCHTGLGRSAGWNIPI------GLL 132
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 133 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 191
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 192 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 249
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 250 ARSXGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 303
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKD-----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N +K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 396 AGKCGLVPVLAENYDKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 455
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXX---XXXXXIC--H 299
GW P GL+ N + + ++FFS G C PG +C +
Sbjct: 456 GWNIPX------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCXGSGLNLCEPN 506
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 507 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 565
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 566 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSDVTDCSGNFCLFRSET-- 623
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 624 KDLLFRDDTVCLAKLHDRNT 643
>pdb|1OQG|A Chain A, Crystal Structure Of The D63e Mutant Of The N-Lobe Human
Transferrin
Length = 337
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXIC--HNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|3VE1|B Chain B, The 2.9 Angstrom Crystal Structure Of Transferrin Binding
Protein B (Tbpb) From Serogroup B M982 Neisseria
Meningitidis In Complex With Human Transferrin
pdb|3VE1|D Chain D, The 2.9 Angstrom Crystal Structure Of Transferrin Binding
Protein B (Tbpb) From Serogroup B M982 Neisseria
Meningitidis In Complex With Human Transferrin
Length = 679
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 104/260 (40%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKD-----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N +K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 399 AGKCGLVPVLAENYDKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 458
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 459 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 509
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 510 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 568
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 569 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSDVTDCSGNFCLFRSET-- 626
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 627 KDLLFRDDTVCLAKLHDRNT 646
>pdb|1N7X|A Chain A, Human Serum Transferrin, N-Lobe Y45e Mutant
Length = 331
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|2O7U|B Chain B, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|A Chain A, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|C Chain C, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|D Chain D, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|E Chain E, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|F Chain F, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|G Chain G, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|H Chain H, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|I Chain I, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
Length = 337
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXIC--HNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVEHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFEDSAHGFLKVP 306
>pdb|1BP5|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|B Chain B, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|C Chain C, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|D Chain D, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BTJ|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form, Crystal Form 2
pdb|1BTJ|B Chain B, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form, Crystal Form 2
Length = 337
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXIC--HNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|1N84|A Chain A, Human Serum Transferrin, N-Lobe
Length = 331
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|2O84|X Chain X, Crystal Structure Of K206e Mutant Of N-Lobe Human
Transferrin
Length = 337
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXIC--HNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVEHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|3S9L|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 2
pdb|3S9L|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 2
pdb|3S9M|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 1
pdb|3S9M|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 1
pdb|3S9N|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Room Temperature
pdb|3S9N|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Room Temperature
Length = 693
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 97 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 149
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 150 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 208
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 209 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 266
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 267 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 320
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 104/260 (40%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKD-----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N +K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 413 AGKCGLVPVLAENYDKSDNCEDTPEAGFFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 472
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 473 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 523
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 524 NKEGYYGFTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 582
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 583 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSDVTDCSGNFCLFRSET-- 640
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 641 KDLLFRDDTVCLAKLHDRNT 660
>pdb|1OQH|A Chain A, Crystal Structure Of The R124a Mutant Of The N-lobe Human
Transferrin
Length = 337
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGASAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXXIC--HNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|1FQE|A Chain A, Crystal Structures Of Mutant (K206a) That Abolish The
Dilysine Interaction In The N-Lobe Of Human Transferrin
Length = 331
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 111/236 (47%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP H VV
Sbjct: 195 LKDGAGDVAFVAHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|1B3E|A Chain A, Human Serum Transferrin, N-Terminal Lobe, Expressed In
Pichia Pastoris
Length = 330
