Query psy11923
Match_columns 492
No_of_seqs 217 out of 2207
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 22:26:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202|consensus 100.0 2E-83 4.3E-88 657.5 33.5 469 1-488 201-851 (972)
2 KOG0204|consensus 100.0 4.6E-76 1E-80 602.6 29.5 430 1-453 294-857 (1034)
3 PRK10517 magnesium-transportin 100.0 1.9E-74 4.2E-79 636.3 42.4 413 1-453 250-754 (902)
4 TIGR01524 ATPase-IIIB_Mg magne 100.0 2.9E-73 6.2E-78 627.3 43.8 412 1-453 216-719 (867)
5 PRK15122 magnesium-transportin 100.0 4.1E-73 9E-78 626.7 43.3 414 1-453 249-754 (903)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 6.9E-73 1.5E-77 633.0 43.2 423 1-453 223-802 (997)
7 COG0474 MgtA Cation transport 100.0 1.6E-73 3.5E-78 630.7 37.0 411 1-451 226-756 (917)
8 TIGR01517 ATPase-IIB_Ca plasma 100.0 1.7E-72 3.6E-77 628.2 43.5 413 1-453 240-787 (941)
9 COG2217 ZntA Cation transport 100.0 2.6E-72 5.6E-77 594.2 30.0 376 2-418 284-682 (713)
10 TIGR01647 ATPase-IIIA_H plasma 100.0 3.5E-70 7.6E-75 595.5 43.7 390 1-453 164-650 (755)
11 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.2E-69 2.6E-74 601.8 44.1 404 1-453 203-736 (884)
12 TIGR01523 ATPase-IID_K-Na pota 100.0 1.5E-69 3.2E-74 604.9 43.3 422 1-454 205-870 (1053)
13 KOG0203|consensus 100.0 2.7E-72 5.8E-77 574.3 16.4 443 2-454 246-825 (1019)
14 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.6E-68 5.7E-73 592.4 42.8 421 1-453 158-748 (917)
15 KOG0207|consensus 100.0 9E-68 2E-72 548.9 15.4 371 3-413 452-863 (951)
16 TIGR01657 P-ATPase-V P-type AT 100.0 9.7E-64 2.1E-68 562.8 34.9 425 3-453 329-915 (1054)
17 PRK14010 potassium-transportin 100.0 3.3E-61 7.1E-66 509.5 36.8 408 1-477 179-661 (673)
18 PRK01122 potassium-transportin 100.0 8.3E-60 1.8E-64 499.2 39.4 407 1-477 179-665 (679)
19 PRK11033 zntA zinc/cadmium/mer 100.0 1.5E-59 3.2E-64 510.6 31.2 374 1-417 314-710 (741)
20 TIGR01497 kdpB K+-transporting 100.0 1.6E-56 3.6E-61 473.0 37.7 408 1-477 180-666 (675)
21 TIGR01511 ATPase-IB1_Cu copper 100.0 1.1E-56 2.4E-61 475.6 29.8 368 1-416 163-547 (562)
22 TIGR01652 ATPase-Plipid phosph 100.0 1E-56 2.2E-61 507.3 28.5 423 4-449 214-885 (1057)
23 PRK10671 copA copper exporting 100.0 4.1E-56 8.9E-61 492.6 30.9 375 1-416 394-793 (834)
24 PLN03190 aminophospholipid tra 100.0 1E-55 2.2E-60 495.1 28.1 452 4-477 296-1037(1178)
25 TIGR01512 ATPase-IB2_Cd heavy 100.0 6.2E-55 1.3E-59 460.7 28.0 371 1-417 126-508 (536)
26 TIGR01525 ATPase-IB_hvy heavy 100.0 2E-54 4.4E-59 459.5 29.2 378 1-418 127-530 (556)
27 TIGR01494 ATPase_P-type ATPase 100.0 1.7E-52 3.6E-57 440.6 36.7 333 2-417 106-483 (499)
28 KOG0208|consensus 100.0 7E-52 1.5E-56 430.5 23.9 428 2-449 348-962 (1140)
29 KOG0206|consensus 100.0 3.6E-50 7.8E-55 436.6 10.0 451 4-477 243-960 (1151)
30 KOG0205|consensus 100.0 2.1E-48 4.6E-53 388.2 21.7 430 2-485 207-742 (942)
31 KOG0210|consensus 100.0 1.5E-44 3.3E-49 362.4 14.1 425 1-475 286-944 (1051)
32 COG2216 KdpB High-affinity K+ 100.0 6.9E-42 1.5E-46 334.6 25.6 408 1-476 179-666 (681)
33 KOG0209|consensus 100.0 6.6E-35 1.4E-39 298.2 14.5 255 3-279 359-715 (1160)
34 PF00702 Hydrolase: haloacid d 99.8 4.8E-21 1E-25 179.5 9.7 190 122-352 1-214 (215)
35 PF00122 E1-E2_ATPase: E1-E2 A 99.6 4.6E-15 9.9E-20 140.8 12.5 118 1-118 111-230 (230)
36 COG4087 Soluble P-type ATPase 98.8 2.7E-08 5.8E-13 81.7 9.7 129 227-388 18-147 (152)
37 TIGR00338 serB phosphoserine p 98.1 1.4E-05 2.9E-10 75.1 8.7 120 239-386 85-218 (219)
38 TIGR02726 phenyl_P_delta pheny 98.1 3E-05 6.4E-10 69.4 10.0 111 246-388 41-155 (169)
39 TIGR01670 YrbI-phosphatas 3-de 98.0 4.6E-05 9.9E-10 67.4 9.7 124 227-388 22-149 (154)
40 PRK11133 serB phosphoserine ph 98.0 2.2E-05 4.8E-10 77.7 8.5 122 239-388 181-316 (322)
41 COG1778 Low specificity phosph 97.9 0.00016 3.5E-09 62.0 11.3 74 246-332 42-115 (170)
42 TIGR02137 HSK-PSP phosphoserin 97.9 6.6E-05 1.4E-09 69.5 8.9 119 239-390 68-198 (203)
43 PRK09484 3-deoxy-D-manno-octul 97.6 0.00053 1.1E-08 62.4 9.9 114 246-391 55-172 (183)
44 COG0560 SerB Phosphoserine pho 97.5 0.00035 7.5E-09 65.1 8.6 115 238-377 76-201 (212)
45 PRK01158 phosphoglycolate phos 97.5 0.0008 1.7E-08 63.5 10.0 147 240-388 21-226 (230)
46 TIGR01487 SPP-like sucrose-pho 97.3 0.00084 1.8E-08 62.8 8.4 145 239-385 18-213 (215)
47 COG0561 Cof Predicted hydrolas 97.3 0.002 4.3E-08 62.2 10.7 49 339-389 211-259 (264)
48 KOG1615|consensus 97.2 0.0008 1.7E-08 59.8 5.9 44 239-282 88-131 (227)
49 PRK15126 thiamin pyrimidine py 97.1 0.0028 6.1E-08 61.5 9.9 41 239-279 19-59 (272)
50 PRK10513 sugar phosphate phosp 97.0 0.0041 8.8E-08 60.3 10.0 49 338-388 217-265 (270)
51 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.0 0.0017 3.8E-08 59.7 6.9 42 239-280 80-121 (201)
52 TIGR01482 SPP-subfamily Sucros 97.0 0.0049 1.1E-07 57.9 9.6 142 239-382 15-212 (225)
53 PRK10976 putative hydrolase; P 97.0 0.004 8.7E-08 60.2 9.2 41 239-279 19-59 (266)
54 PRK10530 pyridoxal phosphate ( 96.6 0.015 3.2E-07 56.3 10.5 49 338-388 220-268 (272)
55 PRK08238 hypothetical protein; 96.6 0.022 4.8E-07 59.6 12.2 40 239-278 72-111 (479)
56 PLN02954 phosphoserine phospha 96.6 0.018 3.8E-07 54.1 10.2 42 239-280 84-125 (224)
57 PRK13582 thrH phosphoserine ph 96.6 0.017 3.8E-07 53.2 10.0 40 239-279 68-107 (205)
58 PF12710 HAD: haloacid dehalog 96.5 0.006 1.3E-07 55.5 6.4 40 242-281 92-131 (192)
59 TIGR01454 AHBA_synth_RP 3-amin 96.4 0.02 4.3E-07 52.9 9.1 42 238-279 74-115 (205)
60 PRK13222 phosphoglycolate phos 96.3 0.023 5.1E-07 53.2 9.3 42 238-279 92-133 (226)
61 PF08282 Hydrolase_3: haloacid 96.2 0.018 3.8E-07 54.5 8.0 47 338-386 207-253 (254)
62 TIGR00099 Cof-subfamily Cof su 96.2 0.018 3.8E-07 55.4 7.9 46 338-385 209-254 (256)
63 KOG4383|consensus 96.0 0.07 1.5E-06 56.1 11.3 54 226-279 813-866 (1354)
64 COG0546 Gph Predicted phosphat 95.9 0.047 1E-06 51.2 9.1 122 237-388 87-218 (220)
65 TIGR01488 HAD-SF-IB Haloacid D 95.6 0.052 1.1E-06 48.6 7.9 40 240-279 74-113 (177)
66 TIGR03333 salvage_mtnX 2-hydro 95.5 0.067 1.5E-06 49.9 8.7 40 238-277 69-108 (214)
67 cd01427 HAD_like Haloacid deha 95.5 0.043 9.2E-07 46.2 6.8 44 235-278 20-63 (139)
68 TIGR01490 HAD-SF-IB-hyp1 HAD-s 95.4 0.022 4.8E-07 52.4 4.8 44 237-280 85-128 (202)
69 TIGR01449 PGP_bact 2-phosphogl 95.3 0.064 1.4E-06 49.7 7.8 41 239-279 85-125 (213)
70 TIGR01544 HAD-SF-IE haloacid d 95.2 0.18 3.9E-06 48.7 10.5 42 238-279 120-161 (277)
71 PRK13223 phosphoglycolate phos 95.1 0.099 2.1E-06 50.8 8.6 42 238-279 100-141 (272)
72 PRK13288 pyrophosphatase PpaX; 94.9 0.15 3.2E-06 47.4 8.9 42 239-280 82-123 (214)
73 PRK10826 2-deoxyglucose-6-phos 94.5 0.22 4.8E-06 46.5 9.1 43 238-280 91-133 (222)
74 PRK13225 phosphoglycolate phos 94.5 0.14 2.9E-06 49.8 7.8 42 239-280 142-183 (273)
75 PF00689 Cation_ATPase_C: Cati 94.3 0.015 3.2E-07 52.7 0.6 31 424-454 1-31 (182)
76 TIGR01662 HAD-SF-IIIA HAD-supe 94.2 0.29 6.3E-06 41.5 8.5 42 239-280 25-74 (132)
77 TIGR03351 PhnX-like phosphonat 94.1 0.21 4.5E-06 46.6 8.1 42 238-279 86-127 (220)
78 TIGR01422 phosphonatase phosph 94.0 0.29 6.3E-06 46.8 8.8 41 239-279 99-139 (253)
79 PRK09552 mtnX 2-hydroxy-3-keto 93.9 0.21 4.7E-06 46.6 7.7 38 239-276 74-111 (219)
80 PRK13478 phosphonoacetaldehyde 93.8 0.47 1E-05 45.8 9.9 40 239-278 101-140 (267)
81 TIGR01489 DKMTPPase-SF 2,3-dik 93.7 0.22 4.8E-06 44.9 7.2 42 238-279 71-112 (188)
82 PRK13226 phosphoglycolate phos 93.4 0.34 7.3E-06 45.6 8.1 41 239-279 95-135 (229)
83 PRK11009 aphA acid phosphatase 93.0 0.3 6.5E-06 46.2 6.9 40 239-278 114-157 (237)
84 TIGR01428 HAD_type_II 2-haloal 92.9 0.63 1.4E-05 42.5 9.0 41 239-279 92-132 (198)
85 TIGR02471 sucr_syn_bact_C sucr 92.5 0.69 1.5E-05 43.7 8.8 47 340-388 182-232 (236)
86 TIGR01545 YfhB_g-proteo haloac 92.0 0.38 8.1E-06 44.7 6.2 39 239-277 94-133 (210)
87 PLN03243 haloacid dehalogenase 91.9 0.95 2.1E-05 43.6 9.0 41 239-279 109-149 (260)
88 PLN02887 hydrolase family prot 91.9 0.2 4.3E-06 53.7 4.7 47 340-388 530-576 (580)
89 TIGR01668 YqeG_hyp_ppase HAD s 91.8 0.68 1.5E-05 41.4 7.5 43 238-280 42-85 (170)
90 PRK11590 hypothetical protein; 91.6 0.48 1E-05 44.0 6.4 40 239-278 95-135 (211)
91 PF13419 HAD_2: Haloacid dehal 91.6 0.67 1.5E-05 40.7 7.2 83 237-329 75-163 (176)
92 TIGR01548 HAD-SF-IA-hyp1 haloa 91.5 0.78 1.7E-05 41.9 7.8 43 237-279 104-146 (197)
93 TIGR01685 MDP-1 magnesium-depe 91.4 1.2 2.5E-05 40.1 8.4 53 227-279 33-86 (174)
94 PHA02530 pseT polynucleotide k 91.3 3.7 8.1E-05 40.2 12.8 45 235-279 183-227 (300)
95 COG2179 Predicted hydrolase of 91.2 0.73 1.6E-05 40.5 6.6 73 240-325 47-119 (175)
96 TIGR01656 Histidinol-ppas hist 91.1 1.3 2.8E-05 38.5 8.4 41 239-279 27-82 (147)
97 PF13246 Hydrolase_like2: Puta 90.6 0.28 6.2E-06 38.9 3.3 45 117-165 46-90 (91)
98 PRK06769 hypothetical protein; 90.4 0.95 2.1E-05 40.6 7.0 27 240-266 29-55 (173)
99 COG4030 Uncharacterized protei 90.4 0.45 9.8E-06 43.7 4.7 159 239-400 83-275 (315)
100 PLN02770 haloacid dehalogenase 90.2 1.8 3.8E-05 41.3 9.1 41 239-279 108-148 (248)
101 TIGR01509 HAD-SF-IA-v3 haloaci 90.1 1.4 3E-05 39.3 7.9 40 239-279 85-124 (183)
102 TIGR01681 HAD-SF-IIIC HAD-supe 89.9 0.98 2.1E-05 38.3 6.3 39 239-277 29-68 (128)
103 TIGR01672 AphA HAD superfamily 89.8 0.94 2E-05 42.9 6.7 40 241-280 116-159 (237)
104 TIGR02253 CTE7 HAD superfamily 89.7 1.4 3E-05 40.9 7.8 41 239-279 94-134 (221)
105 PF13344 Hydrolase_6: Haloacid 89.3 0.23 5.1E-06 40.2 1.9 48 232-279 7-57 (101)
106 PLN02575 haloacid dehalogenase 88.8 2.6 5.7E-05 42.8 9.4 41 239-279 216-256 (381)
107 PRK06698 bifunctional 5'-methy 88.7 1.1 2.3E-05 47.1 6.9 41 239-279 330-370 (459)
108 PRK11587 putative phosphatase; 88.5 1.8 4E-05 40.2 7.7 40 239-278 83-122 (218)
109 PRK08942 D,D-heptose 1,7-bisph 88.2 3.2 6.8E-05 37.4 8.8 27 239-265 29-55 (181)
110 TIGR02009 PGMB-YQAB-SF beta-ph 88.1 1.7 3.6E-05 39.0 6.9 40 238-279 87-126 (185)
111 KOG0203|consensus 87.7 0.067 1.5E-06 57.9 -2.8 39 446-484 775-813 (1019)
112 TIGR01990 bPGM beta-phosphoglu 86.8 2.3 5.1E-05 38.0 7.1 39 239-279 87-125 (185)
113 TIGR01261 hisB_Nterm histidino 86.0 3.2 6.8E-05 36.8 7.3 41 239-279 29-84 (161)
114 PLN03190 aminophospholipid tra 85.9 1 2.2E-05 52.7 5.1 82 258-354 819-910 (1178)
115 PRK14988 GMP/IMP nucleotidase; 85.3 3.1 6.8E-05 38.9 7.4 41 239-279 93-133 (224)
116 PRK10444 UMP phosphatase; Prov 84.8 1.1 2.5E-05 42.7 4.2 45 232-276 10-54 (248)
117 PRK09449 dUMP phosphatase; Pro 84.4 3 6.6E-05 38.8 6.8 40 239-279 95-134 (224)
118 PLN02940 riboflavin kinase 84.3 3 6.5E-05 42.6 7.2 41 239-279 93-134 (382)
119 TIGR01486 HAD-SF-IIB-MPGP mann 84.1 2.3 4.9E-05 40.7 5.9 47 340-388 201-253 (256)
120 TIGR01458 HAD-SF-IIA-hyp3 HAD- 83.2 1.8 4E-05 41.5 4.8 48 232-279 10-64 (257)
121 TIGR02461 osmo_MPG_phos mannos 83.2 1.8 4E-05 40.6 4.7 43 237-279 13-55 (225)
122 TIGR01549 HAD-SF-IA-v1 haloaci 82.5 3.8 8.2E-05 35.5 6.3 39 237-275 62-100 (154)
123 PLN02645 phosphoglycolate phos 82.1 2 4.3E-05 42.6 4.7 48 232-279 37-87 (311)
124 PHA03398 viral phosphatase sup 81.6 2.5 5.3E-05 41.1 5.0 40 240-279 148-188 (303)
125 PRK05446 imidazole glycerol-ph 81.4 4.2 9.2E-05 40.9 6.8 42 238-279 29-85 (354)
126 TIGR02252 DREG-2 REG-2-like, H 81.2 6 0.00013 36.1 7.4 40 239-279 105-144 (203)
127 TIGR01684 viral_ppase viral ph 81.1 2.6 5.6E-05 40.9 4.9 41 240-280 146-187 (301)
128 PLN02779 haloacid dehalogenase 80.9 6 0.00013 38.6 7.6 38 239-276 144-181 (286)
129 TIGR01486 HAD-SF-IIB-MPGP mann 80.9 2.4 5.1E-05 40.6 4.7 40 240-279 17-56 (256)
130 PRK00192 mannosyl-3-phosphogly 80.1 2.4 5.2E-05 41.0 4.5 42 238-279 20-61 (273)
131 PRK09456 ?-D-glucose-1-phospha 79.7 5.4 0.00012 36.4 6.5 32 239-270 84-115 (199)
132 TIGR01457 HAD-SF-IIA-hyp2 HAD- 79.6 3.7 8E-05 39.2 5.5 48 232-279 10-60 (249)
133 PRK00192 mannosyl-3-phosphogly 78.2 3.7 8E-05 39.7 5.2 49 338-388 212-267 (273)
134 TIGR01459 HAD-SF-IIA-hyp4 HAD- 78.1 3.3 7.2E-05 39.2 4.7 49 232-280 17-67 (242)
135 PF00763 THF_DHG_CYH: Tetrahyd 77.9 1.5 3.3E-05 36.5 2.1 67 237-303 9-84 (117)
136 KOG3040|consensus 77.9 5.1 0.00011 36.6 5.4 52 229-280 13-67 (262)
137 TIGR01533 lipo_e_P4 5'-nucleot 77.7 8.5 0.00018 37.1 7.3 42 238-279 117-161 (266)
138 TIGR00213 GmhB_yaeD D,D-heptos 77.3 9.7 0.00021 34.0 7.3 27 240-266 27-53 (176)
139 PLN02811 hydrolase 75.8 10 0.00022 35.2 7.3 33 238-270 77-109 (220)
140 PRK14010 potassium-transportin 75.4 24 0.00051 38.9 10.8 61 317-378 459-529 (673)
141 TIGR02254 YjjG/YfnB HAD superf 75.3 15 0.00033 33.8 8.4 40 239-279 97-136 (224)
142 TIGR01691 enolase-ppase 2,3-di 75.2 12 0.00027 34.9 7.6 41 236-276 92-132 (220)
143 PRK14182 bifunctional 5,10-met 74.6 3.2 7E-05 40.2 3.5 68 236-303 9-85 (282)
144 PRK03669 mannosyl-3-phosphogly 74.5 1.2 2.6E-05 43.1 0.5 48 339-388 212-265 (271)
145 PRK14170 bifunctional 5,10-met 74.4 3.2 7E-05 40.2 3.5 68 236-303 10-86 (284)
146 PRK03669 mannosyl-3-phosphogly 73.8 5 0.00011 38.7 4.7 40 240-279 25-64 (271)
147 TIGR02463 MPGP_rel mannosyl-3- 72.4 5.1 0.00011 37.2 4.3 38 242-279 19-56 (221)
148 PRK14169 bifunctional 5,10-met 72.2 3.9 8.4E-05 39.7 3.4 68 236-303 9-85 (282)
149 PRK14194 bifunctional 5,10-met 71.4 4 8.7E-05 39.9 3.4 68 236-303 12-88 (301)
150 PRK14167 bifunctional 5,10-met 70.3 4.6 0.0001 39.5 3.5 68 236-303 10-86 (297)
151 PRK14175 bifunctional 5,10-met 69.7 4.8 0.0001 39.1 3.5 68 236-303 11-87 (286)
152 TIGR01686 FkbH FkbH-like domai 69.0 15 0.00033 36.4 7.1 88 239-336 31-123 (320)
153 smart00775 LNS2 LNS2 domain. T 68.4 5.1 0.00011 35.3 3.1 34 237-270 25-58 (157)
154 PRK14166 bifunctional 5,10-met 68.1 5.5 0.00012 38.6 3.5 67 236-302 9-84 (282)
155 PF09419 PGP_phosphatase: Mito 67.6 19 0.0004 32.1 6.5 43 237-279 57-108 (168)
156 smart00577 CPDc catalytic doma 67.4 8.5 0.00018 33.4 4.3 42 237-279 43-84 (148)
157 PRK14189 bifunctional 5,10-met 67.2 5.3 0.00011 38.8 3.2 68 236-303 11-87 (285)
158 PRK14180 bifunctional 5,10-met 67.2 5.8 0.00013 38.5 3.5 68 236-303 9-86 (282)
159 COG0647 NagD Predicted sugar p 66.8 7.9 0.00017 37.3 4.3 47 230-276 15-61 (269)
160 TIGR01675 plant-AP plant acid 66.4 23 0.00049 33.3 7.2 32 238-269 119-150 (229)
161 PRK12702 mannosyl-3-phosphogly 66.0 10 0.00022 37.0 4.9 41 239-279 18-58 (302)
162 PRK14174 bifunctional 5,10-met 65.5 6.3 0.00014 38.5 3.4 68 236-303 9-86 (295)
163 PRK14176 bifunctional 5,10-met 65.5 5.4 0.00012 38.8 2.9 69 235-303 15-93 (287)
164 PRK14184 bifunctional 5,10-met 65.2 6.5 0.00014 38.2 3.4 68 236-303 9-86 (286)
165 TIGR01452 PGP_euk phosphoglyco 64.6 8.2 0.00018 37.4 4.1 47 233-279 12-61 (279)
166 PLN02897 tetrahydrofolate dehy 64.5 6.8 0.00015 39.0 3.4 70 234-303 62-141 (345)
167 PRK14193 bifunctional 5,10-met 64.2 7.2 0.00016 37.8 3.5 68 236-303 11-87 (284)
168 PRK14186 bifunctional 5,10-met 64.2 6.9 0.00015 38.2 3.4 68 236-303 10-87 (297)
169 PRK14179 bifunctional 5,10-met 64.2 7 0.00015 38.0 3.4 68 236-303 10-87 (284)
170 PF13380 CoA_binding_2: CoA bi 63.9 9 0.0002 31.8 3.6 41 240-280 64-105 (116)
171 PRK14185 bifunctional 5,10-met 63.9 7.4 0.00016 37.9 3.5 68 236-303 9-86 (293)
172 KOG0202|consensus 63.4 6.3 0.00014 43.4 3.2 42 282-335 655-696 (972)
173 PRK14190 bifunctional 5,10-met 63.1 7.8 0.00017 37.7 3.5 68 236-303 11-87 (284)
174 TIGR01689 EcbF-BcbF capsule bi 62.9 7 0.00015 33.0 2.8 33 238-270 23-55 (126)
175 PRK14187 bifunctional 5,10-met 62.8 7.3 0.00016 38.0 3.3 68 236-303 10-87 (294)
176 PRK14191 bifunctional 5,10-met 61.5 8.4 0.00018 37.4 3.4 68 236-303 9-86 (285)
177 PLN02919 haloacid dehalogenase 61.4 34 0.00073 40.0 8.9 41 239-279 161-201 (1057)
178 TIGR01664 DNA-3'-Pase DNA 3'-p 61.4 12 0.00026 33.2 4.2 41 240-280 43-95 (166)
179 PRK14168 bifunctional 5,10-met 61.0 8.8 0.00019 37.5 3.5 68 236-303 11-88 (297)
180 PLN02616 tetrahydrofolate dehy 60.9 8.3 0.00018 38.6 3.3 69 234-302 79-157 (364)
181 PRK14183 bifunctional 5,10-met 60.4 9.4 0.0002 37.0 3.5 68 236-303 9-86 (281)
182 PRK14188 bifunctional 5,10-met 58.9 9.5 0.0002 37.4 3.3 67 236-302 10-86 (296)
183 TIGR01485 SPP_plant-cyano sucr 57.6 56 0.0012 30.9 8.4 30 340-371 190-220 (249)
184 TIGR02247 HAD-1A3-hyp Epoxide 57.4 11 0.00024 34.6 3.4 30 238-267 93-122 (211)
185 PRK10792 bifunctional 5,10-met 57.4 11 0.00024 36.6 3.5 68 236-303 11-88 (285)
186 PF12710 HAD: haloacid dehalog 56.2 5 0.00011 36.0 0.9 14 125-138 1-14 (192)
187 PRK14171 bifunctional 5,10-met 55.9 10 0.00022 36.9 3.0 67 236-302 10-86 (288)
188 PLN02887 hydrolase family prot 55.6 14 0.00029 40.0 4.1 51 226-279 315-365 (580)
189 PLN02382 probable sucrose-phos 55.6 9.7 0.00021 39.3 2.9 30 340-371 201-231 (413)
190 PRK14172 bifunctional 5,10-met 55.3 13 0.00028 36.0 3.5 68 236-303 10-87 (278)
191 TIGR02250 FCP1_euk FCP1-like p 55.0 22 0.00047 31.2 4.7 42 237-279 56-97 (156)
192 PTZ00445 p36-lilke protein; Pr 52.9 21 0.00046 33.0 4.3 31 238-268 74-104 (219)
193 PRK14192 bifunctional 5,10-met 52.2 15 0.00033 35.8 3.5 67 236-302 11-87 (283)
194 TIGR02251 HIF-SF_euk Dullard-l 51.5 28 0.00061 30.7 4.9 44 235-279 38-81 (162)
195 PLN02516 methylenetetrahydrofo 50.8 15 0.00034 35.9 3.3 69 235-303 16-94 (299)
196 PRK14177 bifunctional 5,10-met 49.8 17 0.00037 35.3 3.3 68 236-303 11-88 (284)
197 TIGR01484 HAD-SF-IIB HAD-super 49.7 24 0.00053 32.1 4.4 39 239-277 17-55 (204)
198 TIGR01485 SPP_plant-cyano sucr 48.3 13 0.00028 35.3 2.4 43 237-279 19-61 (249)
199 PTZ00174 phosphomannomutase; P 48.2 21 0.00045 33.9 3.7 35 239-273 22-56 (247)
200 COG1024 CaiD Enoyl-CoA hydrata 41.5 27 0.00059 33.3 3.4 35 231-265 15-59 (257)
201 PRK14178 bifunctional 5,10-met 40.9 25 0.00054 34.1 3.0 64 237-303 9-81 (279)
202 PRK10187 trehalose-6-phosphate 40.8 33 0.00072 33.0 3.9 39 239-277 36-75 (266)
203 TIGR01460 HAD-SF-IIA Haloacid 40.3 35 0.00076 32.1 3.9 42 232-273 7-48 (236)
204 PRK10563 6-phosphogluconate ph 40.2 77 0.0017 29.1 6.2 39 238-279 87-125 (221)
205 COG1011 Predicted hydrolase (H 40.1 1.3E+02 0.0028 27.6 7.7 78 238-326 98-181 (229)
206 COG0637 Predicted phosphatase/ 39.4 53 0.0012 30.5 5.0 43 238-280 85-127 (221)
207 COG4359 Uncharacterized conser 39.3 33 0.00072 30.9 3.2 36 239-274 73-108 (220)
208 PRK14502 bifunctional mannosyl 38.6 45 0.00097 36.6 4.7 40 240-279 434-473 (694)
209 PRK13743 conjugal transfer pro 38.4 84 0.0018 26.3 5.2 19 71-89 76-94 (141)
210 cd05017 SIS_PGI_PMI_1 The memb 37.4 31 0.00068 28.4 2.8 33 234-266 48-81 (119)
211 PRK14181 bifunctional 5,10-met 37.2 31 0.00067 33.6 3.0 64 237-303 9-81 (287)
212 COG1832 Predicted CoA-binding 36.9 56 0.0012 27.9 4.1 37 226-262 14-50 (140)
213 PF06645 SPC12: Microsomal sig 36.2 1.7E+02 0.0037 22.2 6.4 20 36-55 5-24 (76)
214 COG0190 FolD 5,10-methylene-te 36.2 38 0.00082 32.8 3.4 67 236-302 8-84 (283)
215 PF00875 DNA_photolyase: DNA p 35.1 56 0.0012 28.7 4.2 35 246-280 57-91 (165)
216 PF12689 Acid_PPase: Acid Phos 34.8 73 0.0016 28.4 4.8 41 239-279 45-86 (169)
217 PF02219 MTHFR: Methylenetetra 34.2 34 0.00073 33.4 2.8 43 226-268 69-112 (287)
218 COG0205 PfkA 6-phosphofructoki 34.0 1.5E+02 0.0032 29.8 7.3 92 183-276 21-117 (347)
219 COG0241 HisB Histidinol phosph 33.9 44 0.00095 30.2 3.2 24 240-263 32-55 (181)
220 cd04906 ACT_ThrD-I_1 First of 33.8 47 0.001 25.6 3.1 33 232-264 42-75 (85)
221 cd05014 SIS_Kpsf KpsF-like pro 33.8 32 0.00069 28.6 2.3 30 241-270 60-89 (128)
222 COG0078 ArgF Ornithine carbamo 33.3 1.9E+02 0.0041 28.4 7.6 122 245-378 90-229 (310)
223 TIGR00676 fadh2 5,10-methylene 33.2 45 0.00097 32.2 3.5 41 227-267 58-99 (272)
224 PRK10725 fructose-1-P/6-phosph 33.1 1.6E+02 0.0035 26.0 7.0 38 240-279 89-126 (188)
225 PF08645 PNK3P: Polynucleotide 32.8 40 0.00087 29.7 2.8 23 241-263 31-53 (159)
226 PRK11840 bifunctional sulfur c 32.7 3.8E+02 0.0082 26.6 9.7 49 226-274 165-216 (326)
227 TIGR01993 Pyr-5-nucltdase pyri 32.1 96 0.0021 27.5 5.3 38 239-279 84-121 (184)
228 KOG2882|consensus 31.6 86 0.0019 30.6 4.9 43 232-274 31-73 (306)
229 cd00537 MTHFR Methylenetetrahy 30.9 44 0.00095 32.3 3.0 43 227-269 58-101 (274)
230 PF06888 Put_Phosphatase: Puta 30.8 2.4E+02 0.0052 26.6 7.8 41 239-279 71-113 (234)
231 cd05008 SIS_GlmS_GlmD_1 SIS (S 29.7 47 0.001 27.4 2.7 29 242-270 60-88 (126)
232 PRK10187 trehalose-6-phosphate 29.5 27 0.00059 33.6 1.3 42 339-388 196-241 (266)
233 cd00860 ThrRS_anticodon ThrRS 29.3 1E+02 0.0023 23.4 4.5 34 233-266 6-40 (91)
234 TIGR01456 CECR5 HAD-superfamil 28.5 82 0.0018 31.2 4.5 48 232-279 9-64 (321)
235 cd01019 ZnuA Zinc binding prot 28.5 1.5E+02 0.0033 28.7 6.4 54 226-279 196-253 (286)
236 cd02071 MM_CoA_mut_B12_BD meth 28.3 1.4E+02 0.0031 24.7 5.3 55 226-280 49-105 (122)
237 PF06941 NT5C: 5' nucleotidase 28.2 51 0.0011 29.8 2.8 27 239-265 73-99 (191)
238 cd01137 PsaA Metal binding pro 26.8 1.6E+02 0.0035 28.6 6.2 54 226-279 194-251 (287)
239 cd05710 SIS_1 A subgroup of th 26.8 57 0.0012 26.9 2.6 38 233-270 51-89 (120)
240 TIGR01647 ATPase-IIIA_H plasma 26.6 9.5E+02 0.021 27.0 16.8 135 39-185 198-345 (755)
241 PRK09432 metF 5,10-methylenete 26.4 60 0.0013 31.8 3.1 41 227-267 82-123 (296)
242 TIGR00677 fadh2_euk methylenet 26.3 65 0.0014 31.3 3.3 41 227-267 59-100 (281)
243 KOG0209|consensus 26.0 63 0.0014 36.0 3.2 28 377-404 919-946 (1160)
244 PHA02597 30.2 hypothetical pro 26.0 2.8E+02 0.0062 24.7 7.4 39 239-278 74-112 (197)
245 PRK08150 enoyl-CoA hydratase; 25.9 1.3E+02 0.0028 28.7 5.2 35 231-266 12-55 (255)
246 PRK10748 flavin mononucleotide 25.2 2.1E+02 0.0046 26.7 6.6 28 239-267 113-140 (238)
247 COG1137 YhbG ABC-type (unclass 25.1 93 0.002 28.8 3.7 51 242-293 176-226 (243)
248 PF03767 Acid_phosphat_B: HAD 24.8 58 0.0013 30.6 2.6 29 239-267 115-143 (229)
249 PF01380 SIS: SIS domain SIS d 24.4 1E+02 0.0023 25.3 3.9 35 238-272 63-97 (131)
250 TIGR02244 HAD-IG-Ncltidse HAD 24.3 1.2E+02 0.0025 30.5 4.7 37 241-277 186-223 (343)
251 PF05240 APOBEC_C: APOBEC-like 24.0 60 0.0013 23.0 1.8 25 242-266 2-26 (55)
252 cd08162 MPP_PhoA_N Synechococc 24.0 1.2E+02 0.0026 30.0 4.7 57 223-279 150-234 (313)
253 cd06558 crotonase-like Crotona 23.8 65 0.0014 28.9 2.7 21 357-379 103-123 (195)
254 PRK14173 bifunctional 5,10-met 23.7 67 0.0015 31.3 2.8 66 236-302 11-83 (287)
255 KOG0206|consensus 23.0 50 0.0011 38.5 2.0 41 284-335 773-813 (1151)
256 PF12017 Tnp_P_element: Transp 22.7 1.3E+02 0.0027 28.5 4.3 36 245-280 199-234 (236)
257 COG0685 MetF 5,10-methylenetet 22.7 60 0.0013 31.8 2.3 37 230-266 80-117 (291)
258 PF03031 NIF: NLI interacting 22.7 89 0.0019 27.0 3.2 38 240-278 37-74 (159)
259 PRK09545 znuA high-affinity zi 22.6 2.1E+02 0.0045 28.3 6.1 54 226-279 220-277 (311)
260 cd01017 AdcA Metal binding pro 22.6 2.2E+02 0.0048 27.5 6.3 54 226-279 188-245 (282)
261 cd00859 HisRS_anticodon HisRS 22.2 1.2E+02 0.0025 22.8 3.5 45 233-277 6-51 (91)
262 TIGR02471 sucr_syn_bact_C sucr 22.1 52 0.0011 30.8 1.7 35 244-279 20-54 (236)
263 KOG0541|consensus 22.0 1.5E+02 0.0034 25.9 4.3 38 242-279 65-103 (171)
264 PRK12360 4-hydroxy-3-methylbut 21.9 2.6E+02 0.0057 27.2 6.4 159 106-278 37-212 (281)
265 PRK01045 ispH 4-hydroxy-3-meth 21.7 5.8E+02 0.013 25.0 8.8 160 106-278 36-213 (298)
266 cd05013 SIS_RpiR RpiR-like pro 21.6 74 0.0016 26.3 2.4 29 242-270 74-102 (139)
267 PF11181 YflT: Heat induced st 21.6 68 0.0015 25.8 2.0 35 241-276 9-46 (103)
268 KOG3167|consensus 21.5 60 0.0013 27.6 1.6 31 238-268 58-88 (153)
269 COG1127 Ttg2A ABC-type transpo 21.3 1.2E+02 0.0025 28.9 3.7 54 238-292 177-232 (263)
270 PF05116 S6PP: Sucrose-6F-phos 21.2 2.4E+02 0.0052 26.7 6.0 29 236-264 124-154 (247)
271 PRK07854 enoyl-CoA hydratase; 20.9 3.2E+02 0.007 25.7 6.9 25 242-266 30-54 (243)
272 TIGR03127 RuMP_HxlB 6-phospho 20.7 82 0.0018 28.0 2.6 34 240-273 84-117 (179)
273 TIGR01663 PNK-3'Pase polynucle 20.7 1.6E+02 0.0034 31.5 5.0 40 240-279 198-249 (526)
274 cd00419 Ferrochelatase_C Ferro 20.6 2E+02 0.0043 24.5 4.8 34 240-273 75-113 (135)
275 TIGR01501 MthylAspMutase methy 20.5 3.9E+02 0.0084 22.8 6.5 66 226-294 51-124 (134)
276 PRK07659 enoyl-CoA hydratase; 20.2 63 0.0014 30.9 1.8 25 242-266 36-60 (260)
No 1
>KOG0202|consensus
Probab=100.00 E-value=2e-83 Score=657.45 Aligned_cols=469 Identities=35% Similarity=0.497 Sum_probs=389.3
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH---HHH---hcC----cHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFII---AFA---LGY----HWL 70 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~----~~~ 70 (492)
|+.|+++|+|+.||.+|.+|+|.+++++.+..|||+|+.+|.+.+.++.++.++++.++++ |+. .++ .+.
T Consensus 201 V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~ 280 (972)
T KOG0202|consen 201 VVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGAL 280 (972)
T ss_pred eecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchh
Confidence 5789999999999999999999999999999999999999999999986665555554443 221 112 345
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEE----------
Q psy11923 71 DAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTT---------- 140 (492)
Q Consensus 71 ~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v---------- 140 (492)
..+..++++.++++|++||+.+++.++.|.+||+|++.+||.+.++|+||.+++||+|||||||+|+|.+
T Consensus 281 ~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~ 360 (972)
T KOG0202|consen 281 YYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGT 360 (972)
T ss_pred hhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEeccccc
Confidence 6788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 141 -------------------------------------------------------------------------------- 140 (492)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (492)
T Consensus 361 ~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~ 440 (972)
T KOG0202|consen 361 ATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLP 440 (972)
T ss_pred ccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCC
Confidence
Q ss_pred ------------------------------------------EcC-CCCceEEEEeCChHHHHHhccccccCC--eeccC
Q psy11923 141 ------------------------------------------EDP-NDPRHLEVMKGAPERILDKCSTIFING--KEKVL 175 (492)
Q Consensus 141 ------------------------------------------~~~-~~~~~~~~~kGa~e~il~~~~~~~~~~--~~~~l 175 (492)
.+. .+.++.+|.||++|.+++||++++.++ +.+|+
T Consensus 441 ~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pL 520 (972)
T KOG0202|consen 441 GTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPL 520 (972)
T ss_pred cchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeC
Confidence 000 113478999999999999998887644 67999
Q ss_pred CHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCC
Q psy11923 176 DEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAG 255 (492)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~G 255 (492)
.+..++.+.+...+++.+|+|||++|++..+.+.-.+....+.......|.|++|+|++++.||+|++++++|+.|+++|
T Consensus 521 t~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aG 600 (972)
T KOG0202|consen 521 TQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAG 600 (972)
T ss_pred cHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcC
Confidence 99999999999999999999999999987664211111122333455578999999999999999999999999999999
Q ss_pred CeEEEEcCCCHHHHHHHHhhccccc----------cccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCC
Q psy11923 256 IKVIMVTGDHPITAKIIEADTTEDQ----------SGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEG 325 (492)
Q Consensus 256 i~v~mlTGD~~~tA~~ia~~~gi~~----------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~ 325 (492)
|+|+|+||||++||.+||+++|+.. +|.+|+++++++... ...+...+.+-.
