BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy1192
IHLENIQIIFLSHNFPGKLLHKDLDDRALDALKEYPSEGAIAVLNQFLESNLEHVSNKSA
FLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPDEEKIKFGSGSDFGLL

High Scoring Gene Products

Symbol, full name Information P value
Syp
Syncrip
protein from Drosophila melanogaster 2.9e-18
SYNCRIP
Heterogeneous nuclear ribonucleoprotein Q
protein from Homo sapiens 6.2e-14
hnrnpr
heterogeneous nuclear ribonucleoprotein R
gene_product from Danio rerio 1.3e-13
SYNCRIP
Uncharacterized protein
protein from Gallus gallus 1.8e-13
SYNCRIP
Uncharacterized protein
protein from Canis lupus familiaris 5.9e-13
syncrip
synaptotagmin binding, cytoplasmic RNA interacting protein
gene_product from Danio rerio 6.5e-13
HNRNPR
Uncharacterized protein
protein from Sus scrofa 6.6e-13
SYNCRIP
Uncharacterized protein
protein from Canis lupus familiaris 7.0e-13
SYNCRIP
Heterogeneous nuclear ribonucleoprotein Q
protein from Homo sapiens 7.1e-13
Syncrip
synaptotagmin binding, cytoplasmic RNA interacting protein
protein from Mus musculus 7.1e-13
SYNCRIP
Uncharacterized protein
protein from Sus scrofa 7.1e-13
Hnrnpr
heterogeneous nuclear ribonucleoprotein R
gene from Rattus norvegicus 7.2e-13
HNRNPR
HNRNPR protein
protein from Bos taurus 7.3e-13
HNRNPR
Uncharacterized protein
protein from Canis lupus familiaris 7.3e-13
HNRNPR
Heterogeneous nuclear ribonucleoprotein R
protein from Homo sapiens 7.3e-13
SYNCRIP
Uncharacterized protein
protein from Bos taurus 7.3e-13
HNRNPR
Uncharacterized protein
protein from Gallus gallus 7.8e-13
syncripl
synaptotagmin binding, cytoplasmic RNA interacting protein, like
gene_product from Danio rerio 5.5e-12

The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy1192
        (108 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0038826 - symbol:Syp "Syncrip" species:7227 "Droso...   231  2.9e-18   1
UNIPROTKB|F6UXX1 - symbol:SYNCRIP "Heterogeneous nuclear ...   180  6.2e-14   1
ZFIN|ZDB-GENE-040426-2766 - symbol:hnrnpr "heterogeneous ...   177  1.3e-13   1
UNIPROTKB|F1NZU2 - symbol:SYNCRIP "Uncharacterized protei...   183  1.8e-13   1
UNIPROTKB|F1LUZ6 - symbol:Hnrnpr "Protein Hnrnpr" species...   180  2.6e-13   1
UNIPROTKB|F1NWI9 - symbol:SYNCRIP "Uncharacterized protei...   183  3.3e-13   1
UNIPROTKB|F6XIK8 - symbol:SYNCRIP "Uncharacterized protei...   180  5.9e-13   1
UNIPROTKB|Q2L7G6 - symbol:HNRNPR "Heterogeneous nuclear r...   180  6.5e-13   1
ZFIN|ZDB-GENE-030131-4862 - symbol:syncrip "synaptotagmin...   181  6.5e-13   1
UNIPROTKB|I3LKZ4 - symbol:HNRNPR "Uncharacterized protein...   180  6.6e-13   1
UNIPROTKB|E2QVD3 - symbol:SYNCRIP "Uncharacterized protei...   180  7.0e-13   1
UNIPROTKB|O60506 - symbol:SYNCRIP "Heterogeneous nuclear ...   180  7.1e-13   1
MGI|MGI:1891690 - symbol:Syncrip "synaptotagmin binding, ...   180  7.1e-13   1
UNIPROTKB|F2Z5D4 - symbol:SYNCRIP "Uncharacterized protei...   180  7.1e-13   1
RGD|631348 - symbol:Hnrnpr "heterogeneous nuclear ribonuc...   180  7.2e-13   1
UNIPROTKB|Q566E4 - symbol:Hnrnpr "Heterogeneous nuclear r...   180  7.2e-13   1
UNIPROTKB|A3KMV6 - symbol:HNRNPR "Uncharacterized protein...   180  7.3e-13   1
UNIPROTKB|E2RE36 - symbol:HNRNPR "Uncharacterized protein...   180  7.3e-13   1
UNIPROTKB|O43390 - symbol:HNRNPR "Heterogeneous nuclear r...   180  7.3e-13   1
UNIPROTKB|F1MCT8 - symbol:SYNCRIP "Uncharacterized protei...   180  7.3e-13   1
UNIPROTKB|E1BZR1 - symbol:HNRNPR "Uncharacterized protein...   180  7.8e-13   1
ZFIN|ZDB-GENE-030131-3104 - symbol:syncripl "synaptotagmi...   171  5.5e-12   1