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 110/236 (46%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 80 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 132
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFSG SC P C + F + +C
Sbjct: 133 YCDLPEPRKPLEKAVANFFSG-SCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 191
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D E LC R PV + DC+L VP H VV
Sbjct: 192 LKDGAGDVAFVKHSTIFENLANKADR-DNYELLCLDNTRKPVDEYKDCHLAQVPSHTVV- 249
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 250 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 303
>pdb|1JQF|A Chain A, Human Transferrin N-Lobe Mutant H249q
Length = 334
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 110/236 (46%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFS GSC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFS-GSCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D+ E LC R PV + DC+L VP VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DQYELLCLDNTRKPVDEYKDCHLAQVPSQTVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|1B1X|A Chain A, Structure Of Diferric Mare Lactoferrin At 2.62a Resolution
pdb|1B7Z|A Chain A, Structure Of Oxalate Substituted Diferric Mare Lactoferrin
From Colostrum
pdb|1B7U|A Chain A, Structure Of Mare Apolactoferrin: The N And C Lobes Are In
The Closed Form
pdb|1QJM|A Chain A, Crystal Structure Of A Complex Of Lactoferrin With A
Lanthanide Ion (Sm3+) At 3.4 Anstrom Resolution
pdb|1I6B|A Chain A, Structure Of Equine Apolactoferrin At 3.2 A Resolution
Using Crystals Grown At 303k
pdb|3CR9|A Chain A, Crystal Structure Of The Complex Of Lactoferrin With 6-
(Hydroxymethyl)oxane-2,3,4,5-Tetrol At 3.49 A Resolution
Length = 689
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 99/225 (44%), Gaps = 14/225 (6%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQF 273
AVAVVKK S Q L+G+KSCH+G S+GW P+ L P K V F
Sbjct: 94 AVAVVKKGSGFQ-LNQLQGVKSCHTGLGRSAGWNIPIGTLRPYLNWTGPPEPLQKAVANF 152
Query: 274 FSGGSCVPGXXXXXX-------XXXXXXXXICHNITTIFA-TNTLQCLKMGDADVAFTNQ 325
FS SCVP C + F + +CL+ G DVAF
Sbjct: 153 FSA-SCVPCADGKQYPNLCRLCAGTEADKCACSSQEPYFGYSGAFKCLENGAGDVAFVKD 211
Query: 326 VKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIK 385
V E + + + D+ E LC R PV +C+L VP H VV + D+I
Sbjct: 212 STVFENLPDEAER-DKYELLCPDNTRKPVDAFKECHLARVPSHAVVARSVDGRE--DLIW 268
Query: 386 HAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLPDQ 429
+ A + F + K F+LFGS G+ D+LF + A G +P Q
Sbjct: 269 KLLHRAQEEFGRNKSSAFQLFGSTPGEQDLLFKDSALGFVRIPSQ 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV+K + L G KSCH+G ++ W P+ GL+ N C +
Sbjct: 434 LAVAVVRKSDADLTWNSLSGKKSCHTGVGRTAAWNIPM------GLLFNQTGSCKF---- 483
Query: 271 EQFFSGGSCVPGXXXXXX-------XXXXXXXXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 484 DKFFSQ-SCAPGADPQSSLCALCVGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDVAF 542
Query: 323 TNQVKV-------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V V N K ++ E LC G R PV++A C+L P H VV+ +
Sbjct: 543 VKDVTVLQNTDGKNSEPWAKDLKQEDFELLCLDGTRKPVAEAESCHLARAPNHAVVSQSD 602
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ +K + D F P F LF S
Sbjct: 603 RAQH----LKKVLFLQQDQFGGNGPDCPGKFCLFKS 634
>pdb|1DTG|A Chain A, Human Transferrin N-Lobe Mutant H249e
Length = 334
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 109/236 (46%), Gaps = 24/236 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG+++D AVAVVKKDS Q LRG KSCH+G S+GW P+ GL+
Sbjct: 83 EFYGSKEDPQTFYYAVAVVKKDSGFQ-MNQLRGKKSCHTGLGRSAGWNIPI------GLL 135
Query: 260 KNDVC----PYYKGVEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQC 312
D+ P K V FFS GSC P C + F + +C
Sbjct: 136 YCDLPEPRKPLEKAVANFFS-GSCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKC 194
Query: 313 LKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVT 372
LK G DVAF + E + + D E LC R PV + DC+L VP VV
Sbjct: 195 LKDGAGDVAFVKHSTIFENLANKADR-DNYELLCLDNTRKPVDEYKDCHLAQVPSETVV- 252
Query: 373 SNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ S E D+I + A + F K K + F+LF S GK D+LF + A G +P
Sbjct: 253 ARSMGGKE-DLIWELLNQAQEHFGKDKSKEFQLFSSPHGK-DLLFKDSAHGFLKVP 306
>pdb|1BIY|A Chain A, Structure Of Diferric Buffalo Lactoferrin
Length = 689
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 112/248 (45%), Gaps = 20/248 (8%)
Query: 197 PFQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPV 250
P++ R + E YG ++ AVAVVKK S Q + L+G SCH+G S+GW P+
Sbjct: 71 PYKLRPVAAEIYGTKESPQTHYYAVAVVKKGSNFQ-LDQLQGRNSCHTGLGRSAGWNIPM 129
Query: 251 YHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXX-------XXXXXXXXICHNITT 303
L + P V +FFS SCVP C
Sbjct: 130 GILRPYLSWTESLEPLQGAVAKFFSA-SCVPCVDRQAYPNLCQLCKGEGENQCACSPREP 188
Query: 304 IFA-TNTLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNL 362
F + +CL+ G DVAF + V E + E + D+ E LC RAPV +C+L
Sbjct: 189 YFGYSGAFKCLQDGAGDVAFVKETTVFENLPEKADR-DQYELLCLNNTRAPVDAFKECHL 247
Query: 363 GVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPAT 421
VP H VV + + + D+I + A + F K K F+LFGS G+ D+LF + A
Sbjct: 248 AQVPSHAVVARS--VDGKEDLIWKLLSKAQEKFGKNKSGSFQLFGSPPGQRDLLFKDSAL 305
Query: 422 GVESLPDQ 429
G +P +
Sbjct: 306 GFLRIPSK 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+G KSCH+ ++GW P+ GLI N C +
Sbjct: 434 LAVAVVKKANEGLTWNSLKGKKSCHTAVDRTAGWNIPM------GLIANQTGSCAF---- 483
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXX-------XXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 484 DEFFS-QSCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 542
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A ++ LC G R PV++A C+L V P H VV+ +
Sbjct: 543 VKNDTVWENTNGESTADWAKNLNREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSLSE 602
Query: 376 KSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
++ ++ H + P+ F LF S
Sbjct: 603 RAAHVEQVLLHQQALFGENGKNCPDKFCLFKS 634
>pdb|1CE2|A Chain A, Structure Of Diferric Buffalo Lactoferrin At 2.5a
Resolution
Length = 689
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 112/248 (45%), Gaps = 20/248 (8%)
Query: 197 PFQCRNL--EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPV 250
P++ R + E YG ++ AVAVVKK S Q + L+G SCH+G S+GW P+
Sbjct: 71 PYKLRPVAAEIYGTKESPQTHYYAVAVVKKGSNFQ-LDQLQGRNSCHTGLGRSAGWNIPM 129
Query: 251 YHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXX-------XXXXXXXXICHNITT 303
L + P V +FFS SCVP C
Sbjct: 130 GILRPYLSWTESLEPLQGAVAKFFSA-SCVPCVDRQAYPNLCQLCKGEGENQCACSPREP 188
Query: 304 IFA-TNTLQCLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNL 362
F + +CL+ G DVAF + V E + E + D+ E LC RAPV +C+L
Sbjct: 189 YFGYSGAFKCLQDGAGDVAFVKETTVFENLPEKADR-DQYELLCLNNTRAPVDAFKECHL 247
Query: 363 GVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPAT 421
VP H VV + + + D+I + A + F K K F+LFGS G+ D+LF + A
Sbjct: 248 AQVPSHAVVARS--VDGKEDLIWKLLSKAQEKFGKNKSGSFQLFGSPPGQRDLLFKDSAL 305
Query: 422 GVESLPDQ 429
