BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1192
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357617562|gb|EHJ70861.1| hypothetical protein KGM_04943 [Danaus plexippus]
Length = 668
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 74/82 (90%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H++LD+RALDALKE+PS+GA++VL QFL+SNLEHVSNKSAFLCG+MKTYRQKSR+G
Sbjct: 49 GKLAHEELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKSRAG 108
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
+ G + +A + +KGPDEEKI+
Sbjct: 109 VQGAPALAAAVQVKGPDEEKIR 130
>gi|195113079|ref|XP_002001097.1| GI10594 [Drosophila mojavensis]
gi|193917691|gb|EDW16558.1| GI10594 [Drosophila mojavensis]
Length = 721
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 72/82 (87%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL+QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 107 GKLAHAELDERALDALKEFPVDGALNVLSQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 166
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GV +T++ + +KGPDEEKIK
Sbjct: 167 QQGVPATASTIQVKGPDEEKIK 188
>gi|195390987|ref|XP_002054147.1| GJ22950 [Drosophila virilis]
gi|194152233|gb|EDW67667.1| GJ22950 [Drosophila virilis]
Length = 789
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 72/82 (87%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL+QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLSQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GV +T++ + +KGPDEEKIK
Sbjct: 111 QQGVPATASSIQVKGPDEEKIK 132
>gi|195055139|ref|XP_001994478.1| GH17270 [Drosophila grimshawi]
gi|193892241|gb|EDV91107.1| GH17270 [Drosophila grimshawi]
Length = 532
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 72/82 (87%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL+QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLSQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GV +T++ + +KGPDE+KIK
Sbjct: 111 QQGVPATASTIQVKGPDEDKIK 132
>gi|194744098|ref|XP_001954532.1| GF16693 [Drosophila ananassae]
gi|190627569|gb|EDV43093.1| GF16693 [Drosophila ananassae]
Length = 710
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 70/82 (85%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GV + +A + +KGPDE+KIK
Sbjct: 111 QQGVPTPAAAVQVKGPDEDKIK 132
>gi|198450702|ref|XP_002137140.1| GA27045, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131152|gb|EDY67698.1| GA27045, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 674
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 69/82 (84%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P EGA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVEGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GV + + + +KGPDE+KIK
Sbjct: 111 QQGVPAPATAVQVKGPDEDKIK 132
>gi|390177341|ref|XP_003736348.1| GA27045, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859003|gb|EIM52421.1| GA27045, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 483
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 69/82 (84%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P EGA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVEGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GV + + + +KGPDE+KIK
Sbjct: 111 QQGVPAPATAVQVKGPDEDKIK 132
>gi|189234965|ref|XP_973687.2| PREDICTED: similar to CG17838 CG17838-PB [Tribolium castaneum]
Length = 905
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 69/82 (84%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFL+SNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 61 GKLAHVDLDERALDALKEFPVDGALNVLGQFLDSNLEHVSNKSAYLCGVMKTYRQKSRAG 120
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
+ +T A +KGPDEEKIK
Sbjct: 121 SSQGTTTPAPAPVKGPDEEKIK 142
>gi|195449649|ref|XP_002072163.1| GK22469 [Drosophila willistoni]
gi|194168248|gb|EDW83149.1| GK22469 [Drosophila willistoni]
Length = 731
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GV + + + +KGPDE+KIK
Sbjct: 111 QQGVPTPAPAVQVKGPDEDKIK 132
>gi|442620163|ref|NP_001262784.1| syncrip, isoform R [Drosophila melanogaster]
gi|440217686|gb|AGB96164.1| syncrip, isoform R [Drosophila melanogaster]
Length = 569
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 111 QQGVAAPA---TVKGPDEDKIK 129
>gi|442620145|ref|NP_001262776.1| syncrip, isoform I [Drosophila melanogaster]
gi|440217677|gb|AGB96156.1| syncrip, isoform I [Drosophila melanogaster]
Length = 603
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 85 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 144
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 145 QQGVAAPA---TVKGPDEDKIK 163
>gi|442620157|ref|NP_001262781.1| syncrip, isoform O [Drosophila melanogaster]
gi|440217683|gb|AGB96161.1| syncrip, isoform O [Drosophila melanogaster]
Length = 611
Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 93 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 152
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 153 QQGVAAPA---TVKGPDEDKIK 171
>gi|270001371|gb|EEZ97818.1| hypothetical protein TcasGA2_TC000185 [Tribolium castaneum]
Length = 638
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 69/82 (84%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFL+SNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 61 GKLAHVDLDERALDALKEFPVDGALNVLGQFLDSNLEHVSNKSAYLCGVMKTYRQKSRAG 120
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
+ +T A +KGPDEEKIK
Sbjct: 121 SSQGTTTPAPAPVKGPDEEKIK 142
>gi|28317322|gb|AAO39657.1| AT01548p, partial [Drosophila melanogaster]
Length = 626
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 12 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 71
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 72 QQGVAAPA---TVKGPDEDKIK 90
>gi|161078444|ref|NP_650913.2| syncrip, isoform B [Drosophila melanogaster]
gi|442620151|ref|NP_001097848.2| syncrip, isoform L [Drosophila melanogaster]
gi|158030316|gb|AAN13835.2| syncrip, isoform B [Drosophila melanogaster]
gi|440217680|gb|ABW08710.2| syncrip, isoform L [Drosophila melanogaster]
Length = 711
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 111 QQGVAAPA---TVKGPDEDKIK 129
>gi|195498304|ref|XP_002096465.1| GE25686 [Drosophila yakuba]
gi|194182566|gb|EDW96177.1| GE25686 [Drosophila yakuba]
Length = 747
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 89 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 148
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ +AV KGPDE+KIK
Sbjct: 149 QQGVAAPAAV---KGPDEDKIK 167
>gi|442620149|ref|NP_001262778.1| syncrip, isoform K [Drosophila melanogaster]
gi|440217679|gb|AGB96158.1| syncrip, isoform K [Drosophila melanogaster]
Length = 753
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 85 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 144
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 145 QQGVAAPA---TVKGPDEDKIK 163
>gi|442620147|ref|NP_001262777.1| syncrip, isoform J [Drosophila melanogaster]
gi|440217678|gb|AGB96157.1| syncrip, isoform J [Drosophila melanogaster]
Length = 761
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 93 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 152
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 153 QQGVAAPA---TVKGPDEDKIK 171
>gi|442620161|ref|NP_001262783.1| syncrip, isoform Q [Drosophila melanogaster]
gi|440217685|gb|AGB96163.1| syncrip, isoform Q [Drosophila melanogaster]
Length = 761
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 93 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 152
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 153 QQGVAAPA---TVKGPDEDKIK 171
>gi|194899678|ref|XP_001979385.1| GG24121 [Drosophila erecta]
gi|190651088|gb|EDV48343.1| GG24121 [Drosophila erecta]
Length = 666
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 56 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 115
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ +AV KGPDE+KIK
Sbjct: 116 QQGVAAPAAV---KGPDEDKIK 134
>gi|161078446|ref|NP_732558.2| syncrip, isoform C [Drosophila melanogaster]
gi|16197897|gb|AAL13706.1| GH28335p [Drosophila melanogaster]
gi|158030317|gb|AAN13833.2| syncrip, isoform C [Drosophila melanogaster]
gi|220945692|gb|ACL85389.1| CG17838-PC [synthetic construct]
gi|220955464|gb|ACL90275.1| CG17838-PC [synthetic construct]
Length = 529
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 111 QQGVAAPA---TVKGPDEDKIK 129
>gi|195353891|ref|XP_002043435.1| GM23135 [Drosophila sechellia]
gi|194127576|gb|EDW49619.1| GM23135 [Drosophila sechellia]
Length = 745
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 93 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 152
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 153 QQGVAAPA---TVKGPDEDKIK 171
>gi|442620155|ref|NP_001262780.1| syncrip, isoform N [Drosophila melanogaster]
gi|442620159|ref|NP_001262782.1| syncrip, isoform P [Drosophila melanogaster]
gi|440217682|gb|AGB96160.1| syncrip, isoform N [Drosophila melanogaster]
gi|440217684|gb|AGB96162.1| syncrip, isoform P [Drosophila melanogaster]
Length = 665
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 111 QQGVAAPA---TVKGPDEDKIK 129
>gi|24648528|ref|NP_732559.1| syncrip, isoform F [Drosophila melanogaster]
gi|23171812|gb|AAN13834.1| syncrip, isoform F [Drosophila melanogaster]
Length = 529
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 51 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 111 QQGVAAPA---TVKGPDEDKIK 129
>gi|442620153|ref|NP_001262779.1| syncrip, isoform M [Drosophila melanogaster]
gi|440217681|gb|AGB96159.1| syncrip, isoform M [Drosophila melanogaster]
Length = 699
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 85 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 144
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 145 QQGVAAPA---TVKGPDEDKIK 163
>gi|45551939|ref|NP_732557.2| syncrip, isoform A [Drosophila melanogaster]
gi|45446567|gb|AAN13832.2| syncrip, isoform A [Drosophila melanogaster]
Length = 563
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 85 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 144
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 145 QQGVAAPA---TVKGPDEDKIK 163
>gi|161078453|ref|NP_001097849.1| syncrip, isoform H [Drosophila melanogaster]
gi|158030319|gb|ABW08711.1| syncrip, isoform H [Drosophila melanogaster]
Length = 534
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 56 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 115
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 116 QQGVAAPA---TVKGPDEDKIK 134
>gi|24648522|ref|NP_732556.1| syncrip, isoform D [Drosophila melanogaster]
gi|23171809|gb|AAF55805.2| syncrip, isoform D [Drosophila melanogaster]
Length = 707
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 93 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 152
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 153 QQGVAAPA---TVKGPDEDKIK 171
>gi|24648520|ref|NP_732555.1| syncrip, isoform E [Drosophila melanogaster]
gi|23171808|gb|AAN13831.1| syncrip, isoform E [Drosophila melanogaster]
Length = 571
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 93 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 152
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 153 QQGVAAPA---TVKGPDEDKIK 171
>gi|157132620|ref|XP_001656100.1| heterogeneous nuclear ribonucleoprotein r [Aedes aegypti]
gi|108881674|gb|EAT45899.1| AAEL002879-PA, partial [Aedes aegypti]
Length = 517
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 69/82 (84%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL+QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 14 GKLAHTELDERALDALKEFPVDGALNVLSQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 73
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G+ + + + KGPDE+KIK