>FB|FBgn0038826 [details] [associations]
            symbol:Syp "Syncrip" species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS;IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0071011 "precatalytic
            spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
            [GO:0046011 "regulation of oskar mRNA translation" evidence=IMP]
            [GO:0007310 "oocyte dorsal/ventral axis specification"
            evidence=IMP] [GO:0046843 "dorsal appendage formation"
            evidence=IMP] [GO:0035770 "ribonucleoprotein granule" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:AE014297 GO:GO:0022008 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0071011
            GO:GO:0000398 UniGene:Dm.11889 GeneID:42460 KEGG:dme:Dmel_CG17838
            FlyBase:FBgn0038826 ChiTaRS:CG17838 GenomeRNAi:42460 NextBio:828899
            RefSeq:NP_650913.2 ProteinModelPortal:Q7KSA0 SMR:Q7KSA0
            STRING:Q7KSA0 EnsemblMetazoa:FBtr0083959 UCSC:CG17838-RB
            InParanoid:Q7KSA0 OMA:QPLGTNG Bgee:Q7KSA0 Uniprot:Q7KSA0
        Length = 711

 Score = 231 (86.4 bits), Expect = 2.9e-18, P = 2.9e-18
 Identities = 45/65 (69%), Positives = 55/65 (84%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+P +GA+ VL QFLESNLEHVSNKSA+LCG+MKTYRQKSR+   GVA+ +   T+KGPD
Sbjct:    68 EFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAAPA---TVKGPD 124

Query:    94 EEKIK 98
             E+KIK
Sbjct:   125 EDKIK 129


>UNIPROTKB|F6UXX1 [details] [associations]
            symbol:SYNCRIP "Heterogeneous nuclear ribonucleoprotein Q"
            species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0071204
            "histone pre-mRNA 3'end processing complex" evidence=IEA]
            GO:GO:0005737 EMBL:AL589666 GO:GO:0008143 GO:GO:0071204
            EMBL:AL136082 IPI:IPI00402184 HGNC:HGNC:16918 ChiTaRS:SYNCRIP
            ProteinModelPortal:F6UXX1 PRIDE:F6UXX1 Ensembl:ENST00000444272
            ArrayExpress:F6UXX1 Bgee:F6UXX1 Uniprot:F6UXX1
        Length = 185

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    67 EFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 120

Query:    94 EEKIK 98
             E KIK
Sbjct:   121 EAKIK 125


>ZFIN|ZDB-GENE-040426-2766 [details] [associations]
            symbol:hnrnpr "heterogeneous nuclear
            ribonucleoprotein R" species:7955 "Danio rerio" [GO:0048846 "axon
            extension involved in axon guidance" evidence=IMP] [GO:0003729
            "mRNA binding" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] ZFIN:ZDB-GENE-040426-2766 eggNOG:NOG258596
            GO:GO:0003729 GeneTree:ENSGT00550000074366 GO:GO:0030529
            EMBL:CU633999 GO:GO:0048846 CTD:10236 EMBL:BC053413 IPI:IPI00490815
            RefSeq:NP_998591.1 UniGene:Dr.77719 Ensembl:ENSDART00000027864
            GeneID:406735 KEGG:dre:406735 HOGENOM:HOG000202208
            HOVERGEN:HBG097909 OMA:PDERACE NextBio:20818254 Uniprot:Q7SZC9
        Length = 214

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 38/65 (58%), Positives = 46/65 (70%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G   V  +S     KGPD
Sbjct:    75 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGNK-VQESS-----KGPD 128