G +P +
Sbjct: 306 GFLRIPSK 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+G KSCH+ ++GW P+ GLI N C +
Sbjct: 434 LAVAVVKKANEGLTWNSLKGKKSCHTAVDRTAGWNIPM------GLIANQTGSCAF---- 483
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXX-------XXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 484 DEFFS-QSCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 542
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A ++ LC G R PV++A C+L V P H VV+ +
Sbjct: 543 VKNDTVWENTNGESTADWAKNLNREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSLSE 602
Query: 376 KSNMEIDIIKHAIITAADLFSKKPEIFKLFGS 407
++ ++ H + P+ F LF S
Sbjct: 603 RAAHVEQVLLHQQALFGENGKNCPDKFCLFKS 634
>pdb|3MC2|A Chain A, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|B Chain B, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|C Chain C, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|D Chain D, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
Length = 687
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 107/237 (45%), Gaps = 26/237 (10%)
Query: 204 EKYGNEKD----LLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLI 259
E YG++ D VA+ KK + Q LRG KSCH+G S+GW P+ LL G
Sbjct: 89 EYYGSKDDPKTHYYVVAMAKKGTGFQ-LNQLRGKKSCHTGLGWSAGWYVPLSTLLPSGSR 147
Query: 260 KNDVCPYYKGVEQFFSGGSCVPGXXXXX-------XXXXXXXXXICHNITTIFAT-NTLQ 311
+ FFS SCVP C + F + L+
Sbjct: 148 ET-------AAATFFS-SSCVPCADGKMFPSLCQLCAGKGTDKCACSSREPYFGSWGALK 199
Query: 312 CLKMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVV 371
CL+ G ADV+F + V EA+ + D+ E LC R PV + C L VP H+VV
Sbjct: 200 CLQDGTADVSFVKHLTVFEAMPTKADR-DQYELLCMDNTRRPVEEYEQCYLARVPSHVVV 258
Query: 372 TSNSKSNMEIDIIKHAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ + + D I+ + A + F K K F+LFGS G+ D+LF + A G+ +P
Sbjct: 259 ARS--VDGKEDSIQELLRVAQEHFGKDKSSPFQLFGSPHGE-DLLFTDAAHGLLRVP 312
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 215 VAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGVEQ 272
VAVVKK ++ L+G KSCH+ S GW P+ GLI + C + +
Sbjct: 436 VAVVKKSDVGITWKSLQGKKSCHTAVGTSEGWNVPM------GLIYDQTGSCKF----DA 485
Query: 273 FFSGGSCVPGXXXXXXXXXXXXXXIC---HNITTIFATN----------TLQCLKMGDAD 319
FFS SC PG +C +N + A N L+CL + D
Sbjct: 486 FFS-RSCAPG-----SDPDSPLCALCVGGNNPAHMCAANNAEGYHGSSGALRCL-VEKGD 538
Query: 320 VAFTNQVKV--------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVV 371
VAF V E +G+ K ++ E LC G R PV++A C+L VP V
Sbjct: 539 VAFMKHPTVLQNTDGKNPEPWAKGL-KHEDFELLCLDGTRKPVTEAQSCHLARVPNRAVF 597
Query: 372 TSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGKP-DVLFLNPATGVESLPDQA 430
+ K+ D ++ + +LF + + +F F D+LF + + +L D+
Sbjct: 598 SRKDKA----DFVRRILFNQQELFGRNGFEYMMFQMFESSAKDLLFSDDTECLSNLQDKT 653
Query: 431 T 431
T
Sbjct: 654 T 654
>pdb|1F9B|A Chain A, Melanin Protein Interaction: X-Ray Structure Of The
Complex Of Mare Lactoferrin With Melanin Monomers
Length = 695
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 97/225 (43%), Gaps = 14/225 (6%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQF 273
AVAVVKK S Q L+G+KSCH+G S+GW P+ L P K V F
Sbjct: 100 AVAVVKKGSGFQ-LNQLQGVKSCHTGLGRSAGWNIPIGTLRPYLNWTGPPEPLQKAVANF 158
Query: 274 FSGGSCVPGXXXXX-------XXXXXXXXXICHNITTIFA-TNTLQCLKMGDADVAFTNQ 325
FS SCVP C + F + +CL+ G DVAF
Sbjct: 159 FSA-SCVPCADGKQYPNLCRLCAGTEADKCACSSQEPYFGYSGAFKCLENGAGDVAFVKD 217
Query: 326 VKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIK 385
V E + + + D+ E LC R PV +C+L VP H VV + D+I
Sbjct: 218 STVFENLPDEAER-DKYELLCPDNTRKPVDAFKECHLARVPSHAVVARSVDGRE--DLIW 274
Query: 386 HAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLPDQ 429
+ A + F + K F+LF S + D+LF + A G +P Q
Sbjct: 275 KLLHRAQEEFGRNKSSAFQLFKSTPEEQDLLFKDSALGFVRIPSQ 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVV+K + L G KSCH+G ++ W P+ GL+ N C +
Sbjct: 440 LAVAVVRKSDADLTWNSLSGKKSCHTGVGRTAAWNIPM------GLLFNQTGSCKF---- 489
Query: 271 EQFFSGGSCVPGXXXXXX-------XXXXXXXXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 490 DKFFSQ-SCAPGADPQSSLCALCVGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDVAF 548
Query: 323 TNQVKV-------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V V N K ++ E LC G R PV++A C+L P H VV+ +
Sbjct: 549 VKDVTVLQNTDGKNSEPWAKDLKQEDFELLCLDGTRKPVAEAESCHLARAPNHAVVSQSD 608
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ +K + D F P F LF S
Sbjct: 609 RAQH----LKKVLFLQQDQFGGNGPDCPGKFCLFKS 640
>pdb|1JNF|A Chain A, Rabbit Serum Transferrin At 2.6 A Resolution
Length = 676
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVC----PYYKG 269
AVA+VKK S Q +L+G KSCH+G S+GW P+ GL+ D+ P K
Sbjct: 97 AVALVKKGSNFQ-LNELQGKKSCHTGLGRSAGWNIPI------GLLLCDLPEPRKPLEKA 149
Query: 270 VEQFFSGGSCVPGXXXXX--XXXXXXXXXICHNITTIFA-TNTLQCLKMGDADVAFTNQV 326
V FFS GSCVP C ++ F + +CLK G DVAF Q
Sbjct: 150 VASFFS-GSCVPCADGADFPQLCQLCPGCGCSSVQPYFGYSGAFKCLKDGLGDVAFVKQE 208
Query: 327 KVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKH 386
+ E + + D+ E LC R PV + C+L VP H VV + D+I
Sbjct: 209 TIFENLPSKDER-DQYELLCLDNTRKPVDEYEQCHLARVPSHAVVARSVDGKE--DLIWE 265
Query: 387 AIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ A + F K K F+LF S GK ++LF + A G +P
Sbjct: 266 LLNQAQEHFGKDKSGDFQLFSSPHGK-NLLFKDSAYGFFKVP 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 205 KYGNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVC 264
K E+ L+VAVVKK + N+ +L G KSCH+ ++GW P+ GL+ N +
Sbjct: 418 KKAPEEGYLSVAVVKKSNPDINWNNLEGKKSCHTAVDRTAGWNIPM------GLLYNRI- 470
Query: 265 PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXX-XIC--HNITTIFA-TNTLQCLKMGDADV 320
+ ++FF G C PG +C +N + T +CL + DV
Sbjct: 471 -NHCRFDEFFRQG-CAPGSQKNSSLCELCVGPSVCAPNNREGYYGYTGAFRCL-VEKGDV 527
Query: 321 AFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
AF V N K ++ E LC G R PVS+A +C+L P H VV+
Sbjct: 528 AFVKSQTVLQNTGGRNSEPWAKDLKEEDFELLCLDGTRKPVSEAHNCHLAKAPNHAVVSR 587
Query: 374 NSKS 377
K+
Sbjct: 588 KDKA 591
>pdb|1H76|A Chain A, The Crystal Structure Of Diferric Porcine Serum
Transferrin
Length = 696
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQF 273
AVAVVKK S Q + L+G +SCH+G S+GW+ P+ L ++ + P K V F
Sbjct: 96 AVAVVKKGSNFQ-WNQLQGKRSCHTGLGRSAGWIIPMGLLYDQ--LPEPRKPIEKAVASF 152
Query: 274 FSGGSCVPGXX-------XXXXXXXXXXXXICHNITTIFA-TNTLQCLKMGDADVAFTNQ 325
FS SCVP C N F CLK DVAF
Sbjct: 153 FSS-SCVPCADPVNFPKLCQQCAGKGAEKCACSNHEPYFGYAGAFNCLKEDAGDVAFVKH 211
Query: 326 VKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIK 385
V E + + + D+ E LC R PV +C L VP H VV + + + D I
Sbjct: 212 STVLENLPDKADR-DQYELLCRDNTRRPVDDYENCYLAQVPSHAVVARS--VDGQEDSIW 268
Query: 386 HAIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATGVESLP 427
+ A + F + K F+LF S GK D+LF + A G +P
Sbjct: 269 ELLNQAQEHFGRDKSPDFQLFSSSHGK-DLLFKDSANGFLKIP 310
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 81/188 (43%), Gaps = 33/188 (17%)
Query: 209 EKDLLAVAVVKKDSKVQ-NFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CP 265