T Consensus 601 IrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~------------------~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 601 IRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDD------------------AVRRVLVFARAE 662 (972)
T ss_pred CEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHH------------------HhhcceEEEecC
Confidence 9999999999999999999999753 355677777766531 111112222223
Q ss_pred cccHHHHHHh-------cCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHH
Q psy11923 326 NETVEDIALR-------LNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 398 (492)
Q Consensus 326 ~~~~~~~~~~-------~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~ 398 (492)
++.+..+.+. +.|+|||+||+|||+.|++| ||||++|||+||+|||+||.||||++++.++++||.+|+||+
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG-IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik 741 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG-IAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIK 741 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc-eeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHH
Confidence 3333333222 35888999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC---------------ccchheeeee
Q psy11923 399 KSIAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE---------------ISPFLTFILL 463 (492)
Q Consensus 399 ~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~---------------~~~~~~~~~~ 463 (492)
+++.|.++.|+.++.++++...+++|.|++|+|+||+|+++|++|+.+|+.++|+ ++.|+++.++
T Consensus 742 ~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l 821 (972)
T KOG0202|consen 742 NFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYL 821 (972)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998877655 4789999998
Q ss_pred ccccccceeee--eeeec---CCCcccccc
Q psy11923 464 DIPLPLGTVTI--LCIDL---GTDMIGHQM 488 (492)
Q Consensus 464 ~~~~~~~~~~~--~~~~~---~~~~~~~~~ 488 (492)
..+.|.++.+. |+|++ +....++|.
T Consensus 822 ~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~ 851 (972)
T KOG0202|consen 822 AIGIIVGVATVGVFVWWMYGADGKVTYRQL 851 (972)
T ss_pred HhheeeeeeEhHhhhHHHhcCCCCcChhhh
Confidence 88888875444 44433 334444444
No 2
>KOG0204|consensus
Probab=100.00 E-value=4.6e-76 Score=602.57 Aligned_cols=430 Identities=31% Similarity=0.436 Sum_probs=364.2
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC----------
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAF---ALGY---------- 67 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------- 67 (492)
|.+|.++++|+++|.+|..|+++..+.+...+++|+|-++++++..+..+.+.++.+++++.. +.+.
T Consensus 294 v~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~ 373 (1034)
T KOG0204|consen 294 VMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTT 373 (1034)
T ss_pred eecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCcc
Confidence 468999999999999999999999999998899999999999999888777777666655542 2210
Q ss_pred -------cHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEE
Q psy11923 68 -------HWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTT 140 (492)
Q Consensus 68 -------~~~~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v 140 (492)
.+...+..++.++++|+|++||+|+++++++++++|.+.+.|+|+++++|++|.+++||+|||||||+|+|+|
T Consensus 374 ~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 374 WSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred ccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 1234556666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 141 -------------------------------------------------------------------------------- 140 (492)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (492)
T Consensus 454 V~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~ 533 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEK 533 (1034)
T ss_pred EeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhh
Confidence
Q ss_pred -----------------EcCCCCceEEEEeCChHHHHHhcccccc-CCeeccCCHHHHHHHHHHHHHHhhcCceEEEeee
Q psy11923 141 -----------------EDPNDPRHLEVMKGAPERILDKCSTIFI-NGKEKVLDEEMREAFNNAYYELGGLGERVLGFCD 202 (492)
Q Consensus 141 -----------------~~~~~~~~~~~~kGa~e~il~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~ 202 (492)
.+..++..++++||++|.+++.|.++.. +++.+|+.+.-+..+++.++.++.+|+|++++||
T Consensus 534 v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy 613 (1034)
T KOG0204|consen 534 VVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAY 613 (1034)
T ss_pred eeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEe
Confidence 1112333249999999999999999987 7889999998888999999999999999999999
Q ss_pred eccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc
Q psy11923 203 LLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG 282 (492)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~ 282 (492)
+......- .+.+.+..+..+.|++++|+++++||.|||++++|+.||++||+|.|+||||-.||++||.+|||...+
T Consensus 614 ~df~~~~~---~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~ 690 (1034)
T KOG0204|consen 614 RDFVAGPD---EEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPG 690 (1034)
T ss_pred eccccCCC---CCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCC
Confidence 98554310 011112234456899999999999999999999999999999999999999999999999999997544
Q ss_pred --------cccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeec-CCcccHHHHHHh-------cCCcccccChh
Q psy11923 283 --------VQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIIS-EGNETVEDIALR-------LNIPVSEVNPR 346 (492)
Q Consensus 283 --------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g-d~~~~~~~~~~~-------~~~~~dgvnd~ 346 (492)
.+|.+.++++.. ++..++.+.. ..++|..-+.+. +..+|||.||+
T Consensus 691 ~d~~~lEG~eFr~~s~ee~~-------------------~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDa 751 (1034)
T KOG0204|consen 691 GDFLALEGKEFRELSQEERD-------------------KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDA 751 (1034)
T ss_pred CccceecchhhhhcCHHHHH-------------------hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCc
Confidence 345555554432 3444444444 345665554432 23568999999
Q ss_pred hhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCC
Q psy11923 347 EAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLP 426 (492)
Q Consensus 347 ~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~ 426 (492)
|||+.||+| .|||++|||+|||+|||+|+||||++++++++|||+.|.||+|+++|.+.-|+.+++..+.+.....-.|
T Consensus 752 PALkeADVG-lAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsP 830 (1034)
T KOG0204|consen 752 PALKEADVG-LAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSP 830 (1034)
T ss_pred hhhhhcccc-hhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCcc
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999888888777899
Q ss_pred hHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 427 LGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 427 ~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
+.+.|+||+|++||.+.++||.+++|.
T Consensus 831 LtAVQlLWVNLIMDTLgALALATepPt 857 (1034)
T KOG0204|consen 831 LTAVQLLWVNLIMDTLGALALATEPPT 857 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999999888765
No 3
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.9e-74 Score=636.27 Aligned_cols=413 Identities=27% Similarity=0.395 Sum_probs=363.7
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
|++|+++++|++||.+|.+|||.+++++++.+++|+|+.++++++++..++++++.++++++++.+.+|..++.++++++
T Consensus 250 V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~ 329 (902)
T PRK10517 250 VVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVA 329 (902)
T ss_pred EeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999899999999999999999888888888877777666678899999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP----------------- 143 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~----------------- 143 (492)
+++|||+||++++++++.++++|+|+|+++|+++++|++|++|++|||||||||+|+|+|.+.
T Consensus 330 V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l 409 (902)
T PRK10517 330 VGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWL 409 (902)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999998310
Q ss_pred -----------------------------------------------------CCCceEEEEeCChHHHHHhccccccCC
Q psy11923 144 -----------------------------------------------------NDPRHLEVMKGAPERILDKCSTIFING 170 (492)
Q Consensus 144 -----------------------------------------------------~~~~~~~~~kGa~e~il~~~~~~~~~~ 170 (492)
.++.+.+++||++|.++++|.++..++
T Consensus 410 ~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 489 (902)
T PRK10517 410 NSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNG 489 (902)
T ss_pred cCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCC
Confidence 011245789999999999999887777
Q ss_pred eeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHH
Q psy11923 171 KEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAK 250 (492)
Q Consensus 171 ~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~ 250 (492)
...|++++.++++.+..++++.+|+|+++++++.++.++... + ...+.|++++|+++++||+|||++++|+.
T Consensus 490 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~------~--~~~e~~l~~lGli~~~Dp~R~~a~~aI~~ 561 (902)
T PRK10517 490 EIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDY------Q--RADESDLILEGYIAFLDPPKETTAPALKA 561 (902)
T ss_pred CeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccccc------c--cccccCceeeehHhhhCcchhhHHHHHHH
Confidence 788999888888888899999999999999998776532110 0 01257899999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCHHHHHHHHhhccccccc----------------------cccccCChhHHHHHHHHhhhhhhccc
Q psy11923 251 CRSAGIKVIMVTGDHPITAKIIEADTTEDQSG----------------------VQYDRTSPGFKALARIATLCNRAEFK 308 (492)
Q Consensus 251 L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~----------------------~~~~~~~~~~k~~~~~~~~~~~~~~~ 308 (492)
||++||+|+|+||||+.||.+||+++||+.+. ..|++++|++|. ..++.+|+
T Consensus 562 l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~-~IV~~Lq~----- 635 (902)
T PRK10517 562 LKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE-RIVTLLKR----- 635 (902)
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH-HHHHHHHH-----
Confidence 99999999999999999999999999996211 467788888883 44445543
Q ss_pred CCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 309 GGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 309 ~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
.++.|+|+| ||+||+||++.||+| |||| +|+|+|+++||+||++|||+.++++++
T Consensus 636 ------~G~vVam~G-----------------DGvNDaPALk~ADVG-IAmg-~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 636 ------EGHVVGFMG-----------------DGINDAPALRAADIG-ISVD-GAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred ------CCCEEEEEC-----------------CCcchHHHHHhCCEE-EEeC-CcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 266777765 559999999999999 9999 999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 389 EGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 389 ~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
+||++|+||+|++.|.++.|+.+++..+++.++..++|+.++|++|+|+++| +|+++++.++|+
T Consensus 691 ~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~ 754 (902)
T PRK10517 691 EGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVD 754 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCC
Confidence 9999999999999999999999998888877765448999999999999999 789998887555
No 4
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.9e-73 Score=627.28 Aligned_cols=412 Identities=25% Similarity=0.371 Sum_probs=363.3
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
|++|+++++|++||.+|.+|||.+++++ +.+++|+|+.++++++++..++++++++.+++|++.+.+|..++.++++++
T Consensus 216 v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~ 294 (867)
T TIGR01524 216 VLSGHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVA 294 (867)
T ss_pred EEEeEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHH
Confidence 4689999999999999999999999988 777899999999999999999988888888877766778889999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP----------------- 143 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~----------------- 143 (492)
+++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+.
T Consensus 295 v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l 374 (867)
T TIGR01524 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWL 374 (867)
T ss_pred HHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998210
Q ss_pred -----------------------------------------------------CCCceEEEEeCChHHHHHhccccccCC
Q psy11923 144 -----------------------------------------------------NDPRHLEVMKGAPERILDKCSTIFING 170 (492)
Q Consensus 144 -----------------------------------------------------~~~~~~~~~kGa~e~il~~~~~~~~~~ 170 (492)
.++.+.+++||++|.++++|.++..++
T Consensus 375 ~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 454 (867)
T TIGR01524 375 NSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGG 454 (867)
T ss_pred hCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCC
Confidence 011256789999999999999887777
Q ss_pred eeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHH
Q psy11923 171 KEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAK 250 (492)
Q Consensus 171 ~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~ 250 (492)
...+++++.++.+.+..++++.+|+|+++++++.++.++.. .. ...+.|++++|+++++||+|||++++|++
T Consensus 455 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~----~~----~~~e~~l~~lGli~l~Dp~R~~~~~aI~~ 526 (867)
T TIGR01524 455 AVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD----FT----KTDEEQLIIEGFLGFLDPPKESTKEAIAA 526 (867)
T ss_pred ceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc----cc----ccccCCcEEEEEEEeeCCCchhHHHHHHH
Confidence 88889888888888889999999999999999987654211 00 11257899999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCHHHHHHHHhhcccccc----------------------ccccccCChhHHHHHHHHhhhhhhccc
Q psy11923 251 CRSAGIKVIMVTGDHPITAKIIEADTTEDQS----------------------GVQYDRTSPGFKALARIATLCNRAEFK 308 (492)
Q Consensus 251 L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~----------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~ 308 (492)
||++||+|+|+||||+.||.+||+++||... -..|++++|++|. ..+..+|++
T Consensus 527 l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~-~iV~~lq~~---- 601 (867)
T TIGR01524 527 LFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKS-RIIGLLKKA---- 601 (867)
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH-HHHHHHHhC----
Confidence 9999999999999999999999999999621 1467788888883 444555432
Q ss_pred CCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 309 GGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 309 ~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
++.|+|+| ||+||+||++.||+| |||| +|+|+|+++||+||++|||+.++++++
T Consensus 602 -------G~vVam~G-----------------DGvNDapALk~AdVG-IAmg-~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 -------GHTVGFLG-----------------DGINDAPALRKADVG-ISVD-TAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred -------CCEEEEEC-----------------CCcccHHHHHhCCEE-EEeC-CccHHHHHhCCEEEecCChHHHHHHHH
Confidence 56677765 559999999999999 9999 999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 389 EGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 389 ~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
+||++|+||+|++.|.++.|+..++..+++.++..++|+.++|++|+|+++| +|++++++++|+
T Consensus 656 ~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~ 719 (867)
T TIGR01524 656 EGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMD 719 (867)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCC
Confidence 9999999999999999999999998888877776669999999999999999 799998877665
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.1e-73 Score=626.67 Aligned_cols=414 Identities=25% Similarity=0.379 Sum_probs=361.0
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
|++|+++++|++||.+|.+|||.+++++ +..++|+++.++++..++..+++.++.+.+++.++...+|..++.++++++
T Consensus 249 V~~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~ 327 (903)
T PRK15122 249 VVSGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVA 327 (903)
T ss_pred EEeeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHH
Confidence 4689999999999999999999999988 667899999999999988777776666666655555678889999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEc------------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTED------------------ 142 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~------------------ 142 (492)
+++|||+||++++++++.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+
T Consensus 328 V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l 407 (903)
T PRK15122 328 VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWL 407 (903)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999710
Q ss_pred ----------------------------------------------------CCCCceEEEEeCChHHHHHhccccccCC
Q psy11923 143 ----------------------------------------------------PNDPRHLEVMKGAPERILDKCSTIFING 170 (492)
Q Consensus 143 ----------------------------------------------------~~~~~~~~~~kGa~e~il~~~~~~~~~~ 170 (492)
..++++++++||++|.++++|.+...++
T Consensus 408 ~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 487 (903)
T PRK15122 408 NSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGD 487 (903)
T ss_pred hCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCC
Confidence 0023467889999999999999877677
Q ss_pred eeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHH
Q psy11923 171 KEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAK 250 (492)
Q Consensus 171 ~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~ 250 (492)
...|++++.++++.+..++++.+|+|+++++++.++.++..+. .....+.|++++|+++++||+|||++++|+.
T Consensus 488 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~ 561 (903)
T PRK15122 488 TVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ------YSTADERDLVIRGFLTFLDPPKESAAPAIAA 561 (903)
T ss_pred CeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc------cccccccCcEEEEEEeccCccHHHHHHHHHH
Confidence 7788998888888888999999999999999988765432110 0112457899999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCHHHHHHHHhhccccccc----------------------cccccCChhHHHHHHHHhhhhhhccc
Q psy11923 251 CRSAGIKVIMVTGDHPITAKIIEADTTEDQSG----------------------VQYDRTSPGFKALARIATLCNRAEFK 308 (492)
Q Consensus 251 L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~----------------------~~~~~~~~~~k~~~~~~~~~~~~~~~ 308 (492)
||++||+|+|+||||+.||.+||+++||.... ..|++++|++|. ..+..+|++
T Consensus 562 l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~-~iV~~Lq~~---- 636 (903)
T PRK15122 562 LRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS-RVLKALQAN---- 636 (903)
T ss_pred HHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH-HHHHHHHhC----
Confidence 99999999999999999999999999996211 477888888883 445555532
Q ss_pred CCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 309 GGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 309 ~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
++.|+|+|| |+||+||++.||+| |||| +|+|+|+++||+||++|||+.++++++
T Consensus 637 -------G~vVamtGD-----------------GvNDaPALk~ADVG-IAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 -------GHTVGFLGD-----------------GINDAPALRDADVG-ISVD-SGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred -------CCEEEEECC-----------------CchhHHHHHhCCEE-EEeC-cccHHHHHhcCEEEecCChHHHHHHHH
Confidence 677777665 59999999999999 9999 999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 389 EGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 389 ~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
+||++|+||++++.|.++.|+..++..+++.++..+.|+.++|++|+|+++|. |++++++++|+
T Consensus 691 ~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~ 754 (903)
T PRK15122 691 KGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMD 754 (903)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCC
Confidence 99999999999999999999999888877777766689999999999999995 99999888776
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=6.9e-73 Score=632.99 Aligned_cols=423 Identities=72% Similarity=1.080 Sum_probs=366.9
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
|++|++.++|++||.+|.+||+.+++++++.+++|+++.+++++.+++.+++++++++++++++.+.+|..++.++++++
T Consensus 223 v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 302 (997)
T TIGR01106 223 CVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGII 302 (997)
T ss_pred eeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 46899999999999999999999999998888999999999999999999988888888888777888999999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP----------------- 143 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~----------------- 143 (492)
+++|||+|+++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+.
T Consensus 303 v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 382 (997)
T TIGR01106 303 VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSG 382 (997)
T ss_pred hhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999986100
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 144 -------------------------------------------------------------------------------- 143 (492)
Q Consensus 144 -------------------------------------------------------------------------------- 143 (492)
T Consensus 383 ~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~ 462 (997)
T TIGR01106 383 VSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKY 462 (997)
T ss_pred ccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCce
Confidence
Q ss_pred -------C---CCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCC
Q psy11923 144 -------N---DPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLG 213 (492)
Q Consensus 144 -------~---~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~ 213 (492)
. ++++.+++||+||.|+++|.++..++...|++++.++.+.+..++++.+|+|++++|++.++++++.+.
T Consensus 463 m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~ 542 (997)
T TIGR01106 463 QLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEG 542 (997)
T ss_pred EEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccc
Confidence 0 012567899999999999998887888899999999999999999999999999999998876554432
Q ss_pred CccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccccccc----------
Q psy11923 214 FKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGV---------- 283 (492)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~---------- 283 (492)
...+.++.+..|.|++++|+++++||+|||++++|++|+++|++++|+|||++.||.++|+++|+...+.
T Consensus 543 ~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~ 622 (997)
T TIGR01106 543 FQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARL 622 (997)
T ss_pred ccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhc
Confidence 2222223344578999999999999999999999999999999999999999999999999999954321
Q ss_pred ----------------------------------------ccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeec
Q psy11923 284 ----------------------------------------QYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIIS 323 (492)
Q Consensus 284 ----------------------------------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 323 (492)
.+++++|++|. ..+..++ +.++.|
T Consensus 623 ~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~-~IV~~lq-----------~~g~vv---- 686 (997)
T TIGR01106 623 NIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKL-IIVEGCQ-----------RQGAIV---- 686 (997)
T ss_pred cccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHH-HHHHHHH-----------HCCCEE----
Confidence 22222222221 1111111 112223
Q ss_pred CCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHH
Q psy11923 324 EGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 403 (492)
Q Consensus 324 d~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~ 403 (492)
.|+|||+||+||++.||+| ||||.+|+|+|+++||++|++|||+++++++++||++|.|+++++.|
T Consensus 687 -------------~~~GDG~ND~paLk~AdVG-iamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~ 752 (997)
T TIGR01106 687 -------------AVTGDGVNDSPALKKADIG-VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 752 (997)
T ss_pred -------------EEECCCcccHHHHhhCCcc-eecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3667779999999999999 99998899999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 404 TLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 404 ~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
.++.|+.++++.+++.+++.|+|++++|++|+|+++|++|+++++.++|+
T Consensus 753 ~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~ 802 (997)
T TIGR01106 753 TLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAE 802 (997)
T ss_pred HHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999998776655
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-73 Score=630.75 Aligned_cols=411 Identities=37% Similarity=0.544 Sum_probs=363.2
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-HHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYH-WLDAVIFLIGI 79 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v 79 (492)
|++|++.++|++||.+|..||+++++......++|+++.++++...++.+.++++++.++..++.+.. |...+.+++++
T Consensus 226 V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l 305 (917)
T COG0474 226 VVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALAL 305 (917)
T ss_pred EEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHH
Confidence 57899999999999999999999999998788999999999999999999999999999888776555 89999999999
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEc-----------------
Q psy11923 80 IVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTED----------------- 142 (492)
Q Consensus 80 lv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~----------------- 142 (492)
++.++|++||+.++++++.++.+|+|+++++|+++++|+||++|++|+|||||||+|+|+|..
T Consensus 306 ~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~ 385 (917)
T COG0474 306 AVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKD 385 (917)
T ss_pred HHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999810
Q ss_pred ---------------------------------------------------------------------------CCCCc
Q psy11923 143 ---------------------------------------------------------------------------PNDPR 147 (492)
Q Consensus 143 ---------------------------------------------------------------------------~~~~~ 147 (492)
..+++
T Consensus 386 ~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~ 465 (917)
T COG0474 386 SPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK 465 (917)
T ss_pred chHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc
Confidence 01123
Q ss_pred eEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCC
Q psy11923 148 HLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTG 227 (492)
Q Consensus 148 ~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
+.+++|||||.|+++|.+. +..+++.++.++.+++..++++.+|+|++++|++.++.++.... . +..|.|
T Consensus 466 ~~~~~KGApe~il~~~~~~---~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~------~-~~~E~d 535 (917)
T COG0474 466 YILFVKGAPEVILERCKSI---GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDE------V-DEIESD 535 (917)
T ss_pred EEEEEcCChHHHHHHhccc---CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccch------h-hhhhcc
Confidence 7889999999999999876 77788999999999999999999999999999996654432111 1 457799
Q ss_pred cEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc--------cc---------------
Q psy11923 228 MRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG--------VQ--------------- 284 (492)
Q Consensus 228 ~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~--------~~--------------- 284 (492)
+.++|+++++||+|+|++++|+.|+++||++||+||||++||++||++||+..++ .+
T Consensus 536 l~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~ 615 (917)
T COG0474 536 LVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEE 615 (917)
T ss_pred ceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999976553 22
Q ss_pred ---cccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccc
Q psy11923 285 ---YDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGI 361 (492)
Q Consensus 285 ---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~ 361 (492)
|++++|++|. ..++.+|+ .++.|+|. |||+||+||++.||+| ||||.
T Consensus 616 ~~VfARvsP~qK~-~IV~~lq~-----------~g~vVamt-----------------GDGvNDapALk~ADVG-Iamg~ 665 (917)
T COG0474 616 LSVFARVSPEQKA-RIVEALQK-----------SGHVVAMT-----------------GDGVNDAPALKAADVG-IAMGG 665 (917)
T ss_pred CcEEEEcCHHHHH-HHHHHHHh-----------CCCEEEEe-----------------CCCchhHHHHHhcCcc-EEecc
Confidence 3445555552 22222221 15555554 5669999999999999 99998
Q ss_pred cchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCC-CChHHHHHHHHHHhhh
Q psy11923 362 AGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIP-LPLGTVTILCIDLGTD 440 (492)
Q Consensus 362 ~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~ 440 (492)
+|+|+|+++||+++++|+|+.++.++.|||++|.|+++++.|.+++|+.++++++++.+++.+ +|++++|++|+|+++|
T Consensus 666 ~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d 745 (917)
T COG0474 666 EGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTD 745 (917)
T ss_pred cHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999998888 9999999999999999
Q ss_pred hcccCcCCCCC
Q psy11923 441 MELTWQGKTHI 451 (492)
Q Consensus 441 ~~~~~~l~~~~ 451 (492)
++|+++++.++
T Consensus 746 ~~pa~~L~~~~ 756 (917)
T COG0474 746 SLPALALGVED 756 (917)
T ss_pred hhhhheeecCC
Confidence 99999987665
No 8
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.7e-72 Score=628.20 Aligned_cols=413 Identities=31% Similarity=0.463 Sum_probs=358.9
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----c-------
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFA---L----G------- 66 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~------- 66 (492)
|++|+++++|++||.+|.+|||++++++++ +++|+++.++++.+++.+++++++++.+++|+. + +
T Consensus 240 v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 318 (941)
T TIGR01517 240 VNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEE 318 (941)
T ss_pred EEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccch
Confidence 468999999999999999999999998865 578999999999999998888877777766532 1 1
Q ss_pred --CcHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-
Q psy11923 67 --YHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP- 143 (492)
Q Consensus 67 --~~~~~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~- 143 (492)
.+|...+.+++++++++|||+|++++|++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+.
T Consensus 319 ~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~ 398 (941)
T TIGR01517 319 DAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGY 398 (941)
T ss_pred hhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEE
Confidence 14677889999999999999999999999999999999999999999999999999999999999999999987210
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 144 -------------------------------------------------------------------------------- 143 (492)
Q Consensus 144 -------------------------------------------------------------------------------- 143 (492)
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF 478 (941)
T TIGR01517 399 IGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPF 478 (941)
T ss_pred EecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhcccccc
Confidence
Q ss_pred -------------CCCceEEEEeCChHHHHHhccccc-cCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCC
Q psy11923 144 -------------NDPRHLEVMKGAPERILDKCSTIF-INGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADK 209 (492)
Q Consensus 144 -------------~~~~~~~~~kGa~e~il~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~ 209 (492)
.++++.+++||++|.++++|.... .++..+|+++ .++++.+..++++.+|+|+++++++.++.++
T Consensus 479 ~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~ 557 (941)
T TIGR01517 479 NSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEE 557 (941)
T ss_pred CCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccc
Confidence 001256899999999999998754 3566677776 6778888899999999999999999886554
Q ss_pred CCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc-------
Q psy11923 210 FPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG------- 282 (492)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~------- 282 (492)
+... ...+.|++++|+++++||+|||++++|+.||++|++++|+||||+.||.+||+++|+...+
T Consensus 558 ~~~~--------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~ 629 (941)
T TIGR01517 558 FPRK--------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGK 629 (941)
T ss_pred cccc--------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHH
Confidence 3211 1236889999999999999999999999999999999999999999999999999997432
Q ss_pred -----------------cccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccCh
Q psy11923 283 -----------------VQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNP 345 (492)
Q Consensus 283 -----------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd 345 (492)
..+++++|++|. ..+..+|+ .++.|+|+| ||+||
T Consensus 630 ~~~~l~~~el~~~i~~~~Vfar~sPe~K~-~iV~~lq~-----------~g~vVam~G-----------------DGvND 680 (941)
T TIGR01517 630 EFRRLVYEEMDPILPKLRVLARSSPLDKQ-LLVLMLKD-----------MGEVVAVTG-----------------DGTND 680 (941)
T ss_pred HhhhCCHHHHHHHhccCeEEEECCHHHHH-HHHHHHHH-----------CCCEEEEEC-----------------CCCch
Confidence 467888888884 44455543 256677665 55999
Q ss_pred hhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCC
Q psy11923 346 REAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPL 425 (492)
Q Consensus 346 ~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~ 425 (492)
+||++.||+| ||||++|+|+|+++||++|++|+|+++++++++||++|+||++++.|.+++|+..+++.+++.+++.|+
T Consensus 681 apALk~AdVG-IAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 681 APALKLADVG-FSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred HHHHHhCCcc-eecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999988888999
Q ss_pred ChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 426 PLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 426 ~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
|++++|++|+|+++|++|+++++.++|+
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~ 787 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPT 787 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCcc
Confidence 9999999999999999999998766655
No 9
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-72 Score=594.17 Aligned_cols=376 Identities=23% Similarity=0.324 Sum_probs=328.3
Q ss_pred cceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHH
Q psy11923 2 VTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALG-YHWLDAVIFLIGII 80 (492)
Q Consensus 2 ~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~vl 80 (492)
.+|..+.+|+++|.||+++||.+++++++.+|+|+|+.+||++.+|+|.++++++++|+.|++.+ .+|..++.+++++|
T Consensus 284 ~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avL 363 (713)
T COG2217 284 LDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVL 363 (713)
T ss_pred CCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhe
Confidence 46889999999999999999999999999999999999999999999999999999999998877 58999999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeCChHHHH
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKGAPERIL 160 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il 160 (492)
+++|||||.+++|+++..++.+++|+|||+|+++++|+++++|+++||||||||+|+|+|.+.. ...|+.++++
T Consensus 364 VIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~------~~~~~e~~~L 437 (713)
T COG2217 364 VIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVV------ALDGDEDELL 437 (713)
T ss_pred eeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEe------cCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998743 2233456788
Q ss_pred HhccccccCCeeccCCHHHHHHHHH-------HHHHHhhcCceEEEe-eeeccCCCCCCCC--------------CccCC
Q psy11923 161 DKCSTIFINGKEKVLDEEMREAFNN-------AYYELGGLGERVLGF-CDLLLPADKFPLG--------------FKFDC 218 (492)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~G~r~l~~-a~~~l~~~~~~~~--------------~~~~~ 218 (492)
..+++.+ +.|+||+++++.++..+ .+++.+|+|++-..- ....++++.+..+ .+.++
T Consensus 438 ~laAalE-~~S~HPiA~AIv~~a~~~~~~~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G 516 (713)
T COG2217 438 ALAAALE-QHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEG 516 (713)
T ss_pred HHHHHHH-hcCCChHHHHHHHHHHhcCCCCccceeeeccCcEEEEECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcC
Confidence 8877766 89999999999986664 267778888763211 1222222221110 11233
Q ss_pred CCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHH
Q psy11923 219 DEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARI 298 (492)
Q Consensus 219 ~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~ 298 (492)
.+..++..|++++|+++++|++|||++++|++||++|++++|+||||+.+|++||+++||++ .++++.||+| .+.+
T Consensus 517 ~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---v~AellPedK-~~~V 592 (713)
T COG2217 517 KTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---VRAELLPEDK-AEIV 592 (713)
T ss_pred CeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---heccCCcHHH-HHHH
Confidence 34578889999999999999999999999999999999999999999999999999999987 8999999999 4677
Q ss_pred HhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCC
Q psy11923 299 ATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDD 378 (492)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~ 378 (492)
++++++ +++|.|+||| +||+|||+.||+| |||| +|+|+|+++||++|++|
T Consensus 593 ~~l~~~-----------g~~VamVGDG-----------------INDAPALA~AdVG-iAmG-~GtDvA~eaADvvL~~~ 642 (713)
T COG2217 593 RELQAE-----------GRKVAMVGDG-----------------INDAPALAAADVG-IAMG-SGTDVAIEAADVVLMRD 642 (713)
T ss_pred HHHHhc-----------CCEEEEEeCC-----------------chhHHHHhhcCee-Eeec-CCcHHHHHhCCEEEecC
Confidence 777743 6788887755 9999999999999 9999 89999999999999999
Q ss_pred CchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11923 379 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTF 418 (492)
Q Consensus 379 ~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~ 418 (492)
|+..++++++++|+++++||||+.|++.||++.+.+...+
T Consensus 643 dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 643 DLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999877665544
No 10
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.5e-70 Score=595.53 Aligned_cols=390 Identities=27% Similarity=0.417 Sum_probs=341.7
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFA-LGYHWLDAVIFLIGI 79 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v 79 (492)
+++|+++++|++||++|.+|||.+++++++.+++|+|+.+++++.++++++++++++.+++|++ .+.+|..++.+++++
T Consensus 164 v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~v 243 (755)
T TIGR01647 164 VKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVL 243 (755)
T ss_pred EEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4689999999999999999999999999998999999999999999999998888888888876 677899999999999
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEc-----------------
Q psy11923 80 IVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTED----------------- 142 (492)
Q Consensus 80 lv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~----------------- 142 (492)
++++|||+||+++|++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+
T Consensus 244 lv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a 323 (755)
T TIGR01647 244 LVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYA 323 (755)
T ss_pred HHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999810
Q ss_pred --------------------------------------------------CC-CCceEEEEeCChHHHHHhccccccCCe
Q psy11923 143 --------------------------------------------------PN-DPRHLEVMKGAPERILDKCSTIFINGK 171 (492)
Q Consensus 143 --------------------------------------------------~~-~~~~~~~~kGa~e~il~~~~~~~~~~~ 171 (492)
.. +++.+.++||++|.++++|...
T Consensus 324 ~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~----- 398 (755)
T TIGR01647 324 ALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK----- 398 (755)
T ss_pred HHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----
Confidence 00 1345678899999999999631
Q ss_pred eccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHH
Q psy11923 172 EKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKC 251 (492)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L 251 (492)
.+.++++.+..++++.+|+|+++++++. .+.+++++|+++++||+|||++++|++|
T Consensus 399 -----~~~~~~~~~~~~~~~~~G~rvl~vA~~~-------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l 454 (755)
T TIGR01647 399 -----KEIEEKVEEKVDELASRGYRALGVARTD-------------------EEGRWHFLGLLPLFDPPRHDTKETIERA 454 (755)
T ss_pred -----HHHHHHHHHHHHHHHhCCCEEEEEEEEc-------------------CCCCcEEEEEeeccCCChhhHHHHHHHH
Confidence 3455667778889999999999999861 1367899999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHhhcccccc---------------------------ccccccCChhHHHHHHHHhhhhh
Q psy11923 252 RSAGIKVIMVTGDHPITAKIIEADTTEDQS---------------------------GVQYDRTSPGFKALARIATLCNR 304 (492)
Q Consensus 252 ~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~---------------------------~~~~~~~~~~~k~~~~~~~~~~~ 304 (492)
|++||+|+|+||||+.||.+||+++|+... ...|++++|++|. ..++.+|++
T Consensus 455 ~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~-~iV~~lq~~ 533 (755)
T TIGR01647 455 RHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKY-EIVEILQKR 533 (755)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHH-HHHHHHHhc
Confidence 999999999999999999999999999641 0157788888883 455555532
Q ss_pred hcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHH
Q psy11923 305 AEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIV 384 (492)
Q Consensus 305 ~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~ 384 (492)
++.|+|+|| |+||+||++.||+| |||| +|+|+|+++||+||++|||+.++
T Consensus 534 -----------G~~VamvGD-----------------GvNDapAL~~AdVG-IAm~-~gtdvAkeaADivLl~d~l~~I~ 583 (755)
T TIGR01647 534 -----------GHLVGMTGD-----------------GVNDAPALKKADVG-IAVA-GATDAARSAADIVLTEPGLSVIV 583 (755)
T ss_pred -----------CCEEEEEcC-----------------CcccHHHHHhCCee-EEec-CCcHHHHHhCCEEEEcCChHHHH
Confidence 667777664 59999999999999 9999 99999999999999999999999
Q ss_pred hHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHH-hcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 385 TGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFIL-LDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 385 ~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
+++++||++|+||++|+.|.+..|+..+++.++..+ ++ .|++|+|++|+|+++|. |+++++++.++
T Consensus 584 ~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~--~~l~~~~il~~~l~~d~-~~~~l~~~~~~ 650 (755)
T TIGR01647 584 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN--FYFPPIMVVIIAILNDG-TIMTIAYDNVK 650 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC--cchhHHHHHHHHHHHhH-hHhhccCCCCC
Confidence 999999999999999999999999998876666554 44 45999999999999996 58887665544
No 11
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.2e-69 Score=601.83 Aligned_cols=404 Identities=33% Similarity=0.502 Sum_probs=356.4
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
|++|+++++|++||.+|.+|||.+++++++..++|+|+.+++++.++.+++++++++.++++++.+.+|..++.++++++
T Consensus 203 v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ll 282 (884)
T TIGR01522 203 VRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLA 282 (884)
T ss_pred EEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999998887766555555555556678899999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP----------------- 143 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~----------------- 143 (492)
+++|||+||+++|++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+.
T Consensus 283 v~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~ 362 (884)
T TIGR01522 283 VAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQ 362 (884)
T ss_pred HHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCC
Confidence 999999999999999999999999999999999999999999999999999999999886210
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 144 -------------------------------------------------------------------------------- 143 (492)
Q Consensus 144 -------------------------------------------------------------------------------- 143 (492)
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 442 (884)
T TIGR01522 363 FGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKW 442 (884)
T ss_pred CCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCe
Confidence
Q ss_pred --------CCCceEEEEeCChHHHHHhcccccc-CCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCC
Q psy11923 144 --------NDPRHLEVMKGAPERILDKCSTIFI-NGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGF 214 (492)
Q Consensus 144 --------~~~~~~~~~kGa~e~il~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~ 214 (492)
.++++.+++||++|.++.+|..+.. ++...+++++.++.+.+..++++.+|+|++++|++.+
T Consensus 443 m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------- 513 (884)
T TIGR01522 443 MAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------- 513 (884)
T ss_pred EEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------
Confidence 0122467889999999999987764 4667788888888888889999999999999998753
Q ss_pred ccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc------------
Q psy11923 215 KFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG------------ 282 (492)
Q Consensus 215 ~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~------------ 282 (492)
+.|++++|+++++||+|||++++|+.||++|++++|+|||+++||.++|+++|+....
T Consensus 514 ----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~ 583 (884)
T TIGR01522 514 ----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM 583 (884)
T ss_pred ----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC
Confidence 2478999999999999999999999999999999999999999999999999997422
Q ss_pred ------------cccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcc
Q psy11923 283 ------------VQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKA 350 (492)
Q Consensus 283 ------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~ 350 (492)
..+++.+|++| ...+..+++ .++.|+|+| ||+||+||++
T Consensus 584 ~~~~l~~~~~~~~Vfar~~P~~K-~~iv~~lq~-----------~g~~v~mvG-----------------DGvND~pAl~ 634 (884)
T TIGR01522 584 DDQQLSQIVPKVAVFARASPEHK-MKIVKALQK-----------RGDVVAMTG-----------------DGVNDAPALK 634 (884)
T ss_pred CHHHHHHHhhcCeEEEECCHHHH-HHHHHHHHH-----------CCCEEEEEC-----------------CCcccHHHHH
Confidence 36777888888 334444442 245666665 5599999999
Q ss_pred eeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHHH
Q psy11923 351 AVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGTV 430 (492)
Q Consensus 351 ~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~ 430 (492)
.||+| |+||.+|+|+|+++||+++++|||+.+++++++||++|+||++++.|.++.|+..+++.+++.+++.|.|++++
T Consensus 635 ~AdVG-ia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 713 (884)
T TIGR01522 635 LADIG-VAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAM 713 (884)
T ss_pred hCCee-EecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHH
Confidence 99999 99997799999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHhhhhcccCcCCCCCCC
Q psy11923 431 TILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 431 ~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
|++|+|+++|.+|++++++++|+
T Consensus 714 qiL~inl~~d~~~a~~l~~e~~~ 736 (884)
T TIGR01522 714 QILWINILMDGPPAQSLGVEPVD 736 (884)
T ss_pred HHHHHHHHHHhhHHHHhccCCCC
Confidence 99999999999999998876665
No 12
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.5e-69 Score=604.85 Aligned_cols=422 Identities=30% Similarity=0.406 Sum_probs=350.0
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCC-----------------------------------CCCchHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDT-----------------------------------GETPIAKEIHHFIH 45 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~ 45 (492)
|++|+++++|++||.+|.+|||.+++.+.+. .+||+|+.+++++.