Sbjct: 74 QQGLPTPAITVQAKGPDEDKIK 95
>gi|170034902|ref|XP_001845311.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
gi|167876604|gb|EDS39987.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
Length = 542
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 68/82 (82%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 63 GKLAHSELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAT 122
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G+ + + + KGPDE+KIK
Sbjct: 123 QQGLPTPAITVQAKGPDEDKIK 144
>gi|255069811|gb|ACU00255.1| AT04629p [Drosophila melanogaster]
Length = 489
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+
Sbjct: 121 GKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRAS 180
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
GVA+ + T+KGPDE+KIK
Sbjct: 181 QQGVAAPA---TVKGPDEDKIK 199
>gi|242011880|ref|XP_002426671.1| Heterogeneous nuclear ribonucleoprotein Q, putative [Pediculus
humanus corporis]
gi|212510842|gb|EEB13933.1| Heterogeneous nuclear ribonucleoprotein Q, putative [Pediculus
humanus corporis]
Length = 548
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLDDRALDALKE+ EGA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 62 GKLAHIDLDDRALDALKEFQVEGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 121
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G A T + +K PDEEKIK
Sbjct: 122 TTGSALTGGPI-IKAPDEEKIK 142
>gi|345481380|ref|XP_001602182.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like, partial
[Nasonia vitripennis]
Length = 661
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 68/82 (82%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 51 GKLAHVDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G +TS T K PDE+KIK
Sbjct: 111 Q-GTGNTST--TPKAPDEDKIK 129
>gi|380011709|ref|XP_003689940.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q-like [Apis florea]
Length = 667
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 51 GKLAHVDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST T K PDE+KIK
Sbjct: 111 QGTGTST----TPKAPDEDKIK 128
>gi|321468659|gb|EFX79643.1| hypothetical protein DAPPUDRAFT_319432 [Daphnia pulex]
Length = 695
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 63/97 (64%), Positives = 71/97 (73%), Gaps = 15/97 (15%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSR-- 74
GKL+H +LDDRALDALKE+P +GA +VL QFLESNLEHVSNKSAFLCGIMKTYRQK R
Sbjct: 44 GKLVHSELDDRALDALKEFPVDGAQSVLQQFLESNLEHVSNKSAFLCGIMKTYRQKVRAL 103
Query: 75 ------SGMAGVASTSAVLTL-------KGPDEEKIK 98
+G+ + TSAV T KGPDEEKIK
Sbjct: 104 GSATASAGLGTASGTSAVDTSFDLKPLGKGPDEEKIK 140
>gi|328789990|ref|XP_392307.4| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Apis
mellifera]
Length = 664
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 51 GKLAHVDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST T K PDE+KIK
Sbjct: 111 QGTGTST----TPKAPDEDKIK 128
>gi|307212325|gb|EFN88129.1| Heterogeneous nuclear ribonucleoprotein Q [Harpegnathos saltator]
Length = 649
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 42 GKLAHVDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 101
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST T K PDE+KIK
Sbjct: 102 QGTGTST----TPKAPDEDKIK 119
>gi|307173250|gb|EFN64303.1| Heterogeneous nuclear ribonucleoprotein Q [Camponotus floridanus]
Length = 683
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 48 GKLAHVDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 107
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST T K PDE+KIK
Sbjct: 108 QGTGTST----TPKAPDEDKIK 125
>gi|118794756|ref|XP_321714.3| AGAP001419-PA [Anopheles gambiae str. PEST]
gi|347965857|ref|XP_003435823.1| AGAP001419-PB [Anopheles gambiae str. PEST]
gi|347965859|ref|XP_003435824.1| AGAP001419-PD [Anopheles gambiae str. PEST]
gi|116116446|gb|EAA43192.3| AGAP001419-PA [Anopheles gambiae str. PEST]
gi|333470321|gb|EGK97588.1| AGAP001419-PB [Anopheles gambiae str. PEST]
gi|333470323|gb|EGK97590.1| AGAP001419-PD [Anopheles gambiae str. PEST]
Length = 532
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+ EGA+ VL+QFL+SNLEHVSNKSAFLCG+MKTYRQK R+
Sbjct: 52 GKLAHSELDERALDALKEFHVEGALDVLDQFLDSNLEHVSNKSAFLCGVMKTYRQKVRAT 111
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G + + + KGPDEEKIK
Sbjct: 112 QQGQPAPAVTVQAKGPDEEKIK 133
>gi|347965861|ref|XP_003435825.1| AGAP001419-PC [Anopheles gambiae str. PEST]
gi|333470322|gb|EGK97589.1| AGAP001419-PC [Anopheles gambiae str. PEST]
Length = 532
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 66/82 (80%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H +LD+RALDALKE+ EGA+ VL+QFL+SNLEHVSNKSAFLCG+MKTYRQK R+
Sbjct: 52 GKLAHSELDERALDALKEFHVEGALDVLDQFLDSNLEHVSNKSAFLCGVMKTYRQKVRAT 111
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G + + + KGPDEEKIK
Sbjct: 112 QQGQPAPAVTVQAKGPDEEKIK 133
>gi|332026895|gb|EGI66996.1| Heterogeneous nuclear ribonucleoprotein Q [Acromyrmex echinatior]
Length = 724
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 58/83 (69%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 48 GKLAHIDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 107
Query: 77 MAGVASTSAVLTLKGPDEEKIKF 99
ST T K PDE+KIK
Sbjct: 108 QGTGTST----TPKAPDEDKIKL 126
>gi|350409228|ref|XP_003488661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Bombus
impatiens]
Length = 664
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 51 GKLAHVDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST+ K PDE+KIK
Sbjct: 111 QGTGTSTAP----KAPDEDKIK 128
>gi|322800628|gb|EFZ21595.1| hypothetical protein SINV_12441 [Solenopsis invicta]
Length = 265
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 48 GKLAHIDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 107
Query: 77 MAGVASTSAVLTLKGPDEEKIKF 99
ST T K PDE+KIK
Sbjct: 108 QGTGTST----TPKAPDEDKIKL 126
>gi|340712736|ref|XP_003394911.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Bombus
terrestris]
Length = 270
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+G
Sbjct: 51 GKLAHVDLDERALDALKEFPVDGALNVLTQFLESNLEHVSNKSAYLCGVMKTYRQKSRAG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIKF 99
ST+ K PDE+KIK
Sbjct: 111 QGTGTSTAP----KAPDEDKIKM 129
>gi|391324923|ref|XP_003736991.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Metaseiulus
occidentalis]
Length = 558
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 5/82 (6%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL + DLD+RALDALKE+P EGA+AVL QFL+S+LEHVSNKSAFLCG+MKTYRQKS+
Sbjct: 62 GKLSYSDLDERALDALKEFPQEGALAVLKQFLDSSLEHVSNKSAFLCGVMKTYRQKSK-- 119
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
M V + +AV KGPD++KIK
Sbjct: 120 MPNVTTENAV---KGPDQDKIK 138
>gi|427784529|gb|JAA57716.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily [Rhipicephalus pulchellus]
Length = 608
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 7/83 (8%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSR-S 75
GKL + DLD+RALDALKE+P++GA+AVL QFL+S+LEHVSNKSA+LCG+MKTYRQKS+
Sbjct: 49 GKLAYADLDERALDALKEFPADGALAVLKQFLDSSLEHVSNKSAYLCGVMKTYRQKSKLP 108
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G +G S KGPDEEKI+
Sbjct: 109 GASGSGSN------KGPDEEKIR 125
>gi|225714616|gb|ACO13154.1| Heterogeneous nuclear ribonucleoprotein Q [Lepeophtheirus salmonis]
Length = 261
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 67/93 (72%), Gaps = 11/93 (11%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS- 75
GKL H DLD RALDALKE+ GAIAVLNQF +SNLEHV+NKSA+LCG+MKTYRQKSRS
Sbjct: 70 GKLSHSDLDGRALDALKEFAVPGAIAVLNQFQDSNLEHVTNKSAYLCGVMKTYRQKSRSV 129
Query: 76 GMAGVASTSAV----------LTLKGPDEEKIK 98
+ G S+ A +KGPDE+KIK
Sbjct: 130 AVNGTGSSQASNDVSSNSLNGCLVKGPDEQKIK 162
>gi|241236734|ref|XP_002400928.1| G-3-P dehydrogenase, putative [Ixodes scapularis]
gi|215496107|gb|EEC05748.1| G-3-P dehydrogenase, putative [Ixodes scapularis]
Length = 438
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 69/82 (84%), Gaps = 5/82 (6%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL + DLD+RALDALKE+P++GA+AVL QFL+S+LEHVSNKSA+LCG+MKTYRQKS+
Sbjct: 56 GKLAYADLDERALDALKEFPADGALAVLKQFLDSSLEHVSNKSAYLCGVMKTYRQKSK-- 113
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
+ G + + A KGPDE+KI+
Sbjct: 114 LPGASGSGA---QKGPDEDKIR 132
>gi|383847619|ref|XP_003699450.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Megachile rotundata]
Length = 664
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD RALDALKE+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR G
Sbjct: 51 GKLAHVDLDARALDALKEFPVDGALNVLIQFLESNLEHVSNKSAYLCGVMKTYRQKSRGG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST+ K PDE+KIK
Sbjct: 111 QGTGTSTTP----KAPDEDKIK 128
>gi|225717924|gb|ACO14808.1| Heterogeneous nuclear ribonucleoprotein Q [Caligus clemensi]
Length = 373
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSR-- 74
GKL H DLD RALDALKE+ GAIAVLNQF +SNLEHV+NKSA+LCG+MKTYRQKSR
Sbjct: 117 GKLSHSDLDGRALDALKEFAIPGAIAVLNQFQDSNLEHVTNKSAYLCGVMKTYRQKSRCS 176
Query: 75 ---------------------SGMAGVASTSAVLTLKGPDEEKIK 98
S + +A KGPDE+KIK
Sbjct: 177 LGVNGSPSGSGSSSQVVLSASSNSGSINGGNAPAVGKGPDEKKIK 221
>gi|111494085|gb|AAI10390.1| HNRPR protein [Homo sapiens]
Length = 607
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 26 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 85
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 86 GSKVQEST------KGPDEAKIK 102
>gi|34365228|emb|CAE45953.1| hypothetical protein [Homo sapiens]
Length = 613
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 29 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 88
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 89 GSKVQEST------KGPDEAKIK 105
>gi|193683845|ref|XP_001950620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Acyrthosiphon pisum]
Length = 533
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD RALDALKE+P + A+ VL+QFL+SNL HVSNKSA+LCG+MKTYRQK+R
Sbjct: 48 GKLAHSDLDTRALDALKEFPVDAALGVLSQFLDSNLLHVSNKSAYLCGVMKTYRQKTRI- 106
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
V KGP+ +K+K
Sbjct: 107 ---TPQEPFVQPPKGPEFDKVK 125
>gi|301608798|ref|XP_002933974.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Xenopus
(Silurana) tropicalis]
Length = 770
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 10/95 (10%)
Query: 4 ENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLC 63
E + I++S G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLC
Sbjct: 188 EKLDEIYIS----GLVTHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLC 243
Query: 64 GIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
G+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 244 GVMKTYRQREKQGTK-VADSS-----KGPDESKIK 272
>gi|397478941|ref|XP_003810792.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1 [Pan
paniscus]
Length = 616
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 35 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 94
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 95 GSKVQEST------KGPDEAKIK 111
>gi|397478947|ref|XP_003810795.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 4 [Pan
paniscus]
Length = 557
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 35 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 94
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 95 GSKVQEST------KGPDEAKIK 111
>gi|397478945|ref|XP_003810794.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 3 [Pan
paniscus]
Length = 578
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 35 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 94
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 95 GSKVQEST------KGPDEAKIK 111
>gi|156377784|ref|XP_001630826.1| predicted protein [Nematostella vectensis]
gi|156217854|gb|EDO38763.1| predicted protein [Nematostella vectensis]