EK LAVAVVKK S N+ +L+G KSCH+ ++GW P+ GL+ N + C
Sbjct: 428 EKGYLAVAVVKKSSGPDLNWNNLKGKKSCHTAVDRTAGWNIPM------GLLYNKINSCK 481
Query: 266 YYKGVEQFFSGGSCVPGXXXXX--------XXXXXXXXXICHNITTIFA-TNTLQCLKMG 316
+ +QFF G C PG + +N + T +CL +
Sbjct: 482 F----DQFF-GEGCAPGSQRNSSLCALCIGSERAPGRECLANNHERYYGYTGAFRCL-VE 535
Query: 317 DADVAFTNQVKVNEAIEEGIFKVD--------EIEFLCSKGGRAPVSKAADCNLGVVPPH 368
DVAF V + +G K D + E LC G R PV A +C+L P H
Sbjct: 536 KGDVAFVKDQVVQQNT-DGKNKDDWAKDLKQMDFELLCQNGAREPVDNAENCHLARAPNH 594
Query: 369 MVVTSNSK 376
VV + K
Sbjct: 595 AVVARDDK 602
>pdb|1TFD|A Chain A, High-Resolution X-Ray Studies On Rabbit Serum Transferrin:
Preliminary Structure Analysis Of The N-Terminal Half-
Molecule At 2.3 Angstroms Resolution
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVC----PYYKG 269
AVA+VKK S Q +L+G KSCH+G S+GW P+ GL+ D+ P K
Sbjct: 97 AVALVKKGSNFQ-LNELQGKKSCHTGLGRSAGWNIPI------GLLYCDLPEPRKPLEKA 149
Query: 270 VEQFFSGGSCVPGXXXXXXXXXXXXXXICHNITT---IFATNTLQCLKMGDADVAFTNQV 326
V FFS GSCVP C ++ + +CLK G DVAF Q
Sbjct: 150 VASFFS-GSCVPCADGADFPQLCQLCPGCGCSSSQPYFGYSGAFKCLKDGLGDVAFVKQE 208
Query: 327 KVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKH 386
+ E + + D+ E LC R PV + C+L VP H VV + + + D+I
Sbjct: 209 TIFENLPSKDER-DQYELLCLDNTRKPVDEYEQCHLARVPSHAVVARS--VDGKEDLIWE 265
Query: 387 AIITAADLFSK-KPEIFKLFGSFMGKPDVLFLNPATG 422
+ A + F K K F+LF S GK ++LF + A G
Sbjct: 266 LLNQAQEHFGKDKSGDFQLFSSPHGK-NLLFKDSAYG 301
>pdb|1NNT|A Chain A, Structural Evidence For A Ph-Sensitive Di-Lysine Trigger
In The Hen Ovotransferrin N-Lobe: Implications For
Transferrin Iron Release
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 207 GNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPY 266
G+ AVAVVKK ++ DL+G SCH+G S+GW P+ LL +G I+
Sbjct: 83 GSTTSYYAVAVVKKGTEF-TVNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIE------ 135
Query: 267 YKGVE---------QFFSGGSCVPGXXXXXXXXXX----XXXXICHNITTIFATNTLQCL 313
++G+E +FFS SCVPG N + CL
Sbjct: 136 WEGIESGSVEQAVAKFFS-ASCVPGATIEQKLCRQCKGDPKTKCARNAPYSGYSGAFHCL 194
Query: 314 KMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
K G DVAF VNE + + DE E LC G R PV CN V H VV
Sbjct: 195 KDGKGDVAFVKHTTVNENAPD---QKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVAR 251
Query: 374 NSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK----PDVLFLNPATGVESLP 427
+ N DI +D F LFG K D+LF + A ++ +P
Sbjct: 252 D--DNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVP 307
>pdb|1IEJ|A Chain A, Ovotransferrin, N-Terminal Lobe, Holo Form, At 1.65 A
Resolution
Length = 332
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 207 GNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPY 266
G+ AVAVVKK ++ DL+G SCH+G S+GW P+ LL +G I+
Sbjct: 87 GSTTSYYAVAVVKKGTEF-TVNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIE------ 139
Query: 267 YKGVE---------QFFSGGSCVPGXXXXXXX----XXXXXXXICHNITTIFATNTLQCL 313
++G+E +FFS SCVPG N + CL
Sbjct: 140 WEGIESGSVEQAVAKFFS-ASCVPGATIEQKLCRQCKGDPKTKCARNAPYSGYSGAFHCL 198
Query: 314 KMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
K G DVAF VNE + + DE E LC G R PV CN V H VV
Sbjct: 199 KDGKGDVAFVKHTTVNENAPD---QKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVAR 255
Query: 374 NSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK----PDVLFLNPATGVESLP 427
+ N DI +D F LFG K D+LF + A ++ +P
Sbjct: 256 D--DNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVP 311
>pdb|1GVC|A Chain A, 18kda N-Ii Domain Fragment Of Duck Ovotransferrin + Nta
Length = 157
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVE-- 271
AVAVVKK + +DLRG SCH+G S+GW P+ L+ +G I+ ++G+E
Sbjct: 4 AVAVVKKGTDFM-IKDLRGKTSCHTGLGRSAGWNIPIGTLIHRGDIE------WEGIESG 56
Query: 272 -------QFFSGGSCVPGXXXXX----XXXXXXXXXICHNITTIFATNTLQCLKMGDADV 320
+FFS SCVPG N + QCLK G DV
Sbjct: 57 SVEQAVAKFFS-ASCVPGATTEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDGKGDV 115
Query: 321 AFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVV 365
AF V E E + DE E LC G R PV CN V
Sbjct: 116 AFVKHTTVQENAPE---EKDEYELLCLDGTRQPVDSYKTCNWARV 157
>pdb|1GV8|A Chain A, 18 Kda Fragment Of N-Ii Domain Of Duck Ovotransferrin
Length = 159
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVE-- 271
AVAVVKK + +DLRG SCH+G S+GW P+ L+ +G I+ ++G+E
Sbjct: 4 AVAVVKKGTDFM-IKDLRGKTSCHTGLGRSAGWNIPIGTLIHRGDIE------WEGIESG 56
Query: 272 -------QFFSGGSCVPGXXXXX----XXXXXXXXXICHNITTIFATNTLQCLKMGDADV 320
+FFS SCVPG N + QCLK G DV
Sbjct: 57 SVEQAVAKFFS-ASCVPGATTEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDGKGDV 115
Query: 321 AFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVV 365
AF V E E + DE E LC G R PV CN V
Sbjct: 116 AFVKHTTVQENAPE---EKDEYELLCLDGTRQPVDSYKTCNWARV 157
>pdb|1N04|A Chain A, Diferric Chicken Serum Transferrin At 2.8 A Resolution.
pdb|1RYX|A Chain A, Crystal Structure Of Hen Serum Transferrin In Apo- Form
pdb|1AIV|A Chain A, Apo Ovotransferrin
pdb|1OVT|A Chain A, Refined Crystallographic Structure Of Hen Ovotransferrin
At 2.4 Angstroms Resolution
Length = 686
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 207 GNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPY 266
G+ AVAVVKK ++ DL+G SCH+G S+GW P+ LL +G I+
Sbjct: 87 GSTTSYYAVAVVKKGTEF-TVNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIE------ 139
Query: 267 YKGVE---------QFFSGGSCVPGXXXXXXXXXX----XXXXICHNITTIFATNTLQCL 313
++G+E +FFS SCVPG N + CL
Sbjct: 140 WEGIESGSVEQAVAKFFS-ASCVPGATIEQKLCRQCKGDPKTKCARNAPYSGYSGAFHCL 198
Query: 314 KMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
K G DVAF VNE + + DE E LC G R PV CN V H VV
Sbjct: 199 KDGKGDVAFVKHTTVNENAPD---QKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVAR 255
Query: 374 NSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK----PDVLFLNPATGVESLP 427
+ N DI +D F LFG K D+LF + A ++ +P
Sbjct: 256 D--DNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVP 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKN--DVCPYYKGV 270
AVAV +KDS V N+ +L+G KSCH+ ++GWV P+ GLI N C +
Sbjct: 432 FAVAVARKDSNV-NWNNLKGKKSCHTAVGRTAGWVIPM------GLIHNRTGTCNF---- 480
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXXXX--------ICHNITTIFA-TNTLQCLKMGDADVA 321
+++FS G C PG + + F T L+CL + DVA
Sbjct: 481 DEYFSEG-CAPGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCL-VEKGDVA 538
Query: 322 FTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
F V N+A ++D+ E LC+ G RA V +CNL VP H VV
Sbjct: 539 FIQHSTVEENTGGKNKADWAKNLQMDDFELLCTDGRRANVMDYRECNLAEVPTHAVVVRP 598
Query: 375 SKSNMEIDIIKH 386
K+N D+++
Sbjct: 599 EKANKIRDLLER 610
>pdb|1NFT|A Chain A, Ovotransferrin, N-Terminal Lobe, Iron Loaded Open Form
pdb|1TFA|A Chain A, Ovotransferrin, N-Terminal Lobe, Apo Form
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 207 GNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPY 266
G+ AVAVVKK ++ DL+G SCH+G S+GW P+ L+ +G I+