Query:    94 EEKIK 98
             E KIK
Sbjct:   129 ETKIK 133


>UNIPROTKB|F1NZU2 [details] [associations]
            symbol:SYNCRIP "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GeneTree:ENSGT00550000074366
            GO:GO:0003676 EMBL:AADN02002396 IPI:IPI00570859
            Ensembl:ENSGALT00000025521 ArrayExpress:F1NZU2 Uniprot:F1NZU2
        Length = 447

 Score = 183 (69.5 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 39/65 (60%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    66 EFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 119

Query:    94 EEKIK 98
             E KIK
Sbjct:   120 EAKIK 124


>UNIPROTKB|F1LUZ6 [details] [associations]
            symbol:Hnrnpr "Protein Hnrnpr" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:631348 GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0003676
            IPI:IPI00391659 ProteinModelPortal:F1LUZ6
            Ensembl:ENSRNOT00000015971 OMA:MENVERT ArrayExpress:F1LUZ6
            Uniprot:F1LUZ6
        Length = 381

 Score = 180 (68.4 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    39 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 92

Query:    94 EEKIK 98
             E KIK
Sbjct:    93 EAKIK 97


>UNIPROTKB|F1NWI9 [details] [associations]
            symbol:SYNCRIP "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0070934
            "CRD-mediated mRNA stabilization" evidence=IEA] [GO:0070937
            "CRD-mediated mRNA stability complex" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA] [GO:0071204 "histone
            pre-mRNA 3'end processing complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0071013
            GO:GO:0008143 GO:GO:0070937 GO:GO:0070934 GO:GO:0071204 OMA:GNMATEH
            EMBL:AADN02002396 IPI:IPI00680994 Ensembl:ENSGALT00000031678
            ArrayExpress:F1NWI9 Uniprot:F1NWI9
        Length = 622

 Score = 183 (69.5 bits), Expect = 3.3e-13, P = 3.3e-13
 Identities = 39/65 (60%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    66 EFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 119

Query:    94 EEKIK 98
             E KIK
Sbjct:   120 EAKIK 124


>UNIPROTKB|F6XIK8 [details] [associations]
            symbol:SYNCRIP "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0003676
            CTD:10492 KO:K13160 OMA:GNMATEH Ensembl:ENSCAFT00000004869
            EMBL:AAEX03008501 RefSeq:XP_003431698.1 ProteinModelPortal:F6XIK8
            GeneID:474986 KEGG:cfa:474986 Uniprot:F6XIK8
        Length = 562

 Score = 180 (68.4 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    67 EFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 120

Query:    94 EEKIK 98
             E KIK
Sbjct:   121 EAKIK 125


>UNIPROTKB|Q2L7G6 [details] [associations]
            symbol:HNRNPR "Heterogeneous nuclear ribonucleoprotein R"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 HOVERGEN:HBG051917
            Gene3D:3.30.70.330 InterPro:IPR006535 TIGRFAMs:TIGR01648
            GO:GO:0003676 GO:GO:0030529 EMBL:AL109936 UniGene:Hs.373763
            HGNC:HGNC:5047 ChiTaRS:HNRNPR EMBL:DQ351905 IPI:IPI00856038
            SMR:Q2L7G6 STRING:Q2L7G6 Ensembl:ENST00000427764 UCSC:uc010odw.2
            Uniprot:Q2L7G6
        Length = 595

 Score = 180 (68.4 bits), Expect = 6.5e-13, P = 6.5e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    70 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 123

Query:    94 EEKIK 98
             E KIK
Sbjct:   124 EAKIK 128


>ZFIN|ZDB-GENE-030131-4862 [details] [associations]
            symbol:syncrip "synaptotagmin binding, cytoplasmic
            RNA interacting protein" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-4862 GO:GO:0000166 Gene3D:3.30.70.330
            InterPro:IPR006535 TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366
            GO:GO:0003676 EMBL:CT573058 IPI:IPI00504625
            Ensembl:ENSDART00000129870 Bgee:F1QY96 Uniprot:F1QY96
        Length = 694

 Score = 181 (68.8 bits), Expect = 6.5e-13, P = 6.5e-13
 Identities = 39/65 (60%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA+ VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G   V ST      KGPD
Sbjct:   131 EFNEEGALQVLIQFKESDLSHVQNKSAFLCGVMKTYRQREKQGTKVVEST------KGPD 184