Length = 587
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G L ++LDDRALDAL+E+ EGA+ VLNQF S+L HV NKSAFLCG+MKTYR+K+R
Sbjct: 34 GSLAPEELDDRALDALREFNEEGALEVLNQFASSDLSHVQNKSAFLCGVMKTYREKNRMR 93
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G T+ LKGPDE KIK
Sbjct: 94 RDGQDPTAG---LKGPDEAKIK 112
>gi|74219109|dbj|BAE26696.1| unnamed protein product [Mus musculus]
Length = 610
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 30 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 89
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 90 GSKVQEST------KGPDEAKIK 106
>gi|47550699|ref|NP_999861.1| heterogeneous nuclear ribonucleoprotein Q [Danio rerio]
gi|34784487|gb|AAH56750.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Danio
rerio]
gi|46249711|gb|AAH68373.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Danio
rerio]
Length = 630
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 10/95 (10%)
Query: 4 ENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLC 63
E + I+L+ G + H DLD+RA++ALKE+ EGA+ VL QF ES+L HV NKSAFLC
Sbjct: 41 EKLDEIYLA----GLVAHSDLDERAIEALKEFNEEGALQVLIQFKESDLSHVQNKSAFLC 96
Query: 64 GIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
G+MKTYRQ+ + G V ST KGPDE KIK
Sbjct: 97 GVMKTYRQREKQGTKVVEST------KGPDEAKIK 125
>gi|13435603|gb|AAH04679.1| Hnrpr protein, partial [Mus musculus]
Length = 601
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 21 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 80
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 81 GSKVQEST------KGPDEAKIK 97
>gi|74228775|dbj|BAE21877.1| unnamed protein product [Mus musculus]
Length = 604
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 24 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 83
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 84 GSKVQEST------KGPDEAKIK 100
>gi|144952800|gb|ABP04054.1| RNA-binding protein [Pinctada fucata]
Length = 624
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 9/83 (10%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL H DLD+RALDALKE ++ AIAVL QF ES+LEHV NKSAFLCG+MKTYRQ + G
Sbjct: 52 GKLAHADLDERALDALKELNADDAIAVLKQFCESSLEHVGNKSAFLCGMMKTYRQNKKHG 111
Query: 77 M-AGVASTSAVLTLKGPDEEKIK 98
A VA KGPDE K+K
Sbjct: 112 ANAQVA--------KGPDEAKLK 126
>gi|171846506|gb|AAI61767.1| syncrip protein [Xenopus (Silurana) tropicalis]
Length = 638
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 10/95 (10%)
Query: 4 ENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLC 63
E + I++S G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLC
Sbjct: 56 EKLDEIYIS----GLVTHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLC 111
Query: 64 GIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
G+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 112 GVMKTYRQREKQGTK-VADSS-----KGPDESKIK 140
>gi|74141454|dbj|BAB27533.3| unnamed protein product [Mus musculus]
Length = 381
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 21 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 80
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 81 GSKVQEST------KGPDEAKIK 97
>gi|291222526|ref|XP_002731265.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Saccoglossus kowalevskii]
Length = 648
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 9/95 (9%)
Query: 4 ENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLC 63
EN+ I+ S G L H +LD+RALDALKE+ EGA+AVL QF ES+L HV+NKSAFLC
Sbjct: 53 ENLDKIYQS----GTLTHGELDERALDALKEFNEEGALAVLKQFSESDLSHVNNKSAFLC 108
Query: 64 GIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
G+MKTYRQ+++ + ++A GPDE K+K
Sbjct: 109 GVMKTYRQRAK-----LKQSTAADARPGPDEAKLK 138
>gi|432881549|ref|XP_004073835.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Oryzias
latipes]
Length = 633
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 10/95 (10%)
Query: 4 ENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLC 63
EN+ IF + G + + DLD+RA+DAL+E+ EGA+ VL QF ES+L HV NKSAFLC
Sbjct: 46 ENLDNIFQT----GLVAYADLDERAIDALREFNEEGALTVLQQFKESDLSHVQNKSAFLC 101
Query: 64 GIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
G+MKTYRQ+ + G ST KGPDE KIK
Sbjct: 102 GVMKTYRQREKQGSKVQEST------KGPDEAKIK 130
>gi|147900289|ref|NP_001084953.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Xenopus
laevis]
gi|47122815|gb|AAH70529.1| MGC78820 protein [Xenopus laevis]
Length = 624
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 54 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 113
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 114 TK-VADSS-----KGPDESKIK 129
>gi|149637545|ref|XP_001510103.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Ornithorhynchus anatinus]
Length = 623
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|148694590|gb|EDL26537.1| mCG16769, isoform CRA_c [Mus musculus]
Length = 612
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 73 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 131
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 132 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 176
>gi|146762521|gb|ABQ45361.1| synaptotagmin-binding cytoplasmic RNA-interacting protein [Marmota
monax]
Length = 198
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFPGKLL-------------HKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P K++ H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 69 IHSENFQTL-LDAGLPQKVVEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 127
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 128 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 172
>gi|432936836|ref|XP_004082303.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Oryzias
latipes]
Length = 542
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLDDRA++ALKE+ EGA+ VL+QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVSHSDLDDRAIEALKEFNEEGALQVLSQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
V+ TS KGPDE KIK
Sbjct: 110 TK-VSDTS-----KGPDEAKIK 125
>gi|327261565|ref|XP_003215600.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Anolis
carolinensis]
Length = 634
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 61 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 120
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 121 TK-VADSS-----KGPDEAKIK 136
>gi|326916225|ref|XP_003204410.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Meleagris gallopavo]
Length = 562
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|345326436|ref|XP_003431043.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q
[Ornithorhynchus anatinus]
Length = 562
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|355722853|gb|AES07708.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Mustela
putorius furo]
Length = 698
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 124 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 182
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 183 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 227
>gi|355561882|gb|EHH18514.1| hypothetical protein EGK_15134, partial [Macaca mulatta]
Length = 434
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|33416526|gb|AAH55863.1| Syncrip protein, partial [Mus musculus]
Length = 667
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 66 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 124
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 125 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 169
>gi|37589144|gb|AAH58807.1| Syncrip protein, partial [Mus musculus]
Length = 635
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 95 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 153
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 154 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 198
>gi|354466428|ref|XP_003495676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Cricetulus griseus]
Length = 623
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDESKIK 125
>gi|355694934|gb|AER99835.1| heteroproteinous nuclear ribonucleoprotein R [Mustela putorius
furo]
Length = 199
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 16 PGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
PG + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ +
Sbjct: 26 PGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQ 85
Query: 76 GMAGVASTSAVLTLKGPDEEKIK 98
G ST KGPDE KIK
Sbjct: 86 GSKVQEST------KGPDEAKIK 102
>gi|301775589|ref|XP_002923215.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 5
[Ailuropoda melanoleuca]
Length = 626
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|417412066|gb|JAA52448.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily, partial [Desmodus rotundus]
Length = 638
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 37 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 95
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 96 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 140
>gi|345326438|ref|XP_003431044.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q
[Ornithorhynchus anatinus]
Length = 588
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|326916227|ref|XP_003204411.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Meleagris gallopavo]
Length = 448
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|114145493|ref|NP_062640.2| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Mus musculus]
gi|44888326|sp|Q7TMK9.2|HNRPQ_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Glycine- and tyrosine-rich
RNA-binding protein; Short=GRY-RBP; AltName:
Full=NS1-associated protein 1; AltName:
Full=Synaptotagmin-binding, cytoplasmic RNA-interacting
protein; AltName: Full=pp68
gi|148694587|gb|EDL26534.1| mCG16769, isoform CRA_a [Mus musculus]
gi|148694589|gb|EDL26536.1| mCG16769, isoform CRA_a [Mus musculus]
Length = 623
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|194216234|ref|XP_001915169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Equus caballus]
Length = 623
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|3037013|gb|AAC12926.1| Gry-rbp [Homo sapiens]
gi|15809586|gb|AAK59703.1| hnRNP Q3 [Homo sapiens]
Length = 623
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|351702127|gb|EHB05046.1| Heterogeneous nuclear ribonucleoprotein Q [Heterocephalus glaber]
Length = 623
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|189069313|dbj|BAG36345.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAKKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|228008291|ref|NP_006363.4| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Homo sapiens]
gi|302564259|ref|NP_001180774.1| heterogeneous nuclear ribonucleoprotein Q [Macaca mulatta]
gi|109071945|ref|XP_001089294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 8
[Macaca mulatta]
gi|291396562|ref|XP_002714605.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 1 [Oryctolagus cuniculus]
gi|301775585|ref|XP_002923213.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Ailuropoda melanoleuca]
gi|332218419|ref|XP_003258353.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|345778171|ref|XP_532223.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Canis lupus familiaris]
gi|348578326|ref|XP_003474934.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Cavia porcellus]
gi|358413806|ref|XP_002705232.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Bos
taurus]
gi|359068810|ref|XP_002690247.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Bos
taurus]
gi|395737457|ref|XP_003776919.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Pongo abelii]
gi|397504636|ref|XP_003822890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3 [Pan
paniscus]
gi|402867572|ref|XP_003897917.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Papio anubis]