Sbjct: 84 GSTTSYYAVAVVKKGTEF-TVNDLQGKTSCHTGLGRSAGWNIPIGTLIHRGAIE------ 136
Query: 267 YKGVE---------QFFSGGSCVPGXXXXXXXXXX----XXXXICHNITTIFATNTLQCL 313
++G+E +FFS SCVPG N + CL
Sbjct: 137 WEGIESGSVEQAVAKFFS-ASCVPGATIEQKLCRQCKGDPKTKCARNAPYSGYSGAFHCL 195
Query: 314 KMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
K G DVAF VNE + + DE E LC G R PV CN V H VV
Sbjct: 196 KDGKGDVAFVKHTTVNENAPD---QKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVAR 252
Query: 374 NSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK----PDVLFLNPATGVESLP 427
+ N DI +D F LFG K D+LF + A ++ +P
Sbjct: 253 D--DNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVP 308
>pdb|2D3I|A Chain A, Crystal Structure Of Aluminum-Bound Ovotransferrin At 2.15
Angstrom Resolution
Length = 686
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 207 GNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPY 266
G+ AVAVVKK ++ DL+G SCH+G S+GW P+ L+ +G I+
Sbjct: 87 GSTTSYYAVAVVKKGTEF-TVNDLQGKTSCHTGLGRSAGWNIPIGTLIHRGAIE------ 139
Query: 267 YKGVE---------QFFSGGSCVPGXXXXXXXXXX----XXXXICHNITTIFATNTLQCL 313
++G+E +FFS SCVPG N + CL
Sbjct: 140 WEGIESGSVEQAVAKFFS-ASCVPGATIEQKLCRQCKGDPKTKCARNAPYSGYSGAFHCL 198
Query: 314 KMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
K G DVAF VNE + + DE E LC G R PV CN V H VV
Sbjct: 199 KDGKGDVAFVKHTTVNENAPD---QKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVAR 255
Query: 374 NSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK----PDVLFLNPATGVESLP 427
+ N DI +D F LFG K D+LF + A ++ +P
Sbjct: 256 D--DNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVP 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKN--DVCPYYKGV 270
AVAV +KDS V N+ +L+G KSCH+ ++GWV P+ GLI N C +
Sbjct: 432 FAVAVARKDSNV-NWNNLKGKKSCHTAVGRTAGWVIPM------GLIHNRTGTCNF---- 480
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXXXX--------ICHNITTIFA-TNTLQCLKMGDADVA 321
+++FS G C PG + + F T L+CL + DVA
Sbjct: 481 DEYFSEG-CAPGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCL-VEKGDVA 538
Query: 322 FTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
F V N+A ++D+ E LC+ G RA V +CNL VP H VV
Sbjct: 539 FIQHSTVEENTGGKNKADWAKNLQMDDFELLCTDGRRANVMDYRECNLAEVPTHAVVVRP 598
Query: 375 SKSNMEIDIIKH 386
K+N D+++
Sbjct: 599 EKANKIRDLLER 610
>pdb|1IQ7|A Chain A, Ovotransferrin, C-Terminal Lobe, Apo Form
Length = 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKN--DVCPYYKGV 270
AVAV +KDS V N+ +L+G KSCH+ ++GWV P+ GLI N C +
Sbjct: 91 FAVAVARKDSNV-NWNNLKGKKSCHTAVGRTAGWVIPM------GLIHNRTGTCNF---- 139
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXXXX--------ICHNITTIFA-TNTLQCLKMGDADVA 321
+++FS G C PG + + F T L+CL + DVA
Sbjct: 140 DEYFSEG-CAPGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCL-VEKGDVA 197
Query: 322 FTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSN 374
F V N+A ++D+ E LC+ G RA V +CNL VP H VV
Sbjct: 198 FIQHSTVEENTGGKNKADWAKNLQMDDFELLCTDGRRANVMDYRECNLAEVPTHAVVVRP 257
Query: 375 SKSNMEIDIIKH 386
K+N D+++
Sbjct: 258 EKANKIRDLLER 269
>pdb|1OVB|A Chain A, The Mechanism Of Iron Uptake By Transferrins: The
Structure Of An 18kd Nii-Domain Fragment At 2.3
Angstroms Resolution
Length = 159
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 70/165 (42%), Gaps = 24/165 (14%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVE-- 271
AVAVVKK + +DLRG SCH+G S+GW P+ L+ + I+ ++G+E
Sbjct: 4 AVAVVKKGTDFM-IKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIE------WEGIESG 56
Query: 272 -------QFFSGGSCVPGXXXXXXXXXX----XXXXICHNITTIFATNTLQCLKMGDADV 320
+FFS SCVPG N + QCLK G DV
Sbjct: 57 SVEQAVAKFFS-ASCVPGATIEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDGKGDV 115
Query: 321 AFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVV 365
AF V E E + DE E LC G R PV CN V
Sbjct: 116 AFVKHTTVQENAPE---EKDEYELLCLDGSRQPVDSYKTCNWARV 157
>pdb|1AOV|A Chain A, Apo Duck Ovotransferrin
pdb|1DOT|A Chain A, Crystallographic Structure Of Duck Ovotransferrin At 2.3
Angstroms Resolution
Length = 686
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 100/239 (41%), Gaps = 30/239 (12%)
Query: 207 GNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPY 266
G+ AVAVVKK + +DLRG SCH+G S+GW P+ L+ + I+
Sbjct: 87 GSTTSYYAVAVVKKGTDFM-IKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIE------ 139
Query: 267 YKGVE---------QFFSGGSCVPGXXXXXXXXXX----XXXXICHNITTIFATNTLQCL 313
++G+E +FFS SCVPG N + QCL
Sbjct: 140 WEGIESGISEQAVAKFFS-ASCVPGATIEQKLCRQCKGDAKTKCLRNGPYSGYSGAFQCL 198
Query: 314 KMGDADVAFTNQVKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
K G DVAF V E E + DE E LC G R PV CN V H VV
Sbjct: 199 KDGKGDVAFVKHTTVQENAPE---EKDEYELLCLDGSRQPVDSYKTCNWARVAAHAVVAR 255
Query: 374 NSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK----PDVLFLNPATGVESLPD 428
+ S ++ DI + A L F LFG K D+LF + A ++ +P+
Sbjct: 256 DD-SKID-DIWSFLGMQAYSLGVDTTSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVPE 312
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 94/226 (41%), Gaps = 42/226 (18%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
AVAVVKK S + + +L+G KSCH+ ++GW P+ GLI N C +
Sbjct: 432 FAVAVVKKSSAI-TWNNLQGKKSCHTAVGRTAGWNIPM------GLIHNKTGSCDF---- 480
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXXXXICHNITTIFA---------TNTLQCLKMGDADVA 321
+ +FS G C PG + + A T L+CL + DVA
Sbjct: 481 DDYFSEG-CAPGSPPNSRLCKLCQGSGENLLEKCVASSHEKYYGYTGALRCL-VEQGDVA 538
Query: 322 FTNQVKVNEAIE--------EGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
F V E + +G+ + D+ E LC+ G RA C+L VP H VV
Sbjct: 539 FIKHSTVGENVSGSNKDDWAKGLTR-DDFELLCTNGKRAKTMDYKTCHLAKVPTHAVVAR 597
Query: 374 NSKSNMEIDIIKHAIITAADLF---SKKPEIFKLFGSFMGKPDVLF 416
K+N I+ + LF + E F +F S D+LF
Sbjct: 598 PEKANK----IRELLEGQEKLFGLHGTEKERFMMFQSQT--KDLLF 637
>pdb|1LGB|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 159
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 214 AVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVCPYYKGVEQF 273
AVAVVKK Q +L+GLKSCH+G ++GW P+ L P V +F
Sbjct: 4 AVAVVKKGGSFQ-LNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARF 62
Query: 274 FSGGSCVPGXXXXXXXXXXXXXXICHNITTIFATN--------TLQCLKMGDADVAFTNQ 325
FS SCVPG F++ +CLK G DVAF +
Sbjct: 63 FS-ASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRE 121
Query: 326 VKVNEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNL 362
V E + + + DE E LC R PV K DC+L
Sbjct: 122 STVFEDLSDEAER-DEYELLCPDNTRKPVDKFKDCHL 157
>pdb|1SUV|E Chain E, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1SUV|F Chain F, Structure Of Human Transferrin Receptor-transferrin
Complex
Length = 345
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 205 KYGNEKDLLAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDVC 264
K E+ L+VAVVKK + N+ +L G KSCH+ ++GW P+ GL+ N +
Sbjct: 87 KKAPEEGYLSVAVVKKSNPDINWNNLEGKKSCHTAVDRTAGWNIPM------GLLYNRI- 139