T Consensus 205 V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~ 284 (1053)
T TIGR01523 205 VTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAV 284 (1053)
T ss_pred EEeeeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHH
Confidence 5789999999999999999999999864321 24999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEE
Q psy11923 46 IITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTI 125 (492)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i 125 (492)
+++.+++++++++++.... ..+...+.++++++++++|++||++++++++.++++|+|+|+++|+++++|+||++++|
T Consensus 285 ~l~~i~~~~~~~~~~~~~~--~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvI 362 (1053)
T TIGR01523 285 ILFCIAIIFAIIVMAAHKF--DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDI 362 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEE
Confidence 9888888888777665432 12356778899999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCccCCCceEEEcC--------------------------------------------------------------
Q psy11923 126 CSDKTGTLTQNRMTTEDP-------------------------------------------------------------- 143 (492)
Q Consensus 126 ~~DKTGTLT~~~~~v~~~-------------------------------------------------------------- 143 (492)
|+|||||||+|+|+|.+.
T Consensus 363 CsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1053)
T TIGR01523 363 CSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDI 442 (1053)
T ss_pred EecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999965310
Q ss_pred ----------------------C---------------------------------------------------------
Q psy11923 144 ----------------------N--------------------------------------------------------- 144 (492)
Q Consensus 144 ----------------------~--------------------------------------------------------- 144 (492)
.
T Consensus 443 ~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1053)
T TIGR01523 443 DMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGS 522 (1053)
T ss_pred ccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccc
Confidence 0
Q ss_pred ------------------------C-C-ceEEEEeCChHHHHHhccccccCC--eeccCCHHHHHHHHHHHHHHhhcCce
Q psy11923 145 ------------------------D-P-RHLEVMKGAPERILDKCSTIFING--KEKVLDEEMREAFNNAYYELGGLGER 196 (492)
Q Consensus 145 ------------------------~-~-~~~~~~kGa~e~il~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~G~r 196 (492)
+ + ++.+++||+||.++++|......+ ...|++++.++.+.+..++++.+|+|
T Consensus 523 ~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlR 602 (1053)
T TIGR01523 523 AQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLR 602 (1053)
T ss_pred cccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCe
Confidence 0 0 135789999999999998765322 35789998899999999999999999
Q ss_pred EEEeeeeccCCCCCCCC-CccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhh
Q psy11923 197 VLGFCDLLLPADKFPLG-FKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEAD 275 (492)
Q Consensus 197 ~l~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~ 275 (492)
+|++|++.++.+++... ........+..|.|++++|+++++||+|||++++|+.||++||+|+|+|||++.||.+||++
T Consensus 603 vLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~ 682 (1053)
T TIGR01523 603 VLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE 682 (1053)
T ss_pred EEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 99999998876432211 00000111246789999999999999999999999999999999999999999999999999
Q ss_pred ccccccc----------------------------------cccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeee
Q psy11923 276 TTEDQSG----------------------------------VQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGI 321 (492)
Q Consensus 276 ~gi~~~~----------------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 321 (492)
+|+.... ..+++++|++|. ..+..+++ .++.|+
T Consensus 683 ~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~-~iV~~lq~-----------~g~~Va- 749 (1053)
T TIGR01523 683 VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKV-KMIEALHR-----------RKAFCA- 749 (1053)
T ss_pred cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHH-HHHHHHHh-----------cCCeeE-
Confidence 9996421 134555555552 22222221 134444
Q ss_pred ecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHH
Q psy11923 322 ISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSI 401 (492)
Q Consensus 322 ~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~ 401 (492)
|+|||+||+||++.||+| ||||++|+|+|+++||++|++|||+++++++++||++|+||++++
T Consensus 750 ----------------m~GDGvNDapaLk~AdVG-IAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i 812 (1053)
T TIGR01523 750 ----------------MTGDGVNDSPSLKMANVG-IAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFV 812 (1053)
T ss_pred ----------------EeCCCcchHHHHHhCCcc-EecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 455669999999999999 999989999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHhc----C-CCChHHHHHHHHHHhhhhcccCcCCCCCCCc
Q psy11923 402 AYTLTSNIPEISPFLTFILLD----I-PLPLGTVTILCIDLGTDMELTWQGKTHIPEI 454 (492)
Q Consensus 402 ~~~~~~ni~~~~~~~~~~~~~----~-~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~~ 454 (492)
.|.++.|+.++++.+++.+++ . |+|++++|++|+|+++|.+|+++++.++|+-
T Consensus 813 ~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~ 870 (1053)
T TIGR01523 813 LHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAP 870 (1053)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCCh
Confidence 999999999999998888873 3 5899999999999999999999988877663
No 13
>KOG0203|consensus
Probab=100.00 E-value=2.7e-72 Score=574.32 Aligned_cols=443 Identities=70% Similarity=1.053 Sum_probs=389.8
Q ss_pred cceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q psy11923 2 VTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGIIV 81 (492)
Q Consensus 2 ~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv 81 (492)
++|.++|+|++||.+|.+|+|+.+...-+..++|+++.++++..++...++.+++.+|++....+++|..++.+.+++++
T Consensus 246 veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iiv 325 (1019)
T KOG0203|consen 246 VEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIV 325 (1019)
T ss_pred ecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEE
Confidence 68999999999999999999999999888999999999999999999999999999998888889999999999999999
Q ss_pred HhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEE---------------------
Q psy11923 82 ANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTT--------------------- 140 (492)
Q Consensus 82 ~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v--------------------- 140 (492)
+.+|++|+..++..+....++|+++++++||+.+.|+||...++|+|||||||+|+|+|
T Consensus 326 AnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~ 405 (1019)
T KOG0203|consen 326 ANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQ 405 (1019)
T ss_pred ecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 141 -------------------------------------------------------------------------------- 140 (492)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (492)
T Consensus 406 ~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyq 485 (1019)
T KOG0203|consen 406 SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQ 485 (1019)
T ss_pred cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceE
Confidence
Q ss_pred ------EcCCCCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCC
Q psy11923 141 ------EDPNDPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGF 214 (492)
Q Consensus 141 ------~~~~~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~ 214 (492)
.+..+.++.+.+||+||.++++|+++..++.++|+++...+.+.+...++.+.|.|+++++++.++++++++..
T Consensus 486 lsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~ 565 (1019)
T KOG0203|consen 486 LSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGF 565 (1019)
T ss_pred EEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCce
Confidence 11234578899999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccc----------
Q psy11923 215 KFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQ---------- 284 (492)
Q Consensus 215 ~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~---------- 284 (492)
..+.+...+.-.|+.++|++++-||+|..+++++..||.+||||+|+|||++.||++||+++||..++.+
T Consensus 566 ~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~ 645 (1019)
T KOG0203|consen 566 QFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLN 645 (1019)
T ss_pred EeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcC
Confidence 8888888888899999999999999999999999999999999999999999999999999997543321
Q ss_pred --------------------cccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccC
Q psy11923 285 --------------------YDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVN 344 (492)
Q Consensus 285 --------------------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvn 344 (492)
+.++++ |.+..+...+....+-+-+++ ++.-++ ++-+ ..-+-+..+|||+|
T Consensus 646 ~~v~~vn~~~a~a~VihG~eL~~~~~--~qld~il~nh~eIVFARTSPq---QKLiIV-e~cQ---r~GaiVaVTGDGVN 716 (1019)
T KOG0203|consen 646 IPVEQVNSRDAKAAVIHGSELPDMSS--EQLDELLQNHQEIVFARTSPQ---QKLIIV-EGCQ---RQGAIVAVTGDGVN 716 (1019)
T ss_pred CcccccCccccceEEEecccccccCH--HHHHHHHHhCCceEEEecCcc---ceEEeE-hhhh---hcCcEEEEeCCCcC
Confidence 111111 123333333333222222221 111111 1100 00011235578899
Q ss_pred hhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCC
Q psy11923 345 PREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIP 424 (492)
Q Consensus 345 d~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~ 424 (492)
|+||++.||+| ||||++|+|++++|||++|+||||++++.-+++||-+|+|.||.+.|.+..|+.++.++++++++|+|
T Consensus 717 DsPALKKADIG-VAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giP 795 (1019)
T KOG0203|consen 717 DSPALKKADIG-VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIP 795 (1019)
T ss_pred CChhhcccccc-eeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCC
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhhhcccCcCCCCCCCc
Q psy11923 425 LPLGTVTILCIDLGTDMELTWQGKTHIPEI 454 (492)
Q Consensus 425 ~~~~~~~~l~~~l~~~~~~~~~l~~~~p~~ 454 (492)
+|++++++|.+++.+|++|++.|.+|.||.
T Consensus 796 LplgtitIL~IDLgTDmvPAiSLAYE~aEs 825 (1019)
T KOG0203|consen 796 LPLGTVTILCIDLGTDIVPAISLAYEKAES 825 (1019)
T ss_pred cccchhhhhhhHhhcccchhhhHhccCchh
Confidence 999999999999999999999999998885
No 14
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.6e-68 Score=592.40 Aligned_cols=421 Identities=34% Similarity=0.539 Sum_probs=354.0
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCcH----H
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFAL------GYHW----L 70 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~ 70 (492)
|++|+++++|++||.+|.+|||.+++++++.+++|+|+.+++++.+++.+.++++++.++++... +.+| .
T Consensus 158 v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 237 (917)
T TIGR01116 158 VVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAI 237 (917)
T ss_pred EecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHH
Confidence 46899999999999999999999999999999999999999999999888877777766655322 1223 3
Q ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-------
Q psy11923 71 DAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP------- 143 (492)
Q Consensus 71 ~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~------- 143 (492)
..+..++++++++|||+|+++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+.
T Consensus 238 ~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~ 317 (917)
T TIGR01116 238 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSS 317 (917)
T ss_pred HHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcc
Confidence 3555678899999999999999999999999999999999999999999999999999999999999987211
Q ss_pred ----------------------------------------------------C---------------------------
Q psy11923 144 ----------------------------------------------------N--------------------------- 144 (492)
Q Consensus 144 ----------------------------------------------------~--------------------------- 144 (492)
.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~ 397 (917)
T TIGR01116 318 SSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPA 397 (917)
T ss_pred cccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCc
Confidence 0
Q ss_pred --------------------------------------------CCceEEEEeCChHHHHHhccccccC-CeeccCCHHH
Q psy11923 145 --------------------------------------------DPRHLEVMKGAPERILDKCSTIFIN-GKEKVLDEEM 179 (492)
Q Consensus 145 --------------------------------------------~~~~~~~~kGa~e~il~~~~~~~~~-~~~~~l~~~~ 179 (492)
++++.+++||+||.++++|+++..+ +...|++++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~ 477 (917)
T TIGR01116 398 TKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKM 477 (917)
T ss_pred hhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHH
Confidence 0114578999999999999987654 6778999998
Q ss_pred HHHHHHHHHHHhh-cCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeE
Q psy11923 180 REAFNNAYYELGG-LGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKV 258 (492)
Q Consensus 180 ~~~~~~~~~~~~~-~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v 258 (492)
++++.+..++++. +|+|++++|++.++.++... ...+....+.+|.|++++|+++++||+|||++++|+.||++|+++
T Consensus 478 ~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v 556 (917)
T TIGR01116 478 KNTILSVIKEMGTTKALRCLALAFKDIPDPREED-LLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRV 556 (917)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-ccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEE
Confidence 9999999999999 99999999999886542211 011112234568899999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHhhccccccc----------------------------cccccCChhHHHHHHHHhhhhhhcccCC
Q psy11923 259 IMVTGDHPITAKIIEADTTEDQSG----------------------------VQYDRTSPGFKALARIATLCNRAEFKGG 310 (492)
Q Consensus 259 ~mlTGD~~~tA~~ia~~~gi~~~~----------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 310 (492)
+|+|||+++||.++|+++|+...+ ..+++++|++|. ..+..++
T Consensus 557 ~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~-~iV~~lq-------- 627 (917)
T TIGR01116 557 IMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKS-ELVELLQ-------- 627 (917)
T ss_pred EEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHH-HHHHHHH--------
Confidence 999999999999999999996422 234444555542 1111111
Q ss_pred CchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhh
Q psy11923 311 QDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 390 (492)
Q Consensus 311 ~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~g 390 (492)
+.++.|+ |+|||+||.||++.|++| |+|| +|+|+++++||+++.+|||+++++++++|
T Consensus 628 ---~~g~~va-----------------~iGDG~ND~~alk~AdVG-ia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~G 685 (917)
T TIGR01116 628 ---EQGEIVA-----------------MTGDGVNDAPALKKADIG-IAMG-SGTEVAKEASDMVLADDNFATIVAAVEEG 685 (917)
T ss_pred ---hcCCeEE-----------------EecCCcchHHHHHhCCee-EECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHH
Confidence 1133444 456679999999999999 9999 99999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 391 RLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 391 R~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
|++|+|+++++.|.++.|+..+++.+++.+++.|.|++++|++|+|+++|++|+++++.++|+
T Consensus 686 R~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~ 748 (917)
T TIGR01116 686 RAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPD 748 (917)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999989999999999999999999999999997665554
No 15
>KOG0207|consensus
Probab=100.00 E-value=9e-68 Score=548.85 Aligned_cols=371 Identities=22% Similarity=0.312 Sum_probs=315.3
Q ss_pred ceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------cHHH
Q psy11923 3 TSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGY-----------HWLD 71 (492)
Q Consensus 3 ~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 71 (492)
.|.....++++|.||.++||.+++++++..|+|+||.+|+++.+|+|.++++++.+|++|.+.+. .+..
T Consensus 452 nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~ 531 (951)
T KOG0207|consen 452 NGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSH 531 (951)
T ss_pred CceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999988764 3567
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEE
Q psy11923 72 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEV 151 (492)
Q Consensus 72 ~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~ 151 (492)
++..+++|++++|||+|++++|++...+....+++|+|+|+++.+|.+.++++|+||||||||+|++.|.+...-...
T Consensus 532 a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~-- 609 (951)
T KOG0207|consen 532 AFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP-- 609 (951)
T ss_pred HHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc--
Confidence 899999999999999999999999999999999999999999999999999999999999999999999774211110
Q ss_pred EeCChH-HHHHhccccccCCeeccCCHHHHHHHHH-----------HHHHHhhcCce--EEEee-eeccCCCCCCC----
Q psy11923 152 MKGAPE-RILDKCSTIFINGKEKVLDEEMREAFNN-----------AYYELGGLGER--VLGFC-DLLLPADKFPL---- 212 (492)
Q Consensus 152 ~kGa~e-~il~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~~G~r--~l~~a-~~~l~~~~~~~---- 212 (492)
-++ +.+.... ..+.+++||++.++.++.++ ..++++++|.. +.-.+ ...+++.++..
T Consensus 610 ---~~~~e~l~~v~-a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~ 685 (951)
T KOG0207|consen 610 ---ISLKEALALVA-AMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGC 685 (951)
T ss_pred ---ccHHHHHHHHH-HHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEEeechHHHHHhcCC
Confidence 123 3333333 33489999999999998775 35677788832 21111 12222222211
Q ss_pred -----------CCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccccc
Q psy11923 213 -----------GFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQS 281 (492)
Q Consensus 213 -----------~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~ 281 (492)
..+..+++..++..|++++|++.++|++|||+..+|+.||++|++++|+||||..+|+++|+++|++.
T Consensus 686 ~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~- 764 (951)
T KOG0207|consen 686 SIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN- 764 (951)
T ss_pred CCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-
Confidence 11234556777889999999999999999999999999999999999999999999999999999776
Q ss_pred ccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccc
Q psy11923 282 GVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGI 361 (492)
Q Consensus 282 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~ 361 (492)
++++..|++|. +.++++|+. ++.|+|+| ||+||+|||++||+| |+||
T Consensus 765 --V~aev~P~~K~-~~Ik~lq~~-----------~~~VaMVG-----------------DGINDaPALA~AdVG-Iaig- 811 (951)
T KOG0207|consen 765 --VYAEVLPEQKA-EKIKEIQKN-----------GGPVAMVG-----------------DGINDAPALAQADVG-IAIG- 811 (951)
T ss_pred --EEeccCchhhH-HHHHHHHhc-----------CCcEEEEe-----------------CCCCccHHHHhhccc-eeec-
Confidence 99999999994 666666643 45677665 559999999999999 9999
Q ss_pred cchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHH
Q psy11923 362 AGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEIS 413 (492)
Q Consensus 362 ~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~ 413 (492)
.|+|+|.++||+||+++|+..++.+++++|++++|||+|+.|++.||+..+.
T Consensus 812 ~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~Ip 863 (951)
T KOG0207|consen 812 AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIP 863 (951)
T ss_pred cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh
Confidence 8999999999999999999999999999999999999999999999997653
No 16
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=9.7e-64 Score=562.80 Aligned_cols=425 Identities=18% Similarity=0.210 Sum_probs=328.9
Q ss_pred ceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q psy11923 3 TSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGIIVA 82 (492)
Q Consensus 3 ~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~ 82 (492)
+|.+.++|++||.+|..||+.+++..++..++++++.+.++...+..++++.++.+++.....+.++...+.++++++++
T Consensus 329 ~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~ 408 (1054)
T TIGR01657 329 DTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITI 408 (1054)
T ss_pred CCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHh
Confidence 37899999999999999999999988888899999999988887766555544444443344456788999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-------------------
Q psy11923 83 NVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP------------------- 143 (492)
Q Consensus 83 ~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~------------------- 143 (492)
++||+||+++++++..+..+|+|+|++||++.++|.+|++|++|||||||||+|+|+|...
T Consensus 409 ~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~ 488 (1054)
T TIGR01657 409 VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSL 488 (1054)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999987110
Q ss_pred ------------------------------------------C-------------------------------------
Q psy11923 144 ------------------------------------------N------------------------------------- 144 (492)
Q Consensus 144 ------------------------------------------~------------------------------------- 144 (492)
.
T Consensus 489 ~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMs 568 (1054)
T TIGR01657 489 KPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMS 568 (1054)
T ss_pred CchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEE
Confidence 0
Q ss_pred -------CCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccC
Q psy11923 145 -------DPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFD 217 (492)
Q Consensus 145 -------~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~ 217 (492)
++++++++|||||.|+++|... ..++++.+..++++.+|+|++++|++.+++.++.+..+.
T Consensus 569 vvv~~~~~~~~~~~~KGApE~Il~~c~~~-----------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~- 636 (1054)
T TIGR01657 569 VIVSTNDERSPDAFVKGAPETIQSLCSPE-----------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDL- 636 (1054)
T ss_pred EEEEEcCCCeEEEEEECCHHHHHHHcCCc-----------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhc-
Confidence 0124588999999999999731 234567778899999999999999998874332211111
Q ss_pred CCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccc--ccc--------
Q psy11923 218 CDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQ--YDR-------- 287 (492)
Q Consensus 218 ~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~--~~~-------- 287 (492)
+.+.+|.|++++|+++++||+||+++++|+.||++||+++|+||||+.||.+||+++|+...+.. ..+
T Consensus 637 --~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~ 714 (1054)
T TIGR01657 637 --SRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGK 714 (1054)
T ss_pred --cHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCC
Confidence 12346789999999999999999999999999999999999999999999999999999643210 000
Q ss_pred --------CCh-----------hH--------------------HHHHHHHhhhhhhcccCCCchhhcceeeeecC-Ccc
Q psy11923 288 --------TSP-----------GF--------------------KALARIATLCNRAEFKGGQDGAIAKSVGIISE-GNE 327 (492)
Q Consensus 288 --------~~~-----------~~--------------------k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd-~~~ 327 (492)
... .. +.+..+.+..+. .-.+..+++.+..+ .++
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~------~l~~~~~~~~VfAR~sP~ 788 (1054)
T TIGR01657 715 PNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPE------LLLRLLSHTTVFARMAPD 788 (1054)
T ss_pred CceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHH------HHHHHHhcCeEEEecCHH
Confidence 000 00 000000000000 00011122222222 223
Q ss_pred cHHHHHH-------hcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHH
Q psy11923 328 TVEDIAL-------RLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKS 400 (492)
Q Consensus 328 ~~~~~~~-------~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~ 400 (492)
++..+.+ .++|+|||+||+||++.||+| |||| ++|++ .+||+++.+++|+++++++++||+++.|+++.
T Consensus 789 qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVG-Iam~--~~das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~ 864 (1054)
T TIGR01657 789 QKETLVELLQKLDYTVGMCGDGANDCGALKQADVG-ISLS--EAEAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQM 864 (1054)
T ss_pred HHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcc-eeec--cccce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3333222 245888999999999999999 9998 34655 79999999999999999999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCCCCCC
Q psy11923 401 IAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKTHIPE 453 (492)
Q Consensus 401 ~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~ 453 (492)
+.|.+.|++..++..++..+. +.+++++|++|+|++++.+++++++.++|+
T Consensus 865 ~~~~~~~~~~~~~~~~~l~~~--~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~ 915 (1054)
T TIGR01657 865 FKYMALYSLIQFYSVSILYLI--GSNLGDGQFLTIDLLLIFPVALLMSRNKPL 915 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHc--cCcCccHHHHHHHHHHHHHHHHHHHcCCch
Confidence 999999999887666555444 478999999999999999999997776665
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.3e-61 Score=509.45 Aligned_cols=408 Identities=20% Similarity=0.244 Sum_probs=311.6
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
+++|+++++|+++|.+|++|||.+++++++.+|+|+|.....+...++.++ ++.+.+..++....++...+.+.+++.
T Consensus 179 v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~--l~~~~~~~~~~~~~~~~~~~~~~val~ 256 (673)
T PRK14010 179 VASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIF--LVVILTMYPLAKFLNFNLSIAMLIALA 256 (673)
T ss_pred eecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHH--HHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999977665544332221 111111111111124455677788888
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcC-----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDP----------------- 143 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~----------------- 143 (492)
+.+|||+|+..+|++...++++++|+|+++|+++++|++|++|++|||||||||+|++.+.+.
T Consensus 257 V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~ 336 (673)
T PRK14010 257 VCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYE 336 (673)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999987665110
Q ss_pred ----------------------C-----------C-C--------ceEEEEeCChHHHHHhccccccCCeeccCCHHHHH
Q psy11923 144 ----------------------N-----------D-P--------RHLEVMKGAPERILDKCSTIFINGKEKVLDEEMRE 181 (492)
Q Consensus 144 ----------------------~-----------~-~--------~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~ 181 (492)
. + . +...+.||+++.++++|.. .+...|.
T Consensus 337 ~~~~s~~P~~~AIv~~a~~~~~~~~~~~~~~~pF~~~~k~~gv~~~g~~i~kGa~~~il~~~~~---~g~~~~~------ 407 (673)
T PRK14010 337 SSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTREVYKGAPNSMVKRVKE---AGGHIPV------ 407 (673)
T ss_pred hcCCCCChHHHHHHHHHHHcCCCchhhhcceeccccccceeEEEECCEEEEECCHHHHHHHhhh---cCCCCch------
Confidence 0 0 0 0113558888888777763 1111111
Q ss_pred HHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEE
Q psy11923 182 AFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMV 261 (492)
Q Consensus 182 ~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~ml 261 (492)
.+.+..++++.+|.|+++++ .|++++|+++++||+|||++++|++||++||+++|+
T Consensus 408 ~~~~~~~~~a~~G~~~l~v~------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMi 463 (673)
T PRK14010 408 DLDALVKGVSKKGGTPLVVL------------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMC 463 (673)
T ss_pred HHHHHHHHHHhCCCeEEEEE------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEE
Confidence 23444566778888887643 367899999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCccc
Q psy11923 262 TGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVS 341 (492)
Q Consensus 262 TGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~d 341 (492)
||||+.||.+||+++|+++ .+++++||+| +..++.+|++ ++.|+|+|||
T Consensus 464 TGDn~~TA~aIA~elGI~~---v~A~~~PedK-~~iV~~lQ~~-----------G~~VaMtGDG---------------- 512 (673)
T PRK14010 464 TGDNELTAATIAKEAGVDR---FVAECKPEDK-INVIREEQAK-----------GHIVAMTGDG---------------- 512 (673)
T ss_pred CCCCHHHHHHHHHHcCCce---EEcCCCHHHH-HHHHHHHHhC-----------CCEEEEECCC----------------
Confidence 9999999999999999986 8999999999 4666676643 6778877654
Q ss_pred ccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHh
Q psy11923 342 EVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILL 421 (492)
Q Consensus 342 gvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~ 421 (492)
+||+|||+.||+| |||| +|+|+|+++||+||++|||+++++++++||++|.|+++++.|.+..|+......+...|.
T Consensus 513 -vNDAPALa~ADVG-IAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 513 -TNDAPALAEANVG-LAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred -hhhHHHHHhCCEE-EEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 9999999999999 9999 999999999999999999999999999999999999999999999999998776665555
Q ss_pred cC-C-----------CChHHHH-HHHHH-HhhhhcccCcCC--CCCCCccchheeeeeccccccceeeeeee
Q psy11923 422 DI-P-----------LPLGTVT-ILCID-LGTDMELTWQGK--THIPEISPFLTFILLDIPLPLGTVTILCI 477 (492)
Q Consensus 422 ~~-~-----------~~~~~~~-~l~~~-l~~~~~~~~~l~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (492)
.. | +|-+.+. -+.+| ++.-.+.++++. .-.|.....++.+-+.+|...+.+.-|..
T Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (673)
T PRK14010 590 AAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGLGGMIVPFIG 661 (673)
T ss_pred HhcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEeccCceeehhhH
Confidence 32 2 3333222 12233 333334444432 23355555566555566777776655543
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.3e-60 Score=499.25 Aligned_cols=407 Identities=21% Similarity=0.237 Sum_probs=309.7
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
+++|+++++|+++|.+|.+|||.+++++++.+|+|+|+..+.+...++.+++++++..+..+++.+.. .++.++++++
T Consensus 179 v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~--~~l~~~iall 256 (679)
T PRK01122 179 VLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGA--LSITVLVALL 256 (679)
T ss_pred EEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch--HHHHHHHHHH
Confidence 46899999999999999999999999999999999999888877776655544443333332233333 3788899999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCC----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPN---------------- 144 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~---------------- 144 (492)
+++|||+|+.++|+....++++++|+|+++|+++++|++|++|++|||||||||+|+|++.+..
T Consensus 257 V~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~ 336 (679)
T PRK01122 257 VCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQL 336 (679)
T ss_pred HHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999972210
Q ss_pred --------------------------C------------C---------ceEEEEeCChHHHHHhccccccCCeeccCCH
Q psy11923 145 --------------------------D------------P---------RHLEVMKGAPERILDKCSTIFINGKEKVLDE 177 (492)
Q Consensus 145 --------------------------~------------~---------~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~ 177 (492)
+ . +...+.||++|.+++.|.. ++..
T Consensus 337 ~s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~---~g~~----- 408 (679)
T PRK01122 337 SSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVES---NGGH----- 408 (679)
T ss_pred hcCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHh---cCCc-----
Confidence 0 0 0124566777777666642 1111
Q ss_pred HHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCe
Q psy11923 178 EMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK 257 (492)
Q Consensus 178 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~ 257 (492)
+.+++++..++++.+|.|+++++ .|++++|+++++|++|||++++|++||++||+
T Consensus 409 -~~~~~~~~~~~~a~~G~~~l~va------------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~ 463 (679)
T PRK01122 409 -FPAELDAAVDEVARKGGTPLVVA------------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIK 463 (679)
T ss_pred -ChHHHHHHHHHHHhCCCcEEEEE------------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCe
Confidence 12345556677788888888877 35789999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcC
Q psy11923 258 VIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLN 337 (492)
Q Consensus 258 v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~ 337 (492)
++|+||||+.||.+||+++|+++ .+++++||+| ...++++|++ ++.|+|+||
T Consensus 464 vvMiTGDn~~TA~aIA~elGId~---v~A~~~PedK-~~iV~~lQ~~-----------G~~VaMtGD------------- 515 (679)
T PRK01122 464 TVMITGDNPLTAAAIAAEAGVDD---FLAEATPEDK-LALIRQEQAE-----------GRLVAMTGD------------- 515 (679)
T ss_pred EEEECCCCHHHHHHHHHHcCCcE---EEccCCHHHH-HHHHHHHHHc-----------CCeEEEECC-------------
Confidence 99999999999999999999986 8999999999 4667777643 677887765
Q ss_pred CcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy11923 338 IPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLT 417 (492)
Q Consensus 338 ~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~ 417 (492)
|+||+||++.||+| |||| +|+|+|+++||+|+++|||+++++++++||++.-+--..-.|++. |-+.--+.++
T Consensus 516 ----GvNDAPALa~ADVG-IAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~ 588 (679)
T PRK01122 516 ----GTNDAPALAQADVG-VAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAII 588 (679)
T ss_pred ----CcchHHHHHhCCEe-EEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHH
Confidence 49999999999999 9999 999999999999999999999999999999999555555566655 4443223233
Q ss_pred HHHhc-------------CCCChHHHH-HHHHH-HhhhhcccCcCC--CCCCCccchheeeeeccccccceeeeeee
Q psy11923 418 FILLD-------------IPLPLGTVT-ILCID-LGTDMELTWQGK--THIPEISPFLTFILLDIPLPLGTVTILCI 477 (492)
Q Consensus 418 ~~~~~-------------~~~~~~~~~-~l~~~-l~~~~~~~~~l~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (492)
+.+|. +-+|-+.+. -+.+| ++.-.+.++++. .-.|.....++.+-+.+|...+.+.-|..
T Consensus 589 p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (679)
T PRK01122 589 PAMFAATYPQLNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGLGGLIVPFIG 665 (679)
T ss_pred HHHHHhhCccccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecCCceeehhhH
Confidence 22222 123333332 12233 333344444432 23455555566565567777776665543
No 19
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.5e-59 Score=510.57 Aligned_cols=374 Identities=22% Similarity=0.285 Sum_probs=311.3
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAF-ALGYHWLDAVIFLIGI 79 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v 79 (492)
+++|.++++|+++|.+|.++||.+++++++.+|+|+|+.+|+++.+++++++++++++|++|+ +.+.+|..++.+++++
T Consensus 314 ~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~sv 393 (741)
T PRK11033 314 SVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTL 393 (741)
T ss_pred EcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999884 4466788899999999
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeC-ChHH
Q psy11923 80 IVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKG-APER 158 (492)
Q Consensus 80 lv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kG-a~e~ 158 (492)
++++|||+|.+++|+++..+..+++|+|+++|+++++|+++++|++|||||||||+|+|+|.+... ..+ .+++
T Consensus 394 lviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~------~~~~~~~~ 467 (741)
T PRK11033 394 LLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHP------ATGISESE 467 (741)
T ss_pred HHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEe------cCCCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999977421 123 4566
Q ss_pred HHHhccccccCCeeccCCHHHHHHHHHH---------HHHHhhcCceEE-EeeeeccCCCCCCCC-----------CccC
Q psy11923 159 ILDKCSTIFINGKEKVLDEEMREAFNNA---------YYELGGLGERVL-GFCDLLLPADKFPLG-----------FKFD 217 (492)
Q Consensus 159 il~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~G~r~l-~~a~~~l~~~~~~~~-----------~~~~ 217 (492)
++..+...+ +++.||+++++.++.++. .+..++.|++.. ......++..++..+ .+..
T Consensus 468 ~l~~aa~~e-~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 546 (741)
T PRK11033 468 LLALAAAVE-QGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQINELESA 546 (741)
T ss_pred HHHHHHHHh-cCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEEEEEecchhhhhccHHHHHHHHHHHhC
Confidence 777776554 778999999998876532 122334454321 011112222222110 1123
Q ss_pred CCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHH
Q psy11923 218 CDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALAR 297 (492)
Q Consensus 218 ~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~ 297 (492)
+....++..|++++|+++++|++|||++++|++||++|++++|+|||++.+|.++|+++|++ .+.+..|++|. ..
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----~~~~~~p~~K~-~~ 621 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----FRAGLLPEDKV-KA 621 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----eecCCCHHHHH-HH
Confidence 34456777899999999999999999999999999999999999999999999999999997 46678899884 44
Q ss_pred HHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccC
Q psy11923 298 IATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLD 377 (492)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~ 377 (492)
+.++++ .+.|.|+| ||+||.||++.|++| |+|| +|+|+++++||+++++
T Consensus 622 v~~l~~------------~~~v~mvG-----------------DgiNDapAl~~A~vg-ia~g-~~~~~a~~~adivl~~ 670 (741)
T PRK11033 622 VTELNQ------------HAPLAMVG-----------------DGINDAPAMKAASIG-IAMG-SGTDVALETADAALTH 670 (741)
T ss_pred HHHHhc------------CCCEEEEE-----------------CCHHhHHHHHhCCee-EEec-CCCHHHHHhCCEEEec
Confidence 444442 13566666 459999999999999 9999 9999999999999999
Q ss_pred CCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy11923 378 DNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLT 417 (492)
Q Consensus 378 ~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~ 417 (492)
+++..+++++++||++++||+||+.|++.||++.+.+.++
T Consensus 671 ~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 671 NRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLL 710 (741)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999976655443
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.6e-56 Score=473.05 Aligned_cols=408 Identities=21% Similarity=0.254 Sum_probs=312.1
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
+++|+++++|+++|++|++|||.+++++++.+|+|+|...+.+..++..+++++.+.++. +..+. ....++..+++++
T Consensus 180 v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~-~~~~~-~~~~~~~~lvall 257 (675)
T TIGR01497 180 ILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWP-FAAYG-GNAISVTVLVALL 257 (675)
T ss_pred EEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhc-ChhHHHHHHHHHH
Confidence 468999999999999999999999999999999999988887776654433333222111 11122 2234677889999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCC----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPN---------------- 144 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~---------------- 144 (492)
+++|||+|+..++.....++++++|+|+++|+++++|++|++|++|||||||||+|+|++.+..
T Consensus 258 V~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~ 337 (675)
T TIGR01497 258 VCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQL 337 (675)
T ss_pred HHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHH
Confidence 9999999988888888899999999999999999999999999999999999999999982110
Q ss_pred ---------------------------------------C--------CceEEEEeCChHHHHHhccccccCCeeccCCH
Q psy11923 145 ---------------------------------------D--------PRHLEVMKGAPERILDKCSTIFINGKEKVLDE 177 (492)
Q Consensus 145 ---------------------------------------~--------~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~ 177 (492)
. .+...+.||++|.+++.|.. ++.. .
T Consensus 338 ~~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~---~g~~--~-- 410 (675)
T TIGR01497 338 ASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEA---NGGH--I-- 410 (675)
T ss_pred hcCCCCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHh---cCCC--C--
Confidence 0 01134667777777776642 1111 1
Q ss_pred HHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCe
Q psy11923 178 EMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK 257 (492)
Q Consensus 178 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~ 257 (492)
.+.+++..++++.+|.|++++++ |++++|+++++|++|||++++|++||++|++
T Consensus 411 --~~~~~~~~~~~a~~G~r~l~va~------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~ 464 (675)
T TIGR01497 411 --PTDLDQAVDQVARQGGTPLVVCE------------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIK 464 (675)
T ss_pred --cHHHHHHHHHHHhCCCeEEEEEE------------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCE
Confidence 13355567788889999998873 3589999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcC
Q psy11923 258 VIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLN 337 (492)
Q Consensus 258 v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~ 337 (492)
++|+||||+.+|.++|+++|+++ .+++++|++| ...+.++|++ ++.|+|+||
T Consensus 465 v~miTGD~~~ta~~iA~~lGI~~---v~a~~~PedK-~~~v~~lq~~-----------g~~VamvGD------------- 516 (675)
T TIGR01497 465 TIMITGDNRLTAAAIAAEAGVDD---FIAEATPEDK-IALIRQEQAE-----------GKLVAMTGD------------- 516 (675)
T ss_pred EEEEcCCCHHHHHHHHHHcCCCE---EEcCCCHHHH-HHHHHHHHHc-----------CCeEEEECC-------------
Confidence 99999999999999999999986 7899999999 4566666543 456777665
Q ss_pred CcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy11923 338 IPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLT 417 (492)
Q Consensus 338 ~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~ 417 (492)
|+||+||++.||+| +||| +|+++|+++||+++++|||+++++++++||+++-+......|++..++.-...++-
T Consensus 517 ----G~NDapAL~~AdvG-iAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~ 590 (675)
T TIGR01497 517 ----GTNDAPALAQADVG-VAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIP 590 (675)
T ss_pred ----CcchHHHHHhCCEe-EEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHHH
Confidence 59999999999999 9999 99999999999999999999999999999999999999999999888875433333
Q ss_pred HHHhc------------CCCChHHHH-HHHHH-HhhhhcccCcCC--CCCCCccchheeeeeccccccceeeeeee
Q psy11923 418 FILLD------------IPLPLGTVT-ILCID-LGTDMELTWQGK--THIPEISPFLTFILLDIPLPLGTVTILCI 477 (492)
Q Consensus 418 ~~~~~------------~~~~~~~~~-~l~~~-l~~~~~~~~~l~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (492)
.+|.. +-+|-+.+. -+.+| ++.-.+.++++. .-.|.....++.+-+.+|...+.+.-|..
T Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (675)
T TIGR01497 591 AIFAAAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLRRNLWIYGLGGLIVPFIG 666 (675)
T ss_pred HHHHhhCcchhhhccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhceEEecCCceeeehhh
Confidence 33322 113333322 12233 333334444432 23455555566666667777776666654
No 21
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.1e-56 Score=475.57 Aligned_cols=368 Identities=21% Similarity=0.300 Sum_probs=305.3
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
+.+|.++++|+++|.+|.+|||.+++++++.+|+|+++.+|+++.++++++++++++.++.|. .++.++++++
T Consensus 163 ~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------~~~~~~~svl 235 (562)
T TIGR01511 163 NGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------FALEFAVTVL 235 (562)
T ss_pred ECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHH
Confidence 367999999999999999999999999999999999999999999999999999988888764 4889999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeCChHHHH
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKGAPERIL 160 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il 160 (492)
+++|||+|++++|+++..+..+++|+|+++|+++++|+|+++|++|||||||||+|+|++.+..... .-..++++
T Consensus 236 vvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~-----~~~~~~~l 310 (562)
T TIGR01511 236 IIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFG-----DRDRTELL 310 (562)
T ss_pred HHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCC-----CCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998742111 11356678
Q ss_pred HhccccccCCeeccCCHHHHHHHHHH---------HHHHhhcCceEEEe-eeeccCCCCCCC-------CCccCCCCCCC
Q psy11923 161 DKCSTIFINGKEKVLDEEMREAFNNA---------YYELGGLGERVLGF-CDLLLPADKFPL-------GFKFDCDEPNF 223 (492)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~G~r~l~~-a~~~l~~~~~~~-------~~~~~~~~~~~ 223 (492)
..++..+ +.++||+++++.++.++. .++..++|++...- ....++...+.+ .....+....+
T Consensus 311 ~~aa~~e-~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~~~~~~~~g~~~~~ 389 (562)
T TIGR01511 311 ALAAALE-AGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIKIDGKAEQGSTSVL 389 (562)
T ss_pred HHHHHHh-ccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCCCChhhhCCCEEEE
Confidence 7776655 778999999998876532 23344555543211 111222221110 11122334556
Q ss_pred CCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 224 PLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 224 ~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+..|++++|.+.++|++|||++++|++||+.|++++|+|||++.++..+++++|++ .+.+..|++|. ..+.++++
T Consensus 390 ~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----~~~~~~p~~K~-~~v~~l~~ 464 (562)
T TIGR01511 390 VAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----VRAEVLPDDKA-ALIKELQE 464 (562)
T ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc----EEccCChHHHH-HHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999996 67788888883 44444443
Q ss_pred hhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhH
Q psy11923 304 RAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASI 383 (492)
Q Consensus 304 ~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l 383 (492)
+ ++++.|+|| |.||.++++.|++| ++|| .|++.++++||++++++++..+
T Consensus 465 ~-----------~~~v~~VGD-----------------g~nD~~al~~A~vg-ia~g-~g~~~a~~~Advvl~~~~l~~l 514 (562)
T TIGR01511 465 K-----------GRVVAMVGD-----------------GINDAPALAQADVG-IAIG-AGTDVAIEAADVVLMRNDLNDV 514 (562)
T ss_pred c-----------CCEEEEEeC-----------------CCccHHHHhhCCEE-EEeC-CcCHHHHhhCCEEEeCCCHHHH
Confidence 1 356776665 48999999999999 9999 8999999999999999999999
Q ss_pred HhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHH
Q psy11923 384 VTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFL 416 (492)
Q Consensus 384 ~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~ 416 (492)
++++++||+++++|+||+.|++.||++.+.+.+
T Consensus 515 ~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 515 ATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997664443
No 22
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1e-56 Score=507.31 Aligned_cols=423 Identities=19% Similarity=0.171 Sum_probs=314.8
Q ss_pred eeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cH---------
Q psy11923 4 STAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGY-----HW--------- 69 (492)
Q Consensus 4 G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------- 69 (492)
|+++|+|++||.+| |+.++....+.+++++++.++++..+++.+.++++++.++...++.. .|
T Consensus 214 ~~~~gvVvyTG~~T---k~~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~ 290 (1057)
T TIGR01652 214 DWVIGVVVYTGHDT---KLMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSER 290 (1057)
T ss_pred CeEEEEEEEEchhh---hhhhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccc
Confidence 89999999999999 55566777778899999999999999888888777777665433221 12
Q ss_pred ------HHHHHHHHHHHHHhcCchhHHHHHHHHHHHH------HHHhcC----CceecchhHHHhhcCccEEEcCCCCcc
Q psy11923 70 ------LDAVIFLIGIIVANVPEGLLATVTVCLTLTA------KRMASK----NCLVKNLEAVETLGSTSTICSDKTGTL 133 (492)
Q Consensus 70 ------~~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~------~~~~k~----gilvk~~~~le~lg~v~~i~~DKTGTL 133 (492)
...+..++.++..++|.+|+.++.++...++ .+|.++ ++++|+.+.+|+||++++||+||||||
T Consensus 291 ~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTL 370 (1057)
T TIGR01652 291 NAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTL 370 (1057)
T ss_pred cchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCce
Confidence 2367788889999999999999999999998 778764 599999999999999999999999999
Q ss_pred CCCceEEEcCC---------------------------------------------------------------------
Q psy11923 134 TQNRMTTEDPN--------------------------------------------------------------------- 144 (492)
Q Consensus 134 T~~~~~v~~~~--------------------------------------------------------------------- 144 (492)
|+|+|++....
T Consensus 371 T~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC 450 (1057)
T TIGR01652 371 TQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALC 450 (1057)
T ss_pred eeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhc
Confidence 99988873110
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 145 -------------------------------------------------------------------------------- 144 (492)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (492)
T Consensus 451 ~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~ 530 (1057)
T TIGR01652 451 HTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRN 530 (1057)
T ss_pred CcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEe
Confidence
Q ss_pred -CCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCc--------
Q psy11923 145 -DPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFK-------- 215 (492)
Q Consensus 145 -~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~-------- 215 (492)
++++.+++|||||.++++|.. ..+..++.+.+.+++++.+|+|++++|++.++++++.+..+
T Consensus 531 ~~~~~~l~~KGA~e~il~~~~~---------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~ 601 (1057)
T TIGR01652 531 PDGRIKLLCKGADTVIFKRLSS---------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTA 601 (1057)
T ss_pred CCCeEEEEEeCcHHHHHHHhhc---------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhh
Confidence 001234566666666666642 11234566777899999999999999999988764321100
Q ss_pred cC------CCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccccccccc---c
Q psy11923 216 FD------CDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQY---D 286 (492)
Q Consensus 216 ~~------~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~---~ 286 (492)
.. .+..+.+|+|++++|+++++||+|||++++|+.||++||++||+|||+++||.+||++||+...+... .
T Consensus 602 ~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~ 681 (1057)
T TIGR01652 602 LTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVIT 681 (1057)
T ss_pred hhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 00 00113467899999999999999999999999999999999999999999999999999987543211 0
Q ss_pred cCChhH----------------------------------------------HHHHHHHhhhhhhcccCCCchhhcceee
Q psy11923 287 RTSPGF----------------------------------------------KALARIATLCNRAEFKGGQDGAIAKSVG 320 (492)
Q Consensus 287 ~~~~~~----------------------------------------------k~~~~~~~~~~~~~~~~~~~~~~~~~v~ 320 (492)
....++ +.+..+...++...+++..+.+.++-|.
T Consensus 682 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~ 761 (1057)
T TIGR01652 682 SESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVR 761 (1057)
T ss_pred cCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHH
Confidence 100000 0011111111111222222222222221
Q ss_pred eecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchH--HHHHhhchhccCCCchhHHhHH-HhhhhHHHHH
Q psy11923 321 IISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSD--VSKQAADMILLDDNFASIVTGV-EEGRLIFDNL 397 (492)
Q Consensus 321 ~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~--~a~~aADivl~~~~l~~l~~~i-~~gR~~~~~i 397 (492)
.+... ..+.+.|+|||+||++|++.||+| |++ +|+| .|+.+||+++.+ |+++.+++ .|||++|+|+
T Consensus 762 ~lk~~------~~~~vl~iGDG~ND~~mlk~AdVG-Igi--~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~ 830 (1057)
T TIGR01652 762 LVKKS------TGKTTLAIGDGANDVSMIQEADVG-VGI--SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRI 830 (1057)
T ss_pred HHHhc------CCCeEEEEeCCCccHHHHhhcCee-eEe--cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHH
Confidence 11100 001245789999999999999999 755 6777 488899999976 99999998 6999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHhcCC---CChHHHHHHHHHHhhhhcccCcCCC
Q psy11923 398 KKSIAYTLTSNIPEISPFLTFILLDIP---LPLGTVTILCIDLGTDMELTWQGKT 449 (492)
Q Consensus 398 ~~~~~~~~~~ni~~~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~l~~ 449 (492)
++.+.|.++.|+..+++.+++.++..+ .++.+++++|+|++++++|+++++.
T Consensus 831 ~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~ 885 (1057)
T TIGR01652 831 SKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGV 885 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999998888776544 3688899999999999999998753
No 23
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4.1e-56 Score=492.58 Aligned_cols=375 Identities=20% Similarity=0.283 Sum_probs=310.4
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--HHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYH--WLDAVIFLIG 78 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~ 78 (492)
+.+|.++++|+++|++|.++||.+++++++..|+|+|+.+|+++.+++|++++++++.+++|++.+.. |..++.++++
T Consensus 394 ~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~ 473 (834)
T PRK10671 394 VQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATT 473 (834)
T ss_pred ecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999998876543 6678899999
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeC-ChH
Q psy11923 79 IIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKG-APE 157 (492)
Q Consensus 79 vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kG-a~e 157 (492)
+++++|||+|++++|+++..++.+++|+|+|+|+++++|+++++|++|||||||||+|+|+|.+... ..| ..+
T Consensus 474 vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~------~~~~~~~ 547 (834)
T PRK10671 474 VLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKT------FNGVDEA 547 (834)
T ss_pred HHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEc------cCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999976421 122 345
Q ss_pred HHHHhccccccCCeeccCCHHHHHHHHH-------HHHHHhhcCceEEE-eeeeccCCCCCCC--------------CCc
Q psy11923 158 RILDKCSTIFINGKEKVLDEEMREAFNN-------AYYELGGLGERVLG-FCDLLLPADKFPL--------------GFK 215 (492)
Q Consensus 158 ~il~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~G~r~l~-~a~~~l~~~~~~~--------------~~~ 215 (492)
+++..+...+ .++.||+++++.+...+ .+++..+.|.+... .....+++.++.. ..+
T Consensus 548 ~~l~~a~~~e-~~s~hp~a~Ai~~~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 626 (834)
T PRK10671 548 QALRLAAALE-QGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQA 626 (834)
T ss_pred HHHHHHHHHh-CCCCCHHHHHHHHHHhhCCCCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHH
Confidence 6677666555 78899999998776542 23334455554321 0111112211110 001
Q ss_pred cCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHH
Q psy11923 216 FDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKAL 295 (492)
Q Consensus 216 ~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~ 295 (492)
..+....++..|++++|.+.++|++|||++++|++|++.|++++|+|||++.+|.++++++|+++ .+.+..|++|.
T Consensus 627 ~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---~~~~~~p~~K~- 702 (834)
T PRK10671 627 SQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE---VIAGVLPDGKA- 702 (834)
T ss_pred hCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---EEeCCCHHHHH-
Confidence 12334566778999999999999999999999999999999999999999999999999999975 77788899884
Q ss_pred HHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhc
Q psy11923 296 ARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMIL 375 (492)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl 375 (492)
+.+++++++ ++.+.|+|| |+||.++++.|++| ++|| +|++.++++||+++
T Consensus 703 ~~i~~l~~~-----------~~~v~~vGD-----------------g~nD~~al~~Agvg-ia~g-~g~~~a~~~ad~vl 752 (834)
T PRK10671 703 EAIKRLQSQ-----------GRQVAMVGD-----------------GINDAPALAQADVG-IAMG-GGSDVAIETAAITL 752 (834)
T ss_pred HHHHHHhhc-----------CCEEEEEeC-----------------CHHHHHHHHhCCee-EEec-CCCHHHHHhCCEEE
Confidence 455554422 455776665 58999999999999 9999 99999999999999
Q ss_pred cCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHH
Q psy11923 376 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFL 416 (492)
Q Consensus 376 ~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~ 416 (492)
+++++..+++++++||+++++|+||+.|++.||++.+.+.+
T Consensus 753 ~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 753 MRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997765443
No 24
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1e-55 Score=495.15 Aligned_cols=452 Identities=19% Similarity=0.158 Sum_probs=334.8
Q ss_pred eeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC-------------
Q psy11923 4 STAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFAL---GY------------- 67 (492)
Q Consensus 4 G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------- 67 (492)
.+++|+|++||.|| |++.+-..++.+++++++.+|++..+++.+.+++|++..+....+ ..
T Consensus 296 ~~i~GvVVYTG~dT---K~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~ 372 (1178)
T PLN03190 296 AWAIGVAVYCGRET---KAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKD 372 (1178)
T ss_pred ceEEEEEEEechhh---hHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence 48999999999999 788887777889999999999999998888888877765553221 00
Q ss_pred ------------cH----HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCC----------ceecchhHHHhhcC
Q psy11923 68 ------------HW----LDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKN----------CLVKNLEAVETLGS 121 (492)
Q Consensus 68 ------------~~----~~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~g----------ilvk~~~~le~lg~ 121 (492)
.| ...+..++.++...+|.+|++++.++....+..+.++. +.+|+.+.+|+||+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGq 452 (1178)
T PLN03190 373 FSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQ 452 (1178)
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhcc
Confidence 00 12233345566689999999999999988676776544 78999999999999
Q ss_pred ccEEEcCCCCccCCCceEEEc-----------------------------------------------------------
Q psy11923 122 TSTICSDKTGTLTQNRMTTED----------------------------------------------------------- 142 (492)
Q Consensus 122 v~~i~~DKTGTLT~~~~~v~~----------------------------------------------------------- 142 (492)
|++||+|||||||+|+|++..
T Consensus 453 V~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 532 (1178)
T PLN03190 453 IKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHV 532 (1178)
T ss_pred ceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHH
Confidence 999999999999999987710
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 143 -------------------------------------------------------------------------------- 142 (492)
Q Consensus 143 -------------------------------------------------------------------------------- 142 (492)
T Consensus 533 ~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~ 612 (1178)
T PLN03190 533 HDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFD 612 (1178)
T ss_pred HHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEeccc
Confidence
Q ss_pred -----------CCCCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCC
Q psy11923 143 -----------PNDPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFP 211 (492)
Q Consensus 143 -----------~~~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~ 211 (492)
..+++..+++|||||.|+++|.... .+..++.+.+.+++++.+|+|+|++|++.++++++.
T Consensus 613 S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~ 684 (1178)
T PLN03190 613 SDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL--------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFE 684 (1178)
T ss_pred ccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc--------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHh
Confidence 0012345678888888888885321 223456677889999999999999999999876543
Q ss_pred CCCc--------------cCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcc
Q psy11923 212 LGFK--------------FDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTT 277 (492)
Q Consensus 212 ~~~~--------------~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~g 277 (492)
++.. ...+..+.+|.|++++|+++++|++|++++++|+.|+++|+++||+|||+++||.+||++||
T Consensus 685 ~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~ 764 (1178)
T PLN03190 685 QWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSK 764 (1178)
T ss_pred hHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhC
Confidence 2110 00111234789999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc---cCChh------------------------------------------------------HHHHHHHHh
Q psy11923 278 EDQSGVQYD---RTSPG------------------------------------------------------FKALARIAT 300 (492)
Q Consensus 278 i~~~~~~~~---~~~~~------------------------------------------------------~k~~~~~~~ 300 (492)
+...+...- .-.++ .+.+..+..
T Consensus 765 Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~ 844 (1178)
T PLN03190 765 LLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLAS 844 (1178)
T ss_pred CCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHH
Confidence 865442110 00000 011112222
Q ss_pred hhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchH--HHHHhhchhccCC
Q psy11923 301 LCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSD--VSKQAADMILLDD 378 (492)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~--~a~~aADivl~~~ 378 (492)
.|+...+++.++.+.++.|.++.... ...+.++|||+||++++++||+| | |++|+| .|..+||+++.+
T Consensus 845 ~~~~VI~cR~sP~QKa~IV~~vk~~~------~~vtlaIGDGaNDv~mIq~AdVG-I--GIsG~EG~qA~~aSDfaI~~- 914 (1178)
T PLN03190 845 KCSVVLCCRVAPLQKAGIVALVKNRT------SDMTLAIGDGANDVSMIQMADVG-V--GISGQEGRQAVMASDFAMGQ- 914 (1178)
T ss_pred hCCEEEEecCCHHHHHHHHHHHHhcC------CcEEEEECCCcchHHHHHhcCee-e--eecCchhHHHHHhhccchhh-
Confidence 22222233333333333222221100 01134679999999999999998 6 557887 577799999977
Q ss_pred CchhHHhHHH-hhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCC---hHHHHHHHHHHhhhhcccCcCC------
Q psy11923 379 NFASIVTGVE-EGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLP---LGTVTILCIDLGTDMELTWQGK------ 448 (492)
Q Consensus 379 ~l~~l~~~i~-~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~~~~~~l~------ 448 (492)
|+.|.+++. |||+.|+|+.+.+.|.|++|++.+++.+++.++..+++ +..+.+.++|++++++|.+..+
T Consensus 915 -Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv 993 (1178)
T PLN03190 915 -FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDL 993 (1178)
T ss_pred -hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccC
Confidence 999999999 99999999999999999999999999999988877654 6788899999999999998842
Q ss_pred ---------------CCCCCccchheeeeeccccccceeeeeee
Q psy11923 449 ---------------THIPEISPFLTFILLDIPLPLGTVTILCI 477 (492)
Q Consensus 449 ---------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (492)
.+.+.++.+.++.|+..+.++|.++||+.
T Consensus 994 ~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~ 1037 (1178)
T PLN03190 994 SRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVP 1037 (1178)
T ss_pred CHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233456666777777888888777654
No 25
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=6.2e-55 Score=460.66 Aligned_cols=371 Identities=21% Similarity=0.264 Sum_probs=307.9
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
+++|+++++|+++|.+|.+|||.+++++++.+++|+++.+++++.+++++++.++++.+++|++... +..++.++++++
T Consensus 126 v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~svl 204 (536)
T TIGR01512 126 NLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR-WPFWVYRALVLL 204 (536)
T ss_pred ECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999988888876543 334888999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeCChHHHH
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKGAPERIL 160 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il 160 (492)
+++|||+|++++|+++..+.++++|+|+++|+++++|+++++|++|||||||||+|+|+|.+.. +.+++
T Consensus 205 v~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~-----------~~~~l 273 (536)
T TIGR01512 205 VVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV-----------PAEVL 273 (536)
T ss_pred hhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee-----------HHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997642 23567
Q ss_pred HhccccccCCeeccCCHHHHHHHHH-----HHHHHhhcCceEEE-eeeeccCCCCCCC-----CCccCCCCCCCCCCCcE
Q psy11923 161 DKCSTIFINGKEKVLDEEMREAFNN-----AYYELGGLGERVLG-FCDLLLPADKFPL-----GFKFDCDEPNFPLTGMR 229 (492)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~G~r~l~-~a~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~ 229 (492)
+.+...+ +.+.||++.++.++..+ ..++++++|++... .....++..++.+ .....+....+++.|++
T Consensus 274 ~~a~~~e-~~~~hp~~~Ai~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 352 (536)
T TIGR01512 274 RLAAAAE-QASSHPLARAIVDYARKRENVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGARPESAGKTIVHVARDGT 352 (536)
T ss_pred HHHHHHh-ccCCCcHHHHHHHHHHhcCCCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCcchhhCCCeEEEEEECCE
Confidence 7766443 78899999999877653 23344555654321 1112223222211 11112234456778999
Q ss_pred EEEEEeeeCCCCCChHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhccc
Q psy11923 230 FVGLMSMIDPPRAAVPDAVAKCRSAGI-KVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFK 308 (492)
Q Consensus 230 ~~G~i~l~D~lr~~a~~~I~~L~~~Gi-~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 308 (492)
+.|.+.++|++|||++++|++|+++|+ +++|+|||++.+|..+++++|+++ .+.+..|++|. ..+.++++.
T Consensus 353 ~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---~f~~~~p~~K~-~~i~~l~~~---- 424 (536)
T TIGR01512 353 YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---VHAELLPEDKL-EIVKELREK---- 424 (536)
T ss_pred EEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---hhhccCcHHHH-HHHHHHHhc----
Confidence 999999999999999999999999999 999999999999999999999976 67788888873 444444422
Q ss_pred CCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 309 GGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 309 ~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
++++.|+|| |.||.++++.|++| +++|.+|++.++++||+++++++++.+++++.
T Consensus 425 -------~~~v~~vGD-----------------g~nD~~al~~A~vg-ia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 425 -------YGPVAMVGD-----------------GINDAPALAAADVG-IAMGASGSDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred -------CCEEEEEeC-----------------CHHHHHHHHhCCEE-EEeCCCccHHHHHhCCEEEECCCHHHHHHHHH
Confidence 356666665 58999999999998 99996689999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy11923 389 EGRLIFDNLKKSIAYTLTSNIPEISPFLT 417 (492)
Q Consensus 389 ~gR~~~~~i~~~~~~~~~~ni~~~~~~~~ 417 (492)
+||++++++++|+.|++.||++.+.+.++
T Consensus 480 ~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 480 LARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999977665553
No 26
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2e-54 Score=459.49 Aligned_cols=378 Identities=23% Similarity=0.287 Sum_probs=310.0
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
+++|+++++|+++|.+|++|||.+++++++.+++|+++.+++++.++++++++++++.++.|+..+.. .++.++++++
T Consensus 127 v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~--~~~~~~~~vl 204 (556)
T TIGR01525 127 NGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGAL--GALYRALAVL 204 (556)
T ss_pred ECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999988766544 8899999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeCChHHHH
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKGAPERIL 160 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il 160 (492)
+++|||+|++++|+++..+.++++|+|+++|+++++|+++++|++|||||||||+|+|+|.+....... ..++++++
T Consensus 205 v~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~---~~~~~~~l 281 (556)
T TIGR01525 205 VVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA---SISEEELL 281 (556)
T ss_pred hhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC---CccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999764211000 01257788
Q ss_pred HhccccccCCeeccCCHHHHHHHHHH---------HHHHhhcCceEEEee--eeccCCCCCC-----C---------CCc
Q psy11923 161 DKCSTIFINGKEKVLDEEMREAFNNA---------YYELGGLGERVLGFC--DLLLPADKFP-----L---------GFK 215 (492)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~G~r~l~~a--~~~l~~~~~~-----~---------~~~ 215 (492)
+.|...+ +.+.||++.++.+...+. .++..+.|++...-. ...++..++. . ...
T Consensus 282 ~~a~~~e-~~~~hp~~~Ai~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 360 (556)
T TIGR01525 282 ALAAALE-QSSSHPLARAIVRYAKKRGLELPKQEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEGE 360 (556)
T ss_pred HHHHHHh-ccCCChHHHHHHHHHHhcCCCcccccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHHh
Confidence 8776655 678899999998876532 123345554432111 2222222211 0 001
Q ss_pred cCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHH
Q psy11923 216 FDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAG-IKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKA 294 (492)
Q Consensus 216 ~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~G-i~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~ 294 (492)
..+....++..|++++|.+.++|++|||++++|++|+++| ++++|+|||+..++.++++++|+++ .|.+..|++|.
T Consensus 361 ~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---~f~~~~p~~K~ 437 (556)
T TIGR01525 361 SQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---VHAELLPEDKL 437 (556)
T ss_pred hCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---eeccCCHHHHH
Confidence 1233445677899999999999999999999999999999 9999999999999999999999975 67788888884
Q ss_pred HHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchh
Q psy11923 295 LARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMI 374 (492)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADiv 374 (492)
..+.++++. ++++.|+|| |.||.++++.|++| +++| ++++.+++.||++
T Consensus 438 -~~v~~l~~~-----------~~~v~~vGD-----------------g~nD~~al~~A~vg-ia~g-~~~~~~~~~Ad~v 486 (556)
T TIGR01525 438 -AIVKELQEE-----------GGVVAMVGD-----------------GINDAPALAAADVG-IAMG-AGSDVAIEAADIV 486 (556)
T ss_pred -HHHHHHHHc-----------CCEEEEEEC-----------------ChhHHHHHhhCCEe-EEeC-CCCHHHHHhCCEE
Confidence 344444421 346676665 48999999999999 9999 8999999999999
Q ss_pred ccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11923 375 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTF 418 (492)
Q Consensus 375 l~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~ 418 (492)
+.+++++.+++++++||+++++|++|+.|++.||++.+.+.+.+
T Consensus 487 i~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 487 LLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999876555433
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.7e-52 Score=440.62 Aligned_cols=333 Identities=31% Similarity=0.448 Sum_probs=283.2
Q ss_pred cceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC---cHHHHHHHHH
Q psy11923 2 VTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFI-HIITGVAVFLGVSFFIIAFALGY---HWLDAVIFLI 77 (492)
Q Consensus 2 ~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i 77 (492)
.+|..++.|+++|.+|..+++...+.+++..++++++..+++. .+++++++.++++.++.|+.... +|..++.+++
T Consensus 106 ~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (499)
T TIGR01494 106 FNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRAL 185 (499)
T ss_pred eccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 5799999999999999999999999998888999999999999 78888888888888888866543 3888999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCC-----------
Q psy11923 78 GIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDP----------- 146 (492)
Q Consensus 78 ~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~----------- 146 (492)
++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++|||||||||+|+|++.+....
T Consensus 186 ~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~s~hp~~ 265 (499)
T TIGR01494 186 ILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGGEYLSGHPDE 265 (499)
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCCCcCCCChHH
Confidence 999999999999999999999999999999999999999999999999999999999999998432100
Q ss_pred ------------------------------ceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCce
Q psy11923 147 ------------------------------RHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGER 196 (492)
Q Consensus 147 ------------------------------~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r 196 (492)
....+.||+++.+.++|.. +.+..+++..+|+|
T Consensus 266 ~ai~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~-----------------~~~~~~~~~~~g~~ 328 (499)
T TIGR01494 266 RALVKSAKWKILNVFEFSSVRKRMSVIVRGPDGTYVKGAPEFVLSRVKD-----------------LEEKVKELAQSGLR 328 (499)
T ss_pred HHHHHHhhhcCcceeccCCCCceEEEEEecCCcEEEeCCHHHHHHhhHH-----------------HHHHHHHHHhCCCE
Confidence 0012445555555554421 12233456678889
Q ss_pred EEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhc
Q psy11923 197 VLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADT 276 (492)
Q Consensus 197 ~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~ 276 (492)
++.++++ .+++|++.++|++|++++++|+.|+++|++++|+|||++.+|.++|+++
T Consensus 329 ~~~~a~~------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 329 VLAVASK------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred EEEEEEC------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 8887742 3799999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeee
Q psy11923 277 TEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGS 356 (492)
Q Consensus 277 gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ 356 (492)
|+ +.+++|++|. ..+..+++ .++.+.|+|| |+||.||++.||+|
T Consensus 385 gi------~~~~~p~~K~-~~v~~l~~-----------~g~~v~~vGD-----------------g~nD~~al~~Advg- 428 (499)
T TIGR01494 385 GI------FARVTPEEKA-ALVEALQK-----------KGRVVAMTGD-----------------GVNDAPALKKADVG- 428 (499)
T ss_pred Cc------eeccCHHHHH-HHHHHHHH-----------CCCEEEEECC-----------------ChhhHHHHHhCCCc-
Confidence 97 6789999995 44444442 2456777665 48999999999999
Q ss_pred eeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy11923 357 VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLT 417 (492)
Q Consensus 357 ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~ 417 (492)
|+|| |+++||++|+++++..++.++++||++++++++|+.|++.||+..+.+.++
T Consensus 429 ia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 429 IAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred cccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9996 688999999999999999999999999999999999999999986665554
No 28
>KOG0208|consensus
Probab=100.00 E-value=7e-52 Score=430.53 Aligned_cols=428 Identities=18% Similarity=0.239 Sum_probs=331.5
Q ss_pred cceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q psy11923 2 VTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGIIV 81 (492)
Q Consensus 2 ~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv 81 (492)
.+|.+.++|++||.+|..|++.+.+-.++....++-|..-+|...++.++++..+...+.....+.+....+.+++.++.
T Consensus 348 ~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliT 427 (1140)
T KOG0208|consen 348 LGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLIT 427 (1140)
T ss_pred CCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEE
Confidence 35789999999999999999999999988888888888888888887777776666666666778888999999999999
Q ss_pred HhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEE---------------------
Q psy11923 82 ANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTT--------------------- 140 (492)
Q Consensus 82 ~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v--------------------- 140 (492)
+.+|+|||.+.+++...+.+|+.|+||+|-++..+...|++|++|||||||||++.+.+
T Consensus 428 i~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~ 507 (1140)
T KOG0208|consen 428 IVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTE 507 (1140)
T ss_pred EecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999998887
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 141 -------------------------------------------------------------------------------- 140 (492)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (492)
T Consensus 508 ~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~ 587 (1140)
T KOG0208|consen 508 DSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPE 587 (1140)
T ss_pred hhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCc
Confidence
Q ss_pred ---------------------------------EcCCCCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHH
Q psy11923 141 ---------------------------------EDPNDPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAY 187 (492)
Q Consensus 141 ---------------------------------~~~~~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~ 187 (492)
....+++..+|+||+||.|.+.|.. +.+++++++.+
T Consensus 588 ~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-----------~tvP~dy~evl 656 (1140)
T KOG0208|consen 588 NAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-----------ETVPADYQEVL 656 (1140)
T ss_pred ccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-----------ccCCccHHHHH
Confidence 1123467789999999999999963 45667788899
Q ss_pred HHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHH
Q psy11923 188 YELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPI 267 (492)
Q Consensus 188 ~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~ 267 (492)
++++.+|+|++++|+|.++...+.+..+.. .+.+|.|++++|++.+|+++|++++.+|++|.+++||++|+||||..
T Consensus 657 ~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~---Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNll 733 (1140)
T KOG0208|consen 657 KEYTHQGFRVIALASKELETSTLQKAQKLS---RDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLL 733 (1140)
T ss_pred HHHHhCCeEEEEEecCccCcchHHHHhhcc---HhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchh
Confidence 999999999999999999877544333333 34478999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccc--ccccC----------------------------Chh---HH-HHHHHHhhhhhhcccCCCc-
Q psy11923 268 TAKIIEADTTEDQSGV--QYDRT----------------------------SPG---FK-ALARIATLCNRAEFKGGQD- 312 (492)
Q Consensus 268 tA~~ia~~~gi~~~~~--~~~~~----------------------------~~~---~k-~~~~~~~~~~~~~~~~~~~- 312 (492)
||..+||+||+..... .+-+. .|+ .+ ..+......-...+.+...
T Consensus 734 TaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~ 813 (1140)
T KOG0208|consen 734 TAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQ 813 (1140)
T ss_pred eeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhH
Confidence 9999999999753321 00000 000 00 0000000000000111000
Q ss_pred ------hhhccee----eeecC-CcccH----HHHHH---hcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchh
Q psy11923 313 ------GAIAKSV----GIISE-GNETV----EDIAL---RLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMI 374 (492)
Q Consensus 313 ------~~~~~~v----~~~gd-~~~~~----~~~~~---~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADiv 374 (492)
...-+++ .+... .+.++ .++++ .+||||||.||+.||++||+| |+++ -. .|.-||.++
T Consensus 814 ~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvG-ISLS--ea-EASvAApFT 889 (1140)
T KOG0208|consen 814 VILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVG-ISLS--EA-EASVAAPFT 889 (1140)
T ss_pred HHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccC-cchh--hh-hHhhcCccc
Confidence 0000111 11111 11122 22222 357899999999999999999 9985 33 355599999
Q ss_pred ccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCcCCC
Q psy11923 375 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQGKT 449 (492)
Q Consensus 375 l~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~ 449 (492)
..-.+++.++++|++||+..-.-...++|...|.+++++..++... .-..++..|+++++++...+.+++++.
T Consensus 890 Sk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~--~~~nl~D~Qfl~iDLlii~pia~~m~~ 962 (1140)
T KOG0208|consen 890 SKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYL--INSNLGDLQFLFIDLLIITPIAVMMSR 962 (1140)
T ss_pred cCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeee--ecccccchhhhhhHHHHHHHHHHHHcc
Confidence 9888999999999999999999999999999999988765554333 347899999999999988877777443
No 29
>KOG0206|consensus
Probab=100.00 E-value=3.6e-50 Score=436.63 Aligned_cols=451 Identities=18% Similarity=0.129 Sum_probs=350.2
Q ss_pred eeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------------
Q psy11923 4 STAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGY---------------- 67 (492)
Q Consensus 4 G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 67 (492)
-+++|+|+.+|.+| |++++...++.++++++|.+++....++.+.+.++++..+...++..
T Consensus 243 ~~v~G~vv~tG~dt---K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 319 (1151)
T KOG0206|consen 243 EWVYGVVVFTGHDT---KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE 319 (1151)
T ss_pred cEEEEEEEEcCCcc---hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch
Confidence 46899999999999 88888888999999999999999999888888887776655433211
Q ss_pred ---cHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHh----------cCCceecchhHHHhhcCccEEEcCCCCccC
Q psy11923 68 ---HWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA----------SKNCLVKNLEAVETLGSTSTICSDKTGTLT 134 (492)
Q Consensus 68 ---~~~~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~----------k~gilvk~~~~le~lg~v~~i~~DKTGTLT 134 (492)
.....+..++.++...+|.+|..++.+.....+.-.. .....+|+.+..|+||+|++|++|||||||
T Consensus 320 ~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT 399 (1151)
T KOG0206|consen 320 AAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLT 399 (1151)
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccc
Confidence 1133456666778889999999999988877764322 467899999999999999999999999999
Q ss_pred CCceEE--------------------------------------------------------------------------
Q psy11923 135 QNRMTT-------------------------------------------------------------------------- 140 (492)
Q Consensus 135 ~~~~~v-------------------------------------------------------------------------- 140 (492)
+|.|++
T Consensus 400 ~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e 479 (1151)
T KOG0206|consen 400 QNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPE 479 (1151)
T ss_pred cceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeec
Confidence 999887
Q ss_pred --------------------------------------------------------------------EcCCCCceEEEE
Q psy11923 141 --------------------------------------------------------------------EDPNDPRHLEVM 152 (492)
Q Consensus 141 --------------------------------------------------------------------~~~~~~~~~~~~ 152 (492)
++.++++..+++
T Consensus 480 ~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~Lyc 559 (1151)
T KOG0206|consen 480 KDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYC 559 (1151)
T ss_pred cCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEE
Confidence 234567899999
Q ss_pred eCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCc--------------cCC
Q psy11923 153 KGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFK--------------FDC 218 (492)
Q Consensus 153 kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~--------------~~~ 218 (492)
|||+..|++|++. -.+...+...+++++++.+|+|+|++|++++.+++|.++.+ ...
T Consensus 560 KGADsvI~erL~~---------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~ 630 (1151)
T KOG0206|consen 560 KGADSVIFERLSK---------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLD 630 (1151)
T ss_pred cCcchhhHhhhhh---------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHH
Confidence 9999999999874 23456777788999999999999999999999887754321 111
Q ss_pred CCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccc---ccc--------
Q psy11923 219 DEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQ---YDR-------- 287 (492)
Q Consensus 219 ~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~---~~~-------- 287 (492)
+.++.+|+|++++|.+++||++++|++|+|+.|++||||+||||||+.|||.+|+..|++...+.. ...
T Consensus 631 e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~ 710 (1151)
T KOG0206|consen 631 EVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSS 710 (1151)
T ss_pred HHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcc
Confidence 235668899999999999999999999999999999999999999999999999999976533221 000
Q ss_pred -------------------------------------------CCh-hHHHHHHHHhhhhhhcccCCCchhhcceeeeec
Q psy11923 288 -------------------------------------------TSP-GFKALARIATLCNRAEFKGGQDGAIAKSVGIIS 323 (492)
Q Consensus 288 -------------------------------------------~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 323 (492)
+.+ +.+.+-.....|+...||+..+.+.+..|.++.
T Consensus 711 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk 790 (1151)
T KOG0206|consen 711 LDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVK 790 (1151)
T ss_pred hhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHH
Confidence 111 122344455555666666666655555444442
Q ss_pred CCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchH--HHHHhhchhccCCCchhHHhHHH-hhhhHHHHHHHH
Q psy11923 324 EGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSD--VSKQAADMILLDDNFASIVTGVE-EGRLIFDNLKKS 400 (492)
Q Consensus 324 d~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~--~a~~aADivl~~~~l~~l~~~i~-~gR~~~~~i~~~ 400 (492)
.+.+. ..--+|||.||.+.+..||+| |++ +|.| .|..+||+.+.+ |+.+.+++. |||+.|.|+.+.
T Consensus 791 ~~~~~------~TLAIGDGANDVsMIQ~AhVG-VGI--sG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ 859 (1151)
T KOG0206|consen 791 KGLKA------VTLAIGDGANDVSMIQEAHVG-VGI--SGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKM 859 (1151)
T ss_pred hcCCc------eEEEeeCCCccchheeeCCcC-eee--ccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHH
Confidence 11100 011359999999999999988 665 4544 355699999988 999999998 999999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHHhcCC---CChHHHHHHHHHHhhhhcccCcCCCCCCC---------------------ccc
Q psy11923 401 IAYTLTSNIPEISPFLTFILLDIP---LPLGTVTILCIDLGTDMELTWQGKTHIPE---------------------ISP 456 (492)
Q Consensus 401 ~~~~~~~ni~~~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~l~~~~p~---------------------~~~ 456 (492)
+.|+|++|+......+++.++..+ ..+.++++.++|++++++|.++++..+.+ .++
T Consensus 860 ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~ 939 (1151)
T KOG0206|consen 860 ILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNW 939 (1151)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccch
Confidence 999999999999999999888766 45788999999999999999986543322 234
Q ss_pred hheeeeeccccccceeeeeee
Q psy11923 457 FLTFILLDIPLPLGTVTILCI 477 (492)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~ 477 (492)
..++.++..+++.+.++||+.
T Consensus 940 ~~f~~~~~~g~~~sli~Ff~~ 960 (1151)
T KOG0206|consen 940 KRFWGWMLDGFYQSLVIFFLP 960 (1151)
T ss_pred HHHHHHHHHHHHhheeeeeee
Confidence 444556667777777777666
No 30
>KOG0205|consensus
Probab=100.00 E-value=2.1e-48 Score=388.18 Aligned_cols=430 Identities=22% Similarity=0.323 Sum_probs=321.1
Q ss_pred cceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q psy11923 2 VTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGIIV 81 (492)
Q Consensus 2 ~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv 81 (492)
.+|++.++|++||.+|..||-+.++.. .+..-.+++.++.+..++...+.+.-++.+++.+.............+.+++
T Consensus 207 KqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvll 285 (942)
T KOG0205|consen 207 KQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLL 285 (942)
T ss_pred ccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheee
Confidence 579999999999999999999999988 5667889999998888765544433333333333333333444444555555
Q ss_pred H-hcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEE--------------------
Q psy11923 82 A-NVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTT-------------------- 140 (492)
Q Consensus 82 ~-~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v-------------------- 140 (492)
+ .+|.+||..+++.++.++.+++++|.++|...++|.|+.+|++|+|||||||.|++.|
T Consensus 286 IGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~ 365 (942)
T KOG0205|consen 286 IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLT 365 (942)
T ss_pred ecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHH
Confidence 5 4999999999999999999999999999999999999999999999999999999988
Q ss_pred -------------------------------------------------EcCCCCceEEEEeCChHHHHHhccccccCCe
Q psy11923 141 -------------------------------------------------EDPNDPRHLEVMKGAPERILDKCSTIFINGK 171 (492)
Q Consensus 141 -------------------------------------------------~~~~~~~~~~~~kGa~e~il~~~~~~~~~~~ 171 (492)
....+++.....||+||.+++.|..