gi|403261187|ref|XP_003923009.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Saimiri
boliviensis boliviensis]
gi|426234730|ref|XP_004011345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Ovis aries]
gi|92090361|sp|O60506.2|HNRPQ_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Glycine- and tyrosine-rich
RNA-binding protein; Short=GRY-RBP; AltName:
Full=NS1-associated protein 1; AltName:
Full=Synaptotagmin-binding, cytoplasmic RNA-interacting
protein
gi|62897111|dbj|BAD96496.1| synaptotagmin binding, cytoplasmic RNA interacting protein variant
[Homo sapiens]
gi|119569014|gb|EAW48629.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_g [Homo sapiens]
gi|119569015|gb|EAW48630.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_g [Homo sapiens]
gi|261858370|dbj|BAI45707.1| synaptotagmin binding, cytoplasmic RNA interacting protein
[synthetic construct]
gi|281344763|gb|EFB20347.1| hypothetical protein PANDA_012313 [Ailuropoda melanoleuca]
gi|387539924|gb|AFJ70589.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|431838171|gb|ELK00103.1| Heterogeneous nuclear ribonucleoprotein Q [Pteropus alecto]
gi|440903331|gb|ELR54008.1| Heterogeneous nuclear ribonucleoprotein Q [Bos grunniens mutus]
Length = 623
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|326916229|ref|XP_003204412.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Meleagris gallopavo]
Length = 527
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|3694986|gb|AAC62511.1| RRM RNA binding protein GRY-RBP [Mus musculus]
Length = 625
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|383415175|gb|AFH30801.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|384944782|gb|AFI35996.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|410227736|gb|JAA11087.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410255524|gb|JAA15729.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410304910|gb|JAA31055.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
Length = 624
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|344264671|ref|XP_003404415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Loxodonta africana]
Length = 620
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 19 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 77
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 78 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 122
>gi|350578257|ref|XP_001927626.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Sus
scrofa]
Length = 623
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|71894995|ref|NP_001026254.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Gallus
gallus]
gi|53129801|emb|CAG31416.1| hypothetical protein RCJMB04_6c17 [Gallus gallus]
Length = 448
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKRG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VAESS-----KGPDEAKIK 125
>gi|345326440|ref|XP_001510154.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Ornithorhynchus anatinus]
Length = 527
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|354466426|ref|XP_003495675.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Cricetulus griseus]
gi|344238401|gb|EGV94504.1| Heterogeneous nuclear ribonucleoprotein Q [Cricetulus griseus]
Length = 562
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDESKIK 125
>gi|417411732|gb|JAA52293.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily, partial [Desmodus rotundus]
Length = 577
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 37 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 95
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 96 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 140
>gi|15809590|gb|AAK59705.1| hnRNP Q1 [Homo sapiens]
Length = 561
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|5031512|gb|AAD38198.1|AF155568_1 NSAP1 protein [Homo sapiens]
Length = 562
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|194216236|ref|XP_001915171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Equus caballus]
Length = 562
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|291396564|ref|XP_002714606.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 2 [Oryctolagus cuniculus]
Length = 563
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|41054427|ref|NP_955973.1| synaptotagmin binding, cytoplasmic RNA interacting protein, like
[Danio rerio]
gi|28422490|gb|AAH46902.1| Synaptotagmin binding, cytoplasmic RNA interacting protein, like
[Danio rerio]
Length = 560
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLDDRA++ALKE+ EGA+ VL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 51 GLVSHSDLDDRAIEALKEFNEEGALQVLLQFRDSDLSHVQNKSAFLCGVMKTYRQREKQG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 111 TKVSDST------KGPDEAKIK 126
>gi|228008293|ref|NP_001153148.1| heterogeneous nuclear ribonucleoprotein Q isoform 5 [Homo sapiens]
gi|390461868|ref|XP_003732753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Callithrix
jacchus]
gi|119569009|gb|EAW48624.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_c [Homo sapiens]
Length = 561
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|228008400|ref|NP_001153149.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Homo sapiens]
gi|296198708|ref|XP_002746830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Callithrix jacchus]
gi|301775581|ref|XP_002923211.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Ailuropoda melanoleuca]
gi|332218413|ref|XP_003258350.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|345778175|ref|XP_003431698.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Canis lupus familiaris]
gi|348578328|ref|XP_003474935.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Cavia porcellus]
gi|358413802|ref|XP_589161.5| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2 [Bos
taurus]
gi|359068803|ref|XP_002690248.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2 [Bos
taurus]
gi|395737455|ref|XP_003776918.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Pongo abelii]
gi|397504632|ref|XP_003822888.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Pan
paniscus]
gi|402867568|ref|XP_003897915.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Papio anubis]
gi|426234728|ref|XP_004011344.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Ovis aries]
gi|119569010|gb|EAW48625.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_d [Homo sapiens]
gi|119569011|gb|EAW48626.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_d [Homo sapiens]
gi|380783245|gb|AFE63498.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
gi|383409779|gb|AFH28103.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
gi|384940996|gb|AFI34103.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
gi|410227734|gb|JAA11086.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410255522|gb|JAA15728.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410304908|gb|JAA31054.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
Length = 562
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|127799069|gb|AAH50079.2| Synaptotagmin binding, cytoplasmic RNA interacting protein [Mus
musculus]
Length = 562
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|395857930|ref|XP_003801333.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Otolemur garnettii]
Length = 562
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|344264673|ref|XP_003404416.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Loxodonta africana]
Length = 559
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 19 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 77
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 78 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 122
>gi|46362505|gb|AAH66570.1| Synaptotagmin binding, cytoplasmic RNA interacting protein, like
[Danio rerio]
Length = 560
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLDDRA++ALKE+ EGA+ VL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 51 GLVSHSDLDDRAIEALKEFNEEGALQVLLQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 111 TKVSDST------KGPDEAKIK 126
>gi|29788787|ref|NP_062770.1| heterogeneous nuclear ribonucleoprotein Q isoform 2 [Mus musculus]
gi|26330244|dbj|BAC28852.1| unnamed protein product [Mus musculus]
gi|26346458|dbj|BAC36880.1| unnamed protein product [Mus musculus]
gi|148694591|gb|EDL26538.1| mCG16769, isoform CRA_d [Mus musculus]
Length = 562
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|6576815|dbj|BAA88342.1| SYNCRIP [Mus musculus]
gi|51329959|gb|AAH80309.1| Synaptotagmin binding, cytoplasmic RNA interacting protein [Mus
musculus]
gi|127797499|gb|AAH41148.2| Syncrip protein [Mus musculus]
gi|127801712|gb|AAI08364.2| Syncrip protein [Mus musculus]
Length = 561
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|349603648|gb|AEP99431.1| Heteroproteinous nuclear ribonucleoprotein Q-like protein, partial
[Equus caballus]
Length = 367
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFPGKLL-------------HKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P K+ H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|148694588|gb|EDL26535.1| mCG16769, isoform CRA_b [Mus musculus]
Length = 299
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|224613218|gb|ACN60188.1| Heterogeneous nuclear ribonucleoprotein Q [Salmo salar]
Length = 583
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 5 GLVAHSDLDERAIEALKEFNEEGALQVLLQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 64
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 65 TKVSDST------KGPDEAKIK 80
>gi|62087776|dbj|BAD92335.1| synaptotagmin binding, cytoplasmic RNA interacting protein
variant [Homo sapiens]
Length = 534
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 22 GLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 81
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 82 TK-VADSS-----KGPDEAKIK 97
>gi|116283697|gb|AAH24283.1| SYNCRIP protein [Homo sapiens]
Length = 453
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFPGKLL-------------HKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P K+ H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 58 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 116
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 117 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 161
>gi|33874520|gb|AAH15575.1| SYNCRIP protein, partial [Homo sapiens]
Length = 417
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFPGKLL-------------HKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P K+ H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|395534549|ref|XP_003769303.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Sarcophilus
harrisii]
Length = 605
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|126310303|ref|XP_001366745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Monodelphis domestica]
Length = 623
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|338710583|ref|XP_003362387.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Equus
caballus]
Length = 588
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|449267775|gb|EMC78677.1| Heterogeneous nuclear ribonucleoprotein R [Columba livia]
Length = 633
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|444729721|gb|ELW70128.1| Heterogeneous nuclear ribonucleoprotein Q [Tupaia chinensis]
Length = 659
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEGKIK 125
>gi|154757562|gb|AAI51724.1| SYNCRIP protein [Bos taurus]
Length = 456
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFPGKLL-------------HKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P K+ H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 62 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 120