Query:    94 EEKIK 98
             E KIK
Sbjct:   185 EAKIK 189


>UNIPROTKB|I3LKZ4 [details] [associations]
            symbol:HNRNPR "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0003676
            OMA:YYPPPRM Ensembl:ENSSSCT00000026418 Uniprot:I3LKZ4
        Length = 599

 Score = 180 (68.4 bits), Expect = 6.6e-13, P = 6.6e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    70 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 123

Query:    94 EEKIK 98
             E KIK
Sbjct:   124 EAKIK 128


>UNIPROTKB|E2QVD3 [details] [associations]
            symbol:SYNCRIP "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GO:GO:0003676 ProteinModelPortal:E2QVD3
            Ensembl:ENSCAFT00000004869 Uniprot:E2QVD3
        Length = 622

 Score = 180 (68.4 bits), Expect = 7.0e-13, P = 7.0e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    67 EFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 120

Query:    94 EEKIK 98
             E KIK
Sbjct:   121 EAKIK 125


>UNIPROTKB|O60506 [details] [associations]
            symbol:SYNCRIP "Heterogeneous nuclear ribonucleoprotein Q"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0071204 "histone pre-mRNA 3'end processing
            complex" evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability
            complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
            stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0017148 "negative regulation of translation"
            evidence=IDA;IMP] [GO:0071346 "cellular response to
            interferon-gamma" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0006396 "RNA
            processing" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005783 GO:GO:0019048 GO:GO:0005654 GO:GO:0017148
            GO:GO:0000166 EMBL:CH471051 eggNOG:NOG258596 HOVERGEN:HBG051917
            Gene3D:3.30.70.330 InterPro:IPR006535 TIGRFAMs:TIGR01648
            GO:GO:0003723 GO:GO:0071346 GO:GO:0000398 GO:GO:0071013
            GO:GO:0008143 GO:GO:0070937 GO:GO:0070934 GO:GO:0071204
            EMBL:AF155568 EMBL:AF037448 EMBL:AY034481 EMBL:AY034482
            EMBL:AY034483 EMBL:AK222776 EMBL:AL136082 EMBL:BC015575
            EMBL:BC032643 EMBL:BC040844 IPI:IPI00018140 IPI:IPI00402182
            IPI:IPI00402183 IPI:IPI00402184 IPI:IPI00402185
            RefSeq:NP_001153145.1 RefSeq:NP_001153146.1 RefSeq:NP_001153147.1
            RefSeq:NP_001153148.1 RefSeq:NP_001153149.1 RefSeq:NP_001240700.1
            RefSeq:NP_006363.4 UniGene:Hs.571177 PDB:2DGU PDBsum:2DGU
            ProteinModelPortal:O60506 SMR:O60506 IntAct:O60506
            MINT:MINT-2796763 STRING:O60506 PhosphoSite:O60506 PaxDb:O60506
            PRIDE:O60506 DNASU:10492 Ensembl:ENST00000355238
            Ensembl:ENST00000369622 GeneID:10492 KEGG:hsa:10492 UCSC:uc003pku.3
            UCSC:uc003pkv.3 UCSC:uc003pkw.3 UCSC:uc003pkx.3 UCSC:uc003pkz.2
            CTD:10492 GeneCards:GC06M086267 HGNC:HGNC:16918 HPA:CAB010895
            neXtProt:NX_O60506 PharmGKB:PA134985065 InParanoid:O60506 KO:K13160
            OMA:GNMATEH OrthoDB:EOG4FN4HM PhylomeDB:O60506 ChiTaRS:SYNCRIP
            EvolutionaryTrace:O60506 GenomeRNAi:10492 NextBio:39814
            ArrayExpress:O60506 Bgee:O60506 CleanEx:HS_SYNCRIP
            Genevestigator:O60506 GermOnline:ENSG00000135316 Uniprot:O60506
        Length = 623

 Score = 180 (68.4 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    67 EFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 120