T Consensus 366 A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~------ 439 (942)
T KOG0205|consen 366 AARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE------ 439 (942)
T ss_pred HHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc------
Confidence 1124567777899999999999963
Q ss_pred eccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHH
Q psy11923 172 EKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKC 251 (492)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L 251 (492)
+|++ ++.+.+.+++++++|+|.|+++++.+++.... . -....+++|+.-+-||+|++..++|++-
T Consensus 440 ~~~i----~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~-----~------~g~pw~~~gllp~fdpprhdsa~tirra 504 (942)
T KOG0205|consen 440 DHDI----PERVHSIIDKFAERGLRSLAVARQEVPEKTKE-----S------PGGPWEFVGLLPLFDPPRHDSAETIRRA 504 (942)
T ss_pred cCcc----hHHHHHHHHHHHHhcchhhhhhhhcccccccc-----C------CCCCcccccccccCCCCccchHHHHHHH
Confidence 3444 45566677799999999999999887765321 1 1245789999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHhhcccc----cccc-----------------------ccccCChhHHHHHHHHhhhhh
Q psy11923 252 RSAGIKVIMVTGDHPITAKIIEADTTED----QSGV-----------------------QYDRTSPGFKALARIATLCNR 304 (492)
Q Consensus 252 ~~~Gi~v~mlTGD~~~tA~~ia~~~gi~----~~~~-----------------------~~~~~~~~~k~~~~~~~~~~~ 304 (492)
...|++|.|+|||....++..++.+|.- .++. -|+..-|++| .+.+..+|++
T Consensus 505 l~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehK-y~iV~~Lq~r 583 (942)
T KOG0205|consen 505 LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHK-YEIVKILQER 583 (942)
T ss_pred HhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHH-HHHHHHHhhc
Confidence 9999999999999998888888877632 1110 1333444444 2333333322
Q ss_pred hcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHH
Q psy11923 305 AEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIV 384 (492)
Q Consensus 305 ~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~ 384 (492)
++.+ +|+|||+||+||++.||+| |++. ..+|+|+.+||+|++.+.++.++
T Consensus 584 -----------~hi~-----------------gmtgdgvndapaLKkAdig-iava-~atdaar~asdiVltepglSviI 633 (942)
T KOG0205|consen 584 -----------KHIV-----------------GMTGDGVNDAPALKKADIG-IAVA-DATDAARSASDIVLTEPGLSVII 633 (942)
T ss_pred -----------Ccee-----------------cccCCCcccchhhcccccc-eeec-cchhhhcccccEEEcCCCchhhH
Confidence 2333 4667789999999999999 9998 99999999999999999999999
Q ss_pred hHHHhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHHHHHHHHHHhhhhcccCc-----CCCCCCCc----c
Q psy11923 385 TGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMELTWQ-----GKTHIPEI----S 455 (492)
Q Consensus 385 ~~i~~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-----l~~~~p~~----~ 455 (492)
+++..+|.+|+|++.+..|+++..+-.++ .+....+-+.+.+++...+++-++-|...... .+...|+. .
T Consensus 634 ~avltSraIfqrmknytiyavsitiriv~-gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ 712 (942)
T KOG0205|consen 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVF-GFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKE 712 (942)
T ss_pred HHHHHHHHHHHHHhhheeeeehhHHHHHH-HHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhh
Confidence 99999999999999999999888776442 22222222335566666666666655433221 11122221 0
Q ss_pred chheeeeeccccccceeeeeeeecCCCccc
Q psy11923 456 PFLTFILLDIPLPLGTVTILCIDLGTDMIG 485 (492)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (492)
-|.....++.++.+-++.|||+...|+++-
T Consensus 713 ifatgvVlgtyma~~tvif~w~~~~t~ff~ 742 (942)
T KOG0205|consen 713 IFATGVVLGTYMAIMTVIFFWAAYTTDFFP 742 (942)
T ss_pred hheeeeEehhHHHHHHHHHhhhhccccccc
Confidence 033344445555566889999988888765
No 31
>KOG0210|consensus
Probab=100.00 E-value=1.5e-44 Score=362.41 Aligned_cols=425 Identities=21% Similarity=0.230 Sum_probs=317.8
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
|.+|.++|+|+|||.|| |-+.+-..++.+-.-++..+|.+.+.++..++.++++...... ++..|...+.+++-++
T Consensus 286 vAs~t~~gvVvYTG~dt---RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g-~~~~wyi~~~RfllLF 361 (1051)
T KOG0210|consen 286 VASGTAIGVVVYTGRDT---RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG-FGSDWYIYIIRFLLLF 361 (1051)
T ss_pred EecCcEEEEEEEecccH---HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc-CCCchHHHHHHHHHHH
Confidence 45799999999999999 5566667777777888999999999999888888876654433 3578999999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhc----CCceecchhHHHhhcCccEEEcCCCCccCCCceEE----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMAS----KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTT---------------- 140 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k----~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v---------------- 140 (492)
...+|.+|-.-+-++...-.....+ .|..+|+...-|+||++.++..|||||||+|+|++
T Consensus 362 S~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~ 441 (1051)
T KOG0210|consen 362 SSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMD 441 (1051)
T ss_pred hhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHH
Confidence 9999999999999998888877765 37899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy11923 141 -------------------------------------------------------------------------------- 140 (492)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (492)
T Consensus 442 eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~ 521 (1051)
T KOG0210|consen 442 EVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAK 521 (1051)
T ss_pred HHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEee
Confidence
Q ss_pred -------------------------------------EcCCCCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHH
Q psy11923 141 -------------------------------------EDPNDPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAF 183 (492)
Q Consensus 141 -------------------------------------~~~~~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~ 183 (492)
.+...++...|.||++..+...... ....
T Consensus 522 Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~--------------NdWl 587 (1051)
T KOG0210|consen 522 RDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY--------------NDWL 587 (1051)
T ss_pred cccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc--------------chhh
Confidence 1233578888999998877665542 2345
Q ss_pred HHHHHHHhhcCceEEEeeeeccCCCCCCCCCc--------c---CC---CCC-CCCCCCcEEEEEEeeeCCCCCChHHHH
Q psy11923 184 NNAYYELGGLGERVLGFCDLLLPADKFPLGFK--------F---DC---DEP-NFPLTGMRFVGLMSMIDPPRAAVPDAV 248 (492)
Q Consensus 184 ~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~--------~---~~---~~~-~~~~~~~~~~G~i~l~D~lr~~a~~~I 248 (492)
++...+++.+|+|+|.+|++.+.+++++.-+. . .. +.. .++|.|++++|+.++||+++++++.++
T Consensus 588 eEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tL 667 (1051)
T KOG0210|consen 588 EEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTL 667 (1051)
T ss_pred hhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHH
Confidence 66778899999999999999998877642110 0 00 012 267899999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHhhcccccccc---------------------------------------------
Q psy11923 249 AKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGV--------------------------------------------- 283 (492)
Q Consensus 249 ~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~--------------------------------------------- 283 (492)
+.||++|||+||+|||+.|||..||+..++...|.
T Consensus 668 ElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~ 747 (1051)
T KOG0210|consen 668 ELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYED 747 (1051)
T ss_pred HHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999999999876543221
Q ss_pred ------------ccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcce
Q psy11923 284 ------------QYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAA 351 (492)
Q Consensus 284 ------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~ 351 (492)
...+++|++|+ .+.++.++ ..+++|+-+| ||-||...+.+
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA--~v~~llq~---------~t~krvc~IG-----------------DGGNDVsMIq~ 799 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKA--QVVRLLQK---------KTGKRVCAIG-----------------DGGNDVSMIQA 799 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHH--HHHHHHHH---------hhCceEEEEc-----------------CCCccchheee
Confidence 12234444442 11111111 1234455555 55666666777
Q ss_pred eeeeeeec-cccchHHHHHhhchhccCCCchhHHhHHH-hhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHhcCCCChHH
Q psy11923 352 VVHGSVAM-GIAGSDVSKQAADMILLDDNFASIVTGVE-EGRLIFDNLKKSIAYTLTSNIPEISPFLTFILLDIPLPLGT 429 (492)
Q Consensus 352 a~~g~ia~-g~~gs~~a~~aADivl~~~~l~~l~~~i~-~gR~~~~~i~~~~~~~~~~ni~~~~~~~~~~~~~~~~~~~~ 429 (492)
||+| |++ |..|.+ |.-|||+.+.+ |+++-+++. |||+.|+|..+.-+|-+-...+...++.++....-+.|.+-
T Consensus 800 A~~G-iGI~gkEGkQ-ASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~L 875 (1051)
T KOG0210|consen 800 ADVG-IGIVGKEGKQ-ASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVAL 875 (1051)
T ss_pred cccc-eeeecccccc-cchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHH
Confidence 8877 553 334444 44599999987 999999998 89999999999988887766655544444332222233333
Q ss_pred ---HHHHHHHHhhhhcccCcCCC--------------------CCCCccchheeeeeccccccceeeee
Q psy11923 430 ---VTILCIDLGTDMELTWQGKT--------------------HIPEISPFLTFILLDIPLPLGTVTIL 475 (492)
Q Consensus 430 ---~~~l~~~l~~~~~~~~~l~~--------------------~~p~~~~~~~~~~~~~~~~~~~~~~~ 475 (492)
+.+..+...++++|.|.+.. +...++...+++|..+..|+|+++..
T Consensus 876 yqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~ 944 (1051)
T KOG0210|consen 876 YQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMY 944 (1051)
T ss_pred hhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHH
Confidence 33567888899999988321 22234667888888899999987764
No 32
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-42 Score=334.57 Aligned_cols=408 Identities=23% Similarity=0.280 Sum_probs=285.9
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFALGYHWLDAVIFLIGII 80 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vl 80 (492)
|++-|.+.++++...+|++.|+..+++.++++|||-|-.+.-+..-++.+.++...-.+-+..+.+ .-.-.+...++++
T Consensus 179 v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~-g~~~~i~~LiALl 257 (681)
T COG2216 179 VLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSG-GGAASVTVLVALL 257 (681)
T ss_pred EeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcC-CCCcCHHHHHHHH
Confidence 467899999999999999999999999999999998877666655554444333322222222221 1113456678899
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCC----------------
Q psy11923 81 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPN---------------- 144 (492)
Q Consensus 81 v~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~---------------- 144 (492)
+..+|..++--.+..=..++.|+.+.|++.++++++|..|++|++++|||||+|-|+-.-.+..
T Consensus 258 V~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~l 337 (681)
T COG2216 258 VCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQL 337 (681)
T ss_pred HHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHH
Confidence 9999999988888888889999999999999999999999999999999999999985441110
Q ss_pred --------C----------------------------------------CceEEEEeCChHHHHHhccccccCCeeccCC
Q psy11923 145 --------D----------------------------------------PRHLEVMKGAPERILDKCSTIFINGKEKVLD 176 (492)
Q Consensus 145 --------~----------------------------------------~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~ 176 (492)
+ .+..-.-||+.+.+.++... .+
T Consensus 338 sSl~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~v~~---~~------ 408 (681)
T COG2216 338 ASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRE---RG------ 408 (681)
T ss_pred hhhccCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCCCCceeecccHHHHHHHHHh---cC------
Confidence 0 00012234444444433321 00
Q ss_pred HHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCC
Q psy11923 177 EEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGI 256 (492)
Q Consensus 177 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi 256 (492)
..+.++++...++.+..|- ++..+..|++++|++.++|-+|||.+|-+++||++||
T Consensus 409 g~~p~~l~~~~~~vs~~GG------------------------TPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgI 464 (681)
T COG2216 409 GHIPEDLDAAVDEVSRLGG------------------------TPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGI 464 (681)
T ss_pred CCCCHHHHHHHHHHHhcCC------------------------CceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCC
Confidence 0011223333344444443 3444557899999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhc
Q psy11923 257 KVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRL 336 (492)
Q Consensus 257 ~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~ 336 (492)
|.+|+||||+.||.+||++.|.|. ..++..||+| ++.+++.|. .++-|+|.|
T Consensus 465 kTvM~TGDN~~TAa~IA~EAGVDd---fiAeatPEdK-~~~I~~eQ~-----------~grlVAMtG------------- 516 (681)
T COG2216 465 KTVMITGDNPLTAAAIAAEAGVDD---FIAEATPEDK-LALIRQEQA-----------EGRLVAMTG------------- 516 (681)
T ss_pred eEEEEeCCCHHHHHHHHHHhCchh---hhhcCChHHH-HHHHHHHHh-----------cCcEEEEcC-------------
Confidence 999999999999999999999997 8899999999 577777774 377788765
Q ss_pred CCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHhhhhHHHHHHHHHHHHhhhhhh---hHH
Q psy11923 337 NIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP---EIS 413 (492)
Q Consensus 337 ~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~gR~~~~~i~~~~~~~~~~ni~---~~~ 413 (492)
||.||+||+++||+| +||. +|+++|||++.+|=+|+|..++.+.+..|++..-+=-..-.|++..-+. .++
T Consensus 517 ----DGTNDAPALAqAdVg-~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIi 590 (681)
T COG2216 517 ----DGTNDAPALAQADVG-VAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAII 590 (681)
T ss_pred ----CCCCcchhhhhcchh-hhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHH
Confidence 559999999999999 9999 9999999999999999999999999999998654333333333332222 123
Q ss_pred HHHHHHHh---------cCCCChHHHH-HHHHH-HhhhhcccCcCC--CCCCCccchheeeeeccccccceeeeee
Q psy11923 414 PFLTFILL---------DIPLPLGTVT-ILCID-LGTDMELTWQGK--THIPEISPFLTFILLDIPLPLGTVTILC 476 (492)
Q Consensus 414 ~~~~~~~~---------~~~~~~~~~~-~l~~~-l~~~~~~~~~l~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 476 (492)
+.++..++ .+..|-+.+. -+.+| ++.-.+..+++. .-.|.....++.+-+.+|...+.+.-|.
T Consensus 591 PA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~~lL~rNl~iYGlGGli~PFi 666 (681)
T COG2216 591 PAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYKPLSASALLRRNLLIYGLGGLIVPFI 666 (681)
T ss_pred HHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhCeEEEecCceeehhH
Confidence 33333222 1224444332 23333 333334444432 3345555556655556666666655554
No 33
>KOG0209|consensus
Probab=100.00 E-value=6.6e-35 Score=298.23 Aligned_cols=255 Identities=18% Similarity=0.262 Sum_probs=196.9
Q ss_pred ceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cC-c----HHHHHHH
Q psy11923 3 TSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFAL--GY-H----WLDAVIF 75 (492)
Q Consensus 3 ~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~----~~~~~~~ 75 (492)
.|-+.+.|.+||.+|..|++++.+-...++-|.-.+.. +..++ +.++++++. .|+.| |. + -..-++-
T Consensus 359 Dggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~Et--f~FIL--FLlVFAiaA--a~Yvwv~Gskd~~RsrYKL~Le 432 (1160)
T KOG0209|consen 359 DGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNRET--FIFIL--FLLVFAIAA--AGYVWVEGSKDPTRSRYKLFLE 432 (1160)
T ss_pred CCCeEEEEEeccccccCCceeeeEEecceeeeeccHHH--HHHHH--HHHHHHHHh--hheEEEecccCcchhhhheeee
Confidence 57799999999999999999998876555555443332 22222 222222221 22222 11 1 1222334
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHhhcCccEEEcCCCCccCCCceEE---------------
Q psy11923 76 LIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTT--------------- 140 (492)
Q Consensus 76 ~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v--------------- 140 (492)
.+-++...+|.-||+-.+++.-.+...++|.|++|..+-.+--.|+||.-|||||||||+..|.|
T Consensus 433 C~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~ 512 (1160)
T KOG0209|consen 433 CTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTP 512 (1160)
T ss_pred eeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccc
Confidence 44456677899999999999999999999999999999999999999999999999999999999
Q ss_pred ----------------------------------------------------------------------------Ec--
Q psy11923 141 ----------------------------------------------------------------------------ED-- 142 (492)
Q Consensus 141 ----------------------------------------------------------------------------~~-- 142 (492)
.+
T Consensus 513 ~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~ 592 (1160)
T KOG0209|consen 513 ASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQ 592 (1160)
T ss_pred hhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcc
Confidence 00
Q ss_pred --CCCCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCCCC
Q psy11923 143 --PNDPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDCDE 220 (492)
Q Consensus 143 --~~~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~ 220 (492)
..+.+++..+||+||.|-++.. +.+.++.+...+++.+|.|||+.+++.++.-.-. +.....
T Consensus 593 ~~g~s~k~~~aVKGAPEvi~~ml~-------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~---q~rd~~ 656 (1160)
T KOG0209|consen 593 GPGSSEKYFVAVKGAPEVIQEMLR-------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS---QVRDLK 656 (1160)
T ss_pred cCCCceEEEEEecCCHHHHHHHHH-------------hCchhHHHHHHHHhhccceEEEEecccccccchh---hhhhhh
Confidence 0124688899999999888764 3556777888999999999999999998842111 111223
Q ss_pred CCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 221 PNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 221 ~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.+.+|.|+++.|.+.+.=|+|+|++++|+.|++.+.+++|+||||+.||.++|+++|+.
T Consensus 657 Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 657 REDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred hhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 44588999999999999999999999999999999999999999999999999999875
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.84 E-value=4.8e-21 Score=179.50 Aligned_cols=190 Identities=26% Similarity=0.302 Sum_probs=122.6
Q ss_pred ccEEEcCCCCccCCCceEEEcCCCCceEEEEeCChHHHHHhccccccCCeeccCCHHHHHHHHHHHHH--------Hhhc
Q psy11923 122 TSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKGAPERILDKCSTIFINGKEKVLDEEMREAFNNAYYE--------LGGL 193 (492)
Q Consensus 122 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~ 193 (492)
|++||||||||||+|++.+.. -..+.++..+... ...++||+..++.....+.... ..+.
T Consensus 1 i~~i~fDktGTLt~~~~~v~~-----------~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVAP-----------PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWSKSLESFSEFIGR 68 (215)
T ss_dssp ESEEEEECCTTTBESHHEEES-----------CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHHSCCEEEEEETTT
T ss_pred CeEEEEecCCCcccCeEEEEe-----------ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccchhhhhhheeeeec
Confidence 689999999999999999911 2345555555443 3788899988877766553322 0011
Q ss_pred CceEEEeeeeccCCCCCCC--------------CCccCCCCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEE
Q psy11923 194 GERVLGFCDLLLPADKFPL--------------GFKFDCDEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVI 259 (492)
Q Consensus 194 G~r~l~~a~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~ 259 (492)
|.......... +..++.. .....+........+++++|.+.+.|++||+++++|+.|+++|++++
T Consensus 69 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~ 147 (215)
T PF00702_consen 69 GISGDVDGIYL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVA 147 (215)
T ss_dssp EEEEEEHCHEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEE
T ss_pred ccccccccccc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhhhhhhccCccee
Confidence 11100000000 0000000 00000011122224899999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHhhccccccccccccC--ChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHhcC
Q psy11923 260 MVTGDHPITAKIIEADTTEDQSGVQYDRT--SPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALRLN 337 (492)
Q Consensus 260 mlTGD~~~tA~~ia~~~gi~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~ 337 (492)
|+|||+..+|.++++++|+.. ...+++. +|++|.+.++.+..+. ..+.|.|+|||
T Consensus 148 i~TGD~~~~a~~~~~~lgi~~-~~v~a~~~~kP~~k~~~~~i~~l~~----------~~~~v~~vGDg------------ 204 (215)
T PF00702_consen 148 ILTGDNESTASAIAKQLGIFD-SIVFARVIGKPEPKIFLRIIKELQV----------KPGEVAMVGDG------------ 204 (215)
T ss_dssp EEESSEHHHHHHHHHHTTSCS-EEEEESHETTTHHHHHHHHHHHHTC----------TGGGEEEEESS------------
T ss_pred eeecccccccccccccccccc-ccccccccccccchhHHHHHHHHhc----------CCCEEEEEccC------------
Confidence 999999999999999999942 3366777 9999955444433321 13468887766
Q ss_pred CcccccChhhhccee
Q psy11923 338 IPVSEVNPREAKAAV 352 (492)
Q Consensus 338 ~~~dgvnd~~al~~a 352 (492)
+||.+|++.|
T Consensus 205 -----~nD~~al~~A 214 (215)
T PF00702_consen 205 -----VNDAPALKAA 214 (215)
T ss_dssp -----GGHHHHHHHS
T ss_pred -----HHHHHHHHhC
Confidence 6777776655
No 35
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.61 E-value=4.6e-15 Score=140.76 Aligned_cols=118 Identities=28% Similarity=0.538 Sum_probs=108.0
Q ss_pred CcceeEEEEEEEecccchHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCcHHHHHHHHHH
Q psy11923 1 MVTSTAKGVVISCGDNTVMGRIAGLASGLDTGETPIAKEIHHFIHIITGVAVFLGVSFFIIAFA--LGYHWLDAVIFLIG 78 (492)
Q Consensus 1 v~~G~~~~~V~~~G~~T~~gki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~ 78 (492)
+++|+++++|++||.+|.++++.+.+.+.+.+++++++.++++..++++++++++++++++|+. ...+|...+.++++
T Consensus 111 v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (230)
T PF00122_consen 111 VVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAIS 190 (230)
T ss_dssp EEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHH
T ss_pred ccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccccccccccccccc
Confidence 3589999999999999999999999999888889999999999999999999999888888877 56788899999999
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHHh
Q psy11923 79 IIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVET 118 (492)
Q Consensus 79 vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le~ 118 (492)
+++++|||+|++++++++..+.++++++|+++|+++++|+
T Consensus 191 ~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 191 LLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred eeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 9999999999999999999999999999999999999995
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.83 E-value=2.7e-08 Score=81.75 Aligned_cols=129 Identities=14% Similarity=0.130 Sum_probs=97.1
Q ss_pred CcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhc
Q psy11923 227 GMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAE 306 (492)
Q Consensus 227 ~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 306 (492)
-+++.+.++-.-++=++++++|+.|++. +++++-|||.+.+....|+.+|++.. .+++.-.|+.|. ..+.++.++
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-rv~a~a~~e~K~-~ii~eLkk~-- 92 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-RVFAGADPEMKA-KIIRELKKR-- 92 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-eeecccCHHHHH-HHHHHhcCC--
Confidence 4677888888899999999999999999 99999999999999999999997754 355666677663 344444432
Q ss_pred ccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccc-cchHHHHHhhchhccCCCchhHHh
Q psy11923 307 FKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGI-AGSDVSKQAADMILLDDNFASIVT 385 (492)
Q Consensus 307 ~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~-~gs~~a~~aADivl~~~~l~~l~~ 385 (492)
.+++.|+| +|.||.+|+..||.|-.-++. .-.+-+.++||+++-+ ...+++
T Consensus 93 ---------~~k~vmVG-----------------nGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ld 144 (152)
T COG4087 93 ---------YEKVVMVG-----------------NGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILD 144 (152)
T ss_pred ---------CcEEEEec-----------------CCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHH
Confidence 35566665 458999999999998333442 2344577899999965 666666
Q ss_pred HHH
Q psy11923 386 GVE 388 (492)
Q Consensus 386 ~i~ 388 (492)
+..
T Consensus 145 l~~ 147 (152)
T COG4087 145 LLK 147 (152)
T ss_pred Hhh
Confidence 543
No 37
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.08 E-value=1.4e-05 Score=75.09 Aligned_cols=120 Identities=15% Similarity=0.166 Sum_probs=80.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc---------c----cccc-CChhHHHHHHHHhhhhh
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG---------V----QYDR-TSPGFKALARIATLCNR 304 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~---------~----~~~~-~~~~~k~~~~~~~~~~~ 304 (492)
+++|++++.++.|++.|+++.++||.....+..+.+..|+..-- . .... ..+..| ...+...+++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k-~~~~~~~~~~ 163 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYK-GKTLLILLRK 163 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCccc-HHHHHHHHHH
Confidence 68999999999999999999999999999999999998876410 0 0000 000001 1111111111
Q ss_pred hcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHH
Q psy11923 305 AEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIV 384 (492)
Q Consensus 305 ~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~ 384 (492)
.... .+.+- ++||+.+|.++...+..+ ++++ +.+..+++||.++.++++..+.
T Consensus 164 ~~~~-------~~~~i-----------------~iGDs~~Di~aa~~ag~~-i~~~--~~~~~~~~a~~~i~~~~~~~~~ 216 (219)
T TIGR00338 164 EGIS-------PENTV-----------------AVGDGANDLSMIKAAGLG-IAFN--AKPKLQQKADICINKKDLTDIL 216 (219)
T ss_pred cCCC-------HHHEE-----------------EEECCHHHHHHHHhCCCe-EEeC--CCHHHHHhchhccCCCCHHHHH
Confidence 1000 11233 345667888888888777 7774 7888889999999999998876
Q ss_pred hH
Q psy11923 385 TG 386 (492)
Q Consensus 385 ~~ 386 (492)
.+
T Consensus 217 ~~ 218 (219)
T TIGR00338 217 PL 218 (219)
T ss_pred hh
Confidence 64
No 38
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.06 E-value=3e-05 Score=69.42 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=75.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCC
Q psy11923 246 DAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEG 325 (492)
Q Consensus 246 ~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~ 325 (492)
..|+.|++.|+++.++|+.+...+..+.+.+|+.. .+....|.-+.+. ..+++... -.+.+.++||.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---~f~~~kpkp~~~~---~~~~~l~~-------~~~ev~~iGD~ 107 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---FHEGIKKKTEPYA---QMLEEMNI-------SDAEVCYVGDD 107 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---EEecCCCCHHHHH---HHHHHcCc-------CHHHEEEECCC
Confidence 48999999999999999999999999999999974 2333333333222 22222110 12345555554
Q ss_pred cccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCC----chhHHhHHH
Q psy11923 326 NETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDN----FASIVTGVE 388 (492)
Q Consensus 326 ~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~----l~~l~~~i~ 388 (492)
.||.++...+..+ ++|+ ++.+..++.||.|...++ +..+.+.+.
T Consensus 108 -----------------~nDi~~~~~ag~~-~am~-nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il 155 (169)
T TIGR02726 108 -----------------LVDLSMMKRVGLA-VAVG-DAVADVKEAAAYVTTARGGHGAVREVAELIL 155 (169)
T ss_pred -----------------HHHHHHHHHCCCe-EECc-CchHHHHHhCCEEcCCCCCCCHHHHHHHHHH
Confidence 6777777777777 9999 999999999999875433 344444444
No 39
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.98 E-value=4.6e-05 Score=67.38 Aligned_cols=124 Identities=12% Similarity=0.090 Sum_probs=81.6
Q ss_pred CcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhc
Q psy11923 227 GMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAE 306 (492)
Q Consensus 227 ~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 306 (492)
+.+.++.+.+.|.. +|++|++.|+++.++||+....+..+.+..|+.. .+....|.-. .+...+++..
T Consensus 22 ~~~~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---~~~~~~~k~~---~~~~~~~~~~ 89 (154)
T TIGR01670 22 NGEEIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---LYQGQSNKLI---AFSDILEKLA 89 (154)
T ss_pred CCcEEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---EEecccchHH---HHHHHHHHcC
Confidence 35556666555543 9999999999999999999999999999999874 2222222221 2222222211
Q ss_pred ccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCC----chh
Q psy11923 307 FKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDN----FAS 382 (492)
Q Consensus 307 ~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~----l~~ 382 (492)
. -.+.+.++| |+.||.++...+..+ ++|. .+.+..+..||.++.++. |..
T Consensus 90 ~-------~~~~~~~vG-----------------Ds~~D~~~~~~ag~~-~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~ 143 (154)
T TIGR01670 90 L-------APENVAYIG-----------------DDLIDWPVMEKVGLS-VAVA-DAHPLLIPRADYVTRIAGGRGAVRE 143 (154)
T ss_pred C-------CHHHEEEEC-----------------CCHHHHHHHHHCCCe-EecC-CcCHHHHHhCCEEecCCCCCcHHHH
Confidence 0 013344444 557778887777777 8888 788888999999997653 555
Q ss_pred HHhHHH
Q psy11923 383 IVTGVE 388 (492)
Q Consensus 383 l~~~i~ 388 (492)
+.+.+.
T Consensus 144 ~~~~~~ 149 (154)
T TIGR01670 144 VCELLL 149 (154)
T ss_pred HHHHHH
Confidence 555444
No 40
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.98 E-value=2.2e-05 Score=77.75 Aligned_cols=122 Identities=14% Similarity=0.152 Sum_probs=83.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccccccc-------------cccc-CChhHHHHHHHHhhhhh
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGV-------------QYDR-TSPGFKALARIATLCNR 304 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~-------------~~~~-~~~~~k~~~~~~~~~~~ 304 (492)
++.|++.+.++.||+.|+++.++||.....+..+.+++|++..-. .... ...+.| ...+...+++
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K-~~~L~~la~~ 259 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYK-ADTLTRLAQE 259 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccH-HHHHHHHHHH
Confidence 589999999999999999999999999888888888888764100 0000 000111 1111111111
Q ss_pred hcccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHH
Q psy11923 305 AEFKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIV 384 (492)
Q Consensus 305 ~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~ 384 (492)
.... .+++. ++|||.||.+++..|..| +++ ++.+..++.||.++..+++..+.
T Consensus 260 lgi~-------~~qtI-----------------aVGDg~NDl~m~~~AGlg-iA~--nAkp~Vk~~Ad~~i~~~~l~~~l 312 (322)
T PRK11133 260 YEIP-------LAQTV-----------------AIGDGANDLPMIKAAGLG-IAY--HAKPKVNEQAQVTIRHADLMGVL 312 (322)
T ss_pred cCCC-------hhhEE-----------------EEECCHHHHHHHHHCCCe-EEe--CCCHHHHhhCCEEecCcCHHHHH
Confidence 1000 01122 357778999999999888 999 68899999999999988998887
Q ss_pred hHHH
Q psy11923 385 TGVE 388 (492)
Q Consensus 385 ~~i~ 388 (492)
.++.
T Consensus 313 ~~~~ 316 (322)
T PRK11133 313 CILS 316 (322)
T ss_pred HHhc
Confidence 7654
No 41
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.92 E-value=0.00016 Score=61.99 Aligned_cols=74 Identities=16% Similarity=0.233 Sum_probs=49.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCC
Q psy11923 246 DAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEG 325 (492)
Q Consensus 246 ~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~ 325 (492)
--|+.|.+.|+++.++||-+...++.=|+++||.. .|....+...+ ..++.++..+. .++++.+||.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---~~qG~~dK~~a---~~~L~~~~~l~-------~e~~ayiGDD 108 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---LYQGISDKLAA---FEELLKKLNLD-------PEEVAYVGDD 108 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---eeechHhHHHH---HHHHHHHhCCC-------HHHhhhhcCc
Confidence 47999999999999999999999999999999985 44443332222 23333332222 2456667776
Q ss_pred cccHHHH
Q psy11923 326 NETVEDI 332 (492)
Q Consensus 326 ~~~~~~~ 332 (492)
.+|.+.+
T Consensus 109 ~~Dlpvm 115 (170)
T COG1778 109 LVDLPVM 115 (170)
T ss_pred cccHHHH
Confidence 5555544
No 42
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.86 E-value=6.6e-05 Score=69.50 Aligned_cols=119 Identities=8% Similarity=-0.001 Sum_probs=81.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc---ccccc---------CChhHHHHHHHHhhhhhhc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG---VQYDR---------TSPGFKALARIATLCNRAE 306 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~---~~~~~---------~~~~~k~~~~~~~~~~~~~ 306 (492)
+++|++++.|+.||+.| ++.++||-....+..+++++|++..- ..+.+ ..++.|. ..+..+++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~-~~l~~l~~--- 142 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKR-QSVIAFKS--- 142 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHH-HHHHHHHh---
Confidence 68999999999999985 99999999999999999999987310 00000 1112221 11111110
Q ss_pred ccCCCchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhH
Q psy11923 307 FKGGQDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTG 386 (492)
Q Consensus 307 ~~~~~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~ 386 (492)
.+..+- ++||+.||.+++..|+.+ +++. +.+..+++||=.=.-.+.+.+..+
T Consensus 143 --------~~~~~v-----------------~vGDs~nDl~ml~~Ag~~-ia~~--ak~~~~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 143 --------LYYRVI-----------------AAGDSYNDTTMLSEAHAG-ILFH--APENVIREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred --------hCCCEE-----------------EEeCCHHHHHHHHhCCCC-EEec--CCHHHHHhCCCCCcccCHHHHHHH
Confidence 011122 456779999999999988 9985 777777777766555678888887
Q ss_pred HHhh
Q psy11923 387 VEEG 390 (492)
Q Consensus 387 i~~g 390 (492)
+.++
T Consensus 195 ~~~~ 198 (203)
T TIGR02137 195 FLKA 198 (203)
T ss_pred HHHH
Confidence 7765
No 43
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.56 E-value=0.00053 Score=62.44 Aligned_cols=114 Identities=15% Similarity=0.124 Sum_probs=76.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCC
Q psy11923 246 DAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEG 325 (492)
Q Consensus 246 ~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~ 325 (492)
..++.|+++|+++.++||.....+..+++++|+.. .+....+ | ...+...++.... -.+.+.++|
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---~f~g~~~--k-~~~l~~~~~~~gl-------~~~ev~~VG-- 119 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---LYQGQSN--K-LIAFSDLLEKLAI-------APEQVAYIG-- 119 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---eecCCCc--H-HHHHHHHHHHhCC-------CHHHEEEEC--
Confidence 59999999999999999999999999999999864 2322222 2 1223333332111 123355555
Q ss_pred cccHHHHHHhcCCcccccChhhhcceeeeeeeeccccchHHHHHhhchhccC----CCchhHHhHHHhhh
Q psy11923 326 NETVEDIALRLNIPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLD----DNFASIVTGVEEGR 391 (492)
Q Consensus 326 ~~~~~~~~~~~~~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~----~~l~~l~~~i~~gR 391 (492)
|+.||.++.+.+.+. ++++ ++.+..+..||+++-. +.+..+.+.+...|
T Consensus 120 ---------------Ds~~D~~~a~~aG~~-~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 120 ---------------DDLIDWPVMEKVGLS-VAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred ---------------CCHHHHHHHHHCCCe-EecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 457777777777676 7777 7788888899999853 23566666665444
No 44
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.55 E-value=0.00035 Score=65.08 Aligned_cols=115 Identities=18% Similarity=0.202 Sum_probs=73.6
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccccccc-ccccCChhHHHHHHHHhhhhhhcccCCCchhhc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGV-QYDRTSPGFKALARIATLCNRAEFKGGQDGAIA 316 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 316 (492)
.+++|++.+.++.+|++|.+|+++||-...-+..+|+.+|++..-. .+... .+ --.+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~--------------------dG--~ltG 133 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEID--------------------DG--KLTG 133 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEe--------------------CC--EEec
Confidence 7899999999999999999999999999999999999999874110 00000 00 0011
Q ss_pred ceeeeecCCcccHH---HHHHhcC-------CcccccChhhhcceeeeeeeeccccchHHHHHhhchhccC
Q psy11923 317 KSVGIISEGNETVE---DIALRLN-------IPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLD 377 (492)
Q Consensus 317 ~~v~~~gd~~~~~~---~~~~~~~-------~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~ 377 (492)
+.++.+-++..... ++.++.+ ..|||.||.|.+..++.+ ++++ .....+..|+...-.
T Consensus 134 ~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~-ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 134 RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLP-IAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCC-eEeC--cCHHHHHHHHHhcCh
Confidence 11222212111111 1112211 347889999999999888 8885 555555566666544
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.45 E-value=0.0008 Score=63.51 Aligned_cols=147 Identities=18% Similarity=0.146 Sum_probs=88.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc-----cccc----------cccCChhH-HHHHHHHhhhh
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ-----SGVQ----------YDRTSPGF-KALARIATLCN 303 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~-----~~~~----------~~~~~~~~-k~~~~~~~~~~ 303 (492)
+.+.+.++|++|++.|+++++.||-....+..+.+.++++. .|.. +....+.. +......+...
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 77889999999999999999999999999999988887641 1111 11111111 11111111100
Q ss_pred hh--ccc--------------CCCc-hh-------hccee---------eeecCCcccHH---HHHHhcC-------Ccc
Q psy11923 304 RA--EFK--------------GGQD-GA-------IAKSV---------GIISEGNETVE---DIALRLN-------IPV 340 (492)
Q Consensus 304 ~~--~~~--------------~~~~-~~-------~~~~v---------~~~gd~~~~~~---~~~~~~~-------~~~ 340 (492)
.. .+. ...+ .+ .+..+ .+...+.+... .+.+.++ +.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 00 000 0000 00 00001 11111222222 2333333 469
Q ss_pred cccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 341 SEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 341 dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
|+.||.+++..+..| ++|| ++.+..++.||+|..+++=..+.++++
T Consensus 181 D~~NDi~m~~~ag~~-vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFG-VAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCce-EEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 999999999999998 9999 999999999999988777666666654
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.33 E-value=0.00084 Score=62.76 Aligned_cols=145 Identities=18% Similarity=0.119 Sum_probs=84.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc-----cccc-ccc-----CChhH-HHHHHHH-h-----
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ-----SGVQ-YDR-----TSPGF-KALARIA-T----- 300 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~-----~~~~-~~~-----~~~~~-k~~~~~~-~----- 300 (492)
++-+++.++|++|++.|+++++.||-+...+..+.+.++++. .|.. +.. ..+.. ..+.... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488899999999999999999999999999999998887641 1111 000 01100 0010000 0
Q ss_pred --hhhhh----c---ccCCCchh----h---c-------ceeeeecCCcccHHHH---HHhcC-------CcccccChhh
Q psy11923 301 --LCNRA----E---FKGGQDGA----I---A-------KSVGIISEGNETVEDI---ALRLN-------IPVSEVNPRE 347 (492)
Q Consensus 301 --~~~~~----~---~~~~~~~~----~---~-------~~v~~~gd~~~~~~~~---~~~~~-------~~~dgvnd~~ 347 (492)
..... . ........ . + ..+-+...+.+....+ .+.++ +.||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00000 0 00000000 0 0 0011111222222222 22222 5699999999
Q ss_pred hcceeeeeeeeccccchHHHHHhhchhccCCCchhHHh
Q psy11923 348 AKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVT 385 (492)
Q Consensus 348 al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~ 385 (492)
++..+..| ++|+ ++.+.+++.||++..+++=..+.+
T Consensus 178 ml~~ag~~-vam~-na~~~~k~~A~~v~~~~~~~Gv~~ 213 (215)
T TIGR01487 178 LFRVVGFK-VAVA-NADDQLKEIADYVTSNPYGEGVVE 213 (215)
T ss_pred HHHhCCCe-EEcC-CccHHHHHhCCEEcCCCCCchhhh
Confidence 99999999 9999 999999999999987665444443
No 47
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.28 E-value=0.002 Score=62.25 Aligned_cols=49 Identities=22% Similarity=0.241 Sum_probs=43.7
Q ss_pred cccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHHh
Q psy11923 339 PVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE 389 (492)
Q Consensus 339 ~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~~ 389 (492)
.||+-||.+.+..+..| +||| ++.+.+++.||++...++=..+.+.+++
T Consensus 211 fGD~~ND~~Ml~~ag~g-vam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 211 FGDSTNDIEMLEVAGLG-VAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred eCCccccHHHHHhcCee-eecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 48999999999999999 9999 9999999999988888888888777763
No 48
>KOG1615|consensus
Probab=97.18 E-value=0.0008 Score=59.79 Aligned_cols=44 Identities=11% Similarity=0.222 Sum_probs=40.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG 282 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~ 282 (492)
.+-|+++|.+++||+.|.+|+++||--..-+..+|.++||+.++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n 131 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSN 131 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhh
Confidence 35699999999999999999999999999999999999998643
No 49
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.12 E-value=0.0028 Score=61.50 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=37.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.+.+..+++|++|++.|+++.+.||-....+..+.++++++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 58889999999999999999999999999999999887754
No 50
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.02 E-value=0.0041 Score=60.26 Aligned_cols=49 Identities=18% Similarity=0.117 Sum_probs=42.9
Q ss_pred CcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 338 IPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 338 ~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
..||+.||.+++..+..| +||| ++.+..++.||+|..+++=..+.++++
T Consensus 217 afGD~~NDi~Ml~~ag~~-vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 217 AIGDQENDIAMIEYAGVG-VAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred EECCchhhHHHHHhCCce-EEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 359999999999999999 9999 999999999999988777666766654
No 51
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.01 E-value=0.0017 Score=59.66 Aligned_cols=42 Identities=21% Similarity=0.235 Sum_probs=39.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|++.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~ 121 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY 121 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe
Confidence 689999999999999999999999999999999999988753
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.96 E-value=0.0049 Score=57.88 Aligned_cols=142 Identities=16% Similarity=0.111 Sum_probs=82.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc-----ccc----------cccc-CChhHHHH--HHH--
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ-----SGV----------QYDR-TSPGFKAL--ARI-- 298 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~-----~~~----------~~~~-~~~~~k~~--~~~-- 298 (492)
.+.+...++|++|++.|+++++.||-+...+..+.+.+|... .|. .+.. ..+++... ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477888999999999999999999999999999998887431 111 1111 11111100 000
Q ss_pred --Hhhhhhh-------c-ccCCCch-------hhcc---------eeeeecCCcccHHH---HHHhcC-------Ccccc
Q psy11923 299 --ATLCNRA-------E-FKGGQDG-------AIAK---------SVGIISEGNETVED---IALRLN-------IPVSE 342 (492)
Q Consensus 299 --~~~~~~~-------~-~~~~~~~-------~~~~---------~v~~~gd~~~~~~~---~~~~~~-------~~~dg 342 (492)
....... . .....+. .... .+-+...+.+.... +.+.++ +.||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0000000 0 0000000 0000 01111122222222 233333 46999
Q ss_pred cChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchh
Q psy11923 343 VNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFAS 382 (492)
Q Consensus 343 vnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~ 382 (492)
.||.+++..+..| ++|+ ++.+..++.||.|..+++-..