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 121 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 165
>gi|126306127|ref|XP_001362774.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Monodelphis domestica]
Length = 561
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|228008295|ref|NP_001153147.1| heterogeneous nuclear ribonucleoprotein Q isoform 4 [Homo sapiens]
gi|297678606|ref|XP_002817155.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Pongo abelii]
gi|301775587|ref|XP_002923214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 4
[Ailuropoda melanoleuca]
gi|332218421|ref|XP_003258354.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|332824482|ref|XP_518621.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Pan
troglodytes]
gi|348578332|ref|XP_003474937.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 4
[Cavia porcellus]
gi|426234738|ref|XP_004011349.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 6
[Ovis aries]
gi|296484069|tpg|DAA26184.1| TPA: synaptotagmin binding, cytoplasmic RNA interacting protein
isoform 1 [Bos taurus]
Length = 588
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|15809588|gb|AAK59704.1| hnRNP Q2 [Homo sapiens]
Length = 588
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|395857936|ref|XP_003801336.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Otolemur garnettii]
Length = 588
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|344264675|ref|XP_003404417.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Loxodonta africana]
Length = 585
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 19 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 77
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 78 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 122
>gi|119569012|gb|EAW48627.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_e [Homo sapiens]
Length = 588
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|432944515|ref|XP_004083418.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like, partial
[Oryzias latipes]
Length = 469
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 57 GLVAHSDLDERAIEALKEFNEEGALQVLVQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 116
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
T T KGPDE KIK
Sbjct: 117 ------TKVSRTSKGPDEAKIK 132
>gi|132626770|ref|NP_001006309.3| heterogeneous nuclear ribonucleoprotein R [Gallus gallus]
gi|326932873|ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Meleagris gallopavo]
Length = 633
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|74207436|dbj|BAE30898.1| unnamed protein product [Mus musculus]
Length = 632
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|5031755|ref|NP_005817.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Homo sapiens]
gi|73950240|ref|XP_852945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Canis lupus familiaris]
gi|301754932|ref|XP_002913314.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Ailuropoda melanoleuca]
gi|332244972|ref|XP_003271637.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Nomascus leucogenys]
gi|332807931|ref|XP_513191.3| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 4 [Pan
troglodytes]
gi|397478943|ref|XP_003810793.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2 [Pan
paniscus]
gi|402853336|ref|XP_003891352.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Papio anubis]
gi|426328275|ref|XP_004024925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Gorilla gorilla gorilla]
gi|12230547|sp|O43390.1|HNRPR_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein R;
Short=hnRNP R
gi|2697103|gb|AAC39540.1| heterogeneous nuclear ribonucleoprotein R [Homo sapiens]
gi|119615448|gb|EAW95042.1| heterogeneous nuclear ribonucleoprotein R, isoform CRA_c [Homo
sapiens]
gi|168277942|dbj|BAG10949.1| heterogeneous nuclear ribonucleoprotein R [synthetic construct]
gi|281351549|gb|EFB27133.1| hypothetical protein PANDA_001090 [Ailuropoda melanoleuca]
gi|380784785|gb|AFE64268.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Macaca
mulatta]
gi|383408165|gb|AFH27296.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Macaca
mulatta]
gi|384939486|gb|AFI33348.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Macaca
mulatta]
gi|410224016|gb|JAA09227.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410262100|gb|JAA19016.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410301026|gb|JAA29113.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410350925|gb|JAA42066.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
Length = 633
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|338722113|ref|XP_001501475.3| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Equus caballus]
gi|344287364|ref|XP_003415423.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Loxodonta
africana]
gi|348571199|ref|XP_003471383.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Cavia
porcellus]
Length = 633
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|426221978|ref|XP_004005182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Ovis aries]
Length = 633
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|223648796|gb|ACN11156.1| Heterogeneous nuclear ribonucleoprotein R [Salmo salar]
Length = 633
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 52 GLVAYTDLDERAIDALREFNEEGALSVLLQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 111
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 112 SKVQEST------KGPDETKIK 127
>gi|126328455|ref|XP_001366091.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Monodelphis
domestica]
Length = 633
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|37681889|gb|AAQ97822.1| NS1-associated protein 1 [Danio rerio]
Length = 558
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLDDRA++ALKE+ EGA+ VL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 51 GLVSHSDLDDRAIEALKEFNEEGALQVLLQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 111 TKVSDST------KGPDEAKIK 126
>gi|449488926|ref|XP_004174439.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein R-like [Taeniopygia guttata]
Length = 517
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|74194838|dbj|BAE26010.1| unnamed protein product [Mus musculus]
Length = 632
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|417403514|gb|JAA48557.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily [Desmodus rotundus]
Length = 633
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|431891280|gb|ELK02157.1| Heterogeneous nuclear ribonucleoprotein R [Pteropus alecto]
Length = 633
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|390465455|ref|XP_002750457.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Callithrix jacchus]
gi|403287392|ref|XP_003934932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Saimiri boliviensis boliviensis]
Length = 633
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|327288394|ref|XP_003228911.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Anolis
carolinensis]
Length = 632
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|129277529|ref|NP_001076077.1| heterogeneous nuclear ribonucleoprotein R [Bos taurus]
gi|126717461|gb|AAI33300.1| HNRNPR protein [Bos taurus]
gi|296489987|tpg|DAA32100.1| TPA: heterogeneous nuclear ribonucleoprotein R [Bos taurus]
gi|440897846|gb|ELR49456.1| Heterogeneous nuclear ribonucleoprotein R [Bos grunniens mutus]
Length = 633
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|156151394|ref|NP_001095868.1| heterogeneous nuclear ribonucleoprotein R isoform 1 [Homo sapiens]
gi|12655185|gb|AAH01449.1| HNRPR protein [Homo sapiens]
gi|123982706|gb|ABM83094.1| heterogeneous nuclear ribonucleoprotein R [synthetic construct]
gi|123997373|gb|ABM86288.1| heterogeneous nuclear ribonucleoprotein R [synthetic construct]
gi|383408163|gb|AFH27295.1| heterogeneous nuclear ribonucleoprotein R isoform 1 [Macaca
mulatta]
gi|384939484|gb|AFI33347.1| heterogeneous nuclear ribonucleoprotein R isoform 1 [Macaca
mulatta]
gi|410262102|gb|JAA19017.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410301028|gb|JAA29114.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410350927|gb|JAA42067.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
Length = 636
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|27903509|gb|AAO24773.1| heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus]
Length = 632
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|228008398|ref|NP_001153146.1| heterogeneous nuclear ribonucleoprotein Q isoform 3 [Homo sapiens]
gi|291396566|ref|XP_002714607.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 3 [Oryctolagus cuniculus]
gi|296198706|ref|XP_002746829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Callithrix jacchus]
gi|301775583|ref|XP_002923212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Ailuropoda melanoleuca]
gi|332218417|ref|XP_003258352.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|348578334|ref|XP_003474938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 5
[Cavia porcellus]
gi|397504634|ref|XP_003822889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2 [Pan
paniscus]
gi|402867570|ref|XP_003897916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Papio anubis]
gi|426234736|ref|XP_004011348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 5
[Ovis aries]
gi|21619168|gb|AAH32643.1| SYNCRIP protein [Homo sapiens]
gi|119569013|gb|EAW48628.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_f [Homo sapiens]
gi|296484070|tpg|DAA26185.1| TPA: synaptotagmin binding, cytoplasmic RNA interacting protein
isoform 2 [Bos taurus]
gi|325464513|gb|ADZ16027.1| synaptotagmin binding, cytoplasmic RNA interacting protein
[synthetic construct]
Length = 527
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|62990189|ref|NP_783193.2| heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus]
gi|62471548|gb|AAH93598.1| Heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus]
Length = 632
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|395857932|ref|XP_003801334.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Otolemur garnettii]
Length = 527
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|344264677|ref|XP_003404418.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Loxodonta africana]
Length = 524
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 19 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 77
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 78 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 122
>gi|338710585|ref|XP_003362388.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Equus
caballus]
Length = 527
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 125
>gi|33859724|ref|NP_083147.1| heterogeneous nuclear ribonucleoprotein R [Mus musculus]
gi|17066599|gb|AAL35332.1|AF441128_1 heterogeneous nuclear ribonucleoprotein R [Mus musculus]
gi|23273731|gb|AAH38051.1| Heterogeneous nuclear ribonucleoprotein R [Mus musculus]
Length = 632
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|395821027|ref|XP_003783851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Otolemur garnettii]
Length = 633
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|354483012|ref|XP_003503689.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Cricetulus griseus]
gi|344256125|gb|EGW12229.1| Heterogeneous nuclear ribonucleoprotein R [Cricetulus griseus]
Length = 633
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|297282467|ref|XP_001111802.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform 1