Query: 265 PYYKGVEQFFSGGSCVPGXXXXXXXXXXXXX-XIC--HNITTIFA-TNTLQCLKMGDADV 320
+ ++FF G C PG +C +N + T +CL + DV
Sbjct: 140 -NHCRFDEFFRQG-CAPGSQKNSSLCELCVGPSVCAPNNREGYYGYTGAFRCL-VEKGDV 196
Query: 321 AFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTS 373
AF V N K ++ E LC G R PVS+A +C+L P H VV+
Sbjct: 197 AFVKSQTVLQNTGGRNSEPWAKDLKEEDFELLCLDGTRKPVSEAHNCHLAKAPNHAVVSR 256
Query: 374 NSKS 377
K+
Sbjct: 257 KDKA 260
>pdb|3SKP|A Chain A, The Structure Of Apo-Human Transferrin C-Lobe With Bound
Sulfate Ions
Length = 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKDL-----LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 62 AGKCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 121
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 122 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 172
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 173 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 231
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 232 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSET-- 289
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 290 KDLLFRDDTVCLAKLHDRNT 309
>pdb|3V89|B Chain B, The Crystal Structure Of Transferrin Binding Protein A
(Tbpa) From Neisseria Meningitidis Serogroup B In
Complex With The C-Lobe Of Human Transferrin
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 30/260 (11%)
Query: 190 AAKSVWLPFQCRNLEKYGNEKDL-----LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSS 244
A K +P N K N +D AVAVVKK + +++L+G KSCH+ ++
Sbjct: 63 AGKCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTA 122
Query: 245 GWVAPVYHLLEKGLIKNDVCPYYKGVEQFFSGGSCVPGXXXXXXXXXXXXXX---IC--H 299
GW P+ GL+ N + + ++FFS G C PG +C +
Sbjct: 123 GWNIPM------GLLYNKI--NHCRFDEFFSEG-CAPGSKKDSSLCKLCMGSGLNLCEPN 173
Query: 300 NITTIFA-TNTLQCLKMGDADVAFTNQVKV-------NEAIEEGIFKVDEIEFLCSKGGR 351
N + T +CL + DVAF V N + E LC G R
Sbjct: 174 NKEGYYGYTGAFRCL-VEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTR 232
Query: 352 APVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKHAIITAADLFSKKPEIFKLFGSFMGK 411
PV + A+C+L P H VVT K I++ + F LF S
Sbjct: 233 KPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSET-- 290
Query: 412 PDVLFLNPATGVESLPDQAT 431
D+LF + + L D+ T
Sbjct: 291 KDLLFRDDTVCLAKLHDRNT 310
>pdb|1NKX|A Chain A, Crystal Structure Of A Proteolytically Generated
Functional Monoferric C-Lobe Of Bovine Lactoferrin At
1.9a Resolution
pdb|2ALU|A Chain A, Detection Of New Binding Site In The C-Terminal Lobe Of
Lactoferrin:crystal Structure Of The Complex Formed
Between Bovine Lactoferrin And A Tetrasaccharide At 2.1a
Resolution
pdb|2AYS|A Chain A, A Conserved Non-Metallic Binding Site In The C-Terminal
Lobe Of Lactoferrin: Structure Of The Complex Of
C-Terminal Lobe Of Bovine Lactoferrin With N-Acetyl
Galactosamine At 1.86 A Resolution
pdb|2Q8J|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Mannitol And Mannose At 2.7 A
Resolution
pdb|2QJE|A Chain A, Crystal Structure Of The Complex Of Bovine C-Lobe With
Amygdalin At 2.3a Resolution
Length = 348
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+ KSCH+ ++GW P+ GLI N C +
Sbjct: 93 LAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPM------GLIVNQTGSCAF---- 142
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXX-------XXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 143 DEFFSQ-SCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 201
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A K ++ LC G R PV++A C+L V P H VV+ +
Sbjct: 202 VKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSD 261
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ ++ ++ LF K P+ F LF S
Sbjct: 262 RAAH----VEQVLLHQQALFGKNGKNCPDKFCLFKS 293
>pdb|2B65|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Maltose At 1.5a Resolution
pdb|2FA7|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoferrin
C-Lobe With A Pentasaccharide At 2.38 A Resolution
pdb|2DOJ|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Adenosine At 2.4 A Resolution
pdb|2DP8|A Chain A, Carbohydrate Recognition By Lactoferrin: Crystal Structure
Of The Complex Of C-Terminal Lobe Of Bovine Lactoferrin
With Trisaccharide At 2.5 A Resolution
pdb|2G93|A Chain A, Ligand Recognition Site In C-Lobe Of Lactoferrin: Crystal
Structure Of The Complex Of C-Lobe Of Bovine Lactoferrin
With Methyl Alpha-D- Mannopyranoside At 1.9 A Resolution
pdb|2H4I|A Chain A, Crystal Structure Of The Complex Of Proteolytically
Produced C- Terminal Half Of Bovine Lactoferrin With
Lactose At 2.55 A Resolution
pdb|2HCA|A Chain A, Crystal Structure Of Bovine Lactoferrin C-Lobe Liganded
With Glucose At 2.8 A Resolution
pdb|2DQV|A Chain A, Structure Of The C-Terminal Lobe Of Bovine Lactoferrin In
Complex With Galactose At 2.7 A Resolution
pdb|2DS9|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Mannose At 2.8 A Resolution
pdb|2DSF|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Xylose At 2.8a Resolution
pdb|2DVC|A Chain A, Structure Of The Bovine Lactoferrin C-Lobe Complex With
Sucrose At 3.0 A Resolution
pdb|2DWA|A Chain A, Structure Of The Complex Of Lactoferrin C-Terminal Half
With Fucose At 2.07 A Resolution
pdb|2DWH|A Chain A, Crystal Structure Of N-Acetylglucosamine Complex Of Bovine
Lactoferrin C-Lobe At 2.8 A Resolution
pdb|2DWI|A Chain A, Crystal Structure Of The Complex Formed Between C-Terminal
Half Of Bovine Lactoferrin And Cellobiose At 2.2 A
Resolution
pdb|2DWJ|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Raffinose At 2.3 A Resolution
pdb|2DXR|A Chain A, Crystal Structure Of The Complex Formed Between C-Terminal
Half Of Bovine Lactoferrin And Sorbitol At 2.85 A
Resolution
pdb|2DXY|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Trehalose At 2.0 A Resolution
pdb|2DYX|A Chain A, Structure Of The Complex Of Lactoferrin C-lobe With
Melibiose At 2.0 A Resolution
pdb|2E0S|A Chain A, Carbohydrate Recognition Of C-Terminal Half Of
Lactoferrin: Crystal Structure Of The Complex Of C-Lobe
With Rhamnose At 2.15 A Resolution
pdb|2E1S|A Chain A, Crystal Structure Of The Complex Of C-Terminal Half Of
Bovine Lactoferrin And Arabinose At 2.7 A Resolution
pdb|2NWJ|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Disaccharide At 1.75 A Resolution
pdb|2NUV|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Atenolol At 2.25 A Resolution
pdb|2O1L|A Chain A, Structure Of A Complex Of C-terminal Lobe Of Bovine
Lactoferrin With Disaccharide At 1.97 A Resolution
pdb|2O51|A Chain A, Crystal Structure Of Bovine C-Lobe With Fructose At 3.0 A
Resolution
pdb|2OCU|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With N-(4-Hydroxyphenyl) Acetamide At 2.38 A
Resolution
pdb|2PX1|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoferrin
C-Lobe With Ribose At 2.5 A Resolution
pdb|2R71|A Chain A, Crystal Structure Of The Complex Of Bovine C-lobe With