T Consensus 175 ~NDi~m~~~ag~~-vam~-Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFG-VAVA-NAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCce-EEcC-ChhHHHHHhcCeecCCCCCCc
Confidence 9999999999998 9999 999999999999987666555
No 53
>PRK10976 putative hydrolase; Provisional
Probab=96.95 E-value=0.004 Score=60.19 Aligned_cols=41 Identities=15% Similarity=0.240 Sum_probs=36.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++-+...++|++++++|+++++.||-....+..+.+++|++
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47788999999999999999999999999999988887653
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.64 E-value=0.015 Score=56.34 Aligned_cols=49 Identities=29% Similarity=0.257 Sum_probs=42.7
Q ss_pred CcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 338 IPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 338 ~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
+.||+.||.+++..+.+| ++|| ++.+..++.||.+..+++=..+.++++
T Consensus 220 ~~GD~~NDi~m~~~ag~~-vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 220 AFGDNFNDISMLEAAGLG-VAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred EeCCChhhHHHHHhcCce-EEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 569999999999999998 9999 888888999999998877777777664
No 55
>PRK08238 hypothetical protein; Validated
Probab=96.62 E-value=0.022 Score=59.65 Aligned_cols=40 Identities=25% Similarity=0.277 Sum_probs=38.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi 278 (492)
|++|++.+.++++|++|+++.++|+-.+..+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999987
No 56
>PLN02954 phosphoserine phosphatase
Probab=96.56 E-value=0.018 Score=54.08 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=39.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
+++|+++++++.|++.|+++.++||.....+..+.+.+|++.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~ 125 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP 125 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh
Confidence 478999999999999999999999999999999999999863
No 57
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=96.56 E-value=0.017 Score=53.25 Aligned_cols=40 Identities=10% Similarity=0.038 Sum_probs=36.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+++.++.|+++ +++.++|+-....+..+.+.+|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc
Confidence 4689999999999999 999999999999999999988875
No 58
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=96.49 E-value=0.006 Score=55.54 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=37.4
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccccc
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQS 281 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~ 281 (492)
+++.+.|+.++++|++++++||+....+..+++.+|++..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD 131 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce
Confidence 7788999999999999999999999999999999998753
No 59
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.36 E-value=0.02 Score=52.94 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=38.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
-++.||+.+++++|+++|+++.++|+.....+..+-+..|+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 378899999999999999999999999999998888888875
No 60
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.29 E-value=0.023 Score=53.18 Aligned_cols=42 Identities=14% Similarity=0.091 Sum_probs=38.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.++.||+.+.++.|++.|+++.++||........+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468999999999999999999999999999999998888875
No 61
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.19 E-value=0.018 Score=54.55 Aligned_cols=47 Identities=26% Similarity=0.145 Sum_probs=38.7
Q ss_pred CcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhH
Q psy11923 338 IPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTG 386 (492)
Q Consensus 338 ~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~ 386 (492)
..||+.||.+.+..++.| ++|+ ++++..++.||.+....+=..+.++
T Consensus 207 ~~GD~~ND~~Ml~~~~~~-~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 207 AFGDSENDIEMLELAGYS-VAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp EEESSGGGHHHHHHSSEE-EEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred EeecccccHhHHhhcCeE-EEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 359999999999999999 9999 9999999999998876544555443
No 62
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.17 E-value=0.018 Score=55.37 Aligned_cols=46 Identities=26% Similarity=0.188 Sum_probs=39.0
Q ss_pred CcccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHh
Q psy11923 338 IPVSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVT 385 (492)
Q Consensus 338 ~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~ 385 (492)
..||+.||.+++..+..+ ++|+ ++.+..++.||++..+++=..+.+
T Consensus 209 ~~GD~~nD~~m~~~~~~~-~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 209 AFGDGMNDIEMLEAAGYG-VAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred EeCCcHHhHHHHHhCCce-eEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 469999999999999998 9999 899999999999987766554443
No 63
>KOG4383|consensus
Probab=95.97 E-value=0.07 Score=56.14 Aligned_cols=54 Identities=15% Similarity=0.270 Sum_probs=50.2
Q ss_pred CCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 226 TGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.+..+.|++.+.-+.+++....|+.|-++-||.+-.|-.++...+-.|.++|+.
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiE 866 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIE 866 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccc
Confidence 456799999999999999999999999999999999999999999999998875
No 64
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=95.86 E-value=0.047 Score=51.17 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=75.6
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccc------cccccCChhHHHHHHHHhhhhhhcccCC
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSG------VQYDRTSPGFKALARIATLCNRAEFKGG 310 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~------~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 310 (492)
..++-|+++++++.|+++|++..++|+++...+..+.+..|+..-- .......|.-. .+...++....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~---~l~~~~~~~~~--- 160 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPE---PLLLLLEKLGL--- 160 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHH---HHHHHHHHhCC---
Confidence 4578899999999999999999999999999999999998876411 11111112211 11222222111
Q ss_pred CchhhcceeeeecCCcccHHHHHHhcCCcccccChhhhcceee---eeeeeccc-cchHHHHHhhchhccCCCchhHHhH
Q psy11923 311 QDGAIAKSVGIISEGNETVEDIALRLNIPVSEVNPREAKAAVV---HGSVAMGI-AGSDVSKQAADMILLDDNFASIVTG 386 (492)
Q Consensus 311 ~~~~~~~~v~~~gd~~~~~~~~~~~~~~~~dgvnd~~al~~a~---~g~ia~g~-~gs~~a~~aADivl~~~~l~~l~~~ 386 (492)
. .+++-|+||. .+|..+-+.|. +| +..|. ++.......+|.++-+ +..+...
T Consensus 161 ---~-~~~~l~VGDs-----------------~~Di~aA~~Ag~~~v~-v~~g~~~~~~l~~~~~d~vi~~--~~el~~~ 216 (220)
T COG0546 161 ---D-PEEALMVGDS-----------------LNDILAAKAAGVPAVG-VTWGYNSREELAQAGADVVIDS--LAELLAL 216 (220)
T ss_pred ---C-hhheEEECCC-----------------HHHHHHHHHcCCCEEE-EECCCCCCcchhhcCCCEEECC--HHHHHHH
Confidence 1 1245666665 45544443332 44 66663 2456677779999844 7777665
Q ss_pred HH
Q psy11923 387 VE 388 (492)
Q Consensus 387 i~ 388 (492)
+.
T Consensus 217 l~ 218 (220)
T COG0546 217 LA 218 (220)
T ss_pred Hh
Confidence 54
No 65
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=95.57 E-value=0.052 Score=48.63 Aligned_cols=40 Identities=15% Similarity=0.282 Sum_probs=37.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++|++.+.++.+++.|++++++||.....+..+++..|++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6899999999999999999999999999999999988875
No 66
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=95.54 E-value=0.067 Score=49.88 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=36.6
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTT 277 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~g 277 (492)
-+++|++.+.++.|++.|+++.++||........+.+..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~ 108 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIV 108 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC
Confidence 5799999999999999999999999999998888887764
No 67
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=95.52 E-value=0.043 Score=46.21 Aligned_cols=44 Identities=14% Similarity=0.059 Sum_probs=40.5
Q ss_pred eeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccc
Q psy11923 235 SMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 235 ~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi 278 (492)
.-..++++++++.++.|++.|++++++||.....+....+..|+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCC
Confidence 45568999999999999999999999999999999999998876
No 68
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=95.37 E-value=0.022 Score=52.39 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=40.4
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
..+++|++.+.++.++++|++++++||-....+..+++.+|++.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~ 128 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN 128 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc
Confidence 45789999999999999999999999999999999999998763
No 69
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=95.31 E-value=0.064 Score=49.67 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=37.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.|++.++++.|+++|+++.++|+-+...+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68999999999999999999999999999999888888874
No 70
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=95.20 E-value=0.18 Score=48.65 Aligned_cols=42 Identities=7% Similarity=-0.037 Sum_probs=39.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVY 161 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCC
Confidence 467999999999999999999999999999999999988874
No 71
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.12 E-value=0.099 Score=50.77 Aligned_cols=42 Identities=10% Similarity=0.094 Sum_probs=37.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.++.|++.++++.|++.|+++.++|+-....+..+.+..|+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 478999999999999999999999999998888887777764
No 72
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=94.89 E-value=0.15 Score=47.44 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=38.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
++.||+.++++.|+++|+++.++|+.....+..+-+..|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 378999999999999999999999999999998888888763
No 73
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=94.51 E-value=0.22 Score=46.54 Aligned_cols=43 Identities=16% Similarity=0.246 Sum_probs=38.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
-++.||+.++++.|++.|+++.++|+........+.+..|+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4688999999999999999999999999999999988888753
No 74
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=94.51 E-value=0.14 Score=49.80 Aligned_cols=42 Identities=12% Similarity=0.079 Sum_probs=38.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
++.||+.++++.|++.|+++.++|+.+...+..+-+..|+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~ 183 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS 183 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 678999999999999999999999999999999988888753
No 75
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=94.32 E-value=0.015 Score=52.70 Aligned_cols=31 Identities=35% Similarity=0.435 Sum_probs=25.4
Q ss_pred CCChHHHHHHHHHHhhhhcccCcCCCCCCCc
Q psy11923 424 PLPLGTVTILCIDLGTDMELTWQGKTHIPEI 454 (492)
Q Consensus 424 ~~~~~~~~~l~~~l~~~~~~~~~l~~~~p~~ 454 (492)
|.|++++|++|+|+++|.+|+++++.++|+-
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~ 31 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDP 31 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-ST
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchh
Confidence 7899999999999999999999988777663
No 76
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=94.23 E-value=0.29 Score=41.55 Aligned_cols=42 Identities=26% Similarity=0.237 Sum_probs=36.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHhhccccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDH--------PITAKIIEADTTEDQ 280 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~--------~~tA~~ia~~~gi~~ 280 (492)
++.|++.++++.|+++|+++.++|+.. ......+.+..|+..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~ 74 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPI 74 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCE
Confidence 578999999999999999999999988 777788888887753
No 77
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=94.15 E-value=0.21 Score=46.56 Aligned_cols=42 Identities=26% Similarity=0.194 Sum_probs=38.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.++.||+.+.++.|++.|+++.++|+-..+.+..+-+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888875
No 78
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=93.95 E-value=0.29 Score=46.80 Aligned_cols=41 Identities=22% Similarity=0.312 Sum_probs=36.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|++.|+++.++|+.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999998887777664
No 79
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=93.94 E-value=0.21 Score=46.62 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=35.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADT 276 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~ 276 (492)
+++||+.+.++.|++.|+++.++||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999999999888776
No 80
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=93.77 E-value=0.47 Score=45.84 Aligned_cols=40 Identities=23% Similarity=0.278 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi 278 (492)
++.||+.++++.|++.|+++.++||.....+..+-+..++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5789999999999999999999999999888776665543
No 81
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=93.69 E-value=0.22 Score=44.88 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=38.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 489999999999999999999999999999999988887764
No 82
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=93.40 E-value=0.34 Score=45.64 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=36.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999988888777777764
No 83
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=92.96 E-value=0.3 Score=46.21 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=35.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcC----CCHHHHHHHHhhccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTG----DHPITAKIIEADTTE 278 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTG----D~~~tA~~ia~~~gi 278 (492)
.+.|++++.++.|++.|+++.++|+ -...|+..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3678899999999999999999999 457799999998888
No 84
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=92.93 E-value=0.63 Score=42.53 Aligned_cols=41 Identities=20% Similarity=0.432 Sum_probs=37.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|++.|+++.++|+-+......+.+..|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999988888888888874
No 85
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=92.45 E-value=0.69 Score=43.69 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=35.5
Q ss_pred ccccChhhhcceeeeeeeeccccchHHHHHhhc----hhccCCCchhHHhHHH
Q psy11923 340 VSEVNPREAKAAVVHGSVAMGIAGSDVSKQAAD----MILLDDNFASIVTGVE 388 (492)
Q Consensus 340 ~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aAD----ivl~~~~l~~l~~~i~ 388 (492)
||+.||.+++..+..| ++|+ ++.+..++.|| +|...++=..+.++|.
T Consensus 182 GD~~nD~~ml~~~~~~-iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 182 GDSGNDEEMLRGLTLG-VVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred cCCccHHHHHcCCCcE-EEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 4557888888888888 9999 89999999999 6655555555666554
No 86
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=92.03 E-value=0.38 Score=44.75 Aligned_cols=39 Identities=13% Similarity=0.174 Sum_probs=35.4
Q ss_pred CCCCChHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHhhcc
Q psy11923 239 PPRAAVPDAVA-KCRSAGIKVIMVTGDHPITAKIIEADTT 277 (492)
Q Consensus 239 ~lr~~a~~~I~-~L~~~Gi~v~mlTGD~~~tA~~ia~~~g 277 (492)
.++|++.++|+ .++++|.+++++|+-....+..+|+..+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~ 133 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSN 133 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcc
Confidence 57999999995 8999999999999999999999998743
No 87
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=91.88 E-value=0.95 Score=43.56 Aligned_cols=41 Identities=7% Similarity=-0.014 Sum_probs=37.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 57899999999999999999999999999999888888875
No 88
>PLN02887 hydrolase family protein
Probab=91.85 E-value=0.2 Score=53.75 Aligned_cols=47 Identities=21% Similarity=0.255 Sum_probs=39.5
Q ss_pred ccccChhhhcceeeeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 340 VSEVNPREAKAAVVHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 340 ~dgvnd~~al~~a~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
||+.||.+++..+..| +||| ++.+..++.||+|..+++=..+.++++
T Consensus 530 GDs~NDIeMLe~AG~g-VAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 530 GDGENDIEMLQLASLG-VALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred ecchhhHHHHHHCCCE-EEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 6668888888888888 9999 999999999999987777677766654
No 89
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=91.84 E-value=0.68 Score=41.42 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=36.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHhhccccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDH-PITAKIIEADTTEDQ 280 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~-~~tA~~ia~~~gi~~ 280 (492)
.++.|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+..
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~ 85 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV 85 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE
Confidence 3567999999999999999999999987 677788888887753
No 90
>PRK11590 hypothetical protein; Provisional
Probab=91.58 E-value=0.48 Score=44.03 Aligned_cols=40 Identities=18% Similarity=0.127 Sum_probs=36.3
Q ss_pred CCCCChHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHhhccc
Q psy11923 239 PPRAAVPDAV-AKCRSAGIKVIMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 239 ~lr~~a~~~I-~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi 278 (492)
.++|++.+.| +.|++.|.+++++|+-....+..+++.+|+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~ 135 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPW 135 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccc
Confidence 5689999999 678999999999999999999999998874
No 91
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=91.57 E-value=0.67 Score=40.74 Aligned_cols=83 Identities=12% Similarity=0.164 Sum_probs=55.7
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc--cccc----ccccCChhHHHHHHHHhhhhhhcccCC
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED--QSGV----QYDRTSPGFKALARIATLCNRAEFKGG 310 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~--~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~ 310 (492)
..++.|++.+.++.|++.|++++++|+-.........+..|+. .+.. ......|+...+..+.+.. .+
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~---~~--- 148 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKL---GI--- 148 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHH---TS---
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHc---CC---
Confidence 3467899999999999999999999999999999998888876 2211 1222344444443333222 11
Q ss_pred CchhhcceeeeecCCcccH
Q psy11923 311 QDGAIAKSVGIISEGNETV 329 (492)
Q Consensus 311 ~~~~~~~~v~~~gd~~~~~ 329 (492)
..+.+-++||...+.
T Consensus 149 ----~p~~~~~vgD~~~d~ 163 (176)
T PF13419_consen 149 ----PPEEILFVGDSPSDV 163 (176)
T ss_dssp ----SGGGEEEEESSHHHH
T ss_pred ----CcceEEEEeCCHHHH
Confidence 135577888875443
No 92
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=91.55 E-value=0.78 Score=41.94 Aligned_cols=43 Identities=14% Similarity=0.017 Sum_probs=38.8
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.+++.++++++++.|++.|+++.++||-....+..+-+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557788899999999999999999999999999999988875
No 93
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=91.41 E-value=1.2 Score=40.11 Aligned_cols=53 Identities=13% Similarity=-0.014 Sum_probs=42.6
Q ss_pred CcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHhhcccc
Q psy11923 227 GMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGD-HPITAKIIEADTTED 279 (492)
Q Consensus 227 ~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD-~~~tA~~ia~~~gi~ 279 (492)
++.......-+-++.||+.++++.|+++|+++.++|+- ....+..+-...|+.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 34445555555678999999999999999999999964 888888887777765
No 94
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=91.25 E-value=3.7 Score=40.19 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=41.1
Q ss_pred eeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 235 SMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 235 ~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
...+++.|++.++++.|++.|+++.++||-...++..+.+.+++.
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 367899999999999999999999999999999999988887765
No 95
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=91.24 E-value=0.73 Score=40.46 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=53.8
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhccee
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSV 319 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v 319 (492)
.-|++++=++.++++|+++.++|--++.-+...++.+|++. .+....|--+.+.+ ..+... .-.++|
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f---i~~A~KP~~~~fr~---Al~~m~-------l~~~~v 113 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF---IYRAKKPFGRAFRR---ALKEMN-------LPPEEV 113 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce---eecccCccHHHHHH---HHHHcC-------CChhHE
Confidence 45677888999999999999999999999999999999986 45555565554333 222222 124679
Q ss_pred eeecCC
Q psy11923 320 GIISEG 325 (492)
Q Consensus 320 ~~~gd~ 325 (492)
.|+||.
T Consensus 114 vmVGDq 119 (175)
T COG2179 114 VMVGDQ 119 (175)
T ss_pred EEEcch
Confidence 999985
No 96
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=91.15 E-value=1.3 Score=38.47 Aligned_cols=41 Identities=20% Similarity=0.134 Sum_probs=32.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHP---------------ITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~---------------~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|++.|+++.++|..+. .....+.+.+|+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 4689999999999999999999998762 3445556667765
No 97
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=90.60 E-value=0.28 Score=38.89 Aligned_cols=45 Identities=33% Similarity=0.488 Sum_probs=29.0
Q ss_pred HhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeCChHHHHHhccc
Q psy11923 117 ETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKGAPERILDKCST 165 (492)
Q Consensus 117 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il~~~~~ 165 (492)
+....+..+=||-+ ...|.+....++...+++|||||.|+++|++
T Consensus 46 ~~~~~~~~~pF~S~----rK~msvv~~~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 46 SKYKIVAEIPFDSE----RKRMSVVVRNDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred hhcceeEEEccCcc----cceeEEEEeCCCEEEEEcCCChHHHHHhcCC
Confidence 34445555666532 3445554433334677999999999999975
No 98
>PRK06769 hypothetical protein; Validated
Probab=90.42 E-value=0.95 Score=40.60 Aligned_cols=27 Identities=15% Similarity=0.116 Sum_probs=24.9
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCH
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHP 266 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~ 266 (492)
+.||+++++++|++.|+++.++|....
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 689999999999999999999998763
No 99
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=90.36 E-value=0.45 Score=43.72 Aligned_cols=159 Identities=12% Similarity=0.122 Sum_probs=94.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccc-----ccc-CChhHHH------------------
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQ-----YDR-TSPGFKA------------------ 294 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~-----~~~-~~~~~k~------------------ 294 (492)
++-||+.++++.|++. ...+++|---.+-+.++|..+|+...... +++ --|+...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5679999999999887 45666676778889999998887533221 221 1122111
Q ss_pred HHHHHhhhhhhcccCCCchhhcceeeeecCCccc--HHHHHH------hcCCcccccChhhhcceee-eeeeeccccchH
Q psy11923 295 LARIATLCNRAEFKGGQDGAIAKSVGIISEGNET--VEDIAL------RLNIPVSEVNPREAKAAVV-HGSVAMGIAGSD 365 (492)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~--~~~~~~------~~~~~~dgvnd~~al~~a~-~g~ia~g~~gs~ 365 (492)
+..+.++..+... ..-+++...|..+|.|... .....+ ..-.+||.+.|...+..+. .|++|+.-+|.+
T Consensus 162 fe~lDe~F~rLip--~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLDELFSRLIP--SEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHhhcCH--HHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 1122222222111 0111233334444443211 111111 1124689999988877665 455787778999
Q ss_pred HHHHhhchhccCCCchhHHhHHH-hhhhHHHHHHHH
Q psy11923 366 VSKQAADMILLDDNFASIVTGVE-EGRLIFDNLKKS 400 (492)
Q Consensus 366 ~a~~aADivl~~~~l~~l~~~i~-~gR~~~~~i~~~ 400 (492)
=|...||+.+..++.+.+..+|. +.+.-..++...
T Consensus 240 Yal~eAdVAvisp~~~a~~pvielf~e~Gkd~a~E~ 275 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIELFMERGKDRAFEV 275 (315)
T ss_pred ccccccceEEeccchhhhhHHHHHHHHHhHHHHHHH
Confidence 99999999999999999988888 555545444433
No 100
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=90.15 E-value=1.8 Score=41.31 Aligned_cols=41 Identities=15% Similarity=0.052 Sum_probs=37.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999888888875
No 101
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=90.08 E-value=1.4 Score=39.33 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999988777 5555557764
No 102
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=89.87 E-value=0.98 Score=38.26 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHhhcc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGD-HPITAKIIEADTT 277 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD-~~~tA~~ia~~~g 277 (492)
++.|++.++++.|+++|+++.++|+- .+..+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777776656555
No 103
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=89.85 E-value=0.94 Score=42.87 Aligned_cols=40 Identities=13% Similarity=0.197 Sum_probs=35.1
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHhhccccc
Q psy11923 241 RAAVPDAVAKCRSAGIKVIMVTGD----HPITAKIIEADTTEDQ 280 (492)
Q Consensus 241 r~~a~~~I~~L~~~Gi~v~mlTGD----~~~tA~~ia~~~gi~~ 280 (492)
.+++++.++.|+++|+++.++|+- ...++..+.+..|++.
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 344999999999999999999996 7779999999999864
No 104
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=89.73 E-value=1.4 Score=40.94 Aligned_cols=41 Identities=15% Similarity=0.147 Sum_probs=36.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|++.|+++.++|+=+...+...-+..|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 68999999999999999999999998888887777777764
No 105
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.33 E-value=0.23 Score=40.23 Aligned_cols=48 Identities=15% Similarity=0.191 Sum_probs=36.4
Q ss_pred EEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHh---hcccc
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEA---DTTED 279 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~---~~gi~ 279 (492)
|++...+++=|++.++|+.|+++|++++++|-....+...+++ ..|++
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 4555678889999999999999999999999998777666654 45655
No 106
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=88.83 E-value=2.6 Score=42.76 Aligned_cols=41 Identities=12% Similarity=-0.026 Sum_probs=37.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999888888865
No 107
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=88.74 E-value=1.1 Score=47.10 Aligned_cols=41 Identities=7% Similarity=0.020 Sum_probs=38.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.+.++.||+.|+++.++|+-....+..+-+.+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999999888875
No 108
>PRK11587 putative phosphatase; Provisional
Probab=88.48 E-value=1.8 Score=40.21 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=33.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi 278 (492)
++.||+.++++.|+++|+++.++|+.....+...-+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999887766655555555
No 109
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=88.17 E-value=3.2 Score=37.37 Aligned_cols=27 Identities=26% Similarity=0.461 Sum_probs=24.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDH 265 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~ 265 (492)
.+.||+.+++++|++.|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 367999999999999999999999876
No 110
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=88.07 E-value=1.7 Score=39.05 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=33.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
-++.||+.++++.|++.|+++.++|+- ..+..+-+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368999999999999999999999986 5566666677764
No 111
>KOG0203|consensus
Probab=87.73 E-value=0.067 Score=57.87 Aligned_cols=39 Identities=72% Similarity=1.257 Sum_probs=36.4
Q ss_pred cCCCCCCCccchheeeeeccccccceeeeeeeecCCCcc
Q psy11923 446 QGKTHIPEISPFLTFILLDIPLPLGTVTILCIDLGTDMI 484 (492)
Q Consensus 446 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (492)
.+..+.||+.||++|+++++|+|++++.++|++++||+.
T Consensus 775 TLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmv 813 (1019)
T KOG0203|consen 775 TLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIV 813 (1019)
T ss_pred HHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccc
Confidence 378899999999999999999999999999999999864
No 112
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=86.77 E-value=2.3 Score=38.05 Aligned_cols=39 Identities=8% Similarity=0.093 Sum_probs=31.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|+++|+++.++|+... +..+-+..|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 6789999999999999999999997432 34556666664
No 113
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=85.95 E-value=3.2 Score=36.78 Aligned_cols=41 Identities=24% Similarity=0.104 Sum_probs=31.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDH---------------PITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~---------------~~tA~~ia~~~gi~ 279 (492)
++-|++.+++++|+++|+++.++|--. ......+.+..|+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 84 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII 84 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc
Confidence 356899999999999999999999742 33455566666765
No 114
>PLN03190 aminophospholipid translocase; Provisional
Probab=85.94 E-value=1 Score=52.68 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=51.0
Q ss_pred EEEEcCCCHHHHH---------HHHhhccccccccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCccc
Q psy11923 258 VIMVTGDHPITAK---------IIEADTTEDQSGVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNET 328 (492)
Q Consensus 258 v~mlTGD~~~tA~---------~ia~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~ 328 (492)
..+++|+.-.... .++..|. -+.+++++|++|+ ++.+..++ ...+.+.++|||.||
T Consensus 819 ~lVIdG~~L~~~l~~~~~~~f~~l~~~~~----~VI~cR~sP~QKa--~IV~~vk~---------~~~~vtlaIGDGaND 883 (1178)
T PLN03190 819 ALIIDGTSLVYVLDSELEEQLFQLASKCS----VVLCCRVAPLQKA--GIVALVKN---------RTSDMTLAIGDGAND 883 (1178)
T ss_pred EEEEEcHHHHHHhhhHHHHHHHHHHHhCC----EEEEecCCHHHHH--HHHHHHHh---------cCCcEEEEECCCcch
Confidence 5789997665543 2233332 2368999999994 44444443 224678999999999
Q ss_pred HHHHHHh-cCCcccccChhhhcceeee
Q psy11923 329 VEDIALR-LNIPVSEVNPREAKAAVVH 354 (492)
Q Consensus 329 ~~~~~~~-~~~~~dgvnd~~al~~a~~ 354 (492)
+++++++ +|.-..|.--.+|..++|.
T Consensus 884 v~mIq~AdVGIGIsG~EG~qA~~aSDf 910 (1178)
T PLN03190 884 VSMIQMADVGVGISGQEGRQAVMASDF 910 (1178)
T ss_pred HHHHHhcCeeeeecCchhHHHHHhhcc
Confidence 9999875 4442233222356666653
No 115
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=85.31 E-value=3.1 Score=38.92 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=35.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.+.++.|+++|+++.++|.-+.+.+...-+..|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888888766666654
No 116
>PRK10444 UMP phosphatase; Provisional
Probab=84.79 E-value=1.1 Score=42.68 Aligned_cols=45 Identities=9% Similarity=0.165 Sum_probs=40.2
Q ss_pred EEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhc
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADT 276 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~ 276 (492)
|++.-.+++-|++.++++.|+++|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 556667788999999999999999999999999999998888764
No 117
>PRK09449 dUMP phosphatase; Provisional
Probab=84.40 E-value=3 Score=38.76 Aligned_cols=40 Identities=13% Similarity=0.127 Sum_probs=34.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.||+.++++.|+ .|+++.++|......+...-+..|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 47899999999999 68999999998888888776777764
No 118
>PLN02940 riboflavin kinase
Probab=84.32 E-value=3 Score=42.61 Aligned_cols=41 Identities=5% Similarity=0.053 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHh-hcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEA-DTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~-~~gi~ 279 (492)
++.||+.++++.|++.|+++.++|+-....+...-+ ..|+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 134 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK 134 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH
Confidence 577999999999999999999999998888776554 55653
No 119
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=84.06 E-value=2.3 Score=40.73 Aligned_cols=47 Identities=11% Similarity=-0.073 Sum_probs=34.6
Q ss_pred ccccChhhhcceeeeeeeeccccch---HHHHHh---hchhccCCCchhHHhHHH
Q psy11923 340 VSEVNPREAKAAVVHGSVAMGIAGS---DVSKQA---ADMILLDDNFASIVTGVE 388 (492)
Q Consensus 340 ~dgvnd~~al~~a~~g~ia~g~~gs---~~a~~a---ADivl~~~~l~~l~~~i~ 388 (492)
||+.||.+++..+..| ++|+ ++. +..++. +++|-.+++=..+.++++
T Consensus 201 GD~~ND~~Ml~~ag~~-vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 201 GDSPNDLPLLEVVDLA-VVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred cCCHhhHHHHHHCCEE-EEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 5567888888888888 9999 776 456765 447776777777766665
No 120
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=83.20 E-value=1.8 Score=41.52 Aligned_cols=48 Identities=23% Similarity=0.270 Sum_probs=37.3
Q ss_pred EEEeeeCC----CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHh---hcccc
Q psy11923 232 GLMSMIDP----PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEA---DTTED 279 (492)
Q Consensus 232 G~i~l~D~----lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~---~~gi~ 279 (492)
|++.-.++ +=|++.++|++|+++|++++++||....+...+++ ++|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44455566 78999999999999999999999988877554443 45654
No 121
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=83.17 E-value=1.8 Score=40.61 Aligned_cols=43 Identities=7% Similarity=0.166 Sum_probs=38.0
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.+..-+++.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999998864
No 122
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=82.45 E-value=3.8 Score=35.49 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=33.4
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhh
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEAD 275 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~ 275 (492)
+.+..+|+.+.++.|++.|+++.++|+-....+....+.
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~ 100 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK 100 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH
Confidence 334558999999999999999999999998888877665
No 123
>PLN02645 phosphoglycolate phosphatase
Probab=82.06 E-value=2 Score=42.58 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=38.8
Q ss_pred EEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHh---hcccc
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEA---DTTED 279 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~---~~gi~ 279 (492)
|++.-.+.+=|++.++|+.|++.|++++++|+....+...+++ ++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 3344456677999999999999999999999999888777774 46664
No 124
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=81.65 E-value=2.5 Score=41.13 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=35.2
Q ss_pred CC-CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 240 PR-AAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 240 lr-~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
+| |++.++++.|+++|+++.+.|+-+.+.+..+-+..|++
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 99999999999999999999977777778888888876
No 125
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=81.38 E-value=4.2 Score=40.90 Aligned_cols=42 Identities=24% Similarity=0.121 Sum_probs=32.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGD---------------HPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD---------------~~~tA~~ia~~~gi~ 279 (492)
-++.|++.++++.|+++|+++.++|.= .......+.+..|+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~ 85 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK 85 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc
Confidence 367899999999999999999999982 133455566666765
No 126
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=81.24 E-value=6 Score=36.10 Aligned_cols=40 Identities=5% Similarity=-0.078 Sum_probs=32.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++-||+.++++.|++.|+++.++|.-... ....-+..|+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 144 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL 144 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH
Confidence 57899999999999999999999975543 45555666653
No 127
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=81.10 E-value=2.6 Score=40.93 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=36.9
Q ss_pred CC-CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 240 PR-AAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 240 lr-~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
+| |++.+++++|+++|+++.+.|+-..+.+...-+.+|++.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 66 999999999999999999999888888888888888874
No 128
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=80.93 E-value=6 Score=38.63 Aligned_cols=38 Identities=24% Similarity=0.277 Sum_probs=32.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADT 276 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~ 276 (492)
++.||+.+.++.|++.|+++.++|+-+......+-+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 68899999999999999999999998888777654443
No 129
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=80.90 E-value=2.4 Score=40.59 Aligned_cols=40 Identities=13% Similarity=0.214 Sum_probs=36.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.-+.+.++|++|++.|+++++.||-....+..+.+++|++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456899999999999999999999999999999998864
No 130
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=80.13 E-value=2.4 Score=41.00 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=37.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
+.+.+++.++|++|++.|+++++.||-....+..+.+++|++
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 356678999999999999999999999999999999988764
No 131
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=79.69 E-value=5.4 Score=36.39 Aligned_cols=32 Identities=19% Similarity=0.338 Sum_probs=28.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
++.|++.++++.|++.|+++.++|.-+.....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~ 115 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT 115 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHH
Confidence 57999999999999999999999997766544
No 132
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=79.56 E-value=3.7 Score=39.19 Aligned_cols=48 Identities=17% Similarity=0.106 Sum_probs=35.8
Q ss_pred EEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHhhcccc
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDH---PITAKIIEADTTED 279 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~---~~tA~~ia~~~gi~ 279 (492)
|++.-.+.+-|++.++|++|++.|++++++||.. .+.....-++.|++
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444566777899999999999999999999744 44444445566665
No 133
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=78.24 E-value=3.7 Score=39.69 Aligned_cols=49 Identities=8% Similarity=-0.075 Sum_probs=35.4
Q ss_pred CcccccChhhhcceeeeeeeeccccchHHHH----Hhh-chhc--cCCCchhHHhHHH
Q psy11923 338 IPVSEVNPREAKAAVVHGSVAMGIAGSDVSK----QAA-DMIL--LDDNFASIVTGVE 388 (492)
Q Consensus 338 ~~~dgvnd~~al~~a~~g~ia~g~~gs~~a~----~aA-Divl--~~~~l~~l~~~i~ 388 (492)
+.||+.||.+++..+..+ ++|+ ++.+..+ +.| +.+. ..++=..+.++++
T Consensus 212 ~~GDs~NDi~m~~~ag~~-vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 212 ALGDSPNDLPMLEAADIA-VVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred EEcCChhhHHHHHhCCee-EEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 347888999999999998 9999 9998888 665 5666 3434445555443
No 134
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=78.09 E-value=3.3 Score=39.23 Aligned_cols=49 Identities=10% Similarity=0.007 Sum_probs=36.9
Q ss_pred EEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHhhccccc
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAK--IIEADTTEDQ 280 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~--~ia~~~gi~~ 280 (492)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. ..-++.|+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 444556778999999999999999999999995544433 3446677753
No 135
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=77.91 E-value=1.5 Score=36.49 Aligned_cols=67 Identities=15% Similarity=0.250 Sum_probs=46.3
Q ss_pred eCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
.+.++++.++-++.|++.|++ ++++-||++.+..++ |+++|+...-..+..-..+++....+.++.+
T Consensus 9 a~~i~~~l~~~i~~l~~~~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~ 84 (117)
T PF00763_consen 9 AKEIKEELKEEIEKLKEKGITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELIEKLNE 84 (117)
T ss_dssp HHHHHHHHHHHHHHHHHCT---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHHHHHhC
Confidence 345678889999999999987 567799999988776 6788998777777666666666666666654
No 136
>KOG3040|consensus
Probab=77.90 E-value=5.1 Score=36.62 Aligned_cols=52 Identities=17% Similarity=0.225 Sum_probs=45.2
Q ss_pred EEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhh---ccccc
Q psy11923 229 RFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEAD---TTEDQ 280 (492)
Q Consensus 229 ~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~---~gi~~ 280 (492)
.+-|.+.++|..-|++.|++++|++++.+|.-+|--.++.-+.+.++ ||++-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 46799999999999999999999999999999998888888887764 56653
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=77.73 E-value=8.5 Score=37.09 Aligned_cols=42 Identities=17% Similarity=0.081 Sum_probs=31.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITA---KIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA---~~ia~~~gi~ 279 (492)
.++-|++.+.++.|++.|+++.++|+-..... ...-+..|+.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 45679999999999999999999999654333 3334556775
No 138
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=77.29 E-value=9.7 Score=34.03 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=24.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCH
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHP 266 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~ 266 (492)
+.|++.+++++|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999997663
No 139
>PLN02811 hydrolase
Probab=75.76 E-value=10 Score=35.22 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=28.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
-++.||+.++++.|++.|+++.++||-......