Query:    94 EEKIK 98
             E KIK
Sbjct:   121 EAKIK 125


>MGI|MGI:1891690 [details] [associations]
            symbol:Syncrip "synaptotagmin binding, cytoplasmic RNA
            interacting protein" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008143 "poly(A)
            RNA binding" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0070934
            "CRD-mediated mRNA stabilization" evidence=ISO] [GO:0070937
            "CRD-mediated mRNA stability complex" evidence=ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISO] [GO:0071204 "histone
            pre-mRNA 3'end processing complex" evidence=IDA] [GO:0071346
            "cellular response to interferon-gamma" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1891690 GO:GO:0008380 GO:GO:0000166
            eggNOG:NOG258596 HOVERGEN:HBG051917 GO:GO:0006397
            Gene3D:3.30.70.330 InterPro:IPR006535 TIGRFAMs:TIGR01648
            GeneTree:ENSGT00550000074366 GO:GO:0071013 GO:GO:0008143
            GO:GO:0070937 GO:GO:0070934 GO:GO:0071204 CTD:10492 KO:K13160
            OMA:GNMATEH OrthoDB:EOG4FN4HM EMBL:AF093821 EMBL:AB035725
            EMBL:AK034845 EMBL:AK077588 EMBL:AK078158 EMBL:BC004001
            EMBL:BC041148 EMBL:BC050079 EMBL:BC055863 EMBL:BC058807
            EMBL:BC080309 EMBL:BC108363 EMBL:AF408434 IPI:IPI00406117
            IPI:IPI00406118 RefSeq:NP_062640.2 RefSeq:NP_062770.1
            UniGene:Mm.260545 ProteinModelPortal:Q7TMK9 SMR:Q7TMK9
            STRING:Q7TMK9 PhosphoSite:Q7TMK9 REPRODUCTION-2DPAGE:IPI00406117
            PaxDb:Q7TMK9 PRIDE:Q7TMK9 Ensembl:ENSMUST00000069221
            Ensembl:ENSMUST00000173801 Ensembl:ENSMUST00000174282 GeneID:56403
            KEGG:mmu:56403 UCSC:uc009qyo.1 UCSC:uc009qyq.1 InParanoid:Q7TMK9
            NextBio:312520 Bgee:Q7TMK9 Genevestigator:Q7TMK9
            GermOnline:ENSMUSG00000032423 Uniprot:Q7TMK9
        Length = 623

 Score = 180 (68.4 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    67 EFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 120

Query:    94 EEKIK 98
             E KIK
Sbjct:   121 EAKIK 125


>UNIPROTKB|F2Z5D4 [details] [associations]
            symbol:SYNCRIP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071204 "histone pre-mRNA 3'end processing complex"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0070937 "CRD-mediated mRNA stability complex"
            evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0071013
            GO:GO:0008143 GO:GO:0070937 GO:GO:0070934 GO:GO:0071204 OMA:GNMATEH
            EMBL:CU076072 Ensembl:ENSSSCT00000004748 Uniprot:F2Z5D4
        Length = 627

 Score = 180 (68.4 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    71 EFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 124

Query:    94 EEKIK 98
             E KIK
Sbjct:   125 EAKIK 129


>RGD|631348 [details] [associations]
            symbol:Hnrnpr "heterogeneous nuclear ribonucleoprotein R"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:631348 GO:GO:0000166
            HOVERGEN:HBG051917 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GO:GO:0003676 GO:GO:0030529 HSSP:O08583
            IPI:IPI00194562 UniGene:Rn.195396 EMBL:AY184814
            ProteinModelPortal:Q811S1 SMR:Q811S1 STRING:Q811S1 PRIDE:Q811S1
            UCSC:RGD:631348 InParanoid:Q811S1 Genevestigator:Q811S1
            Uniprot:Q811S1
        Length = 632

 Score = 180 (68.4 bits), Expect = 7.2e-13, P = 7.2e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    70 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 123

Query:    94 EEKIK 98
             E KIK
Sbjct:   124 EAKIK 128


>UNIPROTKB|Q566E4 [details] [associations]
            symbol:Hnrnpr "Heterogeneous nuclear ribonucleoprotein R"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:631348 GO:GO:0000166 eggNOG:NOG258596
            HOVERGEN:HBG051917 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GO:GO:0003676 GO:GO:0071013 OrthoDB:EOG4FN4HM
            HOGENOM:HOG000186082 CTD:10236 KO:K13161 EMBL:BC093598
            IPI:IPI00194562 RefSeq:NP_783193.2 UniGene:Rn.195396 SMR:Q566E4
            STRING:Q566E4 Ensembl:ENSRNOT00000016001 GeneID:319110
            KEGG:rno:319110 InParanoid:Q566E4 NextBio:672099
            Genevestigator:Q566E4 Uniprot:Q566E4
        Length = 632