[Macaca mulatta]
Length = 636
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|426221980|ref|XP_004005183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Ovis aries]
Length = 595
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|73950236|ref|XP_866562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 7
[Canis lupus familiaris]
gi|403287394|ref|XP_003934933.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Saimiri boliviensis boliviensis]
gi|410966348|ref|XP_003989695.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Felis catus]
gi|85681819|gb|ABC73063.1| heterogeneous nuclear ribonucleoprotein-R2 [Homo sapiens]
Length = 595
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|338722115|ref|XP_003364486.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Equus caballus]
Length = 595
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|148697994|gb|EDL29941.1| heterogeneous nuclear ribonucleoprotein R [Mus musculus]
Length = 607
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 87 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 146
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 147 SKVQEST------KGPDEAKIK 162
>gi|348531623|ref|XP_003453308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Oreochromis niloticus]
Length = 535
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 10/95 (10%)
Query: 4 ENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLC 63
E + I+L+ G + H DLDDRA++ALKE+ EGA+ VL QF +S+L HV NKSAFLC
Sbjct: 40 EKLDEIYLA----GLVSHSDLDDRAIEALKEFNEEGALQVLLQFKDSDLSHVQNKSAFLC 95
Query: 64 GIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
G+MKTYRQ+ + G T T KGPDE KIK
Sbjct: 96 GVMKTYRQREKQG------TKVSDTNKGPDEAKIK 124
>gi|456753306|gb|JAA74142.1| heterogeneous nuclear ribonucleoprotein R tv2 [Sus scrofa]
Length = 633
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYIDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|334324402|ref|XP_003340516.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Monodelphis
domestica]
Length = 588
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
VA +S KGPDE KIK
Sbjct: 110 TK-VADSS-----KGPDEAKIK 125
>gi|335307327|ref|XP_003127745.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Sus scrofa]
Length = 589
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYIDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|395821031|ref|XP_003783853.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 3
[Otolemur garnettii]
Length = 595
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|223648358|gb|ACN10937.1| Heterogeneous nuclear ribonucleoprotein R [Salmo salar]
Length = 635
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 56 GLVAYADLDERAIDALREFNEEGALSVLLQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 115
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 116 SKVQEST------KGPDESKIK 131
>gi|351705983|gb|EHB08902.1| Heterogeneous nuclear ribonucleoprotein R [Heterocephalus glaber]
Length = 670
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|194386914|dbj|BAG59823.1| unnamed protein product [Homo sapiens]
Length = 595
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SRVQEST------KGPDEAKIK 128
>gi|395521675|ref|XP_003764941.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Sarcophilus
harrisii]
Length = 563
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|348529965|ref|XP_003452482.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Oreochromis
niloticus]
Length = 631
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALTVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|426221982|ref|XP_004005184.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 3
[Ovis aries]
Length = 598
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|149024313|gb|EDL80810.1| heterogeneous nuclear ribonucleoprotein R, isoform CRA_a [Rattus
norvegicus]
Length = 447
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|223649064|gb|ACN11290.1| Heterogeneous nuclear ribonucleoprotein R [Salmo salar]
Length = 631
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 55 GLVAYADLDERAIDALREFNEEGALSVLLQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 114
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 115 NKVQEST------KGPDESKIK 130
>gi|426353905|ref|XP_004044415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 623
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGP+E KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPNEAKIK 125
>gi|426353897|ref|XP_004044411.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 562
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGP+E KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPNEAKIK 125
>gi|47087393|ref|NP_998591.1| heterogeneous nuclear ribonucleoprotein R [Danio rerio]
gi|31419669|gb|AAH53413.1| Heterogeneous nuclear ribonucleoprotein R [Danio rerio]
Length = 214
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RALDAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 58 GLVAYADLDERALDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 117
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
S+ KGPDE KIK
Sbjct: 118 NKVQESS------KGPDETKIK 133
>gi|410915935|ref|XP_003971442.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Takifugu rubripes]
Length = 637
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 54 GLVAHSDLDERAIEALKEFNEEGALQVLVQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 113
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
V+ +S KGPDE KIK
Sbjct: 114 TK-VSDSS-----KGPDEAKIK 129
>gi|47212367|emb|CAF89932.1| unnamed protein product [Tetraodon nigroviridis]
Length = 636
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALQVLVQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
V+ +S KGPDE KIK
Sbjct: 110 TK-VSDSS-----KGPDEAKIK 125
>gi|47230069|emb|CAG10483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 621
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLDDRA++ALKE+ EGA+ VL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVSHSDLDDRAIEALKEFNEEGALQVLLQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
V+ TS KGPDE KIK
Sbjct: 110 TK-VSDTS-----KGPDEAKIK 125
>gi|410898108|ref|XP_003962540.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Takifugu
rubripes]
Length = 539
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLDDRA++ALKE+ EGA+ VL QF +S+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVSHSDLDDRAIEALKEFNEEGALQVLLQFKDSDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
T T KGPDE KIK
Sbjct: 110 ------TKVSDTSKGPDEAKIK 125
>gi|197102464|ref|NP_001126631.1| heterogeneous nuclear ribonucleoprotein R [Pongo abelii]
gi|55732180|emb|CAH92794.1| hypothetical protein [Pongo abelii]
Length = 633
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+M+TYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMETYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|47219493|emb|CAG10857.1| unnamed protein product [Tetraodon nigroviridis]
Length = 629
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 51 GLVAYADLDERAIDALREFNEEGALTVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
S KGPDE KIK
Sbjct: 111 SKVQESN------KGPDEAKIK 126
>gi|223648918|gb|ACN11217.1| Heterogeneous nuclear ribonucleoprotein Q [Salmo salar]
Length = 619
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 10/95 (10%)
Query: 4 ENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLC 63
E + I+++ G + H DLD+RA++ALKE+ EGA+ VL +F ES+L HV NKSAFLC
Sbjct: 52 EKLDAIYIA----GLVAHSDLDERAIEALKEFNEEGALQVLLEFKESDLSHVQNKSAFLC 107
Query: 64 GIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
G+MKTYRQ+ + G ST KGPDE KIK
Sbjct: 108 GVMKTYRQREKQGTKVSDST------KGPDEAKIK 136
>gi|47202753|emb|CAF87112.1| unnamed protein product [Tetraodon nigroviridis]
Length = 165
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALQVLVQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
T + KGPDE KIK
Sbjct: 110 ------TKVSDSSKGPDEAKIK 125
>gi|348518315|ref|XP_003446677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Oreochromis niloticus]
Length = 629
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ +GA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHGDLDERAIEALKEFNEDGALQVLVQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
T ++KGPDE KIK
Sbjct: 110 ------TKVSDSIKGPDEAKIK 125
>gi|426353903|ref|XP_004044414.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 527
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 69/111 (62%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGP+E KIK
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPNEAKIK 125
>gi|410915937|ref|XP_003971443.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Takifugu rubripes]
Length = 598
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALQVLVQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
V+ +S KGPDE KIK
Sbjct: 110 TK-VSDSS-----KGPDEAKIK 125
>gi|410911698|ref|XP_003969327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Takifugu
rubripes]
Length = 629
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 51 GLVEYADLDERAIDALREFNEEGALTVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 110
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
S KGPDE KIK
Sbjct: 111 SKVQESN------KGPDESKIK 126
>gi|345320008|ref|XP_001511604.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R
[Ornithorhynchus anatinus]
Length = 479
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+RA+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
+ V +S KGPDE KIK
Sbjct: 113 -SKVQDSS-----KGPDEAKIK 128
>gi|348518317|ref|XP_003446678.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Oreochromis niloticus]
Length = 594
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H DLD+RA++ALKE+ +GA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 50 GLVAHGDLDERAIEALKEFNEDGALQVLVQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 109
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
T ++KGPDE KIK
Sbjct: 110 ------TKVSDSIKGPDEAKIK 125
>gi|410959606|ref|XP_004001668.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q [Felis catus]
Length = 562
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 20/111 (18%)
Query: 1 IHLENIQIIFLSHNFP-------------GKLLHKDLDDRALDALKEYPSEGAIAVLNQF 47
IH EN Q + L P G + H DLD+RA++ALKE+ +GA+AVL QF
Sbjct: 22 IHSENFQTL-LDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQF 80
Query: 48 LESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
+S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE K
Sbjct: 81 KDSDLSHVQNKSAFLCGVMKTYRQREKXGTK-VADSS-----KGPDEAXFK 125
>gi|189053709|dbj|BAG35961.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + + DLD+ A+DAL+E+ EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G
Sbjct: 53 GLVAYVDLDEGAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQG 112
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
ST KGPDE KIK
Sbjct: 113 SKVQEST------KGPDEAKIK 128
>gi|405972362|gb|EKC37135.1| Heterogeneous nuclear ribonucleoprotein Q [Crassostrea gigas]
Length = 628
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
GKL +DLD+RA+DALKEY + AIAVL QF ES+LEHV NKSAFLCG+MKTYRQ + G
Sbjct: 48 GKLSPEDLDERAMDALKEYNPDDAIAVLKQFCESSLEHVGNKSAFLCGMMKTYRQNKKQG 107
Query: 77 MAGVASTSAVLTLKGPDEEKI 97
+ +GPD K+
Sbjct: 108 AQASPA-------RGPDPNKL 121
>gi|443733097|gb|ELU17586.1| hypothetical protein CAPTEDRAFT_178834 [Capitella teleta]
Length = 545
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/85 (57%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSR-- 74
G L H DLD+RALDALKE+P+E I VL +F SNL+HVSNKSAFLCG+MKTYRQK++
Sbjct: 53 GILSHGDLDERALDALKEFPAEDGIGVLKEFQCSNLDHVSNKSAFLCGVMKTYRQKNKMA 112
Query: 75 -SGMAGVASTSAVLTLKGPDEEKIK 98