Inositol At 2.1a Resolution
pdb|2R9J|A Chain A, Ligand Recognition In C-Lobe: The Crystal Structure Of The
Complex Of Lactoferrin C-Lobe With Nicotinamide At 2.5 A
Resolution
pdb|3CFL|A Chain A, Crystal Structure Of The Complex Formed Between C-lobe Of
Bovine Lactoferrin And
5-chloro-6'-methyl-3-[4-(methylsulfonyl)phenyl]-2,3'-
Bipyridine At 2.25 A Resolution
pdb|3CI8|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Vitamin B3 (Niacin) At 2.4 A Resolution
pdb|3CRB|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With 2- Chromenone At 2.6 A Resolution
pdb|2ZMB|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Parecoxib At 2.9 A Resolution
pdb|3E9X|A Chain A, Crystal Structure Of The Complex Of C-lobe Of Lactoferrin
With Nimesulide At 2.7 A Resolution
pdb|3IB2|A Chain A, Structure Of The Complex Of C-Terminal Half (C-Lobe) Of
Bovine Lactoferrin With Alpha-Methyl-4-(2-Methylpropyl)
Benzene Acetic Acid
pdb|3IAZ|A Chain A, Structural Basis Of The Prevention Of Nsaid-induced Damage
Of The Gastrointestinal Tract By C-terminal Half
(c-lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of The C-lobe Complex
With Aspirin
pdb|3IB0|A Chain A, Structural Basis Of The Prevention Of Nsaid-Induced Damage
Of The Gastrointestinal Tract By C-Terminal Half
(C-Lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of C- Lobe Complex With
Diclofenac
pdb|3IB1|A Chain A, Structural Basis Of The Prevention Of Nsaid-Induced Damage
Of The Gastrointestinal Tract By C-Terminal Half
(C-Lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of C- Lobe Complex With
Indomethacin
pdb|3K0V|A Chain A, Removal Of Sugars And Sugars-Like Molecules From The
Solution By C- Lobe Of Lactoferrin: Crystal Structure Of
The Complex Of C-Lobe With
Beta-D-Glucopyranosyl-(1->4)-Beta-D-Galactopyranosyl-(1-
>4)-Alpha-D- Glucopyranose At 1.9 A Resolution
pdb|3KJ7|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Dextrin At 1.9 A Resolution
pdb|3MJN|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Isopropylamino-3-(1-Naphthyloxy)propan-2-Ol At 2.38
A Resolution
pdb|3O97|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Indole Acetic Acid At 2.68 A Resolution
pdb|3RGY|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lipopolysaccharide At 2.0 A Resolution
pdb|3SDF|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lipoteichoic Acid At 2.1 A Resolution
pdb|3TAJ|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Nabumetone At 1.7a Resolution
pdb|3TTR|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lidocaine At 2.27 A Resolution
pdb|3TUS|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Meta- Hydroxy Benzoic Acid At 2.5 A
Resolution
pdb|4G77|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Tolfenamic Acid At 1.98 A Resolution
pdb|4G8H|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Licofelone At 1.88 A Resolution
Length = 345
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+ KSCH+ ++GW P+ GLI N C +
Sbjct: 93 LAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPM------GLIVNQTGSCAF---- 142
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXX-------XXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 143 DEFFSQ-SCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 201
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A K ++ LC G R PV++A C+L V P H VV+ +
Sbjct: 202 VKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSD 261
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ ++ ++ LF K P+ F LF S
Sbjct: 262 RAAH----VEQVLLHQQALFGKNGKNCPDKFCLFKS 293
>pdb|2P1S|A Chain A, Crystal Structure Of The C-Terminal Lobe Of Bovine
Lactoferrin Complexed With O-Alpha-D-Glucopyranosyl-(1
3)-Alpha-D- Fructofuranosyl- (2 1)-
Alpha-D-Glucopyranoside At 1.93 A Resolution
Length = 344
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+ KSCH+ ++GW P+ GLI N C +
Sbjct: 93 LAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPM------GLIVNQTGSCAF---- 142
Query: 271 EQFFSGGSCVPGXXXXXXXXXXXX-------XXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 143 DEFFSQ-SCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 201
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A K ++ LC G R PV++A C+L V P H VV+ +
Sbjct: 202 VKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSD 261
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ ++ ++ LF K P+ F LF S
Sbjct: 262 RAAH----VEQVLLHQQALFGKNGKNCPDKFCLFKS 293
>pdb|1SDX|A Chain A, Crystal Structure Of The Zinc Saturated C-Terminal Half Of
Bovine Lactoferrin At 2.0 A Resolution Reveals Two
Additional Zinc Binding Sites
pdb|3TOD|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With 1- Butyl-1h-Pyrazole-5-Carboxylic Acid At
1.38 A Resolution
pdb|3U72|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Isoniazid At 2.2 A Resolution
pdb|3U8Q|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Phenyl-Propanolamine At 1.97 A Resolution
pdb|3UGW|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Deoxycytidine At 1.87 A Resolution
pdb|3UK4|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With 1,2, 5-Pentanetriol At 1.98 A Resolution
pdb|3USD|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Imidazol (1,2 A) Pyridine3-Yl-Acitic Acid
At 2.4 A Resolution
pdb|3V5A|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Gamma Amino Butyric Acid At 1.44 A
Resolution
pdb|3VDF|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Diaminopimelic Acid At 1.46 A Resolution
pdb|4DIG|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With N- Acetylmuramyl L-Alanyl D-Isoglutamine
At 1.8 A Resolution
pdb|4DXU|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Aminocaproic Acid At 1.46 A Resolution
pdb|4FIM|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Celecoxib Acid At 1.80 A Resolution
pdb|4FJP|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Naproxen At 1.68 A Resolution
pdb|4FOR|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Flurbiprofen At 1.58 A Resolution
pdb|4G2Z|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Mefenamic Acid At 1.90 A Resolution
pdb|4GRK|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Ketorolac At 1.68 A Resolution
Length = 335
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 213 LAVAVVKKDSKVQNFEDLRGLKSCHSGYMDSSGWVAPVYHLLEKGLIKNDV--CPYYKGV 270
LAVAVVKK ++ + L+ KSCH+ ++GW P+ GLI N C +
Sbjct: 93 LAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPM------GLIVNQTGSCAF---- 142
Query: 271 EQFFSGGSCVPGX-------XXXXXXXXXXXXXICHNITTIFA-TNTLQCLKMGDADVAF 322
++FFS SC PG + ++ + T +CL DVAF
Sbjct: 143 DEFFSQ-SCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAF 201
Query: 323 TNQVKVNE-------AIEEGIFKVDEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNS 375
V E A K ++ LC G R PV++A C+L V P H VV+ +