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~ 109 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFD 109 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHH
Confidence 357899999999999999999999998765443
No 140
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=75.40 E-value=24 Score=38.88 Aligned_cols=61 Identities=26% Similarity=0.338 Sum_probs=37.4
Q ss_pred ceeeeecCCcccHHHHHHhcCC--cccccChhhhcceee----ee-eeec-cccch-H-HHHHhhchhccCC
Q psy11923 317 KSVGIISEGNETVEDIALRLNI--PVSEVNPREAKAAVV----HG-SVAM-GIAGS-D-VSKQAADMILLDD 378 (492)
Q Consensus 317 ~~v~~~gd~~~~~~~~~~~~~~--~~dgvnd~~al~~a~----~g-~ia~-g~~gs-~-~a~~aADivl~~~ 378 (492)
+.+.+.||.......+.+++|+ ...++.+.+.+.... .| .++| | .|. | -|...||+-+.=+
T Consensus 459 ~vvMiTGDn~~TA~aIA~elGI~~v~A~~~PedK~~iV~~lQ~~G~~VaMtG-DGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 459 ETVMCTGDNELTAATIAKEAGVDRFVAECKPEDKINVIREEQAKGHIVAMTG-DGTNDAPALAEANVGLAMN 529 (673)
T ss_pred eEEEECCCCHHHHHHHHHHcCCceEEcCCCHHHHHHHHHHHHhCCCEEEEEC-CChhhHHHHHhCCEEEEeC
Confidence 4566778988888889998886 356666655422111 12 1565 4 443 2 3667888876543
No 141
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=75.35 E-value=15 Score=33.80 Aligned_cols=40 Identities=8% Similarity=-0.080 Sum_probs=35.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.|++.+.++.|++. +++.++|+-....+..+-+..|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 6789999999999999 999999999888888888887764
No 142
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=75.19 E-value=12 Score=34.86 Aligned_cols=41 Identities=12% Similarity=0.214 Sum_probs=34.0
Q ss_pred eeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhc
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADT 276 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~ 276 (492)
++-++.||+.+++++|+++|+++.++|..+......+-+..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 34578999999999999999999999998887766655443
No 143
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=74.59 E-value=3.2 Score=40.18 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=50.4
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.++++++.++-++.|++.|++ .+++-||++....++ |+++|+...-..+..-..++...+.+.++.+
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~ 85 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNA 85 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3467888999999999999987 677899999988776 5678988766566555555555556655543
No 144
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=74.49 E-value=1.2 Score=43.12 Aligned_cols=48 Identities=8% Similarity=-0.074 Sum_probs=36.8
Q ss_pred cccccChhhhcceeeeeeeeccccch-HH-----HHHhhchhccCCCchhHHhHHH
Q psy11923 339 PVSEVNPREAKAAVVHGSVAMGIAGS-DV-----SKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 339 ~~dgvnd~~al~~a~~g~ia~g~~gs-~~-----a~~aADivl~~~~l~~l~~~i~ 388 (492)
.||+.||.+++..+..| +||| ++. +. .++.+|++....+-..+.++++
T Consensus 212 fGDs~NDi~Ml~~ag~g-vAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 212 LGDGPNDAPLLDVMDYA-VVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred EcCCHHHHHHHHhCCEE-EEec-CCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 48999999999999999 9999 444 21 2346888887777777777766
No 145
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=74.45 E-value=3.2 Score=40.20 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=50.9
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++.|++ ..++.||++....++ |+++|+...-..+.+-..+++..+.+.++.+
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 86 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNE 86 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567788999999999988887 677899999988876 5678988766666555555555566665543
No 146
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=73.84 E-value=5 Score=38.74 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=36.4
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
+-+.++++|++|++.|+++++.||-....+..+.+++|++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 4467889999999999999999999999999999999874
No 147
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=72.45 E-value=5.1 Score=37.18 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=34.8
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
+.++++|+.|+++|+++++.||-....+..+.+.++++
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34889999999999999999999999999999998865
No 148
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=72.22 E-value=3.9 Score=39.65 Aligned_cols=68 Identities=16% Similarity=0.226 Sum_probs=50.6
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.++++++.++.++.|++.|++ ..++-||++....++ |+++|+...-..+.+-..+++....+.++.+
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 85 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNH 85 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3456788999999999988887 577899999988876 5678988766666555555655556655543
No 149
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=71.36 E-value=4 Score=39.95 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=50.2
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.++++++.++.++.|++.|++ .+++-||++....++ |+++|+...-..+..-..+++..+.+.++.+
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~ 88 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNA 88 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcC
Confidence 4567889999999999998987 477889999988776 5678988765555555555555555555543
No 150
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=70.25 E-value=4.6 Score=39.46 Aligned_cols=68 Identities=18% Similarity=0.293 Sum_probs=50.4
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++.|++ .+++-||++....++ |+++|+...-..+.+-..+++....+.++.+
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 86 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNA 86 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567888999999999999986 577889999888776 5678988766566655555555555555543
No 151
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=69.68 E-value=4.8 Score=39.14 Aligned_cols=68 Identities=15% Similarity=0.235 Sum_probs=51.0
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.++++++.++-++.|++.|++ .+++-||++....++ |+++|+...-..+..-..+++....+.++.+
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~ 87 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNN 87 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567889999999999988987 467799999988876 5678988766666655556665666665543
No 152
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=68.99 E-value=15 Score=36.41 Aligned_cols=88 Identities=13% Similarity=0.155 Sum_probs=56.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhh----cccccccc-ccccCChhHHHHHHHHhhhhhhcccCCCch
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEAD----TTEDQSGV-QYDRTSPGFKALARIATLCNRAEFKGGQDG 313 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~----~gi~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 313 (492)
++.+++.++++.|+++|+.+.++|--++..|..+-+. .++...-. ......|....+..+.+.. ..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l---~i------ 101 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKL---NL------ 101 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHh---CC------
Confidence 3578999999999999999999999999999988877 66653111 1111233333333322221 11
Q ss_pred hhcceeeeecCCcccHHHHHHhc
Q psy11923 314 AIAKSVGIISEGNETVEDIALRL 336 (492)
Q Consensus 314 ~~~~~v~~~gd~~~~~~~~~~~~ 336 (492)
-...+.++||...+..+.....
T Consensus 102 -~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 102 -GTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred -CcCcEEEECCCHHHHHHHHHHC
Confidence 1256788898877666655543
No 153
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=68.44 E-value=5.1 Score=35.29 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=30.9
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
+|.+.|+++++++++++.|+++..+||-....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4677899999999999999999999999888774
No 154
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=68.06 E-value=5.5 Score=38.62 Aligned_cols=67 Identities=16% Similarity=0.238 Sum_probs=49.1
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLC 302 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~ 302 (492)
+.++++++.++-++.|++.|++ .+++-||++.+-.++ |+++|+...-..+..-..+++....+.++.
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN 84 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLN 84 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 3456788899999999998987 477899999988776 567898876556655444555555555554
No 155
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=67.58 E-value=19 Score=32.13 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=36.9
Q ss_pred eCCCCCChHHHHHHHHhCCCe--EEEEcCC-------CHHHHHHHHhhcccc
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIK--VIMVTGD-------HPITAKIIEADTTED 279 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~--v~mlTGD-------~~~tA~~ia~~~gi~ 279 (492)
++++-|+..+.+++|++.+.. |.++|-- +.+.|.++++.+|+.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 467788999999999999874 9999875 488899999999986
No 156
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=67.36 E-value=8.5 Score=33.38 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=37.0
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.-++||++.+.++.|+ .++++.+.|.=+...+..+-+.+++.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3457999999999999 57999999999999999988888774
No 157
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=67.22 E-value=5.3 Score=38.83 Aligned_cols=68 Identities=21% Similarity=0.269 Sum_probs=50.4
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++.|++ .+++-||++....++ |+++|+...-..+..-..+++....+.++.+
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~ 87 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNR 87 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcC
Confidence 4567889999999999988887 477889999888776 5678988766666555555665566665543
No 158
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=67.15 E-value=5.8 Score=38.47 Aligned_cols=68 Identities=16% Similarity=0.251 Sum_probs=50.1
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++.++.|++. |++ +.++-||++....++ |+++|+..+-..+.+-..+++..+.+.++.+
T Consensus 9 va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 86 (282)
T PRK14180 9 LSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNN 86 (282)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3466788999999999887 776 577899999988776 5678988766666565555665566665543
No 159
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=66.78 E-value=7.9 Score=37.34 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=41.2
Q ss_pred EEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhc
Q psy11923 230 FVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADT 276 (492)
Q Consensus 230 ~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~ 276 (492)
+=|++.-.+++=|++.++|++|+++|++++.+|=-...+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 45788889999999999999999999999999999888888666543
No 160
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=66.40 E-value=23 Score=33.30 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=28.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHH
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITA 269 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA 269 (492)
-|.-|++.+.++.|++.|++|+++||-.+..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r 150 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELR 150 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHH
Confidence 47789999999999999999999999887553
No 161
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=65.96 E-value=10 Score=36.95 Aligned_cols=41 Identities=10% Similarity=0.055 Sum_probs=37.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
..-+.+.++|++|+++|+.+++.||-.......+.++++++
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 45567899999999999999999999999999999999865
No 162
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=65.53 E-value=6.3 Score=38.51 Aligned_cols=68 Identities=13% Similarity=0.227 Sum_probs=50.1
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++. |++ ++++.||++..-.++ |+++|+...-..+.+-..++.....+.++.+
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 86 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNN 86 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567888999999999887 776 578899999888776 5678988766666655555555555555543
No 163
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=65.53 E-value=5.4 Score=38.76 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=52.1
Q ss_pred eeeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 235 SMIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 235 ~l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
.+.+++|++.++-++.|++. |++ .+++-||++....++ |+++|+...-..+.+...+++....+.++.+
T Consensus 15 ~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~ 93 (287)
T PRK14176 15 ALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNK 93 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 35677889999999999887 876 577899999888776 5678988766666666666666666666654
No 164
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=65.17 E-value=6.5 Score=38.20 Aligned_cols=68 Identities=15% Similarity=0.159 Sum_probs=49.5
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+..++|++.++.++.|++. |++ .+++.||++....++ |+++|+...-..+..-..+++..+.+.++.+
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~ 86 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNA 86 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3456788899999999877 776 477799999988776 5678988766566555555655566665543
No 165
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=64.56 E-value=8.2 Score=37.45 Aligned_cols=47 Identities=13% Similarity=0.157 Sum_probs=35.1
Q ss_pred EEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---hhcccc
Q psy11923 233 LMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIE---ADTTED 279 (492)
Q Consensus 233 ~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia---~~~gi~ 279 (492)
++.-.+.+=|++.++|++|++.|++++++|+....+...+. +..|++
T Consensus 12 tl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 12 VLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred ceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 34446777889999999999999999999997654444333 346665
No 166
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=64.53 E-value=6.8 Score=38.98 Aligned_cols=70 Identities=11% Similarity=0.151 Sum_probs=52.1
Q ss_pred EeeeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 234 MSMIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 234 i~l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
=.+.+++|++.++-++.|++. |++ .+++-||++....++ |+++|+...-..+.+-..+++....+.++.+
T Consensus 62 k~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~ 141 (345)
T PLN02897 62 NVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNE 141 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 346788999999999999987 776 568899999988876 6678988766566555555555555655543
No 167
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.22 E-value=7.2 Score=37.85 Aligned_cols=68 Identities=19% Similarity=0.188 Sum_probs=50.6
Q ss_pred eeCCCCCChHHHHHHHHhCCCeE---EEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIKV---IMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~v---~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.++++++.++.++.|++.|+++ +++-||++..-.++ |+++|+...-..+.+-..+++..+.+.++.+
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~ 87 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNA 87 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45678889999999999889874 66699999888776 6678988766666655556665666666543
No 168
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.22 E-value=6.9 Score=38.25 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=49.6
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++.++.+++. |++ ..++-||++....++ |+++|+...-..+..-..+++....+.++.+
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 87 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQ 87 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567888999999999877 776 477889999988876 5678988766666555555555555555543
No 169
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.17 E-value=7 Score=37.96 Aligned_cols=68 Identities=21% Similarity=0.278 Sum_probs=50.3
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.+++. |++ .+++.||++....++ |+++|+...-..+.+-..+++....+.++.+
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~ 87 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQ 87 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3466788899999999877 776 468899999888776 5678988766666655556666666666654
No 170
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=63.86 E-value=9 Score=31.78 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=30.6
Q ss_pred CCCChHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHhhccccc
Q psy11923 240 PRAAVPDAVAKCRSAGIK-VIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~-v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
..+.+.+.++++.+.|++ +|+.+|...+.+...|++.|+.-
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~v 105 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIRV 105 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-EE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCEE
Confidence 445678999999999998 99999999999999999887753
No 171
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.85 E-value=7.4 Score=37.95 Aligned_cols=68 Identities=13% Similarity=0.199 Sum_probs=49.6
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++. |++ .+++-||++....++ |+++|+...-..+.+-..+++..+.+.++.+
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 86 (293)
T PRK14185 9 ISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQ 86 (293)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4466788999999999887 777 577899999888776 5678988765556555555555556665543
No 172
>KOG0202|consensus
Probab=63.43 E-value=6.3 Score=43.40 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=33.8
Q ss_pred ccccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHh
Q psy11923 282 GVQYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALR 335 (492)
Q Consensus 282 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~ 335 (492)
...|++.+|++| ...+..+|++ ++.|+|.|||.||.+++...
T Consensus 655 ~~vFaR~~P~HK-~kIVeaLq~~-----------geivAMTGDGVNDApALK~A 696 (972)
T KOG0202|consen 655 VLVFARAEPQHK-LKIVEALQSR-----------GEVVAMTGDGVNDAPALKKA 696 (972)
T ss_pred ceEEEecCchhH-HHHHHHHHhc-----------CCEEEecCCCccchhhhhhc
Confidence 347999999999 4566666644 78899999999999998763
No 173
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.05 E-value=7.8 Score=37.65 Aligned_cols=68 Identities=18% Similarity=0.257 Sum_probs=49.2
Q ss_pred eeCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+.+|++.++-++.|++.|++ ..++-||++....++ |+++|+...-..+.+-..+++....+.++.+
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 87 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNA 87 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567889999999999988886 466689999888776 5678988765556555555555555555543
No 174
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=62.91 E-value=7 Score=33.01 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=29.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
+++.+++.++++.|++.|+++++.||-......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678899999999999999999999998876654
No 175
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=62.85 E-value=7.3 Score=38.00 Aligned_cols=68 Identities=10% Similarity=0.196 Sum_probs=49.8
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++. |++ .+++-||++....++ |+++|+...-..+..-..+++..+.+.++.+
T Consensus 10 va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~ 87 (294)
T PRK14187 10 IANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNN 87 (294)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567888999999999877 886 577899999988776 5678988766666555555555566665543
No 176
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.49 E-value=8.4 Score=37.43 Aligned_cols=68 Identities=10% Similarity=0.162 Sum_probs=49.8
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.++++++.++-++.|++. |++ .+++-||++....++ |+++|+...-..+..-..+++....+.++.+
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 86 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNT 86 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3466788999999999865 776 567799999988876 5678988766666655555665666666553
No 177
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=61.40 E-value=34 Score=39.99 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=36.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.+.||+.+.++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999988888887778875
No 178
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=61.39 E-value=12 Score=33.21 Aligned_cols=41 Identities=12% Similarity=0.199 Sum_probs=31.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHhhccccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPI------------TAKIIEADTTEDQ 280 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~------------tA~~ia~~~gi~~ 280 (492)
+-||+.++++.|+++|+++.++|.-... ....+.+..|+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~ 95 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI 95 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE
Confidence 3499999999999999999999965432 3455666677643
No 179
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=60.99 E-value=8.8 Score=37.53 Aligned_cols=68 Identities=15% Similarity=0.132 Sum_probs=49.3
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.++++++.++-++.|++. |++ ..++-||++....++ |+++|+...-..+..-..+++....+.++.+
T Consensus 11 iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~ 88 (297)
T PRK14168 11 IREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNN 88 (297)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567888999999999887 776 677899999988776 5678988655555555555555555555543
No 180
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=60.88 E-value=8.3 Score=38.64 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=50.8
Q ss_pred EeeeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhh
Q psy11923 234 MSMIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLC 302 (492)
Q Consensus 234 i~l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~ 302 (492)
-.+.+++|++.++-++.|++. |++ .+++-||++....++ |+++|+...-..+.+-..|++..+.+.++.
T Consensus 79 k~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN 157 (364)
T PLN02616 79 KAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFN 157 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHc
Confidence 357788999999999999987 776 677899999988776 567898765445555555555555565554
No 181
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=60.39 E-value=9.4 Score=37.00 Aligned_cols=68 Identities=18% Similarity=0.200 Sum_probs=49.4
Q ss_pred eeCCCCCChHHHHHHHHh-CCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRS-AGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~-~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++ .|++ .+++-||++..-.++ |+++|+...-..+..-..+++..+.+.++.+
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~ 86 (281)
T PRK14183 9 LSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNN 86 (281)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 345678889999999986 5776 467789999988776 5678988766666555556665666666553
No 182
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.92 E-value=9.5 Score=37.37 Aligned_cols=67 Identities=21% Similarity=0.313 Sum_probs=47.4
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLC 302 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~ 302 (492)
+.++++++.++.++.|++. |++ ..++-||++....++ |+++|+...-..+..-..+++....+.++.
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN 86 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLN 86 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 3456788999999999887 776 577889999887776 567898865555554445555455555554
No 183
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=57.56 E-value=56 Score=30.89 Aligned_cols=30 Identities=20% Similarity=0.016 Sum_probs=20.0
Q ss_pred ccccChhhhcce-eeeeeeeccccchHHHHHhh
Q psy11923 340 VSEVNPREAKAA-VVHGSVAMGIAGSDVSKQAA 371 (492)
Q Consensus 340 ~dgvnd~~al~~-a~~g~ia~g~~gs~~a~~aA 371 (492)
||+.||.++++. ...+ ++|+ ++.+..++.+
T Consensus 190 GD~~ND~~ml~~~~~~~-va~~-na~~~~k~~~ 220 (249)
T TIGR01485 190 GDSGNDIELFEIGSVRG-VIVS-NAQEELLQWY 220 (249)
T ss_pred ECChhHHHHHHccCCcE-EEEC-CCHHHHHHHH
Confidence 344566666665 4456 9999 8888777654
No 184
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=57.44 E-value=11 Score=34.61 Aligned_cols=30 Identities=23% Similarity=0.394 Sum_probs=26.3
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHH
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPI 267 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~ 267 (492)
-++.|++.+.++.|++.|+++.++|.....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 357899999999999999999999987543
No 185
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.41 E-value=11 Score=36.56 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=49.3
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++.++.|++. |++ .+++-||++....++ |+++|+...-..+..-..+++..+.+.++.+
T Consensus 11 va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~ 88 (285)
T PRK10792 11 IAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNA 88 (285)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567888999999999887 553 577799999888776 5678988766666555555555566665543
No 186
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=56.20 E-value=5 Score=36.03 Aligned_cols=14 Identities=36% Similarity=0.389 Sum_probs=12.7
Q ss_pred EEcCCCCccCCCce
Q psy11923 125 ICSDKTGTLTQNRM 138 (492)
Q Consensus 125 i~~DKTGTLT~~~~ 138 (492)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 68999999999983
No 187
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.92 E-value=10 Score=36.86 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=47.2
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLC 302 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~ 302 (492)
+.++++++.++-++.|++. |++ .+++-||++..-.++ |+++|+...-..+..-..+++..+.+.++.
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN 86 (288)
T PRK14171 10 LANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELN 86 (288)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHc
Confidence 3456788899999999887 876 477889999887765 567888766555554444555555555554
No 188
>PLN02887 hydrolase family protein
Probab=55.63 E-value=14 Score=39.99 Aligned_cols=51 Identities=16% Similarity=0.095 Sum_probs=42.0
Q ss_pred CCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 226 TGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.|++++.- ..++-+...++|++|+++|+++++.||-....+..+.++++++
T Consensus 315 LDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 315 MDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred CCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 45666531 2348889999999999999999999999999999998888754
No 189
>PLN02382 probable sucrose-phosphatase
Probab=55.61 E-value=9.7 Score=39.32 Aligned_cols=30 Identities=17% Similarity=-0.051 Sum_probs=24.1
Q ss_pred ccccChhhhcceee-eeeeeccccchHHHHHhh
Q psy11923 340 VSEVNPREAKAAVV-HGSVAMGIAGSDVSKQAA 371 (492)
Q Consensus 340 ~dgvnd~~al~~a~-~g~ia~g~~gs~~a~~aA 371 (492)
||+-||.+.+..+. .| ++|| ++.+..++.+
T Consensus 201 GDs~NDleMl~~ag~~g-vam~-NA~~elk~~a 231 (413)
T PLN02382 201 GDSGNDAELFSVPDVYG-VMVS-NAQEELLQWY 231 (413)
T ss_pred eCCHHHHHHHhcCCCCE-EEEc-CCcHHHHHHH
Confidence 56678888888887 68 9999 8888888643
No 190
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.29 E-value=13 Score=36.01 Aligned_cols=68 Identities=10% Similarity=0.148 Sum_probs=49.0
Q ss_pred eeCCCCCChHHHHHHHHhCCCe----EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK----VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~----v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++-++.|++.|.+ ..++-||++..-.++ |+++|+...-..+..-..+++..+.+.++.+
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 87 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNK 87 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567788999999999988842 577899999988776 6678988765556555555555566665543
No 191
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=55.04 E-value=22 Score=31.24 Aligned_cols=42 Identities=12% Similarity=0.061 Sum_probs=37.3
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.=.+||++.+.++.|++. +++.+.|.-.+..|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 335899999999999965 999999999999999999888765
No 192
>PTZ00445 p36-lilke protein; Provisional
Probab=52.90 E-value=21 Score=32.97 Aligned_cols=31 Identities=13% Similarity=0.030 Sum_probs=26.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPIT 268 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~t 268 (492)
-.++|+.++.+++|+++||++.++|=-.+++
T Consensus 74 ~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 74 TSVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred ccCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 3479999999999999999999999666544
No 193
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.15 E-value=15 Score=35.75 Aligned_cols=67 Identities=18% Similarity=0.247 Sum_probs=47.3
Q ss_pred eeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLC 302 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~ 302 (492)
+.+++|++.++-++.|++. |++ .+++-||++....++ |+++|++..-..+..-.++++....+..+.
T Consensus 11 ~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln 87 (283)
T PRK14192 11 LAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELN 87 (283)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 4567889999999999877 776 577899999998886 567898876555543334444344444443
No 194
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=51.50 E-value=28 Score=30.66 Aligned_cols=44 Identities=9% Similarity=0.020 Sum_probs=38.2
Q ss_pred eeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 235 SMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 235 ~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.+.=..||++.+.++.|.+. +++++.|--.+..|..+.+.++..
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 33445899999999999988 999999999999999999887754
No 195
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=50.77 E-value=15 Score=35.87 Aligned_cols=69 Identities=12% Similarity=0.210 Sum_probs=50.1
Q ss_pred eeeCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 235 SMIDPPRAAVPDAVAKCRSA-GIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 235 ~l~D~lr~~a~~~I~~L~~~-Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
.+.++++++.++-++.|++. |++ .+++-||++....++ |+++|+...-..+.+...+++..+.+.++.+
T Consensus 16 ~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~ 94 (299)
T PLN02516 16 AIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNA 94 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45677888999999999877 776 467789999888776 5678988766666555555555566666543
No 196
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.83 E-value=17 Score=35.33 Aligned_cols=68 Identities=9% Similarity=0.174 Sum_probs=48.4
Q ss_pred eeCCCCCChHHHHHHHHhCC-Ce---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAG-IK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~G-i~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
+.+++|++.++.++.|++.| .+ ..++-||++.+..++ |+++|+...-..+..-..+++..+.+.++.+
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~ 88 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNL 88 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45678899999999998774 42 578899999887775 5678988765555555455555556655543
No 197
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=49.66 E-value=24 Score=32.06 Aligned_cols=39 Identities=26% Similarity=0.344 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTT 277 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~g 277 (492)
++.+++.+++++|++.|++++++||-....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467889999999999999999999999999998887643
No 198
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=48.32 E-value=13 Score=35.29 Aligned_cols=43 Identities=12% Similarity=0.096 Sum_probs=37.6
Q ss_pred eCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.++..|...++++++++.|+.++..||-.....+.+.++.+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~ 61 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLL 61 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCC
Confidence 3456788999999999999999999999999999998877653
No 199
>PTZ00174 phosphomannomutase; Provisional
Probab=48.16 E-value=21 Score=33.91 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=30.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIE 273 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia 273 (492)
++-+...++|+++++.|+++++.||-........-
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 47788899999999999999999999888666544
No 200
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=41.49 E-value=27 Score=33.34 Aligned_cols=35 Identities=14% Similarity=0.501 Sum_probs=25.8
Q ss_pred EEEEeeeCCCCC---------ChHHHHHHHHhC-CCeEEEEcCCC
Q psy11923 231 VGLMSMIDPPRA---------AVPDAVAKCRSA-GIKVIMVTGDH 265 (492)
Q Consensus 231 ~G~i~l~D~lr~---------~a~~~I~~L~~~-Gi~v~mlTGD~ 265 (492)
++.+.+.+|-+. +..++++.+.+. .++++++||..
T Consensus 15 v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g 59 (257)
T COG1024 15 IAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAG 59 (257)
T ss_pred EEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC
Confidence 788888887765 344555555544 89999999987
No 201
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.91 E-value=25 Score=34.10 Aligned_cols=64 Identities=14% Similarity=0.261 Sum_probs=44.4
Q ss_pred eCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
.++++++.++-++.+ |++ .+++.||++....++ |+++|+...-..+.+-..+++..+.+.++.+
T Consensus 9 a~~i~~~~~~~v~~l---g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~ 81 (279)
T PRK14178 9 SEKRLELLKEEIIES---GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNE 81 (279)
T ss_pred HHHHHHHHHHHHHHh---CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 345677777777777 776 578899999987776 5678988766666555555555566665543
No 202
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=40.85 E-value=33 Score=32.98 Aligned_cols=39 Identities=3% Similarity=0.037 Sum_probs=33.9
Q ss_pred CCCCChHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHhhcc
Q psy11923 239 PPRAAVPDAVAKCRS-AGIKVIMVTGDHPITAKIIEADTT 277 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~-~Gi~v~mlTGD~~~tA~~ia~~~g 277 (492)
.+-++..++|+.|++ .|++++++||-.......+.+..+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 455788999999998 799999999999999998887655
No 203
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=40.27 E-value=35 Score=32.11 Aligned_cols=42 Identities=17% Similarity=0.323 Sum_probs=30.8
Q ss_pred EEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIE 273 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia 273 (492)
|++.-.+.+=|++.++|+.+++.|++++++|-....+...++
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~ 48 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYA 48 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHH
Confidence 444445667789999999999999999999944434444333
No 204
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=40.21 E-value=77 Score=29.11 Aligned_cols=39 Identities=10% Similarity=-0.025 Sum_probs=30.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
-++.||++++++.| ++++.++|+.....+...=+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 45678999999998 4899999999887777665656654
No 205
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=40.08 E-value=1.3e+02 Score=27.61 Aligned_cols=78 Identities=6% Similarity=-0.054 Sum_probs=49.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc--cc----cccccCChhHHHHHHHHhhhhhhcccCCC
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ--SG----VQYDRTSPGFKALARIATLCNRAEFKGGQ 311 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~--~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 311 (492)
=++-+++.++++.|++. +++.++|=-........-+++|+.. +. .......|..+.+....+...-
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~------- 169 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGV------- 169 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCC-------
Confidence 36678888999999888 9999999877777777777777532 11 1223345555555444333221
Q ss_pred chhhcceeeeecCCc
Q psy11923 312 DGAIAKSVGIISEGN 326 (492)
Q Consensus 312 ~~~~~~~v~~~gd~~ 326 (492)
..+.+.++||..
T Consensus 170 ---~p~~~l~VgD~~ 181 (229)
T COG1011 170 ---PPEEALFVGDSL 181 (229)
T ss_pred ---CcceEEEECCCh
Confidence 134577888854
No 206
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=39.43 E-value=53 Score=30.54 Aligned_cols=43 Identities=14% Similarity=0.127 Sum_probs=38.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
.++.||+.+.++.|++.|+.+.+.|+-....+..+-+..|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4789999999999999999999999999888988888887653
No 207
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=39.28 E-value=33 Score=30.89 Aligned_cols=36 Identities=11% Similarity=-0.004 Sum_probs=29.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHh
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEA 274 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~ 274 (492)
.++|+-++.++.+++.+++++++|+--..-...+=.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe 108 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFE 108 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHH
Confidence 579999999999999999999998876655554433
No 208
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=38.56 E-value=45 Score=36.58 Aligned_cols=40 Identities=5% Similarity=0.080 Sum_probs=35.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
.-+.+.++|++|+++|+.+++.||-....+..+++++|++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3456799999999999999999999999999999998753
No 209
>PRK13743 conjugal transfer protein TrbF; Provisional
Probab=38.43 E-value=84 Score=26.34 Aligned_cols=19 Identities=16% Similarity=0.357 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHhcCchhH
Q psy11923 71 DAVIFLIGIIVANVPEGLL 89 (492)
Q Consensus 71 ~~~~~~i~vlv~~~P~aL~ 89 (492)
..+....-++..++|++|.
T Consensus 76 nn~rymWNilMYaIPy~L~ 94 (141)
T PRK13743 76 NNFRYMWNILMYVIPYTLW 94 (141)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 4577788889999999983
No 210
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=37.38 E-value=31 Score=28.44 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=25.6
Q ss_pred EeeeCC-CCCChHHHHHHHHhCCCeEEEEcCCCH
Q psy11923 234 MSMIDP-PRAAVPDAVAKCRSAGIKVIMVTGDHP 266 (492)
Q Consensus 234 i~l~D~-lr~~a~~~I~~L~~~Gi~v~mlTGD~~ 266 (492)
+.+... --++..++++.+|+.|++++.+|++.+
T Consensus 48 I~iS~SG~t~e~i~~~~~a~~~g~~iI~IT~~~~ 81 (119)
T cd05017 48 IAVSYSGNTEETLSAVEQAKERGAKIVAITSGGK 81 (119)
T ss_pred EEEECCCCCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 334433 346788899999999999999998874
No 211
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.18 E-value=31 Score=33.61 Aligned_cols=64 Identities=13% Similarity=0.173 Sum_probs=44.6
Q ss_pred eCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhhh
Q psy11923 237 IDPPRAAVPDAVAKCRSAGIK---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLCN 303 (492)
Q Consensus 237 ~D~lr~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~~ 303 (492)
..++|++.++-++.| |++ ..++.||++....++ |+++|+...-..+..-..++...+.+.++.+
T Consensus 9 A~~i~~~~k~~v~~l---~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~ 81 (287)
T PRK14181 9 AEHILATIKENISAS---STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNN 81 (287)
T ss_pred HHHHHHHHHHHHHHh---CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 455677788888887 555 578899999888776 5678988766666555555555556655543
No 212
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=36.91 E-value=56 Score=27.91 Aligned_cols=37 Identities=16% Similarity=0.244 Sum_probs=33.4
Q ss_pred CCcEEEEEEeeeCCCCCChHHHHHHHHhCCCeEEEEc
Q psy11923 226 TGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVT 262 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlT 262 (492)
.+.+-+++++++|.+...+-..-+.|+++|++|+=+-
T Consensus 14 ~~~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVN 50 (140)
T COG1832 14 KSAKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVN 50 (140)
T ss_pred HhCceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeC
Confidence 4567799999999999999999999999999988763
No 213
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=36.19 E-value=1.7e+02 Score=22.17 Aligned_cols=20 Identities=5% Similarity=0.120 Sum_probs=11.6
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q psy11923 36 IAKEIHHFIHIITGVAVFLG 55 (492)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~ 55 (492)
=|+.++++...+..+..+++
T Consensus 5 gQ~~ae~l~~~il~~~~iis 24 (76)
T PF06645_consen 5 GQRLAEKLMQYILIISAIIS 24 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 36677777666554444444
No 214
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=36.18 E-value=38 Score=32.77 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=44.9
Q ss_pred eeCCCCCChHHHHHHHHhCCC-e---EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGI-K---VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLC 302 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi-~---v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~ 302 (492)
+.++++.+.++-++.+++.+- + .+++-||++..-.++ |+++|+......+.+...+++.+..+.++.
T Consensus 8 lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN 84 (283)
T COG0190 8 LAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELN 84 (283)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhc
Confidence 345678888999999987544 3 678899999777776 567888765444444444444455555443
No 215
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=35.08 E-value=56 Score=28.68 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 246 DAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 246 ~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
+.=+.|++.|+..+++.||..+.-..+++++++..
T Consensus 57 ~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~ 91 (165)
T PF00875_consen 57 DLQESLRKLGIPLLVLRGDPEEVLPELAKEYGATA 91 (165)
T ss_dssp HHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTESE
T ss_pred HHHHHHHhcCcceEEEecchHHHHHHHHHhcCcCe
Confidence 44456677899999999999999999999999765
No 216
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=34.78 E-value=73 Score=28.42 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=30.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcC-CCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTG-DHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTG-D~~~tA~~ia~~~gi~ 279 (492)
.+-|++++.++.|++.|+++.+.|- |.++.|+.+=+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 3679999999999999999999995 8898888887777776
No 217
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=34.25 E-value=34 Score=33.39 Aligned_cols=43 Identities=26% Similarity=0.454 Sum_probs=32.9
Q ss_pred CCcEEEEEEeeeCCCCCChHHHHHHHHhCCCe-EEEEcCCCHHH
Q psy11923 226 TGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK-VIMVTGDHPIT 268 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~-v~mlTGD~~~t 268 (492)
.+...+--+..+|.-|.+..+.+..+++.||+ +..+|||.+..
T Consensus 69 ~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 69 TGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp TT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred hCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 35677888888898888899999999999998 99999998654
No 218
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=33.99 E-value=1.5e+02 Score=29.80 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=56.8
Q ss_pred HHHHHHHHhhcCceEEEeee--eccCCCCCCCCCccCCCCCCCCCCCcEEEEEEeee-CCCCCChHHHHHHHHhCCCe-E
Q psy11923 183 FNNAYYELGGLGERVLGFCD--LLLPADKFPLGFKFDCDEPNFPLTGMRFVGLMSMI-DPPRAAVPDAVAKCRSAGIK-V 258 (492)
Q Consensus 183 ~~~~~~~~~~~G~r~l~~a~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~l~-D~lr~~a~~~I~~L~~~Gi~-v 258 (492)
+...++.....|.+++++-+ .-+-+.++.+- . ......+...+++++|.-... .+..+....+++.|++.||+ .
T Consensus 21 Iravvr~a~~~g~eV~Gi~~Gy~GL~~~~i~~l-~-~~~v~~~~~~GGT~lgssR~~~~~~~e~~~~~~~~l~~~gId~L 98 (347)
T COG0205 21 IRAVVRTAIKEGLEVFGIYNGYLGLLEGDIKPL-T-REDVDDLINRGGTFLGSARFPEFKTEEGRKVAAENLKKLGIDAL 98 (347)
T ss_pred HHHHHHHHHHcCCEEEEEecchhhhcCCcceec-c-ccchhHHHhcCCeEEeeCCCCCcccHHHHHHHHHHHHHcCCCEE
Confidence 33344445555999988643 22222211110 0 011123445788999998887 45566678999999999999 8
Q ss_pred EEEcCCCHHHHHHH-Hhhc
Q psy11923 259 IMVTGDHPITAKII-EADT 276 (492)
Q Consensus 259 ~mlTGD~~~tA~~i-a~~~ 276 (492)
+++=||...+.... +++.
T Consensus 99 vvIGGDgS~~gA~~Lae~~ 117 (347)
T COG0205 99 VVIGGDGSYTGAALLAEEG 117 (347)
T ss_pred EEECCCChHHHHHHHHHhc
Confidence 88999987776643 4443
No 219
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=33.95 E-value=44 Score=30.15 Aligned_cols=24 Identities=33% Similarity=0.349 Sum_probs=21.8
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcC
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTG 263 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTG 263 (492)
+.|++.+++..|+++|++++|+|=
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC
Confidence 468899999999999999999984
No 220
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=33.84 E-value=47 Score=25.60 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=26.2
Q ss_pred EEEeeeCCC-CCChHHHHHHHHhCCCeEEEEcCC
Q psy11923 232 GLMSMIDPP-RAAVPDAVAKCRSAGIKVIMVTGD 264 (492)
Q Consensus 232 G~i~l~D~l-r~~a~~~I~~L~~~Gi~v~mlTGD 264 (492)
-.+.++-+= +++..+.++.|+++|+++..+|.|
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~ 75 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDD 75 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCC
Confidence 345666665 788999999999999998876655
No 221
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=33.83 E-value=32 Score=28.56 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=24.6
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 241 RAAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 241 r~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
-+++.++++.+|+.|++++.+|++....-.
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNSTLA 89 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCchh
Confidence 356789999999999999999997654444
No 222
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=33.34 E-value=1.9e+02 Score=28.36 Aligned_cols=122 Identities=18% Similarity=0.269 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhH---HHHHHHHhhhhhhcccCCCchhhcceeee
Q psy11923 245 PDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGF---KALARIATLCNRAEFKGGQDGAIAKSVGI 321 (492)
Q Consensus 245 ~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~---k~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 321 (492)
+++-+-|-+. +..+|.-|...++....|+..++. ++..++++. +.++.+....+.. +. -.+.++.+
T Consensus 90 ~DTArVLsr~-~D~I~~R~~~~~~ve~lA~~s~VP----ViNgLtD~~HP~Q~LADl~Ti~E~~---g~---l~g~k~a~ 158 (310)
T COG0078 90 KDTARVLSRM-VDAIMIRGFSHETLEELAKYSGVP----VINGLTDEFHPCQALADLMTIKEHF---GS---LKGLKLAY 158 (310)
T ss_pred HHHHHHHHhh-hheEEEecccHHHHHHHHHhCCCc----eEcccccccCcHHHHHHHHHHHHhc---Cc---ccCcEEEE
Confidence 3344444333 677999999999999999988876 333443332 2234443333321 10 23688999
Q ss_pred ecCCcccHHHHH---HhcCCccc-----ccChhh-----h--cceeeeeeeeccccchHHHHHhhchhccCC
Q psy11923 322 ISEGNETVEDIA---LRLNIPVS-----EVNPRE-----A--KAAVVHGSVAMGIAGSDVSKQAADMILLDD 378 (492)
Q Consensus 322 ~gd~~~~~~~~~---~~~~~~~d-----gvnd~~-----a--l~~a~~g~ia~g~~gs~~a~~aADivl~~~ 378 (492)
+||+.|-...+. ..+||... |..+.+ | .+...-|.+-+- ...+.|...||+|.+|-
T Consensus 159 vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~~~a~~~g~~i~~t-~d~~eAv~gADvvyTDv 229 (310)
T COG0078 159 VGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAKENAKESGGKITLT-EDPEEAVKGADVVYTDV 229 (310)
T ss_pred EcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHHHHHHhcCCeEEEe-cCHHHHhCCCCEEEecC
Confidence 999977666643 34565321 222211 1 122221235554 56666777999999874
No 223
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=33.17 E-value=45 Score=32.24 Aligned_cols=41 Identities=24% Similarity=0.521 Sum_probs=35.6
Q ss_pred CcEEEEEEeeeCCCCCChHHHHHHHHhCCCe-EEEEcCCCHH
Q psy11923 227 GMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK-VIMVTGDHPI 267 (492)
Q Consensus 227 ~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~-v~mlTGD~~~ 267 (492)
+...+--+...|.-|.+..+.+..++++|++ +..+|||.+.
T Consensus 58 g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 58 GIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred CCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 5667778888898888999999999999998 6679999984
No 224
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=33.09 E-value=1.6e+02 Score=26.03 Aligned_cols=38 Identities=16% Similarity=0.133 Sum_probs=31.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
+-| ..++++.|++. ++..++|+.....+..+-+..|+.
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 345 46899999875 899999999999999888888875
No 225
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=32.83 E-value=40 Score=29.65 Aligned_cols=23 Identities=30% Similarity=0.599 Sum_probs=20.3
Q ss_pred CCChHHHHHHHHhCCCeEEEEcC
Q psy11923 241 RAAVPDAVAKCRSAGIKVIMVTG 263 (492)
Q Consensus 241 r~~a~~~I~~L~~~Gi~v~mlTG 263 (492)
-+++++.+++|++.|.+++|+|=
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999984
No 226
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=32.70 E-value=3.8e+02 Score=26.64 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=39.0
Q ss_pred CCcEEEEEEeeeCCCCCChHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHh
Q psy11923 226 TGMRFVGLMSMIDPPRAAVPDAVAKCRSA---GIKVIMVTGDHPITAKIIEA 274 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~~~I~~L~~~---Gi~v~mlTGD~~~tA~~ia~ 274 (492)
.|+.=+=++.=...+-||..++++..+.. |..|...+-|++.+|++++.