 Score = 180 (68.4 bits), Expect = 7.2e-13, P = 7.2e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    70 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 123

Query:    94 EEKIK 98
             E KIK
Sbjct:   124 EAKIK 128


>UNIPROTKB|A3KMV6 [details] [associations]
            symbol:HNRNPR "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 eggNOG:NOG258596 HOVERGEN:HBG051917
            Gene3D:3.30.70.330 InterPro:IPR006535 TIGRFAMs:TIGR01648
            GeneTree:ENSGT00550000074366 GO:GO:0003676 GO:GO:0071013
            OrthoDB:EOG4FN4HM HOGENOM:HOG000186082 CTD:10236 KO:K13161
            OMA:YYPPPRM EMBL:DAAA02006438 EMBL:BC133299 IPI:IPI00704335
            RefSeq:NP_001076077.1 UniGene:Bt.3687 SMR:A3KMV6 STRING:A3KMV6
            Ensembl:ENSBTAT00000022054 GeneID:512479 KEGG:bta:512479
            InParanoid:A3KMV6 NextBio:20870409 Uniprot:A3KMV6
        Length = 633

 Score = 180 (68.4 bits), Expect = 7.3e-13, P = 7.3e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    70 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 123

Query:    94 EEKIK 98
             E KIK
Sbjct:   124 EAKIK 128


>UNIPROTKB|E2RE36 [details] [associations]
            symbol:HNRNPR "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0003676
            GO:GO:0071013 CTD:10236 KO:K13161 OMA:YYPPPRM EMBL:AAEX03001757
            RefSeq:XP_852945.1 ProteinModelPortal:E2RE36
            Ensembl:ENSCAFT00000021145 GeneID:478192 KEGG:cfa:478192
            Uniprot:E2RE36
        Length = 633

 Score = 180 (68.4 bits), Expect = 7.3e-13, P = 7.3e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    70 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 123

Query:    94 EEKIK 98
             E KIK
Sbjct:   124 EAKIK 128


>UNIPROTKB|O43390 [details] [associations]
            symbol:HNRNPR "Heterogeneous nuclear ribonucleoprotein R"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IDA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC;TAS] [GO:0005654 "nucleoplasm"
            evidence=IDA;TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0003723
            "RNA binding" evidence=NAS] [GO:0005681 "spliceosomal complex"
            evidence=NAS] [GO:0006397 "mRNA processing" evidence=NAS]
            [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] Reactome:REACT_71
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166
            eggNOG:NOG258596 HOVERGEN:HBG051917 Reactome:REACT_1675
            Gene3D:3.30.70.330 InterPro:IPR006535 TIGRFAMs:TIGR01648
            GO:GO:0003723 GO:GO:0000398 GO:GO:0071013 HOGENOM:HOG000186082
            EMBL:AF000364 EMBL:AL109936 EMBL:BC001449 IPI:IPI00012074
            IPI:IPI00941649 PIR:T02673 RefSeq:NP_001095867.1
            RefSeq:NP_001095868.1 RefSeq:NP_005817.1 UniGene:Hs.373763 PDB:2DK2
            PDBsum:2DK2 ProteinModelPortal:O43390 SMR:O43390 IntAct:O43390
            MINT:MINT-2796101 STRING:O43390 PhosphoSite:O43390 PaxDb:O43390
            PeptideAtlas:O43390 PRIDE:O43390 DNASU:10236
            Ensembl:ENST00000302271 Ensembl:ENST00000374612
            Ensembl:ENST00000374616 GeneID:10236 KEGG:hsa:10236 UCSC:uc001bgp.4
            UCSC:uc001bgr.4 CTD:10236 GeneCards:GC01M023630 HGNC:HGNC:5047
            HPA:CAB011687 HPA:HPA026092 MIM:607201 neXtProt:NX_O43390
            PharmGKB:PA162391459 KO:K13161 OMA:YYPPPRM PhylomeDB:O43390
            ChiTaRS:HNRNPR EvolutionaryTrace:O43390 GenomeRNAi:10236
            NextBio:38770 PMAP-CutDB:O43390 ArrayExpress:O43390 Bgee:O43390
            CleanEx:HS_HNRNPR Genevestigator:O43390 GermOnline:ENSG00000125944
            Uniprot:O43390
        Length = 633