Sbjct: 202 VKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSD 261
Query: 376 KSNMEIDIIKHAIITAADLFSKK----PEIFKLFGS 407
++ ++ ++ LF K P+ F LF S
Sbjct: 262 RAAH----VEQVLLHQQALFGKNGKNCPDKFCLFKS 293
>pdb|2RDN|A Chain A, Crystal Structure Of Ptlh With Akg And Ent-1pl Bound
pdb|2RDQ|A Chain A, Crystal Structure Of Ptlh With FeALPHA KETOGLUTARATE BOUND
pdb|2RDR|A Chain A, Crystal Structure Of Ptlh With Fe/oxalylglycine Bound
pdb|2RDS|A Chain A, Crystal Structure Of Ptlh With FeOXALYLGLYCINE AND ENT-1-
Deoxypentalenic Acid Bound
Length = 288
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 362 LGVVPPHMVVTSNSKSNME-IDIIKHAIITAADLFSKKPEIFKLFGSFMGKPDVLFLNPA 420
LG PH + + + E +D + D F P K+F G+P +FL +
Sbjct: 59 LGAADPHATLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFL--S 116
Query: 421 TGVESLPDQATDVETNF 437
T + P QA E +F
Sbjct: 117 TTIRYYPSQAGSEEPSF 133
>pdb|4EGW|A Chain A, The Structure Of The Soluble Domain Of Cora From
Methanocaldococcus Jannaschii
pdb|4EGW|B Chain B, The Structure Of The Soluble Domain Of Cora From
Methanocaldococcus Jannaschii
Length = 280
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 101 AGFSSEVSSKVYGLRPTI---YRSILP-KVVLTADWRQYLPVYSNLASCKLRSATHYQVD 156
AG+ EV K+ GLR T+ ++S++ + VL R+YLP+ + + +
Sbjct: 189 AGYDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPITTKEDRENFEDLYYDTLQ 248
Query: 157 LTDISHWRRSSRNS 170
L D+S R S
Sbjct: 249 LIDMSATYREVLTS 262
>pdb|2X8S|A Chain A, Crystal Structure Of The Abn2 D171a Mutant In Complex With
Arabinotriose
pdb|2X8S|B Chain B, Crystal Structure Of The Abn2 D171a Mutant In Complex With
Arabinotriose
Length = 470
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 375 SKSNMEIDIIKHA-IITAADLFSKKPEIFKLFGSFMGKPDVLFLNPATGVESLPDQA 430
S D KH ++ F K +++ ++GS+ G +L +NP TG LP Q
Sbjct: 155 SSDGTPYDATKHPNVVAPHTFFDKDGKLWMVYGSYSGGIFILEMNPKTGF-PLPGQG 210
>pdb|3NKM|A Chain A, Crystal Structure Of Mouse Autotaxin
pdb|3NKN|A Chain A, Crystal Structure Of Mouse Autotaxin In Complex With
14:0-Lpa
pdb|3NKO|A Chain A, Crystal Structure Of Mouse Autotaxin In Complex With
16:0-Lpa
pdb|3NKP|A Chain A, Crystal Structure Of Mouse Autotaxin In Complex With
18:1-Lpa
pdb|3NKQ|A Chain A, Crystal Structure Of Mouse Autotaxin In Complex With
18:3-Lpa
pdb|3NKR|A Chain A, Crystal Structure Of Mouse Autotaxin In Complex With
22:6-Lpa
Length = 831
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 169 NSSVKCLYQDYLVNRFGSLGGAAKSVWLPFQCRNLEKYGNEKDLLAVAVVKKDSKVQNFE 228
+SS + Y +LV + A K VW FQ ++KY +E++ V V+ N+
Sbjct: 647 SSSPEAKYDAFLVTNMVPMYPAFKRVWTYFQRVLVKKYASERN--GVNVISGPIFDYNYN 704
Query: 229 DLRGLKSCHSGYMDSSGWVAPVYH 252
LR ++ Y++ S P ++
Sbjct: 705 GLRDIEDEIKQYVEGSSIPVPTHY 728
>pdb|2XRG|A Chain A, Crystal Structure Of Autotaxin (Enpp2) In Complex With The
Ha155 Boronic Acid Inhibitor
Length = 862
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 169 NSSVKCLYQDYLVNRFGSLGGAAKSVWLPFQCRNLEKYGNEKDLLAVAVVKKDSKVQNFE 228
+SS + Y +LV + A K VW FQ ++KY +E++ V V+ N++
Sbjct: 686 SSSPEAKYDAFLVTNMVPMYPAFKRVWAYFQRVLVKKYASERN--GVNVISGPIFDYNYD 743
Query: 229 DLRGLKSCHSGYMDSSGWVAPVYH 252
LR + Y++ S P ++
Sbjct: 744 GLRDTEDEIKQYVEGSSIPVPTHY 767
>pdb|4EV6|A Chain A, The Complete Structure Of Cora Magnesium Transporter From
Methanocaldococcus Jannaschii
pdb|4EV6|B Chain B, The Complete Structure Of Cora Magnesium Transporter From
Methanocaldococcus Jannaschii
pdb|4EV6|C Chain C, The Complete Structure Of Cora Magnesium Transporter From
Methanocaldococcus Jannaschii
pdb|4EV6|D Chain D, The Complete Structure Of Cora Magnesium Transporter From
Methanocaldococcus Jannaschii
pdb|4EV6|E Chain E, The Complete Structure Of Cora Magnesium Transporter From
Methanocaldococcus Jannaschii
Length = 339
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 101 AGFSSEVSSKVYGLRPTI---YRSILP-KVVLTADWRQYLPVYSNLASCKLRSATHYQVD 156
AG+ EV K+ GLR T+ ++S++ + VL R+YLP+ + + +
Sbjct: 189 AGYDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPITTKEDRENFEDLYYDTLQ 248
Query: 157 LTDISHWRRSSRNS 170
L D+S R S
Sbjct: 249 LIDMSATYREVLTS 262
>pdb|2XR9|A Chain A, Crystal Structure Of Autotaxin (Enpp2)
Length = 827
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 169 NSSVKCLYQDYLVNRFGSLGGAAKSVWLPFQCRNLEKYGNEKDLLAVAVVKKDSKVQNFE 228
+SS + Y +LV + A K VW FQ ++KY +E++ V V+ N++
Sbjct: 651 SSSPEAKYDAFLVTNMVPMYPAFKRVWAYFQRVLVKKYASERN--GVNVISGPIFDYNYD 708
Query: 229 DLRGLKSCHSGYMDSSGWVAPVYH 252
LR + Y++ S P ++
Sbjct: 709 GLRDTEDEIKQYVEGSSIPVPTHY 732
>pdb|1WMX|A Chain A, Crystal Structure Of Family 30 Carbohydrate Binding Module
pdb|1WMX|B Chain B, Crystal Structure Of Family 30 Carbohydrate Binding Module
pdb|1WZX|A Chain A, Crystal Structure Of Family 30 Carbohydrate Binding
Module.
pdb|1WZX|B Chain B, Crystal Structure Of Family 30 Carbohydrate Binding
Module.
pdb|1WZX|C Chain C, Crystal Structure Of Family 30 Carbohydrate Binding
Module.
pdb|1WZX|D Chain D, Crystal Structure Of Family 30 Carbohydrate Binding Module
Length = 205
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 18/77 (23%)
Query: 99 LVAGFSSEVSSKVYGLRPTIYRSILPKVVLTADWRQYLPVYSNLASCKLRSATHYQVDLT 158
V GF +V +VYGL + I V +T DW+ H ++ L
Sbjct: 100 FVIGFRDKVYERVYGLEIDVTTVISNYVTVTTDWQ------------------HVKIPLR 141
Query: 159 DISHWRRSSRNSSVKCL 175
D+ SSV CL
Sbjct: 142 DLMKINNGFDPSSVTCL 158
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
Length = 169
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 340 DEIEFLCSKGGRAPVSKAADCNLGVVPPHMVVTSNSKSNMEIDIIKH-AIITAADLFSKK 398
DE+ L + G AAD N G P H+ S +E+ ++KH A + A+D+F
Sbjct: 28 DEVRILMANGADV---NAAD-NTGTTPLHLAAYSGHLEIVEV-LLKHGADVDASDVFGYT 82
Query: 399 PEIFKLFGSFMGKPDVLFLNPA 420
P + + +VL N A
Sbjct: 83 PLHLAAYWGHLEIVEVLLKNGA 104
>pdb|2C24|A Chain A, Family 30 Carbohydrate-Binding Module Of Cellulosomal
Cellulase Cel9d-Cel44b Of Clostridium Thermocellum
pdb|2C24|B Chain B, Family 30 Carbohydrate-Binding Module Of Cellulosomal
Cellulase Cel9d-Cel44b Of Clostridium Thermocellum
Length = 206
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 18/77 (23%)
Query: 99 LVAGFSSEVSSKVYGLRPTIYRSILPKVVLTADWRQYLPVYSNLASCKLRSATHYQVDLT 158
V GF +V +VYGL + I V +T DW+ H ++ L
Sbjct: 108 FVIGFRDKVYERVYGLEIDVTTVISNYVTVTTDWQ------------------HVKIPLR 149
Query: 159 DISHWRRSSRNSSVKCL 175
D+ SSV CL
Sbjct: 150 DLMKINNGFDPSSVTCL 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,552,775
Number of Sequences: 62578
Number of extensions: 484142
Number of successful extensions: 1302
Number of sequences better than 100.0: 85
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 959
Number of HSP's gapped (non-prelim): 146
length of query: 453
length of database: 14,973,337
effective HSP length: 102
effective length of query: 351
effective length of database: 8,590,381
effective search space: 3015223731
effective search space used: 3015223731
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)