T Consensus 165 ~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~ 216 (326)
T PRK11840 165 WDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED 216 (326)
T ss_pred CCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh
Confidence 44444445555566889999999999999 99998889999999997764
No 227
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=32.13 E-value=96 Score=27.50 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=32.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
++.+++.++++.|+ .+++++|.-+...+..+-+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 47789999999997 478999998888888888888874
No 228
>KOG2882|consensus
Probab=31.64 E-value=86 Score=30.60 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=37.0
Q ss_pred EEEeeeCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHh
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEA 274 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~ 274 (492)
|++...+.+=|++.|+++.|++.|.++..+|-..-.+-+...+
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~k 73 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMK 73 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHH
Confidence 6777889999999999999999998899999887777666554
No 229
>cd00537 MTHFR Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-methyltetrahydrofolate by methylenetetrahydrofolate reductase, a cytoplasmic, NAD(P)-dependent enzyme. 5-methyltetrahydrofolate is utilized by methionine synthase to convert homocysteine to methionine. The enzymatic mechanism is a ping-pong bi-bi mechanism, in which NAD(P)+ release precedes the binding of methylenetetrahydrofolate and the acceptor is free FAD. The family includes the 5,10-methylenetetrahydrofolate reductase EC:1.7.99.5 from prokaryotes and methylenetetrahydrofolate reductase EC: 1.5.1.20 from eukaryotes. The bacterial enzyme is a homotetramer and NADH is the preferred reductant while the eukaryotic enzyme is a homodimer and NADPH is the preferred reductant. In humans, there are several clinically significant mutations in MTHFR that result in hyperhomocysteinemia, which is a risk factor for the development of cardiovascular disease.
Probab=30.86 E-value=44 Score=32.27 Aligned_cols=43 Identities=19% Similarity=0.390 Sum_probs=36.5
Q ss_pred CcEEEEEEeeeCCCCCChHHHHHHHHhCCCe-EEEEcCCCHHHH
Q psy11923 227 GMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK-VIMVTGDHPITA 269 (492)
Q Consensus 227 ~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~-v~mlTGD~~~tA 269 (492)
+...+--+...|.-|.+..+.+..+++.|++ +.++|||.+...
T Consensus 58 g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~~iL~l~GD~~~~~ 101 (274)
T cd00537 58 GIEPIPHLTCRDRNRIELQSILLGAHALGIRNILALRGDPPKGG 101 (274)
T ss_pred CCCeeeecccCCCCHHHHHHHHHHHHHCCCCeEEEeCCCCCCCC
Confidence 4556777888888888999999999999998 999999998653
No 230
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=30.81 E-value=2.4e+02 Score=26.60 Aligned_cols=41 Identities=10% Similarity=0.184 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 239 PPRAAVPDAVAKC--RSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 239 ~lr~~a~~~I~~L--~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
|+.|+.++.++.+ ++.|++++++|.-|..--..+=+.-|+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5678899999999 4689999999999988888776666653
No 231
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=29.68 E-value=47 Score=27.39 Aligned_cols=29 Identities=21% Similarity=0.163 Sum_probs=23.7
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
++..++++.+|+.|.+++.+|+.....-.
T Consensus 60 ~e~~~~~~~a~~~g~~vi~iT~~~~s~la 88 (126)
T cd05008 60 ADTLAALRLAKEKGAKTVAITNVVGSTLA 88 (126)
T ss_pred HHHHHHHHHHHHcCCeEEEEECCCCChHH
Confidence 45889999999999999999997554433
No 232
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=29.49 E-value=27 Score=33.61 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=29.4
Q ss_pred cccccChhhhccee----eeeeeeccccchHHHHHhhchhccCCCchhHHhHHH
Q psy11923 339 PVSEVNPREAKAAV----VHGSVAMGIAGSDVSKQAADMILLDDNFASIVTGVE 388 (492)
Q Consensus 339 ~~dgvnd~~al~~a----~~g~ia~g~~gs~~a~~aADivl~~~~l~~l~~~i~ 388 (492)
.||+.||.++++.+ ..| |+|| ++.+ .|++.|. +...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~-vavg-~a~~----~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGIS-VKVG-TGAT----QASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeE-EEEC-CCCC----cCeEeCC--CHHHHHHHHH
Confidence 47888888888877 566 9999 6643 5777775 4666655554
No 233
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=29.34 E-value=1e+02 Score=23.40 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=25.2
Q ss_pred EEeeeCCCCCChHHHHHHHHhCCCeEEEE-cCCCH
Q psy11923 233 LMSMIDPPRAAVPDAVAKCRSAGIKVIMV-TGDHP 266 (492)
Q Consensus 233 ~i~l~D~lr~~a~~~I~~L~~~Gi~v~ml-TGD~~ 266 (492)
++.+.+..++.+.+..+.|++.|+++.+- .+.+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~ 40 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKL 40 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCH
Confidence 34455667888899999999999998883 44333
No 234
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=28.51 E-value=82 Score=31.21 Aligned_cols=48 Identities=23% Similarity=0.219 Sum_probs=38.3
Q ss_pred EEEeeeCCCCCChHHHHHHHHhC----CCeEEEEcCCC---H-HHHHHHHhhcccc
Q psy11923 232 GLMSMIDPPRAAVPDAVAKCRSA----GIKVIMVTGDH---P-ITAKIIEADTTED 279 (492)
Q Consensus 232 G~i~l~D~lr~~a~~~I~~L~~~----Gi~v~mlTGD~---~-~tA~~ia~~~gi~ 279 (492)
|++.-.+++-|++.++++.|++. |+++..+|=.. . ..+..+.++.|++
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 66777889999999999999998 99999998544 3 3356666777775
No 235
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.49 E-value=1.5e+02 Score=28.73 Aligned_cols=54 Identities=13% Similarity=0.219 Sum_probs=41.9
Q ss_pred CCcEEEEEEeeeCCCCCChH---HHHHHHHhCCCeEEEE-cCCCHHHHHHHHhhcccc
Q psy11923 226 TGMRFVGLMSMIDPPRAAVP---DAVAKCRSAGIKVIMV-TGDHPITAKIIEADTTED 279 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~---~~I~~L~~~Gi~v~ml-TGD~~~tA~~ia~~~gi~ 279 (492)
.+++.++.+..+..-.|..+ +.++.+|+.+++++.. +.-+..+++.|+++.|..
T Consensus 196 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~ 253 (286)
T cd01019 196 YGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGAK 253 (286)
T ss_pred cCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCce
Confidence 45677777777665556554 7888889999997666 777999999999998863
No 236
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=28.26 E-value=1.4e+02 Score=24.71 Aligned_cols=55 Identities=15% Similarity=0.219 Sum_probs=38.2
Q ss_pred CCcEEEEEEeeeCCCCCChHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHhhccccc
Q psy11923 226 TGMRFVGLMSMIDPPRAAVPDAVAKCRSAGI-KV-IMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi-~v-~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
.+-.++++-.......+.+++.++.|+++|. ++ +++-|-.+.--..-.++.|++.
T Consensus 49 ~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~ 105 (122)
T cd02071 49 EDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAE 105 (122)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCE
Confidence 4456777777778889999999999999988 44 5555544433334445778664
No 237
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=28.23 E-value=51 Score=29.77 Aligned_cols=27 Identities=26% Similarity=0.543 Sum_probs=21.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDH 265 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~ 265 (492)
++-|||.|++++|++.|..++++|.=.
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~ 99 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARP 99 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecC
Confidence 456899999999999998888777644
No 238
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=26.81 E-value=1.6e+02 Score=28.60 Aligned_cols=54 Identities=9% Similarity=0.141 Sum_probs=42.1
Q ss_pred CCcEEEEEEeeeCCCCCCh---HHHHHHHHhCCCeEEEE-cCCCHHHHHHHHhhcccc
Q psy11923 226 TGMRFVGLMSMIDPPRAAV---PDAVAKCRSAGIKVIMV-TGDHPITAKIIEADTTED 279 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a---~~~I~~L~~~Gi~v~ml-TGD~~~tA~~ia~~~gi~ 279 (492)
.+++.+|.+.+...-.|.. .+.++.+|+.|++++.. .+-+...+..+|+++|..
T Consensus 194 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 194 YGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred cCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 4677788877766666655 67788889999996655 777888999999999875
No 239
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=26.77 E-value=57 Score=26.95 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=28.4
Q ss_pred EEeeeCC-CCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 233 LMSMIDP-PRAAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 233 ~i~l~D~-lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
++.+... --++..++++.+|+.|.+++.+|+.....-.
T Consensus 51 ~I~iS~SG~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (120)
T cd05710 51 VILASHSGNTKETVAAAKFAKEKGATVIGLTDDEDSPLA 89 (120)
T ss_pred EEEEeCCCCChHHHHHHHHHHHcCCeEEEEECCCCCcHH
Confidence 3444443 3467889999999999999999997765544
No 240
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=26.65 E-value=9.5e+02 Score=27.01 Aligned_cols=135 Identities=10% Similarity=0.039 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhcCCceecchhHHH
Q psy11923 39 EIHHFIHIITGVAVFLGVSFFIIAFALGYH-WLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVE 117 (492)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~vlv~~~P~aL~~a~~~~~~~~~~~~~k~gilvk~~~~le 117 (492)
.+++.+..+....+.+.++..++.++.+.. ....+..++...+...-++.|-++|++...+.... ..
T Consensus 198 ~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g------------~~ 265 (755)
T TIGR01647 198 HLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVG------------AA 265 (755)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHH------------HH
Confidence 456666666655555444433333322211 11334556666666666777888888888777543 34
Q ss_pred hhcCccEEEcCCCCccCCCceEEE--cCC----CCceE---EEEeC---ChHHHHHhccccccCCeeccCCHHHHHHHHH
Q psy11923 118 TLGSTSTICSDKTGTLTQNRMTTE--DPN----DPRHL---EVMKG---APERILDKCSTIFINGKEKVLDEEMREAFNN 185 (492)
Q Consensus 118 ~lg~v~~i~~DKTGTLT~~~~~v~--~~~----~~~~~---~~~kG---a~e~il~~~~~~~~~~~~~~l~~~~~~~~~~ 185 (492)
++++-..++-+-.--=|-|.+.+. +.. .++.. ++..+ +++.++..+.......+.||++.++.+...+
T Consensus 266 r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~ 345 (755)
T TIGR01647 266 ELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKD 345 (755)
T ss_pred HHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHH
Confidence 455555555432222233333332 111 11111 11111 3445555443222356789999998876543
No 241
>PRK09432 metF 5,10-methylenetetrahydrofolate reductase; Provisional
Probab=26.40 E-value=60 Score=31.85 Aligned_cols=41 Identities=20% Similarity=0.400 Sum_probs=34.8
Q ss_pred CcEEEEEEeeeCCCCCChHHHHHHHHhCCCe-EEEEcCCCHH
Q psy11923 227 GMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK-VIMVTGDHPI 267 (492)
Q Consensus 227 ~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~-v~mlTGD~~~ 267 (492)
+...+--+...|.-|.+..+.+..++++||+ +..|+||.+.
T Consensus 82 g~~~i~Hltcr~~n~~~l~~~L~~~~~~GI~niLaLrGD~p~ 123 (296)
T PRK09432 82 GLEAAPHLTCIDATPDELRTIAKDYWNNGIRHIVALRGDLPP 123 (296)
T ss_pred CCCeeeecccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4566677778888888999999999999997 9999999764
No 242
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase, eukaryotic type. This protein is an FAD-containing flavoprotein.
Probab=26.34 E-value=65 Score=31.32 Aligned_cols=41 Identities=24% Similarity=0.466 Sum_probs=35.2
Q ss_pred CcEEEEEEeeeCCCCCChHHHHHHHHhCCCe-EEEEcCCCHH
Q psy11923 227 GMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK-VIMVTGDHPI 267 (492)
Q Consensus 227 ~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~-v~mlTGD~~~ 267 (492)
+...+--+...|.-|.+..+.+..++++||+ +..+|||.+.
T Consensus 59 g~~~i~Hltcr~~~~~~l~~~L~~~~~~Gi~niLal~GD~p~ 100 (281)
T TIGR00677 59 GVETCMHLTCTNMPIEMIDDALERAYSNGIQNILALRGDPPH 100 (281)
T ss_pred CCCeeEEeccCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 4566777788888888899999999999998 8899999973
No 243
>KOG0209|consensus
Probab=25.98 E-value=63 Score=36.02 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=22.7
Q ss_pred CCCchhHHhHHHhhhhHHHHHHHHHHHH
Q psy11923 377 DDNFASIVTGVEEGRLIFDNLKKSIAYT 404 (492)
Q Consensus 377 ~~~l~~l~~~i~~gR~~~~~i~~~~~~~ 404 (492)
-.+++++-+.|+-||.+.-+.-|.+.+.
T Consensus 919 ~asv~~v~~IIrQGRctLVtTlQMfKIL 946 (1160)
T KOG0209|consen 919 LASVSSVTHIIRQGRCTLVTTLQMFKIL 946 (1160)
T ss_pred cchHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 3468899999999999998877777654
No 244
>PHA02597 30.2 hypothetical protein; Provisional
Probab=25.95 E-value=2.8e+02 Score=24.72 Aligned_cols=39 Identities=10% Similarity=0.058 Sum_probs=26.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccc
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi 278 (492)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999985 5666666444444434444444
No 245
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=25.88 E-value=1.3e+02 Score=28.69 Aligned_cols=35 Identities=23% Similarity=0.499 Sum_probs=23.2
Q ss_pred EEEEeeeCCCC---------CChHHHHHHHHhCCCeEEEEcCCCH
Q psy11923 231 VGLMSMIDPPR---------AAVPDAVAKCRSAGIKVIMVTGDHP 266 (492)
Q Consensus 231 ~G~i~l~D~lr---------~~a~~~I~~L~~~Gi~v~mlTGD~~ 266 (492)
++.+.+.+|-+ .+..++++.+. ..++++++||..+
T Consensus 12 v~~itlnrp~~~Nal~~~~~~~l~~al~~~~-~~vr~vvltg~g~ 55 (255)
T PRK08150 12 VATIGLNRPAKRNALNDGLIAALRAAFARLP-EGVRAVVLHGEGD 55 (255)
T ss_pred EEEEEEcCCccccCCCHHHHHHHHHHHHHhh-cCCeEEEEECCCC
Confidence 45555655544 34456666665 7899999999763
No 246
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=25.17 E-value=2.1e+02 Score=26.67 Aligned_cols=28 Identities=11% Similarity=0.133 Sum_probs=22.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHH
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPI 267 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~ 267 (492)
++-||+.++++.|++. +++.++|.-+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4668999999999975 888888886554
No 247
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=25.12 E-value=93 Score=28.79 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=44.7
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccccccccccCChhHH
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGFK 293 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~k 293 (492)
.|.+..|+.|++.|+- +++|--|......||..+=|..+|..++.-+|++-
T Consensus 176 ~dIq~iI~~L~~rgiG-vLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei 226 (243)
T COG1137 176 IDIQRIIKHLKDRGIG-VLITDHNVRETLDICDRAYIISDGKVLAEGSPEEI 226 (243)
T ss_pred HHHHHHHHHHHhCCce-EEEccccHHHHHhhhheEEEEecCeEEecCCHHHH
Confidence 4678999999999998 57899999999999999999999988888888764
No 248
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=24.84 E-value=58 Score=30.59 Aligned_cols=29 Identities=28% Similarity=0.418 Sum_probs=24.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHH
Q psy11923 239 PPRAAVPDAVAKCRSAGIKVIMVTGDHPI 267 (492)
Q Consensus 239 ~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~ 267 (492)
+.=|++.+.++.+++.|++|..+||-++.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 34478899999999999999999995544
No 249
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=24.41 E-value=1e+02 Score=25.28 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=27.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKII 272 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~i 272 (492)
..-.++..+.++.+|+.|.+++.+|+.........
T Consensus 63 sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~ 97 (131)
T PF01380_consen 63 SGETRELIELLRFAKERGAPVILITSNSESPLARL 97 (131)
T ss_dssp SSTTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHH
T ss_pred cccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhh
Confidence 44557788899999999999999998666555433
No 250
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=24.31 E-value=1.2e+02 Score=30.53 Aligned_cols=37 Identities=14% Similarity=0.060 Sum_probs=33.9
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhc-c
Q psy11923 241 RAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADT-T 277 (492)
Q Consensus 241 r~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~-g 277 (492)
-|++++.++.|+++|+++.++|.-....+..+-+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999888875 5
No 251
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=24.01 E-value=60 Score=23.03 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=18.0
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCH
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHP 266 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~ 266 (492)
|+-++.++.|.++|++|.|.|-+.-
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHHH
Confidence 4557899999999999999987643
No 252
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=23.97 E-value=1.2e+02 Score=29.97 Aligned_cols=57 Identities=14% Similarity=0.213 Sum_probs=36.9
Q ss_pred CCCCCcEEEEEEeeeCCCC-----C--------------------ChHHHHHHHHhCCCe-EEEEcCC-CHHHHHHHHhh
Q psy11923 223 FPLTGMRFVGLMSMIDPPR-----A--------------------AVPDAVAKCRSAGIK-VIMVTGD-HPITAKIIEAD 275 (492)
Q Consensus 223 ~~~~~~~~~G~i~l~D~lr-----~--------------------~a~~~I~~L~~~Gi~-v~mlTGD-~~~tA~~ia~~ 275 (492)
..+.++.=+|++++..+-- | .+++.+++||+.|++ +++||-- .......+|++
T Consensus 150 I~e~~G~kIGviGltt~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~Lr~~gvD~II~LsH~g~~~~d~~lA~~ 229 (313)
T cd08162 150 VVEVGGEKIGVVGATTPTLPSISSPGGVTVNPDDTADMQALAAVEQIQPSIDALTAQGINKIILLSHLQQISIEQALAAL 229 (313)
T ss_pred EEEECCEEEEEEEecccchhhccCCCCceecccccccchhhhHHHHHHHHHHHHHHCCCCEEEEEecccccchHHHHHhc
Confidence 3456777788887754411 1 167889999999998 5555654 23445678877
Q ss_pred c-ccc
Q psy11923 276 T-TED 279 (492)
Q Consensus 276 ~-gi~ 279 (492)
+ |||
T Consensus 230 v~gID 234 (313)
T cd08162 230 LSGVD 234 (313)
T ss_pred CCCCC
Confidence 6 444
No 253
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=23.83 E-value=65 Score=28.92 Aligned_cols=21 Identities=24% Similarity=0.545 Sum_probs=17.5
Q ss_pred eeccccchHHHHHhhchhccCCC
Q psy11923 357 VAMGIAGSDVSKQAADMILLDDN 379 (492)
Q Consensus 357 ia~g~~gs~~a~~aADivl~~~~ 379 (492)
.++| .|.+.+. ++|++++.++
T Consensus 103 ~a~g-~G~~la~-~~D~~i~~~~ 123 (195)
T cd06558 103 AALG-GGLELAL-ACDIRIAAED 123 (195)
T ss_pred eeec-HHHHHHH-hCCEEEecCC
Confidence 7888 7888886 8999999876
No 254
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.66 E-value=67 Score=31.30 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=43.8
Q ss_pred eeCCCCCChHHHHHHHHhCCCe-EEEEcCCCHHHHHHH------HhhccccccccccccCChhHHHHHHHHhhh
Q psy11923 236 MIDPPRAAVPDAVAKCRSAGIK-VIMVTGDHPITAKII------EADTTEDQSGVQYDRTSPGFKALARIATLC 302 (492)
Q Consensus 236 l~D~lr~~a~~~I~~L~~~Gi~-v~mlTGD~~~tA~~i------a~~~gi~~~~~~~~~~~~~~k~~~~~~~~~ 302 (492)
+.+.+|++.++-++.|+.. -+ .+++-||++....++ |+++|+...-..+.+-..+++....+.++.
T Consensus 11 vA~~i~~~l~~~v~~l~~~-P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN 83 (287)
T PRK14173 11 AAEAVYAELRARLAKLPFV-PHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLN 83 (287)
T ss_pred HHHHHHHHHHHHHHHhCCC-CcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 4456777778888877421 22 577899999888776 567888876656655555555555555554
No 255
>KOG0206|consensus
Probab=23.00 E-value=50 Score=38.50 Aligned_cols=41 Identities=24% Similarity=0.227 Sum_probs=28.0
Q ss_pred ccccCChhHHHHHHHHhhhhhhcccCCCchhhcceeeeecCCcccHHHHHHh
Q psy11923 284 QYDRTSPGFKALARIATLCNRAEFKGGQDGAIAKSVGIISEGNETVEDIALR 335 (492)
Q Consensus 284 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~~~~~~~~~~~ 335 (492)
.-.+.+|-+|+ .+.++.++ .......-+|||.||+.+++++
T Consensus 773 iCCR~sPlQKA--~Vv~lVk~---------~~~~~TLAIGDGANDVsMIQ~A 813 (1151)
T KOG0206|consen 773 ICCRVSPLQKA--LVVKLVKK---------GLKAVTLAIGDGANDVSMIQEA 813 (1151)
T ss_pred EEccCCHHHHH--HHHHHHHh---------cCCceEEEeeCCCccchheeeC
Confidence 45688999996 34444432 2244555689999999999854
No 256
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=22.75 E-value=1.3e+02 Score=28.54 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccccc
Q psy11923 245 PDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTEDQ 280 (492)
Q Consensus 245 ~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~~ 280 (492)
++.|++|++.|+.|+=++-|.-.+=...-+++||..
T Consensus 199 ~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 199 KNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 678999999999999999999999899999999875
No 257
>COG0685 MetF 5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism]
Probab=22.72 E-value=60 Score=31.78 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=34.0
Q ss_pred EEEEEeeeCCCCCChHHHHHHHHhCCCe-EEEEcCCCH
Q psy11923 230 FVGLMSMIDPPRAAVPDAVAKCRSAGIK-VIMVTGDHP 266 (492)
Q Consensus 230 ~~G~i~l~D~lr~~a~~~I~~L~~~Gi~-v~mlTGD~~ 266 (492)
.+--+...|.-|.+..+.++.+.+.|++ +..||||.+
T Consensus 80 ~i~Hltc~d~n~~~i~~~l~~~~~~Gi~~ilaLrGDpp 117 (291)
T COG0685 80 PIPHLTCRDRNRIEIISILKGAAALGIRNILALRGDPP 117 (291)
T ss_pred cceeecccCCCHHHHHHHHHHHHHhCCceEEEecCCCC
Confidence 6677888899999999999999999997 999999997
No 258
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=22.67 E-value=89 Score=27.04 Aligned_cols=38 Identities=11% Similarity=0.076 Sum_probs=31.0
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi 278 (492)
+||++.+.++.|.+. +++++.|.-.+..|..+.+.++.
T Consensus 37 ~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 37 LRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp E-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred eCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhh
Confidence 399999999999555 99999999999999999888764
No 259
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=22.64 E-value=2.1e+02 Score=28.28 Aligned_cols=54 Identities=7% Similarity=0.107 Sum_probs=41.9
Q ss_pred CCcEEEEEEeeeCCCCCChH---HHHHHHHhCCCeEEEE-cCCCHHHHHHHHhhcccc
Q psy11923 226 TGMRFVGLMSMIDPPRAAVP---DAVAKCRSAGIKVIMV-TGDHPITAKIIEADTTED 279 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~---~~I~~L~~~Gi~v~ml-TGD~~~tA~~ia~~~gi~ 279 (492)
.+++.+|.+.....-.|..+ +.++.+|+.+++++.. ..-++..++.+++++|..
T Consensus 220 ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~e~g~~ 277 (311)
T PRK09545 220 YGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVIESVAKGTSVR 277 (311)
T ss_pred CCCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCe
Confidence 46677787777766666654 4888899999996664 677889999999998864
No 260
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=22.63 E-value=2.2e+02 Score=27.47 Aligned_cols=54 Identities=11% Similarity=0.231 Sum_probs=41.5
Q ss_pred CCcEEEEEEeeeCCCCCCh---HHHHHHHHhCCCeEEEE-cCCCHHHHHHHHhhcccc
Q psy11923 226 TGMRFVGLMSMIDPPRAAV---PDAVAKCRSAGIKVIMV-TGDHPITAKIIEADTTED 279 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a---~~~I~~L~~~Gi~v~ml-TGD~~~tA~~ia~~~gi~ 279 (492)
.+++.+|.......-.|.. .+.++.+|+.|++++.. ..-+..++..+|+++|..
T Consensus 188 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~ 245 (282)
T cd01017 188 YGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAK 245 (282)
T ss_pred CCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCc
Confidence 4677788777755555554 67788889999996666 777889999999998864
No 261
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=22.18 E-value=1.2e+02 Score=22.80 Aligned_cols=45 Identities=13% Similarity=0.109 Sum_probs=29.2
Q ss_pred EEeeeCCCCCChHHHHHHHHhCCCeEEEEcC-CCHHHHHHHHhhcc
Q psy11923 233 LMSMIDPPRAAVPDAVAKCRSAGIKVIMVTG-DHPITAKIIEADTT 277 (492)
Q Consensus 233 ~i~l~D~lr~~a~~~I~~L~~~Gi~v~mlTG-D~~~tA~~ia~~~g 277 (492)
++.+.++.++.+.+..+.|+++|+++.+.-. .+..-...-|+..|
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~ 51 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSG 51 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcC
Confidence 3445566777888899999999999877443 34444444444433
No 262
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=22.11 E-value=52 Score=30.76 Aligned_cols=35 Identities=14% Similarity=0.026 Sum_probs=29.6
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHhhcccc
Q psy11923 244 VPDAVAKCRSAGIKVIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 244 a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
..++++ ++++|+++++.||-....+..+.+++++.
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 445665 68999999999999999999999888753
No 263
>KOG0541|consensus
Probab=22.03 E-value=1.5e+02 Score=25.93 Aligned_cols=38 Identities=16% Similarity=0.286 Sum_probs=32.4
Q ss_pred CChHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHhhcccc
Q psy11923 242 AAVPDAVAKCRSAGIK-VIMVTGDHPITAKIIEADTTED 279 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~-v~mlTGD~~~tA~~ia~~~gi~ 279 (492)
|+-.+-.++|+..||. ++.+|.|++-.-.+=++.+|..
T Consensus 65 PGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~ 103 (171)
T KOG0541|consen 65 PGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGAN 103 (171)
T ss_pred chHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCcc
Confidence 5566788999999998 8999999999999888888654
No 264
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=21.86 E-value=2.6e+02 Score=27.16 Aligned_cols=159 Identities=11% Similarity=0.007 Sum_probs=91.7
Q ss_pred CCceecchhHHHhhcCccEEEc--CCCCccCCCceEEEcCCCCceEEEEeCChHHHHHhcccc--ccCCeeccCCHHHHH
Q psy11923 106 KNCLVKNLEAVETLGSTSTICS--DKTGTLTQNRMTTEDPNDPRHLEVMKGAPERILDKCSTI--FINGKEKVLDEEMRE 181 (492)
Q Consensus 106 ~gilvk~~~~le~lg~v~~i~~--DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il~~~~~~--~~~~~~~~l~~~~~~ 181 (492)
.|-++-|+..+|.|.+--..+. |.-.-+..|. ...+-.=|.+.++.+..... ..-+..-|+- .
T Consensus 37 lG~iVHN~~Vv~~L~~~Gv~~v~~~~~~~v~~~~---------~ViirAHGv~~~~~~~~~~~g~~viDaTCP~V----~ 103 (281)
T PRK12360 37 LGPLIHNNQVVSDLEEKGVKTIEESEIDSLKEGD---------VVIIRSHGVSKKVYKDLKDKGLEIIDATCPFV----K 103 (281)
T ss_pred ecCCcCCHHHHHHHHHCcCEEECcCchhhCCCCC---------EEEEeCCCCCHHHHHHHHHCCCeEEeCCCccc----h
Confidence 4667889999999988777777 5433333232 22223346676666654321 1112233443 3
Q ss_pred HHHHHHHHHhhcCceEEEeeeeccCCCCCCCCCccCC-------CCCCCCCCCcEEEEEEeeeCCCCCChHHHHHHHHhC
Q psy11923 182 AFNNAYYELGGLGERVLGFCDLLLPADKFPLGFKFDC-------DEPNFPLTGMRFVGLMSMIDPPRAAVPDAVAKCRSA 254 (492)
Q Consensus 182 ~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~G~i~l~D~lr~~a~~~I~~L~~~ 254 (492)
.+.+..+++..+|+.++-++.+..++-.-..++..+. ++...+. ...-++++.-.-..+++..+.++.|++.
T Consensus 104 k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~~~kv~~vsQTT~~~~~~~~iv~~l~~~ 182 (281)
T PRK12360 104 KIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEVENIP-FLDKACVVAQTTIIPELWEDILNVIKLK 182 (281)
T ss_pred HHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHHhhCc-cccCEEEEECCCCcHHHHHHHHHHHHHh
Confidence 4556677888899998887765444321111110000 0000010 1133667777777788888999999877
Q ss_pred CCeE------EEEcCCCHHHHHHHHhhccc
Q psy11923 255 GIKV------IMVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 255 Gi~v------~mlTGD~~~tA~~ia~~~gi 278 (492)
.-++ .--|-++++.++.+|++++.
T Consensus 183 ~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~ 212 (281)
T PRK12360 183 SKELVFFNTICSATKKRQESAKELSKEVDV 212 (281)
T ss_pred CcccccCCCcchhhhhHHHHHHHHHHhCCE
Confidence 5544 33478888888888887754
No 265
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=21.66 E-value=5.8e+02 Score=25.04 Aligned_cols=160 Identities=9% Similarity=0.037 Sum_probs=95.4
Q ss_pred CCceecchhHHHhhcCccEEEcCCCCccCCCceEEEcCCCCceEEEEeCChHHHHHhcccc--ccCCeeccCCHHHHHHH
Q psy11923 106 KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTTEDPNDPRHLEVMKGAPERILDKCSTI--FINGKEKVLDEEMREAF 183 (492)
Q Consensus 106 ~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~kGa~e~il~~~~~~--~~~~~~~~l~~~~~~~~ 183 (492)
.|-++-|+..++.|.+--..+.|...-+..|. ...+-.=|.+.++.+....- ..-+..-|+- ..+
T Consensus 36 lG~iIHN~~vv~~L~~~GV~~v~~~~~v~~~~---------~ViirAHGv~~~~~~~~~~~g~~viDaTCP~V----~k~ 102 (298)
T PRK01045 36 RHEIVHNRYVVERLEKKGAIFVEELDEVPDGA---------IVIFSAHGVSPAVREEAKERGLTVIDATCPLV----TKV 102 (298)
T ss_pred EecCccCHHHHHHHHHCCCEEecCcccCCCCC---------EEEEeCCCCCHHHHHHHHHCCCeEEeCCCccc----hHH
Confidence 46688999999999888887777543333232 22233346676666654321 1112233443 445
Q ss_pred HHHHHHHhhcCceEEEeeeeccCCCCCCCCCccC-------CCCCCCCC-CCcEEEEEEeeeCCCCCChHHHHHHHHhCC
Q psy11923 184 NNAYYELGGLGERVLGFCDLLLPADKFPLGFKFD-------CDEPNFPL-TGMRFVGLMSMIDPPRAAVPDAVAKCRSAG 255 (492)
Q Consensus 184 ~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~-------~~~~~~~~-~~~~~~G~i~l~D~lr~~a~~~I~~L~~~G 255 (492)
.+.++++..+|+.++-++.+..++-.-..++... .++...+. .+..-++++.-.-..+++..+.++.|++..
T Consensus 103 ~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~ 182 (298)
T PRK01045 103 HKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALKERF 182 (298)
T ss_pred HHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhC
Confidence 5677788889999888776554432111111000 00001111 123457777777778888899999998875
Q ss_pred CeEE--------EEcCCCHHHHHHHHhhccc
Q psy11923 256 IKVI--------MVTGDHPITAKIIEADTTE 278 (492)
Q Consensus 256 i~v~--------mlTGD~~~tA~~ia~~~gi 278 (492)
-++. --|-++++.++.+|++++.
T Consensus 183 ~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~ 213 (298)
T PRK01045 183 PEIQGPPKDDICYATQNRQEAVKELAPQADL 213 (298)
T ss_pred cCcccCCCCCcchhhHHHHHHHHHHHhhCCE
Confidence 4433 3588999999999987753
No 266
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=21.64 E-value=74 Score=26.32 Aligned_cols=29 Identities=21% Similarity=0.239 Sum_probs=23.9
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHPITAK 270 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~ 270 (492)
++..+.++.+++.|++++.+|++....-.
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~l~ 102 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSPLA 102 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChhH
Confidence 46788999999999999999998764433
No 267
>PF11181 YflT: Heat induced stress protein YflT
Probab=21.64 E-value=68 Score=25.83 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=26.1
Q ss_pred CCChHHHHHHHHhCCCe---EEEEcCCCHHHHHHHHhhc
Q psy11923 241 RAAVPDAVAKCRSAGIK---VIMVTGDHPITAKIIEADT 276 (492)
Q Consensus 241 r~~a~~~I~~L~~~Gi~---v~mlTGD~~~tA~~ia~~~ 276 (492)
..++.+.|+.|+++|+. ++++|=|+..+- .++...
T Consensus 9 ~~E~~~~I~~L~~~Gy~~ddI~Vva~d~~~~~-~l~~~t 46 (103)
T PF11181_consen 9 EEEALSAIEELKAQGYSEDDIYVVAKDKDRTE-RLADQT 46 (103)
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEEcCchHHH-HHHHhc
Confidence 35788999999999996 999997776553 344333
No 268
>KOG3167|consensus
Probab=21.48 E-value=60 Score=27.56 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=26.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q psy11923 238 DPPRAAVPDAVAKCRSAGIKVIMVTGDHPIT 268 (492)
Q Consensus 238 D~lr~~a~~~I~~L~~~Gi~v~mlTGD~~~t 268 (492)
+.+|.|+++..+++++.-.-+.+++||-...
T Consensus 58 k~lrrGvKevqK~vrkGeKGl~VlAgd~sPi 88 (153)
T KOG3167|consen 58 KGLRRGVKEVQKRVRKGEKGLCVLAGDTSPI 88 (153)
T ss_pred hhHHHHHHHHHHHHhcCCcceEEEecCCccH
Confidence 4589999999999999877799999997543
No 269
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.30 E-value=1.2e+02 Score=28.89 Aligned_cols=54 Identities=28% Similarity=0.322 Sum_probs=36.5
Q ss_pred CCCCCCh-HHHHHHHHhC-CCeEEEEcCCCHHHHHHHHhhccccccccccccCChhH
Q psy11923 238 DPPRAAV-PDAVAKCRSA-GIKVIMVTGDHPITAKIIEADTTEDQSGVQYDRTSPGF 292 (492)
Q Consensus 238 D~lr~~a-~~~I~~L~~~-Gi~v~mlTGD~~~tA~~ia~~~gi~~~~~~~~~~~~~~ 292 (492)
||+..++ -+.|.+|+++ |..++|+|-|-. ++..||...-+..++.....-++++
T Consensus 177 DPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~gkv~~~Gt~~e 232 (263)
T COG1127 177 DPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLADGKVIAEGTPEE 232 (263)
T ss_pred CcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeCCEEEEeCCHHH
Confidence 5555544 5778888755 999999999965 5666777776665555555544443
No 270
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=21.23 E-value=2.4e+02 Score=26.68 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=17.2
Q ss_pred eeCCCCCC-hHHHHHHHHhCCCeEEEE-cCC
Q psy11923 236 MIDPPRAA-VPDAVAKCRSAGIKVIMV-TGD 264 (492)
Q Consensus 236 l~D~lr~~-a~~~I~~L~~~Gi~v~ml-TGD 264 (492)
+.++-.++ ..+.-+.|++.|+++.++ |++
T Consensus 124 ~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~ 154 (247)
T PF05116_consen 124 VDPDDSADILEEIRARLRQRGLRVNVIYSNG 154 (247)
T ss_dssp EETTSHCHHHHHHHHHHHCCTCEEEEEECTC
T ss_pred EecccchhHHHHHHHHHHHcCCCeeEEEccc
Confidence 33433344 445555678899998766 443
No 271
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=20.93 E-value=3.2e+02 Score=25.69 Aligned_cols=25 Identities=24% Similarity=0.395 Sum_probs=18.0
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCH
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHP 266 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~ 266 (492)
.+..++++.+.+..++++++||..+
T Consensus 30 ~~l~~al~~~~~~~vr~vvl~g~g~ 54 (243)
T PRK07854 30 EELREAVRKAVDESARAIVLTGQGT 54 (243)
T ss_pred HHHHHHHHHHhcCCceEEEEECCCC
Confidence 3445666666666899999999753
No 272
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=20.72 E-value=82 Score=27.99 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=26.8
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHPITAKIIE 273 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~~tA~~ia 273 (492)
--+++.+.++.+|+.|++++.+|+.........|
T Consensus 84 ~t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~~a 117 (179)
T TIGR03127 84 ETESLVTVAKKAKEIGATVAAITTNPESTLGKLA 117 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCchHHhC
Confidence 3566788888899999999999998766555444
No 273
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=20.66 E-value=1.6e+02 Score=31.52 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=32.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHhhcccc
Q psy11923 240 PRAAVPDAVAKCRSAGIKVIMVTGDHP------------ITAKIIEADTTED 279 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~v~mlTGD~~------------~tA~~ia~~~gi~ 279 (492)
+-|++++.++.|++.|++++++|-=.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997444 3466677777765
No 274
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=20.64 E-value=2e+02 Score=24.50 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=26.8
Q ss_pred CCCChHHHHHHHHhCCCe-EEEE----cCCCHHHHHHHH
Q psy11923 240 PRAAVPDAVAKCRSAGIK-VIMV----TGDHPITAKIIE 273 (492)
Q Consensus 240 lr~~a~~~I~~L~~~Gi~-v~ml----TGD~~~tA~~ia 273 (492)
++|++.++++.|.+.|++ +.++ .-|+.+|-..+.
T Consensus 75 l~P~~~~~l~~l~~~G~~~i~v~p~gF~~D~~Etl~di~ 113 (135)
T cd00419 75 LEPSTDDALEELAKEGVKNVVVVPIGFVSDHLETLYELD 113 (135)
T ss_pred CCCCHHHHHHHHHHcCCCeEEEECCccccccHHHHHHHH
Confidence 578999999999999987 5554 458888877553
No 275
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=20.53 E-value=3.9e+02 Score=22.78 Aligned_cols=66 Identities=15% Similarity=0.144 Sum_probs=41.7
Q ss_pred CCcEEEEEEeeeCCCCCChHHHHHHHHhCCCe--EEEEcCCC------HHHHHHHHhhccccccccccccCChhHHH
Q psy11923 226 TGMRFVGLMSMIDPPRAAVPDAVAKCRSAGIK--VIMVTGDH------PITAKIIEADTTEDQSGVQYDRTSPGFKA 294 (492)
Q Consensus 226 ~~~~~~G~i~l~D~lr~~a~~~I~~L~~~Gi~--v~mlTGD~------~~tA~~ia~~~gi~~~~~~~~~~~~~~k~ 294 (492)
.+-.++|+=++.=.--+..+++++.|+++|.+ ++++=|-- ...-+.-.+++|.+. .|..-+|-+..
T Consensus 51 ~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~~---vF~pgt~~~~i 124 (134)
T TIGR01501 51 TKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFDR---VFAPGTPPEVV 124 (134)
T ss_pred cCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCCE---EECcCCCHHHH
Confidence 34557777777767777789999999999984 56666631 111233467778654 55555454443
No 276
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=20.21 E-value=63 Score=30.90 Aligned_cols=25 Identities=8% Similarity=0.292 Sum_probs=18.2
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCH
Q psy11923 242 AAVPDAVAKCRSAGIKVIMVTGDHP 266 (492)
Q Consensus 242 ~~a~~~I~~L~~~Gi~v~mlTGD~~ 266 (492)
.+..++++.+++..++++++||..+
T Consensus 36 ~~l~~~l~~~~d~~vrvvvl~g~g~ 60 (260)
T PRK07659 36 KELLQALKEVAESSAHIVVLRGNGR 60 (260)
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCC
Confidence 3445666666667899999999754
Done!