 Score = 180 (68.4 bits), Expect = 7.3e-13, P = 7.3e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    70 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 123

Query:    94 EEKIK 98
             E KIK
Sbjct:   124 EAKIK 128


>UNIPROTKB|F1MCT8 [details] [associations]
            symbol:SYNCRIP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071204 "histone pre-mRNA 3'end processing complex"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0070937 "CRD-mediated mRNA stability complex"
            evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0071013
            GO:GO:0008143 GO:GO:0070937 GO:GO:0070934 GO:GO:0071204 OMA:GNMATEH
            EMBL:DAAA02026516 EMBL:DAAA02026515 IPI:IPI00721347
            Ensembl:ENSBTAT00000008774 Uniprot:F1MCT8
        Length = 638

 Score = 180 (68.4 bits), Expect = 7.3e-13, P = 7.3e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  +GA+AVL QF +S+L HV NKSAFLCG+MKTYRQ+ + G   VA +S     KGPD
Sbjct:    82 EFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTK-VADSS-----KGPD 135

Query:    94 EEKIK 98
             E KIK
Sbjct:   136 EAKIK 140


>UNIPROTKB|E1BZR1 [details] [associations]
            symbol:HNRNPR "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 InterPro:IPR006535
            TIGRFAMs:TIGR01648 GeneTree:ENSGT00550000074366 GO:GO:0003676
            GO:GO:0071013 OMA:YYPPPRM EMBL:AADN02051307 EMBL:AADN02051308
            IPI:IPI00597410 ProteinModelPortal:E1BZR1
            Ensembl:ENSGALT00000001185 ArrayExpress:E1BZR1 Uniprot:E1BZR1
        Length = 661

 Score = 180 (68.4 bits), Expect = 7.8e-13, P = 7.8e-13
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA++VL QF ES+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    98 EFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQEST------KGPD 151

Query:    94 EEKIK 98
             E KIK
Sbjct:   152 EAKIK 156


>ZFIN|ZDB-GENE-030131-3104 [details] [associations]
            symbol:syncripl "synaptotagmin binding,
            cytoplasmic RNA interacting protein, like" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-3104
            GO:GO:0000166 HOVERGEN:HBG051917 Gene3D:3.30.70.330
            InterPro:IPR006535 TIGRFAMs:TIGR01648 GO:GO:0003676 HSSP:P09651
            EMBL:BC046902 IPI:IPI00513002 RefSeq:NP_955973.1 UniGene:Dr.78854
            ProteinModelPortal:Q802X5 SMR:Q802X5 STRING:Q802X5 GeneID:324384
            KEGG:dre:324384 CTD:324384 InParanoid:Q802X5 NextBio:20808747
            Uniprot:Q802X5
        Length = 560

 Score = 171 (65.3 bits), Expect = 5.5e-12, P = 5.5e-12
 Identities = 37/65 (56%), Positives = 44/65 (67%)

Query:    34 EYPSEGAIAVLNQFLESNLEHVSNKSAFLCGIMKTYRQKSRSGMAGVASTSAVLTLKGPD 93
             E+  EGA+ VL QF +S+L HV NKSAFLCG+MKTYRQ+ + G     ST      KGPD
Sbjct:    68 EFNEEGALQVLLQFRDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVSDST------KGPD 121

Query:    94 EEKIK 98
             E KIK
Sbjct:   122 EAKIK 126


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      108        92   0.00091  102 3  11 22  0.37    30
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  22
  No. of states in DFA:  510 (54 KB)
  Total size of DFA:  94 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  8.78u 0.07s 8.85t   Elapsed:  00:00:20
  Total cpu time:  8.79u 0.07s 8.86t   Elapsed:  00:00:21
  Start:  Thu Aug 15 14:01:00 2013   End:  Thu Aug 15 14:01:21 2013

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