A A+ + GPDE K+K
Sbjct: 113 AQQAAAAAADQGGVKKPGPDEAKLK 137
>gi|313239224|emb|CBY14179.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 7/83 (8%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + H++LDDRA DALKE+ EGA AVL QF +SNL HV NKSAFLCG+MKTYRQK+
Sbjct: 55 GLVKHEELDDRAFDALKEFECEGACAVLQQFKDSNLSHVQNKSAFLCGVMKTYRQKA--- 111
Query: 77 MAGVASTSAVLTLKG-PDEEKIK 98
+A T G PDE KIK
Sbjct: 112 ---IAEGRLQPTPHGHPDEAKIK 131
>gi|260791540|ref|XP_002590787.1| hypothetical protein BRAFLDRAFT_218629 [Branchiostoma floridae]
gi|229275983|gb|EEN46798.1| hypothetical protein BRAFLDRAFT_218629 [Branchiostoma floridae]
Length = 637
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 8/84 (9%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQ--KSR 74
G L +DLD+RALDAL+E+ GA VL QF ES+L HV NKSAFLCG+MKTYRQ K++
Sbjct: 46 GVLSPEDLDERALDALREFDESGAHDVLKQFAESDLSHVQNKSAFLCGVMKTYRQRNKNK 105
Query: 75 SGMAGVASTSAVLTLKGPDEEKIK 98
G AS KGPDE KIK
Sbjct: 106 QNQQGDASK------KGPDETKIK 123
>gi|223649326|gb|ACN11421.1| Heterogeneous nuclear ribonucleoprotein R [Salmo salar]
Length = 628
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G L + DLD+RA+DAL+ + GA++VL+QF ES+L HV NKSAFLC MKTYRQ+ + G
Sbjct: 55 GLLAYADLDERAIDALRAFNEVGALSVLSQFKESDLTHVQNKSAFLCAAMKTYRQREKQG 114
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
+ V TS KGP E KIK
Sbjct: 115 -SKVQETS-----KGPAESKIK 130
>gi|198418309|ref|XP_002123977.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein R
[Ciona intestinalis]
Length = 581
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVAS 82
DLD+RA++ALKE EGA+AVL QF ESNL+HV NKSAFLCG++K +RQ+ + +AG
Sbjct: 52 DLDERAIEALKELDEEGALAVLKQFNESNLQHVHNKSAFLCGVIKIHRQRCKEELAG--H 109
Query: 83 TSAVLTLKGPDEEKIK 98
+ GP+E+KI+
Sbjct: 110 INGDTKKSGPNEDKIQ 125
>gi|72086008|ref|XP_793277.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Strongylocentrotus purpuratus]
Length = 638
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G L ++LD+RA++ALKE + VL QF ES+L HV+NKSAFLCG++KTYRQKSR
Sbjct: 58 GILADEELDERAIEALKELDETSKLGVLKQFGESDLSHVNNKSAFLCGVIKTYRQKSR-- 115
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
+ + KGPDE KIK
Sbjct: 116 ---MKQSQGGQEPKGPDEAKIK 134
>gi|449676978|ref|XP_002157894.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Hydra
magnipapillata]
Length = 623
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSR-- 74
G L +LDDRAL+ALKE+ + A VL QF +S+L HV NKSAFLCG+MKTYR K +
Sbjct: 35 GVLRVDELDDRALEALKEFNEDDASNVLEQFCKSDLSHVQNKSAFLCGVMKTYRAKMKNK 94
Query: 75 ------SGMAGVASTSAVLTLKGPDEEKIK 98
S AGV + +GP EEK+K
Sbjct: 95 DSIPTPSVGAGVTKSEVAEIKQGPHEEKVK 124
>gi|15986735|gb|AAL11726.1|AF408434_1 RRM RNA binding protein NSAP1 [Mus musculus]
Length = 558
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 6/66 (9%)
Query: 33 KEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGP 92
KE+ +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGP
Sbjct: 1 KEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGP 54
Query: 93 DEEKIK 98
DE KIK
Sbjct: 55 DEAKIK 60
>gi|26347007|dbj|BAC37152.1| unnamed protein product [Mus musculus]
Length = 491
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
Query: 39 GAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIK 98
GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G VA +S KGPDE KIK
Sbjct: 1 GALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPDEAKIK 54
>gi|156377726|ref|XP_001630797.1| predicted protein [Nematostella vectensis]
gi|156217825|gb|EDO38734.1| predicted protein [Nematostella vectensis]
Length = 364
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 8/76 (10%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
+ LDD AL LKE+P A+ +LNQF SNL +V+NKSAFLCGIM++YR+K + G
Sbjct: 12 RSLDDLALSVLKEFPENNALEILNQFSRSNLANVNNKSAFLCGIMRSYREKMKLG----- 66
Query: 82 STSAVLTLKGPDEEKI 97
S VLT P+ KI
Sbjct: 67 GLSQVLT---PEPAKI 79
>gi|393911204|gb|EJD76208.1| HnRNP-R, variant [Loa loa]
Length = 696
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
++LDDRA++ L+ P E A+ ++ + ES L V NK+ FL +M+ +R K R A VA
Sbjct: 168 QELDDRAIEMLRSLPLEHALFIIKEVKESKLMGVQNKAQFLMSVMRNFRDKVRQLGANVA 227
Query: 82 STSAVLTLKGPDEEKIK 98
+ ++ GP EKIK
Sbjct: 228 LSQKLVN--GPSVEKIK 242
>gi|393911205|gb|EJD76209.1| HnRNP-R [Loa loa]
Length = 729
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
++LDDRA++ L+ P E A+ ++ + ES L V NK+ FL +M+ +R K R A VA
Sbjct: 201 QELDDRAIEMLRSLPLEHALFIIKEVKESKLMGVQNKAQFLMSVMRNFRDKVRQLGANVA 260
Query: 82 STSAVLTLKGPDEEKIK 98
+ ++ GP EKIK
Sbjct: 261 LSQKLVN--GPSVEKIK 275
>gi|402595099|gb|EJW89025.1| heterogeneous nuclear ribonucleoprotein Q [Wuchereria bancrofti]
Length = 688
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
++LDDRA++ L+ P + A+ ++ + ES L V NK+ FL +M+ +R K+R A VA
Sbjct: 180 QELDDRAIEMLRSLPLDHALFIIKEVKESKLMGVQNKAQFLMSVMRNFRDKARQLGANVA 239
Query: 82 STSAVLTLKGPDEEKIK 98
+ ++ GP EKIK
Sbjct: 240 LSQKLVN--GPSVEKIK 254
>gi|170592443|ref|XP_001900974.1| hnRNP-R, Q splicing factor family protein [Brugia malayi]
gi|158591041|gb|EDP29654.1| hnRNP-R, Q splicing factor family protein [Brugia malayi]
Length = 709
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
++LDDRA++ L+ P + A+ ++ + ES L V NK+ FL +M+ +R K+R A VA
Sbjct: 181 QELDDRAIEMLRSLPLDHALFIIKEVKESKLMGVQNKAQFLMSVMRNFRDKARQLGANVA 240
Query: 82 STSAVLTLKGPDEEKIK 98
+ ++ GP EKIK
Sbjct: 241 LSQKLVN--GPSVEKIK 255
>gi|312083669|ref|XP_003143959.1| hypothetical protein LOAG_08379 [Loa loa]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
++LDDRA++ L+ P E A+ ++ + ES L V NK+ FL +M+ +R K R A VA
Sbjct: 163 QELDDRAIEMLRSLPLEHALFIIKEVKESKLMGVQNKAQFLMSVMRNFRDKVRQLGANVA 222
Query: 82 STSAVLTLKGPDEEKIK 98
+ ++ GP EKIK
Sbjct: 223 LSQKLVN--GPSVEKIK 237
>gi|324519668|gb|ADY47449.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 266
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVAS 82
+LD+RA++ L+ P++ A+ V+ + SNL V NK+ F IM+ +R K R GV +
Sbjct: 54 ELDERAIEMLRGLPTDHALFVIKEVQGSNLVGVQNKAQFFMSIMRNFRDKVRQ--FGVQT 111
Query: 83 TSAVLTLKGPDEEKIK 98
+ + GPD KIK
Sbjct: 112 ALSQPLVNGPDATKIK 127
>gi|324505755|gb|ADY42468.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
gi|324505923|gb|ADY42537.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 290
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVAS 82
+LD+RA++ L+ P++ A+ V+ + SNL V NK+ F IM+ +R K R GV +
Sbjct: 84 ELDERAIEMLRGLPTDHALFVIKEVQGSNLVGVQNKAQFFMSIMRNFRDKVRQ--FGVQT 141
Query: 83 TSAVLTLKGPDEEKIK 98
+ + GPD KIK
Sbjct: 142 ALSQPLVNGPDATKIK 157
>gi|324511732|gb|ADY44878.1| Heterogeneous nuclear ribonucleoprotein Q, partial [Ascaris suum]
Length = 561
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
+D+D+RA+D L+ P + AI V+ + +SNL V N + F+ +M+ +R K R G
Sbjct: 86 EDMDERAIDMLRSLPVDHAIFVIGEVKKSNLLGVQNHAQFMMSMMRNFRDKVRQ--LGAQ 143
Query: 82 STSAVLTLKGPDEEKIK 98
S + GP E IK
Sbjct: 144 SALNETLVNGPSYESIK 160
>gi|324504723|gb|ADY42035.1| Heterogeneous nuclear ribonucleoprotein R [Ascaris suum]
Length = 619
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
+D+D+RA+D L+ P + AI V+ + +SNL V N + F+ +M+ +R K R G
Sbjct: 86 EDMDERAIDMLRSLPVDHAIFVIGEVKKSNLLGVQNHAQFMMSMMRNFRDKVRQ--LGAQ 143
Query: 82 STSAVLTLKGPDEEKIK 98
S + GP E IK
Sbjct: 144 SALNETLVNGPSYESIK 160
>gi|324505135|gb|ADY42212.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 609
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
+D+D+RA+D L+ P + AI V+ + +SNL V N + F+ +M+ +R K R G
Sbjct: 74 EDMDERAIDMLRSLPVDHAIFVIGEVKKSNLLGVQNHAQFMMSMMRNFRDKVRQ--LGAQ 131
Query: 82 STSAVLTLKGPDEEKIK 98
S + GP E IK
Sbjct: 132 SALNETLVNGPSYESIK 148
>gi|324505162|gb|ADY42224.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 316
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVAS 82
+LD+RA++ L+ P++ A+ V+ + SNL V NK+ F IM+ +R K R GV +
Sbjct: 84 ELDERAIEMLRGLPTDHALFVIKEVQGSNLVGVQNKAQFFMSIMRNFRDKVR--QFGVQT 141
Query: 83 TSAVLTLKGPDEEKIK 98
+ + GPD KIK
Sbjct: 142 ALSQPLVNGPDATKIK 157
>gi|324525576|gb|ADY48565.1| Heterogeneous nuclear ribonucleoprotein Q, partial [Ascaris suum]
Length = 261
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVAS 82
+LD+RA++ L+ P++ A+ V+ + SNL V NK+ F IM+ +R K R GV +
Sbjct: 84 ELDERAIEMLRGLPTDHALFVIKEVQGSNLVGVQNKAQFFMSIMRNFRDKVRQ--FGVQT 141
Query: 83 TSAVLTLKGPDEEKIK 98
+ + GPD KIK
Sbjct: 142 ALSQPLVNGPDATKIK 157
>gi|324502274|gb|ADY41001.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
gi|324504680|gb|ADY42019.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
gi|324508493|gb|ADY43584.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
gi|324508971|gb|ADY43783.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 621
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
+D+D+RA+D L+ P + AI V+ + +SNL V N + F+ +M+ +R K R G
Sbjct: 86 EDMDERAIDMLRSLPVDHAIFVIGEVKKSNLLGVQNHAQFMMSMMRNFRDKVRQ--LGAQ 143
Query: 82 STSAVLTLKGPDEEKIK 98
S + GP E IK
Sbjct: 144 SALNETLVNGPSYESIK 160
>gi|449497953|ref|XP_004174289.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q [Taeniopygia guttata]
Length = 492
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESN 51
G + H DLD+RA++ALKE+ EGA+AVL QF +S+
Sbjct: 50 GLVAHSDLDERAIEALKEFNEEGALAVLQQFKDSD 84
>gi|428177182|gb|EKX46063.1| hypothetical protein GUITHDRAFT_163095 [Guillardia theta CCMP2712]
Length = 441
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 15 FPGKLLHK-DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKS 73
F L+++ DLD + L P A+ V+ +F E+NL + NK+AF GI+K +Q +
Sbjct: 300 FQSNLVYRTDLDAKCFMELLALPEASALEVIEKFCEANLRDIRNKTAFFLGIVKRVKQSN 359
Query: 74 RSGMAGVASTSAVLTLKG 91
S G+ + + G
Sbjct: 360 PSFSYGMGMAQGNMGMSG 377
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 33/56 (58%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQK 72
GK +LD + + +L ++ + ++ F ++++ + +KSAFL G++K +R +
Sbjct: 109 GKCRRDELDSKIVASLCDFSDSVGVQIIEHFCDADMSTMRSKSAFLAGVIKRFRTE 164
>gi|339253564|ref|XP_003372005.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316967645|gb|EFV52050.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 2180
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G ++ +D+DDR L+ + E A+ V+ +F E +L VS +A+L +MKT+R + ++
Sbjct: 100 GVIMLEDVDDRILEIISSMRVEQALCVIQKFKEVDLLGVSCTAAYLGSLMKTFRDRVKN- 158
Query: 77 MAGVASTSAVLTLKGPDEEKI 97
G+ + GPD + +
Sbjct: 159 -YGLQEAMKQPLMDGPDRDAM 178
>gi|384249993|gb|EIE23473.1| hypothetical protein COCSUDRAFT_63013 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQ 71
G + D+D+RA+DAL++ A + +F E+N ++NK+ FL GI++ ++
Sbjct: 24 GDIRSSDVDNRAMDALEDLGDAAATNAVERFAEANFSRINNKNGFLMGIIRRVQE 78
>gi|341894933|gb|EGT50868.1| hypothetical protein CAEBREN_24646 [Caenorhabditis brenneri]
Length = 630
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G +DLDDRA+D + E A + + S L V+ KS ++ ++++++ + R
Sbjct: 101 GLFTPEDLDDRAIDIINSVSLEQAKFIFTEIKNSELFGVATKSLYVTSLIRSFKDRCRQ- 159
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G A+ ++ + GP+ E +K
Sbjct: 160 -QGAAAVTSGKLINGPELESVK 180
>gi|301120055|ref|XP_002907755.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106267|gb|EEY64319.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 258
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 18 KLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQ 71
KL +D+DDR +D L + E A L ++ + V+N+ AF GI+K +RQ
Sbjct: 200 KLKQEDVDDRMIDFLSWFDYETAKKALEEYNRCVSDKVNNRKAFFMGILKRFRQ 253
>gi|308505824|ref|XP_003115095.1| CRE-HRP-2 protein [Caenorhabditis remanei]
gi|308259277|gb|EFP03230.1| CRE-HRP-2 protein [Caenorhabditis remanei]
Length = 645
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G L +DLDDRA+D + E A + ++ S L V+ KS ++ ++++++ + R
Sbjct: 108 GLLSPEDLDDRAVDIINSVNLEQAKFIFSEIKSSELFGVTTKSLYVTSLIRSFKDRCRQQ 167
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
A ++ ++ GP+ E +K
Sbjct: 168 GANAVTSGKLIN--GPELESLK 187
>gi|299471131|emb|CBN78989.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 401
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G + D+D R + ++ + A A +++F +S++ + NKSAFL I++ + Q G
Sbjct: 99 GFIQKADVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRRHHQDFYGG 158
Query: 77 MAGVA 81
M G A
Sbjct: 159 MYGHA 163
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVAS 82
++DDR L+E P A+ + +F+ + +++ SA+L G+++ + R +A S
Sbjct: 216 EIDDRCRKFLREVPEHIALQAIEEFMSTERKNIRKVSAYLMGVIRKHADNYRGFVAVGTS 275
Query: 83 TSAVLTLKGPDEEKIK 98
L P E +K
Sbjct: 276 GGPPAGLPSPYEAGLK 291
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 25 DDRALDALKEYPSEGAIAVLNQFLESNLE---HVSNKSAFLCGIMKTYRQKSRSGMAGVA 81
D R ++ L E A+A LN++ + E ++ NK A+L GI++ Y+Q R+ +
Sbjct: 4 DTRLVNFLGEVDEAQALAALNEYHAAVSETSVNIRNKPAYLMGILRKYKQGQRAPLGNGT 63
Query: 82 STSAVLTLKGPDEEKIKFGSGSD 104
+ V T P+ + G+G+D
Sbjct: 64 AGGMVTT---PNAMG-RMGAGTD 82
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYR 70
G + D+D R +A E + + +F ++ + NKSA+L G++K Y+
Sbjct: 336 GIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYK 389
>gi|380489957|emb|CCF36349.1| glycosyl hydrolase family 3 [Colletotrichum higginsianum]
Length = 560
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 17 GKLLHKDLDDRALDALKEYP-----SEGAIAVLNQFLESNLEHVSNKSAFLCGIMKT--- 68
G+ + ++DDRAL L +P EGA +V+ + +N + S L GI+KT
Sbjct: 215 GEAISSNVDDRALHELYVWPFMNSLKEGAASVMCSYQRANHSYGCQNSKLLNGILKTELG 274
Query: 69 ----YRQKSRSGMAGVASTSAVLTLKGPD 93
+ M+GVAS +A L L PD
Sbjct: 275 FEGFVVSDWQGQMSGVASANAGLDLVMPD 303
>gi|299471369|emb|CBN79324.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1380
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTY 69
+LD + AL ++ + A+ +L++F E++L V N+S FL GIM+ +
Sbjct: 1020 ELDPFEVRALGKFDTADALDILDRFAEADLRRVRNRSGFLAGIMRKH 1066
>gi|348689844|gb|EGZ29658.1| hypothetical protein PHYSODRAFT_475091 [Phytophthora sojae]
Length = 307
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 18 KLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQ 71
KL D+D+R +D L + E A L ++ + V+N+ AF GI+K +RQ
Sbjct: 249 KLQKDDVDERMIDFLSWFDYETAKKALEEYNRCVSDRVNNRKAFFMGILKRFRQ 302
>gi|429855678|gb|ELA30624.1| beta-glucosidase m [Colletotrichum gloeosporioides Nara gc5]
Length = 741
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 17 GKLLHKDLDDRALDALKEYP-----SEGAIAVLNQFLESNLEHVSNKSAFLCGIMKT--- 68
G+ + ++DDR L L +P EGA +V+ + +N + S L G++KT
Sbjct: 214 GEAISSNVDDRTLHELYVFPFMDSLKEGAASVMCSYQRANHSYGCQNSHLLNGVLKTELG 273
Query: 69 ---YRQKSRSG-MAGVASTSAVLTLKGPD 93
Y G M GVAS +A L L PD
Sbjct: 274 FEGYVVSDWEGQMTGVASANAGLDLVMPD 302
>gi|268569598|ref|XP_002640564.1| C. briggsae CBR-HRP-2 protein [Caenorhabditis briggsae]
Length = 626
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G L +DLD+RA+D + + A + ++ +S L V+ KS ++ ++++++ + R
Sbjct: 93 GLLTPEDLDERAVDIINSVSVDQAKFIFSEIQKSELFGVTTKSLYVTSLIRSFKDRCRH- 151
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G A+ ++ ++GP+ E +K
Sbjct: 152 -QGAAAVTSGKLIQGPELEVMK 172
>gi|452823358|gb|EME30369.1| hypothetical protein Gasu_22770 [Galdieria sulphuraria]
Length = 599
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 24 LDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQK 72
LDDRAL+AL E ++ VL++ + +++H N S GIMK Q+
Sbjct: 539 LDDRALEALSNLRPELSLQVLDELSKVDMDHSRNISMIAMGIMKKVTQR 587
>gi|367040803|ref|XP_003650782.1| glycoside hydrolase family 3 protein [Thielavia terrestris NRRL
8126]
gi|346998043|gb|AEO64446.1| glycoside hydrolase family 3 protein [Thielavia terrestris NRRL
8126]
Length = 793
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 17 GKLLHKDLDDRALDALKEYP-----SEGAIAVLNQFLESNLEHVSNKSAFLCGIMKT--- 68
G+ + ++DDR L L +P EGA AV+ + +N + S L GI+KT
Sbjct: 238 GEAISANVDDRTLHELYVFPFMDALREGAGAVMCSYQRANHSYACQNSKLLNGILKTELG 297
Query: 69 ----YRQKSRSGMAGVASTSAVLTLKGPD 93
+ M+GVAS +A L L P+
Sbjct: 298 FEGFVVSDWDAQMSGVASANAGLDLVMPN 326
>gi|71987750|ref|NP_493049.2| Protein HRP-2, isoform a [Caenorhabditis elegans]
gi|42733185|emb|CAB70238.2| Protein HRP-2, isoform a [Caenorhabditis elegans]
Length = 611
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 17 GKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSG 76
G L +DLDDRA+D + + A + + S L V+ KS ++ ++++++ + R
Sbjct: 83 GLLGPEDLDDRAVDIINSVNLDQAKFIFTEIKNSELFGVATKSLYVTSLIRSFKDRCRQ- 141
Query: 77 MAGVASTSAVLTLKGPDEEKIK 98
G A+ ++ + GP+ +K
Sbjct: 142 -QGAAAVTSGKLINGPELAALK 162
>gi|310800628|gb|EFQ35521.1| glycosyl hydrolase family 3 N terminal domain-containing protein
[Glomerella graminicola M1.001]
Length = 765
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 17 GKLLHKDLDDRALDALKEYP-----SEGAIAVLNQFLESNLEHVSNKSAFLCGIMKT--- 68
G+ + ++DDR + L +P EGA AV+ + +N + S L GI+KT
Sbjct: 214 GESISSNVDDRTIHELYAWPFMDSLREGAAAVMCSYQRANHSYGCQNSKLLNGILKTELG 273
Query: 69 ----YRQKSRSGMAGVASTSAVLTLKGPD 93
++ +GVAS +A L L PD
Sbjct: 274 FEGFVVSDWQAQTSGVASANAGLDLVMPD 302
>gi|302830061|ref|XP_002946597.1| hypothetical protein VOLCADRAFT_86704 [Volvox carteri f.
nagariensis]
gi|300268343|gb|EFJ52524.1| hypothetical protein VOLCADRAFT_86704 [Volvox carteri f.
nagariensis]
Length = 449
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLES-NLEHVSNKSAFLCGIMKTYRQ 71
+D+DD+ALD LK + AI V++QF + + +V NK A+L G+ ++
Sbjct: 5 EDVDDKALDQLKTLRVDDAINVVDQFERAVHGGNVKNKGAYLAGVATRHKH 55
>gi|449278844|gb|EMC86583.1| Leucine-rich repeat serine/threonine-protein kinase 2 [Columba
livia]
Length = 2531
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 12 SHNFPGKLLHKDLDDRALDALKEYP-----SEGAIAVLNQFLESNLEHVSNKSAFLCGIM 66
S N LL K + LD ++++P +E A +LN E + H+ + ++
Sbjct: 427 SVNIRKTLLAKGMHMNVLDIMRKHPHCPEVAESACRILNHVFEGSFPHLDTMTVAASEVV 486
Query: 67 KTYRQKSRSGMAGVASTSAVLTLKGPDEEKIKFGSGSDFG 106
K R+ +S + + +L PD + GS D G
Sbjct: 487 KAMRKHEKSLSVQLEALRVLLHFMMPDTKNDPNGSSRDVG 526
>gi|297729321|ref|NP_001177024.1| Os12g0577100 [Oryza sativa Japonica Group]
gi|77556261|gb|ABA99057.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|255670425|dbj|BAH95752.1| Os12g0577100 [Oryza sativa Japonica Group]
Length = 414
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
D+D + +L E P + A+AVLNQFL S + NK + ++ Y+ ++ S
Sbjct: 169 DIDIHCIRSLNELPEKAAVAVLNQFLISGADK-HNKGDYFASLIAKYQAETFS 220
>gi|222617350|gb|EEE53482.1| hypothetical protein OsJ_36631 [Oryza sativa Japonica Group]
Length = 401
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
D+D + +L E P + A+AVLNQFL S + NK + ++ Y+ ++ S
Sbjct: 156 DIDIHCIRSLNELPEKAAVAVLNQFLISGADK-HNKGDYFASLIAKYQAETFS 207
>gi|270293075|ref|ZP_06199286.1| putative replication initiation and membrane attachment protein
[Streptococcus sp. M143]
gi|270279054|gb|EFA24900.1| putative replication initiation and membrane attachment protein
[Streptococcus sp. M143]
Length = 387
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEGAI 41
FLSH+ +LL K + D A+ A+K+ PSEG +
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEGEV 134
>gi|218187132|gb|EEC69559.1| hypothetical protein OsI_38857 [Oryza sativa Indica Group]
Length = 378
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 23 DLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRS 75
D+D + +L E P + A+AVLNQFL S + NK + ++ Y+ ++ S
Sbjct: 133 DIDIHCIRSLNELPEKAAVAVLNQFLISGADK-HNKGDYFASLIAKYQAETFS 184
>gi|419780758|ref|ZP_14306599.1| replication initiation and membrane attachment protein, DnaB/DnaD
family [Streptococcus oralis SK100]
gi|383184931|gb|EIC77436.1| replication initiation and membrane attachment protein, DnaB/DnaD
family [Streptococcus oralis SK100]
Length = 387
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQTPSEGEALSVSLSQVFPTLTEEVT 151
>gi|418974409|ref|ZP_13522319.1| hypothetical protein HMPREF1047_0916 [Streptococcus oralis SK1074]
gi|383348836|gb|EID26788.1| hypothetical protein HMPREF1047_0916 [Streptococcus oralis SK1074]
Length = 387
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEGEALSVSLSQVFPTLTEEVT 151
>gi|293365926|ref|ZP_06612629.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307702329|ref|ZP_07639287.1| replication initiation and membrane attachment protein
[Streptococcus oralis ATCC 35037]
gi|291315604|gb|EFE56054.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307624132|gb|EFO03111.1| replication initiation and membrane attachment protein
[Streptococcus oralis ATCC 35037]
Length = 387
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEGEALSVSLSQVFPTLTEEVT 151
>gi|401684443|ref|ZP_10816322.1| replication initiation and membrane attachment protein, DnaB/DnaD
family [Streptococcus sp. BS35b]
gi|400185687|gb|EJO19913.1| replication initiation and membrane attachment protein, DnaB/DnaD
family [Streptococcus sp. BS35b]
Length = 387
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEGEALSVSLSQVFPTLTEEVT 151
>gi|406578508|ref|ZP_11053942.1| replication initiation and membrane attachment protein, partial
[Streptococcus sp. GMD6S]
gi|404456129|gb|EKA02882.1| replication initiation and membrane attachment protein, partial
[Streptococcus sp. GMD6S]
Length = 290
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 93 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEGEALSVSLSQVFPTLTEEVT 141
>gi|406587432|ref|ZP_11062320.1| replication initiation and membrane attachment protein, partial
[Streptococcus sp. GMD1S]
gi|404473098|gb|EKA17461.1| replication initiation and membrane attachment protein, partial
[Streptococcus sp. GMD1S]
Length = 374
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEGEALSVSLSQVFPTLTEEVT 151
>gi|419817485|ref|ZP_14341644.1| replication initiation and membrane attachment protein
[Streptococcus sp. GMD4S]
gi|404465871|gb|EKA11254.1| replication initiation and membrane attachment protein
[Streptococcus sp. GMD4S]
Length = 387
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEGEALSVSLSQVFPTLTEEVT 151
>gi|414158913|ref|ZP_11415205.1| hypothetical protein HMPREF9188_01479 [Streptococcus sp. F0441]
gi|410868896|gb|EKS16860.1| hypothetical protein HMPREF9188_01479 [Streptococcus sp. F0441]
Length = 387
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG-AIAV-LNQFLESNLEHVS 56
FLSH+ +LL K + D A+ A+K+ PSEG A++V L+Q + E V+
Sbjct: 103 FLSHSVYSRLLEKKIGDVAVSAMKQAPSEGEALSVSLSQVFPTLTEEVT 151
>gi|348684487|gb|EGZ24302.1| hypothetical protein PHYSODRAFT_284903 [Phytophthora sojae]
Length = 920
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQK 72
++L + + L + A VL +F +NL +V NKS FL G++K RQ+
Sbjct: 866 EELGGKCYEVLGQLSEPLANQVLTRFAGANLSNVRNKSGFLVGVVKRARQE 916
>gi|301105667|ref|XP_002901917.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099255|gb|EEY57307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 884
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 22 KDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQK 72
++L + + L + A VL +F +NL +V NKS FL G++K RQ+
Sbjct: 830 EELGGKCYEVLGQLSEPLANQVLTRFAGANLSNVRNKSGFLIGVVKRARQE 880
>gi|358464379|ref|ZP_09174344.1| replication initiation and membrane attachment protein, DnaB/DnaD
family [Streptococcus sp. oral taxon 058 str. F0407]
gi|357067145|gb|EHI77275.1| replication initiation and membrane attachment protein, DnaB/DnaD
family [Streptococcus sp. oral taxon 058 str. F0407]
Length = 387
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 10 FLSHNFPGKLLHKDLDDRALDALKEYPSEG 39
FLSH+ +LL K + D A+ A+K+ PSEG
Sbjct: 103 FLSHSVYSRLLEKKIGDTAVSAMKQAPSEG 132
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,604,004,039
Number of Sequences: 23463169
Number of extensions: 52844287
Number of successful extensions: 132524
Number of sequences better than 100.0: 255
Number of HSP's better than 100.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 132091
Number of HSP's gapped (non-prelim): 264
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)